##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM226608v2 #!genome-build-accession NCBI_Assembly:GCF_002266085.2 #!annotation-date 03/26/2026 10:55:37 #!annotation-source NCBI RefSeq GCF_002266085.2-RS_2026_03_26 ##sequence-region NZ_CP075113.1 1 4843563 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=98360 NZ_CP075113.1 RefSeq region 1 4843563 . + . ID=NZ_CP075113.1:1..4843563;Dbxref=taxon:98360;Is_circular=true;Name=ANONYMOUS;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=chromosome;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Dublin;strain=CFSAN059898;sub-species=enterica NZ_CP075113.1 RefSeq gene 1 1401 . + . ID=gene-CCO47_RS00005;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=CCO47_RS00005;old_locus_tag=CCO47_00005 NZ_CP075113.1 Protein Homology CDS 1 1401 . + 0 ID=cds-WP_000059090.1;Parent=gene-CCO47_RS00005;Dbxref=GenBank:WP_000059090.1;Name=WP_000059090.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=CCO47_RS00005;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059090.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1406 2506 . + . ID=gene-CCO47_RS00010;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=CCO47_RS00010;old_locus_tag=CCO47_00010 NZ_CP075113.1 Protein Homology CDS 1406 2506 . + 0 ID=cds-WP_000673474.1;Parent=gene-CCO47_RS00010;Dbxref=GenBank:WP_000673474.1;Name=WP_000673474.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=CCO47_RS00010;product=DNA polymerase III subunit beta;protein_id=WP_000673474.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2654 3727 . + . ID=gene-CCO47_RS00015;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=CCO47_RS00015;old_locus_tag=CCO47_00015 NZ_CP075113.1 Protein Homology CDS 2654 3727 . + 0 ID=cds-WP_000060081.1;Parent=gene-CCO47_RS00015;Dbxref=GenBank:WP_000060081.1;Name=WP_000060081.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=CCO47_RS00015;product=DNA replication/repair protein RecF;protein_id=WP_000060081.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3756 6170 . + . ID=gene-CCO47_RS00020;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=CCO47_RS00020;old_locus_tag=CCO47_00020 NZ_CP075113.1 Protein Homology CDS 3756 6170 . + 0 ID=cds-WP_000072047.1;Parent=gene-CCO47_RS00020;Dbxref=GenBank:WP_000072047.1;Name=WP_000072047.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=CCO47_RS00020;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_000072047.1;transl_table=11 NZ_CP075113.1 RefSeq gene 6189 7085 . - . ID=gene-CCO47_RS00025;Name=CCO47_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00025;old_locus_tag=CCO47_00025 NZ_CP075113.1 Protein Homology CDS 6189 7085 . - 0 ID=cds-WP_001054589.1;Parent=gene-CCO47_RS00025;Dbxref=GenBank:WP_001054589.1;Name=WP_001054589.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462734.1;locus_tag=CCO47_RS00025;product=LysR family transcriptional regulator;protein_id=WP_001054589.1;transl_table=11 NZ_CP075113.1 RefSeq gene 7200 8390 . - . ID=gene-CCO47_RS00030;Name=CCO47_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00030;old_locus_tag=CCO47_00030 NZ_CP075113.1 Protein Homology CDS 7200 8390 . - 0 ID=cds-WP_000705609.1;Parent=gene-CCO47_RS00030;Dbxref=GenBank:WP_000705609.1;Name=WP_000705609.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764034.1;locus_tag=CCO47_RS00030;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_000705609.1;transl_table=11 NZ_CP075113.1 RefSeq gene 8407 9669 . - . ID=gene-CCO47_RS00035;Name=CCO47_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00035;old_locus_tag=CCO47_00035 NZ_CP075113.1 Protein Homology CDS 8407 9669 . - 0 ID=cds-WP_000061259.1;Parent=gene-CCO47_RS00035;Dbxref=GenBank:WP_000061259.1;Name=WP_000061259.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462732.1;locus_tag=CCO47_RS00035;product=MFS transporter;protein_id=WP_000061259.1;transl_table=11 NZ_CP075113.1 RefSeq gene 9974 10819 . + . ID=gene-CCO47_RS00040;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=CCO47_RS00040;old_locus_tag=CCO47_00040 NZ_CP075113.1 Protein Homology CDS 9974 10819 . + 0 ID=cds-WP_000985575.1;Parent=gene-CCO47_RS00040;Dbxref=GenBank:WP_000985575.1;Name=WP_000985575.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462731.1;locus_tag=CCO47_RS00040;product=sugar-phosphatase;protein_id=WP_000985575.1;transl_table=11 NZ_CP075113.1 RefSeq gene 11080 11769 . + . ID=gene-CCO47_RS00045;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=CCO47_RS00045;old_locus_tag=CCO47_00045 NZ_CP075113.1 Protein Homology CDS 11080 11769 . + 0 ID=cds-WP_000174317.1;Parent=gene-CCO47_RS00045;Dbxref=GenBank:WP_000174317.1;Name=WP_000174317.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462730.1;locus_tag=CCO47_RS00045;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WP_000174317.1;transl_table=11 NZ_CP075113.1 RefSeq gene 11766 12644 . + . ID=gene-CCO47_RS00050;Name=CCO47_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00050;old_locus_tag=CCO47_00050 NZ_CP075113.1 Protein Homology CDS 11766 12644 . + 0 ID=cds-WP_000127122.1;Parent=gene-CCO47_RS00050;Dbxref=GenBank:WP_000127122.1;Name=WP_000127122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462729.1;locus_tag=CCO47_RS00050;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_000127122.1;transl_table=11 NZ_CP075113.1 RefSeq gene 12628 13245 . + . ID=gene-CCO47_RS00055;Name=CCO47_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00055;old_locus_tag=CCO47_00055 NZ_CP075113.1 Protein Homology CDS 12628 13245 . + 0 ID=cds-WP_001198739.1;Parent=gene-CCO47_RS00055;Dbxref=GenBank:WP_001198739.1;Name=WP_001198739.1;Ontology_term=GO:0034194,GO:0008674;gbkey=CDS;go_function=2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity|0008674||IEA;go_process=D-galactonate catabolic process|0034194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229569.1;locus_tag=CCO47_RS00055;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_001198739.1;transl_table=11 NZ_CP075113.1 RefSeq gene 13242 14390 . + . ID=gene-CCO47_RS00060;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=CCO47_RS00060;old_locus_tag=CCO47_00060 NZ_CP075113.1 Protein Homology CDS 13242 14390 . + 0 ID=cds-WP_000704735.1;Parent=gene-CCO47_RS00060;Dbxref=GenBank:WP_000704735.1;Name=WP_000704735.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=CCO47_RS00060;product=galactonate dehydratase;protein_id=WP_000704735.1;transl_table=11 NZ_CP075113.1 RefSeq gene 14475 15812 . + . ID=gene-CCO47_RS00065;Name=CCO47_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00065;old_locus_tag=CCO47_00065 NZ_CP075113.1 Protein Homology CDS 14475 15812 . + 0 ID=cds-WP_000253524.1;Parent=gene-CCO47_RS00065;Dbxref=GenBank:WP_000253524.1;Name=WP_000253524.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462727.1;locus_tag=CCO47_RS00065;product=MFS transporter;protein_id=WP_000253524.1;transl_table=11 NZ_CP075113.1 RefSeq gene 15838 18573 . - . ID=gene-CCO47_RS00070;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=CCO47_RS00070;old_locus_tag=CCO47_00070 NZ_CP075113.1 Protein Homology CDS 15838 18573 . - 0 ID=cds-WP_000106959.1;Parent=gene-CCO47_RS00070;Dbxref=GenBank:WP_000106959.1;Name=WP_000106959.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=CCO47_RS00070;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_000106959.1;transl_table=11 NZ_CP075113.1 RefSeq gene 18653 19693 . + . ID=gene-CCO47_RS00075;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=CCO47_RS00075;old_locus_tag=CCO47_00075 NZ_CP075113.1 Protein Homology CDS 18653 19693 . + 0 ID=cds-WP_001202034.1;Parent=gene-CCO47_RS00075;Dbxref=GenBank:WP_001202034.1;Name=WP_001202034.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462725.1;locus_tag=CCO47_RS00075;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_001202034.1;transl_table=11 NZ_CP075113.1 RefSeq gene 19666 20358 . - . ID=gene-CCO47_RS00080;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=CCO47_RS00080;old_locus_tag=CCO47_00080 NZ_CP075113.1 Protein Homology CDS 19666 20358 . - 0 ID=cds-WP_001562512.1;Parent=gene-CCO47_RS00080;Dbxref=GenBank:WP_001562512.1;Name=WP_001562512.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=CCO47_RS00080;product=two-component system response regulator TorR;protein_id=WP_001562512.1;transl_table=11 NZ_CP075113.1 RefSeq gene 20488 21672 . + . ID=gene-CCO47_RS00085;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=CCO47_RS00085;old_locus_tag=CCO47_00085 NZ_CP075113.1 Protein Homology CDS 20488 21672 . + 0 ID=cds-WP_001230254.1;Parent=gene-CCO47_RS00085;Dbxref=GenBank:WP_001230254.1;Name=WP_001230254.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=CCO47_RS00085;product=pentaheme c-type cytochrome TorC;protein_id=WP_001230254.1;transl_table=11 NZ_CP075113.1 RefSeq gene 21662 24214 . + . ID=gene-CCO47_RS00090;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=CCO47_RS00090;old_locus_tag=CCO47_00090 NZ_CP075113.1 Protein Homology CDS 21662 24214 . + 0 ID=cds-WP_000790637.1;Parent=gene-CCO47_RS00090;Dbxref=GenBank:WP_000790637.1;Name=WP_000790637.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462722.1;locus_tag=CCO47_RS00090;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_000790637.1;transl_table=11 NZ_CP075113.1 RefSeq gene 24207 24839 . + . ID=gene-CCO47_RS00095;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=CCO47_RS00095;old_locus_tag=CCO47_00095 NZ_CP075113.1 Protein Homology CDS 24207 24839 . + 0 ID=cds-WP_000595416.1;Parent=gene-CCO47_RS00095;Dbxref=GenBank:WP_000595416.1;Name=WP_000595416.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462721.1;locus_tag=CCO47_RS00095;product=molecular chaperone TorD;protein_id=WP_000595416.1;transl_table=11 NZ_CP075113.1 RefSeq gene 25029 26429 . + . ID=gene-CCO47_RS00100;Name=CCO47_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00100;old_locus_tag=CCO47_00100 NZ_CP075113.1 Protein Homology CDS 25029 26429 . + 0 ID=cds-WP_000724474.1;Parent=gene-CCO47_RS00100;Dbxref=GenBank:WP_000724474.1;Name=WP_000724474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462720.1;locus_tag=CCO47_RS00100;product=cytochrome-c peroxidase;protein_id=WP_000724474.1;transl_table=11 NZ_CP075113.1 RefSeq gene 26435 27052 . + . ID=gene-CCO47_RS00105;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=CCO47_RS00105;old_locus_tag=CCO47_00105 NZ_CP075113.1 Protein Homology CDS 26435 27052 . + 0 ID=cds-WP_000888535.1;Parent=gene-CCO47_RS00105;Dbxref=GenBank:WP_000888535.1;Name=WP_000888535.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461197.1;locus_tag=CCO47_RS00105;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_000888535.1;transl_table=11 NZ_CP075113.1 RefSeq gene 27049 27708 . + . ID=gene-CCO47_RS00110;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=CCO47_RS00110;old_locus_tag=CCO47_00110 NZ_CP075113.1 Protein Homology CDS 27049 27708 . + 0 ID=cds-WP_000990039.1;Parent=gene-CCO47_RS00110;Dbxref=GenBank:WP_000990039.1;Name=WP_000990039.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=CCO47_RS00110;product=heme exporter protein CcmB;protein_id=WP_000990039.1;transl_table=11 NZ_CP075113.1 RefSeq gene 27760 28497 . + . ID=gene-CCO47_RS00115;Name=CCO47_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00115;old_locus_tag=CCO47_00115 NZ_CP075113.1 Protein Homology CDS 27760 28497 . + 0 ID=cds-WP_000266005.1;Parent=gene-CCO47_RS00115;Dbxref=GenBank:WP_000266005.1;Name=WP_000266005.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=CCO47_RS00115;product=heme ABC transporter permease;protein_id=WP_000266005.1;transl_table=11 NZ_CP075113.1 RefSeq gene 28494 28706 . + . ID=gene-CCO47_RS00120;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=CCO47_RS00120;old_locus_tag=CCO47_00120 NZ_CP075113.1 Protein Homology CDS 28494 28706 . + 0 ID=cds-WP_000074112.1;Parent=gene-CCO47_RS00120;Dbxref=GenBank:WP_000074112.1;Name=WP_000074112.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=CCO47_RS00120;product=heme exporter protein CcmD;protein_id=WP_000074112.1;transl_table=11 NZ_CP075113.1 RefSeq gene 28703 29203 . + . ID=gene-CCO47_RS00125;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=CCO47_RS00125;old_locus_tag=CCO47_00125 NZ_CP075113.1 Protein Homology CDS 28703 29203 . + 0 ID=cds-WP_001053620.1;Parent=gene-CCO47_RS00125;Dbxref=GenBank:WP_001053620.1;Name=WP_001053620.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=CCO47_RS00125;product=cytochrome c maturation protein CcmE;protein_id=WP_001053620.1;transl_table=11 NZ_CP075113.1 RefSeq gene 29200 31131 . + . ID=gene-CCO47_RS00130;Name=CCO47_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00130;old_locus_tag=CCO47_00130 NZ_CP075113.1 Protein Homology CDS 29200 31131 . + 0 ID=cds-WP_000982526.1;Parent=gene-CCO47_RS00130;Dbxref=GenBank:WP_000982526.1;Name=WP_000982526.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=CCO47_RS00130;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_000982526.1;transl_table=11 NZ_CP075113.1 RefSeq gene 31128 31685 . + . ID=gene-CCO47_RS00135;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=CCO47_RS00135;old_locus_tag=CCO47_00135 NZ_CP075113.1 Protein Homology CDS 31128 31685 . + 0 ID=cds-WP_000828305.1;Parent=gene-CCO47_RS00135;Dbxref=GenBank:WP_000828305.1;Name=WP_000828305.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=CCO47_RS00135;product=thiol:disulfide interchange protein DsbE;protein_id=WP_000828305.1;transl_table=11 NZ_CP075113.1 RefSeq gene 31682 32725 . + . ID=gene-CCO47_RS00140;Name=CCO47_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00140;old_locus_tag=CCO47_00140 NZ_CP075113.1 Protein Homology CDS 31682 32725 . + 0 ID=cds-WP_001238339.1;Parent=gene-CCO47_RS00140;Dbxref=GenBank:WP_001238339.1;Name=WP_001238339.1;Ontology_term=GO:0017004,GO:0015035,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=protein-disulfide reductase activity|0015035||IEA,metal ion binding|0046872||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=CCO47_RS00140;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_001238339.1;transl_table=11 NZ_CP075113.1 RefSeq gene 32847 34073 . + . ID=gene-CCO47_RS00145;Name=CCO47_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00145;old_locus_tag=CCO47_00145 NZ_CP075113.1 Protein Homology CDS 32847 34073 . + 0 ID=cds-WP_000809954.1;Parent=gene-CCO47_RS00145;Dbxref=GenBank:WP_000809954.1;Name=WP_000809954.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462711.1;locus_tag=CCO47_RS00145;product=YidR family protein;protein_id=WP_000809954.1;transl_table=11 NZ_CP075113.1 RefSeq gene 34075 34407 . - . ID=gene-CCO47_RS00150;Name=CCO47_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00150;old_locus_tag=CCO47_00150 NZ_CP075113.1 Protein Homology CDS 34075 34407 . - 0 ID=cds-WP_001675643.1;Parent=gene-CCO47_RS00150;Dbxref=GenBank:WP_001675643.1;Name=WP_001675643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675643.1;locus_tag=CCO47_RS00150;product=YceK/YidQ family lipoprotein;protein_id=WP_001675643.1;transl_table=11 NZ_CP075113.1 cmsearch sequence_feature 34650 34723 . + . ID=id-NZ_CP075113.1:34650..34723;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_CP075113.1 RefSeq gene 34717 35130 . + . ID=gene-CCO47_RS00155;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=CCO47_RS00155;old_locus_tag=CCO47_00155 NZ_CP075113.1 Protein Homology CDS 34717 35130 . + 0 ID=cds-WP_001532742.1;Parent=gene-CCO47_RS00155;Dbxref=GenBank:WP_001532742.1;Name=WP_001532742.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=CCO47_RS00155;product=small heat shock chaperone IbpA;protein_id=WP_001532742.1;transl_table=11 NZ_CP075113.1 RefSeq gene 35240 35668 . + . ID=gene-CCO47_RS00160;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=CCO47_RS00160;old_locus_tag=CCO47_00160 NZ_CP075113.1 Protein Homology CDS 35240 35668 . + 0 ID=cds-WP_001246919.1;Parent=gene-CCO47_RS00160;Dbxref=GenBank:WP_001246919.1;Name=WP_001246919.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=CCO47_RS00160;product=small heat shock chaperone IbpB;protein_id=WP_001246919.1;transl_table=11 NZ_CP075113.1 RefSeq gene 35857 37518 . + . ID=gene-CCO47_RS00165;Name=CCO47_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00165;old_locus_tag=CCO47_00165 NZ_CP075113.1 Protein Homology CDS 35857 37518 . + 0 ID=cds-WP_001279788.1;Parent=gene-CCO47_RS00165;Dbxref=GenBank:WP_001279788.1;Name=WP_001279788.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462707.1;locus_tag=CCO47_RS00165;product=putative transporter;protein_id=WP_001279788.1;transl_table=11 NZ_CP075113.1 RefSeq gene 37962 38309 . + . ID=gene-CCO47_RS00170;Name=CCO47_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00170;old_locus_tag=CCO47_00170 NZ_CP075113.1 Protein Homology CDS 37962 38309 . + 0 ID=cds-WP_000703964.1;Parent=gene-CCO47_RS00170;Dbxref=GenBank:WP_000703964.1;Name=WP_000703964.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=CCO47_RS00170;product=YidH family protein;protein_id=WP_000703964.1;transl_table=11 NZ_CP075113.1 RefSeq gene 38299 38661 . + . ID=gene-CCO47_RS00175;Name=CCO47_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00175;old_locus_tag=CCO47_00175 NZ_CP075113.1 Protein Homology CDS 38299 38661 . + 0 ID=cds-WP_001113454.1;Parent=gene-CCO47_RS00175;Dbxref=GenBank:WP_001113454.1;Name=WP_001113454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462705.1;locus_tag=CCO47_RS00175;product=DUF202 domain-containing protein;protein_id=WP_001113454.1;transl_table=11 NZ_CP075113.1 RefSeq gene 38658 39188 . + . ID=gene-CCO47_RS00180;Name=CCO47_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00180;old_locus_tag=CCO47_00180 NZ_CP075113.1 Protein Homology CDS 38658 39188 . + 0 ID=cds-WP_000147830.1;Parent=gene-CCO47_RS00180;Dbxref=GenBank:WP_000147830.1;Name=WP_000147830.1;Ontology_term=GO:0003824,GO:0051539,GO:1904047;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462704.1;locus_tag=CCO47_RS00180;product=radical SAM protein;protein_id=WP_000147830.1;transl_table=11 NZ_CP075113.1 RefSeq gene 39270 40592 . - . ID=gene-CCO47_RS00185;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=CCO47_RS00185;old_locus_tag=CCO47_00185 NZ_CP075113.1 Protein Homology CDS 39270 40592 . - 0 ID=cds-WP_000427995.1;Parent=gene-CCO47_RS00185;Dbxref=GenBank:WP_000427995.1;Name=WP_000427995.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=CCO47_RS00185;product=D-serine ammonia-lyase;protein_id=WP_000427995.1;transl_table=11 NZ_CP075113.1 RefSeq gene 40610 41947 . - . ID=gene-CCO47_RS00190;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=CCO47_RS00190;old_locus_tag=CCO47_00190 NZ_CP075113.1 Protein Homology CDS 40610 41947 . - 0 ID=cds-WP_000543317.1;Parent=gene-CCO47_RS00190;Dbxref=GenBank:WP_000543317.1;Name=WP_000543317.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=CCO47_RS00190;product=D-serine transporter DsdX;protein_id=WP_000543317.1;transl_table=11 NZ_CP075113.1 RefSeq gene 42173 43096 . + . ID=gene-CCO47_RS00195;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=CCO47_RS00195;old_locus_tag=CCO47_00195 NZ_CP075113.1 Protein Homology CDS 42173 43096 . + 0 ID=cds-WP_001541637.1;Parent=gene-CCO47_RS00195;Dbxref=GenBank:WP_001541637.1;Name=WP_001541637.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462701.1;locus_tag=CCO47_RS00195;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_001541637.1;transl_table=11 NZ_CP075113.1 RefSeq gene 43160 44245 . + . ID=gene-CCO47_RS00200;Name=CCO47_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00200;old_locus_tag=CCO47_00200 NZ_CP075113.1 Protein Homology CDS 43160 44245 . + 0 ID=cds-WP_000238929.1;Parent=gene-CCO47_RS00200;Dbxref=GenBank:WP_000238929.1;Name=WP_000238929.1;Ontology_term=GO:0000272,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=CCO47_RS00200;product=cellulase family glycosylhydrolase;protein_id=WP_000238929.1;transl_table=11 NZ_CP075113.1 RefSeq gene 44172 45356 . - . ID=gene-CCO47_RS00205;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=CCO47_RS00205;old_locus_tag=CCO47_00205 NZ_CP075113.1 Protein Homology CDS 44172 45356 . - 0 ID=cds-WP_000828751.1;Parent=gene-CCO47_RS00205;Dbxref=GenBank:WP_000828751.1;Name=WP_000828751.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462699.1;locus_tag=CCO47_RS00205;product=multidrug efflux MFS transporter EmrD;protein_id=WP_000828751.1;transl_table=11 NZ_CP075113.1 RefSeq gene 45559 46419 . - . ID=gene-CCO47_RS00210;Name=CCO47_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00210;old_locus_tag=CCO47_00210 NZ_CP075113.1 Protein Homology CDS 45559 46419 . - 0 ID=cds-WP_072103989.1;Parent=gene-CCO47_RS00210;Dbxref=GenBank:WP_072103989.1;Name=WP_072103989.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=CCO47_RS00210;product=DMT family transporter;protein_id=WP_072103989.1;transl_table=11 NZ_CP075113.1 RefSeq gene 46512 46601 . - . ID=gene-CCO47_RS00215;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=CCO47_RS00215;old_locus_tag=CCO47_00215 NZ_CP075113.1 Protein Homology CDS 46512 46601 . - 0 ID=cds-WP_000117642.1;Parent=gene-CCO47_RS00215;Dbxref=GenBank:WP_000117642.1;Name=WP_000117642.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=CCO47_RS00215;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_000117642.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 46598 46712 . - . ID=gene-CCO47_RS00220;Name=CCO47_RS00220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS00220;old_locus_tag=CCO47_00220;pseudo=true NZ_CP075113.1 Protein Homology CDS 46598 46712 . - 0 ID=cds-CCO47_RS00220;Parent=gene-CCO47_RS00220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=CCO47_RS00220;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 47235 47333 . + . ID=gene-CCO47_RS00225;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=CCO47_RS00225;old_locus_tag=CCO47_00225 NZ_CP075113.1 Protein Homology CDS 47235 47333 . + 0 ID=cds-WP_001541152.1;Parent=gene-CCO47_RS00225;Dbxref=GenBank:WP_001541152.1;Name=WP_001541152.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462696.1;locus_tag=CCO47_RS00225;product=ilvB operon leader peptide IvbL;protein_id=WP_001541152.1;transl_table=11 NZ_CP075113.1 RefSeq gene 47440 49128 . + . ID=gene-CCO47_RS00230;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=CCO47_RS00230;old_locus_tag=CCO47_00230 NZ_CP075113.1 Protein Homology CDS 47440 49128 . + 0 ID=cds-WP_000168439.1;Parent=gene-CCO47_RS00230;Dbxref=GenBank:WP_000168439.1;Name=WP_000168439.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=CCO47_RS00230;product=acetolactate synthase large subunit;protein_id=WP_000168439.1;transl_table=11 NZ_CP075113.1 RefSeq gene 49132 49422 . + . ID=gene-CCO47_RS00235;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=CCO47_RS00235;old_locus_tag=CCO47_00235 NZ_CP075113.1 Protein Homology CDS 49132 49422 . + 0 ID=cds-WP_001171826.1;Parent=gene-CCO47_RS00235;Dbxref=GenBank:WP_001171826.1;Name=WP_001171826.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462694.1;locus_tag=CCO47_RS00235;product=acetolactate synthase small subunit;protein_id=WP_001171826.1;transl_table=11 NZ_CP075113.1 RefSeq gene 49424 50209 . - . ID=gene-CCO47_RS00240;Name=CCO47_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00240;old_locus_tag=CCO47_00240 NZ_CP075113.1 Protein Homology CDS 49424 50209 . - 0 ID=cds-WP_000448638.1;Parent=gene-CCO47_RS00240;Dbxref=GenBank:WP_000448638.1;Name=WP_000448638.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462693.1;locus_tag=CCO47_RS00240;product=DeoR family transcriptional regulator;protein_id=WP_000448638.1;transl_table=11 NZ_CP075113.1 RefSeq gene 50534 51454 . + . ID=gene-CCO47_RS00245;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=CCO47_RS00245;old_locus_tag=CCO47_00245 NZ_CP075113.1 Protein Homology CDS 50534 51454 . + 0 ID=cds-WP_000350272.1;Parent=gene-CCO47_RS00245;Dbxref=GenBank:WP_000350272.1;Name=WP_000350272.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462692.1;locus_tag=CCO47_RS00245;product=ribokinase;protein_id=WP_000350272.1;transl_table=11 NZ_CP075113.1 RefSeq gene 51485 52801 . + . ID=gene-CCO47_RS00250;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=CCO47_RS00250;old_locus_tag=CCO47_00250 NZ_CP075113.1 Protein Homology CDS 51485 52801 . + 0 ID=cds-WP_000998359.1;Parent=gene-CCO47_RS00250;Dbxref=GenBank:WP_000998359.1;Name=WP_000998359.1;Ontology_term=GO:0015756,GO:0015150,GO:0015535;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA,fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462691.1;locus_tag=CCO47_RS00250;product=L-fucose:H+ symporter permease;protein_id=WP_000998359.1;transl_table=11 NZ_CP075113.1 RefSeq gene 52813 53826 . + . ID=gene-CCO47_RS00255;Name=CCO47_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00255;old_locus_tag=CCO47_00255 NZ_CP075113.1 Protein Homology CDS 52813 53826 . + 0 ID=cds-WP_000213193.1;Parent=gene-CCO47_RS00255;Dbxref=GenBank:WP_000213193.1;Name=WP_000213193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462690.1;locus_tag=CCO47_RS00255;product=aldose 1-epimerase family protein;protein_id=WP_000213193.1;transl_table=11 NZ_CP075113.1 RefSeq gene 53901 54491 . + . ID=gene-CCO47_RS00260;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=CCO47_RS00260;old_locus_tag=CCO47_00260 NZ_CP075113.1 Protein Homology CDS 53901 54491 . + 0 ID=cds-WP_000633672.1;Parent=gene-CCO47_RS00260;Dbxref=GenBank:WP_000633672.1;Name=WP_000633672.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462689.1;locus_tag=CCO47_RS00260;product=response regulator transcription factor UhpA;protein_id=WP_000633672.1;transl_table=11 NZ_CP075113.1 RefSeq gene 54491 55993 . + . ID=gene-CCO47_RS00265;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=CCO47_RS00265;old_locus_tag=CCO47_00265 NZ_CP075113.1 Protein Homology CDS 54491 55993 . + 0 ID=cds-WP_001091269.1;Parent=gene-CCO47_RS00265;Dbxref=GenBank:WP_001091269.1;Name=WP_001091269.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462688.1;locus_tag=CCO47_RS00265;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_001091269.1;transl_table=11 NZ_CP075113.1 RefSeq gene 56003 57331 . + . ID=gene-CCO47_RS00270;Name=uhpC;gbkey=Gene;gene=uhpC;gene_biotype=protein_coding;locus_tag=CCO47_RS00270;old_locus_tag=CCO47_00270 NZ_CP075113.1 Protein Homology CDS 56003 57331 . + 0 ID=cds-WP_000948174.1;Parent=gene-CCO47_RS00270;Dbxref=GenBank:WP_000948174.1;Name=WP_000948174.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462687.1;locus_tag=CCO47_RS00270;product=MFS transporter;protein_id=WP_000948174.1;transl_table=11 NZ_CP075113.1 RefSeq gene 57474 58865 . + . ID=gene-CCO47_RS00275;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=CCO47_RS00275;old_locus_tag=CCO47_00275 NZ_CP075113.1 Protein Homology CDS 57474 58865 . + 0 ID=cds-WP_000879181.1;Parent=gene-CCO47_RS00275;Dbxref=GenBank:WP_000879181.1;Name=WP_000879181.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=CCO47_RS00275;product=hexose-6-phosphate:phosphate antiporter UhpT;protein_id=WP_000879181.1;transl_table=11 NZ_CP075113.1 RefSeq gene 59058 59510 . + . ID=gene-CCO47_RS00280;Name=CCO47_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00280;old_locus_tag=CCO47_00280 NZ_CP075113.1 Protein Homology CDS 59058 59510 . + 0 ID=cds-WP_001519640.1;Parent=gene-CCO47_RS00280;Dbxref=GenBank:WP_001519640.1;Name=WP_001519640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=CCO47_RS00280;product=DUF1198 domain-containing protein;protein_id=WP_001519640.1;transl_table=11 NZ_CP075113.1 RefSeq gene 59943 60266 . - . ID=gene-CCO47_RS00285;Name=CCO47_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00285;old_locus_tag=CCO47_00285 NZ_CP075113.1 Protein Homology CDS 59943 60266 . - 0 ID=cds-WP_001274841.1;Parent=gene-CCO47_RS00285;Dbxref=GenBank:WP_001274841.1;Name=WP_001274841.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462677.1;locus_tag=CCO47_RS00285;product=helix-turn-helix domain-containing protein;protein_id=WP_001274841.1;transl_table=11 NZ_CP075113.1 RefSeq gene 60250 60609 . - . ID=gene-CCO47_RS00290;Name=CCO47_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00290;old_locus_tag=CCO47_00290 NZ_CP075113.1 Protein Homology CDS 60250 60609 . - 0 ID=cds-WP_001258723.1;Parent=gene-CCO47_RS00290;Dbxref=GenBank:WP_001258723.1;Name=WP_001258723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=CCO47_RS00290;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001258723.1;transl_table=11 NZ_CP075113.1 RefSeq gene 60825 62018 . + . ID=gene-CCO47_RS00295;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=CCO47_RS00295;old_locus_tag=CCO47_00295 NZ_CP075113.1 Protein Homology CDS 60825 62018 . + 0 ID=cds-WP_001004789.1;Parent=gene-CCO47_RS00295;Dbxref=GenBank:WP_001004789.1;Name=WP_001004789.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462675.1;locus_tag=CCO47_RS00295;product=purine ribonucleoside efflux pump NepI;protein_id=WP_001004789.1;transl_table=11 NZ_CP075113.1 RefSeq gene 62078 63460 . - . ID=gene-CCO47_RS00300;Name=CCO47_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00300;old_locus_tag=CCO47_00300 NZ_CP075113.1 Protein Homology CDS 62078 63460 . - 0 ID=cds-WP_001270467.1;Parent=gene-CCO47_RS00300;Dbxref=GenBank:WP_001270467.1;Name=WP_001270467.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462674.1;locus_tag=CCO47_RS00300;product=glycoside hydrolase family 1 protein;protein_id=WP_001270467.1;transl_table=11 NZ_CP075113.1 RefSeq gene 63566 63859 . - . ID=gene-CCO47_RS00305;Name=CCO47_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00305;old_locus_tag=CCO47_00305 NZ_CP075113.1 Protein Homology CDS 63566 63859 . - 0 ID=cds-WP_000824212.1;Parent=gene-CCO47_RS00305;Dbxref=GenBank:WP_000824212.1;Name=WP_000824212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462673.1;locus_tag=CCO47_RS00305;product=YicS family protein;protein_id=WP_000824212.1;transl_table=11 NZ_CP075113.1 RefSeq gene 64056 64214 . + . ID=gene-CCO47_RS24035;Name=CCO47_RS24035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24035 NZ_CP075113.1 Protein Homology CDS 64056 64214 . + 0 ID=cds-WP_001675645.1;Parent=gene-CCO47_RS24035;Dbxref=GenBank:WP_001675645.1;Name=WP_001675645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675645.1;locus_tag=CCO47_RS24035;product=hypothetical protein;protein_id=WP_001675645.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 64338 66711 . + . ID=gene-CCO47_RS00315;Name=CCO47_RS00315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS00315;old_locus_tag=CCO47_00315;pseudo=true NZ_CP075113.1 Protein Homology CDS 64338 66711 . + 0 ID=cds-CCO47_RS00315;Parent=gene-CCO47_RS00315;Note=frameshifted;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=CCO47_RS00315;product=sigma 54-interacting transcriptional regulator;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 66930 67355 . + . ID=gene-CCO47_RS00320;Name=CCO47_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00320;old_locus_tag=CCO47_00320 NZ_CP075113.1 Protein Homology CDS 66930 67355 . + 0 ID=cds-WP_000214106.1;Parent=gene-CCO47_RS00320;Dbxref=GenBank:WP_000214106.1;Name=WP_000214106.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0034219,GO:0008982,GO:0016301,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462671.1;locus_tag=CCO47_RS00320;product=PTS sugar transporter subunit IIA;protein_id=WP_000214106.1;transl_table=11 NZ_CP075113.1 RefSeq gene 67366 67851 . + . ID=gene-CCO47_RS00325;Name=CCO47_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00325;old_locus_tag=CCO47_00325 NZ_CP075113.1 Protein Homology CDS 67366 67851 . + 0 ID=cds-WP_001284295.1;Parent=gene-CCO47_RS00325;Dbxref=GenBank:WP_001284295.1;Name=WP_001284295.1;Ontology_term=GO:0008643,GO:0009401,GO:0034219,GO:0008982,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462670.1;locus_tag=CCO47_RS00325;product=PTS sugar transporter subunit IIB;protein_id=WP_001284295.1;transl_table=11 NZ_CP075113.1 RefSeq gene 67997 68746 . + . ID=gene-CCO47_RS00330;Name=CCO47_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00330;old_locus_tag=CCO47_00330 NZ_CP075113.1 Protein Homology CDS 67997 68746 . + 0 ID=cds-WP_000380259.1;Parent=gene-CCO47_RS00330;Dbxref=GenBank:WP_000380259.1;Name=WP_000380259.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462669.1;locus_tag=CCO47_RS00330;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000380259.1;transl_table=11 NZ_CP075113.1 RefSeq gene 68743 69603 . + . ID=gene-CCO47_RS00335;Name=CCO47_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00335;old_locus_tag=CCO47_00335 NZ_CP075113.1 Protein Homology CDS 68743 69603 . + 0 ID=cds-WP_001575156.1;Parent=gene-CCO47_RS00335;Dbxref=GenBank:WP_001575156.1;Name=WP_001575156.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=CCO47_RS00335;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_001575156.1;transl_table=11 NZ_CP075113.1 RefSeq gene 69607 70716 . + . ID=gene-CCO47_RS00340;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=CCO47_RS00340;old_locus_tag=CCO47_00340 NZ_CP075113.1 Protein Homology CDS 69607 70716 . + 0 ID=cds-WP_000188476.1;Parent=gene-CCO47_RS00340;Dbxref=GenBank:WP_000188476.1;Name=WP_000188476.1;Ontology_term=GO:0016829;gbkey=CDS;gene=dgaE;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462667.1;locus_tag=CCO47_RS00340;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=WP_000188476.1;transl_table=11 NZ_CP075113.1 RefSeq gene 70703 71446 . + . ID=gene-CCO47_RS00345;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=CCO47_RS00345;old_locus_tag=CCO47_00345 NZ_CP075113.1 Protein Homology CDS 70703 71446 . + 0 ID=cds-WP_001186140.1;Parent=gene-CCO47_RS00345;Dbxref=GenBank:WP_001186140.1;Name=WP_001186140.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=CCO47_RS00345;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_001186140.1;transl_table=11 NZ_CP075113.1 RefSeq gene 71682 72623 . + . ID=gene-CCO47_RS00350;Name=CCO47_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00350;old_locus_tag=CCO47_00350 NZ_CP075113.1 Protein Homology CDS 71682 72623 . + 0 ID=cds-WP_000749540.1;Parent=gene-CCO47_RS00350;Dbxref=GenBank:WP_000749540.1;Name=WP_000749540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462665.1;locus_tag=CCO47_RS00350;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000749540.1;transl_table=11 NZ_CP075113.1 RefSeq gene 72666 73568 . - . ID=gene-CCO47_RS00355;Name=CCO47_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00355;old_locus_tag=CCO47_00355 NZ_CP075113.1 Protein Homology CDS 72666 73568 . - 0 ID=cds-WP_000535970.1;Parent=gene-CCO47_RS00355;Dbxref=GenBank:WP_000535970.1;Name=WP_000535970.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462664.1;locus_tag=CCO47_RS00355;product=EamA family transporter;protein_id=WP_000535970.1;transl_table=11 NZ_CP075113.1 RefSeq gene 74077 74772 . + . ID=gene-CCO47_RS00360;Name=CCO47_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00360;old_locus_tag=CCO47_00360 NZ_CP075113.1 Protein Homology CDS 74077 74772 . + 0 ID=cds-WP_000392700.1;Parent=gene-CCO47_RS00360;Dbxref=GenBank:WP_000392700.1;Name=WP_000392700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462663.1;locus_tag=CCO47_RS00360;product=MgtC family protein;protein_id=WP_000392700.1;transl_table=11 NZ_CP075113.1 RefSeq gene 74992 77718 . + . ID=gene-CCO47_RS00365;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=CCO47_RS00365;old_locus_tag=CCO47_00365 NZ_CP075113.1 Protein Homology CDS 74992 77718 . + 0 ID=cds-WP_000131291.1;Parent=gene-CCO47_RS00365;Dbxref=GenBank:WP_000131291.1;Name=WP_000131291.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=CCO47_RS00365;product=magnesium-translocating P-type ATPase;protein_id=WP_000131291.1;transl_table=11 NZ_CP075113.1 RefSeq gene 77740 77832 . + . ID=gene-CCO47_RS00370;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=CCO47_RS00370;old_locus_tag=CCO47_00370 NZ_CP075113.1 Protein Homology CDS 77740 77832 . + 0 ID=cds-WP_001082117.1;Parent=gene-CCO47_RS00370;Dbxref=GenBank:WP_001082117.1;Name=WP_001082117.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082117.1;locus_tag=CCO47_RS00370;product=protein MgtR;protein_id=WP_001082117.1;transl_table=11 NZ_CP075113.1 RefSeq gene 77845 77931 . + . ID=gene-CCO47_RS24040;Name=mgtU;gbkey=Gene;gene=mgtU;gene_biotype=protein_coding;locus_tag=CCO47_RS24040 NZ_CP075113.1 Protein Homology CDS 77845 77931 . + 0 ID=cds-WP_252515021.1;Parent=gene-CCO47_RS24040;Dbxref=GenBank:WP_252515021.1;Name=WP_252515021.1;gbkey=CDS;gene=mgtU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_251009859.1;locus_tag=CCO47_RS24040;product=magnesium transporter protection protein MgtU;protein_id=WP_252515021.1;transl_table=11 NZ_CP075113.1 RefSeq gene 78033 78512 . + . ID=gene-CCO47_RS00375;Name=cigR;gbkey=Gene;gene=cigR;gene_biotype=protein_coding;locus_tag=CCO47_RS00375;old_locus_tag=CCO47_00375 NZ_CP075113.1 Protein Homology CDS 78033 78512 . + 0 ID=cds-WP_001065327.1;Parent=gene-CCO47_RS00375;Dbxref=GenBank:WP_001065327.1;Name=WP_001065327.1;gbkey=CDS;gene=cigR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462661.1;locus_tag=CCO47_RS00375;product=anti-virulence regulatory inner membrane protein CigR;protein_id=WP_001065327.1;transl_table=11 NZ_CP075113.1 RefSeq gene 78680 79360 . - . ID=gene-CCO47_RS00380;Name=CCO47_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00380;old_locus_tag=CCO47_00380 NZ_CP075113.1 Protein Homology CDS 78680 79360 . - 0 ID=cds-WP_000106466.1;Parent=gene-CCO47_RS00380;Dbxref=GenBank:WP_000106466.1;Name=WP_000106466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462660.1;locus_tag=CCO47_RS00380;product=isochorismatase family protein;protein_id=WP_000106466.1;transl_table=11 NZ_CP075113.1 RefSeq gene 80144 81001 . + . ID=gene-CCO47_RS00390;Name=CCO47_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00390;old_locus_tag=CCO47_00390 NZ_CP075113.1 Protein Homology CDS 80144 81001 . + 0 ID=cds-WP_077908464.1;Parent=gene-CCO47_RS00390;Dbxref=GenBank:WP_077908464.1;Name=WP_077908464.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=CCO47_RS00390;product=winged helix-turn-helix domain-containing protein;protein_id=WP_077908464.1;transl_table=11 NZ_CP075113.1 RefSeq gene 80994 81476 . + . ID=gene-CCO47_RS00395;Name=CCO47_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00395;old_locus_tag=CCO47_00395 NZ_CP075113.1 Protein Homology CDS 80994 81476 . + 0 ID=cds-WP_000516576.1;Parent=gene-CCO47_RS00395;Dbxref=GenBank:WP_000516576.1;Name=WP_000516576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000516874.1;locus_tag=CCO47_RS00395;product=YqeJ family protein;protein_id=WP_000516576.1;transl_table=11 NZ_CP075113.1 RefSeq gene 81571 84438 . - . ID=gene-CCO47_RS00400;Name=misL;gbkey=Gene;gene=misL;gene_biotype=protein_coding;locus_tag=CCO47_RS00400;old_locus_tag=CCO47_00400 NZ_CP075113.1 Protein Homology CDS 81571 84438 . - 0 ID=cds-WP_001143034.1;Parent=gene-CCO47_RS00400;Dbxref=GenBank:WP_001143034.1;Name=WP_001143034.1;gbkey=CDS;gene=misL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=CCO47_RS00400;product=intestinal colonization autotransporter adhesin MisL;protein_id=WP_001143034.1;transl_table=11 NZ_CP075113.1 RefSeq gene 84513 85130 . - . ID=gene-CCO47_RS00405;Name=CCO47_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00405;old_locus_tag=CCO47_00405 NZ_CP075113.1 Protein Homology CDS 84513 85130 . - 0 ID=cds-WP_000984813.1;Parent=gene-CCO47_RS00405;Dbxref=GenBank:WP_000984813.1;Name=WP_000984813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462655.1;locus_tag=CCO47_RS00405;product=helix-turn-helix transcriptional regulator;protein_id=WP_000984813.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 86144 86275 . + . ID=gene-CCO47_RS00410;Name=CCO47_RS00410;end_range=86275,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS00410;old_locus_tag=CCO47_00410;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 86144 86275 . + 0 ID=cds-CCO47_RS00410;Parent=gene-CCO47_RS00410;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=86275,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611920.1;locus_tag=CCO47_RS00410;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 86429 87466 . - . ID=gene-CCO47_RS00415;Name=rhuM;gbkey=Gene;gene=rhuM;gene_biotype=protein_coding;locus_tag=CCO47_RS00415;old_locus_tag=CCO47_00415 NZ_CP075113.1 Protein Homology CDS 86429 87466 . - 0 ID=cds-WP_000774140.1;Parent=gene-CCO47_RS00415;Dbxref=GenBank:WP_000774140.1;Name=WP_000774140.1;gbkey=CDS;gene=rhuM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462654.1;locus_tag=CCO47_RS00415;product=virulence protein RhuM;protein_id=WP_000774140.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 87554 87970 . - . ID=gene-CCO47_RS00420;Name=CCO47_RS00420;end_range=87970,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS00420;old_locus_tag=CCO47_00420;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 87554 87970 . - 0 ID=cds-CCO47_RS00420;Parent=gene-CCO47_RS00420;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=87970,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227719.1;locus_tag=CCO47_RS00420;partial=true;product=DUF4942 domain-containing protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 88000 89185 . - . ID=gene-CCO47_RS00425;Name=CCO47_RS00425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS00425;old_locus_tag=CCO47_00425;pseudo=true NZ_CP075113.1 Protein Homology CDS 88000 89185 . - 0 ID=cds-CCO47_RS00425;Parent=gene-CCO47_RS00425;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462652.1;locus_tag=CCO47_RS00425;product=AAA family ATPase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 89290 89445 . - . ID=gene-CCO47_RS00430;Name=CCO47_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00430;old_locus_tag=CCO47_00430 NZ_CP075113.1 Protein Homology CDS 89290 89445 . - 0 ID=cds-WP_077904897.1;Parent=gene-CCO47_RS00430;Dbxref=GenBank:WP_077904897.1;Name=WP_077904897.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018465.7;locus_tag=CCO47_RS00430;product=TA system toxin CbtA family protein;protein_id=WP_077904897.1;transl_table=11 NZ_CP075113.1 RefSeq gene 89863 90207 . + . ID=gene-CCO47_RS00435;Name=CCO47_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00435;old_locus_tag=CCO47_00435 NZ_CP075113.1 Protein Homology CDS 89863 90207 . + 0 ID=cds-WP_000120776.1;Parent=gene-CCO47_RS00435;Dbxref=GenBank:WP_000120776.1;Name=WP_000120776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462651.1;locus_tag=CCO47_RS00435;product=hypothetical protein;protein_id=WP_000120776.1;transl_table=11 NZ_CP075113.1 RefSeq gene 90524 90618 . - . ID=gene-CCO47_RS00440;Name=CCO47_RS00440;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS00440;old_locus_tag=CCO47_00440 NZ_CP075113.1 tRNAscan-SE tRNA 90524 90618 . - . ID=rna-CCO47_RS00440;Parent=gene-CCO47_RS00440;anticodon=(pos:complement(90582..90584));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS00440;product=tRNA-Sec NZ_CP075113.1 tRNAscan-SE exon 90524 90618 . - . ID=exon-CCO47_RS00440-1;Parent=rna-CCO47_RS00440;anticodon=(pos:complement(90582..90584));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS00440;product=tRNA-Sec NZ_CP075113.1 RefSeq pseudogene 91002 92287 . + . ID=gene-CCO47_RS00445;Name=CCO47_RS00445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS00445;old_locus_tag=CCO47_00445;pseudo=true NZ_CP075113.1 Protein Homology CDS 91002 92287 . + 0 ID=cds-CCO47_RS00445;Parent=gene-CCO47_RS00445;Note=frameshifted;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: protein motif:HMM:NF024742.7;locus_tag=CCO47_RS00445;product=glycoside-pentoside-hexuronide family transporter;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 92299 94617 . + . ID=gene-CCO47_RS00450;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=CCO47_RS00450;old_locus_tag=CCO47_00450 NZ_CP075113.1 Protein Homology CDS 92299 94617 . + 0 ID=cds-WP_000702990.1;Parent=gene-CCO47_RS00450;Dbxref=GenBank:WP_000702990.1;Name=WP_000702990.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462649.1;locus_tag=CCO47_RS00450;product=alpha-xylosidase;protein_id=WP_000702990.1;transl_table=11 NZ_CP075113.1 RefSeq gene 94720 96429 . - . ID=gene-CCO47_RS00455;Name=CCO47_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00455;old_locus_tag=CCO47_00455 NZ_CP075113.1 Protein Homology CDS 94720 96429 . - 0 ID=cds-WP_000766659.1;Parent=gene-CCO47_RS00455;Dbxref=GenBank:WP_000766659.1;Name=WP_000766659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=CCO47_RS00455;product=AsmA family protein;protein_id=WP_000766659.1;transl_table=11 NZ_CP075113.1 RefSeq gene 96550 97941 . - . ID=gene-CCO47_RS00460;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=CCO47_RS00460;old_locus_tag=CCO47_00460 NZ_CP075113.1 Protein Homology CDS 96550 97941 . - 0 ID=cds-WP_000115428.1;Parent=gene-CCO47_RS00460;Dbxref=GenBank:WP_000115428.1;Name=WP_000115428.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=CCO47_RS00460;product=xanthine/proton symporter XanP;protein_id=WP_000115428.1;transl_table=11 NZ_CP075113.1 RefSeq gene 98169 99374 . + . ID=gene-CCO47_RS00465;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=CCO47_RS00465;old_locus_tag=CCO47_00465 NZ_CP075113.1 Protein Homology CDS 98169 99374 . + 0 ID=cds-WP_000462250.1;Parent=gene-CCO47_RS00465;Dbxref=GenBank:WP_000462250.1;Name=WP_000462250.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507315.1;locus_tag=CCO47_RS00465;product=sodium/glutamate symporter;protein_id=WP_000462250.1;transl_table=11 NZ_CP075113.1 RefSeq gene 99410 101491 . - . ID=gene-CCO47_RS00470;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=CCO47_RS00470;old_locus_tag=CCO47_00470 NZ_CP075113.1 Protein Homology CDS 99410 101491 . - 0 ID=cds-WP_000016748.1;Parent=gene-CCO47_RS00470;Dbxref=GenBank:WP_000016748.1;Name=WP_000016748.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=CCO47_RS00470;product=ATP-dependent DNA helicase RecG;protein_id=WP_000016748.1;transl_table=11 NZ_CP075113.1 RefSeq gene 101497 102186 . - . ID=gene-CCO47_RS00475;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=CCO47_RS00475;old_locus_tag=CCO47_00475 NZ_CP075113.1 Protein Homology CDS 101497 102186 . - 0 ID=cds-WP_001068433.1;Parent=gene-CCO47_RS00475;Dbxref=GenBank:WP_001068433.1;Name=WP_001068433.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=CCO47_RS00475;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_001068433.1;transl_table=11 NZ_CP075113.1 RefSeq gene 102191 104302 . - . ID=gene-CCO47_RS00480;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=CCO47_RS00480;old_locus_tag=CCO47_00480 NZ_CP075113.1 Protein Homology CDS 102191 104302 . - 0 ID=cds-WP_000280481.1;Parent=gene-CCO47_RS00480;Dbxref=GenBank:WP_000280481.1;Name=WP_000280481.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=CCO47_RS00480;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280481.1;transl_table=11 NZ_CP075113.1 RefSeq gene 104321 104596 . - . ID=gene-CCO47_RS00485;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=CCO47_RS00485;old_locus_tag=CCO47_00485 NZ_CP075113.1 Protein Homology CDS 104321 104596 . - 0 ID=cds-WP_000135058.1;Parent=gene-CCO47_RS00485;Dbxref=GenBank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=CCO47_RS00485;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11 NZ_CP075113.1 RefSeq gene 104651 105274 . - . ID=gene-CCO47_RS00490;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=CCO47_RS00490;old_locus_tag=CCO47_00490 NZ_CP075113.1 Protein Homology CDS 104651 105274 . - 0 ID=cds-WP_000046966.1;Parent=gene-CCO47_RS00490;Dbxref=GenBank:WP_000046966.1;Name=WP_000046966.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=CCO47_RS00490;product=guanylate kinase;protein_id=WP_000046966.1;transl_table=11 NZ_CP075113.1 RefSeq gene 105531 107216 . + . ID=gene-CCO47_RS00495;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=CCO47_RS00495;old_locus_tag=CCO47_00495 NZ_CP075113.1 Protein Homology CDS 105531 107216 . + 0 ID=cds-WP_001241843.1;Parent=gene-CCO47_RS00495;Dbxref=GenBank:WP_001241843.1;Name=WP_001241843.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=CCO47_RS00495;product=NAD-dependent DNA ligase LigB;protein_id=WP_001241843.1;transl_table=11 NZ_CP075113.1 RefSeq gene 107213 107830 . - . ID=gene-CCO47_RS00500;Name=CCO47_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00500;old_locus_tag=CCO47_00500 NZ_CP075113.1 Protein Homology CDS 107213 107830 . - 0 ID=cds-WP_000924334.1;Parent=gene-CCO47_RS00500;Dbxref=GenBank:WP_000924334.1;Name=WP_000924334.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=CCO47_RS00500;product=trimeric intracellular cation channel family protein;protein_id=WP_000924334.1;transl_table=11 NZ_CP075113.1 RefSeq gene 108081 108962 . - . ID=gene-CCO47_RS00505;Name=CCO47_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00505;old_locus_tag=CCO47_00505 NZ_CP075113.1 Protein Homology CDS 108081 108962 . - 0 ID=cds-WP_001082964.1;Parent=gene-CCO47_RS00505;Dbxref=GenBank:WP_001082964.1;Name=WP_001082964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462637.1;locus_tag=CCO47_RS00505;product=HARLDQ motif MBL-fold protein;protein_id=WP_001082964.1;transl_table=11 NZ_CP075113.1 RefSeq gene 109036 109938 . + . ID=gene-CCO47_RS00510;Name=CCO47_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00510;old_locus_tag=CCO47_00510 NZ_CP075113.1 Protein Homology CDS 109036 109938 . + 0 ID=cds-WP_001050864.1;Parent=gene-CCO47_RS00510;Dbxref=GenBank:WP_001050864.1;Name=WP_001050864.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=CCO47_RS00510;product=LysR family transcriptional regulator;protein_id=WP_001050864.1;transl_table=11 NZ_CP075113.1 RefSeq gene 109988 110851 . - . ID=gene-CCO47_RS00515;Name=CCO47_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00515;old_locus_tag=CCO47_00515 NZ_CP075113.1 Protein Homology CDS 109988 110851 . - 0 ID=cds-WP_000621351.1;Parent=gene-CCO47_RS00515;Dbxref=GenBank:WP_000621351.1;Name=WP_000621351.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=CCO47_RS00515;product=YicC/YloC family endoribonuclease;protein_id=WP_000621351.1;transl_table=11 NZ_CP075113.1 RefSeq gene 110977 111693 . + . ID=gene-CCO47_RS00520;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=CCO47_RS00520;old_locus_tag=CCO47_00520 NZ_CP075113.1 Protein Homology CDS 110977 111693 . + 0 ID=cds-WP_001247078.1;Parent=gene-CCO47_RS00520;Dbxref=GenBank:WP_001247078.1;Name=WP_001247078.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=CCO47_RS00520;product=ribonuclease PH;protein_id=WP_001247078.1;transl_table=11 NZ_CP075113.1 RefSeq gene 111772 112413 . + . ID=gene-CCO47_RS00525;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=CCO47_RS00525;old_locus_tag=CCO47_00525 NZ_CP075113.1 Protein Homology CDS 111772 112413 . + 0 ID=cds-WP_000806167.1;Parent=gene-CCO47_RS00525;Dbxref=GenBank:WP_000806167.1;Name=WP_000806167.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=CCO47_RS00525;product=orotate phosphoribosyltransferase;protein_id=WP_000806167.1;transl_table=11 NZ_CP075113.1 RefSeq gene 112491 113087 . - . ID=gene-CCO47_RS00530;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=CCO47_RS00530;old_locus_tag=CCO47_00530 NZ_CP075113.1 Protein Homology CDS 112491 113087 . - 0 ID=cds-WP_000818606.1;Parent=gene-CCO47_RS00530;Dbxref=GenBank:WP_000818606.1;Name=WP_000818606.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=CCO47_RS00530;product=nucleoid occlusion factor SlmA;protein_id=WP_000818606.1;transl_table=11 NZ_CP075113.1 RefSeq gene 113195 113653 . - . ID=gene-CCO47_RS00535;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=CCO47_RS00535;old_locus_tag=CCO47_00535 NZ_CP075113.1 Protein Homology CDS 113195 113653 . - 0 ID=cds-WP_000976078.1;Parent=gene-CCO47_RS00535;Dbxref=GenBank:WP_000976078.1;Name=WP_000976078.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=CCO47_RS00535;product=dUTP diphosphatase;protein_id=WP_000976078.1;transl_table=11 NZ_CP075113.1 RefSeq gene 113631 114851 . - . ID=gene-CCO47_RS00540;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=CCO47_RS00540;old_locus_tag=CCO47_00540 NZ_CP075113.1 Protein Homology CDS 113631 114851 . - 0 ID=cds-WP_000050177.1;Parent=gene-CCO47_RS00540;Dbxref=GenBank:WP_000050177.1;Name=WP_000050177.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=CCO47_RS00540;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_000050177.1;transl_table=11 NZ_CP075113.1 RefSeq gene 115027 115692 . + . ID=gene-CCO47_RS00545;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=CCO47_RS00545;old_locus_tag=CCO47_00545 NZ_CP075113.1 Protein Homology CDS 115027 115692 . + 0 ID=cds-WP_000380129.1;Parent=gene-CCO47_RS00545;Dbxref=GenBank:WP_000380129.1;Name=WP_000380129.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462629.1;locus_tag=CCO47_RS00545;product=RadC family protein;protein_id=WP_000380129.1;transl_table=11 NZ_CP075113.1 RefSeq gene 115910 116146 . + . ID=gene-CCO47_RS00550;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=CCO47_RS00550;old_locus_tag=CCO47_00550 NZ_CP075113.1 Protein Homology CDS 115910 116146 . + 0 ID=cds-WP_001519051.1;Parent=gene-CCO47_RS00550;Dbxref=GenBank:WP_001519051.1;Name=WP_001519051.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=CCO47_RS00550;product=50S ribosomal protein L28;protein_id=WP_001519051.1;transl_table=11 NZ_CP075113.1 RefSeq gene 116167 116334 . + . ID=gene-CCO47_RS00555;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CCO47_RS00555;old_locus_tag=CCO47_00555 NZ_CP075113.1 Protein Homology CDS 116167 116334 . + 0 ID=cds-WP_001051798.1;Parent=gene-CCO47_RS00555;Dbxref=GenBank:WP_001051798.1;Name=WP_001051798.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=CCO47_RS00555;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11 NZ_CP075113.1 RefSeq gene 116432 117241 . + . ID=gene-CCO47_RS00560;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=CCO47_RS00560;old_locus_tag=CCO47_00560 NZ_CP075113.1 Protein Homology CDS 116432 117241 . + 0 ID=cds-WP_001114515.1;Parent=gene-CCO47_RS00560;Dbxref=GenBank:WP_001114515.1;Name=WP_001114515.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462626.1;locus_tag=CCO47_RS00560;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_001114515.1;transl_table=11 NZ_CP075113.1 RefSeq gene 117269 117748 . - . ID=gene-CCO47_RS00565;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=CCO47_RS00565;old_locus_tag=CCO47_00565 NZ_CP075113.1 Protein Homology CDS 117269 117748 . - 0 ID=cds-WP_001171884.1;Parent=gene-CCO47_RS00565;Dbxref=GenBank:WP_001171884.1;Name=WP_001171884.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462625.1;locus_tag=CCO47_RS00565;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171884.1;transl_table=11 NZ_CP075113.1 RefSeq gene 117757 119034 . - . ID=gene-CCO47_RS00570;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=CCO47_RS00570;old_locus_tag=CCO47_00570 NZ_CP075113.1 Protein Homology CDS 117757 119034 . - 0 ID=cds-WP_000891582.1;Parent=gene-CCO47_RS00570;Dbxref=GenBank:WP_000891582.1;Name=WP_000891582.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462624.1;locus_tag=CCO47_RS00570;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_000891582.1;transl_table=11 NZ_CP075113.1 RefSeq gene 119443 120513 . + . ID=gene-CCO47_RS00575;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=CCO47_RS00575;old_locus_tag=CCO47_00575 NZ_CP075113.1 Protein Homology CDS 119443 120513 . + 0 ID=cds-WP_001522125.1;Parent=gene-CCO47_RS00575;Dbxref=GenBank:WP_001522125.1;Name=WP_001522125.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=CCO47_RS00575;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_001522125.1;transl_table=11 NZ_CP075113.1 RefSeq gene 120510 121634 . + . ID=gene-CCO47_RS00580;Name=CCO47_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00580;old_locus_tag=CCO47_00580 NZ_CP075113.1 Protein Homology CDS 120510 121634 . + 0 ID=cds-WP_001261577.1;Parent=gene-CCO47_RS00580;Dbxref=GenBank:WP_001261577.1;Name=WP_001261577.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462622.1;locus_tag=CCO47_RS00580;product=glycosyltransferase family 4 protein;protein_id=WP_001261577.1;transl_table=11 NZ_CP075113.1 RefSeq gene 121627 122424 . + . ID=gene-CCO47_RS00585;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=CCO47_RS00585;old_locus_tag=CCO47_00585 NZ_CP075113.1 Protein Homology CDS 121627 122424 . + 0 ID=cds-WP_000229830.1;Parent=gene-CCO47_RS00585;Dbxref=GenBank:WP_000229830.1;Name=WP_000229830.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462621.1;locus_tag=CCO47_RS00585;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_000229830.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 122480 122641 . + . ID=gene-CCO47_RS00590;Name=CCO47_RS00590;end_range=122641,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS00590;old_locus_tag=CCO47_00590;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 122480 122641 . + 0 ID=cds-CCO47_RS00590;Parent=gene-CCO47_RS00590;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=122641,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280096.1;locus_tag=CCO47_RS00590;partial=true;product=glycosyltransferase family 8 protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 122759 123838 . + . ID=gene-CCO47_RS00595;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=rfaB;locus_tag=CCO47_RS00595;old_locus_tag=CCO47_00595 NZ_CP075113.1 Protein Homology CDS 122759 123838 . + 0 ID=cds-WP_000683975.1;Parent=gene-CCO47_RS00595;Dbxref=GenBank:WP_000683975.1;Name=WP_000683975.1;gbkey=CDS;gene=waaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462619.1;locus_tag=CCO47_RS00595;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=WP_000683975.1;transl_table=11 NZ_CP075113.1 RefSeq gene 123844 124857 . + . ID=gene-CCO47_RS00600;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=CCO47_RS00600;old_locus_tag=CCO47_00600 NZ_CP075113.1 Protein Homology CDS 123844 124857 . + 0 ID=cds-WP_000088475.1;Parent=gene-CCO47_RS00600;Dbxref=GenBank:WP_000088475.1;Name=WP_000088475.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462618.1;locus_tag=CCO47_RS00600;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_000088475.1;transl_table=11 NZ_CP075113.1 RefSeq gene 124875 125888 . + . ID=gene-CCO47_RS00605;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=CCO47_RS00605;old_locus_tag=CCO47_00605 NZ_CP075113.1 Protein Homology CDS 124875 125888 . + 0 ID=cds-WP_000376877.1;Parent=gene-CCO47_RS00605;Dbxref=GenBank:WP_000376877.1;Name=WP_000376877.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=CCO47_RS00605;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;protein_id=WP_000376877.1;transl_table=11 NZ_CP075113.1 RefSeq gene 125911 126609 . + . ID=gene-CCO47_RS00610;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=CCO47_RS00610;old_locus_tag=CCO47_00610 NZ_CP075113.1 Protein Homology CDS 125911 126609 . + 0 ID=cds-WP_000582810.1;Parent=gene-CCO47_RS00610;Dbxref=GenBank:WP_000582810.1;Name=WP_000582810.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462616.1;locus_tag=CCO47_RS00610;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_000582810.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 126759 127567 . + . ID=gene-CCO47_RS00615;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=pseudogene;locus_tag=CCO47_RS00615;old_locus_tag=CCO47_00615;pseudo=true NZ_CP075113.1 Protein Homology CDS 126759 127567 . + 0 ID=cds-CCO47_RS00615;Parent=gene-CCO47_RS00615;Note=frameshifted;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462615.1;locus_tag=CCO47_RS00615;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 127667 128812 . + . ID=gene-CCO47_RS00620;Name=CCO47_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00620;old_locus_tag=CCO47_00620 NZ_CP075113.1 Protein Homology CDS 127667 128812 . + 0 ID=cds-WP_000591821.1;Parent=gene-CCO47_RS00620;Dbxref=GenBank:WP_000591821.1;Name=WP_000591821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462614.1;locus_tag=CCO47_RS00620;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WP_000591821.1;transl_table=11 NZ_CP075113.1 RefSeq gene 128870 130084 . - . ID=gene-CCO47_RS00625;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=CCO47_RS00625;old_locus_tag=CCO47_00625 NZ_CP075113.1 Protein Homology CDS 128870 130084 . - 0 ID=cds-WP_000958457.1;Parent=gene-CCO47_RS00625;Dbxref=GenBank:WP_000958457.1;Name=WP_000958457.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462613.1;locus_tag=CCO47_RS00625;product=O-antigen ligase RfaL;protein_id=WP_000958457.1;transl_table=11 NZ_CP075113.1 RefSeq gene 130124 131077 . - . ID=gene-CCO47_RS00630;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=CCO47_RS00630;old_locus_tag=CCO47_00630 NZ_CP075113.1 Protein Homology CDS 130124 131077 . - 0 ID=cds-WP_001264616.1;Parent=gene-CCO47_RS00630;Dbxref=GenBank:WP_001264616.1;Name=WP_001264616.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462612.1;locus_tag=CCO47_RS00630;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_001264616.1;transl_table=11 NZ_CP075113.1 RefSeq gene 131077 132123 . - . ID=gene-CCO47_RS00635;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=CCO47_RS00635;old_locus_tag=CCO47_00635 NZ_CP075113.1 Protein Homology CDS 131077 132123 . - 0 ID=cds-WP_000699201.1;Parent=gene-CCO47_RS00635;Dbxref=GenBank:WP_000699201.1;Name=WP_000699201.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462611.1;locus_tag=CCO47_RS00635;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_000699201.1;transl_table=11 NZ_CP075113.1 RefSeq gene 132126 133058 . - . ID=gene-CCO47_RS00640;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=CCO47_RS00640;old_locus_tag=CCO47_00640 NZ_CP075113.1 Protein Homology CDS 132126 133058 . - 0 ID=cds-WP_000587775.1;Parent=gene-CCO47_RS00640;Dbxref=GenBank:WP_000587775.1;Name=WP_000587775.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=CCO47_RS00640;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_000587775.1;transl_table=11 NZ_CP075113.1 RefSeq gene 133261 134457 . + . ID=gene-CCO47_RS00645;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=CCO47_RS00645;old_locus_tag=CCO47_00645 NZ_CP075113.1 Protein Homology CDS 133261 134457 . + 0 ID=cds-WP_001213790.1;Parent=gene-CCO47_RS00645;Dbxref=GenBank:WP_001213790.1;Name=WP_001213790.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=CCO47_RS00645;product=glycine C-acetyltransferase;protein_id=WP_001213790.1;transl_table=11 NZ_CP075113.1 RefSeq gene 134467 135492 . + . ID=gene-CCO47_RS00650;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=CCO47_RS00650;old_locus_tag=CCO47_00650 NZ_CP075113.1 Protein Homology CDS 134467 135492 . + 0 ID=cds-WP_000645990.1;Parent=gene-CCO47_RS00650;Dbxref=GenBank:WP_000645990.1;Name=WP_000645990.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=CCO47_RS00650;product=L-threonine 3-dehydrogenase;protein_id=WP_000645990.1;transl_table=11 NZ_CP075113.1 RefSeq gene 135786 136820 . + . ID=gene-CCO47_RS00655;Name=CCO47_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00655;old_locus_tag=CCO47_00655 NZ_CP075113.1 Protein Homology CDS 135786 136820 . + 0 ID=cds-WP_000798209.1;Parent=gene-CCO47_RS00655;Dbxref=GenBank:WP_000798209.1;Name=WP_000798209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462607.1;locus_tag=CCO47_RS00655;product=glycosyltransferase;protein_id=WP_000798209.1;transl_table=11 NZ_CP075113.1 RefSeq gene 136807 137769 . - . ID=gene-CCO47_RS00660;Name=CCO47_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00660;old_locus_tag=CCO47_00660 NZ_CP075113.1 Protein Homology CDS 136807 137769 . - 0 ID=cds-WP_001135519.1;Parent=gene-CCO47_RS00660;Dbxref=GenBank:WP_001135519.1;Name=WP_001135519.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462606.1;locus_tag=CCO47_RS00660;product=divergent polysaccharide deacetylase family protein;protein_id=WP_001135519.1;transl_table=11 NZ_CP075113.1 RefSeq gene 137773 139032 . - . ID=gene-CCO47_RS00665;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=CCO47_RS00665;old_locus_tag=CCO47_00665 NZ_CP075113.1 Protein Homology CDS 137773 139032 . - 0 ID=cds-WP_228770042.1;Parent=gene-CCO47_RS00665;Dbxref=GenBank:WP_228770042.1;Name=WP_228770042.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=CCO47_RS00665;product=murein hydrolase activator EnvC;protein_id=WP_228770042.1;transl_table=11 NZ_CP075113.1 RefSeq gene 139066 140610 . - . ID=gene-CCO47_RS00670;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=CCO47_RS00670;old_locus_tag=CCO47_00670 NZ_CP075113.1 Protein Homology CDS 139066 140610 . - 0 ID=cds-WP_000116582.1;Parent=gene-CCO47_RS00670;Dbxref=GenBank:WP_000116582.1;Name=WP_000116582.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=CCO47_RS00670;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_000116582.1;transl_table=11 NZ_CP075113.1 RefSeq gene 140858 141289 . + . ID=gene-CCO47_RS00675;Name=CCO47_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00675;old_locus_tag=CCO47_00675 NZ_CP075113.1 Protein Homology CDS 140858 141289 . + 0 ID=cds-WP_001156179.1;Parent=gene-CCO47_RS00675;Dbxref=GenBank:WP_001156179.1;Name=WP_001156179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462603.1;locus_tag=CCO47_RS00675;product=rhodanese-like domain-containing protein;protein_id=WP_001156179.1;transl_table=11 NZ_CP075113.1 RefSeq gene 141376 141627 . + . ID=gene-CCO47_RS00680;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=CCO47_RS00680;old_locus_tag=CCO47_00680 NZ_CP075113.1 Protein Homology CDS 141376 141627 . + 0 ID=cds-WP_001273795.1;Parent=gene-CCO47_RS00680;Dbxref=GenBank:WP_001273795.1;Name=WP_001273795.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462602.1;locus_tag=CCO47_RS00680;product=glutaredoxin 3;protein_id=WP_001273795.1;transl_table=11 NZ_CP075113.1 RefSeq gene 141671 142138 . + . ID=gene-CCO47_RS00685;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=CCO47_RS00685;old_locus_tag=CCO47_00685 NZ_CP075113.1 Protein Homology CDS 141671 142138 . + 0 ID=cds-WP_000003370.1;Parent=gene-CCO47_RS00685;Dbxref=GenBank:WP_000003370.1;Name=WP_000003370.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=CCO47_RS00685;product=protein-export chaperone SecB;protein_id=WP_000003370.1;transl_table=11 NZ_CP075113.1 RefSeq gene 142138 143157 . + . ID=gene-CCO47_RS00690;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=CCO47_RS00690;old_locus_tag=CCO47_00690 NZ_CP075113.1 Protein Homology CDS 142138 143157 . + 0 ID=cds-WP_001076596.1;Parent=gene-CCO47_RS00690;Dbxref=GenBank:WP_001076596.1;Name=WP_001076596.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462600.1;locus_tag=CCO47_RS00690;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076596.1;transl_table=11 NZ_CP075113.1 RefSeq gene 143235 144056 . + . ID=gene-CCO47_RS00695;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=CCO47_RS00695;old_locus_tag=CCO47_00695 NZ_CP075113.1 Protein Homology CDS 143235 144056 . + 0 ID=cds-WP_001112114.1;Parent=gene-CCO47_RS00695;Dbxref=GenBank:WP_001112114.1;Name=WP_001112114.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=L-cysteine biosynthetic process from L-serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=CCO47_RS00695;product=serine O-acetyltransferase;protein_id=WP_001112114.1;transl_table=11 NZ_CP075113.1 RefSeq gene 144139 145449 . - . ID=gene-CCO47_RS00700;Name=CCO47_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00700;old_locus_tag=CCO47_00700 NZ_CP075113.1 Protein Homology CDS 144139 145449 . - 0 ID=cds-WP_001092098.1;Parent=gene-CCO47_RS00700;Dbxref=GenBank:WP_001092098.1;Name=WP_001092098.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462598.1;locus_tag=CCO47_RS00700;product=MFS transporter;protein_id=WP_001092098.1;transl_table=11 NZ_CP075113.1 RefSeq gene 145523 146719 . - . ID=gene-CCO47_RS00705;Name=CCO47_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00705;old_locus_tag=CCO47_00705 NZ_CP075113.1 Protein Homology CDS 145523 146719 . - 0 ID=cds-WP_001218249.1;Parent=gene-CCO47_RS00705;Dbxref=GenBank:WP_001218249.1;Name=WP_001218249.1;Ontology_term=GO:0046392,GO:1903663,GO:0008867,GO:1990594;gbkey=CDS;go_function=galactarate dehydratase activity|0008867||IEA,L-altrarate dehydratase activity|1990594||IEA;go_process=galactarate catabolic process|0046392||IEA,L-altrarate catabolic process|1903663||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462597.1;locus_tag=CCO47_RS00705;product=L-talarate/galactarate dehydratase;protein_id=WP_001218249.1;transl_table=11 NZ_CP075113.1 RefSeq gene 147038 148042 . + . ID=gene-CCO47_RS00710;Name=CCO47_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00710;old_locus_tag=CCO47_00710 NZ_CP075113.1 Protein Homology CDS 147038 148042 . + 0 ID=cds-WP_001537635.1;Parent=gene-CCO47_RS00710;Dbxref=GenBank:WP_001537635.1;Name=WP_001537635.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462596.1;locus_tag=CCO47_RS00710;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_001537635.1;transl_table=11 NZ_CP075113.1 RefSeq gene 148110 148583 . - . ID=gene-CCO47_RS00715;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=CCO47_RS00715;old_locus_tag=CCO47_00715 NZ_CP075113.1 Protein Homology CDS 148110 148583 . - 0 ID=cds-WP_000932336.1;Parent=gene-CCO47_RS00715;Dbxref=GenBank:WP_000932336.1;Name=WP_000932336.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=CCO47_RS00715;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932336.1;transl_table=11 NZ_CP075113.1 RefSeq gene 148647 149837 . - . ID=gene-CCO47_RS00720;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=CCO47_RS00720;old_locus_tag=CCO47_00720 NZ_CP075113.1 Protein Homology CDS 148647 149837 . - 0 ID=cds-WP_000586988.1;Parent=gene-CCO47_RS00720;Dbxref=GenBank:WP_000586988.1;Name=WP_000586988.1;gbkey=CDS;gene=lldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=CCO47_RS00720;product=quinone-dependent L-lactate dehydrogenase;protein_id=WP_000586988.1;transl_table=11 NZ_CP075113.1 RefSeq gene 149834 150610 . - . ID=gene-CCO47_RS00725;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=CCO47_RS00725;old_locus_tag=CCO47_00725 NZ_CP075113.1 Protein Homology CDS 149834 150610 . - 0 ID=cds-WP_000636696.1;Parent=gene-CCO47_RS00725;Dbxref=GenBank:WP_000636696.1;Name=WP_000636696.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462593.1;locus_tag=CCO47_RS00725;product=transcriptional regulator LldR;protein_id=WP_000636696.1;transl_table=11 NZ_CP075113.1 RefSeq gene 150607 152262 . - . ID=gene-CCO47_RS00730;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=CCO47_RS00730;old_locus_tag=CCO47_00730 NZ_CP075113.1 Protein Homology CDS 150607 152262 . - 0 ID=cds-WP_001055305.1;Parent=gene-CCO47_RS00730;Dbxref=GenBank:WP_001055305.1;Name=WP_001055305.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=CCO47_RS00730;product=L-lactate permease;protein_id=WP_001055305.1;transl_table=11 NZ_CP075113.1 RefSeq gene 152561 156589 . - . ID=gene-CCO47_RS00735;Name=sadA;gbkey=Gene;gene=sadA;gene_biotype=protein_coding;locus_tag=CCO47_RS00735;old_locus_tag=CCO47_00735 NZ_CP075113.1 Protein Homology CDS 152561 156589 . - 0 ID=cds-WP_001079585.1;Parent=gene-CCO47_RS00735;Dbxref=GenBank:WP_001079585.1;Name=WP_001079585.1;gbkey=CDS;gene=sadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462591.1;locus_tag=CCO47_RS00735;product=trimeric autotransporter adhesin SadA;protein_id=WP_001079585.1;transl_table=11 NZ_CP075113.1 RefSeq gene 156633 157316 . - . ID=gene-CCO47_RS00740;Name=CCO47_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00740;old_locus_tag=CCO47_00740 NZ_CP075113.1 Protein Homology CDS 156633 157316 . - 0 ID=cds-WP_000549460.1;Parent=gene-CCO47_RS00740;Dbxref=GenBank:WP_000549460.1;Name=WP_000549460.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462590.1;locus_tag=CCO47_RS00740;product=SadB/YajI family lipoprotein;protein_id=WP_000549460.1;transl_table=11 NZ_CP075113.1 RefSeq gene 157804 158166 . - . ID=gene-CCO47_RS00745;Name=CCO47_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00745;old_locus_tag=CCO47_00745 NZ_CP075113.1 Protein Homology CDS 157804 158166 . - 0 ID=cds-WP_000665687.1;Parent=gene-CCO47_RS00745;Dbxref=GenBank:WP_000665687.1;Name=WP_000665687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462589.1;locus_tag=CCO47_RS00745;product=YibL family ribosome-associated protein;protein_id=WP_000665687.1;transl_table=11 NZ_CP075113.1 RefSeq gene 158457 158666 . + . ID=gene-CCO47_RS00750;Name=CCO47_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00750;old_locus_tag=CCO47_00750 NZ_CP075113.1 Protein Homology CDS 158457 158666 . + 0 ID=cds-WP_001062558.1;Parent=gene-CCO47_RS00750;Dbxref=GenBank:WP_001062558.1;Name=WP_001062558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462588.1;locus_tag=CCO47_RS00750;product=hypothetical protein;protein_id=WP_001062558.1;transl_table=11 NZ_CP075113.1 RefSeq gene 158676 159266 . - . ID=gene-CCO47_RS00755;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=CCO47_RS00755;old_locus_tag=CCO47_00755 NZ_CP075113.1 Protein Homology CDS 158676 159266 . - 0 ID=cds-WP_000193201.1;Parent=gene-CCO47_RS00755;Dbxref=GenBank:WP_000193201.1;Name=WP_000193201.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462587.1;locus_tag=CCO47_RS00755;product=mannitol operon repressor MtlR;protein_id=WP_000193201.1;transl_table=11 NZ_CP075113.1 RefSeq gene 159263 160411 . - . ID=gene-CCO47_RS00760;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=CCO47_RS00760;old_locus_tag=CCO47_00760 NZ_CP075113.1 Protein Homology CDS 159263 160411 . - 0 ID=cds-WP_000645383.1;Parent=gene-CCO47_RS00760;Dbxref=GenBank:WP_000645383.1;Name=WP_000645383.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=CCO47_RS00760;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_000645383.1;transl_table=11 NZ_CP075113.1 RefSeq gene 160642 162558 . - . ID=gene-CCO47_RS00765;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=CCO47_RS00765;old_locus_tag=CCO47_00765 NZ_CP075113.1 Protein Homology CDS 160642 162558 . - 0 ID=cds-WP_000093287.1;Parent=gene-CCO47_RS00765;Dbxref=GenBank:WP_000093287.1;Name=WP_000093287.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462585.1;locus_tag=CCO47_RS00765;product=PTS mannitol transporter subunit IICBA;protein_id=WP_000093287.1;transl_table=11 NZ_CP075113.1 RefSeq gene 163034 163642 . + . ID=gene-CCO47_RS00770;Name=CCO47_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00770;old_locus_tag=CCO47_00770 NZ_CP075113.1 Protein Homology CDS 163034 163642 . + 0 ID=cds-WP_000766688.1;Parent=gene-CCO47_RS00770;Dbxref=GenBank:WP_000766688.1;Name=WP_000766688.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462584.1;locus_tag=CCO47_RS00770;product=glutathione S-transferase;protein_id=WP_000766688.1;transl_table=11 NZ_CP075113.1 RefSeq gene 163741 165132 . + . ID=gene-CCO47_RS00775;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=CCO47_RS00775;old_locus_tag=CCO47_00775 NZ_CP075113.1 Protein Homology CDS 163741 165132 . + 0 ID=cds-WP_000200194.1;Parent=gene-CCO47_RS00775;Dbxref=GenBank:WP_000200194.1;Name=WP_000200194.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462583.1;locus_tag=CCO47_RS00775;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_000200194.1;transl_table=11 NZ_CP075113.1 RefSeq gene 165129 166979 . + . ID=gene-CCO47_RS00780;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=CCO47_RS00780;old_locus_tag=CCO47_00780 NZ_CP075113.1 Protein Homology CDS 165129 166979 . + 0 ID=cds-WP_000582391.1;Parent=gene-CCO47_RS00780;Dbxref=GenBank:WP_000582391.1;Name=WP_000582391.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=CCO47_RS00780;product=selenocysteine-specific translation elongation factor;protein_id=WP_000582391.1;transl_table=11 NZ_CP075113.1 RefSeq gene 167264 168145 . - . ID=gene-CCO47_RS00785;Name=CCO47_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00785;old_locus_tag=CCO47_00785 NZ_CP075113.1 Protein Homology CDS 167264 168145 . - 0 ID=cds-WP_001188275.1;Parent=gene-CCO47_RS00785;Dbxref=GenBank:WP_001188275.1;Name=WP_001188275.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954677.1;locus_tag=CCO47_RS00785;product=ROK family protein;protein_id=WP_001188275.1;transl_table=11 NZ_CP075113.1 RefSeq gene 168314 169852 . + . ID=gene-CCO47_RS00790;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=CCO47_RS00790;old_locus_tag=CCO47_00790 NZ_CP075113.1 Protein Homology CDS 168314 169852 . + 0 ID=cds-WP_000183988.1;Parent=gene-CCO47_RS00790;Dbxref=GenBank:WP_000183988.1;Name=WP_000183988.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462580.1;locus_tag=CCO47_RS00790;product=aldehyde dehydrogenase AldB;protein_id=WP_000183988.1;transl_table=11 NZ_CP075113.1 RefSeq gene 169970 171925 . - . ID=gene-CCO47_RS00795;Name=CCO47_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00795;old_locus_tag=CCO47_00795 NZ_CP075113.1 Protein Homology CDS 169970 171925 . - 0 ID=cds-WP_001101501.1;Parent=gene-CCO47_RS00795;Dbxref=GenBank:WP_001101501.1;Name=WP_001101501.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=CCO47_RS00795;product=glycoside hydrolase family 127 protein;protein_id=WP_001101501.1;transl_table=11 NZ_CP075113.1 RefSeq gene 172189 173004 . + . ID=gene-CCO47_RS00800;Name=CCO47_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00800;old_locus_tag=CCO47_00800 NZ_CP075113.1 Protein Homology CDS 172189 173004 . + 0 ID=cds-WP_000891818.1;Parent=gene-CCO47_RS00800;Dbxref=GenBank:WP_000891818.1;Name=WP_000891818.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=CCO47_RS00800;product=AraC family transcriptional regulator;protein_id=WP_000891818.1;transl_table=11 NZ_CP075113.1 RefSeq gene 173165 173860 . - . ID=gene-CCO47_RS00805;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=CCO47_RS00805;old_locus_tag=CCO47_00805 NZ_CP075113.1 Protein Homology CDS 173165 173860 . - 0 ID=cds-WP_000893174.1;Parent=gene-CCO47_RS00805;Dbxref=GenBank:WP_000893174.1;Name=WP_000893174.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462577.1;locus_tag=CCO47_RS00805;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000893174.1;transl_table=11 NZ_CP075113.1 RefSeq gene 173854 174714 . - . ID=gene-CCO47_RS00810;Name=CCO47_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00810;old_locus_tag=CCO47_00810 NZ_CP075113.1 Protein Homology CDS 173854 174714 . - 0 ID=cds-WP_001244035.1;Parent=gene-CCO47_RS00810;Dbxref=GenBank:WP_001244035.1;Name=WP_001244035.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=CCO47_RS00810;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_001244035.1;transl_table=11 NZ_CP075113.1 RefSeq gene 174707 175369 . - . ID=gene-CCO47_RS00815;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=CCO47_RS00815;old_locus_tag=CCO47_00815 NZ_CP075113.1 Protein Homology CDS 174707 175369 . - 0 ID=cds-WP_000089527.1;Parent=gene-CCO47_RS00815;Dbxref=GenBank:WP_000089527.1;Name=WP_000089527.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462575.1;locus_tag=CCO47_RS00815;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000089527.1;transl_table=11 NZ_CP075113.1 RefSeq gene 175366 176862 . - . ID=gene-CCO47_RS00820;Name=CCO47_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00820;old_locus_tag=CCO47_00820 NZ_CP075113.1 Protein Homology CDS 175366 176862 . - 0 ID=cds-WP_000074096.1;Parent=gene-CCO47_RS00820;Dbxref=GenBank:WP_000074096.1;Name=WP_000074096.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462574.1;locus_tag=CCO47_RS00820;product=FGGY-family carbohydrate kinase;protein_id=WP_000074096.1;transl_table=11 NZ_CP075113.1 RefSeq gene 176866 177852 . - . ID=gene-CCO47_RS00825;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;locus_tag=CCO47_RS00825;old_locus_tag=CCO47_00825 NZ_CP075113.1 Protein Homology CDS 176866 177852 . - 0 ID=cds-WP_000766337.1;Parent=gene-CCO47_RS00825;Dbxref=GenBank:WP_000766337.1;Name=WP_000766337.1;gbkey=CDS;gene=yiaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=CCO47_RS00825;product=2%2C3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO;protein_id=WP_000766337.1;transl_table=11 NZ_CP075113.1 RefSeq gene 177864 179141 . - . ID=gene-CCO47_RS00830;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=CCO47_RS00830;old_locus_tag=CCO47_00830 NZ_CP075113.1 Protein Homology CDS 177864 179141 . - 0 ID=cds-WP_000301822.1;Parent=gene-CCO47_RS00830;Dbxref=GenBank:WP_000301822.1;Name=WP_000301822.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaN;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462572.1;locus_tag=CCO47_RS00830;product=2%2C3-diketo-L-gulonate TRAP transporter large permease YiaN;protein_id=WP_000301822.1;transl_table=11 NZ_CP075113.1 RefSeq gene 179144 179617 . - . ID=gene-CCO47_RS00835;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=CCO47_RS00835;old_locus_tag=CCO47_00835 NZ_CP075113.1 Protein Homology CDS 179144 179617 . - 0 ID=cds-WP_000832316.1;Parent=gene-CCO47_RS00835;Dbxref=GenBank:WP_000832316.1;Name=WP_000832316.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaM;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462571.1;locus_tag=CCO47_RS00835;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WP_000832316.1;transl_table=11 NZ_CP075113.1 RefSeq gene 179756 180688 . - . ID=gene-CCO47_RS00840;Name=CCO47_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00840;old_locus_tag=CCO47_00840 NZ_CP075113.1 Protein Homology CDS 179756 180688 . - 0 ID=cds-WP_000794979.1;Parent=gene-CCO47_RS00840;Dbxref=GenBank:WP_000794979.1;Name=WP_000794979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462570.1;locus_tag=CCO47_RS00840;product=DUF4862 family protein;protein_id=WP_000794979.1;transl_table=11 NZ_CP075113.1 RefSeq gene 180712 181176 . - . ID=gene-CCO47_RS00845;Name=CCO47_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00845;old_locus_tag=CCO47_00845 NZ_CP075113.1 Protein Homology CDS 180712 181176 . - 0 ID=cds-WP_000576102.1;Parent=gene-CCO47_RS00845;Dbxref=GenBank:WP_000576102.1;Name=WP_000576102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=CCO47_RS00845;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000576102.1;transl_table=11 NZ_CP075113.1 RefSeq gene 181188 182186 . - . ID=gene-CCO47_RS00850;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=CCO47_RS00850;old_locus_tag=CCO47_00850 NZ_CP075113.1 Protein Homology CDS 181188 182186 . - 0 ID=cds-WP_000869008.1;Parent=gene-CCO47_RS00850;Dbxref=GenBank:WP_000869008.1;Name=WP_000869008.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=CCO47_RS00850;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_000869008.1;transl_table=11 NZ_CP075113.1 RefSeq gene 182416 183216 . + . ID=gene-CCO47_RS00855;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=CCO47_RS00855;old_locus_tag=CCO47_00855 NZ_CP075113.1 Protein Homology CDS 182416 183216 . + 0 ID=cds-WP_000081338.1;Parent=gene-CCO47_RS00855;Dbxref=GenBank:WP_000081338.1;Name=WP_000081338.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462567.1;locus_tag=CCO47_RS00855;product=IclR family transcriptional regulator YiaJ;protein_id=WP_000081338.1;transl_table=11 NZ_CP075113.1 RefSeq gene 183333 183806 . + . ID=gene-CCO47_RS00860;Name=CCO47_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00860;old_locus_tag=CCO47_00860 NZ_CP075113.1 Protein Homology CDS 183333 183806 . + 0 ID=cds-WP_001078822.1;Parent=gene-CCO47_RS00860;Dbxref=GenBank:WP_001078822.1;Name=WP_001078822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462566.1;locus_tag=CCO47_RS00860;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001078822.1;transl_table=11 NZ_CP075113.1 RefSeq gene 183843 185093 . - . ID=gene-CCO47_RS00865;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=CCO47_RS00865;old_locus_tag=CCO47_00865 NZ_CP075113.1 Protein Homology CDS 183843 185093 . - 0 ID=cds-WP_000144381.1;Parent=gene-CCO47_RS00865;Dbxref=GenBank:WP_000144381.1;Name=WP_000144381.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462565.1;locus_tag=CCO47_RS00865;product=valine--pyruvate transaminase;protein_id=WP_000144381.1;transl_table=11 NZ_CP075113.1 RefSeq gene 185267 187294 . - . ID=gene-CCO47_RS00870;Name=CCO47_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00870;old_locus_tag=CCO47_00870 NZ_CP075113.1 Protein Homology CDS 185267 187294 . - 0 ID=cds-WP_000761308.1;Parent=gene-CCO47_RS00870;Dbxref=GenBank:WP_000761308.1;Name=WP_000761308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=CCO47_RS00870;product=alpha-amylase;protein_id=WP_000761308.1;transl_table=11 NZ_CP075113.1 RefSeq gene 187610 188434 . + . ID=gene-CCO47_RS00875;Name=CCO47_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00875;old_locus_tag=CCO47_00875 NZ_CP075113.1 Protein Homology CDS 187610 188434 . + 0 ID=cds-WP_001575119.1;Parent=gene-CCO47_RS00875;Dbxref=GenBank:WP_001575119.1;Name=WP_001575119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=CCO47_RS00875;product=protein bax;protein_id=WP_001575119.1;transl_table=11 NZ_CP075113.1 RefSeq gene 188495 189673 . - . ID=gene-CCO47_RS00880;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=CCO47_RS00880;old_locus_tag=CCO47_00880 NZ_CP075113.1 Protein Homology CDS 188495 189673 . - 0 ID=cds-WP_000459824.1;Parent=gene-CCO47_RS00880;Dbxref=GenBank:WP_000459824.1;Name=WP_000459824.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462562.1;locus_tag=CCO47_RS00880;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_000459824.1;transl_table=11 NZ_CP075113.1 RefSeq gene 190036 191358 . + . ID=gene-CCO47_RS00885;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=CCO47_RS00885;old_locus_tag=CCO47_00885 NZ_CP075113.1 Protein Homology CDS 190036 191358 . + 0 ID=cds-WP_001149563.1;Parent=gene-CCO47_RS00885;Dbxref=GenBank:WP_001149563.1;Name=WP_001149563.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=CCO47_RS00885;product=xylose isomerase;protein_id=WP_001149563.1;transl_table=11 NZ_CP075113.1 RefSeq gene 191458 192912 . + . ID=gene-CCO47_RS00890;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=CCO47_RS00890;old_locus_tag=CCO47_00890 NZ_CP075113.1 Protein Homology CDS 191458 192912 . + 0 ID=cds-WP_000275315.1;Parent=gene-CCO47_RS00890;Dbxref=GenBank:WP_000275315.1;Name=WP_000275315.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=CCO47_RS00890;product=xylulokinase;protein_id=WP_000275315.1;transl_table=11 NZ_CP075113.1 RefSeq gene 193087 193440 . + . ID=gene-CCO47_RS00895;Name=CCO47_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00895;old_locus_tag=CCO47_00895 NZ_CP075113.1 Protein Homology CDS 193087 193440 . + 0 ID=cds-WP_000340935.1;Parent=gene-CCO47_RS00895;Dbxref=GenBank:WP_000340935.1;Name=WP_000340935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462559.1;locus_tag=CCO47_RS00895;product=YiaA/YiaB family protein;protein_id=WP_000340935.1;transl_table=11 NZ_CP075113.1 RefSeq gene 193463 194458 . - . ID=gene-CCO47_RS00900;Name=CCO47_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00900;old_locus_tag=CCO47_00900 NZ_CP075113.1 Protein Homology CDS 193463 194458 . - 0 ID=cds-WP_001182581.1;Parent=gene-CCO47_RS00900;Dbxref=GenBank:WP_001182581.1;Name=WP_001182581.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=CCO47_RS00900;product=acyltransferase;protein_id=WP_001182581.1;transl_table=11 NZ_CP075113.1 RefSeq gene 194624 194926 . + . ID=gene-CCO47_RS00905;Name=CCO47_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00905;old_locus_tag=CCO47_00905 NZ_CP075113.1 Protein Homology CDS 194624 194926 . + 0 ID=cds-WP_000605592.1;Parent=gene-CCO47_RS00905;Dbxref=GenBank:WP_000605592.1;Name=WP_000605592.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462557.1;locus_tag=CCO47_RS00905;product=YsaB family lipoprotein;protein_id=WP_000605592.1;transl_table=11 NZ_CP075113.1 RefSeq gene 195065 195976 . + . ID=gene-CCO47_RS00910;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=CCO47_RS00910;old_locus_tag=CCO47_00910 NZ_CP075113.1 Protein Homology CDS 195065 195976 . + 0 ID=cds-WP_001168551.1;Parent=gene-CCO47_RS00910;Dbxref=GenBank:WP_001168551.1;Name=WP_001168551.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462556.1;locus_tag=CCO47_RS00910;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168551.1;transl_table=11 NZ_CP075113.1 RefSeq gene 195986 198055 . + . ID=gene-CCO47_RS00915;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=CCO47_RS00915;old_locus_tag=CCO47_00915 NZ_CP075113.1 Protein Homology CDS 195986 198055 . + 0 ID=cds-WP_001291741.1;Parent=gene-CCO47_RS00915;Dbxref=GenBank:WP_001291741.1;Name=WP_001291741.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=CCO47_RS00915;product=glycine--tRNA ligase subunit beta;protein_id=WP_001291741.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 198445 198843 . + . ID=gene-CCO47_RS24045;Name=CCO47_RS24045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24045;partial=true;pseudo=true;start_range=.,198445 NZ_CP075113.1 Protein Homology CDS 198445 198843 . + 0 ID=cds-CCO47_RS24045;Parent=gene-CCO47_RS24045;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=CCO47_RS24045;partial=true;product=transposase;pseudo=true;start_range=.,198445;transl_table=11 NZ_CP075113.1 RefSeq gene 199015 199482 . + . ID=gene-CCO47_RS00925;Name=CCO47_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00925;old_locus_tag=CCO47_00925 NZ_CP075113.1 Protein Homology CDS 199015 199482 . + 0 ID=cds-WP_000702452.1;Parent=gene-CCO47_RS00925;Dbxref=GenBank:WP_000702452.1;Name=WP_000702452.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462554.1;locus_tag=CCO47_RS00925;product=GNAT family N-acetyltransferase;protein_id=WP_000702452.1;transl_table=11 NZ_CP075113.1 RefSeq gene 199660 199947 . + . ID=gene-CCO47_RS00930;Name=CCO47_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00930;old_locus_tag=CCO47_00930 NZ_CP075113.1 Protein Homology CDS 199660 199947 . + 0 ID=cds-WP_000965886.1;Parent=gene-CCO47_RS00930;Dbxref=GenBank:WP_000965886.1;Name=WP_000965886.1;Ontology_term=GO:0006355,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462553.1;locus_tag=CCO47_RS00930;product=type II toxin-antitoxin system TacA family antitoxin;protein_id=WP_000965886.1;transl_table=11 NZ_CP075113.1 RefSeq gene 199935 200420 . + . ID=gene-CCO47_RS00935;Name=CCO47_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00935;old_locus_tag=CCO47_00935 NZ_CP075113.1 Protein Homology CDS 199935 200420 . + 0 ID=cds-WP_000533909.1;Parent=gene-CCO47_RS00935;Dbxref=GenBank:WP_000533909.1;Name=WP_000533909.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462552.1;locus_tag=CCO47_RS00935;product=GNAT family N-acetyltransferase;protein_id=WP_000533909.1;transl_table=11 NZ_CP075113.1 RefSeq gene 200791 201330 . - . ID=gene-CCO47_RS00940;Name=cueP;gbkey=Gene;gene=cueP;gene_biotype=protein_coding;locus_tag=CCO47_RS00940;old_locus_tag=CCO47_00940 NZ_CP075113.1 Protein Homology CDS 200791 201330 . - 0 ID=cds-WP_000047147.1;Parent=gene-CCO47_RS00940;Dbxref=GenBank:WP_000047147.1;Name=WP_000047147.1;gbkey=CDS;gene=cueP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462551.1;locus_tag=CCO47_RS00940;product=copper-binding periplasmic metallochaperone CueP;protein_id=WP_000047147.1;transl_table=11 NZ_CP075113.1 RefSeq gene 201504 201716 . - . ID=gene-CCO47_RS00945;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO47_RS00945;old_locus_tag=CCO47_00945 NZ_CP075113.1 Protein Homology CDS 201504 201716 . - 0 ID=cds-WP_000014594.1;Parent=gene-CCO47_RS00945;Dbxref=GenBank:WP_000014594.1;Name=WP_000014594.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=CCO47_RS00945;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000014594.1;transl_table=11 NZ_CP075113.1 RefSeq gene 202004 202294 . - . ID=gene-CCO47_RS00950;Name=CCO47_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00950;old_locus_tag=CCO47_00950 NZ_CP075113.1 Protein Homology CDS 202004 202294 . - 0 ID=cds-WP_000455790.1;Parent=gene-CCO47_RS00950;Dbxref=GenBank:WP_000455790.1;Name=WP_000455790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462549.1;locus_tag=CCO47_RS00950;product=HTH-type transcriptional regulator;protein_id=WP_000455790.1;transl_table=11 NZ_CP075113.1 RefSeq gene 202733 203443 . + . ID=gene-CCO47_RS00955;Name=CCO47_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00955;old_locus_tag=CCO47_00955 NZ_CP075113.1 Protein Homology CDS 202733 203443 . + 0 ID=cds-WP_000190524.1;Parent=gene-CCO47_RS00955;Dbxref=GenBank:WP_000190524.1;Name=WP_000190524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462548.1;locus_tag=CCO47_RS00955;product=DUF3053 domain-containing protein;protein_id=WP_000190524.1;transl_table=11 NZ_CP075113.1 RefSeq gene 203493 204467 . - . ID=gene-CCO47_RS00960;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=CCO47_RS00960;old_locus_tag=CCO47_00960 NZ_CP075113.1 Protein Homology CDS 203493 204467 . - 0 ID=cds-WP_000804678.1;Parent=gene-CCO47_RS00960;Dbxref=GenBank:WP_000804678.1;Name=WP_000804678.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462547.1;locus_tag=CCO47_RS00960;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_000804678.1;transl_table=11 NZ_CP075113.1 RefSeq gene 204686 205348 . - . ID=gene-CCO47_RS00965;Name=CCO47_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00965;old_locus_tag=CCO47_00965 NZ_CP075113.1 Protein Homology CDS 204686 205348 . - 0 ID=cds-WP_000747548.1;Parent=gene-CCO47_RS00965;Dbxref=GenBank:WP_000747548.1;Name=WP_000747548.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462546.1;locus_tag=CCO47_RS00965;product=OmpA family lipoprotein;protein_id=WP_000747548.1;transl_table=11 NZ_CP075113.1 RefSeq gene 205501 207834 . + . ID=gene-CCO47_RS00970;Name=CCO47_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00970;old_locus_tag=CCO47_00970 NZ_CP075113.1 Protein Homology CDS 205501 207834 . + 0 ID=cds-WP_000148454.1;Parent=gene-CCO47_RS00970;Dbxref=GenBank:WP_000148454.1;Name=WP_000148454.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=CCO47_RS00970;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_000148454.1;transl_table=11 NZ_CP075113.1 RefSeq gene 207803 208243 . - . ID=gene-CCO47_RS00975;Name=CCO47_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00975;old_locus_tag=CCO47_00975 NZ_CP075113.1 Protein Homology CDS 207803 208243 . - 0 ID=cds-WP_000619902.1;Parent=gene-CCO47_RS00975;Dbxref=GenBank:WP_000619902.1;Name=WP_000619902.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462544.1;locus_tag=CCO47_RS00975;product=N-acetyltransferase;protein_id=WP_000619902.1;transl_table=11 NZ_CP075113.1 RefSeq gene 208221 208802 . - . ID=gene-CCO47_RS00980;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=CCO47_RS00980;old_locus_tag=CCO47_00980 NZ_CP075113.1 Protein Homology CDS 208221 208802 . - 0 ID=cds-WP_001188418.1;Parent=gene-CCO47_RS00980;Dbxref=GenBank:WP_001188418.1;Name=WP_001188418.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462543.1;locus_tag=CCO47_RS00980;product=DNA-3-methyladenine glycosylase I;protein_id=WP_001188418.1;transl_table=11 NZ_CP075113.1 RefSeq gene 208959 209663 . + . ID=gene-CCO47_RS00985;Name=CCO47_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS00985;old_locus_tag=CCO47_00985 NZ_CP075113.1 Protein Homology CDS 208959 209663 . + 0 ID=cds-WP_000637059.1;Parent=gene-CCO47_RS00985;Dbxref=GenBank:WP_000637059.1;Name=WP_000637059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462542.1;locus_tag=CCO47_RS00985;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000637059.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 209696 209821 . + . ID=gene-CCO47_RS24390;Name=CCO47_RS24390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24390;partial=true;pseudo=true;start_range=.,209696 NZ_CP075113.1 Protein Homology CDS 209696 209821 . + 0 ID=cds-CCO47_RS24390;Parent=gene-CCO47_RS24390;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204995.1;locus_tag=CCO47_RS24390;partial=true;product=oxalate/formate antiport family MFS transporter;pseudo=true;start_range=.,209696;transl_table=11 NZ_CP075113.1 RefSeq gene 210172 210696 . + . ID=gene-CCO47_RS00990;Name=lpfA;gbkey=Gene;gene=lpfA;gene_biotype=protein_coding;locus_tag=CCO47_RS00990;old_locus_tag=CCO47_00990 NZ_CP075113.1 Protein Homology CDS 210172 210696 . + 0 ID=cds-WP_001519917.1;Parent=gene-CCO47_RS00990;Dbxref=GenBank:WP_001519917.1;Name=WP_001519917.1;gbkey=CDS;gene=lpfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519917.1;locus_tag=CCO47_RS00990;product=long polar fimbria major subunit LpfA;protein_id=WP_001519917.1;transl_table=11 NZ_CP075113.1 RefSeq gene 210781 211479 . + . ID=gene-CCO47_RS00995;Name=lpfB;gbkey=Gene;gene=lpfB;gene_biotype=protein_coding;locus_tag=CCO47_RS00995;old_locus_tag=CCO47_00995 NZ_CP075113.1 Protein Homology CDS 210781 211479 . + 0 ID=cds-WP_001082123.1;Parent=gene-CCO47_RS00995;Dbxref=GenBank:WP_001082123.1;Name=WP_001082123.1;gbkey=CDS;gene=lpfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462540.1;locus_tag=CCO47_RS00995;product=long polar fimbrial chaperone LpfB;protein_id=WP_001082123.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 211502 214029 . + . ID=gene-CCO47_RS01000;Name=lpfC;gbkey=Gene;gene=lpfC;gene_biotype=pseudogene;locus_tag=CCO47_RS01000;old_locus_tag=CCO47_01000;pseudo=true NZ_CP075113.1 Protein Homology CDS 211502 214029 . + 0 ID=cds-CCO47_RS01000;Parent=gene-CCO47_RS01000;Note=frameshifted;gbkey=CDS;gene=lpfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462539.1;locus_tag=CCO47_RS01000;product=outer membrane usher protein LpfC;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 214047 215126 . + . ID=gene-CCO47_RS01005;Name=lpfD;gbkey=Gene;gene=lpfD;gene_biotype=protein_coding;locus_tag=CCO47_RS01005;old_locus_tag=CCO47_01005 NZ_CP075113.1 Protein Homology CDS 214047 215126 . + 0 ID=cds-WP_000914254.1;Parent=gene-CCO47_RS01005;Dbxref=GenBank:WP_000914254.1;Name=WP_000914254.1;gbkey=CDS;gene=lpfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462538.1;locus_tag=CCO47_RS01005;product=long polar fimbrial protein LpfD;protein_id=WP_000914254.1;transl_table=11 NZ_CP075113.1 RefSeq gene 215132 215659 . + . ID=gene-CCO47_RS01010;Name=lpfE;gbkey=Gene;gene=lpfE;gene_biotype=protein_coding;locus_tag=CCO47_RS01010;old_locus_tag=CCO47_01010 NZ_CP075113.1 Protein Homology CDS 215132 215659 . + 0 ID=cds-WP_000792957.1;Parent=gene-CCO47_RS01010;Dbxref=GenBank:WP_000792957.1;Name=WP_000792957.1;gbkey=CDS;gene=lpfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462537.1;locus_tag=CCO47_RS01010;product=long polar fimbrial protein LpfE;protein_id=WP_000792957.1;transl_table=11 NZ_CP075113.1 RefSeq gene 215877 217568 . + . ID=gene-CCO47_RS01015;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=CCO47_RS01015;old_locus_tag=CCO47_01015 NZ_CP075113.1 Protein Homology CDS 215877 217568 . + 0 ID=cds-WP_001269258.1;Parent=gene-CCO47_RS01015;Dbxref=GenBank:WP_001269258.1;Name=WP_001269258.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=CCO47_RS01015;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_001269258.1;transl_table=11 NZ_CP075113.1 RefSeq gene 217659 217735 . + . ID=gene-CCO47_RS01020;Name=CCO47_RS01020;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS01020;old_locus_tag=CCO47_01020 NZ_CP075113.1 tRNAscan-SE tRNA 217659 217735 . + . ID=rna-CCO47_RS01020;Parent=gene-CCO47_RS01020;anticodon=(pos:217693..217695);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS01020;product=tRNA-Pro NZ_CP075113.1 tRNAscan-SE exon 217659 217735 . + . ID=exon-CCO47_RS01020-1;Parent=rna-CCO47_RS01020;anticodon=(pos:217693..217695);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS01020;product=tRNA-Pro NZ_CP075113.1 RefSeq gene 217771 217904 . + . ID=gene-CCO47_RS01025;Name=CCO47_RS01025;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO47_RS01025;old_locus_tag=CCO47_01025 NZ_CP075113.1 cmsearch ncRNA 217771 217904 . + . ID=rna-CCO47_RS01025;Parent=gene-CCO47_RS01025;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS01025;product=RtT sRNA NZ_CP075113.1 cmsearch exon 217771 217904 . + . ID=exon-CCO47_RS01025-1;Parent=rna-CCO47_RS01025;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS01025;product=RtT sRNA NZ_CP075113.1 RefSeq gene 217941 218057 . + . ID=gene-CCO47_RS01030;Name=CCO47_RS01030;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO47_RS01030;old_locus_tag=CCO47_01030 NZ_CP075113.1 cmsearch ncRNA 217941 218057 . + . ID=rna-CCO47_RS01030;Parent=gene-CCO47_RS01030;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS01030;product=RtT sRNA NZ_CP075113.1 cmsearch exon 217941 218057 . + . ID=exon-CCO47_RS01030-1;Parent=rna-CCO47_RS01030;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS01030;product=RtT sRNA NZ_CP075113.1 RefSeq gene 218049 219056 . - . ID=gene-CCO47_RS01035;Name=CCO47_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01035;old_locus_tag=CCO47_01035 NZ_CP075113.1 Protein Homology CDS 218049 219056 . - 0 ID=cds-WP_000290704.1;Parent=gene-CCO47_RS01035;Dbxref=GenBank:WP_000290704.1;Name=WP_000290704.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462535.1;locus_tag=CCO47_RS01035;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000290704.1;transl_table=11 NZ_CP075113.1 RefSeq gene 219206 220330 . + . ID=gene-CCO47_RS01040;Name=CCO47_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01040;old_locus_tag=CCO47_01040 NZ_CP075113.1 Protein Homology CDS 219206 220330 . + 0 ID=cds-WP_000940815.1;Parent=gene-CCO47_RS01040;Dbxref=GenBank:WP_000940815.1;Name=WP_000940815.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462534.1;locus_tag=CCO47_RS01040;product=aryl-sulfate sulfotransferase;protein_id=WP_000940815.1;transl_table=11 NZ_CP075113.1 RefSeq gene 220388 221713 . + . ID=gene-CCO47_RS01045;Name=CCO47_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01045;old_locus_tag=CCO47_01045 NZ_CP075113.1 Protein Homology CDS 220388 221713 . + 0 ID=cds-WP_001136087.1;Parent=gene-CCO47_RS01045;Dbxref=GenBank:WP_001136087.1;Name=WP_001136087.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=CCO47_RS01045;product=uracil-xanthine permease family protein;protein_id=WP_001136087.1;transl_table=11 NZ_CP075113.1 RefSeq gene 222269 223876 . + . ID=gene-CCO47_RS01050;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=CCO47_RS01050;old_locus_tag=CCO47_01050 NZ_CP075113.1 Protein Homology CDS 222269 223876 . + 0 ID=cds-WP_000028048.1;Parent=gene-CCO47_RS01050;Dbxref=GenBank:WP_000028048.1;Name=WP_000028048.1;Ontology_term=GO:0042938,GO:0071916,GO:0030288;gbkey=CDS;gene=dppA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=CCO47_RS01050;product=dipeptide ABC transporter periplasmic-binding protein DppA;protein_id=WP_000028048.1;transl_table=11 NZ_CP075113.1 RefSeq gene 224033 225052 . + . ID=gene-CCO47_RS01055;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=CCO47_RS01055;old_locus_tag=CCO47_01055 NZ_CP075113.1 Protein Homology CDS 224033 225052 . + 0 ID=cds-WP_000938843.1;Parent=gene-CCO47_RS01055;Dbxref=GenBank:WP_000938843.1;Name=WP_000938843.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=CCO47_RS01055;product=dipeptide ABC transporter permease DppB;protein_id=WP_000938843.1;transl_table=11 NZ_CP075113.1 RefSeq gene 225062 225964 . + . ID=gene-CCO47_RS01060;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=CCO47_RS01060;old_locus_tag=CCO47_01060 NZ_CP075113.1 Protein Homology CDS 225062 225964 . + 0 ID=cds-WP_000084690.1;Parent=gene-CCO47_RS01060;Dbxref=GenBank:WP_000084690.1;Name=WP_000084690.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=CCO47_RS01060;product=dipeptide ABC transporter permease DppC;protein_id=WP_000084690.1;transl_table=11 NZ_CP075113.1 RefSeq gene 225975 226958 . + . ID=gene-CCO47_RS01065;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=CCO47_RS01065;old_locus_tag=CCO47_01065 NZ_CP075113.1 Protein Homology CDS 225975 226958 . + 0 ID=cds-WP_001196509.1;Parent=gene-CCO47_RS01065;Dbxref=GenBank:WP_001196509.1;Name=WP_001196509.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462529.1;locus_tag=CCO47_RS01065;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001196509.1;transl_table=11 NZ_CP075113.1 RefSeq gene 226955 227968 . + . ID=gene-CCO47_RS01070;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=CCO47_RS01070;old_locus_tag=CCO47_01070 NZ_CP075113.1 Protein Homology CDS 226955 227968 . + 0 ID=cds-WP_000103563.1;Parent=gene-CCO47_RS01070;Dbxref=GenBank:WP_000103563.1;Name=WP_000103563.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462528.1;locus_tag=CCO47_RS01070;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_000103563.1;transl_table=11 NZ_CP075113.1 RefSeq gene 228069 229367 . - . ID=gene-CCO47_RS01075;Name=CCO47_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01075;old_locus_tag=CCO47_01075 NZ_CP075113.1 Protein Homology CDS 228069 229367 . - 0 ID=cds-WP_001150168.1;Parent=gene-CCO47_RS01075;Dbxref=GenBank:WP_001150168.1;Name=WP_001150168.1;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462527.1;locus_tag=CCO47_RS01075;product=aromatic amino acid transport family protein;protein_id=WP_001150168.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 229485 229637 . - . ID=gene-CCO47_RS24050;Name=CCO47_RS24050;end_range=229637,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24050;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 229485 229637 . - 0 ID=cds-CCO47_RS24050;Parent=gene-CCO47_RS24050;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019346,GO:0030170;end_range=229637,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: protein motif:HMM:NF013237.7;locus_tag=CCO47_RS24050;partial=true;product=PLP-dependent transferase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 230010 230117 . + . ID=gene-CCO47_RS01085;Name=CCO47_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01085;old_locus_tag=CCO47_01085 NZ_CP075113.1 Protein Homology CDS 230010 230117 . + 0 ID=cds-WP_001669334.1;Parent=gene-CCO47_RS01085;Dbxref=GenBank:WP_001669334.1;Name=WP_001669334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141634.1;locus_tag=CCO47_RS01085;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001669334.1;transl_table=11 NZ_CP075113.1 RefSeq gene 230199 231878 . - . ID=gene-CCO47_RS01090;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=CCO47_RS01090;old_locus_tag=CCO47_01090 NZ_CP075113.1 Protein Homology CDS 230199 231878 . - 0 ID=cds-WP_000192026.1;Parent=gene-CCO47_RS01090;Dbxref=GenBank:WP_000192026.1;Name=WP_000192026.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462525.1;locus_tag=CCO47_RS01090;product=cellulose biosynthesis protein BcsG;protein_id=WP_000192026.1;transl_table=11 NZ_CP075113.1 RefSeq gene 231875 232066 . - . ID=gene-CCO47_RS01095;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=CCO47_RS01095;old_locus_tag=CCO47_01095 NZ_CP075113.1 Protein Homology CDS 231875 232066 . - 0 ID=cds-WP_000988321.1;Parent=gene-CCO47_RS01095;Dbxref=GenBank:WP_000988321.1;Name=WP_000988321.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462524.1;locus_tag=CCO47_RS01095;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988321.1;transl_table=11 NZ_CP075113.1 RefSeq gene 232063 233634 . - . ID=gene-CCO47_RS01100;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=CCO47_RS01100;old_locus_tag=CCO47_01100 NZ_CP075113.1 Protein Homology CDS 232063 233634 . - 0 ID=cds-WP_001205767.1;Parent=gene-CCO47_RS01100;Dbxref=GenBank:WP_001205767.1;Name=WP_001205767.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462523.1;locus_tag=CCO47_RS01100;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WP_001205767.1;transl_table=11 NZ_CP075113.1 RefSeq gene 233879 234082 . + . ID=gene-CCO47_RS01105;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=CCO47_RS01105;old_locus_tag=CCO47_01105 NZ_CP075113.1 Protein Homology CDS 233879 234082 . + 0 ID=cds-WP_000282616.1;Parent=gene-CCO47_RS01105;Dbxref=GenBank:WP_000282616.1;Name=WP_000282616.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462522.1;locus_tag=CCO47_RS01105;product=cellulose biosynthesis protein BcsR;protein_id=WP_000282616.1;transl_table=11 NZ_CP075113.1 RefSeq gene 234083 234835 . + . ID=gene-CCO47_RS01110;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=CCO47_RS01110;old_locus_tag=CCO47_01110 NZ_CP075113.1 Protein Homology CDS 234083 234835 . + 0 ID=cds-WP_000996128.1;Parent=gene-CCO47_RS01110;Dbxref=GenBank:WP_000996128.1;Name=WP_000996128.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462521.1;locus_tag=CCO47_RS01110;product=cellulose biosynthesis protein BcsQ;protein_id=WP_000996128.1;transl_table=11 NZ_CP075113.1 RefSeq gene 234832 237456 . + . ID=gene-CCO47_RS01115;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=CCO47_RS01115;old_locus_tag=CCO47_01115 NZ_CP075113.1 Protein Homology CDS 234832 237456 . + 0 ID=cds-WP_001275324.1;Parent=gene-CCO47_RS01115;Dbxref=GenBank:WP_001275324.1;Name=WP_001275324.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=CCO47_RS01115;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_001275324.1;transl_table=11 NZ_CP075113.1 RefSeq gene 237467 239767 . + . ID=gene-CCO47_RS01120;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=CCO47_RS01120;old_locus_tag=CCO47_01120 NZ_CP075113.1 Protein Homology CDS 237467 239767 . + 0 ID=cds-WP_000823816.1;Parent=gene-CCO47_RS01120;Dbxref=GenBank:WP_000823816.1;Name=WP_000823816.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462519.1;locus_tag=CCO47_RS01120;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_000823816.1;transl_table=11 NZ_CP075113.1 RefSeq gene 239771 240880 . + . ID=gene-CCO47_RS01125;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=CCO47_RS01125;old_locus_tag=CCO47_01125 NZ_CP075113.1 Protein Homology CDS 239771 240880 . + 0 ID=cds-WP_000988803.1;Parent=gene-CCO47_RS01125;Dbxref=GenBank:WP_000988803.1;Name=WP_000988803.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462518.1;locus_tag=CCO47_RS01125;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_000988803.1;transl_table=11 NZ_CP075113.1 RefSeq gene 240862 244404 . + . ID=gene-CCO47_RS01130;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=CCO47_RS01130;old_locus_tag=CCO47_01130 NZ_CP075113.1 Protein Homology CDS 240862 244404 . + 0 ID=cds-WP_001225215.1;Parent=gene-CCO47_RS01130;Dbxref=GenBank:WP_001225215.1;Name=WP_001225215.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=CCO47_RS01130;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_001225215.1;transl_table=11 NZ_CP075113.1 RefSeq gene 244578 246584 . + . ID=gene-CCO47_RS01135;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=CCO47_RS01135;old_locus_tag=CCO47_01135 NZ_CP075113.1 Protein Homology CDS 244578 246584 . + 0 ID=cds-WP_001266347.1;Parent=gene-CCO47_RS01135;Dbxref=GenBank:WP_001266347.1;Name=WP_001266347.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=CCO47_RS01135;product=biofilm formation regulator HmsP;protein_id=WP_001266347.1;transl_table=11 NZ_CP075113.1 RefSeq gene 246742 248028 . + . ID=gene-CCO47_RS01140;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=CCO47_RS01140;old_locus_tag=CCO47_01140 NZ_CP075113.1 Protein Homology CDS 246742 248028 . + 0 ID=cds-WP_000858228.1;Parent=gene-CCO47_RS01140;Dbxref=GenBank:WP_000858228.1;Name=WP_000858228.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462515.1;locus_tag=CCO47_RS01140;product=C4-dicarboxylate transporter DctC;protein_id=WP_000858228.1;transl_table=11 NZ_CP075113.1 RefSeq gene 248248 249735 . + . ID=gene-CCO47_RS01145;Name=CCO47_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01145;old_locus_tag=CCO47_01145 NZ_CP075113.1 Protein Homology CDS 248248 249735 . + 0 ID=cds-WP_001163182.1;Parent=gene-CCO47_RS01145;Dbxref=GenBank:WP_001163182.1;Name=WP_001163182.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=CCO47_RS01145;product=M16 family metallopeptidase;protein_id=WP_001163182.1;transl_table=11 NZ_CP075113.1 RefSeq gene 249789 250718 . - . ID=gene-CCO47_RS01150;Name=kdgK;gbkey=Gene;gene=kdgK;gene_biotype=protein_coding;locus_tag=CCO47_RS01150;old_locus_tag=CCO47_01150 NZ_CP075113.1 Protein Homology CDS 249789 250718 . - 0 ID=cds-WP_000037586.1;Parent=gene-CCO47_RS01150;Dbxref=GenBank:WP_000037586.1;Name=WP_000037586.1;Ontology_term=GO:0000166,GO:0005524,GO:0008673;gbkey=CDS;gene=kdgK;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,2-dehydro-3-deoxygluconokinase activity|0008673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462513.1;locus_tag=CCO47_RS01150;product=2-dehydro-3-deoxygluconokinase;protein_id=WP_000037586.1;transl_table=11 NZ_CP075113.1 RefSeq gene 250947 251714 . + . ID=gene-CCO47_RS01155;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=CCO47_RS01155;old_locus_tag=CCO47_01155 NZ_CP075113.1 Protein Homology CDS 250947 251714 . + 0 ID=cds-WP_000595624.1;Parent=gene-CCO47_RS01155;Dbxref=GenBank:WP_000595624.1;Name=WP_000595624.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=CCO47_RS01155;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_000595624.1;transl_table=11 NZ_CP075113.1 RefSeq gene 251824 253884 . + . ID=gene-CCO47_RS01160;Name=CCO47_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01160;old_locus_tag=CCO47_01160 NZ_CP075113.1 Protein Homology CDS 251824 253884 . + 0 ID=cds-WP_000158685.1;Parent=gene-CCO47_RS01160;Dbxref=GenBank:WP_000158685.1;Name=WP_000158685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=CCO47_RS01160;product=AsmA family protein;protein_id=WP_000158685.1;transl_table=11 NZ_CP075113.1 RefSeq gene 253924 255246 . - . ID=gene-CCO47_RS01165;Name=CCO47_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01165;old_locus_tag=CCO47_01165 NZ_CP075113.1 Protein Homology CDS 253924 255246 . - 0 ID=cds-WP_001148981.1;Parent=gene-CCO47_RS01165;Dbxref=GenBank:WP_001148981.1;Name=WP_001148981.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462510.1;locus_tag=CCO47_RS01165;product=MFS transporter;protein_id=WP_001148981.1;transl_table=11 NZ_CP075113.1 RefSeq gene 255597 256625 . - . ID=gene-CCO47_RS01170;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=CCO47_RS01170;old_locus_tag=CCO47_01170 NZ_CP075113.1 Protein Homology CDS 255597 256625 . - 0 ID=cds-WP_000191231.1;Parent=gene-CCO47_RS01170;Dbxref=GenBank:WP_000191231.1;Name=WP_000191231.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462509.1;locus_tag=CCO47_RS01170;product=inner membrane protein YhjD;protein_id=WP_000191231.1;transl_table=11 NZ_CP075113.1 RefSeq gene 256698 257597 . - . ID=gene-CCO47_RS01175;Name=CCO47_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01175;old_locus_tag=CCO47_01175 NZ_CP075113.1 Protein Homology CDS 256698 257597 . - 0 ID=cds-WP_000358044.1;Parent=gene-CCO47_RS01175;Dbxref=GenBank:WP_000358044.1;Name=WP_000358044.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462508.1;locus_tag=CCO47_RS01175;product=LysR family transcriptional regulator;protein_id=WP_000358044.1;transl_table=11 NZ_CP075113.1 RefSeq gene 258228 258830 . + . ID=gene-CCO47_RS01180;Name=CCO47_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01180;old_locus_tag=CCO47_01180 NZ_CP075113.1 Protein Homology CDS 258228 258830 . + 0 ID=cds-WP_001196089.1;Parent=gene-CCO47_RS01180;Dbxref=GenBank:WP_001196089.1;Name=WP_001196089.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462507.1;locus_tag=CCO47_RS01180;product=response regulator transcription factor;protein_id=WP_001196089.1;transl_table=11 NZ_CP075113.1 RefSeq gene 258836 259192 . - . ID=gene-CCO47_RS01185;Name=CCO47_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01185;old_locus_tag=CCO47_01185 NZ_CP075113.1 Protein Homology CDS 258836 259192 . - 0 ID=cds-WP_001120249.1;Parent=gene-CCO47_RS01185;Dbxref=GenBank:WP_001120249.1;Name=WP_001120249.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462506.1;locus_tag=CCO47_RS01185;product=glycoside hydrolase family protein;protein_id=WP_001120249.1;transl_table=11 NZ_CP075113.1 RefSeq gene 259473 261062 . + . ID=gene-CCO47_RS01190;Name=CCO47_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01190;old_locus_tag=CCO47_01190 NZ_CP075113.1 Protein Homology CDS 259473 261062 . + 0 ID=cds-WP_094912389.1;Parent=gene-CCO47_RS01190;Dbxref=GenBank:WP_094912389.1;Name=WP_094912389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=CCO47_RS01190;product=STY4199 family HEPN domain-containing protein;protein_id=WP_094912389.1;transl_table=11 NZ_CP075113.1 RefSeq gene 261075 262724 . - . ID=gene-CCO47_RS01195;Name=CCO47_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01195;old_locus_tag=CCO47_01195 NZ_CP075113.1 Protein Homology CDS 261075 262724 . - 0 ID=cds-WP_000934257.1;Parent=gene-CCO47_RS01195;Dbxref=GenBank:WP_000934257.1;Name=WP_000934257.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=CCO47_RS01195;product=alpha%2Calpha-trehalase;protein_id=WP_000934257.1;transl_table=11 NZ_CP075113.1 RefSeq gene 263050 263769 . + . ID=gene-CCO47_RS01200;Name=CCO47_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01200;old_locus_tag=CCO47_01200 NZ_CP075113.1 Protein Homology CDS 263050 263769 . + 0 ID=cds-WP_000572566.1;Parent=gene-CCO47_RS01200;Dbxref=GenBank:WP_000572566.1;Name=WP_000572566.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=CCO47_RS01200;product=GntR family transcriptional regulator;protein_id=WP_000572566.1;transl_table=11 NZ_CP075113.1 RefSeq gene 263945 264922 . + . ID=gene-CCO47_RS01205;Name=fraB;gbkey=Gene;gene=fraB;gene_biotype=protein_coding;locus_tag=CCO47_RS01205;old_locus_tag=CCO47_01205 NZ_CP075113.1 Protein Homology CDS 263945 264922 . + 0 ID=cds-WP_012539922.1;Parent=gene-CCO47_RS01205;Dbxref=GenBank:WP_012539922.1;Name=WP_012539922.1;gbkey=CDS;gene=fraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462502.1;locus_tag=CCO47_RS01205;product=6-phosphofructose-aspartate deglycase;protein_id=WP_012539922.1;transl_table=11 NZ_CP075113.1 RefSeq gene 264986 265831 . + . ID=gene-CCO47_RS01210;Name=fraD;gbkey=Gene;gene=fraD;gene_biotype=protein_coding;locus_tag=CCO47_RS01210;old_locus_tag=CCO47_01210 NZ_CP075113.1 Protein Homology CDS 264986 265831 . + 0 ID=cds-WP_000028433.1;Parent=gene-CCO47_RS01210;Dbxref=GenBank:WP_000028433.1;Name=WP_000028433.1;gbkey=CDS;gene=fraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462501.1;locus_tag=CCO47_RS01210;product=fructose-aspartate kinase;protein_id=WP_000028433.1;transl_table=11 NZ_CP075113.1 RefSeq gene 265885 267204 . + . ID=gene-CCO47_RS01215;Name=CCO47_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01215;old_locus_tag=CCO47_01215 NZ_CP075113.1 Protein Homology CDS 265885 267204 . + 0 ID=cds-WP_000498936.1;Parent=gene-CCO47_RS01215;Dbxref=GenBank:WP_000498936.1;Name=WP_000498936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=CCO47_RS01215;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WP_000498936.1;transl_table=11 NZ_CP075113.1 RefSeq gene 267263 268306 . + . ID=gene-CCO47_RS01220;Name=fraE;gbkey=Gene;gene=fraE;gene_biotype=protein_coding;locus_tag=CCO47_RS01220;old_locus_tag=CCO47_01220 NZ_CP075113.1 Protein Homology CDS 267263 268306 . + 0 ID=cds-WP_000702752.1;Parent=gene-CCO47_RS01220;Dbxref=GenBank:WP_000702752.1;Name=WP_000702752.1;gbkey=CDS;gene=fraE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=CCO47_RS01220;product=fructose-asparagine asparaginase;protein_id=WP_000702752.1;transl_table=11 NZ_CP075113.1 RefSeq gene 268353 269705 . - . ID=gene-CCO47_RS01225;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=CCO47_RS01225;old_locus_tag=CCO47_01225 NZ_CP075113.1 Protein Homology CDS 268353 269705 . - 0 ID=cds-WP_000160778.1;Parent=gene-CCO47_RS01225;Dbxref=GenBank:WP_000160778.1;Name=WP_000160778.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=CCO47_RS01225;product=glutathione-disulfide reductase;protein_id=WP_000160778.1;transl_table=11 NZ_CP075113.1 RefSeq gene 269810 270652 . - . ID=gene-CCO47_RS01230;Name=CCO47_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01230;old_locus_tag=CCO47_01230 NZ_CP075113.1 Protein Homology CDS 269810 270652 . - 0 ID=cds-WP_000954238.1;Parent=gene-CCO47_RS01230;Dbxref=GenBank:WP_000954238.1;Name=WP_000954238.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=CCO47_RS01230;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_000954238.1;transl_table=11 NZ_CP075113.1 RefSeq gene 270863 272134 . + . ID=gene-CCO47_RS01235;Name=CCO47_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01235;old_locus_tag=CCO47_01235 NZ_CP075113.1 Protein Homology CDS 270863 272134 . + 0 ID=cds-WP_000766155.1;Parent=gene-CCO47_RS01235;Dbxref=GenBank:WP_000766155.1;Name=WP_000766155.1;Ontology_term=GO:0016311,GO:0003993;gbkey=CDS;go_function=acid phosphatase activity|0003993||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462496.1;locus_tag=CCO47_RS01235;product=acid phosphatase;protein_id=WP_000766155.1;transl_table=11 NZ_CP075113.1 RefSeq gene 272316 274358 . + . ID=gene-CCO47_RS01240;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=CCO47_RS01240;old_locus_tag=CCO47_01240 NZ_CP075113.1 Protein Homology CDS 272316 274358 . + 0 ID=cds-WP_000184178.1;Parent=gene-CCO47_RS01240;Dbxref=GenBank:WP_000184178.1;Name=WP_000184178.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=CCO47_RS01240;product=oligopeptidase A;protein_id=WP_000184178.1;transl_table=11 NZ_CP075113.1 RefSeq gene 274365 275123 . + . ID=gene-CCO47_RS01245;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=CCO47_RS01245;old_locus_tag=CCO47_01245 NZ_CP075113.1 Protein Homology CDS 274365 275123 . + 0 ID=cds-WP_001165127.1;Parent=gene-CCO47_RS01245;Dbxref=GenBank:WP_001165127.1;Name=WP_001165127.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=CCO47_RS01245;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_001165127.1;transl_table=11 NZ_CP075113.1 RefSeq gene 275215 276687 . - . ID=gene-CCO47_RS01250;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=CCO47_RS01250;old_locus_tag=CCO47_01250 NZ_CP075113.1 Protein Homology CDS 275215 276687 . - 0 ID=cds-WP_001098282.1;Parent=gene-CCO47_RS01250;Dbxref=GenBank:WP_001098282.1;Name=WP_001098282.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=CCO47_RS01250;product=dipeptide/tripeptide permease DtpB;protein_id=WP_001098282.1;transl_table=11 NZ_CP075113.1 RefSeq gene 277011 277445 . - . ID=gene-CCO47_RS01255;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=CCO47_RS01255;old_locus_tag=CCO47_01255 NZ_CP075113.1 Protein Homology CDS 277011 277445 . - 0 ID=cds-WP_000323565.1;Parent=gene-CCO47_RS01255;Dbxref=GenBank:WP_000323565.1;Name=WP_000323565.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462492.1;locus_tag=CCO47_RS01255;product=universal stress protein UspA;protein_id=WP_000323565.1;transl_table=11 NZ_CP075113.1 RefSeq gene 277833 278168 . + . ID=gene-CCO47_RS01260;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=CCO47_RS01260;old_locus_tag=CCO47_01260 NZ_CP075113.1 Protein Homology CDS 277833 278168 . + 0 ID=cds-WP_000626193.1;Parent=gene-CCO47_RS01260;Dbxref=GenBank:WP_000626193.1;Name=WP_000626193.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462491.1;locus_tag=CCO47_RS01260;product=universal stress protein UspB;protein_id=WP_000626193.1;transl_table=11 NZ_CP075113.1 RefSeq gene 278309 279805 . - . ID=gene-CCO47_RS01265;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=CCO47_RS01265;old_locus_tag=CCO47_01265 NZ_CP075113.1 Protein Homology CDS 278309 279805 . - 0 ID=cds-WP_094912392.1;Parent=gene-CCO47_RS01265;Dbxref=GenBank:WP_094912392.1;Name=WP_094912392.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462490.1;locus_tag=CCO47_RS01265;product=inorganic phosphate transporter PitA;protein_id=WP_094912392.1;transl_table=11 NZ_CP075113.1 RefSeq gene 280036 281232 . + . ID=gene-CCO47_RS01270;Name=CCO47_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01270;old_locus_tag=CCO47_01270 NZ_CP075113.1 Protein Homology CDS 280036 281232 . + 0 ID=cds-WP_000439236.1;Parent=gene-CCO47_RS01270;Dbxref=GenBank:WP_000439236.1;Name=WP_000439236.1;Ontology_term=GO:0016628,GO:0050660,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462489.1;locus_tag=CCO47_RS01270;product=BaiN/RdsA family NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000439236.1;transl_table=11 NZ_CP075113.1 RefSeq gene 281538 282605 . + . ID=gene-CCO47_RS01275;Name=CCO47_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01275;old_locus_tag=CCO47_01275 NZ_CP075113.1 Protein Homology CDS 281538 282605 . + 0 ID=cds-WP_000359843.1;Parent=gene-CCO47_RS01275;Dbxref=GenBank:WP_000359843.1;Name=WP_000359843.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462488.1;locus_tag=CCO47_RS01275;product=HlyD family secretion protein;protein_id=WP_000359843.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 282602 285338 . + . ID=gene-CCO47_RS01280;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=pseudogene;locus_tag=CCO47_RS01280;old_locus_tag=CCO47_01280;pseudo=true NZ_CP075113.1 Protein Homology CDS 282602 285338 . + 0 ID=cds-CCO47_RS01280;Parent=gene-CCO47_RS01280;Note=frameshifted;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312386.2;locus_tag=CCO47_RS01280;product=ribosome-associated ATPase/putative transporter RbbA;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 285338 286462 . + . ID=gene-CCO47_RS01285;Name=CCO47_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01285;old_locus_tag=CCO47_01285 NZ_CP075113.1 Protein Homology CDS 285338 286462 . + 0 ID=cds-WP_001214762.1;Parent=gene-CCO47_RS01285;Dbxref=GenBank:WP_001214762.1;Name=WP_001214762.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=CCO47_RS01285;product=ABC transporter permease;protein_id=WP_001214762.1;transl_table=11 NZ_CP075113.1 RefSeq gene 286552 286953 . - . ID=gene-CCO47_RS01290;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=CCO47_RS01290;old_locus_tag=CCO47_01290 NZ_CP075113.1 Protein Homology CDS 286552 286953 . - 0 ID=cds-WP_001190057.1;Parent=gene-CCO47_RS01290;Dbxref=GenBank:WP_001190057.1;Name=WP_001190057.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462485.1;locus_tag=CCO47_RS01290;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_001190057.1;transl_table=11 NZ_CP075113.1 RefSeq gene 287044 287622 . - . ID=gene-CCO47_RS01295;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=CCO47_RS01295;old_locus_tag=CCO47_01295 NZ_CP075113.1 Protein Homology CDS 287044 287622 . - 0 ID=cds-WP_000284365.1;Parent=gene-CCO47_RS01295;Dbxref=GenBank:WP_000284365.1;Name=WP_000284365.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462484.1;locus_tag=CCO47_RS01295;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_000284365.1;transl_table=11 NZ_CP075113.1 RefSeq gene 287674 288723 . - . ID=gene-CCO47_RS01300;Name=CCO47_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01300;old_locus_tag=CCO47_01300 NZ_CP075113.1 Protein Homology CDS 287674 288723 . - 0 ID=cds-WP_000179593.1;Parent=gene-CCO47_RS01300;Dbxref=GenBank:WP_000179593.1;Name=WP_000179593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=CCO47_RS01300;product=AI-2E family transporter;protein_id=WP_000179593.1;transl_table=11 NZ_CP075113.1 RefSeq gene 288813 290072 . + . ID=gene-CCO47_RS01305;Name=CCO47_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01305;old_locus_tag=CCO47_01305 NZ_CP075113.1 Protein Homology CDS 288813 290072 . + 0 ID=cds-WP_001751762.1;Parent=gene-CCO47_RS01305;Dbxref=GenBank:WP_001751762.1;Name=WP_001751762.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462482.3;locus_tag=CCO47_RS01305;product=MFS transporter;protein_id=WP_001751762.1;transl_table=11 NZ_CP075113.1 RefSeq gene 290076 290633 . - . ID=gene-CCO47_RS01310;Name=CCO47_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01310;old_locus_tag=CCO47_01310 NZ_CP075113.1 Protein Homology CDS 290076 290633 . - 0 ID=cds-WP_001245277.1;Parent=gene-CCO47_RS01310;Dbxref=GenBank:WP_001245277.1;Name=WP_001245277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462481.1;locus_tag=CCO47_RS01310;product=DcrB family lipoprotein;protein_id=WP_001245277.1;transl_table=11 NZ_CP075113.1 RefSeq gene 290706 291371 . - . ID=gene-CCO47_RS01315;Name=CCO47_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01315;old_locus_tag=CCO47_01315 NZ_CP075113.1 Protein Homology CDS 290706 291371 . - 0 ID=cds-WP_001518097.1;Parent=gene-CCO47_RS01315;Dbxref=GenBank:WP_001518097.1;Name=WP_001518097.1;Ontology_term=GO:0160254;gbkey=CDS;go_process=tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors|0160254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462480.1;locus_tag=CCO47_RS01315;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_001518097.1;transl_table=11 NZ_CP075113.1 RefSeq gene 291541 291786 . + . ID=gene-CCO47_RS01320;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=CCO47_RS01320;old_locus_tag=CCO47_01320 NZ_CP075113.1 Protein Homology CDS 291541 291786 . + 0 ID=cds-WP_001541054.1;Parent=gene-CCO47_RS01320;Dbxref=GenBank:WP_001541054.1;Name=WP_001541054.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462479.1;locus_tag=CCO47_RS01320;product=sulfurtransferase TusA;protein_id=WP_001541054.1;transl_table=11 NZ_CP075113.1 RefSeq gene 291810 293453 . - . ID=gene-CCO47_RS01325;Name=tcp;gbkey=Gene;gene=tcp;gene_biotype=protein_coding;locus_tag=CCO47_RS01325;old_locus_tag=CCO47_01325 NZ_CP075113.1 Protein Homology CDS 291810 293453 . - 0 ID=cds-WP_000789675.1;Parent=gene-CCO47_RS01325;Dbxref=GenBank:WP_000789675.1;Name=WP_000789675.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888;gbkey=CDS;gene=tcp;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462478.1;locus_tag=CCO47_RS01325;product=methyl-accepting chemotaxis citrate transducer;protein_id=WP_000789675.1;transl_table=11 NZ_CP075113.1 RefSeq gene 293653 295851 . - . ID=gene-CCO47_RS01330;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=CCO47_RS01330;old_locus_tag=CCO47_01330 NZ_CP075113.1 Protein Homology CDS 293653 295851 . - 0 ID=cds-WP_000106650.1;Parent=gene-CCO47_RS01330;Dbxref=GenBank:WP_000106650.1;Name=WP_000106650.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462477.1;locus_tag=CCO47_RS01330;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_000106650.1;transl_table=11 NZ_CP075113.1 RefSeq gene 295932 296558 . - . ID=gene-CCO47_RS01335;Name=CCO47_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01335;old_locus_tag=CCO47_01335 NZ_CP075113.1 Protein Homology CDS 295932 296558 . - 0 ID=cds-WP_000964735.1;Parent=gene-CCO47_RS01335;Dbxref=GenBank:WP_000964735.1;Name=WP_000964735.1;Ontology_term=GO:0006629,GO:0016787,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462476.1;locus_tag=CCO47_RS01335;product=lysoplasmalogenase;protein_id=WP_000964735.1;transl_table=11 NZ_CP075113.1 RefSeq gene 296700 297071 . + . ID=gene-CCO47_RS01340;Name=CCO47_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01340;old_locus_tag=CCO47_01340 NZ_CP075113.1 Protein Homology CDS 296700 297071 . + 0 ID=cds-WP_000042859.1;Parent=gene-CCO47_RS01340;Dbxref=GenBank:WP_000042859.1;Name=WP_000042859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462475.1;locus_tag=CCO47_RS01340;product=DUF2500 domain-containing protein;protein_id=WP_000042859.1;transl_table=11 NZ_CP075113.1 RefSeq gene 297093 297362 . - . ID=gene-CCO47_RS01345;Name=CCO47_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01345;old_locus_tag=CCO47_01345 NZ_CP075113.1 Protein Homology CDS 297093 297362 . - 0 ID=cds-WP_000906757.1;Parent=gene-CCO47_RS01345;Dbxref=GenBank:WP_000906757.1;Name=WP_000906757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=CCO47_RS01345;product=DUF1145 family protein;protein_id=WP_000906757.1;transl_table=11 NZ_CP075113.1 RefSeq gene 297352 297948 . - . ID=gene-CCO47_RS01350;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=CCO47_RS01350;old_locus_tag=CCO47_01350 NZ_CP075113.1 Protein Homology CDS 297352 297948 . - 0 ID=cds-WP_000743277.1;Parent=gene-CCO47_RS01350;Dbxref=GenBank:WP_000743277.1;Name=WP_000743277.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462473.1;locus_tag=CCO47_RS01350;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_000743277.1;transl_table=11 NZ_CP075113.1 RefSeq gene 298074 299549 . + . ID=gene-CCO47_RS01355;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=CCO47_RS01355;old_locus_tag=CCO47_01355 NZ_CP075113.1 Protein Homology CDS 298074 299549 . + 0 ID=cds-WP_001118687.1;Parent=gene-CCO47_RS01355;Dbxref=GenBank:WP_001118687.1;Name=WP_001118687.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462472.1;locus_tag=CCO47_RS01355;product=signal recognition particle-docking protein FtsY;protein_id=WP_001118687.1;transl_table=11 NZ_CP075113.1 RefSeq gene 299552 300220 . + . ID=gene-CCO47_RS01360;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=CCO47_RS01360;old_locus_tag=CCO47_01360 NZ_CP075113.1 Protein Homology CDS 299552 300220 . + 0 ID=cds-WP_000617729.1;Parent=gene-CCO47_RS01360;Dbxref=GenBank:WP_000617729.1;Name=WP_000617729.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462471.1;locus_tag=CCO47_RS01360;product=cell division ATP-binding protein FtsE;protein_id=WP_000617729.1;transl_table=11 NZ_CP075113.1 RefSeq gene 300213 301268 . + . ID=gene-CCO47_RS01365;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=CCO47_RS01365;old_locus_tag=CCO47_01365 NZ_CP075113.1 Protein Homology CDS 300213 301268 . + 0 ID=cds-WP_001081707.1;Parent=gene-CCO47_RS01365;Dbxref=GenBank:WP_001081707.1;Name=WP_001081707.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=CCO47_RS01365;product=permease-like cell division protein FtsX;protein_id=WP_001081707.1;transl_table=11 NZ_CP075113.1 RefSeq gene 301514 302368 . + . ID=gene-CCO47_RS01370;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=CCO47_RS01370;old_locus_tag=CCO47_01370 NZ_CP075113.1 Protein Homology CDS 301514 302368 . + 0 ID=cds-WP_000159621.1;Parent=gene-CCO47_RS01370;Dbxref=GenBank:WP_000159621.1;Name=WP_000159621.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462469.1;locus_tag=CCO47_RS01370;product=RNA polymerase sigma factor RpoH;protein_id=WP_000159621.1;transl_table=11 NZ_CP075113.1 RefSeq gene 302690 303793 . + . ID=gene-CCO47_RS01375;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=CCO47_RS01375;old_locus_tag=CCO47_01375 NZ_CP075113.1 Protein Homology CDS 302690 303793 . + 0 ID=cds-WP_001839269.1;Parent=gene-CCO47_RS01375;Dbxref=GenBank:WP_001839269.1;Name=WP_001839269.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229277.1;locus_tag=CCO47_RS01375;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_001839269.1;transl_table=11 NZ_CP075113.1 RefSeq gene 303877 304011 . - . ID=gene-CCO47_RS01380;Name=CCO47_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01380;old_locus_tag=CCO47_01380 NZ_CP075113.1 Protein Homology CDS 303877 304011 . - 0 ID=cds-WP_001517957.1;Parent=gene-CCO47_RS01380;Dbxref=GenBank:WP_001517957.1;Name=WP_001517957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462467.1;locus_tag=CCO47_RS01380;product=hypothetical protein;protein_id=WP_001517957.1;transl_table=11 NZ_CP075113.1 RefSeq gene 303989 304372 . - . ID=gene-CCO47_RS01385;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=CCO47_RS01385;old_locus_tag=CCO47_01385 NZ_CP075113.1 Protein Homology CDS 303989 304372 . - 0 ID=cds-WP_000778873.1;Parent=gene-CCO47_RS01385;Dbxref=GenBank:WP_000778873.1;Name=WP_000778873.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462466.1;locus_tag=CCO47_RS01385;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_000778873.1;transl_table=11 NZ_CP075113.1 RefSeq gene 304794 305903 . + . ID=gene-CCO47_RS01390;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=CCO47_RS01390;old_locus_tag=CCO47_01390 NZ_CP075113.1 Protein Homology CDS 304794 305903 . + 0 ID=cds-WP_000822976.1;Parent=gene-CCO47_RS01390;Dbxref=GenBank:WP_000822976.1;Name=WP_000822976.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462465.1;locus_tag=CCO47_RS01390;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_000822976.1;transl_table=11 NZ_CP075113.1 RefSeq gene 305963 306889 . + . ID=gene-CCO47_RS01395;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=CCO47_RS01395;old_locus_tag=CCO47_01395 NZ_CP075113.1 Protein Homology CDS 305963 306889 . + 0 ID=cds-WP_000003007.1;Parent=gene-CCO47_RS01395;Dbxref=GenBank:WP_000003007.1;Name=WP_000003007.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=CCO47_RS01395;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_000003007.1;transl_table=11 NZ_CP075113.1 RefSeq gene 306886 308163 . + . ID=gene-CCO47_RS01400;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=CCO47_RS01400;old_locus_tag=CCO47_01400 NZ_CP075113.1 Protein Homology CDS 306886 308163 . + 0 ID=cds-WP_000803764.1;Parent=gene-CCO47_RS01400;Dbxref=GenBank:WP_000803764.1;Name=WP_000803764.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462463.1;locus_tag=CCO47_RS01400;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_000803764.1;transl_table=11 NZ_CP075113.1 RefSeq gene 308160 308927 . + . ID=gene-CCO47_RS01405;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=CCO47_RS01405;old_locus_tag=CCO47_01405 NZ_CP075113.1 Protein Homology CDS 308160 308927 . + 0 ID=cds-WP_000082080.1;Parent=gene-CCO47_RS01405;Dbxref=GenBank:WP_000082080.1;Name=WP_000082080.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=CCO47_RS01405;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_000082080.1;transl_table=11 NZ_CP075113.1 RefSeq gene 308929 309642 . + . ID=gene-CCO47_RS01410;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=CCO47_RS01410;old_locus_tag=CCO47_01410 NZ_CP075113.1 Protein Homology CDS 308929 309642 . + 0 ID=cds-WP_000416114.1;Parent=gene-CCO47_RS01410;Dbxref=GenBank:WP_000416114.1;Name=WP_000416114.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462461.1;locus_tag=CCO47_RS01410;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416114.1;transl_table=11 NZ_CP075113.1 RefSeq gene 309773 309994 . + . ID=gene-CCO47_RS01415;Name=CCO47_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01415;old_locus_tag=CCO47_01415 NZ_CP075113.1 Protein Homology CDS 309773 309994 . + 0 ID=cds-WP_001520924.1;Parent=gene-CCO47_RS01415;Dbxref=GenBank:WP_001520924.1;Name=WP_001520924.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229268.1;locus_tag=CCO47_RS01415;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_001520924.1;transl_table=11 NZ_CP075113.1 RefSeq gene 309991 310359 . + . ID=gene-CCO47_RS01420;Name=CCO47_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01420;old_locus_tag=CCO47_01420 NZ_CP075113.1 Protein Homology CDS 309991 310359 . + 0 ID=cds-WP_001575091.1;Parent=gene-CCO47_RS01420;Dbxref=GenBank:WP_001575091.1;Name=WP_001575091.1;Ontology_term=GO:0016301,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=kinase activity|0016301||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462459.1;locus_tag=CCO47_RS01420;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WP_001575091.1;transl_table=11 NZ_CP075113.1 RefSeq gene 310618 311934 . + . ID=gene-CCO47_RS01425;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=CCO47_RS01425;old_locus_tag=CCO47_01425 NZ_CP075113.1 Protein Homology CDS 310618 311934 . + 0 ID=cds-WP_000624752.1;Parent=gene-CCO47_RS01425;Dbxref=GenBank:WP_000624752.1;Name=WP_000624752.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462458.1;locus_tag=CCO47_RS01425;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_000624752.1;transl_table=11 NZ_CP075113.1 RefSeq gene 312039 312926 . + . ID=gene-CCO47_RS01430;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=CCO47_RS01430;old_locus_tag=CCO47_01430 NZ_CP075113.1 Protein Homology CDS 312039 312926 . + 0 ID=cds-WP_000099303.1;Parent=gene-CCO47_RS01430;Dbxref=GenBank:WP_000099303.1;Name=WP_000099303.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=CCO47_RS01430;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_000099303.1;transl_table=11 NZ_CP075113.1 RefSeq gene 312923 313768 . + . ID=gene-CCO47_RS01435;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=CCO47_RS01435;old_locus_tag=CCO47_01435 NZ_CP075113.1 Protein Homology CDS 312923 313768 . + 0 ID=cds-WP_000572196.1;Parent=gene-CCO47_RS01435;Dbxref=GenBank:WP_000572196.1;Name=WP_000572196.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=CCO47_RS01435;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_000572196.1;transl_table=11 NZ_CP075113.1 RefSeq gene 313770 314840 . + . ID=gene-CCO47_RS01440;Name=CCO47_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01440;old_locus_tag=CCO47_01440 NZ_CP075113.1 Protein Homology CDS 313770 314840 . + 0 ID=cds-WP_000907846.1;Parent=gene-CCO47_RS01440;Dbxref=GenBank:WP_000907846.1;Name=WP_000907846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462455.1;locus_tag=CCO47_RS01440;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_000907846.1;transl_table=11 NZ_CP075113.1 RefSeq gene 314837 315577 . + . ID=gene-CCO47_RS01445;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=CCO47_RS01445;old_locus_tag=CCO47_01445 NZ_CP075113.1 Protein Homology CDS 314837 315577 . + 0 ID=cds-WP_000073545.1;Parent=gene-CCO47_RS01445;Dbxref=GenBank:WP_000073545.1;Name=WP_000073545.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462454.1;locus_tag=CCO47_RS01445;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000073545.1;transl_table=11 NZ_CP075113.1 RefSeq gene 315574 315990 . - . ID=gene-CCO47_RS01450;Name=CCO47_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01450;old_locus_tag=CCO47_01450 NZ_CP075113.1 Protein Homology CDS 315574 315990 . - 0 ID=cds-WP_000826041.1;Parent=gene-CCO47_RS01450;Dbxref=GenBank:WP_000826041.1;Name=WP_000826041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462453.1;locus_tag=CCO47_RS01450;product=DUF2756 family protein;protein_id=WP_000826041.1;transl_table=11 NZ_CP075113.1 RefSeq gene 316116 317858 . + . ID=gene-CCO47_RS01455;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=CCO47_RS01455;old_locus_tag=CCO47_01455 NZ_CP075113.1 Protein Homology CDS 316116 317858 . + 0 ID=cds-WP_000805110.1;Parent=gene-CCO47_RS01455;Dbxref=GenBank:WP_000805110.1;Name=WP_000805110.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione gamma-glutamate hydrolase|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=CCO47_RS01455;product=gamma-glutamyltransferase;protein_id=WP_000805110.1;transl_table=11 NZ_CP075113.1 RefSeq gene 317903 318937 . - . ID=gene-CCO47_RS01460;Name=CCO47_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01460;old_locus_tag=CCO47_01460 NZ_CP075113.1 Protein Homology CDS 317903 318937 . - 0 ID=cds-WP_000675710.1;Parent=gene-CCO47_RS01460;Dbxref=GenBank:WP_000675710.1;Name=WP_000675710.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=CCO47_RS01460;product=phosphotriesterase family protein;protein_id=WP_000675710.1;transl_table=11 NZ_CP075113.1 RefSeq gene 318934 319905 . - . ID=gene-CCO47_RS01465;Name=CCO47_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01465;old_locus_tag=CCO47_01465 NZ_CP075113.1 Protein Homology CDS 318934 319905 . - 0 ID=cds-WP_001038949.1;Parent=gene-CCO47_RS01465;Dbxref=GenBank:WP_001038949.1;Name=WP_001038949.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462450.1;locus_tag=CCO47_RS01465;product=DMT family transporter;protein_id=WP_001038949.1;transl_table=11 NZ_CP075113.1 RefSeq gene 319959 320720 . - . ID=gene-CCO47_RS01470;Name=CCO47_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01470;old_locus_tag=CCO47_01470 NZ_CP075113.1 Protein Homology CDS 319959 320720 . - 0 ID=cds-WP_001066509.1;Parent=gene-CCO47_RS01470;Dbxref=GenBank:WP_001066509.1;Name=WP_001066509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=CCO47_RS01470;product=glutamine amidotransferase;protein_id=WP_001066509.1;transl_table=11 NZ_CP075113.1 RefSeq gene 320736 321950 . - . ID=gene-CCO47_RS01475;Name=CCO47_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01475;old_locus_tag=CCO47_01475 NZ_CP075113.1 Protein Homology CDS 320736 321950 . - 0 ID=cds-WP_000667443.1;Parent=gene-CCO47_RS01475;Dbxref=GenBank:WP_000667443.1;Name=WP_000667443.1;Ontology_term=GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=CCO47_RS01475;product=PfkB family carbohydrate kinase;protein_id=WP_000667443.1;transl_table=11 NZ_CP075113.1 RefSeq gene 322215 322703 . - . ID=gene-CCO47_RS01480;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=CCO47_RS01480;old_locus_tag=CCO47_01480 NZ_CP075113.1 Protein Homology CDS 322215 322703 . - 0 ID=cds-WP_001290278.1;Parent=gene-CCO47_RS01480;Dbxref=GenBank:WP_001290278.1;Name=WP_001290278.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462447.1;locus_tag=CCO47_RS01480;product=N-acetyltransferase;protein_id=WP_001290278.1;transl_table=11 NZ_CP075113.1 RefSeq gene 323170 324207 . + . ID=gene-CCO47_RS01485;Name=CCO47_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01485;old_locus_tag=CCO47_01485 NZ_CP075113.1 Protein Homology CDS 323170 324207 . + 0 ID=cds-WP_000172394.1;Parent=gene-CCO47_RS01485;Dbxref=GenBank:WP_000172394.1;Name=WP_000172394.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=CCO47_RS01485;product=oxidoreductase;protein_id=WP_000172394.1;transl_table=11 NZ_CP075113.1 RefSeq gene 324331 325026 . + . ID=gene-CCO47_RS01490;Name=CCO47_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01490;old_locus_tag=CCO47_01490 NZ_CP075113.1 Protein Homology CDS 324331 325026 . + 0 ID=cds-WP_000639789.1;Parent=gene-CCO47_RS01490;Dbxref=GenBank:WP_000639789.1;Name=WP_000639789.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=CCO47_RS01490;product=pirin family protein;protein_id=WP_000639789.1;transl_table=11 NZ_CP075113.1 RefSeq gene 325156 326151 . + . ID=gene-CCO47_RS01495;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=CCO47_RS01495;old_locus_tag=CCO47_01495 NZ_CP075113.1 Protein Homology CDS 325156 326151 . + 0 ID=cds-WP_000730239.1;Parent=gene-CCO47_RS01495;Dbxref=GenBank:WP_000730239.1;Name=WP_000730239.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=CCO47_RS01495;product=gluconate operon transcriptional repressor GntR;protein_id=WP_000730239.1;transl_table=11 NZ_CP075113.1 RefSeq gene 326290 326823 . + . ID=gene-CCO47_RS01500;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=CCO47_RS01500;old_locus_tag=CCO47_01500 NZ_CP075113.1 Protein Homology CDS 326290 326823 . + 0 ID=cds-WP_000108344.1;Parent=gene-CCO47_RS01500;Dbxref=GenBank:WP_000108344.1;Name=WP_000108344.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462443.1;locus_tag=CCO47_RS01500;product=gluconokinase;protein_id=WP_000108344.1;transl_table=11 NZ_CP075113.1 RefSeq gene 326820 328160 . + . ID=gene-CCO47_RS01505;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=CCO47_RS01505;old_locus_tag=CCO47_01505 NZ_CP075113.1 Protein Homology CDS 326820 328160 . + 0 ID=cds-WP_000105954.1;Parent=gene-CCO47_RS01505;Dbxref=GenBank:WP_000105954.1;Name=WP_000105954.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462442.1;locus_tag=CCO47_RS01505;product=gluconate transporter;protein_id=WP_000105954.1;transl_table=11 NZ_CP075113.1 RefSeq gene 328077 328457 . - . ID=gene-CCO47_RS01510;Name=CCO47_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01510;old_locus_tag=CCO47_01510 NZ_CP075113.1 Protein Homology CDS 328077 328457 . - 0 ID=cds-WP_001675843.1;Parent=gene-CCO47_RS01510;Dbxref=GenBank:WP_001675843.1;Name=WP_001675843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_452851.1;locus_tag=CCO47_RS01510;product=MarC family protein;protein_id=WP_001675843.1;transl_table=11 NZ_CP075113.1 RefSeq gene 328584 329690 . + . ID=gene-CCO47_RS01515;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=CCO47_RS01515;old_locus_tag=CCO47_01515 NZ_CP075113.1 Protein Homology CDS 328584 329690 . + 0 ID=cds-WP_000799940.1;Parent=gene-CCO47_RS01515;Dbxref=GenBank:WP_000799940.1;Name=WP_000799940.1;Ontology_term=GO:0009088,GO:0009089,GO:0009097,GO:0071265,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=L-threonine biosynthetic process|0009088||IEA,L-lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA,L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462440.1;locus_tag=CCO47_RS01515;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799940.1;transl_table=11 NZ_CP075113.1 RefSeq gene 330038 332224 . + . ID=gene-CCO47_RS01520;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=CCO47_RS01520;old_locus_tag=CCO47_01520 NZ_CP075113.1 Protein Homology CDS 330038 332224 . + 0 ID=cds-WP_000098546.1;Parent=gene-CCO47_RS01520;Dbxref=GenBank:WP_000098546.1;Name=WP_000098546.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462439.1;locus_tag=CCO47_RS01520;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_000098546.1;transl_table=11 NZ_CP075113.1 RefSeq gene 332221 334197 . + . ID=gene-CCO47_RS01525;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=CCO47_RS01525;old_locus_tag=CCO47_01525 NZ_CP075113.1 Protein Homology CDS 332221 334197 . + 0 ID=cds-WP_000192485.1;Parent=gene-CCO47_RS01525;Dbxref=GenBank:WP_000192485.1;Name=WP_000192485.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=CCO47_RS01525;product=glycogen debranching protein GlgX;protein_id=WP_000192485.1;transl_table=11 NZ_CP075113.1 RefSeq gene 334212 335507 . + . ID=gene-CCO47_RS01530;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=CCO47_RS01530;old_locus_tag=CCO47_01530 NZ_CP075113.1 Protein Homology CDS 334212 335507 . + 0 ID=cds-WP_000253991.1;Parent=gene-CCO47_RS01530;Dbxref=GenBank:WP_000253991.1;Name=WP_000253991.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462437.1;locus_tag=CCO47_RS01530;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253991.1;transl_table=11 NZ_CP075113.1 RefSeq gene 335507 336940 . + . ID=gene-CCO47_RS01535;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=CCO47_RS01535;old_locus_tag=CCO47_01535 NZ_CP075113.1 Protein Homology CDS 335507 336940 . + 0 ID=cds-WP_001197669.1;Parent=gene-CCO47_RS01535;Dbxref=GenBank:WP_001197669.1;Name=WP_001197669.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=CCO47_RS01535;product=glycogen synthase GlgA;protein_id=WP_001197669.1;transl_table=11 NZ_CP075113.1 RefSeq gene 336960 339407 . + . ID=gene-CCO47_RS01540;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=CCO47_RS01540;old_locus_tag=CCO47_01540 NZ_CP075113.1 Protein Homology CDS 336960 339407 . + 0 ID=cds-WP_000993424.1;Parent=gene-CCO47_RS01540;Dbxref=GenBank:WP_000993424.1;Name=WP_000993424.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=CCO47_RS01540;product=glycogen phosphorylase;protein_id=WP_000993424.1;transl_table=11 NZ_CP075113.1 RefSeq gene 339585 340340 . + . ID=gene-CCO47_RS01545;Name=CCO47_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01545;old_locus_tag=CCO47_01545 NZ_CP075113.1 Protein Homology CDS 339585 340340 . + 0 ID=cds-WP_000724553.1;Parent=gene-CCO47_RS01545;Dbxref=GenBank:WP_000724553.1;Name=WP_000724553.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462434.1;locus_tag=CCO47_RS01545;product=IclR family transcriptional regulator;protein_id=WP_000724553.1;transl_table=11 NZ_CP075113.1 RefSeq gene 340384 341289 . - . ID=gene-CCO47_RS01550;Name=CCO47_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01550;old_locus_tag=CCO47_01550 NZ_CP075113.1 Protein Homology CDS 340384 341289 . - 0 ID=cds-WP_000192193.1;Parent=gene-CCO47_RS01550;Dbxref=GenBank:WP_000192193.1;Name=WP_000192193.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462433.1;locus_tag=CCO47_RS01550;product=dihydrodipicolinate synthase family protein;protein_id=WP_000192193.1;transl_table=11 NZ_CP075113.1 RefSeq gene 341333 343048 . - . ID=gene-CCO47_RS01555;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=CCO47_RS01555;old_locus_tag=CCO47_01555 NZ_CP075113.1 Protein Homology CDS 341333 343048 . - 0 ID=cds-WP_000078495.1;Parent=gene-CCO47_RS01555;Dbxref=GenBank:WP_000078495.1;Name=WP_000078495.1;Ontology_term=GO:0009097,GO:0009099,GO:0000287,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=magnesium ion binding|0000287||IEA,dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,L-valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462432.1;locus_tag=CCO47_RS01555;product=dihydroxy-acid dehydratase;protein_id=WP_000078495.1;transl_table=11 NZ_CP075113.1 RefSeq gene 343045 344379 . - . ID=gene-CCO47_RS01560;Name=CCO47_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01560;old_locus_tag=CCO47_01560 NZ_CP075113.1 Protein Homology CDS 343045 344379 . - 0 ID=cds-WP_001575086.1;Parent=gene-CCO47_RS01560;Dbxref=GenBank:WP_001575086.1;Name=WP_001575086.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001653833.1;locus_tag=CCO47_RS01560;product=MFS transporter;protein_id=WP_001575086.1;transl_table=11 NZ_CP075113.1 RefSeq gene 344717 345826 . + . ID=gene-CCO47_RS01565;Name=CCO47_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01565;old_locus_tag=CCO47_01565 NZ_CP075113.1 Protein Homology CDS 344717 345826 . + 0 ID=cds-WP_000258840.1;Parent=gene-CCO47_RS01565;Dbxref=GenBank:WP_000258840.1;Name=WP_000258840.1;Ontology_term=GO:0008270,GO:0008888,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,glycerol dehydrogenase (NAD+) activity|0008888||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462431.1;locus_tag=CCO47_RS01565;product=glycerol dehydrogenase;protein_id=WP_000258840.1;transl_table=11 NZ_CP075113.1 RefSeq gene 345984 347480 . + . ID=gene-CCO47_RS01570;Name=CCO47_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01570;old_locus_tag=CCO47_01570 NZ_CP075113.1 Protein Homology CDS 345984 347480 . + 0 ID=cds-WP_000786185.1;Parent=gene-CCO47_RS01570;Dbxref=GenBank:WP_000786185.1;Name=WP_000786185.1;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000786181.1;locus_tag=CCO47_RS01570;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_000786185.1;transl_table=11 NZ_CP075113.1 RefSeq gene 347490 348035 . + . ID=gene-CCO47_RS01575;Name=CCO47_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01575;old_locus_tag=CCO47_01575 NZ_CP075113.1 Protein Homology CDS 347490 348035 . + 0 ID=cds-WP_000393233.1;Parent=gene-CCO47_RS01575;Dbxref=GenBank:WP_000393233.1;Name=WP_000393233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462429.1;locus_tag=CCO47_RS01575;product=YbbD family protein;protein_id=WP_000393233.1;transl_table=11 NZ_CP075113.1 RefSeq gene 348082 349590 . - . ID=gene-CCO47_RS01580;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=CCO47_RS01580;old_locus_tag=CCO47_01580 NZ_CP075113.1 Protein Homology CDS 348082 349590 . - 0 ID=cds-WP_000448179.1;Parent=gene-CCO47_RS01580;Dbxref=GenBank:WP_000448179.1;Name=WP_000448179.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462428.1;locus_tag=CCO47_RS01580;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_000448179.1;transl_table=11 NZ_CP075113.1 RefSeq gene 349789 350115 . + . ID=gene-CCO47_RS01585;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=CCO47_RS01585;old_locus_tag=CCO47_01585 NZ_CP075113.1 Protein Homology CDS 349789 350115 . + 0 ID=cds-WP_000434523.1;Parent=gene-CCO47_RS01585;Dbxref=GenBank:WP_000434523.1;Name=WP_000434523.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462427.1;locus_tag=CCO47_RS01585;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000434523.1;transl_table=11 NZ_CP075113.1 RefSeq gene 350191 351021 . + . ID=gene-CCO47_RS01590;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=CCO47_RS01590;old_locus_tag=CCO47_01590 NZ_CP075113.1 Protein Homology CDS 350191 351021 . + 0 ID=cds-WP_000928699.1;Parent=gene-CCO47_RS01590;Dbxref=GenBank:WP_000928699.1;Name=WP_000928699.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462426.1;locus_tag=CCO47_RS01590;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_000928699.1;transl_table=11 NZ_CP075113.1 RefSeq gene 351115 351873 . + . ID=gene-CCO47_RS01595;Name=CCO47_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01595;old_locus_tag=CCO47_01595 NZ_CP075113.1 Protein Homology CDS 351115 351873 . + 0 ID=cds-WP_000815085.1;Parent=gene-CCO47_RS01595;Dbxref=GenBank:WP_000815085.1;Name=WP_000815085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=CCO47_RS01595;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815085.1;transl_table=11 NZ_CP075113.1 RefSeq gene 351870 353453 . - . ID=gene-CCO47_RS01600;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=CCO47_RS01600;old_locus_tag=CCO47_01600 NZ_CP075113.1 Protein Homology CDS 351870 353453 . - 0 ID=cds-WP_001232870.1;Parent=gene-CCO47_RS01600;Dbxref=GenBank:WP_001232870.1;Name=WP_001232870.1;Ontology_term=GO:0006355,GO:0003700,GO:0005524,GO:0008134;gbkey=CDS;gene=rtcR;go_function=DNA-binding transcription factor activity|0003700||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462424.1;locus_tag=CCO47_RS01600;product=RNA repair transcriptional activator RtcR;protein_id=WP_001232870.1;transl_table=11 NZ_CP075113.1 RefSeq gene 353643 355196 . + . ID=gene-CCO47_RS01605;Name=CCO47_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01605;old_locus_tag=CCO47_01605 NZ_CP075113.1 Protein Homology CDS 353643 355196 . + 0 ID=cds-WP_000013013.1;Parent=gene-CCO47_RS01605;Dbxref=GenBank:WP_000013013.1;Name=WP_000013013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462423.1;locus_tag=CCO47_RS01605;product=vWA domain-containing protein;protein_id=WP_000013013.1;transl_table=11 NZ_CP075113.1 RefSeq gene 355544 356758 . + . ID=gene-CCO47_RS01610;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=CCO47_RS01610;old_locus_tag=CCO47_01610 NZ_CP075113.1 Protein Homology CDS 355544 356758 . + 0 ID=cds-WP_001105533.1;Parent=gene-CCO47_RS01610;Dbxref=GenBank:WP_001105533.1;Name=WP_001105533.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=CCO47_RS01610;product=RNA-splicing ligase RtcB;protein_id=WP_001105533.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 356762 357773 . + . ID=gene-CCO47_RS01615;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=pseudogene;locus_tag=CCO47_RS01615;old_locus_tag=CCO47_01615;pseudo=true NZ_CP075113.1 Protein Homology CDS 356762 357773 . + 0 ID=cds-CCO47_RS01615;Parent=gene-CCO47_RS01615;Note=frameshifted;Ontology_term=GO:0006396,GO:0003963;gbkey=CDS;gene=rtcA;go_function=RNA-3'-phosphate cyclase activity|0003963||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462421.1;locus_tag=CCO47_RS01615;product=RNA 3'-terminal phosphate cyclase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 357882 358142 . + . ID=gene-CCO47_RS01620;Name=CCO47_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01620;old_locus_tag=CCO47_01620 NZ_CP075113.1 Protein Homology CDS 357882 358142 . + 0 ID=cds-WP_000729713.1;Parent=gene-CCO47_RS01620;Dbxref=GenBank:WP_000729713.1;Name=WP_000729713.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462420.1;locus_tag=CCO47_RS01620;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_000729713.1;transl_table=11 NZ_CP075113.1 RefSeq gene 358145 358420 . + . ID=gene-CCO47_RS01625;Name=CCO47_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01625;old_locus_tag=CCO47_01625 NZ_CP075113.1 Protein Homology CDS 358145 358420 . + 0 ID=cds-WP_001526148.1;Parent=gene-CCO47_RS01625;Dbxref=GenBank:WP_001526148.1;Name=WP_001526148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462419.1;locus_tag=CCO47_RS01625;product=type II toxin-antitoxin system YafQ family toxin;protein_id=WP_001526148.1;transl_table=11 NZ_CP075113.1 RefSeq gene 358508 361213 . - . ID=gene-CCO47_RS01630;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=CCO47_RS01630;old_locus_tag=CCO47_01630 NZ_CP075113.1 Protein Homology CDS 358508 361213 . - 0 ID=cds-WP_080182532.1;Parent=gene-CCO47_RS01630;Dbxref=GenBank:WP_080182532.1;Name=WP_080182532.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=CCO47_RS01630;product=HTH-type transcriptional regulator MalT;protein_id=WP_080182532.1;transl_table=11 NZ_CP075113.1 RefSeq gene 361807 364200 . + . ID=gene-CCO47_RS01635;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=CCO47_RS01635;old_locus_tag=CCO47_01635 NZ_CP075113.1 Protein Homology CDS 361807 364200 . + 0 ID=cds-WP_000082245.1;Parent=gene-CCO47_RS01635;Dbxref=GenBank:WP_000082245.1;Name=WP_000082245.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=CCO47_RS01635;product=maltodextrin phosphorylase;protein_id=WP_000082245.1;transl_table=11 NZ_CP075113.1 RefSeq gene 364210 366288 . + . ID=gene-CCO47_RS01640;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=CCO47_RS01640;old_locus_tag=CCO47_01640 NZ_CP075113.1 Protein Homology CDS 364210 366288 . + 0 ID=cds-WP_000428737.1;Parent=gene-CCO47_RS01640;Dbxref=GenBank:WP_000428737.1;Name=WP_000428737.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462416.1;locus_tag=CCO47_RS01640;product=4-alpha-glucanotransferase;protein_id=WP_000428737.1;transl_table=11 NZ_CP075113.1 RefSeq gene 366407 367723 . - . ID=gene-CCO47_RS01645;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=CCO47_RS01645;old_locus_tag=CCO47_01645 NZ_CP075113.1 Protein Homology CDS 366407 367723 . - 0 ID=cds-WP_001131741.1;Parent=gene-CCO47_RS01645;Dbxref=GenBank:WP_001131741.1;Name=WP_001131741.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462415.1;locus_tag=CCO47_RS01645;product=gluconate transporter;protein_id=WP_001131741.1;transl_table=11 NZ_CP075113.1 RefSeq gene 368100 368675 . - . ID=gene-CCO47_RS01650;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=CCO47_RS01650;old_locus_tag=CCO47_01650 NZ_CP075113.1 Protein Homology CDS 368100 368675 . - 0 ID=cds-WP_000619387.1;Parent=gene-CCO47_RS01650;Dbxref=GenBank:WP_000619387.1;Name=WP_000619387.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=CCO47_RS01650;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619387.1;transl_table=11 NZ_CP075113.1 RefSeq gene 368734 369417 . - . ID=gene-CCO47_RS01655;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=CCO47_RS01655;old_locus_tag=CCO47_01655 NZ_CP075113.1 Protein Homology CDS 368734 369417 . - 0 ID=cds-WP_000958734.1;Parent=gene-CCO47_RS01655;Dbxref=GenBank:WP_000958734.1;Name=WP_000958734.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462413.1;locus_tag=CCO47_RS01655;product=DNA utilization protein GntX;protein_id=WP_000958734.1;transl_table=11 NZ_CP075113.1 RefSeq gene 369455 370225 . + . ID=gene-CCO47_RS01660;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=CCO47_RS01660;old_locus_tag=CCO47_01660 NZ_CP075113.1 Protein Homology CDS 369455 370225 . + 0 ID=cds-WP_000998146.1;Parent=gene-CCO47_RS01660;Dbxref=GenBank:WP_000998146.1;Name=WP_000998146.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462412.1;locus_tag=CCO47_RS01660;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_000998146.1;transl_table=11 NZ_CP075113.1 RefSeq gene 370261 371187 . - . ID=gene-CCO47_RS01665;Name=CCO47_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01665;old_locus_tag=CCO47_01665 NZ_CP075113.1 Protein Homology CDS 370261 371187 . - 0 ID=cds-WP_000235956.1;Parent=gene-CCO47_RS01665;Dbxref=GenBank:WP_000235956.1;Name=WP_000235956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462411.1;locus_tag=CCO47_RS01665;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000235956.1;transl_table=11 NZ_CP075113.1 RefSeq gene 371422 371658 . - . ID=gene-CCO47_RS01670;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=CCO47_RS01670;old_locus_tag=CCO47_01670 NZ_CP075113.1 Protein Homology CDS 371422 371658 . - 0 ID=cds-WP_000157587.1;Parent=gene-CCO47_RS01670;Dbxref=GenBank:WP_000157587.1;Name=WP_000157587.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462410.1;locus_tag=CCO47_RS01670;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_000157587.1;transl_table=11 NZ_CP075113.1 RefSeq gene 371671 373989 . - . ID=gene-CCO47_RS01675;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=CCO47_RS01675;old_locus_tag=CCO47_01675 NZ_CP075113.1 Protein Homology CDS 371671 373989 . - 0 ID=cds-WP_000736979.1;Parent=gene-CCO47_RS01675;Dbxref=GenBank:WP_000736979.1;Name=WP_000736979.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=CCO47_RS01675;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_000736979.1;transl_table=11 NZ_CP075113.1 RefSeq gene 374008 374235 . - . ID=gene-CCO47_RS01680;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=CCO47_RS01680;old_locus_tag=CCO47_01680 NZ_CP075113.1 Protein Homology CDS 374008 374235 . - 0 ID=cds-WP_001160955.1;Parent=gene-CCO47_RS01680;Dbxref=GenBank:WP_001160955.1;Name=WP_001160955.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462408.1;locus_tag=CCO47_RS01680;product=ferrous iron transporter A;protein_id=WP_001160955.1;transl_table=11 NZ_CP075113.1 RefSeq gene 374672 377002 . - . ID=gene-CCO47_RS01685;Name=CCO47_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01685;old_locus_tag=CCO47_01685 NZ_CP075113.1 Protein Homology CDS 374672 377002 . - 0 ID=cds-WP_000980659.1;Parent=gene-CCO47_RS01685;Dbxref=GenBank:WP_000980659.1;Name=WP_000980659.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312276.2;locus_tag=CCO47_RS01685;product=Tex family protein;protein_id=WP_000980659.1;transl_table=11 NZ_CP075113.1 RefSeq gene 377101 377574 . - . ID=gene-CCO47_RS01690;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=CCO47_RS01690;old_locus_tag=CCO47_01690 NZ_CP075113.1 Protein Homology CDS 377101 377574 . - 0 ID=cds-WP_000856695.1;Parent=gene-CCO47_RS01690;Dbxref=GenBank:WP_000856695.1;Name=WP_000856695.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=CCO47_RS01690;product=transcription elongation factor GreB;protein_id=WP_000856695.1;transl_table=11 NZ_CP075113.1 RefSeq gene 377800 378519 . + . ID=gene-CCO47_RS01695;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=CCO47_RS01695;old_locus_tag=CCO47_01695 NZ_CP075113.1 Protein Homology CDS 377800 378519 . + 0 ID=cds-WP_001157751.1;Parent=gene-CCO47_RS01695;Dbxref=GenBank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374840.1;locus_tag=CCO47_RS01695;product=osmolarity response regulator transcription factor OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_CP075113.1 RefSeq gene 378516 379868 . + . ID=gene-CCO47_RS01700;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=CCO47_RS01700;old_locus_tag=CCO47_01700 NZ_CP075113.1 Protein Homology CDS 378516 379868 . + 0 ID=cds-WP_001253818.1;Parent=gene-CCO47_RS01700;Dbxref=GenBank:WP_001253818.1;Name=WP_001253818.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=CCO47_RS01700;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_001253818.1;transl_table=11 NZ_CP075113.1 RefSeq gene 379943 381562 . - . ID=gene-CCO47_RS01705;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=CCO47_RS01705;old_locus_tag=CCO47_01705 NZ_CP075113.1 Protein Homology CDS 379943 381562 . - 0 ID=cds-WP_001265689.1;Parent=gene-CCO47_RS01705;Dbxref=GenBank:WP_001265689.1;Name=WP_001265689.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462403.2;locus_tag=CCO47_RS01705;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_001265689.1;transl_table=11 NZ_CP075113.1 RefSeq gene 381942 383651 . + . ID=gene-CCO47_RS01710;Name=CCO47_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01710;old_locus_tag=CCO47_01710 NZ_CP075113.1 Protein Homology CDS 381942 383651 . + 0 ID=cds-WP_000446451.1;Parent=gene-CCO47_RS01710;Dbxref=GenBank:WP_000446451.1;Name=WP_000446451.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462402.1;locus_tag=CCO47_RS01710;product=DUF4153 domain-containing protein;protein_id=WP_000446451.1;transl_table=11 NZ_CP075113.1 RefSeq gene 383762 384640 . - . ID=gene-CCO47_RS01715;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=CCO47_RS01715;old_locus_tag=CCO47_01715 NZ_CP075113.1 Protein Homology CDS 383762 384640 . - 0 ID=cds-WP_001675842.1;Parent=gene-CCO47_RS01715;Dbxref=GenBank:WP_001675842.1;Name=WP_001675842.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=CCO47_RS01715;product=Hsp33 family molecular chaperone HslO;protein_id=WP_001675842.1;transl_table=11 NZ_CP075113.1 RefSeq gene 384665 385066 . - . ID=gene-CCO47_RS01720;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=CCO47_RS01720;old_locus_tag=CCO47_01720 NZ_CP075113.1 Protein Homology CDS 384665 385066 . - 0 ID=cds-WP_000660723.1;Parent=gene-CCO47_RS01720;Dbxref=GenBank:WP_000660723.1;Name=WP_000660723.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462400.1;locus_tag=CCO47_RS01720;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_000660723.1;transl_table=11 NZ_CP075113.1 RefSeq gene 385077 385745 . - . ID=gene-CCO47_RS01725;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=CCO47_RS01725;old_locus_tag=CCO47_01725 NZ_CP075113.1 Protein Homology CDS 385077 385745 . - 0 ID=cds-WP_001520508.1;Parent=gene-CCO47_RS01725;Dbxref=GenBank:WP_001520508.1;Name=WP_001520508.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462399.1;locus_tag=CCO47_RS01725;product=GMP/IMP nucleotidase;protein_id=WP_001520508.1;transl_table=11 NZ_CP075113.1 RefSeq gene 385810 387942 . - . ID=gene-CCO47_RS01730;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=CCO47_RS01730;old_locus_tag=CCO47_01730 NZ_CP075113.1 Protein Homology CDS 385810 387942 . - 0 ID=cds-WP_000104101.1;Parent=gene-CCO47_RS01730;Dbxref=GenBank:WP_000104101.1;Name=WP_000104101.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462398.1;locus_tag=CCO47_RS01730;product=intracellular growth attenuator protein IgaA;protein_id=WP_000104101.1;transl_table=11 NZ_CP075113.1 RefSeq gene 388265 388828 . + . ID=gene-CCO47_RS01735;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=CCO47_RS01735;old_locus_tag=CCO47_01735 NZ_CP075113.1 Protein Homology CDS 388265 388828 . + 0 ID=cds-WP_000045725.1;Parent=gene-CCO47_RS01735;Dbxref=GenBank:WP_000045725.1;Name=WP_000045725.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045725.1;locus_tag=CCO47_RS01735;product=ADP compounds hydrolase NudE;protein_id=WP_000045725.1;transl_table=11 NZ_CP075113.1 RefSeq gene 388924 391476 . - . ID=gene-CCO47_RS01740;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=CCO47_RS01740;old_locus_tag=CCO47_01740 NZ_CP075113.1 Protein Homology CDS 388924 391476 . - 0 ID=cds-WP_000673820.1;Parent=gene-CCO47_RS01740;Dbxref=GenBank:WP_000673820.1;Name=WP_000673820.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=CCO47_RS01740;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_000673820.1;transl_table=11 NZ_CP075113.1 RefSeq gene 391597 392376 . + . ID=gene-CCO47_RS01745;Name=CCO47_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01745;old_locus_tag=CCO47_01745 NZ_CP075113.1 Protein Homology CDS 391597 392376 . + 0 ID=cds-WP_000874747.1;Parent=gene-CCO47_RS01745;Dbxref=GenBank:WP_000874747.1;Name=WP_000874747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462395.1;locus_tag=CCO47_RS01745;product=hypothetical protein;protein_id=WP_000874747.1;transl_table=11 NZ_CP075113.1 RefSeq gene 392376 392915 . + . ID=gene-CCO47_RS01750;Name=CCO47_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01750;old_locus_tag=CCO47_01750 NZ_CP075113.1 Protein Homology CDS 392376 392915 . + 0 ID=cds-WP_000951390.1;Parent=gene-CCO47_RS01750;Dbxref=GenBank:WP_000951390.1;Name=WP_000951390.1;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462394.1;locus_tag=CCO47_RS01750;product=PilN domain-containing protein;protein_id=WP_000951390.1;transl_table=11 NZ_CP075113.1 RefSeq gene 392899 393372 . + . ID=gene-CCO47_RS01755;Name=CCO47_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01755;old_locus_tag=CCO47_01755 NZ_CP075113.1 Protein Homology CDS 392899 393372 . + 0 ID=cds-WP_000992493.1;Parent=gene-CCO47_RS01755;Dbxref=GenBank:WP_000992493.1;Name=WP_000992493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462393.1;locus_tag=CCO47_RS01755;product=HofO family protein;protein_id=WP_000992493.1;transl_table=11 NZ_CP075113.1 RefSeq gene 393362 393763 . + . ID=gene-CCO47_RS01760;Name=CCO47_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01760;old_locus_tag=CCO47_01760 NZ_CP075113.1 Protein Homology CDS 393362 393763 . + 0 ID=cds-WP_000648133.1;Parent=gene-CCO47_RS01760;Dbxref=GenBank:WP_000648133.1;Name=WP_000648133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462392.1;locus_tag=CCO47_RS01760;product=DUF2531 family protein;protein_id=WP_000648133.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 393678 394917 . + . ID=gene-CCO47_RS01765;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=pseudogene;locus_tag=CCO47_RS01765;old_locus_tag=CCO47_01765;pseudo=true NZ_CP075113.1 Protein Homology CDS 393678 394917 . + 0 ID=cds-CCO47_RS01765;Parent=gene-CCO47_RS01765;Note=frameshifted;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462391.1;locus_tag=CCO47_RS01765;product=DNA uptake porin HofQ;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 395382 395903 . + . ID=gene-CCO47_RS01770;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=CCO47_RS01770;old_locus_tag=CCO47_01770 NZ_CP075113.1 Protein Homology CDS 395382 395903 . + 0 ID=cds-WP_000818621.1;Parent=gene-CCO47_RS01770;Dbxref=GenBank:WP_000818621.1;Name=WP_000818621.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=CCO47_RS01770;product=shikimate kinase AroK;protein_id=WP_000818621.1;transl_table=11 NZ_CP075113.1 RefSeq gene 395960 397048 . + . ID=gene-CCO47_RS01775;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=CCO47_RS01775;old_locus_tag=CCO47_01775 NZ_CP075113.1 Protein Homology CDS 395960 397048 . + 0 ID=cds-WP_000439824.1;Parent=gene-CCO47_RS01775;Dbxref=GenBank:WP_000439824.1;Name=WP_000439824.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462389.1;locus_tag=CCO47_RS01775;product=3-dehydroquinate synthase;protein_id=WP_000439824.1;transl_table=11 NZ_CP075113.1 RefSeq gene 397146 398423 . + . ID=gene-CCO47_RS01780;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=CCO47_RS01780;old_locus_tag=CCO47_01780 NZ_CP075113.1 Protein Homology CDS 397146 398423 . + 0 ID=cds-WP_000343146.1;Parent=gene-CCO47_RS01780;Dbxref=GenBank:WP_000343146.1;Name=WP_000343146.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462388.1;locus_tag=CCO47_RS01780;product=cell division protein DamX;protein_id=WP_000343146.1;transl_table=11 NZ_CP075113.1 RefSeq gene 398604 399440 . + . ID=gene-CCO47_RS01785;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=CCO47_RS01785;old_locus_tag=CCO47_01785 NZ_CP075113.1 Protein Homology CDS 398604 399440 . + 0 ID=cds-WP_000742132.1;Parent=gene-CCO47_RS01785;Dbxref=GenBank:WP_000742132.1;Name=WP_000742132.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462387.1;locus_tag=CCO47_RS01785;product=adenine-specific DNA-methyltransferase;protein_id=WP_000742132.1;transl_table=11 NZ_CP075113.1 RefSeq gene 399458 400135 . + . ID=gene-CCO47_RS01790;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=CCO47_RS01790;old_locus_tag=CCO47_01790 NZ_CP075113.1 Protein Homology CDS 399458 400135 . + 0 ID=cds-WP_000816284.1;Parent=gene-CCO47_RS01790;Dbxref=GenBank:WP_000816284.1;Name=WP_000816284.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462386.1;locus_tag=CCO47_RS01790;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816284.1;transl_table=11 NZ_CP075113.1 RefSeq gene 400128 400886 . + . ID=gene-CCO47_RS01795;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=CCO47_RS01795;old_locus_tag=CCO47_01795 NZ_CP075113.1 Protein Homology CDS 400128 400886 . + 0 ID=cds-WP_000359649.1;Parent=gene-CCO47_RS01795;Dbxref=GenBank:WP_000359649.1;Name=WP_000359649.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462385.1;locus_tag=CCO47_RS01795;product=phosphoglycolate phosphatase;protein_id=WP_000359649.1;transl_table=11 NZ_CP075113.1 RefSeq gene 400879 401883 . + . ID=gene-CCO47_RS01800;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CCO47_RS01800;old_locus_tag=CCO47_01800 NZ_CP075113.1 Protein Homology CDS 400879 401883 . + 0 ID=cds-WP_000165562.1;Parent=gene-CCO47_RS01800;Dbxref=GenBank:WP_000165562.1;Name=WP_000165562.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462384.1;locus_tag=CCO47_RS01800;product=tryptophan--tRNA ligase;protein_id=WP_000165562.1;transl_table=11 NZ_CP075113.1 RefSeq gene 402028 402198 . - . ID=gene-CCO47_RS01805;Name=CCO47_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01805;old_locus_tag=CCO47_01805 NZ_CP075113.1 Protein Homology CDS 402028 402198 . - 0 ID=cds-WP_000472323.1;Parent=gene-CCO47_RS01805;Dbxref=GenBank:WP_000472323.1;Name=WP_000472323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462383.1;locus_tag=CCO47_RS01805;product=YhfL family protein;protein_id=WP_000472323.1;transl_table=11 NZ_CP075113.1 RefSeq gene 402391 408162 . - . ID=gene-CCO47_RS01810;Name=bigA;gbkey=Gene;gene=bigA;gene_biotype=protein_coding;locus_tag=CCO47_RS01810;old_locus_tag=CCO47_01810 NZ_CP075113.1 Protein Homology CDS 402391 408162 . - 0 ID=cds-WP_001169935.1;Parent=gene-CCO47_RS01810;Dbxref=GenBank:WP_001169935.1;Name=WP_001169935.1;gbkey=CDS;gene=bigA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001708169.1;locus_tag=CCO47_RS01810;product=autotransporter adhesin BigA;protein_id=WP_001169935.1;transl_table=11 NZ_CP075113.1 RefSeq gene 408500 409873 . - . ID=gene-CCO47_RS01815;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=CCO47_RS01815;old_locus_tag=CCO47_01815 NZ_CP075113.1 Protein Homology CDS 408500 409873 . - 0 ID=cds-WP_000349906.1;Parent=gene-CCO47_RS01815;Dbxref=GenBank:WP_000349906.1;Name=WP_000349906.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=CCO47_RS01815;product=siroheme synthase CysG;protein_id=WP_000349906.1;transl_table=11 NZ_CP075113.1 RefSeq gene 409885 410694 . - . ID=gene-CCO47_RS01820;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=CCO47_RS01820;old_locus_tag=CCO47_01820 NZ_CP075113.1 Protein Homology CDS 409885 410694 . - 0 ID=cds-WP_000493576.1;Parent=gene-CCO47_RS01820;Dbxref=GenBank:WP_000493576.1;Name=WP_000493576.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462379.1;locus_tag=CCO47_RS01820;product=nitrite transporter NirC;protein_id=WP_000493576.1;transl_table=11 NZ_CP075113.1 RefSeq gene 410890 411216 . - . ID=gene-CCO47_RS01825;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=CCO47_RS01825;old_locus_tag=CCO47_01825 NZ_CP075113.1 Protein Homology CDS 410890 411216 . - 0 ID=cds-WP_000084813.1;Parent=gene-CCO47_RS01825;Dbxref=GenBank:WP_000084813.1;Name=WP_000084813.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462378.1;locus_tag=CCO47_RS01825;product=nitrite reductase small subunit NirD;protein_id=WP_000084813.1;transl_table=11 NZ_CP075113.1 RefSeq gene 411213 413756 . - . ID=gene-CCO47_RS01830;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=CCO47_RS01830;old_locus_tag=CCO47_01830 NZ_CP075113.1 Protein Homology CDS 411213 413756 . - 0 ID=cds-WP_000049249.1;Parent=gene-CCO47_RS01830;Dbxref=GenBank:WP_000049249.1;Name=WP_000049249.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=CCO47_RS01830;product=NADPH-nitrite reductase large subunit;protein_id=WP_000049249.1;transl_table=11 NZ_CP075113.1 RefSeq gene 414019 415200 . - . ID=gene-CCO47_RS01835;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=CCO47_RS01835;old_locus_tag=CCO47_01835 NZ_CP075113.1 Protein Homology CDS 414019 415200 . - 0 ID=cds-WP_000185217.1;Parent=gene-CCO47_RS01835;Dbxref=GenBank:WP_000185217.1;Name=WP_000185217.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462376.1;locus_tag=CCO47_RS01835;product=MFS transporter TsgA;protein_id=WP_000185217.1;transl_table=11 NZ_CP075113.1 RefSeq gene 415477 416049 . + . ID=gene-CCO47_RS01840;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=CCO47_RS01840;old_locus_tag=CCO47_01840 NZ_CP075113.1 Protein Homology CDS 415477 416049 . + 0 ID=cds-WP_094912397.1;Parent=gene-CCO47_RS01840;Dbxref=GenBank:WP_094912397.1;Name=WP_094912397.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=CCO47_RS01840;product=peptidylprolyl isomerase A;protein_id=WP_094912397.1;transl_table=11 NZ_CP075113.1 RefSeq gene 416158 416325 . + . ID=gene-CCO47_RS01845;Name=CCO47_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01845;old_locus_tag=CCO47_01845 NZ_CP075113.1 Protein Homology CDS 416158 416325 . + 0 ID=cds-WP_001519136.1;Parent=gene-CCO47_RS01845;Dbxref=GenBank:WP_001519136.1;Name=WP_001519136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462374.1;locus_tag=CCO47_RS01845;product=YhfG family protein;protein_id=WP_001519136.1;transl_table=11 NZ_CP075113.1 RefSeq gene 416315 416917 . + . ID=gene-CCO47_RS01850;Name=CCO47_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01850;old_locus_tag=CCO47_01850 NZ_CP075113.1 Protein Homology CDS 416315 416917 . + 0 ID=cds-WP_001280665.1;Parent=gene-CCO47_RS01850;Dbxref=GenBank:WP_001280665.1;Name=WP_001280665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=CCO47_RS01850;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_001280665.1;transl_table=11 NZ_CP075113.1 RefSeq gene 416949 417512 . + . ID=gene-CCO47_RS01855;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=CCO47_RS01855;old_locus_tag=CCO47_01855 NZ_CP075113.1 Protein Homology CDS 416949 417512 . + 0 ID=cds-WP_000601880.1;Parent=gene-CCO47_RS01855;Dbxref=GenBank:WP_000601880.1;Name=WP_000601880.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462372.1;locus_tag=CCO47_RS01855;product=aminodeoxychorismate synthase component 2;protein_id=WP_000601880.1;transl_table=11 NZ_CP075113.1 RefSeq gene 417598 418815 . + . ID=gene-CCO47_RS01860;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=CCO47_RS01860;old_locus_tag=CCO47_01860 NZ_CP075113.1 Protein Homology CDS 417598 418815 . + 0 ID=cds-WP_000190022.1;Parent=gene-CCO47_RS01860;Dbxref=GenBank:WP_000190022.1;Name=WP_000190022.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=CCO47_RS01860;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_000190022.1;transl_table=11 NZ_CP075113.1 RefSeq gene 418858 420945 . - . ID=gene-CCO47_RS01865;Name=CCO47_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01865;old_locus_tag=CCO47_01865 NZ_CP075113.1 Protein Homology CDS 418858 420945 . - 0 ID=cds-WP_000269313.1;Parent=gene-CCO47_RS01865;Dbxref=GenBank:WP_000269313.1;Name=WP_000269313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312236.3;locus_tag=CCO47_RS01865;product=YccS/YhfK family putative transporter;protein_id=WP_000269313.1;transl_table=11 NZ_CP075113.1 RefSeq gene 420994 421626 . - . ID=gene-CCO47_RS01870;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=CCO47_RS01870;old_locus_tag=CCO47_01870 NZ_CP075113.1 Protein Homology CDS 420994 421626 . - 0 ID=cds-WP_000242758.1;Parent=gene-CCO47_RS01870;Dbxref=GenBank:WP_000242758.1;Name=WP_000242758.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=CCO47_RS01870;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242758.1;transl_table=11 NZ_CP075113.1 RefSeq gene 421934 422338 . + . ID=gene-CCO47_RS01875;Name=CCO47_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01875;old_locus_tag=CCO47_01875 NZ_CP075113.1 Protein Homology CDS 421934 422338 . + 0 ID=cds-WP_001148919.1;Parent=gene-CCO47_RS01875;Dbxref=GenBank:WP_001148919.1;Name=WP_001148919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462368.1;locus_tag=CCO47_RS01875;product=OsmC family protein;protein_id=WP_001148919.1;transl_table=11 NZ_CP075113.1 RefSeq gene 422434 423303 . - . ID=gene-CCO47_RS01880;Name=CCO47_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01880;old_locus_tag=CCO47_01880 NZ_CP075113.1 Protein Homology CDS 422434 423303 . - 0 ID=cds-WP_001274690.1;Parent=gene-CCO47_RS01880;Dbxref=GenBank:WP_001274690.1;Name=WP_001274690.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462367.1;locus_tag=CCO47_RS01880;product=phosphoribulokinase;protein_id=WP_001274690.1;transl_table=11 NZ_CP075113.1 RefSeq gene 423354 423572 . - . ID=gene-CCO47_RS01885;Name=CCO47_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01885;old_locus_tag=CCO47_01885 NZ_CP075113.1 Protein Homology CDS 423354 423572 . - 0 ID=cds-WP_000586567.1;Parent=gene-CCO47_RS01885;Dbxref=GenBank:WP_000586567.1;Name=WP_000586567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=CCO47_RS01885;product=YheU family protein;protein_id=WP_000586567.1;transl_table=11 NZ_CP075113.1 RefSeq gene 423569 424636 . - . ID=gene-CCO47_RS01890;Name=CCO47_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01890;old_locus_tag=CCO47_01890 NZ_CP075113.1 Protein Homology CDS 423569 424636 . - 0 ID=cds-WP_001214115.1;Parent=gene-CCO47_RS01890;Dbxref=GenBank:WP_001214115.1;Name=WP_001214115.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=CCO47_RS01890;product=hydrolase;protein_id=WP_001214115.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 424834 425145 . + . ID=gene-CCO47_RS01895;Name=CCO47_RS01895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS01895;old_locus_tag=CCO47_01895;pseudo=true NZ_CP075113.1 Protein Homology CDS 424834 425145 . + 0 ID=cds-CCO47_RS01895;Parent=gene-CCO47_RS01895;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462364.1;locus_tag=CCO47_RS01895;product=monooxygenase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 425147 425368 . - . ID=gene-CCO47_RS01900;Name=CCO47_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01900;old_locus_tag=CCO47_01900 NZ_CP075113.1 Protein Homology CDS 425147 425368 . - 0 ID=cds-WP_001054040.1;Parent=gene-CCO47_RS01900;Dbxref=GenBank:WP_001054040.1;Name=WP_001054040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=CCO47_RS01900;product=hypothetical protein;protein_id=WP_001054040.1;transl_table=11 NZ_CP075113.1 RefSeq gene 425531 427438 . - . ID=gene-CCO47_RS01905;Name=CCO47_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01905;old_locus_tag=CCO47_01905 NZ_CP075113.1 Protein Homology CDS 425531 427438 . - 0 ID=cds-WP_000634748.1;Parent=gene-CCO47_RS01905;Dbxref=GenBank:WP_000634748.1;Name=WP_000634748.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462363.1;locus_tag=CCO47_RS01905;product=ABC transporter ATP-binding protein;protein_id=WP_000634748.1;transl_table=11 NZ_CP075113.1 RefSeq gene 427704 428255 . + . ID=gene-CCO47_RS01910;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=CCO47_RS01910;old_locus_tag=CCO47_01910 NZ_CP075113.1 Protein Homology CDS 427704 428255 . + 0 ID=cds-WP_000081820.1;Parent=gene-CCO47_RS01910;Dbxref=GenBank:WP_000081820.1;Name=WP_000081820.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462362.1;locus_tag=CCO47_RS01910;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_000081820.1;transl_table=11 NZ_CP075113.1 RefSeq gene 428255 430060 . + . ID=gene-CCO47_RS01915;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=CCO47_RS01915;old_locus_tag=CCO47_01915 NZ_CP075113.1 Protein Homology CDS 428255 430060 . + 0 ID=cds-WP_000398136.1;Parent=gene-CCO47_RS01915;Dbxref=GenBank:WP_000398136.1;Name=WP_000398136.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=CCO47_RS01915;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_000398136.1;transl_table=11 NZ_CP075113.1 RefSeq gene 430070 430270 . + . ID=gene-CCO47_RS01920;Name=CCO47_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01920;old_locus_tag=CCO47_01920 NZ_CP075113.1 Protein Homology CDS 430070 430270 . + 0 ID=cds-WP_001007735.1;Parent=gene-CCO47_RS01920;Dbxref=GenBank:WP_001007735.1;Name=WP_001007735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462360.1;locus_tag=CCO47_RS01920;product=YheV family putative zinc ribbon protein;protein_id=WP_001007735.1;transl_table=11 NZ_CP075113.1 RefSeq gene 430365 430955 . + . ID=gene-CCO47_RS01925;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=CCO47_RS01925;old_locus_tag=CCO47_01925 NZ_CP075113.1 Protein Homology CDS 430365 430955 . + 0 ID=cds-WP_000861341.1;Parent=gene-CCO47_RS01925;Dbxref=GenBank:WP_000861341.1;Name=WP_000861341.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462359.1;locus_tag=CCO47_RS01925;product=peptidylprolyl isomerase;protein_id=WP_000861341.1;transl_table=11 NZ_CP075113.1 RefSeq gene 431144 431362 . - . ID=gene-CCO47_RS01930;Name=CCO47_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01930;old_locus_tag=CCO47_01930 NZ_CP075113.1 Protein Homology CDS 431144 431362 . - 0 ID=cds-WP_001152701.1;Parent=gene-CCO47_RS01930;Dbxref=GenBank:WP_001152701.1;Name=WP_001152701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=CCO47_RS01930;product=protein SlyX;protein_id=WP_001152701.1;transl_table=11 NZ_CP075113.1 RefSeq gene 431582 432400 . + . ID=gene-CCO47_RS01935;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=CCO47_RS01935;old_locus_tag=CCO47_01935 NZ_CP075113.1 Protein Homology CDS 431582 432400 . + 0 ID=cds-WP_000838225.1;Parent=gene-CCO47_RS01935;Dbxref=GenBank:WP_000838225.1;Name=WP_000838225.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=CCO47_RS01935;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838225.1;transl_table=11 NZ_CP075113.1 RefSeq gene 432676 433398 . + . ID=gene-CCO47_RS01940;Name=CCO47_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS01940;old_locus_tag=CCO47_01940 NZ_CP075113.1 Protein Homology CDS 432676 433398 . + 0 ID=cds-WP_000091471.1;Parent=gene-CCO47_RS01940;Dbxref=GenBank:WP_000091471.1;Name=WP_000091471.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462356.1;locus_tag=CCO47_RS01940;product=helix-turn-helix transcriptional regulator;protein_id=WP_000091471.1;transl_table=11 NZ_CP075113.1 RefSeq gene 433398 433784 . + . ID=gene-CCO47_RS01945;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=CCO47_RS01945;old_locus_tag=CCO47_01945 NZ_CP075113.1 Protein Homology CDS 433398 433784 . + 0 ID=cds-WP_001268011.1;Parent=gene-CCO47_RS01945;Dbxref=GenBank:WP_001268011.1;Name=WP_001268011.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462355.1;locus_tag=CCO47_RS01945;product=sulfurtransferase complex subunit TusD;protein_id=WP_001268011.1;transl_table=11 NZ_CP075113.1 RefSeq gene 433784 434140 . + . ID=gene-CCO47_RS01950;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=CCO47_RS01950;old_locus_tag=CCO47_01950 NZ_CP075113.1 Protein Homology CDS 433784 434140 . + 0 ID=cds-WP_000820705.1;Parent=gene-CCO47_RS01950;Dbxref=GenBank:WP_000820705.1;Name=WP_000820705.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462354.1;locus_tag=CCO47_RS01950;product=sulfurtransferase complex subunit TusC;protein_id=WP_000820705.1;transl_table=11 NZ_CP075113.1 RefSeq gene 434148 434435 . + . ID=gene-CCO47_RS01955;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=CCO47_RS01955;old_locus_tag=CCO47_01955 NZ_CP075113.1 Protein Homology CDS 434148 434435 . + 0 ID=cds-WP_094912399.1;Parent=gene-CCO47_RS01955;Dbxref=GenBank:WP_094912399.1;Name=WP_094912399.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462353.1;locus_tag=CCO47_RS01955;product=sulfurtransferase complex subunit TusB;protein_id=WP_094912399.1;transl_table=11 NZ_CP075113.1 RefSeq gene 434561 434935 . + . ID=gene-CCO47_RS01960;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=CCO47_RS01960;old_locus_tag=CCO47_01960 NZ_CP075113.1 Protein Homology CDS 434561 434935 . + 0 ID=cds-WP_000246815.1;Parent=gene-CCO47_RS01960;Dbxref=GenBank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=CCO47_RS01960;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11 NZ_CP075113.1 RefSeq gene 435031 435501 . + . ID=gene-CCO47_RS01965;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=CCO47_RS01965;old_locus_tag=CCO47_01965 NZ_CP075113.1 Protein Homology CDS 435031 435501 . + 0 ID=cds-WP_001138043.1;Parent=gene-CCO47_RS01965;Dbxref=GenBank:WP_001138043.1;Name=WP_001138043.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=CCO47_RS01965;product=30S ribosomal protein S7;protein_id=WP_001138043.1;transl_table=11 NZ_CP075113.1 RefSeq gene 435598 437712 . + . ID=gene-CCO47_RS01970;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=CCO47_RS01970;old_locus_tag=CCO47_01970 NZ_CP075113.1 Protein Homology CDS 435598 437712 . + 0 ID=cds-WP_000124693.1;Parent=gene-CCO47_RS01970;Dbxref=GenBank:WP_000124693.1;Name=WP_000124693.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=CCO47_RS01970;product=elongation factor G;protein_id=WP_000124693.1;transl_table=11 NZ_CP075113.1 RefSeq gene 437784 438968 . + . ID=gene-CCO47_RS01975;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=CCO47_RS01975;old_locus_tag=CCO47_01975 NZ_CP075113.1 Protein Homology CDS 437784 438968 . + 0 ID=cds-WP_000031748.1;Parent=gene-CCO47_RS01975;Dbxref=GenBank:WP_000031748.1;Name=WP_000031748.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=CCO47_RS01975;product=elongation factor Tu;protein_id=WP_000031748.1;transl_table=11 NZ_CP075113.1 RefSeq gene 439153 439347 . + . ID=gene-CCO47_RS01980;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=CCO47_RS01980;old_locus_tag=CCO47_01980 NZ_CP075113.1 Protein Homology CDS 439153 439347 . + 0 ID=cds-WP_000289082.1;Parent=gene-CCO47_RS01980;Dbxref=GenBank:WP_000289082.1;Name=WP_000289082.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462348.1;locus_tag=CCO47_RS01980;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289082.1;transl_table=11 NZ_CP075113.1 RefSeq gene 439420 439896 . + . ID=gene-CCO47_RS01985;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=CCO47_RS01985;old_locus_tag=CCO47_01985 NZ_CP075113.1 Protein Homology CDS 439420 439896 . + 0 ID=cds-WP_000675530.1;Parent=gene-CCO47_RS01985;Dbxref=GenBank:WP_000675530.1;Name=WP_000675530.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462347.1;locus_tag=CCO47_RS01985;product=bacterioferritin;protein_id=WP_000675530.1;transl_table=11 NZ_CP075113.1 RefSeq gene 439893 440360 . - . ID=gene-CCO47_RS01990;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=CCO47_RS01990;old_locus_tag=CCO47_01990 NZ_CP075113.1 Protein Homology CDS 439893 440360 . - 0 ID=cds-WP_000495849.1;Parent=gene-CCO47_RS01990;Dbxref=GenBank:WP_000495849.1;Name=WP_000495849.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462346.1;locus_tag=CCO47_RS01990;product=prepilin peptidase;protein_id=WP_000495849.1;transl_table=11 NZ_CP075113.1 RefSeq gene 440740 441051 . + . ID=gene-CCO47_RS01995;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=CCO47_RS01995;old_locus_tag=CCO47_01995 NZ_CP075113.1 Protein Homology CDS 440740 441051 . + 0 ID=cds-WP_001181005.1;Parent=gene-CCO47_RS01995;Dbxref=GenBank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=CCO47_RS01995;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NZ_CP075113.1 RefSeq gene 441084 441713 . + . ID=gene-CCO47_RS02000;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=CCO47_RS02000;old_locus_tag=CCO47_02000 NZ_CP075113.1 Protein Homology CDS 441084 441713 . + 0 ID=cds-WP_000579838.1;Parent=gene-CCO47_RS02000;Dbxref=GenBank:WP_000579838.1;Name=WP_000579838.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=CCO47_RS02000;product=50S ribosomal protein L3;protein_id=WP_000579838.1;transl_table=11 NZ_CP075113.1 RefSeq gene 441724 442329 . + . ID=gene-CCO47_RS02005;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=CCO47_RS02005;old_locus_tag=CCO47_02005 NZ_CP075113.1 Protein Homology CDS 441724 442329 . + 0 ID=cds-WP_000424395.1;Parent=gene-CCO47_RS02005;Dbxref=GenBank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=CCO47_RS02005;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11 NZ_CP075113.1 RefSeq gene 442326 442628 . + . ID=gene-CCO47_RS02010;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=CCO47_RS02010;old_locus_tag=CCO47_02010 NZ_CP075113.1 Protein Homology CDS 442326 442628 . + 0 ID=cds-WP_000617546.1;Parent=gene-CCO47_RS02010;Dbxref=GenBank:WP_000617546.1;Name=WP_000617546.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=CCO47_RS02010;product=50S ribosomal protein L23;protein_id=WP_000617546.1;transl_table=11 NZ_CP075113.1 RefSeq gene 442646 443467 . + . ID=gene-CCO47_RS02015;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=CCO47_RS02015;old_locus_tag=CCO47_02015 NZ_CP075113.1 Protein Homology CDS 442646 443467 . + 0 ID=cds-WP_000301869.1;Parent=gene-CCO47_RS02015;Dbxref=GenBank:WP_000301869.1;Name=WP_000301869.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=CCO47_RS02015;product=50S ribosomal protein L2;protein_id=WP_000301869.1;transl_table=11 NZ_CP075113.1 RefSeq gene 443484 443762 . + . ID=gene-CCO47_RS02020;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=CCO47_RS02020;old_locus_tag=CCO47_02020 NZ_CP075113.1 Protein Homology CDS 443484 443762 . + 0 ID=cds-WP_001138115.1;Parent=gene-CCO47_RS02020;Dbxref=GenBank:WP_001138115.1;Name=WP_001138115.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=CCO47_RS02020;product=30S ribosomal protein S19;protein_id=WP_001138115.1;transl_table=11 NZ_CP075113.1 RefSeq gene 443777 444109 . + . ID=gene-CCO47_RS02025;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=CCO47_RS02025;old_locus_tag=CCO47_02025 NZ_CP075113.1 Protein Homology CDS 443777 444109 . + 0 ID=cds-WP_000447529.1;Parent=gene-CCO47_RS02025;Dbxref=GenBank:WP_000447529.1;Name=WP_000447529.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=CCO47_RS02025;product=50S ribosomal protein L22;protein_id=WP_000447529.1;transl_table=11 NZ_CP075113.1 RefSeq gene 444127 444828 . + . ID=gene-CCO47_RS02030;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=CCO47_RS02030;old_locus_tag=CCO47_02030 NZ_CP075113.1 Protein Homology CDS 444127 444828 . + 0 ID=cds-WP_000529945.1;Parent=gene-CCO47_RS02030;Dbxref=GenBank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=CCO47_RS02030;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11 NZ_CP075113.1 RefSeq gene 444841 445251 . + . ID=gene-CCO47_RS02035;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=CCO47_RS02035;old_locus_tag=CCO47_02035 NZ_CP075113.1 Protein Homology CDS 444841 445251 . + 0 ID=cds-WP_000941208.1;Parent=gene-CCO47_RS02035;Dbxref=GenBank:WP_000941208.1;Name=WP_000941208.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=CCO47_RS02035;product=50S ribosomal protein L16;protein_id=WP_000941208.1;transl_table=11 NZ_CP075113.1 RefSeq gene 445251 445442 . + . ID=gene-CCO47_RS02040;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=CCO47_RS02040;old_locus_tag=CCO47_02040 NZ_CP075113.1 Protein Homology CDS 445251 445442 . + 0 ID=cds-WP_000644742.1;Parent=gene-CCO47_RS02040;Dbxref=GenBank:WP_000644742.1;Name=WP_000644742.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=CCO47_RS02040;product=50S ribosomal protein L29;protein_id=WP_000644742.1;transl_table=11 NZ_CP075113.1 RefSeq gene 445442 445696 . + . ID=gene-CCO47_RS02045;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=CCO47_RS02045;old_locus_tag=CCO47_02045 NZ_CP075113.1 Protein Homology CDS 445442 445696 . + 0 ID=cds-WP_000130101.1;Parent=gene-CCO47_RS02045;Dbxref=GenBank:WP_000130101.1;Name=WP_000130101.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=CCO47_RS02045;product=30S ribosomal protein S17;protein_id=WP_000130101.1;transl_table=11 NZ_CP075113.1 RefSeq gene 445860 446231 . + . ID=gene-CCO47_RS02050;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=CCO47_RS02050;old_locus_tag=CCO47_02050 NZ_CP075113.1 Protein Homology CDS 445860 446231 . + 0 ID=cds-WP_000613954.1;Parent=gene-CCO47_RS02050;Dbxref=GenBank:WP_000613954.1;Name=WP_000613954.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=CCO47_RS02050;product=50S ribosomal protein L14;protein_id=WP_000613954.1;transl_table=11 NZ_CP075113.1 RefSeq gene 446242 446556 . + . ID=gene-CCO47_RS02055;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=CCO47_RS02055;old_locus_tag=CCO47_02055 NZ_CP075113.1 Protein Homology CDS 446242 446556 . + 0 ID=cds-WP_000729185.1;Parent=gene-CCO47_RS02055;Dbxref=GenBank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=CCO47_RS02055;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11 NZ_CP075113.1 RefSeq gene 446571 447110 . + . ID=gene-CCO47_RS02060;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=CCO47_RS02060;old_locus_tag=CCO47_02060 NZ_CP075113.1 Protein Homology CDS 446571 447110 . + 0 ID=cds-WP_001096206.1;Parent=gene-CCO47_RS02060;Dbxref=GenBank:WP_001096206.1;Name=WP_001096206.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=CCO47_RS02060;product=50S ribosomal protein L5;protein_id=WP_001096206.1;transl_table=11 NZ_CP075113.1 RefSeq gene 447125 447430 . + . ID=gene-CCO47_RS02065;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=CCO47_RS02065;old_locus_tag=CCO47_02065 NZ_CP075113.1 Protein Homology CDS 447125 447430 . + 0 ID=cds-WP_001118932.1;Parent=gene-CCO47_RS02065;Dbxref=GenBank:WP_001118932.1;Name=WP_001118932.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=CCO47_RS02065;product=30S ribosomal protein S14;protein_id=WP_001118932.1;transl_table=11 NZ_CP075113.1 RefSeq gene 447464 447856 . + . ID=gene-CCO47_RS02070;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=CCO47_RS02070;old_locus_tag=CCO47_02070 NZ_CP075113.1 Protein Homology CDS 447464 447856 . + 0 ID=cds-WP_000062611.1;Parent=gene-CCO47_RS02070;Dbxref=GenBank:WP_000062611.1;Name=WP_000062611.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=CCO47_RS02070;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11 NZ_CP075113.1 RefSeq gene 447869 448402 . + . ID=gene-CCO47_RS02075;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=CCO47_RS02075;old_locus_tag=CCO47_02075 NZ_CP075113.1 Protein Homology CDS 447869 448402 . + 0 ID=cds-WP_000091938.1;Parent=gene-CCO47_RS02075;Dbxref=GenBank:WP_000091938.1;Name=WP_000091938.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=CCO47_RS02075;product=50S ribosomal protein L6;protein_id=WP_000091938.1;transl_table=11 NZ_CP075113.1 RefSeq gene 448412 448765 . + . ID=gene-CCO47_RS02080;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=CCO47_RS02080;old_locus_tag=CCO47_02080 NZ_CP075113.1 Protein Homology CDS 448412 448765 . + 0 ID=cds-WP_000358956.1;Parent=gene-CCO47_RS02080;Dbxref=GenBank:WP_000358956.1;Name=WP_000358956.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=CCO47_RS02080;product=50S ribosomal protein L18;protein_id=WP_000358956.1;transl_table=11 NZ_CP075113.1 RefSeq gene 448780 449283 . + . ID=gene-CCO47_RS02085;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=CCO47_RS02085;old_locus_tag=CCO47_02085 NZ_CP075113.1 Protein Homology CDS 448780 449283 . + 0 ID=cds-WP_000940121.1;Parent=gene-CCO47_RS02085;Dbxref=GenBank:WP_000940121.1;Name=WP_000940121.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=CCO47_RS02085;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11 NZ_CP075113.1 RefSeq gene 449287 449466 . + . ID=gene-CCO47_RS02090;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=CCO47_RS02090;old_locus_tag=CCO47_02090 NZ_CP075113.1 Protein Homology CDS 449287 449466 . + 0 ID=cds-WP_001140434.1;Parent=gene-CCO47_RS02090;Dbxref=GenBank:WP_001140434.1;Name=WP_001140434.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=CCO47_RS02090;product=50S ribosomal protein L30;protein_id=WP_001140434.1;transl_table=11 NZ_CP075113.1 RefSeq gene 449470 449904 . + . ID=gene-CCO47_RS02095;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=CCO47_RS02095;old_locus_tag=CCO47_02095 NZ_CP075113.1 Protein Homology CDS 449470 449904 . + 0 ID=cds-WP_001238917.1;Parent=gene-CCO47_RS02095;Dbxref=GenBank:WP_001238917.1;Name=WP_001238917.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=CCO47_RS02095;product=50S ribosomal protein L15;protein_id=WP_001238917.1;transl_table=11 NZ_CP075113.1 RefSeq gene 449912 451243 . + . ID=gene-CCO47_RS02100;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=CCO47_RS02100;old_locus_tag=CCO47_02100 NZ_CP075113.1 Protein Homology CDS 449912 451243 . + 0 ID=cds-WP_001118864.1;Parent=gene-CCO47_RS02100;Dbxref=GenBank:WP_001118864.1;Name=WP_001118864.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=CCO47_RS02100;product=preprotein translocase subunit SecY;protein_id=WP_001118864.1;transl_table=11 NZ_CP075113.1 RefSeq gene 451275 451391 . + . ID=gene-CCO47_RS02105;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=CCO47_RS02105;old_locus_tag=CCO47_02105 NZ_CP075113.1 Protein Homology CDS 451275 451391 . + 0 ID=cds-WP_000868187.1;Parent=gene-CCO47_RS02105;Dbxref=GenBank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=CCO47_RS02105;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11 NZ_CP075113.1 RefSeq gene 451538 451894 . + . ID=gene-CCO47_RS02110;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=CCO47_RS02110;old_locus_tag=CCO47_02110 NZ_CP075113.1 Protein Homology CDS 451538 451894 . + 0 ID=cds-WP_000090780.1;Parent=gene-CCO47_RS02110;Dbxref=GenBank:WP_000090780.1;Name=WP_000090780.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=CCO47_RS02110;product=30S ribosomal protein S13;protein_id=WP_000090780.1;transl_table=11 NZ_CP075113.1 RefSeq gene 451911 452300 . + . ID=gene-CCO47_RS02115;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=CCO47_RS02115;old_locus_tag=CCO47_02115 NZ_CP075113.1 Protein Homology CDS 451911 452300 . + 0 ID=cds-WP_001029758.1;Parent=gene-CCO47_RS02115;Dbxref=GenBank:WP_001029758.1;Name=WP_001029758.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=CCO47_RS02115;product=30S ribosomal protein S11;protein_id=WP_001029758.1;transl_table=11 NZ_CP075113.1 RefSeq gene 452334 452954 . + . ID=gene-CCO47_RS02120;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=CCO47_RS02120;old_locus_tag=CCO47_02120 NZ_CP075113.1 Protein Homology CDS 452334 452954 . + 0 ID=cds-WP_000135226.1;Parent=gene-CCO47_RS02120;Dbxref=GenBank:WP_000135226.1;Name=WP_000135226.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=CCO47_RS02120;product=30S ribosomal protein S4;protein_id=WP_000135226.1;transl_table=11 NZ_CP075113.1 RefSeq gene 452980 453969 . + . ID=gene-CCO47_RS02125;Name=CCO47_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02125;old_locus_tag=CCO47_02125 NZ_CP075113.1 Protein Homology CDS 452980 453969 . + 0 ID=cds-WP_001162094.1;Parent=gene-CCO47_RS02125;Dbxref=GenBank:WP_001162094.1;Name=WP_001162094.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=CCO47_RS02125;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11 NZ_CP075113.1 RefSeq gene 454010 454393 . + . ID=gene-CCO47_RS02130;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=CCO47_RS02130;old_locus_tag=CCO47_02130 NZ_CP075113.1 Protein Homology CDS 454010 454393 . + 0 ID=cds-WP_001216370.1;Parent=gene-CCO47_RS02130;Dbxref=GenBank:WP_001216370.1;Name=WP_001216370.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462318.1;locus_tag=CCO47_RS02130;product=50S ribosomal protein L17;protein_id=WP_001216370.1;transl_table=11 NZ_CP075113.1 RefSeq gene 454501 454869 . + . ID=gene-CCO47_RS02135;Name=CCO47_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02135;old_locus_tag=CCO47_02135 NZ_CP075113.1 Protein Homology CDS 454501 454869 . + 0 ID=cds-WP_000266515.1;Parent=gene-CCO47_RS02135;Dbxref=GenBank:WP_000266515.1;Name=WP_000266515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462317.1;locus_tag=CCO47_RS02135;product=DnaJ family domain-containing protein;protein_id=WP_000266515.1;transl_table=11 NZ_CP075113.1 RefSeq gene 454880 455305 . + . ID=gene-CCO47_RS02140;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=CCO47_RS02140;old_locus_tag=CCO47_02140 NZ_CP075113.1 Protein Homology CDS 454880 455305 . + 0 ID=cds-WP_000285585.1;Parent=gene-CCO47_RS02140;Dbxref=GenBank:WP_000285585.1;Name=WP_000285585.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=CCO47_RS02140;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_000285585.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 455363 455566 . + . ID=gene-CCO47_RS02145;Name=CCO47_RS02145;end_range=455566,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS02145;old_locus_tag=CCO47_02145;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 455363 455566 . + 0 ID=cds-CCO47_RS02145;Parent=gene-CCO47_RS02145;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=455566,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=CCO47_RS02145;partial=true;product=alternative ribosome-rescue factor A;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 455568 455981 . - . ID=gene-CCO47_RS02150;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=CCO47_RS02150;old_locus_tag=CCO47_02150 NZ_CP075113.1 Protein Homology CDS 455568 455981 . - 0 ID=cds-WP_000008119.1;Parent=gene-CCO47_RS02150;Dbxref=GenBank:WP_000008119.1;Name=WP_000008119.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462314.1;locus_tag=CCO47_RS02150;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000008119.1;transl_table=11 NZ_CP075113.1 RefSeq gene 456123 457499 . - . ID=gene-CCO47_RS02155;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=CCO47_RS02155;old_locus_tag=CCO47_02155 NZ_CP075113.1 Protein Homology CDS 456123 457499 . - 0 ID=cds-WP_000691374.1;Parent=gene-CCO47_RS02155;Dbxref=GenBank:WP_000691374.1;Name=WP_000691374.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=CCO47_RS02155;product=Trk system potassium transporter TrkA;protein_id=WP_000691374.1;transl_table=11 NZ_CP075113.1 RefSeq gene 457521 458810 . - . ID=gene-CCO47_RS02160;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=CCO47_RS02160;old_locus_tag=CCO47_02160 NZ_CP075113.1 Protein Homology CDS 457521 458810 . - 0 ID=cds-WP_000744615.1;Parent=gene-CCO47_RS02160;Dbxref=GenBank:WP_000744615.1;Name=WP_000744615.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462312.1;locus_tag=CCO47_RS02160;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_000744615.1;transl_table=11 NZ_CP075113.1 RefSeq gene 458862 459809 . - . ID=gene-CCO47_RS02165;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=CCO47_RS02165;old_locus_tag=CCO47_02165 NZ_CP075113.1 Protein Homology CDS 458862 459809 . - 0 ID=cds-WP_001285171.1;Parent=gene-CCO47_RS02165;Dbxref=GenBank:WP_001285171.1;Name=WP_001285171.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462311.1;locus_tag=CCO47_RS02165;product=methionyl-tRNA formyltransferase;protein_id=WP_001285171.1;transl_table=11 NZ_CP075113.1 RefSeq gene 459825 460334 . - . ID=gene-CCO47_RS02170;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=CCO47_RS02170;old_locus_tag=CCO47_02170 NZ_CP075113.1 Protein Homology CDS 459825 460334 . - 0 ID=cds-WP_000114987.1;Parent=gene-CCO47_RS02170;Dbxref=GenBank:WP_000114987.1;Name=WP_000114987.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=CCO47_RS02170;product=peptide deformylase;protein_id=WP_000114987.1;transl_table=11 NZ_CP075113.1 RefSeq gene 460466 461590 . + . ID=gene-CCO47_RS02175;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=CCO47_RS02175;old_locus_tag=CCO47_02175 NZ_CP075113.1 Protein Homology CDS 460466 461590 . + 0 ID=cds-WP_000124536.1;Parent=gene-CCO47_RS02175;Dbxref=GenBank:WP_000124536.1;Name=WP_000124536.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=CCO47_RS02175;product=DNA-protecting protein DprA;protein_id=WP_000124536.1;transl_table=11 NZ_CP075113.1 RefSeq gene 461562 462035 . + . ID=gene-CCO47_RS02180;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=CCO47_RS02180;old_locus_tag=CCO47_02180 NZ_CP075113.1 Protein Homology CDS 461562 462035 . + 0 ID=cds-WP_000460663.1;Parent=gene-CCO47_RS02180;Dbxref=GenBank:WP_000460663.1;Name=WP_000460663.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=CCO47_RS02180;product=DUF494 family protein Smg;protein_id=WP_000460663.1;transl_table=11 NZ_CP075113.1 RefSeq gene 462062 462604 . + . ID=gene-CCO47_RS02185;Name=CCO47_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02185;old_locus_tag=CCO47_02185 NZ_CP075113.1 Protein Homology CDS 462062 462604 . + 0 ID=cds-WP_001129708.1;Parent=gene-CCO47_RS02185;Dbxref=GenBank:WP_001129708.1;Name=WP_001129708.1;Ontology_term=GO:0006265,GO:0003677,GO:0003917;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462307.1;locus_tag=CCO47_RS02185;product=DNA topoisomerase family protein;protein_id=WP_001129708.1;transl_table=11 NZ_CP075113.1 RefSeq gene 462609 463181 . + . ID=gene-CCO47_RS02190;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=CCO47_RS02190;old_locus_tag=CCO47_02190 NZ_CP075113.1 Protein Homology CDS 462609 463181 . + 0 ID=cds-WP_001063613.1;Parent=gene-CCO47_RS02190;Dbxref=GenBank:WP_001063613.1;Name=WP_001063613.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462306.1;locus_tag=CCO47_RS02190;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_001063613.1;transl_table=11 NZ_CP075113.1 RefSeq gene 463186 464004 . + . ID=gene-CCO47_RS02195;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=CCO47_RS02195;old_locus_tag=CCO47_02195 NZ_CP075113.1 Protein Homology CDS 463186 464004 . + 0 ID=cds-WP_000451200.1;Parent=gene-CCO47_RS02195;Dbxref=GenBank:WP_000451200.1;Name=WP_000451200.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462305.1;locus_tag=CCO47_RS02195;product=shikimate dehydrogenase;protein_id=WP_000451200.1;transl_table=11 NZ_CP075113.1 RefSeq gene 464001 464258 . + . ID=gene-CCO47_RS02200;Name=CCO47_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02200;old_locus_tag=CCO47_02200 NZ_CP075113.1 Protein Homology CDS 464001 464258 . + 0 ID=cds-WP_001070575.1;Parent=gene-CCO47_RS02200;Dbxref=GenBank:WP_001070575.1;Name=WP_001070575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462304.1;locus_tag=CCO47_RS02200;product=DUF1488 family protein;protein_id=WP_001070575.1;transl_table=11 NZ_CP075113.1 RefSeq gene 464234 464788 . - . ID=gene-CCO47_RS02205;Name=CCO47_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02205;old_locus_tag=CCO47_02205 NZ_CP075113.1 Protein Homology CDS 464234 464788 . - 0 ID=cds-WP_001285635.1;Parent=gene-CCO47_RS02205;Dbxref=GenBank:WP_001285635.1;Name=WP_001285635.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462303.1;locus_tag=CCO47_RS02205;product=gamma carbonic anhydrase family protein;protein_id=WP_001285635.1;transl_table=11 NZ_CP075113.1 RefSeq gene 464902 465054 . + . ID=gene-CCO47_RS02210;Name=CCO47_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02210;old_locus_tag=CCO47_02210 NZ_CP075113.1 GeneMarkS-2+ CDS 464902 465054 . + 0 ID=cds-WP_000795911.1;Parent=gene-CCO47_RS02210;Dbxref=GenBank:WP_000795911.1;Name=WP_000795911.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO47_RS02210;product=hypothetical protein;protein_id=WP_000795911.1;transl_table=11 NZ_CP075113.1 RefSeq gene 465261 466802 . + . ID=gene-CCO47_RS02215;Name=CCO47_RS02215;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO47_RS02215;old_locus_tag=CCO47_02215 NZ_CP075113.1 cmsearch rRNA 465261 466802 . + . ID=rna-CCO47_RS02215;Parent=gene-CCO47_RS02215;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS02215;product=16S ribosomal RNA NZ_CP075113.1 cmsearch exon 465261 466802 . + . ID=exon-CCO47_RS02215-1;Parent=rna-CCO47_RS02215;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS02215;product=16S ribosomal RNA NZ_CP075113.1 RefSeq gene 466888 466963 . + . ID=gene-CCO47_RS02220;Name=CCO47_RS02220;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS02220;old_locus_tag=CCO47_02220 NZ_CP075113.1 tRNAscan-SE tRNA 466888 466963 . + . ID=rna-CCO47_RS02220;Parent=gene-CCO47_RS02220;anticodon=(pos:466922..466924);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS02220;product=tRNA-Glu NZ_CP075113.1 tRNAscan-SE exon 466888 466963 . + . ID=exon-CCO47_RS02220-1;Parent=rna-CCO47_RS02220;anticodon=(pos:466922..466924);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS02220;product=tRNA-Glu NZ_CP075113.1 RefSeq gene 467157 470064 . + . ID=gene-CCO47_RS02225;Name=CCO47_RS02225;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO47_RS02225;old_locus_tag=CCO47_02225 NZ_CP075113.1 cmsearch rRNA 467157 470064 . + . ID=rna-CCO47_RS02225;Parent=gene-CCO47_RS02225;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS02225;product=23S ribosomal RNA NZ_CP075113.1 cmsearch exon 467157 470064 . + . ID=exon-CCO47_RS02225-1;Parent=rna-CCO47_RS02225;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS02225;product=23S ribosomal RNA NZ_CP075113.1 RefSeq gene 470261 470376 . + . ID=gene-CCO47_RS02230;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO47_RS02230;old_locus_tag=CCO47_02230 NZ_CP075113.1 cmsearch rRNA 470261 470376 . + . ID=rna-CCO47_RS02230;Parent=gene-CCO47_RS02230;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS02230;product=5S ribosomal RNA NZ_CP075113.1 cmsearch exon 470261 470376 . + . ID=exon-CCO47_RS02230-1;Parent=rna-CCO47_RS02230;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS02230;product=5S ribosomal RNA NZ_CP075113.1 RefSeq gene 470391 470466 . + . ID=gene-CCO47_RS02235;Name=CCO47_RS02235;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS02235;old_locus_tag=CCO47_02235 NZ_CP075113.1 tRNAscan-SE tRNA 470391 470466 . + . ID=rna-CCO47_RS02235;Parent=gene-CCO47_RS02235;anticodon=(pos:470424..470426);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS02235;product=tRNA-Thr NZ_CP075113.1 tRNAscan-SE exon 470391 470466 . + . ID=exon-CCO47_RS02235-1;Parent=rna-CCO47_RS02235;anticodon=(pos:470424..470426);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS02235;product=tRNA-Thr NZ_CP075113.1 RefSeq gene 470506 470621 . + . ID=gene-CCO47_RS02240;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO47_RS02240;old_locus_tag=CCO47_02240 NZ_CP075113.1 cmsearch rRNA 470506 470621 . + . ID=rna-CCO47_RS02240;Parent=gene-CCO47_RS02240;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS02240;product=5S ribosomal RNA NZ_CP075113.1 cmsearch exon 470506 470621 . + . ID=exon-CCO47_RS02240-1;Parent=rna-CCO47_RS02240;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS02240;product=5S ribosomal RNA NZ_CP075113.1 RefSeq gene 471405 471626 . - . ID=gene-CCO47_RS02245;Name=CCO47_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02245;old_locus_tag=CCO47_02245 NZ_CP075113.1 Protein Homology CDS 471405 471626 . - 0 ID=cds-WP_000825645.1;Parent=gene-CCO47_RS02245;Dbxref=GenBank:WP_000825645.1;Name=WP_000825645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462302.1;locus_tag=CCO47_RS02245;product=putative periplasmic lipoprotein;protein_id=WP_000825645.1;transl_table=11 NZ_CP075113.1 RefSeq gene 471864 474977 . - . ID=gene-CCO47_RS02250;Name=CCO47_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02250;old_locus_tag=CCO47_02250 NZ_CP075113.1 Protein Homology CDS 471864 474977 . - 0 ID=cds-WP_001273279.1;Parent=gene-CCO47_RS02250;Dbxref=GenBank:WP_001273279.1;Name=WP_001273279.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=CCO47_RS02250;product=efflux RND transporter permease subunit;protein_id=WP_001273279.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 474989 476142 . - . ID=gene-CCO47_RS02255;Name=CCO47_RS02255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS02255;old_locus_tag=CCO47_02255;pseudo=true NZ_CP075113.1 Protein Homology CDS 474989 476142 . - 0 ID=cds-CCO47_RS02255;Parent=gene-CCO47_RS02255;Note=frameshifted;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=CCO47_RS02255;product=efflux RND transporter periplasmic adaptor subunit;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 476556 477218 . + . ID=gene-CCO47_RS02260;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=CCO47_RS02260;old_locus_tag=CCO47_02260 NZ_CP075113.1 Protein Homology CDS 476556 477218 . + 0 ID=cds-WP_001085725.1;Parent=gene-CCO47_RS02260;Dbxref=GenBank:WP_001085725.1;Name=WP_001085725.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462299.1;locus_tag=CCO47_RS02260;product=acrEF/envCD operon transcriptional regulator;protein_id=WP_001085725.1;transl_table=11 NZ_CP075113.1 RefSeq gene 477221 479320 . - . ID=gene-CCO47_RS02265;Name=CCO47_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02265;old_locus_tag=CCO47_02265 NZ_CP075113.1 Protein Homology CDS 477221 479320 . - 0 ID=cds-WP_001145322.1;Parent=gene-CCO47_RS02265;Dbxref=GenBank:WP_001145322.1;Name=WP_001145322.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=CCO47_RS02265;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_001145322.1;transl_table=11 NZ_CP075113.1 RefSeq gene 479471 479635 . - . ID=gene-CCO47_RS02270;Name=CCO47_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02270;old_locus_tag=CCO47_02270 NZ_CP075113.1 Protein Homology CDS 479471 479635 . - 0 ID=cds-WP_000620015.1;Parent=gene-CCO47_RS02270;Dbxref=GenBank:WP_000620015.1;Name=WP_000620015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=CCO47_RS02270;product=DUF2556 family protein;protein_id=WP_000620015.1;transl_table=11 NZ_CP075113.1 RefSeq gene 479718 480602 . - . ID=gene-CCO47_RS02275;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=CCO47_RS02275;old_locus_tag=CCO47_02275 NZ_CP075113.1 Protein Homology CDS 479718 480602 . - 0 ID=cds-WP_000642611.1;Parent=gene-CCO47_RS02275;Dbxref=GenBank:WP_000642611.1;Name=WP_000642611.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462296.1;locus_tag=CCO47_RS02275;product=adenine-specific DNA-methyltransferase;protein_id=WP_000642611.1;transl_table=11 NZ_CP075113.1 RefSeq gene 480688 480984 . - . ID=gene-CCO47_RS02280;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=CCO47_RS02280;old_locus_tag=CCO47_02280 NZ_CP075113.1 Protein Homology CDS 480688 480984 . - 0 ID=cds-WP_000462905.1;Parent=gene-CCO47_RS02280;Dbxref=GenBank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=CCO47_RS02280;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11 NZ_CP075113.1 RefSeq gene 481010 481975 . - . ID=gene-CCO47_RS02285;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=CCO47_RS02285;old_locus_tag=CCO47_02285 NZ_CP075113.1 Protein Homology CDS 481010 481975 . - 0 ID=cds-WP_001219664.1;Parent=gene-CCO47_RS02285;Dbxref=GenBank:WP_001219664.1;Name=WP_001219664.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=CCO47_RS02285;product=tRNA dihydrouridine synthase DusB;protein_id=WP_001219664.1;transl_table=11 NZ_CP075113.1 RefSeq gene 482636 483517 . - . ID=gene-CCO47_RS02290;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=CCO47_RS02290;old_locus_tag=CCO47_02290 NZ_CP075113.1 Protein Homology CDS 482636 483517 . - 0 ID=cds-WP_001145857.1;Parent=gene-CCO47_RS02290;Dbxref=GenBank:WP_001145857.1;Name=WP_001145857.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462293.1;locus_tag=CCO47_RS02290;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_001145857.1;transl_table=11 NZ_CP075113.1 RefSeq gene 483529 484980 . - . ID=gene-CCO47_RS02295;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=CCO47_RS02295;old_locus_tag=CCO47_02295 NZ_CP075113.1 Protein Homology CDS 483529 484980 . - 0 ID=cds-WP_001175741.1;Parent=gene-CCO47_RS02295;Dbxref=GenBank:WP_001175741.1;Name=WP_001175741.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462292.1;locus_tag=CCO47_RS02295;product=sodium/pantothenate symporter;protein_id=WP_001175741.1;transl_table=11 NZ_CP075113.1 RefSeq gene 484970 485212 . - . ID=gene-CCO47_RS02300;Name=CCO47_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02300;old_locus_tag=CCO47_02300 NZ_CP075113.1 Protein Homology CDS 484970 485212 . - 0 ID=cds-WP_000340018.1;Parent=gene-CCO47_RS02300;Dbxref=GenBank:WP_000340018.1;Name=WP_000340018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=CCO47_RS02300;product=YhdT family protein;protein_id=WP_000340018.1;transl_table=11 NZ_CP075113.1 RefSeq gene 485321 486670 . - . ID=gene-CCO47_RS02305;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=CCO47_RS02305;old_locus_tag=CCO47_02305 NZ_CP075113.1 Protein Homology CDS 485321 486670 . - 0 ID=cds-WP_000884627.1;Parent=gene-CCO47_RS02305;Dbxref=GenBank:WP_000884627.1;Name=WP_000884627.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=CCO47_RS02305;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884627.1;transl_table=11 NZ_CP075113.1 RefSeq gene 486681 487151 . - . ID=gene-CCO47_RS02310;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=CCO47_RS02310;old_locus_tag=CCO47_02310 NZ_CP075113.1 Protein Homology CDS 486681 487151 . - 0 ID=cds-WP_000354626.1;Parent=gene-CCO47_RS02310;Dbxref=GenBank:WP_000354626.1;Name=WP_000354626.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=CCO47_RS02310;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354626.1;transl_table=11 NZ_CP075113.1 RefSeq gene 487544 488143 . - . ID=gene-CCO47_RS02315;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=CCO47_RS02315;old_locus_tag=CCO47_02315 NZ_CP075113.1 Protein Homology CDS 487544 488143 . - 0 ID=cds-WP_001240055.1;Parent=gene-CCO47_RS02315;Dbxref=GenBank:WP_001240055.1;Name=WP_001240055.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462288.1;locus_tag=CCO47_RS02315;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_001240055.1;transl_table=11 NZ_CP075113.1 RefSeq gene 488144 489148 . - . ID=gene-CCO47_RS02320;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=CCO47_RS02320;old_locus_tag=CCO47_02320 NZ_CP075113.1 Protein Homology CDS 488144 489148 . - 0 ID=cds-WP_000723872.1;Parent=gene-CCO47_RS02320;Dbxref=GenBank:WP_000723872.1;Name=WP_000723872.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462287.1;locus_tag=CCO47_RS02320;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_000723872.1;transl_table=11 NZ_CP075113.1 RefSeq gene 489261 490235 . - . ID=gene-CCO47_RS02325;Name=acuI;gbkey=Gene;gene=acuI;gene_biotype=protein_coding;locus_tag=CCO47_RS02325;old_locus_tag=CCO47_02325 NZ_CP075113.1 Protein Homology CDS 489261 490235 . - 0 ID=cds-WP_001148247.1;Parent=gene-CCO47_RS02325;Dbxref=GenBank:WP_001148247.1;Name=WP_001148247.1;gbkey=CDS;gene=acuI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462286.1;locus_tag=CCO47_RS02325;product=acrylyl-CoA reductase (NADPH);protein_id=WP_001148247.1;transl_table=11 NZ_CP075113.1 RefSeq gene 490439 492379 . + . ID=gene-CCO47_RS02330;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=CCO47_RS02330;old_locus_tag=CCO47_02330 NZ_CP075113.1 Protein Homology CDS 490439 492379 . + 0 ID=cds-WP_001241378.1;Parent=gene-CCO47_RS02330;Dbxref=GenBank:WP_001241378.1;Name=WP_001241378.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462285.1;locus_tag=CCO47_RS02330;product=RNase E specificity factor CsrD;protein_id=WP_001241378.1;transl_table=11 NZ_CP075113.1 RefSeq gene 492687 493730 . + . ID=gene-CCO47_RS02335;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=CCO47_RS02335;old_locus_tag=CCO47_02335 NZ_CP075113.1 Protein Homology CDS 492687 493730 . + 0 ID=cds-WP_000913396.1;Parent=gene-CCO47_RS02335;Dbxref=GenBank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=CCO47_RS02335;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11 NZ_CP075113.1 RefSeq gene 493795 494847 . + . ID=gene-CCO47_RS02340;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=CCO47_RS02340;old_locus_tag=CCO47_02340 NZ_CP075113.1 Protein Homology CDS 493795 494847 . + 0 ID=cds-WP_000802538.1;Parent=gene-CCO47_RS02340;Dbxref=GenBank:WP_000802538.1;Name=WP_000802538.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=CCO47_RS02340;product=rod shape-determining protein MreC;protein_id=WP_000802538.1;transl_table=11 NZ_CP075113.1 RefSeq gene 494850 495338 . + . ID=gene-CCO47_RS02345;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=CCO47_RS02345;old_locus_tag=CCO47_02345 NZ_CP075113.1 Protein Homology CDS 494850 495338 . + 0 ID=cds-WP_000179403.1;Parent=gene-CCO47_RS02345;Dbxref=GenBank:WP_000179403.1;Name=WP_000179403.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=CCO47_RS02345;product=rod shape-determining protein MreD;protein_id=WP_000179403.1;transl_table=11 NZ_CP075113.1 RefSeq gene 495347 495940 . + . ID=gene-CCO47_RS02350;Name=CCO47_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02350;old_locus_tag=CCO47_02350 NZ_CP075113.1 Protein Homology CDS 495347 495940 . + 0 ID=cds-WP_000210304.1;Parent=gene-CCO47_RS02350;Dbxref=GenBank:WP_000210304.1;Name=WP_000210304.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462281.1;locus_tag=CCO47_RS02350;product=Maf family protein;protein_id=WP_000210304.1;transl_table=11 NZ_CP075113.1 RefSeq gene 495930 497399 . + . ID=gene-CCO47_RS02355;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=CCO47_RS02355;old_locus_tag=CCO47_02355 NZ_CP075113.1 Protein Homology CDS 495930 497399 . + 0 ID=cds-WP_000123188.1;Parent=gene-CCO47_RS02355;Dbxref=GenBank:WP_000123188.1;Name=WP_000123188.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=CCO47_RS02355;product=ribonuclease G;protein_id=WP_000123188.1;transl_table=11 NZ_CP075113.1 RefSeq gene 497510 501310 . + . ID=gene-CCO47_RS02360;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=CCO47_RS02360;old_locus_tag=CCO47_02360 NZ_CP075113.1 Protein Homology CDS 497510 501310 . + 0 ID=cds-WP_001253513.1;Parent=gene-CCO47_RS02360;Dbxref=GenBank:WP_001253513.1;Name=WP_001253513.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=CCO47_RS02360;product=AsmA2 domain-containing protein YhdP;protein_id=WP_001253513.1;transl_table=11 NZ_CP075113.1 RefSeq gene 501455 502900 . + . ID=gene-CCO47_RS02365;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=CCO47_RS02365;old_locus_tag=CCO47_02365 NZ_CP075113.1 Protein Homology CDS 501455 502900 . + 0 ID=cds-WP_000055941.1;Parent=gene-CCO47_RS02365;Dbxref=GenBank:WP_000055941.1;Name=WP_000055941.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462278.1;locus_tag=CCO47_RS02365;product=metalloprotease TldD;protein_id=WP_000055941.1;transl_table=11 NZ_CP075113.1 RefSeq gene 503022 503951 . - . ID=gene-CCO47_RS02370;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=CCO47_RS02370;old_locus_tag=CCO47_02370 NZ_CP075113.1 Protein Homology CDS 503022 503951 . - 0 ID=cds-WP_000440300.1;Parent=gene-CCO47_RS02370;Dbxref=GenBank:WP_000440300.1;Name=WP_000440300.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462277.1;locus_tag=CCO47_RS02370;product=HTH-type transcriptional activator AaeR;protein_id=WP_000440300.1;transl_table=11 NZ_CP075113.1 RefSeq gene 504133 504336 . + . ID=gene-CCO47_RS02375;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=CCO47_RS02375;old_locus_tag=CCO47_02375 NZ_CP075113.1 Protein Homology CDS 504133 504336 . + 0 ID=cds-WP_000051840.1;Parent=gene-CCO47_RS02375;Dbxref=GenBank:WP_000051840.1;Name=WP_000051840.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=CCO47_RS02375;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_000051840.1;transl_table=11 NZ_CP075113.1 RefSeq gene 504344 505276 . + . ID=gene-CCO47_RS02380;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=CCO47_RS02380;old_locus_tag=CCO47_02380 NZ_CP075113.1 Protein Homology CDS 504344 505276 . + 0 ID=cds-WP_000855134.1;Parent=gene-CCO47_RS02380;Dbxref=GenBank:WP_000855134.1;Name=WP_000855134.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462275.1;locus_tag=CCO47_RS02380;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000855134.1;transl_table=11 NZ_CP075113.1 RefSeq gene 505282 507249 . + . ID=gene-CCO47_RS02385;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=CCO47_RS02385;old_locus_tag=CCO47_02385 NZ_CP075113.1 Protein Homology CDS 505282 507249 . + 0 ID=cds-WP_000510913.1;Parent=gene-CCO47_RS02385;Dbxref=GenBank:WP_000510913.1;Name=WP_000510913.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=CCO47_RS02385;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_000510913.1;transl_table=11 NZ_CP075113.1 RefSeq gene 507421 507693 . + . ID=gene-CCO47_RS02390;Name=CCO47_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02390;old_locus_tag=CCO47_02390 NZ_CP075113.1 Protein Homology CDS 507421 507693 . + 0 ID=cds-WP_001103887.1;Parent=gene-CCO47_RS02390;Dbxref=GenBank:WP_001103887.1;Name=WP_001103887.1;Ontology_term=GO:0046983;gbkey=CDS;go_function=protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462273.1;locus_tag=CCO47_RS02390;product=barstar family protein;protein_id=WP_001103887.1;transl_table=11 NZ_CP075113.1 RefSeq gene 507753 508019 . - . ID=gene-CCO47_RS02395;Name=yhcN-B;gbkey=Gene;gene=yhcN-B;gene_biotype=protein_coding;locus_tag=CCO47_RS02395;old_locus_tag=CCO47_02395 NZ_CP075113.1 Protein Homology CDS 507753 508019 . - 0 ID=cds-WP_000853277.1;Parent=gene-CCO47_RS02395;Dbxref=GenBank:WP_000853277.1;Name=WP_000853277.1;gbkey=CDS;gene=yhcN-B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=CCO47_RS02395;product=DUF1471 family stress response protein YhcN-B;protein_id=WP_000853277.1;transl_table=11 NZ_CP075113.1 RefSeq gene 508123 508386 . - . ID=gene-CCO47_RS02400;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=CCO47_RS02400;old_locus_tag=CCO47_02400 NZ_CP075113.1 Protein Homology CDS 508123 508386 . - 0 ID=cds-WP_000695694.1;Parent=gene-CCO47_RS02400;Dbxref=GenBank:WP_000695694.1;Name=WP_000695694.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=CCO47_RS02400;product=peroxide/acid stress response protein YhcN;protein_id=WP_000695694.1;transl_table=11 NZ_CP075113.1 RefSeq gene 508751 509221 . - . ID=gene-CCO47_RS02405;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=CCO47_RS02405;old_locus_tag=CCO47_02405 NZ_CP075113.1 Protein Homology CDS 508751 509221 . - 0 ID=cds-WP_001257852.1;Parent=gene-CCO47_RS02405;Dbxref=GenBank:WP_001257852.1;Name=WP_001257852.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=CCO47_RS02405;product=transcriptional regulator ArgR;protein_id=WP_001257852.1;transl_table=11 NZ_CP075113.1 RefSeq gene 509636 510574 . + . ID=gene-CCO47_RS02410;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=CCO47_RS02410;old_locus_tag=CCO47_02410 NZ_CP075113.1 Protein Homology CDS 509636 510574 . + 0 ID=cds-WP_000861593.1;Parent=gene-CCO47_RS02410;Dbxref=GenBank:WP_000861593.1;Name=WP_000861593.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=CCO47_RS02410;product=malate dehydrogenase;protein_id=WP_000861593.1;transl_table=11 NZ_CP075113.1 RefSeq gene 510694 511323 . + . ID=gene-CCO47_RS02415;Name=CCO47_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02415;old_locus_tag=CCO47_02415 NZ_CP075113.1 Protein Homology CDS 510694 511323 . + 0 ID=cds-WP_000723776.1;Parent=gene-CCO47_RS02415;Dbxref=GenBank:WP_000723776.1;Name=WP_000723776.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=CCO47_RS02415;product=GntR family transcriptional regulator;protein_id=WP_000723776.1;transl_table=11 NZ_CP075113.1 RefSeq gene 511310 511975 . + . ID=gene-CCO47_RS02420;Name=CCO47_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02420;old_locus_tag=CCO47_02420 NZ_CP075113.1 Protein Homology CDS 511310 511975 . + 0 ID=cds-WP_001171585.1;Parent=gene-CCO47_RS02420;Dbxref=GenBank:WP_001171585.1;Name=WP_001171585.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=CCO47_RS02420;product=GntR family transcriptional regulator;protein_id=WP_001171585.1;transl_table=11 NZ_CP075113.1 RefSeq gene 512186 513454 . + . ID=gene-CCO47_RS02425;Name=CCO47_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02425;old_locus_tag=CCO47_02425 NZ_CP075113.1 Protein Homology CDS 512186 513454 . + 0 ID=cds-WP_000433393.1;Parent=gene-CCO47_RS02425;Dbxref=GenBank:WP_000433393.1;Name=WP_000433393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=CCO47_RS02425;product=SLC13 family permease;protein_id=WP_000433393.1;transl_table=11 NZ_CP075113.1 RefSeq gene 513487 514386 . + . ID=gene-CCO47_RS02430;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=CCO47_RS02430;old_locus_tag=CCO47_02430 NZ_CP075113.1 Protein Homology CDS 513487 514386 . + 0 ID=cds-WP_000045350.1;Parent=gene-CCO47_RS02430;Dbxref=GenBank:WP_000045350.1;Name=WP_000045350.1;Ontology_term=GO:0008730;gbkey=CDS;gene=ttdA;go_function=L(+)-tartrate dehydratase activity|0008730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462265.1;locus_tag=CCO47_RS02430;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000045350.1;transl_table=11 NZ_CP075113.1 RefSeq gene 514386 515003 . + . ID=gene-CCO47_RS02435;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=CCO47_RS02435;old_locus_tag=CCO47_02435 NZ_CP075113.1 Protein Homology CDS 514386 515003 . + 0 ID=cds-WP_000162404.1;Parent=gene-CCO47_RS02435;Dbxref=GenBank:WP_000162404.1;Name=WP_000162404.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462264.1;locus_tag=CCO47_RS02435;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000162404.1;transl_table=11 NZ_CP075113.1 RefSeq gene 515160 515402 . + . ID=gene-CCO47_RS02440;Name=CCO47_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02440;old_locus_tag=CCO47_02440 NZ_CP075113.1 Protein Homology CDS 515160 515402 . + 0 ID=cds-WP_000180123.1;Parent=gene-CCO47_RS02440;Dbxref=GenBank:WP_000180123.1;Name=WP_000180123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462263.1;locus_tag=CCO47_RS02440;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_000180123.1;transl_table=11 NZ_CP075113.1 RefSeq gene 515418 517190 . + . ID=gene-CCO47_RS02445;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=CCO47_RS02445;old_locus_tag=CCO47_02445 NZ_CP075113.1 Protein Homology CDS 515418 517190 . + 0 ID=cds-WP_000150437.1;Parent=gene-CCO47_RS02445;Dbxref=GenBank:WP_000150437.1;Name=WP_000150437.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=CCO47_RS02445;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_000150437.1;transl_table=11 NZ_CP075113.1 RefSeq gene 517203 518504 . + . ID=gene-CCO47_RS02450;Name=CCO47_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02450;old_locus_tag=CCO47_02450 NZ_CP075113.1 Protein Homology CDS 517203 518504 . + 0 ID=cds-WP_000444847.1;Parent=gene-CCO47_RS02450;Dbxref=GenBank:WP_000444847.1;Name=WP_000444847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=CCO47_RS02450;product=oxalacetate decarboxylase subunit beta;protein_id=WP_000444847.1;transl_table=11 NZ_CP075113.1 RefSeq gene 518524 519255 . + . ID=gene-CCO47_RS02455;Name=CCO47_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02455;old_locus_tag=CCO47_02455 NZ_CP075113.1 Protein Homology CDS 518524 519255 . + 0 ID=cds-WP_000602034.1;Parent=gene-CCO47_RS02455;Dbxref=GenBank:WP_000602034.1;Name=WP_000602034.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462260.1;locus_tag=CCO47_RS02455;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_000602034.1;transl_table=11 NZ_CP075113.1 RefSeq gene 519289 520359 . - . ID=gene-CCO47_RS02460;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=CCO47_RS02460;old_locus_tag=CCO47_02460 NZ_CP075113.1 Protein Homology CDS 519289 520359 . - 0 ID=cds-WP_000497705.1;Parent=gene-CCO47_RS02460;Dbxref=GenBank:WP_000497705.1;Name=WP_000497705.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462259.1;locus_tag=CCO47_RS02460;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_000497705.1;transl_table=11 NZ_CP075113.1 RefSeq gene 520452 521819 . - . ID=gene-CCO47_RS02465;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=CCO47_RS02465;old_locus_tag=CCO47_02465 NZ_CP075113.1 Protein Homology CDS 520452 521819 . - 0 ID=cds-WP_000716697.1;Parent=gene-CCO47_RS02465;Dbxref=GenBank:WP_000716697.1;Name=WP_000716697.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462258.1;locus_tag=CCO47_RS02465;product=serine endoprotease DegQ;protein_id=WP_000716697.1;transl_table=11 NZ_CP075113.1 RefSeq gene 521976 522374 . - . ID=gene-CCO47_RS02470;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=CCO47_RS02470;old_locus_tag=CCO47_02470 NZ_CP075113.1 Protein Homology CDS 521976 522374 . - 0 ID=cds-WP_001519074.1;Parent=gene-CCO47_RS02470;Dbxref=GenBank:WP_001519074.1;Name=WP_001519074.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=CCO47_RS02470;product=Z-ring associated protein ZapG;protein_id=WP_001519074.1;transl_table=11 NZ_CP075113.1 RefSeq gene 522567 523691 . + . ID=gene-CCO47_RS02475;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=CCO47_RS02475;old_locus_tag=CCO47_02475 NZ_CP075113.1 Protein Homology CDS 522567 523691 . + 0 ID=cds-WP_001191221.1;Parent=gene-CCO47_RS02475;Dbxref=GenBank:WP_001191221.1;Name=WP_001191221.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462256.1;locus_tag=CCO47_RS02475;product=cell division protein ZapE;protein_id=WP_001191221.1;transl_table=11 NZ_CP075113.1 RefSeq gene 523993 524421 . + . ID=gene-CCO47_RS02480;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=CCO47_RS02480;old_locus_tag=CCO47_02480 NZ_CP075113.1 Protein Homology CDS 523993 524421 . + 0 ID=cds-WP_000847559.1;Parent=gene-CCO47_RS02480;Dbxref=GenBank:WP_000847559.1;Name=WP_000847559.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=CCO47_RS02480;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11 NZ_CP075113.1 RefSeq gene 524437 524829 . + . ID=gene-CCO47_RS02485;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=CCO47_RS02485;old_locus_tag=CCO47_02485 NZ_CP075113.1 Protein Homology CDS 524437 524829 . + 0 ID=cds-WP_000829815.1;Parent=gene-CCO47_RS02485;Dbxref=GenBank:WP_000829815.1;Name=WP_000829815.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=CCO47_RS02485;product=30S ribosomal protein S9;protein_id=WP_000829815.1;transl_table=11 NZ_CP075113.1 RefSeq gene 525029 525781 . + . ID=gene-CCO47_RS02490;Name=CCO47_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02490;old_locus_tag=CCO47_02490 NZ_CP075113.1 Protein Homology CDS 525029 525781 . + 0 ID=cds-WP_000950539.1;Parent=gene-CCO47_RS02490;Dbxref=GenBank:WP_000950539.1;Name=WP_000950539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462253.1;locus_tag=CCO47_RS02490;product=DUF695 domain-containing protein;protein_id=WP_000950539.1;transl_table=11 NZ_CP075113.1 RefSeq gene 526044 526682 . + . ID=gene-CCO47_RS02495;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=CCO47_RS02495;old_locus_tag=CCO47_02495 NZ_CP075113.1 Protein Homology CDS 526044 526682 . + 0 ID=cds-WP_000257298.1;Parent=gene-CCO47_RS02495;Dbxref=GenBank:WP_000257298.1;Name=WP_000257298.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=CCO47_RS02495;product=stringent starvation protein SspA;protein_id=WP_000257298.1;transl_table=11 NZ_CP075113.1 RefSeq gene 526688 527188 . + . ID=gene-CCO47_RS02500;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=CCO47_RS02500;old_locus_tag=CCO47_02500 NZ_CP075113.1 Protein Homology CDS 526688 527188 . + 0 ID=cds-WP_000366112.1;Parent=gene-CCO47_RS02500;Dbxref=GenBank:WP_000366112.1;Name=WP_000366112.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462251.1;locus_tag=CCO47_RS02500;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366112.1;transl_table=11 NZ_CP075113.1 RefSeq gene 527297 528088 . + . ID=gene-CCO47_RS02505;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=CCO47_RS02505;old_locus_tag=CCO47_02505 NZ_CP075113.1 Protein Homology CDS 527297 528088 . + 0 ID=cds-WP_000382926.1;Parent=gene-CCO47_RS02505;Dbxref=GenBank:WP_000382926.1;Name=WP_000382926.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462250.1;locus_tag=CCO47_RS02505;product=transcriptional regulator NanR;protein_id=WP_000382926.1;transl_table=11 NZ_CP075113.1 RefSeq gene 528223 529116 . + . ID=gene-CCO47_RS02510;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=CCO47_RS02510;old_locus_tag=CCO47_02510 NZ_CP075113.1 Protein Homology CDS 528223 529116 . + 0 ID=cds-WP_001029665.1;Parent=gene-CCO47_RS02510;Dbxref=GenBank:WP_001029665.1;Name=WP_001029665.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462249.1;locus_tag=CCO47_RS02510;product=N-acetylneuraminate lyase;protein_id=WP_001029665.1;transl_table=11 NZ_CP075113.1 RefSeq gene 529232 530722 . + . ID=gene-CCO47_RS02515;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=CCO47_RS02515;old_locus_tag=CCO47_02515 NZ_CP075113.1 Protein Homology CDS 529232 530722 . + 0 ID=cds-WP_000108071.1;Parent=gene-CCO47_RS02515;Dbxref=GenBank:WP_000108071.1;Name=WP_000108071.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462248.1;locus_tag=CCO47_RS02515;product=sialic acid transporter NanT;protein_id=WP_000108071.1;transl_table=11 NZ_CP075113.1 RefSeq gene 530769 531458 . + . ID=gene-CCO47_RS02520;Name=CCO47_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02520;old_locus_tag=CCO47_02520 NZ_CP075113.1 Protein Homology CDS 530769 531458 . + 0 ID=cds-WP_000054439.1;Parent=gene-CCO47_RS02520;Dbxref=GenBank:WP_000054439.1;Name=WP_000054439.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=CCO47_RS02520;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054439.1;transl_table=11 NZ_CP075113.1 RefSeq gene 531455 532330 . + . ID=gene-CCO47_RS02525;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=CCO47_RS02525;old_locus_tag=CCO47_02525 NZ_CP075113.1 Protein Homology CDS 531455 532330 . + 0 ID=cds-WP_000208970.1;Parent=gene-CCO47_RS02525;Dbxref=GenBank:WP_000208970.1;Name=WP_000208970.1;Ontology_term=GO:0019262,GO:0005524,GO:0009384;gbkey=CDS;gene=nanK;go_function=ATP binding|0005524||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462246.1;locus_tag=CCO47_RS02525;product=N-acetylmannosamine kinase;protein_id=WP_000208970.1;transl_table=11 NZ_CP075113.1 RefSeq gene 532327 532794 . + . ID=gene-CCO47_RS02530;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=CCO47_RS02530;old_locus_tag=CCO47_02530 NZ_CP075113.1 Protein Homology CDS 532327 532794 . + 0 ID=cds-WP_000979905.1;Parent=gene-CCO47_RS02530;Dbxref=GenBank:WP_000979905.1;Name=WP_000979905.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462245.1;locus_tag=CCO47_RS02530;product=N-acetylneuraminate anomerase;protein_id=WP_000979905.1;transl_table=11 NZ_CP075113.1 RefSeq gene 532876 534156 . - . ID=gene-CCO47_RS02535;Name=CCO47_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02535;old_locus_tag=CCO47_02535 NZ_CP075113.1 Protein Homology CDS 532876 534156 . - 0 ID=cds-WP_001180689.1;Parent=gene-CCO47_RS02535;Dbxref=GenBank:WP_001180689.1;Name=WP_001180689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462244.1;locus_tag=CCO47_RS02535;product=cytosine deaminase;protein_id=WP_001180689.1;transl_table=11 NZ_CP075113.1 RefSeq gene 534143 535396 . - . ID=gene-CCO47_RS02540;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=CCO47_RS02540;old_locus_tag=CCO47_02540 NZ_CP075113.1 Protein Homology CDS 534143 535396 . - 0 ID=cds-WP_000076269.1;Parent=gene-CCO47_RS02540;Dbxref=GenBank:WP_000076269.1;Name=WP_000076269.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=CCO47_RS02540;product=cytosine permease;protein_id=WP_000076269.1;transl_table=11 NZ_CP075113.1 RefSeq gene 535512 536615 . - . ID=gene-CCO47_RS02545;Name=CCO47_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02545;old_locus_tag=CCO47_02545 NZ_CP075113.1 Protein Homology CDS 535512 536615 . - 0 ID=cds-WP_000184321.1;Parent=gene-CCO47_RS02545;Dbxref=GenBank:WP_000184321.1;Name=WP_000184321.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462242.1;locus_tag=CCO47_RS02545;product=PDDEXK nuclease domain-containing protein;protein_id=WP_000184321.1;transl_table=11 NZ_CP075113.1 RefSeq gene 536823 538241 . - . ID=gene-CCO47_RS02550;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=CCO47_RS02550;old_locus_tag=CCO47_02550 NZ_CP075113.1 Protein Homology CDS 536823 538241 . - 0 ID=cds-WP_000081705.1;Parent=gene-CCO47_RS02550;Dbxref=GenBank:WP_000081705.1;Name=WP_000081705.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=CCO47_RS02550;product=glutamate synthase subunit GltD;protein_id=WP_000081705.1;transl_table=11 NZ_CP075113.1 RefSeq gene 538251 542711 . - . ID=gene-CCO47_RS02555;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=CCO47_RS02555;old_locus_tag=CCO47_02555 NZ_CP075113.1 Protein Homology CDS 538251 542711 . - 0 ID=cds-WP_000965036.1;Parent=gene-CCO47_RS02555;Dbxref=GenBank:WP_000965036.1;Name=WP_000965036.1;Ontology_term=GO:0008152,GO:0097054,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=metabolic process|0008152||IEA,L-glutamate biosynthetic process|0097054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=CCO47_RS02555;product=glutamate synthase large subunit;protein_id=WP_000965036.1;transl_table=11 NZ_CP075113.1 RefSeq gene 543383 544312 . + . ID=gene-CCO47_RS02560;Name=mnmL;gbkey=Gene;gene=mnmL;gene_biotype=protein_coding;gene_synonym=ytqA;locus_tag=CCO47_RS02560;old_locus_tag=CCO47_02560 NZ_CP075113.1 Protein Homology CDS 543383 544312 . + 0 ID=cds-WP_001176879.1;Parent=gene-CCO47_RS02560;Dbxref=GenBank:WP_001176879.1;Name=WP_001176879.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0006400,GO:0051536,GO:1904047;gbkey=CDS;gene=mnmL;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462239.1;locus_tag=CCO47_RS02560;product=tRNA modification radical SAM protein MnmL/YtqA;protein_id=WP_001176879.1;transl_table=11 NZ_CP075113.1 RefSeq gene 544406 546742 . + . ID=gene-CCO47_RS02565;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=CCO47_RS02565;old_locus_tag=CCO47_02565 NZ_CP075113.1 Protein Homology CDS 544406 546742 . + 0 ID=cds-WP_000809824.1;Parent=gene-CCO47_RS02565;Dbxref=GenBank:WP_000809824.1;Name=WP_000809824.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462238.1;locus_tag=CCO47_RS02565;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_000809824.1;transl_table=11 NZ_CP075113.1 RefSeq gene 546969 547622 . + . ID=gene-CCO47_RS02570;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=CCO47_RS02570;old_locus_tag=CCO47_02570 NZ_CP075113.1 Protein Homology CDS 546969 547622 . + 0 ID=cds-WP_000719811.1;Parent=gene-CCO47_RS02570;Dbxref=GenBank:WP_000719811.1;Name=WP_000719811.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462237.1;locus_tag=CCO47_RS02570;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_000719811.1;transl_table=11 NZ_CP075113.1 RefSeq gene 547619 548347 . + . ID=gene-CCO47_RS02575;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=CCO47_RS02575;old_locus_tag=CCO47_02575 NZ_CP075113.1 Protein Homology CDS 547619 548347 . + 0 ID=cds-WP_000044644.1;Parent=gene-CCO47_RS02575;Dbxref=GenBank:WP_000044644.1;Name=WP_000044644.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462236.1;locus_tag=CCO47_RS02575;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_000044644.1;transl_table=11 NZ_CP075113.1 RefSeq gene 548422 549054 . - . ID=gene-CCO47_RS02580;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=CCO47_RS02580;old_locus_tag=CCO47_02580 NZ_CP075113.1 Protein Homology CDS 548422 549054 . - 0 ID=cds-WP_000602193.1;Parent=gene-CCO47_RS02580;Dbxref=GenBank:WP_000602193.1;Name=WP_000602193.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462235.1;locus_tag=CCO47_RS02580;product=PhoP regulatory network protein YrbL;protein_id=WP_000602193.1;transl_table=11 NZ_CP075113.1 RefSeq gene 549304 549576 . - . ID=gene-CCO47_RS02585;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=CCO47_RS02585;old_locus_tag=CCO47_02585 NZ_CP075113.1 Protein Homology CDS 549304 549576 . - 0 ID=cds-WP_000216797.1;Parent=gene-CCO47_RS02585;Dbxref=GenBank:WP_000216797.1;Name=WP_000216797.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=CCO47_RS02585;product=PTS phosphocarrier protein NPr;protein_id=WP_000216797.1;transl_table=11 NZ_CP075113.1 RefSeq gene 549573 550427 . - . ID=gene-CCO47_RS02590;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=CCO47_RS02590;old_locus_tag=CCO47_02590 NZ_CP075113.1 Protein Homology CDS 549573 550427 . - 0 ID=cds-WP_000243749.1;Parent=gene-CCO47_RS02590;Dbxref=GenBank:WP_000243749.1;Name=WP_000243749.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462233.1;locus_tag=CCO47_RS02590;product=RNase adapter RapZ;protein_id=WP_000243749.1;transl_table=11 NZ_CP075113.1 RefSeq gene 550473 550964 . - . ID=gene-CCO47_RS02595;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=CCO47_RS02595;old_locus_tag=CCO47_02595 NZ_CP075113.1 Protein Homology CDS 550473 550964 . - 0 ID=cds-WP_000609332.1;Parent=gene-CCO47_RS02595;Dbxref=GenBank:WP_000609332.1;Name=WP_000609332.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462232.1;locus_tag=CCO47_RS02595;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000609332.1;transl_table=11 NZ_CP075113.1 RefSeq gene 551082 551369 . - . ID=gene-CCO47_RS02600;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=CCO47_RS02600;old_locus_tag=CCO47_02600 NZ_CP075113.1 Protein Homology CDS 551082 551369 . - 0 ID=cds-WP_001176589.1;Parent=gene-CCO47_RS02600;Dbxref=GenBank:WP_001176589.1;Name=WP_001176589.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=CCO47_RS02600;product=ribosome hibernation promoting factor;protein_id=WP_001176589.1;transl_table=11 NZ_CP075113.1 RefSeq gene 551392 552825 . - . ID=gene-CCO47_RS02605;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=CCO47_RS02605;old_locus_tag=CCO47_02605 NZ_CP075113.1 Protein Homology CDS 551392 552825 . - 0 ID=cds-WP_000809020.1;Parent=gene-CCO47_RS02605;Dbxref=GenBank:WP_000809020.1;Name=WP_000809020.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=CCO47_RS02605;product=RNA polymerase factor sigma-54;protein_id=WP_000809020.1;transl_table=11 NZ_CP075113.1 RefSeq gene 552873 553598 . - . ID=gene-CCO47_RS02610;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=CCO47_RS02610;old_locus_tag=CCO47_02610 NZ_CP075113.1 Protein Homology CDS 552873 553598 . - 0 ID=cds-WP_000224104.1;Parent=gene-CCO47_RS02610;Dbxref=GenBank:WP_000224104.1;Name=WP_000224104.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=CCO47_RS02610;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224104.1;transl_table=11 NZ_CP075113.1 RefSeq gene 553605 554159 . - . ID=gene-CCO47_RS02615;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=CCO47_RS02615;old_locus_tag=CCO47_02615 NZ_CP075113.1 Protein Homology CDS 553605 554159 . - 0 ID=cds-WP_000669770.1;Parent=gene-CCO47_RS02615;Dbxref=GenBank:WP_000669770.1;Name=WP_000669770.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=CCO47_RS02615;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669770.1;transl_table=11 NZ_CP075113.1 RefSeq gene 554128 554703 . - . ID=gene-CCO47_RS02620;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=CCO47_RS02620;old_locus_tag=CCO47_02620 NZ_CP075113.1 Protein Homology CDS 554128 554703 . - 0 ID=cds-WP_000047846.1;Parent=gene-CCO47_RS02620;Dbxref=GenBank:WP_000047846.1;Name=WP_000047846.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462227.1;locus_tag=CCO47_RS02620;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000047846.1;transl_table=11 NZ_CP075113.1 RefSeq gene 554700 555266 . - . ID=gene-CCO47_RS02625;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=CCO47_RS02625;old_locus_tag=CCO47_02625 NZ_CP075113.1 Protein Homology CDS 554700 555266 . - 0 ID=cds-WP_000030029.1;Parent=gene-CCO47_RS02625;Dbxref=GenBank:WP_000030029.1;Name=WP_000030029.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462226.1;locus_tag=CCO47_RS02625;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030029.1;transl_table=11 NZ_CP075113.1 RefSeq gene 555287 556273 . - . ID=gene-CCO47_RS02630;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=CCO47_RS02630;old_locus_tag=CCO47_02630 NZ_CP075113.1 Protein Homology CDS 555287 556273 . - 0 ID=cds-WP_000018617.1;Parent=gene-CCO47_RS02630;Dbxref=GenBank:WP_000018617.1;Name=WP_000018617.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=CCO47_RS02630;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_000018617.1;transl_table=11 NZ_CP075113.1 RefSeq gene 556287 557264 . - . ID=gene-CCO47_RS02635;Name=CCO47_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02635;old_locus_tag=CCO47_02635 NZ_CP075113.1 Protein Homology CDS 556287 557264 . - 0 ID=cds-WP_000922742.1;Parent=gene-CCO47_RS02635;Dbxref=GenBank:WP_000922742.1;Name=WP_000922742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462224.1;locus_tag=CCO47_RS02635;product=calcium/sodium antiporter;protein_id=WP_000922742.1;transl_table=11 NZ_CP075113.1 RefSeq gene 557477 558289 . + . ID=gene-CCO47_RS02640;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=CCO47_RS02640;old_locus_tag=CCO47_02640 NZ_CP075113.1 Protein Homology CDS 557477 558289 . + 0 ID=cds-WP_000531566.1;Parent=gene-CCO47_RS02640;Dbxref=GenBank:WP_000531566.1;Name=WP_000531566.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462223.1;locus_tag=CCO47_RS02640;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000531566.1;transl_table=11 NZ_CP075113.1 RefSeq gene 558297 559079 . + . ID=gene-CCO47_RS02645;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=CCO47_RS02645;old_locus_tag=CCO47_02645 NZ_CP075113.1 Protein Homology CDS 558297 559079 . + 0 ID=cds-WP_000925786.1;Parent=gene-CCO47_RS02645;Dbxref=GenBank:WP_000925786.1;Name=WP_000925786.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=CCO47_RS02645;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925786.1;transl_table=11 NZ_CP075113.1 RefSeq gene 559084 559635 . + . ID=gene-CCO47_RS02650;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=CCO47_RS02650;old_locus_tag=CCO47_02650 NZ_CP075113.1 Protein Homology CDS 559084 559635 . + 0 ID=cds-WP_001193591.1;Parent=gene-CCO47_RS02650;Dbxref=GenBank:WP_001193591.1;Name=WP_001193591.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462221.1;locus_tag=CCO47_RS02650;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001193591.1;transl_table=11 NZ_CP075113.1 RefSeq gene 559654 560289 . + . ID=gene-CCO47_RS02655;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=CCO47_RS02655;old_locus_tag=CCO47_02655 NZ_CP075113.1 Protein Homology CDS 559654 560289 . + 0 ID=cds-WP_000476475.1;Parent=gene-CCO47_RS02655;Dbxref=GenBank:WP_000476475.1;Name=WP_000476475.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462220.1;locus_tag=CCO47_RS02655;product=phospholipid-binding protein MlaC;protein_id=WP_000476475.1;transl_table=11 NZ_CP075113.1 RefSeq gene 560289 560585 . + . ID=gene-CCO47_RS02660;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=CCO47_RS02660;old_locus_tag=CCO47_02660 NZ_CP075113.1 Protein Homology CDS 560289 560585 . + 0 ID=cds-WP_000188844.1;Parent=gene-CCO47_RS02660;Dbxref=GenBank:WP_000188844.1;Name=WP_000188844.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462219.1;locus_tag=CCO47_RS02660;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000188844.1;transl_table=11 NZ_CP075113.1 RefSeq gene 560773 561027 . + . ID=gene-CCO47_RS02665;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=CCO47_RS02665;old_locus_tag=CCO47_02665 NZ_CP075113.1 Protein Homology CDS 560773 561027 . + 0 ID=cds-WP_001518349.1;Parent=gene-CCO47_RS02665;Dbxref=GenBank:WP_001518349.1;Name=WP_001518349.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=CCO47_RS02665;product=BolA family iron metabolism protein IbaG;protein_id=WP_001518349.1;transl_table=11 NZ_CP075113.1 RefSeq gene 561081 562340 . + . ID=gene-CCO47_RS02670;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=CCO47_RS02670;old_locus_tag=CCO47_02670 NZ_CP075113.1 Protein Homology CDS 561081 562340 . + 0 ID=cds-WP_000357287.1;Parent=gene-CCO47_RS02670;Dbxref=GenBank:WP_000357287.1;Name=WP_000357287.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462217.1;locus_tag=CCO47_RS02670;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357287.1;transl_table=11 NZ_CP075113.1 RefSeq gene 562399 562686 . - . ID=gene-CCO47_RS02675;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=CCO47_RS02675;old_locus_tag=CCO47_02675 NZ_CP075113.1 Protein Homology CDS 562399 562686 . - 0 ID=cds-WP_000444167.1;Parent=gene-CCO47_RS02675;Dbxref=GenBank:WP_000444167.1;Name=WP_000444167.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462216.1;locus_tag=CCO47_RS02675;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000444167.1;transl_table=11 NZ_CP075113.1 RefSeq gene 562918 563889 . - . ID=gene-CCO47_RS02680;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=CCO47_RS02680;old_locus_tag=CCO47_02680 NZ_CP075113.1 Protein Homology CDS 562918 563889 . - 0 ID=cds-WP_001047354.1;Parent=gene-CCO47_RS02680;Dbxref=GenBank:WP_001047354.1;Name=WP_001047354.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462215.1;locus_tag=CCO47_RS02680;product=octaprenyl diphosphate synthase;protein_id=WP_001047354.1;transl_table=11 NZ_CP075113.1 RefSeq gene 564147 564458 . + . ID=gene-CCO47_RS02685;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=CCO47_RS02685;old_locus_tag=CCO47_02685 NZ_CP075113.1 Protein Homology CDS 564147 564458 . + 0 ID=cds-WP_000271396.1;Parent=gene-CCO47_RS02685;Dbxref=GenBank:WP_000271396.1;Name=WP_000271396.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=CCO47_RS02685;product=50S ribosomal protein L21;protein_id=WP_000271396.1;transl_table=11 NZ_CP075113.1 RefSeq gene 564478 564735 . + . ID=gene-CCO47_RS02690;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=CCO47_RS02690;old_locus_tag=CCO47_02690 NZ_CP075113.1 Protein Homology CDS 564478 564735 . + 0 ID=cds-WP_000940593.1;Parent=gene-CCO47_RS02690;Dbxref=GenBank:WP_000940593.1;Name=WP_000940593.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=CCO47_RS02690;product=50S ribosomal protein L27;protein_id=WP_000940593.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 564865 565820 . + . ID=gene-CCO47_RS02695;Name=CCO47_RS02695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS02695;old_locus_tag=CCO47_02695;pseudo=true NZ_CP075113.1 Protein Homology CDS 564865 565820 . + 0 ID=cds-CCO47_RS02695;Parent=gene-CCO47_RS02695;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=CCO47_RS02695;product=DMT family transporter;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 565836 567008 . + . ID=gene-CCO47_RS02700;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=CCO47_RS02700;old_locus_tag=CCO47_02700 NZ_CP075113.1 Protein Homology CDS 565836 567008 . + 0 ID=cds-WP_000673556.1;Parent=gene-CCO47_RS02700;Dbxref=GenBank:WP_000673556.1;Name=WP_000673556.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462212.1;locus_tag=CCO47_RS02700;product=Obg family GTPase CgtA;protein_id=WP_000673556.1;transl_table=11 NZ_CP075113.1 RefSeq gene 567139 568572 . - . ID=gene-CCO47_RS02705;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=CCO47_RS02705;old_locus_tag=CCO47_02705 NZ_CP075113.1 Protein Homology CDS 567139 568572 . - 0 ID=cds-WP_001212681.1;Parent=gene-CCO47_RS02705;Dbxref=GenBank:WP_001212681.1;Name=WP_001212681.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462211.1;locus_tag=CCO47_RS02705;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_001212681.1;transl_table=11 NZ_CP075113.1 RefSeq gene 568820 569296 . + . ID=gene-CCO47_RS02710;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=CCO47_RS02710;old_locus_tag=CCO47_02710 NZ_CP075113.1 Protein Homology CDS 568820 569296 . + 0 ID=cds-WP_001148008.1;Parent=gene-CCO47_RS02710;Dbxref=GenBank:WP_001148008.1;Name=WP_001148008.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=CCO47_RS02710;product=transcription elongation factor GreA;protein_id=WP_001148008.1;transl_table=11 NZ_CP075113.1 RefSeq gene 569452 569745 . - . ID=gene-CCO47_RS02715;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=CCO47_RS02715;old_locus_tag=CCO47_02715 NZ_CP075113.1 Protein Homology CDS 569452 569745 . - 0 ID=cds-WP_001592995.1;Parent=gene-CCO47_RS02715;Dbxref=GenBank:WP_001592995.1;Name=WP_001592995.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=CCO47_RS02715;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001592995.1;transl_table=11 NZ_CP075113.1 RefSeq gene 569872 570498 . + . ID=gene-CCO47_RS02720;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=CCO47_RS02720;old_locus_tag=CCO47_02720 NZ_CP075113.1 Protein Homology CDS 569872 570498 . + 0 ID=cds-WP_000145974.1;Parent=gene-CCO47_RS02720;Dbxref=GenBank:WP_000145974.1;Name=WP_000145974.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462208.1;locus_tag=CCO47_RS02720;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_000145974.1;transl_table=11 NZ_CP075113.1 RefSeq gene 570602 572536 . + . ID=gene-CCO47_RS02725;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=CCO47_RS02725;old_locus_tag=CCO47_02725 NZ_CP075113.1 Protein Homology CDS 570602 572536 . + 0 ID=cds-WP_001107482.1;Parent=gene-CCO47_RS02725;Dbxref=GenBank:WP_001107482.1;Name=WP_001107482.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=CCO47_RS02725;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107482.1;transl_table=11 NZ_CP075113.1 RefSeq gene 572641 573489 . + . ID=gene-CCO47_RS02730;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=CCO47_RS02730;old_locus_tag=CCO47_02730 NZ_CP075113.1 Protein Homology CDS 572641 573489 . + 0 ID=cds-WP_000764713.1;Parent=gene-CCO47_RS02730;Dbxref=GenBank:WP_000764713.1;Name=WP_000764713.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462206.1;locus_tag=CCO47_RS02730;product=dihydropteroate synthase;protein_id=WP_000764713.1;transl_table=11 NZ_CP075113.1 RefSeq gene 573482 574819 . + . ID=gene-CCO47_RS02735;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=CCO47_RS02735;old_locus_tag=CCO47_02735 NZ_CP075113.1 Protein Homology CDS 573482 574819 . + 0 ID=cds-WP_000071169.1;Parent=gene-CCO47_RS02735;Dbxref=GenBank:WP_000071169.1;Name=WP_000071169.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462205.1;locus_tag=CCO47_RS02735;product=phosphoglucosamine mutase;protein_id=WP_000071169.1;transl_table=11 NZ_CP075113.1 RefSeq gene 575042 575374 . + . ID=gene-CCO47_RS02740;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=CCO47_RS02740;old_locus_tag=CCO47_02740 NZ_CP075113.1 Protein Homology CDS 575042 575374 . + 0 ID=cds-WP_000272680.1;Parent=gene-CCO47_RS02740;Dbxref=GenBank:WP_000272680.1;Name=WP_000272680.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=CCO47_RS02740;product=preprotein translocase subunit SecG;protein_id=WP_000272680.1;transl_table=11 NZ_CP075113.1 RefSeq gene 575388 575474 . + . ID=gene-CCO47_RS02745;Name=CCO47_RS02745;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS02745;old_locus_tag=CCO47_02745 NZ_CP075113.1 tRNAscan-SE tRNA 575388 575474 . + . ID=rna-CCO47_RS02745;Parent=gene-CCO47_RS02745;anticodon=(pos:575422..575424);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS02745;product=tRNA-Leu NZ_CP075113.1 tRNAscan-SE exon 575388 575474 . + . ID=exon-CCO47_RS02745-1;Parent=rna-CCO47_RS02745;anticodon=(pos:575422..575424);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS02745;product=tRNA-Leu NZ_CP075113.1 RefSeq gene 575559 576518 . - . ID=gene-CCO47_RS02750;Name=CCO47_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02750;old_locus_tag=CCO47_02750 NZ_CP075113.1 Protein Homology CDS 575559 576518 . - 0 ID=cds-WP_001083598.1;Parent=gene-CCO47_RS02750;Dbxref=GenBank:WP_001083598.1;Name=WP_001083598.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001083598.1;locus_tag=CCO47_RS02750;product=helix-turn-helix domain-containing protein;protein_id=WP_001083598.1;transl_table=11 NZ_CP075113.1 RefSeq gene 576676 578019 . - . ID=gene-CCO47_RS02755;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=CCO47_RS02755;old_locus_tag=CCO47_02755 NZ_CP075113.1 Protein Homology CDS 576676 578019 . - 0 ID=cds-WP_000207644.1;Parent=gene-CCO47_RS02755;Dbxref=GenBank:WP_000207644.1;Name=WP_000207644.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=CCO47_RS02755;product=argininosuccinate synthase;protein_id=WP_000207644.1;transl_table=11 NZ_CP075113.1 RefSeq gene 578363 578439 . + . ID=gene-CCO47_RS02760;Name=CCO47_RS02760;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS02760;old_locus_tag=CCO47_02760 NZ_CP075113.1 tRNAscan-SE tRNA 578363 578439 . + . ID=rna-CCO47_RS02760;Parent=gene-CCO47_RS02760;anticodon=(pos:578397..578399);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS02760;product=tRNA-Met NZ_CP075113.1 tRNAscan-SE exon 578363 578439 . + . ID=exon-CCO47_RS02760-1;Parent=rna-CCO47_RS02760;anticodon=(pos:578397..578399);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS02760;product=tRNA-Met NZ_CP075113.1 RefSeq gene 578647 579099 . + . ID=gene-CCO47_RS02765;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=CCO47_RS02765;old_locus_tag=CCO47_02765 NZ_CP075113.1 Protein Homology CDS 578647 579099 . + 0 ID=cds-WP_000105461.1;Parent=gene-CCO47_RS02765;Dbxref=GenBank:WP_000105461.1;Name=WP_000105461.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=CCO47_RS02765;product=ribosome maturation factor RimP;protein_id=WP_000105461.1;transl_table=11 NZ_CP075113.1 RefSeq gene 579127 580629 . + . ID=gene-CCO47_RS02770;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=CCO47_RS02770;old_locus_tag=CCO47_02770 NZ_CP075113.1 Protein Homology CDS 579127 580629 . + 0 ID=cds-WP_001031038.1;Parent=gene-CCO47_RS02770;Dbxref=GenBank:WP_001031038.1;Name=WP_001031038.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=CCO47_RS02770;product=transcription termination factor NusA;protein_id=WP_001031038.1;transl_table=11 NZ_CP075113.1 RefSeq gene 580654 583332 . + . ID=gene-CCO47_RS02775;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=CCO47_RS02775;old_locus_tag=CCO47_02775 NZ_CP075113.1 Protein Homology CDS 580654 583332 . + 0 ID=cds-WP_000133064.1;Parent=gene-CCO47_RS02775;Dbxref=GenBank:WP_000133064.1;Name=WP_000133064.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=CCO47_RS02775;product=translation initiation factor IF-2;protein_id=WP_000133064.1;transl_table=11 NZ_CP075113.1 RefSeq gene 583553 583954 . + . ID=gene-CCO47_RS02780;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=CCO47_RS02780;old_locus_tag=CCO47_02780 NZ_CP075113.1 Protein Homology CDS 583553 583954 . + 0 ID=cds-WP_001040199.1;Parent=gene-CCO47_RS02780;Dbxref=GenBank:WP_001040199.1;Name=WP_001040199.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=CCO47_RS02780;product=30S ribosome-binding factor RbfA;protein_id=WP_001040199.1;transl_table=11 NZ_CP075113.1 RefSeq gene 583954 584898 . + . ID=gene-CCO47_RS02785;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=CCO47_RS02785;old_locus_tag=CCO47_02785 NZ_CP075113.1 Protein Homology CDS 583954 584898 . + 0 ID=cds-WP_000089671.1;Parent=gene-CCO47_RS02785;Dbxref=GenBank:WP_000089671.1;Name=WP_000089671.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462197.1;locus_tag=CCO47_RS02785;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_000089671.1;transl_table=11 NZ_CP075113.1 RefSeq gene 585049 585318 . + . ID=gene-CCO47_RS02790;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=CCO47_RS02790;old_locus_tag=CCO47_02790 NZ_CP075113.1 Protein Homology CDS 585049 585318 . + 0 ID=cds-WP_000059465.1;Parent=gene-CCO47_RS02790;Dbxref=GenBank:WP_000059465.1;Name=WP_000059465.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=CCO47_RS02790;product=30S ribosomal protein S15;protein_id=WP_000059465.1;transl_table=11 NZ_CP075113.1 RefSeq gene 585560 587695 . + . ID=gene-CCO47_RS02795;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=CCO47_RS02795;old_locus_tag=CCO47_02795 NZ_CP075113.1 Protein Homology CDS 585560 587695 . + 0 ID=cds-WP_001670767.1;Parent=gene-CCO47_RS02795;Dbxref=GenBank:WP_001670767.1;Name=WP_001670767.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=CCO47_RS02795;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001670767.1;transl_table=11 NZ_CP075113.1 RefSeq gene 587805 588689 . + . ID=gene-CCO47_RS02800;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=CCO47_RS02800;old_locus_tag=CCO47_02800 NZ_CP075113.1 Protein Homology CDS 587805 588689 . + 0 ID=cds-WP_000802069.1;Parent=gene-CCO47_RS02800;Dbxref=GenBank:WP_000802069.1;Name=WP_000802069.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=CCO47_RS02800;product=lipoprotein NlpI;protein_id=WP_000802069.1;transl_table=11 NZ_CP075113.1 RefSeq gene 588795 588875 . + . ID=gene-CCO47_RS02805;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=CCO47_RS02805;old_locus_tag=CCO47_02805 NZ_CP075113.1 Protein Homology CDS 588795 588875 . + 0 ID=cds-WP_010723222.1;Parent=gene-CCO47_RS02805;Dbxref=GenBank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=CCO47_RS02805;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11 NZ_CP075113.1 RefSeq gene 588868 590757 . + . ID=gene-CCO47_RS02810;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=CCO47_RS02810;old_locus_tag=CCO47_02810 NZ_CP075113.1 Protein Homology CDS 588868 590757 . + 0 ID=cds-WP_000807253.1;Parent=gene-CCO47_RS02810;Dbxref=GenBank:WP_000807253.1;Name=WP_000807253.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312070.2;locus_tag=CCO47_RS02810;product=ATP-dependent RNA helicase DeaD;protein_id=WP_000807253.1;transl_table=11 NZ_CP075113.1 RefSeq gene 590911 592155 . + . ID=gene-CCO47_RS02815;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=CCO47_RS02815;old_locus_tag=CCO47_02815 NZ_CP075113.1 Protein Homology CDS 590911 592155 . + 0 ID=cds-WP_000224370.1;Parent=gene-CCO47_RS02815;Dbxref=GenBank:WP_000224370.1;Name=WP_000224370.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462192.1;locus_tag=CCO47_RS02815;product=tryptophan permease;protein_id=WP_000224370.1;transl_table=11 NZ_CP075113.1 RefSeq gene 592216 592746 . - . ID=gene-CCO47_RS02820;Name=CCO47_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02820;old_locus_tag=CCO47_02820 NZ_CP075113.1 Protein Homology CDS 592216 592746 . - 0 ID=cds-WP_001294025.1;Parent=gene-CCO47_RS02820;Dbxref=GenBank:WP_001294025.1;Name=WP_001294025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462191.1;locus_tag=CCO47_RS02820;product=hypothetical protein;protein_id=WP_001294025.1;transl_table=11 NZ_CP075113.1 RefSeq gene 592905 593624 . + . ID=gene-CCO47_RS02825;Name=CCO47_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02825;old_locus_tag=CCO47_02825 NZ_CP075113.1 Protein Homology CDS 592905 593624 . + 0 ID=cds-WP_000532744.1;Parent=gene-CCO47_RS02825;Dbxref=GenBank:WP_000532744.1;Name=WP_000532744.1;Ontology_term=GO:0018104,GO:0071972;gbkey=CDS;go_function=peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462190.1;locus_tag=CCO47_RS02825;product=L%2CD-transpeptidase family protein;protein_id=WP_000532744.1;transl_table=11 NZ_CP075113.1 RefSeq gene 593602 594609 . - . ID=gene-CCO47_RS02830;Name=CCO47_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02830;old_locus_tag=CCO47_02830 NZ_CP075113.1 Protein Homology CDS 593602 594609 . - 0 ID=cds-WP_000130438.1;Parent=gene-CCO47_RS02830;Dbxref=GenBank:WP_000130438.1;Name=WP_000130438.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462189.1;locus_tag=CCO47_RS02830;product=luciferase-like monooxygenase;protein_id=WP_000130438.1;transl_table=11 NZ_CP075113.1 RefSeq gene 594787 595665 . - . ID=gene-CCO47_RS02835;Name=CCO47_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02835;old_locus_tag=CCO47_02835 NZ_CP075113.1 Protein Homology CDS 594787 595665 . - 0 ID=cds-WP_000877720.1;Parent=gene-CCO47_RS02835;Dbxref=GenBank:WP_000877720.1;Name=WP_000877720.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312067.2;locus_tag=CCO47_RS02835;product=U32 family peptidase;protein_id=WP_000877720.1;transl_table=11 NZ_CP075113.1 RefSeq gene 595674 596669 . - . ID=gene-CCO47_RS02840;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=CCO47_RS02840;old_locus_tag=CCO47_02840 NZ_CP075113.1 Protein Homology CDS 595674 596669 . - 0 ID=cds-WP_000421309.1;Parent=gene-CCO47_RS02840;Dbxref=GenBank:WP_000421309.1;Name=WP_000421309.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=CCO47_RS02840;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_000421309.1;transl_table=11 NZ_CP075113.1 RefSeq gene 596886 597410 . + . ID=gene-CCO47_RS02845;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=CCO47_RS02845;old_locus_tag=CCO47_02845 NZ_CP075113.1 Protein Homology CDS 596886 597410 . + 0 ID=cds-WP_000884721.1;Parent=gene-CCO47_RS02845;Dbxref=GenBank:WP_000884721.1;Name=WP_000884721.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462186.1;locus_tag=CCO47_RS02845;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_000884721.1;transl_table=11 NZ_CP075113.1 RefSeq gene 597404 597907 . + . ID=gene-CCO47_RS02850;Name=CCO47_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02850;old_locus_tag=CCO47_02850 NZ_CP075113.1 Protein Homology CDS 597404 597907 . + 0 ID=cds-WP_000908562.1;Parent=gene-CCO47_RS02850;Dbxref=GenBank:WP_000908562.1;Name=WP_000908562.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462185.1;locus_tag=CCO47_RS02850;product=GNAT family N-acetyltransferase;protein_id=WP_000908562.1;transl_table=11 NZ_CP075113.1 RefSeq gene 597894 598211 . - . ID=gene-CCO47_RS02855;Name=CCO47_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02855;old_locus_tag=CCO47_02855 NZ_CP075113.1 Protein Homology CDS 597894 598211 . - 0 ID=cds-WP_000928383.1;Parent=gene-CCO47_RS02855;Dbxref=GenBank:WP_000928383.1;Name=WP_000928383.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462184.3;locus_tag=CCO47_RS02855;product=GIY-YIG nuclease family protein;protein_id=WP_000928383.1;transl_table=11 NZ_CP075113.1 RefSeq gene 598249 598692 . + . ID=gene-CCO47_RS02860;Name=CCO47_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02860;old_locus_tag=CCO47_02860 NZ_CP075113.1 Protein Homology CDS 598249 598692 . + 0 ID=cds-WP_000380404.1;Parent=gene-CCO47_RS02860;Dbxref=GenBank:WP_000380404.1;Name=WP_000380404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462183.1;locus_tag=CCO47_RS02860;product=YhbP family protein;protein_id=WP_000380404.1;transl_table=11 NZ_CP075113.1 RefSeq gene 598672 599190 . - . ID=gene-CCO47_RS02865;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=CCO47_RS02865;old_locus_tag=CCO47_02865 NZ_CP075113.1 Protein Homology CDS 598672 599190 . - 0 ID=cds-WP_000037599.1;Parent=gene-CCO47_RS02865;Dbxref=GenBank:WP_000037599.1;Name=WP_000037599.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462182.1;locus_tag=CCO47_RS02865;product=protein/nucleic acid deglycase;protein_id=WP_000037599.1;transl_table=11 NZ_CP075113.1 RefSeq gene 599321 599956 . + . ID=gene-CCO47_RS02870;Name=CCO47_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02870;old_locus_tag=CCO47_02870 NZ_CP075113.1 Protein Homology CDS 599321 599956 . + 0 ID=cds-WP_001530791.1;Parent=gene-CCO47_RS02870;Dbxref=GenBank:WP_001530791.1;Name=WP_001530791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312060.2;locus_tag=CCO47_RS02870;product=NAD(P)H-binding protein;protein_id=WP_001530791.1;transl_table=11 NZ_CP075113.1 RefSeq gene 600023 600598 . - . ID=gene-CCO47_RS02875;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=CCO47_RS02875;old_locus_tag=CCO47_02875 NZ_CP075113.1 Protein Homology CDS 600023 600598 . - 0 ID=cds-WP_000643280.1;Parent=gene-CCO47_RS02875;Dbxref=GenBank:WP_000643280.1;Name=WP_000643280.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462180.1;locus_tag=CCO47_RS02875;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_000643280.1;transl_table=11 NZ_CP075113.1 RefSeq gene 600608 601198 . - . ID=gene-CCO47_RS02880;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=CCO47_RS02880;old_locus_tag=CCO47_02880 NZ_CP075113.1 Protein Homology CDS 600608 601198 . - 0 ID=cds-WP_000893481.1;Parent=gene-CCO47_RS02880;Dbxref=GenBank:WP_000893481.1;Name=WP_000893481.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462179.1;locus_tag=CCO47_RS02880;product=DnaA initiator-associating protein DiaA;protein_id=WP_000893481.1;transl_table=11 NZ_CP075113.1 RefSeq gene 601220 601615 . - . ID=gene-CCO47_RS02885;Name=CCO47_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02885;old_locus_tag=CCO47_02885 NZ_CP075113.1 Protein Homology CDS 601220 601615 . - 0 ID=cds-WP_000057285.1;Parent=gene-CCO47_RS02885;Dbxref=GenBank:WP_000057285.1;Name=WP_000057285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462178.1;locus_tag=CCO47_RS02885;product=YraN family protein;protein_id=WP_000057285.1;transl_table=11 NZ_CP075113.1 RefSeq gene 601573 603615 . - . ID=gene-CCO47_RS02890;Name=CCO47_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02890;old_locus_tag=CCO47_02890 NZ_CP075113.1 Protein Homology CDS 601573 603615 . - 0 ID=cds-WP_000249224.1;Parent=gene-CCO47_RS02890;Dbxref=GenBank:WP_000249224.1;Name=WP_000249224.1;Ontology_term=GO:0008360,GO:0009252,GO:0004553,GO:0019899,GO:0030234;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,enzyme binding|0019899||IEA,enzyme regulator activity|0030234||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=CCO47_RS02890;product=penicillin-binding protein activator;protein_id=WP_000249224.1;transl_table=11 NZ_CP075113.1 RefSeq gene 603679 604542 . + . ID=gene-CCO47_RS02895;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=CCO47_RS02895;old_locus_tag=CCO47_02895 NZ_CP075113.1 Protein Homology CDS 603679 604542 . + 0 ID=cds-WP_000812295.1;Parent=gene-CCO47_RS02895;Dbxref=GenBank:WP_000812295.1;Name=WP_000812295.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=CCO47_RS02895;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_000812295.1;transl_table=11 NZ_CP075113.1 RefSeq gene 604700 605473 . - . ID=gene-CCO47_RS02900;Name=CCO47_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02900;old_locus_tag=CCO47_02900 NZ_CP075113.1 Protein Homology CDS 604700 605473 . - 0 ID=cds-WP_001083896.1;Parent=gene-CCO47_RS02900;Dbxref=GenBank:WP_001083896.1;Name=WP_001083896.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462175.1;locus_tag=CCO47_RS02900;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001083896.1;transl_table=11 NZ_CP075113.1 RefSeq gene 605584 606627 . - . ID=gene-CCO47_RS02905;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=CCO47_RS02905;old_locus_tag=CCO47_02905 NZ_CP075113.1 Protein Homology CDS 605584 606627 . - 0 ID=cds-WP_000844176.1;Parent=gene-CCO47_RS02905;Dbxref=GenBank:WP_000844176.1;Name=WP_000844176.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=CCO47_RS02905;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_000844176.1;transl_table=11 NZ_CP075113.1 RefSeq gene 606671 608044 . - . ID=gene-CCO47_RS02910;Name=CCO47_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02910;old_locus_tag=CCO47_02910 NZ_CP075113.1 Protein Homology CDS 606671 608044 . - 0 ID=cds-WP_000490603.1;Parent=gene-CCO47_RS02910;Dbxref=GenBank:WP_000490603.1;Name=WP_000490603.1;Ontology_term=GO:0009401,GO:0015796,GO:0015577,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=galactitol transmembrane transporter activity|0015577||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,galactitol transmembrane transport|0015796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=CCO47_RS02910;product=galactitol-specific PTS transporter subunit IIC;protein_id=WP_000490603.1;transl_table=11 NZ_CP075113.1 RefSeq gene 608048 608332 . - . ID=gene-CCO47_RS02915;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=CCO47_RS02915;old_locus_tag=CCO47_02915 NZ_CP075113.1 Protein Homology CDS 608048 608332 . - 0 ID=cds-WP_000824293.1;Parent=gene-CCO47_RS02915;Dbxref=GenBank:WP_000824293.1;Name=WP_000824293.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462172.1;locus_tag=CCO47_RS02915;product=PTS galactitol transporter subunit IIB;protein_id=WP_000824293.1;transl_table=11 NZ_CP075113.1 RefSeq gene 608363 608827 . - . ID=gene-CCO47_RS02920;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=CCO47_RS02920;old_locus_tag=CCO47_02920 NZ_CP075113.1 Protein Homology CDS 608363 608827 . - 0 ID=cds-WP_000080445.1;Parent=gene-CCO47_RS02920;Dbxref=GenBank:WP_000080445.1;Name=WP_000080445.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462171.1;locus_tag=CCO47_RS02920;product=PTS galactitol transporter subunit IIA;protein_id=WP_000080445.1;transl_table=11 NZ_CP075113.1 RefSeq gene 608842 610113 . - . ID=gene-CCO47_RS02925;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=CCO47_RS02925;old_locus_tag=CCO47_02925 NZ_CP075113.1 Protein Homology CDS 608842 610113 . - 0 ID=cds-WP_001675498.1;Parent=gene-CCO47_RS02925;Dbxref=GenBank:WP_001675498.1;Name=WP_001675498.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=CCO47_RS02925;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WP_001675498.1;transl_table=11 NZ_CP075113.1 RefSeq gene 610233 611087 . - . ID=gene-CCO47_RS02930;Name=CCO47_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02930;old_locus_tag=CCO47_02930 NZ_CP075113.1 Protein Homology CDS 610233 611087 . - 0 ID=cds-WP_000469979.1;Parent=gene-CCO47_RS02930;Dbxref=GenBank:WP_000469979.1;Name=WP_000469979.1;Ontology_term=GO:0005975,GO:0008270,GO:0009025;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462166.1;locus_tag=CCO47_RS02930;product=tagatose bisphosphate family class II aldolase;protein_id=WP_000469979.1;transl_table=11 NZ_CP075113.1 RefSeq gene 611345 612916 . - . ID=gene-CCO47_RS02935;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=CCO47_RS02935;old_locus_tag=CCO47_02935 NZ_CP075113.1 Protein Homology CDS 611345 612916 . - 0 ID=cds-WP_001273723.1;Parent=gene-CCO47_RS02935;Dbxref=GenBank:WP_001273723.1;Name=WP_001273723.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462163.1;locus_tag=CCO47_RS02935;product=galactarate dehydratase;protein_id=WP_001273723.1;transl_table=11 NZ_CP075113.1 RefSeq gene 613446 614216 . + . ID=gene-CCO47_RS02940;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=CCO47_RS02940;old_locus_tag=CCO47_02940 NZ_CP075113.1 Protein Homology CDS 613446 614216 . + 0 ID=cds-WP_001057715.1;Parent=gene-CCO47_RS02940;Dbxref=GenBank:WP_001057715.1;Name=WP_001057715.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462162.1;locus_tag=CCO47_RS02940;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_001057715.1;transl_table=11 NZ_CP075113.1 RefSeq gene 614242 615132 . + . ID=gene-CCO47_RS02945;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=CCO47_RS02945;old_locus_tag=CCO47_02945 NZ_CP075113.1 Protein Homology CDS 614242 615132 . + 0 ID=cds-WP_000178106.1;Parent=gene-CCO47_RS02945;Dbxref=GenBank:WP_000178106.1;Name=WP_000178106.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=CCO47_RS02945;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000178106.1;transl_table=11 NZ_CP075113.1 RefSeq gene 615230 616375 . + . ID=gene-CCO47_RS02950;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=CCO47_RS02950;old_locus_tag=CCO47_02950 NZ_CP075113.1 Protein Homology CDS 615230 616375 . + 0 ID=cds-WP_000706458.1;Parent=gene-CCO47_RS02950;Dbxref=GenBank:WP_000706458.1;Name=WP_000706458.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462160.1;locus_tag=CCO47_RS02950;product=glycerate 2-kinase;protein_id=WP_000706458.1;transl_table=11 NZ_CP075113.1 RefSeq gene 616408 616782 . + . ID=gene-CCO47_RS02955;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=CCO47_RS02955;old_locus_tag=CCO47_02955 NZ_CP075113.1 cmsearch RNase_P_RNA 616408 616782 . + . ID=rna-CCO47_RS02955;Parent=gene-CCO47_RS02955;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS02955;product=RNase P RNA component class A NZ_CP075113.1 cmsearch exon 616408 616782 . + . ID=exon-CCO47_RS02955-1;Parent=rna-CCO47_RS02955;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS02955;product=RNase P RNA component class A NZ_CP075113.1 RefSeq gene 617602 618540 . + . ID=gene-CCO47_RS02960;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=CCO47_RS02960;old_locus_tag=CCO47_02960 NZ_CP075113.1 Protein Homology CDS 617602 618540 . + 0 ID=cds-WP_001094901.1;Parent=gene-CCO47_RS02960;Dbxref=GenBank:WP_001094901.1;Name=WP_001094901.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462159.1;locus_tag=CCO47_RS02960;product=transcriptional regulator TdcA;protein_id=WP_001094901.1;transl_table=11 NZ_CP075113.1 RefSeq gene 618638 619627 . + . ID=gene-CCO47_RS02965;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=CCO47_RS02965;old_locus_tag=CCO47_02965 NZ_CP075113.1 Protein Homology CDS 618638 619627 . + 0 ID=cds-WP_000548368.1;Parent=gene-CCO47_RS02965;Dbxref=GenBank:WP_000548368.1;Name=WP_000548368.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462158.1;locus_tag=CCO47_RS02965;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_000548368.1;transl_table=11 NZ_CP075113.1 RefSeq gene 619648 620979 . + . ID=gene-CCO47_RS02970;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=CCO47_RS02970;old_locus_tag=CCO47_02970 NZ_CP075113.1 Protein Homology CDS 619648 620979 . + 0 ID=cds-WP_000108129.1;Parent=gene-CCO47_RS02970;Dbxref=GenBank:WP_000108129.1;Name=WP_000108129.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=CCO47_RS02970;product=threonine/serine transporter TdcC;protein_id=WP_000108129.1;transl_table=11 NZ_CP075113.1 RefSeq gene 621046 622254 . + . ID=gene-CCO47_RS02975;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=CCO47_RS02975;old_locus_tag=CCO47_02975 NZ_CP075113.1 Protein Homology CDS 621046 622254 . + 0 ID=cds-WP_001001845.1;Parent=gene-CCO47_RS02975;Dbxref=GenBank:WP_001001845.1;Name=WP_001001845.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462156.1;locus_tag=CCO47_RS02975;product=propionate kinase;protein_id=WP_001001845.1;transl_table=11 NZ_CP075113.1 RefSeq gene 622288 624582 . + . ID=gene-CCO47_RS02980;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=CCO47_RS02980;old_locus_tag=CCO47_02980 NZ_CP075113.1 Protein Homology CDS 622288 624582 . + 0 ID=cds-WP_001265608.1;Parent=gene-CCO47_RS02980;Dbxref=GenBank:WP_001265608.1;Name=WP_001265608.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462155.1;locus_tag=CCO47_RS02980;product=formate C-acetyltransferase;protein_id=WP_001265608.1;transl_table=11 NZ_CP075113.1 RefSeq gene 624652 626016 . + . ID=gene-CCO47_RS02985;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=CCO47_RS02985;old_locus_tag=CCO47_02985 NZ_CP075113.1 Protein Homology CDS 624652 626016 . + 0 ID=cds-WP_000622075.1;Parent=gene-CCO47_RS02985;Dbxref=GenBank:WP_000622075.1;Name=WP_000622075.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462154.1;locus_tag=CCO47_RS02985;product=L-serine ammonia-lyase;protein_id=WP_000622075.1;transl_table=11 NZ_CP075113.1 RefSeq gene 626331 627662 . + . ID=gene-CCO47_RS02990;Name=CCO47_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02990;old_locus_tag=CCO47_02990 NZ_CP075113.1 Protein Homology CDS 626331 627662 . + 0 ID=cds-WP_000443188.1;Parent=gene-CCO47_RS02990;Dbxref=GenBank:WP_000443188.1;Name=WP_000443188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=CCO47_RS02990;product=SLC5/6 family protein;protein_id=WP_000443188.1;transl_table=11 NZ_CP075113.1 RefSeq gene 627688 628998 . + . ID=gene-CCO47_RS02995;Name=CCO47_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS02995;old_locus_tag=CCO47_02995 NZ_CP075113.1 Protein Homology CDS 627688 628998 . + 0 ID=cds-WP_000463074.1;Parent=gene-CCO47_RS02995;Dbxref=GenBank:WP_000463074.1;Name=WP_000463074.1;Ontology_term=GO:0051539,GO:0080146;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,L-cysteine desulfhydrase activity|0080146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462152.1;locus_tag=CCO47_RS02995;product=L-cysteine desulfidase family protein;protein_id=WP_000463074.1;transl_table=11 NZ_CP075113.1 RefSeq gene 629111 629275 . - . ID=gene-CCO47_RS03000;Name=CCO47_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03000;old_locus_tag=CCO47_03000 NZ_CP075113.1 Protein Homology CDS 629111 629275 . - 0 ID=cds-WP_000039327.1;Parent=gene-CCO47_RS03000;Dbxref=GenBank:WP_000039327.1;Name=WP_000039327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462151.1;locus_tag=CCO47_RS03000;product=hypothetical protein;protein_id=WP_000039327.1;transl_table=11 NZ_CP075113.1 RefSeq gene 629299 630000 . - . ID=gene-CCO47_RS03005;Name=CCO47_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03005;old_locus_tag=CCO47_03005 NZ_CP075113.1 Protein Homology CDS 629299 630000 . - 0 ID=cds-WP_000633552.1;Parent=gene-CCO47_RS03005;Dbxref=GenBank:WP_000633552.1;Name=WP_000633552.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462150.1;locus_tag=CCO47_RS03005;product=pirin family protein;protein_id=WP_000633552.1;transl_table=11 NZ_CP075113.1 RefSeq gene 630105 631001 . + . ID=gene-CCO47_RS03010;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=CCO47_RS03010;old_locus_tag=CCO47_03010 NZ_CP075113.1 Protein Homology CDS 630105 631001 . + 0 ID=cds-WP_001041023.1;Parent=gene-CCO47_RS03010;Dbxref=GenBank:WP_001041023.1;Name=WP_001041023.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462149.1;locus_tag=CCO47_RS03010;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_001041023.1;transl_table=11 NZ_CP075113.1 RefSeq gene 631040 631405 . - . ID=gene-CCO47_RS03015;Name=CCO47_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03015;old_locus_tag=CCO47_03015 NZ_CP075113.1 Protein Homology CDS 631040 631405 . - 0 ID=cds-WP_000384136.1;Parent=gene-CCO47_RS03015;Dbxref=GenBank:WP_000384136.1;Name=WP_000384136.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462148.1;locus_tag=CCO47_RS03015;product=DUF805 domain-containing protein;protein_id=WP_000384136.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 631529 632514 . - . ID=gene-CCO47_RS03020;Name=CCO47_RS03020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS03020;old_locus_tag=CCO47_03020;pseudo=true NZ_CP075113.1 Protein Homology CDS 631529 632514 . - 0 ID=cds-CCO47_RS03020;Parent=gene-CCO47_RS03020;Note=frameshifted;Ontology_term=GO:0004364,GO:0016491;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462147.1;locus_tag=CCO47_RS03020;product=glutathione S-transferase family protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 632582 632974 . - . ID=gene-CCO47_RS03025;Name=CCO47_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03025;old_locus_tag=CCO47_03025 NZ_CP075113.1 Protein Homology CDS 632582 632974 . - 0 ID=cds-WP_001675506.1;Parent=gene-CCO47_RS03025;Dbxref=GenBank:WP_001675506.1;Name=WP_001675506.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=CCO47_RS03025;product=DoxX family protein;protein_id=WP_001675506.1;transl_table=11 NZ_CP075113.1 RefSeq gene 633222 633521 . - . ID=gene-CCO47_RS03030;Name=CCO47_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03030;old_locus_tag=CCO47_03030 NZ_CP075113.1 Protein Homology CDS 633222 633521 . - 0 ID=cds-WP_000095496.1;Parent=gene-CCO47_RS03030;Dbxref=GenBank:WP_000095496.1;Name=WP_000095496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462145.1;locus_tag=CCO47_RS03030;product=YqjK-like family protein;protein_id=WP_000095496.1;transl_table=11 NZ_CP075113.1 RefSeq gene 633518 633916 . - . ID=gene-CCO47_RS03035;Name=CCO47_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03035;old_locus_tag=CCO47_03035 NZ_CP075113.1 Protein Homology CDS 633518 633916 . - 0 ID=cds-WP_000785626.1;Parent=gene-CCO47_RS03035;Dbxref=GenBank:WP_000785626.1;Name=WP_000785626.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462144.1;locus_tag=CCO47_RS03035;product=phage holin family protein;protein_id=WP_000785626.1;transl_table=11 NZ_CP075113.1 RefSeq gene 633919 634224 . - . ID=gene-CCO47_RS03040;Name=CCO47_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03040;old_locus_tag=CCO47_03040 NZ_CP075113.1 Protein Homology CDS 633919 634224 . - 0 ID=cds-WP_000031219.1;Parent=gene-CCO47_RS03040;Dbxref=GenBank:WP_000031219.1;Name=WP_000031219.1;Ontology_term=GO:0043022,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462143.1;locus_tag=CCO47_RS03040;product=ElaB/YgaM/YqjD family protein;protein_id=WP_000031219.1;transl_table=11 NZ_CP075113.1 RefSeq gene 634266 634634 . - . ID=gene-CCO47_RS03045;Name=CCO47_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03045;old_locus_tag=CCO47_03045 NZ_CP075113.1 Protein Homology CDS 634266 634634 . - 0 ID=cds-WP_000877297.1;Parent=gene-CCO47_RS03045;Dbxref=GenBank:WP_000877297.1;Name=WP_000877297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462142.1;locus_tag=CCO47_RS03045;product=DUF1090 domain-containing protein;protein_id=WP_000877297.1;transl_table=11 NZ_CP075113.1 RefSeq gene 634779 635162 . - . ID=gene-CCO47_RS03050;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=CCO47_RS03050;old_locus_tag=CCO47_03050 NZ_CP075113.1 Protein Homology CDS 634779 635162 . - 0 ID=cds-WP_000917516.1;Parent=gene-CCO47_RS03050;Dbxref=GenBank:WP_000917516.1;Name=WP_000917516.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462141.1;locus_tag=CCO47_RS03050;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_000917516.1;transl_table=11 NZ_CP075113.1 RefSeq gene 635166 635828 . - . ID=gene-CCO47_RS03055;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=CCO47_RS03055;old_locus_tag=CCO47_03055 NZ_CP075113.1 Protein Homology CDS 635166 635828 . - 0 ID=cds-WP_000422141.1;Parent=gene-CCO47_RS03055;Dbxref=GenBank:WP_000422141.1;Name=WP_000422141.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462140.1;locus_tag=CCO47_RS03055;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_000422141.1;transl_table=11 NZ_CP075113.1 RefSeq gene 636278 637522 . - . ID=gene-CCO47_RS03060;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=CCO47_RS03060;old_locus_tag=CCO47_03060 NZ_CP075113.1 Protein Homology CDS 636278 637522 . - 0 ID=cds-WP_000235358.1;Parent=gene-CCO47_RS03060;Dbxref=GenBank:WP_000235358.1;Name=WP_000235358.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462139.1;locus_tag=CCO47_RS03060;product=serine/threonine transporter SstT;protein_id=WP_000235358.1;transl_table=11 NZ_CP075113.1 RefSeq gene 637777 638745 . - . ID=gene-CCO47_RS03065;Name=CCO47_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03065;old_locus_tag=CCO47_03065 NZ_CP075113.1 Protein Homology CDS 637777 638745 . - 0 ID=cds-WP_001098833.1;Parent=gene-CCO47_RS03065;Dbxref=GenBank:WP_001098833.1;Name=WP_001098833.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462138.1;locus_tag=CCO47_RS03065;product=TerC family protein;protein_id=WP_001098833.1;transl_table=11 NZ_CP075113.1 RefSeq gene 639016 640014 . - . ID=gene-CCO47_RS03070;Name=CCO47_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03070;old_locus_tag=CCO47_03070 NZ_CP075113.1 Protein Homology CDS 639016 640014 . - 0 ID=cds-WP_000617684.1;Parent=gene-CCO47_RS03070;Dbxref=GenBank:WP_000617684.1;Name=WP_000617684.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=CCO47_RS03070;product=Gfo/Idh/MocA family protein;protein_id=WP_000617684.1;transl_table=11 NZ_CP075113.1 RefSeq gene 640103 640795 . - . ID=gene-CCO47_RS03075;Name=CCO47_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03075;old_locus_tag=CCO47_03075 NZ_CP075113.1 Protein Homology CDS 640103 640795 . - 0 ID=cds-WP_000951045.1;Parent=gene-CCO47_RS03075;Dbxref=GenBank:WP_000951045.1;Name=WP_000951045.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462136.1;locus_tag=CCO47_RS03075;product=SanA/YdcF family protein;protein_id=WP_000951045.1;transl_table=11 NZ_CP075113.1 RefSeq gene 640947 641444 . - . ID=gene-CCO47_RS03080;Name=CCO47_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03080;old_locus_tag=CCO47_03080 NZ_CP075113.1 Protein Homology CDS 640947 641444 . - 0 ID=cds-WP_000202966.1;Parent=gene-CCO47_RS03080;Dbxref=GenBank:WP_000202966.1;Name=WP_000202966.1;Ontology_term=GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462135.1;locus_tag=CCO47_RS03080;product=M48 metallopeptidase family protein;protein_id=WP_000202966.1;transl_table=11 NZ_CP075113.1 RefSeq gene 641530 642666 . + . ID=gene-CCO47_RS03085;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=CCO47_RS03085;old_locus_tag=CCO47_03085 NZ_CP075113.1 Protein Homology CDS 641530 642666 . + 0 ID=cds-WP_000019988.1;Parent=gene-CCO47_RS03085;Dbxref=GenBank:WP_000019988.1;Name=WP_000019988.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=CCO47_RS03085;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_000019988.1;transl_table=11 NZ_CP075113.1 RefSeq gene 642747 644765 . - . ID=gene-CCO47_RS03090;Name=CCO47_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03090;old_locus_tag=CCO47_03090 NZ_CP075113.1 Protein Homology CDS 642747 644765 . - 0 ID=cds-WP_000121528.1;Parent=gene-CCO47_RS03090;Dbxref=GenBank:WP_000121528.1;Name=WP_000121528.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=CCO47_RS03090;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_000121528.1;transl_table=11 NZ_CP075113.1 RefSeq gene 644936 646315 . - . ID=gene-CCO47_RS03095;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=CCO47_RS03095;old_locus_tag=CCO47_03095 NZ_CP075113.1 Protein Homology CDS 644936 646315 . - 0 ID=cds-WP_001576371.1;Parent=gene-CCO47_RS03095;Dbxref=GenBank:WP_001576371.1;Name=WP_001576371.1;Ontology_term=GO:0009447,GO:0030170,GO:0033094;gbkey=CDS;gene=ygjG;go_function=pyridoxal phosphate binding|0030170||IEA,putrescine--2-oxoglutarate transaminase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894971.1;locus_tag=CCO47_RS03095;product=putrescine aminotransferase;protein_id=WP_001576371.1;transl_table=11 NZ_CP075113.1 RefSeq gene 646744 648264 . + . ID=gene-CCO47_RS03100;Name=CCO47_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03100;old_locus_tag=CCO47_03100 NZ_CP075113.1 Protein Homology CDS 646744 648264 . + 0 ID=cds-WP_000094642.1;Parent=gene-CCO47_RS03100;Dbxref=GenBank:WP_000094642.1;Name=WP_000094642.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462131.1;locus_tag=CCO47_RS03100;product=methyl-accepting chemotaxis protein;protein_id=WP_000094642.1;transl_table=11 NZ_CP075113.1 RefSeq gene 648652 650220 . + . ID=gene-CCO47_RS03105;Name=CCO47_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03105;old_locus_tag=CCO47_03105 NZ_CP075113.1 Protein Homology CDS 648652 650220 . + 0 ID=cds-WP_000478462.1;Parent=gene-CCO47_RS03105;Dbxref=GenBank:WP_000478462.1;Name=WP_000478462.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462130.1;locus_tag=CCO47_RS03105;product=methyl-accepting chemotaxis protein;protein_id=WP_000478462.1;transl_table=11 NZ_CP075113.1 RefSeq gene 650217 650864 . - . ID=gene-CCO47_RS03110;Name=CCO47_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03110;old_locus_tag=CCO47_03110 NZ_CP075113.1 Protein Homology CDS 650217 650864 . - 0 ID=cds-WP_000983441.1;Parent=gene-CCO47_RS03110;Dbxref=GenBank:WP_000983441.1;Name=WP_000983441.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=CCO47_RS03110;product=PadR family transcriptional regulator;protein_id=WP_000983441.1;transl_table=11 NZ_CP075113.1 RefSeq gene 651096 651863 . + . ID=gene-CCO47_RS03115;Name=CCO47_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03115;old_locus_tag=CCO47_03115 NZ_CP075113.1 Protein Homology CDS 651096 651863 . + 0 ID=cds-WP_000213760.1;Parent=gene-CCO47_RS03115;Dbxref=GenBank:WP_000213760.1;Name=WP_000213760.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462128.1;locus_tag=CCO47_RS03115;product=siderophore-interacting protein;protein_id=WP_000213760.1;transl_table=11 NZ_CP075113.1 RefSeq gene 651943 652018 . - . ID=gene-CCO47_RS03120;Name=CCO47_RS03120;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS03120;old_locus_tag=CCO47_03120 NZ_CP075113.1 tRNAscan-SE tRNA 651943 652018 . - . ID=rna-CCO47_RS03120;Parent=gene-CCO47_RS03120;anticodon=(pos:complement(651983..651985));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS03120;product=tRNA-Ile NZ_CP075113.1 tRNAscan-SE exon 651943 652018 . - . ID=exon-CCO47_RS03120-1;Parent=rna-CCO47_RS03120;anticodon=(pos:complement(651983..651985));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS03120;product=tRNA-Ile NZ_CP075113.1 RefSeq gene 652144 652650 . + . ID=gene-CCO47_RS03125;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=CCO47_RS03125;old_locus_tag=CCO47_03125 NZ_CP075113.1 Protein Homology CDS 652144 652650 . + 0 ID=cds-WP_000237777.1;Parent=gene-CCO47_RS03125;Dbxref=GenBank:WP_000237777.1;Name=WP_000237777.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462127.1;locus_tag=CCO47_RS03125;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000237777.1;transl_table=11 NZ_CP075113.1 RefSeq gene 652774 654621 . - . ID=gene-CCO47_RS03130;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=CCO47_RS03130;old_locus_tag=CCO47_03130 NZ_CP075113.1 Protein Homology CDS 652774 654621 . - 0 ID=cds-WP_001519776.1;Parent=gene-CCO47_RS03130;Dbxref=GenBank:WP_001519776.1;Name=WP_001519776.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311977.1;locus_tag=CCO47_RS03130;product=RNA polymerase sigma factor RpoD;protein_id=WP_001519776.1;transl_table=11 NZ_CP075113.1 RefSeq gene 654771 656516 . - . ID=gene-CCO47_RS03135;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=CCO47_RS03135;old_locus_tag=CCO47_03135 NZ_CP075113.1 Protein Homology CDS 654771 656516 . - 0 ID=cds-WP_000918859.1;Parent=gene-CCO47_RS03135;Dbxref=GenBank:WP_000918859.1;Name=WP_000918859.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462125.1;locus_tag=CCO47_RS03135;product=DNA primase;protein_id=WP_000918859.1;transl_table=11 NZ_CP075113.1 RefSeq gene 656751 656966 . - . ID=gene-CCO47_RS03140;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=CCO47_RS03140;old_locus_tag=CCO47_03140 NZ_CP075113.1 Protein Homology CDS 656751 656966 . - 0 ID=cds-WP_001144069.1;Parent=gene-CCO47_RS03140;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=CCO47_RS03140;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_CP075113.1 RefSeq gene 657194 658207 . + . ID=gene-CCO47_RS03145;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=CCO47_RS03145;old_locus_tag=CCO47_03145 NZ_CP075113.1 Protein Homology CDS 657194 658207 . + 0 ID=cds-WP_001264394.1;Parent=gene-CCO47_RS03145;Dbxref=GenBank:WP_001264394.1;Name=WP_001264394.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=CCO47_RS03145;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_001264394.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 658330 658473 . - . ID=gene-CCO47_RS03155;Name=CCO47_RS03155;end_range=658473,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS03155;old_locus_tag=CCO47_03155;partial=true;pseudo=true;start_range=.,658330 NZ_CP075113.1 Protein Homology CDS 658330 658473 . - 0 ID=cds-CCO47_RS03155;Parent=gene-CCO47_RS03155;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016829;end_range=658473,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311971.1;locus_tag=CCO47_RS03155;partial=true;product=fumarate hydratase;pseudo=true;start_range=.,658330;transl_table=11 NZ_CP075113.1 RefSeq gene 658457 659068 . - . ID=gene-CCO47_RS03160;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=CCO47_RS03160;old_locus_tag=CCO47_03160 NZ_CP075113.1 Protein Homology CDS 658457 659068 . - 0 ID=cds-WP_001272784.1;Parent=gene-CCO47_RS03160;Dbxref=GenBank:WP_001272784.1;Name=WP_001272784.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462122.1;locus_tag=CCO47_RS03160;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272784.1;transl_table=11 NZ_CP075113.1 RefSeq gene 659175 659534 . + . ID=gene-CCO47_RS03165;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=CCO47_RS03165;old_locus_tag=CCO47_03165 NZ_CP075113.1 Protein Homology CDS 659175 659534 . + 0 ID=cds-WP_000355776.1;Parent=gene-CCO47_RS03165;Dbxref=GenBank:WP_000355776.1;Name=WP_000355776.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681574.1;locus_tag=CCO47_RS03165;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_000355776.1;transl_table=11 NZ_CP075113.1 RefSeq gene 659632 660453 . + . ID=gene-CCO47_RS03170;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=CCO47_RS03170;old_locus_tag=CCO47_03170 NZ_CP075113.1 Protein Homology CDS 659632 660453 . + 0 ID=cds-WP_001281934.1;Parent=gene-CCO47_RS03170;Dbxref=GenBank:WP_001281934.1;Name=WP_001281934.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=CCO47_RS03170;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001281934.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 660452 660536 . - . ID=gene-CCO47_RS24395;Name=CCO47_RS24395;end_range=660536,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24395;partial=true;pseudo=true;start_range=.,660452 NZ_CP075113.1 Protein Homology CDS 660452 660536 . - 0 ID=cds-CCO47_RS24395;Parent=gene-CCO47_RS24395;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=660536,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO47_RS24395;partial=true;product=hypothetical protein;pseudo=true;start_range=.,660452;transl_table=11 NZ_CP075113.1 RefSeq gene 660557 661798 . - . ID=gene-CCO47_RS03175;Name=CCO47_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03175;old_locus_tag=CCO47_03175 NZ_CP075113.1 Protein Homology CDS 660557 661798 . - 0 ID=cds-WP_000708447.1;Parent=gene-CCO47_RS03175;Dbxref=GenBank:WP_000708447.1;Name=WP_000708447.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462119.1;locus_tag=CCO47_RS03175;product=multifunctional CCA addition/repair protein;protein_id=WP_000708447.1;transl_table=11 NZ_CP075113.1 RefSeq gene 661861 662475 . - . ID=gene-CCO47_RS03180;Name=CCO47_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03180;old_locus_tag=CCO47_03180 NZ_CP075113.1 Protein Homology CDS 661861 662475 . - 0 ID=cds-WP_001125341.1;Parent=gene-CCO47_RS03180;Dbxref=GenBank:WP_001125341.1;Name=WP_001125341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462118.1;locus_tag=CCO47_RS03180;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001125341.1;transl_table=11 NZ_CP075113.1 RefSeq gene 662717 664018 . + . ID=gene-CCO47_RS03185;Name=CCO47_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03185;old_locus_tag=CCO47_03185 NZ_CP075113.1 Protein Homology CDS 662717 664018 . + 0 ID=cds-WP_000046228.1;Parent=gene-CCO47_RS03185;Dbxref=GenBank:WP_000046228.1;Name=WP_000046228.1;Ontology_term=GO:0046872,GO:0050355;gbkey=CDS;go_function=metal ion binding|0046872||IEA,inorganic triphosphate phosphatase activity|0050355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462117.1;locus_tag=CCO47_RS03185;product=CYTH domain-containing protein;protein_id=WP_000046228.1;transl_table=11 NZ_CP075113.1 RefSeq gene 664136 666979 . + . ID=gene-CCO47_RS03190;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=CCO47_RS03190;old_locus_tag=CCO47_03190 NZ_CP075113.1 Protein Homology CDS 664136 666979 . + 0 ID=cds-WP_000188305.1;Parent=gene-CCO47_RS03190;Dbxref=GenBank:WP_000188305.1;Name=WP_000188305.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462116.1;locus_tag=CCO47_RS03190;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_000188305.1;transl_table=11 NZ_CP075113.1 RefSeq gene 667027 668460 . + . ID=gene-CCO47_RS03195;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=CCO47_RS03195;old_locus_tag=CCO47_03195 NZ_CP075113.1 Protein Homology CDS 667027 668460 . + 0 ID=cds-WP_000867685.1;Parent=gene-CCO47_RS03195;Dbxref=GenBank:WP_000867685.1;Name=WP_000867685.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462115.1;locus_tag=CCO47_RS03195;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_000867685.1;transl_table=11 NZ_CP075113.1 RefSeq gene 668620 668679 . - . ID=gene-CCO47_RS03200;Name=CCO47_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03200;old_locus_tag=CCO47_03200 NZ_CP075113.1 Protein Homology CDS 668620 668679 . - 0 ID=cds-WP_192936148.1;Parent=gene-CCO47_RS03200;Dbxref=GenBank:WP_192936148.1;Name=WP_192936148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=CCO47_RS03200;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_192936148.1;transl_table=11 NZ_CP075113.1 RefSeq gene 668919 670598 . - . ID=gene-CCO47_RS03205;Name=CCO47_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03205;old_locus_tag=CCO47_03205 NZ_CP075113.1 Protein Homology CDS 668919 670598 . - 0 ID=cds-WP_000342889.1;Parent=gene-CCO47_RS03205;Dbxref=GenBank:WP_000342889.1;Name=WP_000342889.1;Ontology_term=GO:0016020,GO:0016600;gbkey=CDS;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=CCO47_RS03205;product=flotillin family protein;protein_id=WP_000342889.1;transl_table=11 NZ_CP075113.1 RefSeq gene 670617 671237 . - . ID=gene-CCO47_RS03210;Name=CCO47_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03210;old_locus_tag=CCO47_03210 NZ_CP075113.1 Protein Homology CDS 670617 671237 . - 0 ID=cds-WP_000171739.1;Parent=gene-CCO47_RS03210;Dbxref=GenBank:WP_000171739.1;Name=WP_000171739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462113.1;locus_tag=CCO47_RS03210;product=OB-fold-containig protein;protein_id=WP_000171739.1;transl_table=11 NZ_CP075113.1 RefSeq gene 671495 671704 . + . ID=gene-CCO47_RS03215;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=CCO47_RS03215;old_locus_tag=CCO47_03215 NZ_CP075113.1 Protein Homology CDS 671495 671704 . + 0 ID=cds-WP_000928927.1;Parent=gene-CCO47_RS03215;Dbxref=GenBank:WP_000928927.1;Name=WP_000928927.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=CCO47_RS03215;product=cell surface composition regulator GlgS;protein_id=WP_000928927.1;transl_table=11 NZ_CP075113.1 RefSeq gene 671779 672075 . - . ID=gene-CCO47_RS03220;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=CCO47_RS03220;old_locus_tag=CCO47_03220 NZ_CP075113.1 Protein Homology CDS 671779 672075 . - 0 ID=cds-WP_000566824.1;Parent=gene-CCO47_RS03220;Dbxref=GenBank:WP_000566824.1;Name=WP_000566824.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566826.1;locus_tag=CCO47_RS03220;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_000566824.1;transl_table=11 NZ_CP075113.1 cmsearch riboswitch 672208 672406 . + . ID=id-NZ_CP075113.1:672208..672406;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CP075113.1 RefSeq gene 672512 673165 . + . ID=gene-CCO47_RS03225;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=CCO47_RS03225;old_locus_tag=CCO47_03225 NZ_CP075113.1 Protein Homology CDS 672512 673165 . + 0 ID=cds-WP_001076978.1;Parent=gene-CCO47_RS03225;Dbxref=GenBank:WP_001076978.1;Name=WP_001076978.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462110.1;locus_tag=CCO47_RS03225;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001076978.1;transl_table=11 NZ_CP075113.1 RefSeq gene 673336 674013 . - . ID=gene-CCO47_RS03230;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=CCO47_RS03230;old_locus_tag=CCO47_03230 NZ_CP075113.1 Protein Homology CDS 673336 674013 . - 0 ID=cds-WP_000345576.1;Parent=gene-CCO47_RS03230;Dbxref=GenBank:WP_000345576.1;Name=WP_000345576.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462109.1;locus_tag=CCO47_RS03230;product=protein-disulfide oxidoreductase DsbI;protein_id=WP_000345576.1;transl_table=11 NZ_CP075113.1 RefSeq gene 674028 674699 . - . ID=gene-CCO47_RS03235;Name=CCO47_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03235;old_locus_tag=CCO47_03235 NZ_CP075113.1 Protein Homology CDS 674028 674699 . - 0 ID=cds-WP_000096230.1;Parent=gene-CCO47_RS03235;Dbxref=GenBank:WP_000096230.1;Name=WP_000096230.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462108.1;locus_tag=CCO47_RS03235;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_000096230.1;transl_table=11 NZ_CP075113.1 RefSeq gene 674719 676515 . - . ID=gene-CCO47_RS03240;Name=CCO47_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03240;old_locus_tag=CCO47_03240 NZ_CP075113.1 Protein Homology CDS 674719 676515 . - 0 ID=cds-WP_000460259.1;Parent=gene-CCO47_RS03240;Dbxref=GenBank:WP_000460259.1;Name=WP_000460259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159766.1;locus_tag=CCO47_RS03240;product=arylsulfate sulfotransferase AssT;protein_id=WP_000460259.1;transl_table=11 NZ_CP075113.1 RefSeq gene 676915 677091 . + . ID=gene-CCO47_RS03245;Name=CCO47_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03245;old_locus_tag=CCO47_03245 NZ_CP075113.1 Protein Homology CDS 676915 677091 . + 0 ID=cds-WP_000469259.1;Parent=gene-CCO47_RS03245;Dbxref=GenBank:WP_000469259.1;Name=WP_000469259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=CCO47_RS03245;product=hypothetical protein;protein_id=WP_000469259.1;transl_table=11 NZ_CP075113.1 RefSeq gene 677158 677931 . - . ID=gene-CCO47_RS03250;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=CCO47_RS03250;old_locus_tag=CCO47_03250 NZ_CP075113.1 Protein Homology CDS 677158 677931 . - 0 ID=cds-WP_000115874.1;Parent=gene-CCO47_RS03250;Dbxref=GenBank:WP_000115874.1;Name=WP_000115874.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462105.1;locus_tag=CCO47_RS03250;product=zinc transporter ZupT;protein_id=WP_000115874.1;transl_table=11 NZ_CP075113.1 RefSeq gene 678072 678860 . + . ID=gene-CCO47_RS03255;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=CCO47_RS03255;old_locus_tag=CCO47_03255 NZ_CP075113.1 Protein Homology CDS 678072 678860 . + 0 ID=cds-WP_001520560.1;Parent=gene-CCO47_RS03255;Dbxref=GenBank:WP_001520560.1;Name=WP_001520560.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=CCO47_RS03255;product=4%2C5-DOPA-extradiol-dioxygenase;protein_id=WP_001520560.1;transl_table=11 NZ_CP075113.1 RefSeq gene 678922 680085 . - . ID=gene-CCO47_RS03260;Name=CCO47_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03260;old_locus_tag=CCO47_03260 NZ_CP075113.1 Protein Homology CDS 678922 680085 . - 0 ID=cds-WP_000442833.1;Parent=gene-CCO47_RS03260;Dbxref=GenBank:WP_000442833.1;Name=WP_000442833.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462103.1;locus_tag=CCO47_RS03260;product=glutathionylspermidine synthase family protein;protein_id=WP_000442833.1;transl_table=11 NZ_CP075113.1 RefSeq gene 680091 680762 . - . ID=gene-CCO47_RS03265;Name=CCO47_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03265;old_locus_tag=CCO47_03265 NZ_CP075113.1 Protein Homology CDS 680091 680762 . - 0 ID=cds-WP_000831528.1;Parent=gene-CCO47_RS03265;Dbxref=GenBank:WP_000831528.1;Name=WP_000831528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462102.1;locus_tag=CCO47_RS03265;product=DUF1190 family protein;protein_id=WP_000831528.1;transl_table=11 NZ_CP075113.1 RefSeq gene 680975 682450 . - . ID=gene-CCO47_RS03270;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=CCO47_RS03270;old_locus_tag=CCO47_03270 NZ_CP075113.1 Protein Homology CDS 680975 682450 . - 0 ID=cds-WP_001575014.1;Parent=gene-CCO47_RS03270;Dbxref=GenBank:WP_001575014.1;Name=WP_001575014.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462101.3;locus_tag=CCO47_RS03270;product=outer membrane channel protein TolC;protein_id=WP_001575014.1;transl_table=11 NZ_CP075113.1 RefSeq gene 682651 683283 . + . ID=gene-CCO47_RS03275;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=CCO47_RS03275;old_locus_tag=CCO47_03275 NZ_CP075113.1 Protein Homology CDS 682651 683283 . + 0 ID=cds-WP_001231952.1;Parent=gene-CCO47_RS03275;Dbxref=GenBank:WP_001231952.1;Name=WP_001231952.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462100.1;locus_tag=CCO47_RS03275;product=ADP-ribose diphosphatase;protein_id=WP_001231952.1;transl_table=11 NZ_CP075113.1 RefSeq gene 683280 683702 . + . ID=gene-CCO47_RS03280;Name=CCO47_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03280;old_locus_tag=CCO47_03280 NZ_CP075113.1 Protein Homology CDS 683280 683702 . + 0 ID=cds-WP_000833404.1;Parent=gene-CCO47_RS03280;Dbxref=GenBank:WP_000833404.1;Name=WP_000833404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462099.1;locus_tag=CCO47_RS03280;product=DUF1249 family protein;protein_id=WP_000833404.1;transl_table=11 NZ_CP075113.1 RefSeq gene 683727 684554 . + . ID=gene-CCO47_RS03285;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=CCO47_RS03285;old_locus_tag=CCO47_03285 NZ_CP075113.1 Protein Homology CDS 683727 684554 . + 0 ID=cds-WP_000444734.1;Parent=gene-CCO47_RS03285;Dbxref=GenBank:WP_000444734.1;Name=WP_000444734.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462098.1;locus_tag=CCO47_RS03285;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444734.1;transl_table=11 NZ_CP075113.1 RefSeq gene 684554 685135 . + . ID=gene-CCO47_RS03290;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=CCO47_RS03290;old_locus_tag=CCO47_03290 NZ_CP075113.1 Protein Homology CDS 684554 685135 . + 0 ID=cds-WP_000105725.1;Parent=gene-CCO47_RS03290;Dbxref=GenBank:WP_000105725.1;Name=WP_000105725.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462097.1;locus_tag=CCO47_RS03290;product=esterase YqiA;protein_id=WP_000105725.1;transl_table=11 NZ_CP075113.1 RefSeq gene 685163 687055 . + . ID=gene-CCO47_RS03295;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=CCO47_RS03295;old_locus_tag=CCO47_03295 NZ_CP075113.1 Protein Homology CDS 685163 687055 . + 0 ID=cds-WP_000195318.1;Parent=gene-CCO47_RS03295;Dbxref=GenBank:WP_000195318.1;Name=WP_000195318.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462096.1;locus_tag=CCO47_RS03295;product=DNA topoisomerase IV subunit B;protein_id=WP_000195318.1;transl_table=11 NZ_CP075113.1 RefSeq gene 687180 687494 . - . ID=gene-CCO47_RS03300;Name=CCO47_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03300;old_locus_tag=CCO47_03300 NZ_CP075113.1 Protein Homology CDS 687180 687494 . - 0 ID=cds-WP_000958587.1;Parent=gene-CCO47_RS03300;Dbxref=GenBank:WP_000958587.1;Name=WP_000958587.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462095.1;locus_tag=CCO47_RS03300;product=putative quinol monooxygenase;protein_id=WP_000958587.1;transl_table=11 NZ_CP075113.1 RefSeq gene 687526 688107 . - . ID=gene-CCO47_RS03305;Name=CCO47_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03305;old_locus_tag=CCO47_03305 NZ_CP075113.1 Protein Homology CDS 687526 688107 . - 0 ID=cds-WP_000065416.1;Parent=gene-CCO47_RS03305;Dbxref=GenBank:WP_000065416.1;Name=WP_000065416.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=CCO47_RS03305;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_000065416.1;transl_table=11 NZ_CP075113.1 RefSeq gene 688214 689563 . - . ID=gene-CCO47_RS03310;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=CCO47_RS03310;old_locus_tag=CCO47_03310 NZ_CP075113.1 Protein Homology CDS 688214 689563 . - 0 ID=cds-WP_000779338.1;Parent=gene-CCO47_RS03310;Dbxref=GenBank:WP_000779338.1;Name=WP_000779338.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=CCO47_RS03310;product=quorum sensing histidine kinase QseC;protein_id=WP_000779338.1;transl_table=11 NZ_CP075113.1 RefSeq gene 689560 690219 . - . ID=gene-CCO47_RS03315;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=CCO47_RS03315;old_locus_tag=CCO47_03315 NZ_CP075113.1 Protein Homology CDS 689560 690219 . - 0 ID=cds-WP_001221574.1;Parent=gene-CCO47_RS03315;Dbxref=GenBank:WP_001221574.1;Name=WP_001221574.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462092.1;locus_tag=CCO47_RS03315;product=quorum sensing response regulator transcription factor QseB;protein_id=WP_001221574.1;transl_table=11 NZ_CP075113.1 RefSeq gene 690371 690763 . + . ID=gene-CCO47_RS03320;Name=CCO47_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03320;old_locus_tag=CCO47_03320 NZ_CP075113.1 Protein Homology CDS 690371 690763 . + 0 ID=cds-WP_000731552.1;Parent=gene-CCO47_RS03320;Dbxref=GenBank:WP_000731552.1;Name=WP_000731552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462091.1;locus_tag=CCO47_RS03320;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_000731552.1;transl_table=11 NZ_CP075113.1 RefSeq gene 690835 691701 . + . ID=gene-CCO47_RS03325;Name=CCO47_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03325;old_locus_tag=CCO47_03325 NZ_CP075113.1 Protein Homology CDS 690835 691701 . + 0 ID=cds-WP_000998803.1;Parent=gene-CCO47_RS03325;Dbxref=GenBank:WP_000998803.1;Name=WP_000998803.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462090.1;locus_tag=CCO47_RS03325;product=AraC family transcriptional regulator;protein_id=WP_000998803.1;transl_table=11 NZ_CP075113.1 RefSeq gene 691812 694070 . + . ID=gene-CCO47_RS03330;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=CCO47_RS03330;old_locus_tag=CCO47_03330 NZ_CP075113.1 Protein Homology CDS 691812 694070 . + 0 ID=cds-WP_094912429.1;Parent=gene-CCO47_RS03330;Dbxref=GenBank:WP_094912429.1;Name=WP_094912429.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462089.1;locus_tag=CCO47_RS03330;product=DNA topoisomerase IV subunit A;protein_id=WP_094912429.1;transl_table=11 NZ_CP075113.1 RefSeq gene 694327 695064 . + . ID=gene-CCO47_RS03335;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=CCO47_RS03335;old_locus_tag=CCO47_03335 NZ_CP075113.1 Protein Homology CDS 694327 695064 . + 0 ID=cds-WP_000965730.1;Parent=gene-CCO47_RS03335;Dbxref=GenBank:WP_000965730.1;Name=WP_000965730.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462088.1;locus_tag=CCO47_RS03335;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_000965730.1;transl_table=11 NZ_CP075113.1 RefSeq gene 695138 696550 . + . ID=gene-CCO47_RS03340;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=CCO47_RS03340;old_locus_tag=CCO47_03340 NZ_CP075113.1 Protein Homology CDS 695138 696550 . + 0 ID=cds-WP_000010660.1;Parent=gene-CCO47_RS03340;Dbxref=GenBank:WP_000010660.1;Name=WP_000010660.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462087.1;locus_tag=CCO47_RS03340;product=cell division protein FtsP;protein_id=WP_000010660.1;transl_table=11 NZ_CP075113.1 RefSeq gene 696595 697902 . - . ID=gene-CCO47_RS03345;Name=CCO47_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03345;old_locus_tag=CCO47_03345 NZ_CP075113.1 Protein Homology CDS 696595 697902 . - 0 ID=cds-WP_000345261.1;Parent=gene-CCO47_RS03345;Dbxref=GenBank:WP_000345261.1;Name=WP_000345261.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462086.1;locus_tag=CCO47_RS03345;product=TRAP transporter large permease;protein_id=WP_000345261.1;transl_table=11 NZ_CP075113.1 RefSeq gene 697913 698395 . - . ID=gene-CCO47_RS03350;Name=CCO47_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03350;old_locus_tag=CCO47_03350 NZ_CP075113.1 Protein Homology CDS 697913 698395 . - 0 ID=cds-WP_001221825.1;Parent=gene-CCO47_RS03350;Dbxref=GenBank:WP_001221825.1;Name=WP_001221825.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462085.1;locus_tag=CCO47_RS03350;product=TRAP transporter small permease;protein_id=WP_001221825.1;transl_table=11 NZ_CP075113.1 RefSeq gene 698437 699420 . - . ID=gene-CCO47_RS03355;Name=CCO47_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03355;old_locus_tag=CCO47_03355 NZ_CP075113.1 Protein Homology CDS 698437 699420 . - 0 ID=cds-WP_000799367.1;Parent=gene-CCO47_RS03355;Dbxref=GenBank:WP_000799367.1;Name=WP_000799367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462084.1;locus_tag=CCO47_RS03355;product=TRAP transporter substrate-binding protein;protein_id=WP_000799367.1;transl_table=11 NZ_CP075113.1 RefSeq gene 699908 702079 . + . ID=gene-CCO47_RS03360;Name=CCO47_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03360;old_locus_tag=CCO47_03360 NZ_CP075113.1 Protein Homology CDS 699908 702079 . + 0 ID=cds-WP_001274458.1;Parent=gene-CCO47_RS03360;Dbxref=GenBank:WP_001274458.1;Name=WP_001274458.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462083.1;locus_tag=CCO47_RS03360;product=YgiQ family radical SAM protein;protein_id=WP_001274458.1;transl_table=11 NZ_CP075113.1 RefSeq gene 702282 702476 . + . ID=gene-CCO47_RS03365;Name=CCO47_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03365;old_locus_tag=CCO47_03365 NZ_CP075113.1 GeneMarkS-2+ CDS 702282 702476 . + 0 ID=cds-WP_000525384.1;Parent=gene-CCO47_RS03365;Dbxref=GenBank:WP_000525384.1;Name=WP_000525384.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO47_RS03365;product=hypothetical protein;protein_id=WP_000525384.1;transl_table=11 NZ_CP075113.1 RefSeq gene 702634 703089 . - . ID=gene-CCO47_RS03370;Name=CCO47_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03370;old_locus_tag=CCO47_03370 NZ_CP075113.1 Protein Homology CDS 702634 703089 . - 0 ID=cds-WP_000128242.1;Parent=gene-CCO47_RS03370;Dbxref=GenBank:WP_000128242.1;Name=WP_000128242.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462082.1;locus_tag=CCO47_RS03370;product=HIT family protein;protein_id=WP_000128242.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 703134 704619 . - . ID=gene-CCO47_RS03375;Name=CCO47_RS03375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS03375;old_locus_tag=CCO47_03375;pseudo=true NZ_CP075113.1 Protein Homology CDS 703134 704619 . - 0 ID=cds-CCO47_RS03375;Parent=gene-CCO47_RS03375;Note=frameshifted;Ontology_term=GO:0006820,GO:0008509,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462081.3;locus_tag=CCO47_RS03375;product=DASS family sodium-coupled anion symporter;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 704785 705612 . - . ID=gene-CCO47_RS03380;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=CCO47_RS03380;old_locus_tag=CCO47_03380 NZ_CP075113.1 Protein Homology CDS 704785 705612 . - 0 ID=cds-WP_000013100.1;Parent=gene-CCO47_RS03380;Dbxref=GenBank:WP_000013100.1;Name=WP_000013100.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=CCO47_RS03380;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_000013100.1;transl_table=11 NZ_CP075113.1 RefSeq gene 705718 706881 . - . ID=gene-CCO47_RS03385;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=CCO47_RS03385;old_locus_tag=CCO47_03385 NZ_CP075113.1 Protein Homology CDS 705718 706881 . - 0 ID=cds-WP_001058721.1;Parent=gene-CCO47_RS03385;Dbxref=GenBank:WP_001058721.1;Name=WP_001058721.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462079.1;locus_tag=CCO47_RS03385;product=alcohol dehydrogenase;protein_id=WP_001058721.1;transl_table=11 NZ_CP075113.1 RefSeq gene 707074 707973 . + . ID=gene-CCO47_RS03390;Name=CCO47_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03390;old_locus_tag=CCO47_03390 NZ_CP075113.1 Protein Homology CDS 707074 707973 . + 0 ID=cds-WP_001078198.1;Parent=gene-CCO47_RS03390;Dbxref=GenBank:WP_001078198.1;Name=WP_001078198.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=CCO47_RS03390;product=AraC family transcriptional regulator;protein_id=WP_001078198.1;transl_table=11 NZ_CP075113.1 RefSeq gene 708037 708696 . - . ID=gene-CCO47_RS03395;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=CCO47_RS03395;old_locus_tag=CCO47_03395 NZ_CP075113.1 Protein Homology CDS 708037 708696 . - 0 ID=cds-WP_000268444.1;Parent=gene-CCO47_RS03395;Dbxref=GenBank:WP_000268444.1;Name=WP_000268444.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462077.1;locus_tag=CCO47_RS03395;product=DedA family general envelope maintenance protein YghB;protein_id=WP_000268444.1;transl_table=11 NZ_CP075113.1 RefSeq gene 708836 710023 . - . ID=gene-CCO47_RS03400;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=CCO47_RS03400;old_locus_tag=CCO47_03400 NZ_CP075113.1 Protein Homology CDS 708836 710023 . - 0 ID=cds-WP_000130265.1;Parent=gene-CCO47_RS03400;Dbxref=GenBank:WP_000130265.1;Name=WP_000130265.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462076.1;locus_tag=CCO47_RS03400;product=cystathionine beta-lyase;protein_id=WP_000130265.1;transl_table=11 NZ_CP075113.1 RefSeq gene 710275 711009 . + . ID=gene-CCO47_RS03405;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=CCO47_RS03405;old_locus_tag=CCO47_03405 NZ_CP075113.1 Protein Homology CDS 710275 711009 . + 0 ID=cds-WP_000527859.1;Parent=gene-CCO47_RS03405;Dbxref=GenBank:WP_000527859.1;Name=WP_000527859.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462074.1;locus_tag=CCO47_RS03405;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_000527859.1;transl_table=11 NZ_CP075113.1 RefSeq gene 711016 711441 . + . ID=gene-CCO47_RS03410;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=CCO47_RS03410;old_locus_tag=CCO47_03410 NZ_CP075113.1 Protein Homology CDS 711016 711441 . + 0 ID=cds-WP_001251476.1;Parent=gene-CCO47_RS03410;Dbxref=GenBank:WP_001251476.1;Name=WP_001251476.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462073.1;locus_tag=CCO47_RS03410;product=TonB system transport protein ExbD;protein_id=WP_001251476.1;transl_table=11 NZ_CP075113.1 RefSeq gene 711554 712438 . - . ID=gene-CCO47_RS03415;Name=CCO47_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03415;old_locus_tag=CCO47_03415 NZ_CP075113.1 Protein Homology CDS 711554 712438 . - 0 ID=cds-WP_000019032.1;Parent=gene-CCO47_RS03415;Dbxref=GenBank:WP_000019032.1;Name=WP_000019032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462072.1;locus_tag=CCO47_RS03415;product=SDR family oxidoreductase;protein_id=WP_000019032.1;transl_table=11 NZ_CP075113.1 RefSeq gene 712562 712966 . - . ID=gene-CCO47_RS03420;Name=CCO47_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03420;old_locus_tag=CCO47_03420 NZ_CP075113.1 Protein Homology CDS 712562 712966 . - 0 ID=cds-WP_000665661.1;Parent=gene-CCO47_RS03420;Dbxref=GenBank:WP_000665661.1;Name=WP_000665661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=CCO47_RS03420;product=hypothetical protein;protein_id=WP_000665661.1;transl_table=11 NZ_CP075113.1 RefSeq gene 712953 713363 . - . ID=gene-CCO47_RS03425;Name=CCO47_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03425;old_locus_tag=CCO47_03425 NZ_CP075113.1 Protein Homology CDS 712953 713363 . - 0 ID=cds-WP_000936449.1;Parent=gene-CCO47_RS03425;Dbxref=GenBank:WP_000936449.1;Name=WP_000936449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462070.1;locus_tag=CCO47_RS03425;product=hypothetical protein;protein_id=WP_000936449.1;transl_table=11 NZ_CP075113.1 RefSeq gene 713467 713970 . + . ID=gene-CCO47_RS03430;Name=CCO47_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03430;old_locus_tag=CCO47_03430 NZ_CP075113.1 Protein Homology CDS 713467 713970 . + 0 ID=cds-WP_001519110.1;Parent=gene-CCO47_RS03430;Dbxref=GenBank:WP_001519110.1;Name=WP_001519110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441059.1;locus_tag=CCO47_RS03430;product=ESA_00282 family adhesion-associated protein;protein_id=WP_001519110.1;transl_table=11 NZ_CP075113.1 RefSeq gene 714250 714744 . + . ID=gene-CCO47_RS03435;Name=CCO47_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03435;old_locus_tag=CCO47_03435 NZ_CP075113.1 Protein Homology CDS 714250 714744 . + 0 ID=cds-WP_000439333.1;Parent=gene-CCO47_RS03435;Dbxref=GenBank:WP_000439333.1;Name=WP_000439333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462068.1;locus_tag=CCO47_RS03435;product=TIGR00645 family protein;protein_id=WP_000439333.1;transl_table=11 NZ_CP075113.1 RefSeq gene 715051 716694 . + . ID=gene-CCO47_RS03440;Name=CCO47_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03440;old_locus_tag=CCO47_03440 NZ_CP075113.1 Protein Homology CDS 715051 716694 . + 0 ID=cds-WP_001238429.1;Parent=gene-CCO47_RS03440;Dbxref=GenBank:WP_001238429.1;Name=WP_001238429.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=CCO47_RS03440;product=methyl-accepting chemotaxis protein;protein_id=WP_001238429.1;transl_table=11 NZ_CP075113.1 RefSeq gene 716779 717066 . + . ID=gene-CCO47_RS03445;Name=CCO47_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03445;old_locus_tag=CCO47_03445 NZ_CP075113.1 Protein Homology CDS 716779 717066 . + 0 ID=cds-WP_001059120.1;Parent=gene-CCO47_RS03445;Dbxref=GenBank:WP_001059120.1;Name=WP_001059120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462066.1;locus_tag=CCO47_RS03445;product=DUF2623 family protein;protein_id=WP_001059120.1;transl_table=11 NZ_CP075113.1 RefSeq gene 717256 718374 . + . ID=gene-CCO47_RS03450;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=CCO47_RS03450;old_locus_tag=CCO47_03450 NZ_CP075113.1 Protein Homology CDS 717256 718374 . + 0 ID=cds-WP_000145428.1;Parent=gene-CCO47_RS03450;Dbxref=GenBank:WP_000145428.1;Name=WP_000145428.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462065.1;locus_tag=CCO47_RS03450;product=hydrogenase 2 small subunit;protein_id=WP_000145428.1;transl_table=11 NZ_CP075113.1 RefSeq gene 718377 719363 . + . ID=gene-CCO47_RS03455;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=CCO47_RS03455;old_locus_tag=CCO47_03455 NZ_CP075113.1 Protein Homology CDS 718377 719363 . + 0 ID=cds-WP_001081721.1;Parent=gene-CCO47_RS03455;Dbxref=GenBank:WP_001081721.1;Name=WP_001081721.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462064.1;locus_tag=CCO47_RS03455;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081721.1;transl_table=11 NZ_CP075113.1 RefSeq gene 719353 720531 . + . ID=gene-CCO47_RS03460;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=CCO47_RS03460;old_locus_tag=CCO47_03460 NZ_CP075113.1 Protein Homology CDS 719353 720531 . + 0 ID=cds-WP_000017678.1;Parent=gene-CCO47_RS03460;Dbxref=GenBank:WP_000017678.1;Name=WP_000017678.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=CCO47_RS03460;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_000017678.1;transl_table=11 NZ_CP075113.1 RefSeq gene 720528 722231 . + . ID=gene-CCO47_RS03465;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=CCO47_RS03465;old_locus_tag=CCO47_03465 NZ_CP075113.1 Protein Homology CDS 720528 722231 . + 0 ID=cds-WP_000083044.1;Parent=gene-CCO47_RS03465;Dbxref=GenBank:WP_000083044.1;Name=WP_000083044.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462062.1;locus_tag=CCO47_RS03465;product=hydrogenase 2 large subunit;protein_id=WP_000083044.1;transl_table=11 NZ_CP075113.1 RefSeq gene 722231 722725 . + . ID=gene-CCO47_RS03470;Name=CCO47_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03470;old_locus_tag=CCO47_03470 NZ_CP075113.1 Protein Homology CDS 722231 722725 . + 0 ID=cds-WP_001221962.1;Parent=gene-CCO47_RS03470;Dbxref=GenBank:WP_001221962.1;Name=WP_001221962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462061.1;locus_tag=CCO47_RS03470;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221962.1;transl_table=11 NZ_CP075113.1 RefSeq gene 722718 723206 . + . ID=gene-CCO47_RS03475;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=CCO47_RS03475;old_locus_tag=CCO47_03475 NZ_CP075113.1 Protein Homology CDS 722718 723206 . + 0 ID=cds-WP_000004950.1;Parent=gene-CCO47_RS03475;Dbxref=GenBank:WP_000004950.1;Name=WP_000004950.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462060.1;locus_tag=CCO47_RS03475;product=hydrogenase-2 assembly chaperone;protein_id=WP_000004950.1;transl_table=11 NZ_CP075113.1 RefSeq gene 723199 723540 . + . ID=gene-CCO47_RS03480;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=CCO47_RS03480;old_locus_tag=CCO47_03480 NZ_CP075113.1 Protein Homology CDS 723199 723540 . + 0 ID=cds-WP_000544946.1;Parent=gene-CCO47_RS03480;Dbxref=GenBank:WP_000544946.1;Name=WP_000544946.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462059.1;locus_tag=CCO47_RS03480;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544946.1;transl_table=11 NZ_CP075113.1 RefSeq gene 723568 723816 . + . ID=gene-CCO47_RS03485;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=CCO47_RS03485;old_locus_tag=CCO47_03485 NZ_CP075113.1 Protein Homology CDS 723568 723816 . + 0 ID=cds-WP_000334889.1;Parent=gene-CCO47_RS03485;Dbxref=GenBank:WP_000334889.1;Name=WP_000334889.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462058.1;locus_tag=CCO47_RS03485;product=hydrogenase maturation factor HybG;protein_id=WP_000334889.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 723892 724944 . + . ID=gene-CCO47_RS03490;Name=CCO47_RS03490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS03490;old_locus_tag=CCO47_03490;pseudo=true NZ_CP075113.1 Protein Homology CDS 723892 724944 . + 0 ID=cds-CCO47_RS03490;Parent=gene-CCO47_RS03490;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462057.1;locus_tag=CCO47_RS03490;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 724944 725645 . + . ID=gene-CCO47_RS03495;Name=CCO47_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03495;old_locus_tag=CCO47_03495 NZ_CP075113.1 Protein Homology CDS 724944 725645 . + 0 ID=cds-WP_001220939.1;Parent=gene-CCO47_RS03495;Dbxref=GenBank:WP_001220939.1;Name=WP_001220939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=CCO47_RS03495;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_001220939.1;transl_table=11 NZ_CP075113.1 RefSeq gene 725713 726579 . - . ID=gene-CCO47_RS03500;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=CCO47_RS03500;old_locus_tag=CCO47_03500 NZ_CP075113.1 Protein Homology CDS 725713 726579 . - 0 ID=cds-WP_000774860.1;Parent=gene-CCO47_RS03500;Dbxref=GenBank:WP_000774860.1;Name=WP_000774860.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=CCO47_RS03500;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_000774860.1;transl_table=11 NZ_CP075113.1 RefSeq gene 726806 728662 . + . ID=gene-CCO47_RS03505;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=CCO47_RS03505;old_locus_tag=CCO47_03505 NZ_CP075113.1 Protein Homology CDS 726806 728662 . + 0 ID=cds-WP_000033694.1;Parent=gene-CCO47_RS03505;Dbxref=GenBank:WP_000033694.1;Name=WP_000033694.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462054.1;locus_tag=CCO47_RS03505;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_000033694.1;transl_table=11 NZ_CP075113.1 RefSeq gene 729332 730390 . + . ID=gene-CCO47_RS03510;Name=CCO47_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03510;old_locus_tag=CCO47_03510 NZ_CP075113.1 Protein Homology CDS 729332 730390 . + 0 ID=cds-WP_000475246.1;Parent=gene-CCO47_RS03510;Dbxref=GenBank:WP_000475246.1;Name=WP_000475246.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA,zinc ion binding|0008270||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462053.1;locus_tag=CCO47_RS03510;product=methyl-accepting chemotaxis protein;protein_id=WP_000475246.1;transl_table=11 NZ_CP075113.1 RefSeq gene 730691 732103 . - . ID=gene-CCO47_RS03515;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=CCO47_RS03515;old_locus_tag=CCO47_03515 NZ_CP075113.1 Protein Homology CDS 730691 732103 . - 0 ID=cds-WP_000190182.1;Parent=gene-CCO47_RS03515;Dbxref=GenBank:WP_000190182.1;Name=WP_000190182.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462052.1;locus_tag=CCO47_RS03515;product=glucuronate isomerase;protein_id=WP_000190182.1;transl_table=11 NZ_CP075113.1 RefSeq gene 732115 733587 . - . ID=gene-CCO47_RS03520;Name=CCO47_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03520;old_locus_tag=CCO47_03520 NZ_CP075113.1 Protein Homology CDS 732115 733587 . - 0 ID=cds-WP_000437127.1;Parent=gene-CCO47_RS03520;Dbxref=GenBank:WP_000437127.1;Name=WP_000437127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462051.1;locus_tag=CCO47_RS03520;product=fructuronate reductase;protein_id=WP_000437127.1;transl_table=11 NZ_CP075113.1 RefSeq gene 733698 734882 . - . ID=gene-CCO47_RS03525;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=CCO47_RS03525;old_locus_tag=CCO47_03525 NZ_CP075113.1 Protein Homology CDS 733698 734882 . - 0 ID=cds-WP_000815479.1;Parent=gene-CCO47_RS03525;Dbxref=GenBank:WP_000815479.1;Name=WP_000815479.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462050.1;locus_tag=CCO47_RS03525;product=mannonate dehydratase;protein_id=WP_000815479.1;transl_table=11 NZ_CP075113.1 RefSeq gene 735287 736591 . + . ID=gene-CCO47_RS03530;Name=CCO47_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03530;old_locus_tag=CCO47_03530 NZ_CP075113.1 Protein Homology CDS 735287 736591 . + 0 ID=cds-WP_000784365.1;Parent=gene-CCO47_RS03530;Dbxref=GenBank:WP_000784365.1;Name=WP_000784365.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462049.1;locus_tag=CCO47_RS03530;product=MFS transporter;protein_id=WP_000784365.1;transl_table=11 NZ_CP075113.1 RefSeq gene 736987 737865 . + . ID=gene-CCO47_RS03535;Name=CCO47_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03535;old_locus_tag=CCO47_03535 NZ_CP075113.1 Protein Homology CDS 736987 737865 . + 0 ID=cds-WP_000089254.1;Parent=gene-CCO47_RS03535;Dbxref=GenBank:WP_000089254.1;Name=WP_000089254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462048.1;locus_tag=CCO47_RS03535;product=carbon-nitrogen hydrolase family protein;protein_id=WP_000089254.1;transl_table=11 NZ_CP075113.1 RefSeq gene 737904 738827 . + . ID=gene-CCO47_RS03540;Name=CCO47_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03540;old_locus_tag=CCO47_03540 NZ_CP075113.1 Protein Homology CDS 737904 738827 . + 0 ID=cds-WP_000540888.1;Parent=gene-CCO47_RS03540;Dbxref=GenBank:WP_000540888.1;Name=WP_000540888.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462047.1;locus_tag=CCO47_RS03540;product=polysaccharide deacetylase family protein;protein_id=WP_000540888.1;transl_table=11 NZ_CP075113.1 RefSeq gene 739551 740036 . + . ID=gene-CCO47_RS03545;Name=CCO47_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03545;old_locus_tag=CCO47_03545 NZ_CP075113.1 Protein Homology CDS 739551 740036 . + 0 ID=cds-WP_000338753.1;Parent=gene-CCO47_RS03545;Dbxref=GenBank:WP_000338753.1;Name=WP_000338753.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462046.1;locus_tag=CCO47_RS03545;product=Hcp family type VI secretion system effector;protein_id=WP_000338753.1;transl_table=11 NZ_CP075113.1 RefSeq gene 740036 740416 . + . ID=gene-CCO47_RS03550;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=CCO47_RS03550;old_locus_tag=CCO47_03550 NZ_CP075113.1 Protein Homology CDS 740036 740416 . + 0 ID=cds-WP_000988938.1;Parent=gene-CCO47_RS03550;Dbxref=GenBank:WP_000988938.1;Name=WP_000988938.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462045.1;locus_tag=CCO47_RS03550;product=anti-adapter protein IraD;protein_id=WP_000988938.1;transl_table=11 NZ_CP075113.1 RefSeq gene 740552 742036 . - . ID=gene-CCO47_RS03555;Name=CCO47_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03555;old_locus_tag=CCO47_03555 NZ_CP075113.1 Protein Homology CDS 740552 742036 . - 0 ID=cds-WP_001286385.1;Parent=gene-CCO47_RS03555;Dbxref=GenBank:WP_001286385.1;Name=WP_001286385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=CCO47_RS03555;product=NAD-dependent phenylacetaldehyde dehydrogenase;protein_id=WP_001286385.1;transl_table=11 NZ_CP075113.1 RefSeq gene 742198 743499 . + . ID=gene-CCO47_RS03560;Name=CCO47_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03560;old_locus_tag=CCO47_03560 NZ_CP075113.1 Protein Homology CDS 742198 743499 . + 0 ID=cds-WP_001092814.1;Parent=gene-CCO47_RS03560;Dbxref=GenBank:WP_001092814.1;Name=WP_001092814.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462043.1;locus_tag=CCO47_RS03560;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_001092814.1;transl_table=11 NZ_CP075113.1 RefSeq gene 743514 743888 . + . ID=gene-CCO47_RS03565;Name=CCO47_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03565;old_locus_tag=CCO47_03565 NZ_CP075113.1 Protein Homology CDS 743514 743888 . + 0 ID=cds-WP_000542980.1;Parent=gene-CCO47_RS03565;Dbxref=GenBank:WP_000542980.1;Name=WP_000542980.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462042.1;locus_tag=CCO47_RS03565;product=cupin domain-containing protein;protein_id=WP_000542980.1;transl_table=11 NZ_CP075113.1 RefSeq gene 744097 745596 . + . ID=gene-CCO47_RS03570;Name=CCO47_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03570;old_locus_tag=CCO47_03570 NZ_CP075113.1 Protein Homology CDS 744097 745596 . + 0 ID=cds-WP_000475954.1;Parent=gene-CCO47_RS03570;Dbxref=GenBank:WP_000475954.1;Name=WP_000475954.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462041.1;locus_tag=CCO47_RS03570;product=APC family permease;protein_id=WP_000475954.1;transl_table=11 NZ_CP075113.1 RefSeq gene 745574 746131 . + . ID=gene-CCO47_RS03575;Name=CCO47_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03575;old_locus_tag=CCO47_03575 NZ_CP075113.1 Protein Homology CDS 745574 746131 . + 0 ID=cds-WP_000100113.1;Parent=gene-CCO47_RS03575;Dbxref=GenBank:WP_000100113.1;Name=WP_000100113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=CCO47_RS03575;product=DUF3156 family protein;protein_id=WP_000100113.1;transl_table=11 NZ_CP075113.1 RefSeq gene 746236 746919 . - . ID=gene-CCO47_RS03580;Name=CCO47_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03580;old_locus_tag=CCO47_03580 NZ_CP075113.1 Protein Homology CDS 746236 746919 . - 0 ID=cds-WP_001275354.1;Parent=gene-CCO47_RS03580;Dbxref=GenBank:WP_001275354.1;Name=WP_001275354.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462039.1;locus_tag=CCO47_RS03580;product=helix-turn-helix transcriptional regulator;protein_id=WP_001275354.1;transl_table=11 NZ_CP075113.1 RefSeq gene 747431 748615 . + . ID=gene-CCO47_RS03585;Name=CCO47_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03585;old_locus_tag=CCO47_03585 NZ_CP075113.1 Protein Homology CDS 747431 748615 . + 0 ID=cds-WP_000933436.1;Parent=gene-CCO47_RS03585;Dbxref=GenBank:WP_000933436.1;Name=WP_000933436.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462038.1;locus_tag=CCO47_RS03585;product=anaerobic sulfatase maturase;protein_id=WP_000933436.1;transl_table=11 NZ_CP075113.1 RefSeq gene 748684 750423 . + . ID=gene-CCO47_RS03590;Name=CCO47_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03590;old_locus_tag=CCO47_03590 NZ_CP075113.1 Protein Homology CDS 748684 750423 . + 0 ID=cds-WP_000712458.1;Parent=gene-CCO47_RS03590;Dbxref=GenBank:WP_000712458.1;Name=WP_000712458.1;Ontology_term=GO:0004065,GO:0008081,GO:0046872;gbkey=CDS;go_function=arylsulfatase activity|0004065||IEA,phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462037.1;locus_tag=CCO47_RS03590;product=arylsulfatase;protein_id=WP_000712458.1;transl_table=11 NZ_CP075113.1 RefSeq gene 750471 751349 . - . ID=gene-CCO47_RS03595;Name=ripR;gbkey=Gene;gene=ripR;gene_biotype=protein_coding;locus_tag=CCO47_RS03595;old_locus_tag=CCO47_03595 NZ_CP075113.1 Protein Homology CDS 750471 751349 . - 0 ID=cds-WP_000423170.1;Parent=gene-CCO47_RS03595;Dbxref=GenBank:WP_000423170.1;Name=WP_000423170.1;gbkey=CDS;gene=ripR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462036.1;locus_tag=CCO47_RS03595;product=itaconate degradation transcriptional regulator RipR;protein_id=WP_000423170.1;transl_table=11 NZ_CP075113.1 RefSeq gene 751441 752283 . + . ID=gene-CCO47_RS03600;Name=ripC;gbkey=Gene;gene=ripC;gene_biotype=protein_coding;locus_tag=CCO47_RS03600;old_locus_tag=CCO47_03600 NZ_CP075113.1 Protein Homology CDS 751441 752283 . + 0 ID=cds-WP_001112897.1;Parent=gene-CCO47_RS03600;Dbxref=GenBank:WP_001112897.1;Name=WP_001112897.1;Note=Third step in itaconate degradation.;gbkey=CDS;gene=ripC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462035.1;locus_tag=CCO47_RS03600;product=itaconate degradation C-C-lyase RipC;protein_id=WP_001112897.1;transl_table=11 NZ_CP075113.1 RefSeq gene 752307 752834 . + . ID=gene-CCO47_RS03605;Name=ripB;gbkey=Gene;gene=ripB;gene_biotype=protein_coding;locus_tag=CCO47_RS03605;old_locus_tag=CCO47_03605 NZ_CP075113.1 Protein Homology CDS 752307 752834 . + 0 ID=cds-WP_001094307.1;Parent=gene-CCO47_RS03605;Dbxref=GenBank:WP_001094307.1;Name=WP_001094307.1;Note=Second step in itaconate degradation.;gbkey=CDS;gene=ripB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462034.1;locus_tag=CCO47_RS03605;product=(R)-specific enoyl-CoA hydratase RipB/Ich;protein_id=WP_001094307.1;transl_table=11 NZ_CP075113.1 RefSeq gene 752859 754184 . + . ID=gene-CCO47_RS03610;Name=ripA;gbkey=Gene;gene=ripA;gene_biotype=protein_coding;gene_synonym=ict;locus_tag=CCO47_RS03610;old_locus_tag=CCO47_03610 NZ_CP075113.1 Protein Homology CDS 752859 754184 . + 0 ID=cds-WP_000982337.1;Parent=gene-CCO47_RS03610;Dbxref=GenBank:WP_000982337.1;Name=WP_000982337.1;Note=Transfers CoA from succinate to itaconate;gbkey=CDS;gene=ripA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462033.1;locus_tag=CCO47_RS03610;product=itaconate CoA-transferase RipA/Ict;protein_id=WP_000982337.1;transl_table=11 NZ_CP075113.1 RefSeq gene 754249 754629 . + . ID=gene-CCO47_RS03615;Name=CCO47_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03615;old_locus_tag=CCO47_03615 NZ_CP075113.1 Protein Homology CDS 754249 754629 . + 0 ID=cds-WP_000582672.1;Parent=gene-CCO47_RS03615;Dbxref=GenBank:WP_000582672.1;Name=WP_000582672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582669.1;locus_tag=CCO47_RS03615;product=VOC family protein;protein_id=WP_000582672.1;transl_table=11 NZ_CP075113.1 RefSeq gene 754788 754863 . - . ID=gene-CCO47_RS03620;Name=CCO47_RS03620;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS03620;old_locus_tag=CCO47_03620 NZ_CP075113.1 tRNAscan-SE tRNA 754788 754863 . - . ID=rna-CCO47_RS03620;Parent=gene-CCO47_RS03620;anticodon=(pos:complement(754828..754830));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS03620;product=tRNA-Phe NZ_CP075113.1 tRNAscan-SE exon 754788 754863 . - . ID=exon-CCO47_RS03620-1;Parent=rna-CCO47_RS03620;anticodon=(pos:complement(754828..754830));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS03620;product=tRNA-Phe NZ_CP075113.1 RefSeq gene 754969 755676 . - . ID=gene-CCO47_RS03625;Name=CCO47_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03625;old_locus_tag=CCO47_03625 NZ_CP075113.1 Protein Homology CDS 754969 755676 . - 0 ID=cds-WP_000234466.1;Parent=gene-CCO47_RS03625;Dbxref=GenBank:WP_000234466.1;Name=WP_000234466.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462031.1;locus_tag=CCO47_RS03625;product=DUF554 domain-containing protein;protein_id=WP_000234466.1;transl_table=11 NZ_CP075113.1 RefSeq gene 756101 758236 . + . ID=gene-CCO47_RS03630;Name=CCO47_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03630;old_locus_tag=CCO47_03630 NZ_CP075113.1 Protein Homology CDS 756101 758236 . + 0 ID=cds-WP_000839715.1;Parent=gene-CCO47_RS03630;Dbxref=GenBank:WP_000839715.1;Name=WP_000839715.1;Ontology_term=GO:0006596,GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;go_process=polyamine biosynthetic process|0006596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=CCO47_RS03630;product=ornithine decarboxylase;protein_id=WP_000839715.1;transl_table=11 NZ_CP075113.1 RefSeq gene 758298 759554 . - . ID=gene-CCO47_RS03635;Name=CCO47_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03635;old_locus_tag=CCO47_03635 NZ_CP075113.1 Protein Homology CDS 758298 759554 . - 0 ID=cds-WP_001049798.1;Parent=gene-CCO47_RS03635;Dbxref=GenBank:WP_001049798.1;Name=WP_001049798.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=CCO47_RS03635;product=nucleoside permease;protein_id=WP_001049798.1;transl_table=11 NZ_CP075113.1 RefSeq gene 759771 760856 . - . ID=gene-CCO47_RS03640;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=CCO47_RS03640;old_locus_tag=CCO47_03640 NZ_CP075113.1 Protein Homology CDS 759771 760856 . - 0 ID=cds-WP_000976289.1;Parent=gene-CCO47_RS03640;Dbxref=GenBank:WP_000976289.1;Name=WP_000976289.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462028.1;locus_tag=CCO47_RS03640;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_000976289.1;transl_table=11 NZ_CP075113.1 RefSeq gene 760969 761244 . - . ID=gene-CCO47_RS03645;Name=CCO47_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03645;old_locus_tag=CCO47_03645 NZ_CP075113.1 Protein Homology CDS 760969 761244 . - 0 ID=cds-WP_000091706.1;Parent=gene-CCO47_RS03645;Dbxref=GenBank:WP_000091706.1;Name=WP_000091706.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462027.1;locus_tag=CCO47_RS03645;product=oxidative damage protection protein;protein_id=WP_000091706.1;transl_table=11 NZ_CP075113.1 RefSeq gene 761272 762324 . - . ID=gene-CCO47_RS03650;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=CCO47_RS03650;old_locus_tag=CCO47_03650 NZ_CP075113.1 Protein Homology CDS 761272 762324 . - 0 ID=cds-WP_001148956.1;Parent=gene-CCO47_RS03650;Dbxref=GenBank:WP_001148956.1;Name=WP_001148956.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462026.1;locus_tag=CCO47_RS03650;product=A/G-specific adenine glycosylase;protein_id=WP_001148956.1;transl_table=11 NZ_CP075113.1 RefSeq gene 762479 763198 . + . ID=gene-CCO47_RS03655;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=CCO47_RS03655;old_locus_tag=CCO47_03655 NZ_CP075113.1 Protein Homology CDS 762479 763198 . + 0 ID=cds-WP_000786890.1;Parent=gene-CCO47_RS03655;Dbxref=GenBank:WP_000786890.1;Name=WP_000786890.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=CCO47_RS03655;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786890.1;transl_table=11 NZ_CP075113.1 RefSeq gene 763198 763524 . + . ID=gene-CCO47_RS03660;Name=CCO47_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03660;old_locus_tag=CCO47_03660 NZ_CP075113.1 Protein Homology CDS 763198 763524 . + 0 ID=cds-WP_001107574.1;Parent=gene-CCO47_RS03660;Dbxref=GenBank:WP_001107574.1;Name=WP_001107574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462024.1;locus_tag=CCO47_RS03660;product=YggL family protein;protein_id=WP_001107574.1;transl_table=11 NZ_CP075113.1 RefSeq gene 763574 764293 . + . ID=gene-CCO47_RS03665;Name=CCO47_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03665;old_locus_tag=CCO47_03665 NZ_CP075113.1 Protein Homology CDS 763574 764293 . + 0 ID=cds-WP_000984827.1;Parent=gene-CCO47_RS03665;Dbxref=GenBank:WP_000984827.1;Name=WP_000984827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462023.1;locus_tag=CCO47_RS03665;product=YggN family protein;protein_id=WP_000984827.1;transl_table=11 NZ_CP075113.1 RefSeq gene 764482 765528 . + . ID=gene-CCO47_RS03670;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=CCO47_RS03670;old_locus_tag=CCO47_03670 NZ_CP075113.1 Protein Homology CDS 764482 765528 . + 0 ID=cds-WP_000394189.1;Parent=gene-CCO47_RS03670;Dbxref=GenBank:WP_000394189.1;Name=WP_000394189.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462022.1;locus_tag=CCO47_RS03670;product=L-asparaginase 2;protein_id=WP_000394189.1;transl_table=11 NZ_CP075113.1 RefSeq gene 765661 766668 . + . ID=gene-CCO47_RS03675;Name=CCO47_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03675;old_locus_tag=CCO47_03675 NZ_CP075113.1 Protein Homology CDS 765661 766668 . + 0 ID=cds-WP_000252201.1;Parent=gene-CCO47_RS03675;Dbxref=GenBank:WP_000252201.1;Name=WP_000252201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462021.1;locus_tag=CCO47_RS03675;product=DUF1202 family protein;protein_id=WP_000252201.1;transl_table=11 NZ_CP075113.1 RefSeq gene 766760 767896 . - . ID=gene-CCO47_RS03680;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=CCO47_RS03680;old_locus_tag=CCO47_03680 NZ_CP075113.1 Protein Homology CDS 766760 767896 . - 0 ID=cds-WP_001096516.1;Parent=gene-CCO47_RS03680;Dbxref=GenBank:WP_001096516.1;Name=WP_001096516.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462020.1;locus_tag=CCO47_RS03680;product=radical SAM family heme chaperone HemW;protein_id=WP_001096516.1;transl_table=11 NZ_CP075113.1 RefSeq gene 767889 768482 . - . ID=gene-CCO47_RS03685;Name=CCO47_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03685;old_locus_tag=CCO47_03685 NZ_CP075113.1 Protein Homology CDS 767889 768482 . - 0 ID=cds-WP_001174769.1;Parent=gene-CCO47_RS03685;Dbxref=GenBank:WP_001174769.1;Name=WP_001174769.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462019.1;locus_tag=CCO47_RS03685;product=XTP/dITP diphosphatase;protein_id=WP_001174769.1;transl_table=11 NZ_CP075113.1 RefSeq gene 768490 768780 . - . ID=gene-CCO47_RS03690;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=CCO47_RS03690;old_locus_tag=CCO47_03690 NZ_CP075113.1 Protein Homology CDS 768490 768780 . - 0 ID=cds-WP_001277205.1;Parent=gene-CCO47_RS03690;Dbxref=GenBank:WP_001277205.1;Name=WP_001277205.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462018.1;locus_tag=CCO47_RS03690;product=DUF167 family protein YggU;protein_id=WP_001277205.1;transl_table=11 NZ_CP075113.1 RefSeq gene 768777 769343 . - . ID=gene-CCO47_RS03695;Name=CCO47_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03695;old_locus_tag=CCO47_03695 NZ_CP075113.1 Protein Homology CDS 768777 769343 . - 0 ID=cds-WP_001094848.1;Parent=gene-CCO47_RS03695;Dbxref=GenBank:WP_001094848.1;Name=WP_001094848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=CCO47_RS03695;product=YggT family protein;protein_id=WP_001094848.1;transl_table=11 NZ_CP075113.1 RefSeq gene 769362 770066 . - . ID=gene-CCO47_RS03700;Name=CCO47_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03700;old_locus_tag=CCO47_03700 NZ_CP075113.1 Protein Homology CDS 769362 770066 . - 0 ID=cds-WP_000997812.1;Parent=gene-CCO47_RS03700;Dbxref=GenBank:WP_000997812.1;Name=WP_000997812.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462016.1;locus_tag=CCO47_RS03700;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_000997812.1;transl_table=11 NZ_CP075113.1 RefSeq gene 770084 771064 . + . ID=gene-CCO47_RS03705;Name=CCO47_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03705;old_locus_tag=CCO47_03705 NZ_CP075113.1 Protein Homology CDS 770084 771064 . + 0 ID=cds-WP_001055643.1;Parent=gene-CCO47_RS03705;Dbxref=GenBank:WP_001055643.1;Name=WP_001055643.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462015.1;locus_tag=CCO47_RS03705;product=type IV pilus twitching motility protein PilT;protein_id=WP_001055643.1;transl_table=11 NZ_CP075113.1 RefSeq gene 771197 771883 . + . ID=gene-CCO47_RS03710;Name=CCO47_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03710;old_locus_tag=CCO47_03710 NZ_CP075113.1 Protein Homology CDS 771197 771883 . + 0 ID=cds-WP_000098324.1;Parent=gene-CCO47_RS03710;Dbxref=GenBank:WP_000098324.1;Name=WP_000098324.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462014.1;locus_tag=CCO47_RS03710;product=IclR family transcriptional regulator;protein_id=WP_000098324.1;transl_table=11 NZ_CP075113.1 RefSeq gene 771930 772346 . - . ID=gene-CCO47_RS03715;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=CCO47_RS03715;old_locus_tag=CCO47_03715 NZ_CP075113.1 Protein Homology CDS 771930 772346 . - 0 ID=cds-WP_001285490.1;Parent=gene-CCO47_RS03715;Dbxref=GenBank:WP_001285490.1;Name=WP_001285490.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462013.1;locus_tag=CCO47_RS03715;product=Holliday junction resolvase RuvX;protein_id=WP_001285490.1;transl_table=11 NZ_CP075113.1 RefSeq gene 772346 772909 . - . ID=gene-CCO47_RS03720;Name=CCO47_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03720;old_locus_tag=CCO47_03720 NZ_CP075113.1 Protein Homology CDS 772346 772909 . - 0 ID=cds-WP_001053173.1;Parent=gene-CCO47_RS03720;Dbxref=GenBank:WP_001053173.1;Name=WP_001053173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=CCO47_RS03720;product=YqgE/AlgH family protein;protein_id=WP_001053173.1;transl_table=11 NZ_CP075113.1 RefSeq gene 773125 774072 . - . ID=gene-CCO47_RS03725;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=CCO47_RS03725;old_locus_tag=CCO47_03725 NZ_CP075113.1 Protein Homology CDS 773125 774072 . - 0 ID=cds-WP_000593252.1;Parent=gene-CCO47_RS03725;Dbxref=GenBank:WP_000593252.1;Name=WP_000593252.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=CCO47_RS03725;product=glutathione synthase;protein_id=WP_000593252.1;transl_table=11 NZ_CP075113.1 RefSeq gene 774092 774823 . - . ID=gene-CCO47_RS03730;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=CCO47_RS03730;old_locus_tag=CCO47_03730 NZ_CP075113.1 Protein Homology CDS 774092 774823 . - 0 ID=cds-WP_001675718.1;Parent=gene-CCO47_RS03730;Dbxref=GenBank:WP_001675718.1;Name=WP_001675718.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=CCO47_RS03730;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001675718.1;transl_table=11 NZ_CP075113.1 RefSeq gene 774900 775607 . - . ID=gene-CCO47_RS03735;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=CCO47_RS03735;old_locus_tag=CCO47_03735 NZ_CP075113.1 Protein Homology CDS 774900 775607 . - 0 ID=cds-WP_000286124.1;Parent=gene-CCO47_RS03735;Dbxref=GenBank:WP_000286124.1;Name=WP_000286124.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462009.1;locus_tag=CCO47_RS03735;product=deoxyribonuclease I;protein_id=WP_000286124.1;transl_table=11 NZ_CP075113.1 RefSeq gene 775703 776200 . - . ID=gene-CCO47_RS03740;Name=CCO47_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03740;old_locus_tag=CCO47_03740 NZ_CP075113.1 Protein Homology CDS 775703 776200 . - 0 ID=cds-WP_000856775.1;Parent=gene-CCO47_RS03740;Dbxref=GenBank:WP_000856775.1;Name=WP_000856775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462008.1;locus_tag=CCO47_RS03740;product=SprT family zinc-dependent metalloprotease;protein_id=WP_000856775.1;transl_table=11 NZ_CP075113.1 RefSeq gene 776279 777673 . - . ID=gene-CCO47_RS03745;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=CCO47_RS03745;old_locus_tag=CCO47_03745 NZ_CP075113.1 Protein Homology CDS 776279 777673 . - 0 ID=cds-WP_001113171.1;Parent=gene-CCO47_RS03745;Dbxref=GenBank:WP_001113171.1;Name=WP_001113171.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462007.1;locus_tag=CCO47_RS03745;product=galactose/proton symporter;protein_id=WP_001113171.1;transl_table=11 NZ_CP075113.1 RefSeq gene 778166 779320 . - . ID=gene-CCO47_RS03750;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=CCO47_RS03750;old_locus_tag=CCO47_03750 NZ_CP075113.1 Protein Homology CDS 778166 779320 . - 0 ID=cds-WP_001062139.1;Parent=gene-CCO47_RS03750;Dbxref=GenBank:WP_001062139.1;Name=WP_001062139.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=CCO47_RS03750;product=methionine adenosyltransferase;protein_id=WP_001062139.1;transl_table=11 NZ_CP075113.1 RefSeq gene 779376 779675 . + . ID=gene-CCO47_RS03755;Name=CCO47_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03755;old_locus_tag=CCO47_03755 NZ_CP075113.1 GeneMarkS-2+ CDS 779376 779675 . + 0 ID=cds-WP_001576358.1;Parent=gene-CCO47_RS03755;Dbxref=GenBank:WP_001576358.1;Name=WP_001576358.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO47_RS03755;product=hypothetical protein;protein_id=WP_001576358.1;transl_table=11 NZ_CP075113.1 RefSeq gene 779735 779884 . + . ID=gene-CCO47_RS24345;Name=CCO47_RS24345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24345 NZ_CP075113.1 Protein Homology CDS 779735 779884 . + 0 ID=cds-WP_001751809.1;Parent=gene-CCO47_RS24345;Dbxref=GenBank:WP_001751809.1;Name=WP_001751809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=CCO47_RS24345;product=hypothetical protein;protein_id=WP_001751809.1;transl_table=11 NZ_CP075113.1 RefSeq gene 779970 780101 . + . ID=gene-CCO47_RS03765;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=CCO47_RS03765;old_locus_tag=CCO47_03765 NZ_CP075113.1 Protein Homology CDS 779970 780101 . + 0 ID=cds-WP_000729109.1;Parent=gene-CCO47_RS03765;Dbxref=GenBank:WP_000729109.1;Name=WP_000729109.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462003.1;locus_tag=CCO47_RS03765;product=acid stress response protein YqgB;protein_id=WP_000729109.1;transl_table=11 NZ_CP075113.1 RefSeq gene 780110 782086 . + . ID=gene-CCO47_RS03770;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=CCO47_RS03770;old_locus_tag=CCO47_03770 NZ_CP075113.1 Protein Homology CDS 780110 782086 . + 0 ID=cds-WP_001278578.1;Parent=gene-CCO47_RS03770;Dbxref=GenBank:WP_001278578.1;Name=WP_001278578.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462002.1;locus_tag=CCO47_RS03770;product=biosynthetic arginine decarboxylase;protein_id=WP_001278578.1;transl_table=11 NZ_CP075113.1 RefSeq gene 782231 782962 . + . ID=gene-CCO47_RS03775;Name=CCO47_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03775;old_locus_tag=CCO47_03775 NZ_CP075113.1 Protein Homology CDS 782231 782962 . + 0 ID=cds-WP_000032793.1;Parent=gene-CCO47_RS03775;Dbxref=GenBank:WP_000032793.1;Name=WP_000032793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462001.1;locus_tag=CCO47_RS03775;product=hypothetical protein;protein_id=WP_000032793.1;transl_table=11 NZ_CP075113.1 RefSeq gene 783116 783916 . + . ID=gene-CCO47_RS03780;Name=CCO47_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03780;old_locus_tag=CCO47_03780 NZ_CP075113.1 Protein Homology CDS 783116 783916 . + 0 ID=cds-WP_001576357.1;Parent=gene-CCO47_RS03780;Dbxref=GenBank:WP_001576357.1;Name=WP_001576357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462000.3;locus_tag=CCO47_RS03780;product=FadR/GntR family transcriptional regulator;protein_id=WP_001576357.1;transl_table=11 NZ_CP075113.1 RefSeq gene 784231 784299 . - . ID=gene-CCO47_RS24400;Name=CCO47_RS24400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24400 NZ_CP075113.1 Protein Homology CDS 784231 784299 . - 0 ID=cds-WP_001675272.1;Parent=gene-CCO47_RS24400;Dbxref=GenBank:WP_001675272.1;Name=WP_001675272.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014766.7;locus_tag=CCO47_RS24400;product=mandelate racemase;protein_id=WP_001675272.1;transl_table=11 NZ_CP075113.1 RefSeq gene 785139 786611 . + . ID=gene-CCO47_RS03790;Name=CCO47_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03790;old_locus_tag=CCO47_03790 NZ_CP075113.1 Protein Homology CDS 785139 786611 . + 0 ID=cds-WP_000379525.1;Parent=gene-CCO47_RS03790;Dbxref=GenBank:WP_000379525.1;Name=WP_000379525.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461999.1;locus_tag=CCO47_RS03790;product=mannitol dehydrogenase family protein;protein_id=WP_000379525.1;transl_table=11 NZ_CP075113.1 RefSeq gene 786614 787630 . + . ID=gene-CCO47_RS03795;Name=CCO47_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03795;old_locus_tag=CCO47_03795 NZ_CP075113.1 Protein Homology CDS 786614 787630 . + 0 ID=cds-WP_000853908.1;Parent=gene-CCO47_RS03795;Dbxref=GenBank:WP_000853908.1;Name=WP_000853908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461998.1;locus_tag=CCO47_RS03795;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_000853908.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 787644 788651 . + . ID=gene-CCO47_RS03800;Name=CCO47_RS03800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS03800;old_locus_tag=CCO47_03800;pseudo=true NZ_CP075113.1 Protein Homology CDS 787644 788651 . + 0 ID=cds-CCO47_RS03800;Parent=gene-CCO47_RS03800;Note=internal stop;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461997.1;locus_tag=CCO47_RS03800;product=Ldh family oxidoreductase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 788690 789184 . + . ID=gene-CCO47_RS03805;Name=CCO47_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03805;old_locus_tag=CCO47_03805 NZ_CP075113.1 Protein Homology CDS 788690 789184 . + 0 ID=cds-WP_000965537.1;Parent=gene-CCO47_RS03805;Dbxref=GenBank:WP_000965537.1;Name=WP_000965537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001839091.1;locus_tag=CCO47_RS03805;product=NanQ anomerase/TabA/YiaL family protein;protein_id=WP_000965537.1;transl_table=11 NZ_CP075113.1 RefSeq gene 789377 790333 . + . ID=gene-CCO47_RS03810;Name=CCO47_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03810;old_locus_tag=CCO47_03810 NZ_CP075113.1 Protein Homology CDS 789377 790333 . + 0 ID=cds-WP_077906644.1;Parent=gene-CCO47_RS03810;Dbxref=GenBank:WP_077906644.1;Name=WP_077906644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461995.3;locus_tag=CCO47_RS03810;product=alpha/beta fold hydrolase;protein_id=WP_077906644.1;transl_table=11 NZ_CP075113.1 RefSeq gene 790537 791457 . + . ID=gene-CCO47_RS03815;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=CCO47_RS03815;old_locus_tag=CCO47_03815 NZ_CP075113.1 Protein Homology CDS 790537 791457 . + 0 ID=cds-WP_000105553.1;Parent=gene-CCO47_RS03815;Dbxref=GenBank:WP_000105553.1;Name=WP_000105553.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461994.1;locus_tag=CCO47_RS03815;product=agmatinase;protein_id=WP_000105553.1;transl_table=11 NZ_CP075113.1 RefSeq gene 791558 792316 . - . ID=gene-CCO47_RS03820;Name=loiP;gbkey=Gene;gene=loiP;gene_biotype=protein_coding;locus_tag=CCO47_RS03820;old_locus_tag=CCO47_03820 NZ_CP075113.1 Protein Homology CDS 791558 792316 . - 0 ID=cds-WP_000701824.1;Parent=gene-CCO47_RS03820;Dbxref=GenBank:WP_000701824.1;Name=WP_000701824.1;Ontology_term=GO:0004222;gbkey=CDS;gene=loiP;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=CCO47_RS03820;product=metalloprotease LoiP;protein_id=WP_000701824.1;transl_table=11 NZ_CP075113.1 RefSeq gene 792592 794583 . + . ID=gene-CCO47_RS03825;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=CCO47_RS03825;old_locus_tag=CCO47_03825 NZ_CP075113.1 Protein Homology CDS 792592 794583 . + 0 ID=cds-WP_000098644.1;Parent=gene-CCO47_RS03825;Dbxref=GenBank:WP_000098644.1;Name=WP_000098644.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461992.1;locus_tag=CCO47_RS03825;product=transketolase;protein_id=WP_000098644.1;transl_table=11 NZ_CP075113.1 RefSeq gene 794627 795283 . - . ID=gene-CCO47_RS03830;Name=CCO47_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03830;old_locus_tag=CCO47_03830 NZ_CP075113.1 Protein Homology CDS 794627 795283 . - 0 ID=cds-WP_000956921.1;Parent=gene-CCO47_RS03830;Dbxref=GenBank:WP_000956921.1;Name=WP_000956921.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461991.1;locus_tag=CCO47_RS03830;product=ABC transporter ATP-binding protein;protein_id=WP_000956921.1;transl_table=11 NZ_CP075113.1 RefSeq gene 795277 795954 . - . ID=gene-CCO47_RS03835;Name=CCO47_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03835;old_locus_tag=CCO47_03835 NZ_CP075113.1 Protein Homology CDS 795277 795954 . - 0 ID=cds-WP_001675720.1;Parent=gene-CCO47_RS03835;Dbxref=GenBank:WP_001675720.1;Name=WP_001675720.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461990.1;locus_tag=CCO47_RS03835;product=ABC transporter ATP-binding protein;protein_id=WP_001675720.1;transl_table=11 NZ_CP075113.1 RefSeq gene 795942 796649 . - . ID=gene-CCO47_RS03840;Name=CCO47_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03840;old_locus_tag=CCO47_03840 NZ_CP075113.1 Protein Homology CDS 795942 796649 . - 0 ID=cds-WP_000553258.1;Parent=gene-CCO47_RS03840;Dbxref=GenBank:WP_000553258.1;Name=WP_000553258.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=CCO47_RS03840;product=energy-coupling factor transporter transmembrane component T;protein_id=WP_000553258.1;transl_table=11 NZ_CP075113.1 RefSeq gene 796650 797228 . - . ID=gene-CCO47_RS03845;Name=CCO47_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03845;old_locus_tag=CCO47_03845 NZ_CP075113.1 Protein Homology CDS 796650 797228 . - 0 ID=cds-WP_000124001.1;Parent=gene-CCO47_RS03845;Dbxref=GenBank:WP_000124001.1;Name=WP_000124001.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461988.1;locus_tag=CCO47_RS03845;product=ECF transporter S component;protein_id=WP_000124001.1;transl_table=11 NZ_CP075113.1 RefSeq gene 797254 797679 . - . ID=gene-CCO47_RS03850;Name=CCO47_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03850;old_locus_tag=CCO47_03850 NZ_CP075113.1 Protein Homology CDS 797254 797679 . - 0 ID=cds-WP_000218564.1;Parent=gene-CCO47_RS03850;Dbxref=GenBank:WP_000218564.1;Name=WP_000218564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461987.1;locus_tag=CCO47_RS03850;product=PPC domain-containing DNA-binding protein;protein_id=WP_000218564.1;transl_table=11 NZ_CP075113.1 RefSeq gene 798053 799099 . + . ID=gene-CCO47_RS03855;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=CCO47_RS03855;old_locus_tag=CCO47_03855 NZ_CP075113.1 Protein Homology CDS 798053 799099 . + 0 ID=cds-WP_000218333.1;Parent=gene-CCO47_RS03855;Dbxref=GenBank:WP_000218333.1;Name=WP_000218333.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461986.1;locus_tag=CCO47_RS03855;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_000218333.1;transl_table=11 NZ_CP075113.1 RefSeq gene 799121 800284 . + . ID=gene-CCO47_RS03860;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=CCO47_RS03860;old_locus_tag=CCO47_03860 NZ_CP075113.1 Protein Homology CDS 799121 800284 . + 0 ID=cds-WP_000111274.1;Parent=gene-CCO47_RS03860;Dbxref=GenBank:WP_000111274.1;Name=WP_000111274.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=CCO47_RS03860;product=phosphoglycerate kinase;protein_id=WP_000111274.1;transl_table=11 NZ_CP075113.1 RefSeq gene 800386 801465 . + . ID=gene-CCO47_RS03865;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=CCO47_RS03865;old_locus_tag=CCO47_03865 NZ_CP075113.1 Protein Homology CDS 800386 801465 . + 0 ID=cds-WP_000034386.1;Parent=gene-CCO47_RS03865;Dbxref=GenBank:WP_000034386.1;Name=WP_000034386.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=CCO47_RS03865;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034386.1;transl_table=11 NZ_CP075113.1 RefSeq gene 801698 802558 . + . ID=gene-CCO47_RS03870;Name=CCO47_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03870;old_locus_tag=CCO47_03870 NZ_CP075113.1 Protein Homology CDS 801698 802558 . + 0 ID=cds-WP_000389833.1;Parent=gene-CCO47_RS03870;Dbxref=GenBank:WP_000389833.1;Name=WP_000389833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461983.1;locus_tag=CCO47_RS03870;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000389833.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 802759 803393 . + . ID=gene-CCO47_RS03875;Name=argO;gbkey=Gene;gene=argO;gene_biotype=pseudogene;locus_tag=CCO47_RS03875;old_locus_tag=CCO47_03875;pseudo=true NZ_CP075113.1 Protein Homology CDS 802759 803393 . + 0 ID=cds-CCO47_RS03875;Parent=gene-CCO47_RS03875;Note=frameshifted;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=CCO47_RS03875;product=arginine exporter ArgO;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 803487 804233 . + . ID=gene-CCO47_RS03880;Name=CCO47_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03880;old_locus_tag=CCO47_03880 NZ_CP075113.1 Protein Homology CDS 803487 804233 . + 0 ID=cds-WP_000669854.1;Parent=gene-CCO47_RS03880;Dbxref=GenBank:WP_000669854.1;Name=WP_000669854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461981.1;locus_tag=CCO47_RS03880;product=oxidative stress defense protein;protein_id=WP_000669854.1;transl_table=11 NZ_CP075113.1 RefSeq gene 804499 805392 . - . ID=gene-CCO47_RS03885;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=CCO47_RS03885;old_locus_tag=CCO47_03885 NZ_CP075113.1 Protein Homology CDS 804499 805392 . - 0 ID=cds-WP_000828348.1;Parent=gene-CCO47_RS03885;Dbxref=GenBank:WP_000828348.1;Name=WP_000828348.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461980.1;locus_tag=CCO47_RS03885;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828348.1;transl_table=11 NZ_CP075113.1 RefSeq gene 805546 806205 . + . ID=gene-CCO47_RS03890;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=CCO47_RS03890;old_locus_tag=CCO47_03890 NZ_CP075113.1 Protein Homology CDS 805546 806205 . + 0 ID=cds-WP_000189741.1;Parent=gene-CCO47_RS03890;Dbxref=GenBank:WP_000189741.1;Name=WP_000189741.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461979.1;locus_tag=CCO47_RS03890;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000189741.1;transl_table=11 NZ_CP075113.1 RefSeq gene 806472 807704 . + . ID=gene-CCO47_RS03895;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=CCO47_RS03895;old_locus_tag=CCO47_03895 NZ_CP075113.1 Protein Homology CDS 806472 807704 . + 0 ID=cds-WP_001151628.1;Parent=gene-CCO47_RS03895;Dbxref=GenBank:WP_001151628.1;Name=WP_001151628.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=CCO47_RS03895;product=phosphoglycerate dehydrogenase;protein_id=WP_001151628.1;transl_table=11 NZ_CP075113.1 RefSeq gene 808085 808681 . - . ID=gene-CCO47_RS03900;Name=CCO47_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03900;old_locus_tag=CCO47_03900 NZ_CP075113.1 Protein Homology CDS 808085 808681 . - 0 ID=cds-WP_001574944.1;Parent=gene-CCO47_RS03900;Dbxref=GenBank:WP_001574944.1;Name=WP_001574944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=CCO47_RS03900;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_001574944.1;transl_table=11 NZ_CP075113.1 RefSeq gene 808702 808885 . - . ID=gene-CCO47_RS03905;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=CCO47_RS03905;old_locus_tag=CCO47_03905 NZ_CP075113.1 cmsearch ncRNA 808702 808885 . - . ID=rna-CCO47_RS03905;Parent=gene-CCO47_RS03905;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS03905;product=6S RNA NZ_CP075113.1 cmsearch exon 808702 808885 . - . ID=exon-CCO47_RS03905-1;Parent=rna-CCO47_RS03905;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS03905;product=6S RNA NZ_CP075113.1 RefSeq gene 808927 809256 . - . ID=gene-CCO47_RS03910;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=CCO47_RS03910;old_locus_tag=CCO47_03910 NZ_CP075113.1 Protein Homology CDS 808927 809256 . - 0 ID=cds-WP_001276011.1;Parent=gene-CCO47_RS03910;Dbxref=GenBank:WP_001276011.1;Name=WP_001276011.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=CCO47_RS03910;product=cell division protein ZapA;protein_id=WP_001276011.1;transl_table=11 NZ_CP075113.1 RefSeq gene 809423 810001 . + . ID=gene-CCO47_RS03915;Name=CCO47_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03915;old_locus_tag=CCO47_03915 NZ_CP075113.1 Protein Homology CDS 809423 810001 . + 0 ID=cds-WP_000027236.1;Parent=gene-CCO47_RS03915;Dbxref=GenBank:WP_000027236.1;Name=WP_000027236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=CCO47_RS03915;product=YecA/YgfB family protein;protein_id=WP_000027236.1;transl_table=11 NZ_CP075113.1 RefSeq gene 810027 811343 . + . ID=gene-CCO47_RS03920;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=CCO47_RS03920;old_locus_tag=CCO47_03920 NZ_CP075113.1 Protein Homology CDS 810027 811343 . + 0 ID=cds-WP_000193688.1;Parent=gene-CCO47_RS03920;Dbxref=GenBank:WP_000193688.1;Name=WP_000193688.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461974.1;locus_tag=CCO47_RS03920;product=Xaa-Pro aminopeptidase;protein_id=WP_000193688.1;transl_table=11 NZ_CP075113.1 RefSeq gene 811340 812518 . + . ID=gene-CCO47_RS03925;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=CCO47_RS03925;old_locus_tag=CCO47_03925 NZ_CP075113.1 Protein Homology CDS 811340 812518 . + 0 ID=cds-WP_000111149.1;Parent=gene-CCO47_RS03925;Dbxref=GenBank:WP_000111149.1;Name=WP_000111149.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461973.2;locus_tag=CCO47_RS03925;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_000111149.1;transl_table=11 NZ_CP075113.1 RefSeq gene 812644 813846 . + . ID=gene-CCO47_RS03930;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=CCO47_RS03930;old_locus_tag=CCO47_03930 NZ_CP075113.1 Protein Homology CDS 812644 813846 . + 0 ID=cds-WP_001192149.1;Parent=gene-CCO47_RS03930;Dbxref=GenBank:WP_001192149.1;Name=WP_001192149.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=CCO47_RS03930;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_001192149.1;transl_table=11 NZ_CP075113.1 RefSeq gene 814302 815396 . + . ID=gene-CCO47_RS03935;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=CCO47_RS03935;old_locus_tag=CCO47_03935 NZ_CP075113.1 Protein Homology CDS 814302 815396 . + 0 ID=cds-WP_000068730.1;Parent=gene-CCO47_RS03935;Dbxref=GenBank:WP_000068730.1;Name=WP_000068730.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461971.1;locus_tag=CCO47_RS03935;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_000068730.1;transl_table=11 NZ_CP075113.1 RefSeq gene 815422 815811 . + . ID=gene-CCO47_RS03940;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=CCO47_RS03940;old_locus_tag=CCO47_03940 NZ_CP075113.1 Protein Homology CDS 815422 815811 . + 0 ID=cds-WP_001295377.1;Parent=gene-CCO47_RS03940;Dbxref=GenBank:WP_001295377.1;Name=WP_001295377.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=CCO47_RS03940;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11 NZ_CP075113.1 RefSeq gene 815974 818847 . + . ID=gene-CCO47_RS03945;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=CCO47_RS03945;old_locus_tag=CCO47_03945 NZ_CP075113.1 Protein Homology CDS 815974 818847 . + 0 ID=cds-WP_000194966.1;Parent=gene-CCO47_RS03945;Dbxref=GenBank:WP_000194966.1;Name=WP_000194966.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=CCO47_RS03945;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_000194966.1;transl_table=11 NZ_CP075113.1 RefSeq gene 819303 820196 . + . ID=gene-CCO47_RS03950;Name=CCO47_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03950;old_locus_tag=CCO47_03950 NZ_CP075113.1 Protein Homology CDS 819303 820196 . + 0 ID=cds-WP_000819375.1;Parent=gene-CCO47_RS03950;Dbxref=GenBank:WP_000819375.1;Name=WP_000819375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461968.1;locus_tag=CCO47_RS03950;product=transporter;protein_id=WP_000819375.1;transl_table=11 NZ_CP075113.1 RefSeq gene 820244 821677 . - . ID=gene-CCO47_RS03955;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=CCO47_RS03955;old_locus_tag=CCO47_03955 NZ_CP075113.1 Protein Homology CDS 820244 821677 . - 0 ID=cds-WP_001230141.1;Parent=gene-CCO47_RS03955;Dbxref=GenBank:WP_001230141.1;Name=WP_001230141.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=CCO47_RS03955;product=6-phospho-beta-glucosidase BglA;protein_id=WP_001230141.1;transl_table=11 NZ_CP075113.1 RefSeq gene 821832 822146 . + . ID=gene-CCO47_RS03960;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=CCO47_RS03960;old_locus_tag=CCO47_03960 NZ_CP075113.1 Protein Homology CDS 821832 822146 . + 0 ID=cds-WP_001182980.1;Parent=gene-CCO47_RS03960;Dbxref=GenBank:WP_001182980.1;Name=WP_001182980.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001182980.1;locus_tag=CCO47_RS03960;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_001182980.1;transl_table=11 NZ_CP075113.1 RefSeq gene 822308 822967 . + . ID=gene-CCO47_RS03965;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=CCO47_RS03965;old_locus_tag=CCO47_03965 NZ_CP075113.1 Protein Homology CDS 822308 822967 . + 0 ID=cds-WP_000250289.1;Parent=gene-CCO47_RS03965;Dbxref=GenBank:WP_000250289.1;Name=WP_000250289.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461965.1;locus_tag=CCO47_RS03965;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_000250289.1;transl_table=11 NZ_CP075113.1 RefSeq gene 823083 824063 . - . ID=gene-CCO47_RS03970;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=CCO47_RS03970;old_locus_tag=CCO47_03970 NZ_CP075113.1 Protein Homology CDS 823083 824063 . - 0 ID=cds-WP_000874174.1;Parent=gene-CCO47_RS03970;Dbxref=GenBank:WP_000874174.1;Name=WP_000874174.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461964.1;locus_tag=CCO47_RS03970;product=tRNA-modifying protein YgfZ;protein_id=WP_000874174.1;transl_table=11 NZ_CP075113.1 RefSeq gene 824313 824579 . + . ID=gene-CCO47_RS03975;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=CCO47_RS03975;old_locus_tag=CCO47_03975 NZ_CP075113.1 Protein Homology CDS 824313 824579 . + 0 ID=cds-WP_000351186.1;Parent=gene-CCO47_RS03975;Dbxref=GenBank:WP_000351186.1;Name=WP_000351186.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=CCO47_RS03975;product=FAD assembly factor SdhE;protein_id=WP_000351186.1;transl_table=11 NZ_CP075113.1 RefSeq gene 824560 824973 . + . ID=gene-CCO47_RS03980;Name=CCO47_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS03980;old_locus_tag=CCO47_03980 NZ_CP075113.1 Protein Homology CDS 824560 824973 . + 0 ID=cds-WP_000244756.1;Parent=gene-CCO47_RS03980;Dbxref=GenBank:WP_000244756.1;Name=WP_000244756.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=CCO47_RS03980;product=protein YgfX;protein_id=WP_000244756.1;transl_table=11 NZ_CP075113.1 RefSeq gene 825026 825547 . - . ID=gene-CCO47_RS03985;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=CCO47_RS03985;old_locus_tag=CCO47_03985 NZ_CP075113.1 Protein Homology CDS 825026 825547 . - 0 ID=cds-WP_001055885.1;Parent=gene-CCO47_RS03985;Dbxref=GenBank:WP_001055885.1;Name=WP_001055885.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461961.1;locus_tag=CCO47_RS03985;product=flavodoxin FldB;protein_id=WP_001055885.1;transl_table=11 NZ_CP075113.1 RefSeq gene 825660 826556 . + . ID=gene-CCO47_RS03990;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=CCO47_RS03990;old_locus_tag=CCO47_03990 NZ_CP075113.1 Protein Homology CDS 825660 826556 . + 0 ID=cds-WP_000434302.1;Parent=gene-CCO47_RS03990;Dbxref=GenBank:WP_000434302.1;Name=WP_000434302.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461960.1;locus_tag=CCO47_RS03990;product=site-specific tyrosine recombinase XerD;protein_id=WP_000434302.1;transl_table=11 NZ_CP075113.1 RefSeq gene 826580 827293 . + . ID=gene-CCO47_RS03995;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=CCO47_RS03995;old_locus_tag=CCO47_03995 NZ_CP075113.1 Protein Homology CDS 826580 827293 . + 0 ID=cds-WP_000745614.1;Parent=gene-CCO47_RS03995;Dbxref=GenBank:WP_000745614.1;Name=WP_000745614.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461959.1;locus_tag=CCO47_RS03995;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000745614.1;transl_table=11 NZ_CP075113.1 RefSeq gene 827299 829032 . + . ID=gene-CCO47_RS04000;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=CCO47_RS04000;old_locus_tag=CCO47_04000 NZ_CP075113.1 Protein Homology CDS 827299 829032 . + 0 ID=cds-WP_000813387.1;Parent=gene-CCO47_RS04000;Dbxref=GenBank:WP_000813387.1;Name=WP_000813387.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461958.1;locus_tag=CCO47_RS04000;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_000813387.1;transl_table=11 NZ_CP075113.1 RefSeq gene 829137 830235 . + . ID=gene-CCO47_RS04005;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=CCO47_RS04005;old_locus_tag=CCO47_04005 NZ_CP075113.1 Protein Homology CDS 829137 829211 . + 0 ID=cds-WP_010989230.1;Parent=gene-CCO47_RS04005;Dbxref=GenBank:WP_010989230.1;Name=WP_010989230.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=CCO47_RS04005;product=peptide chain release factor 2;protein_id=WP_010989230.1;transl_table=11 NZ_CP075113.1 Protein Homology CDS 829213 830235 . + 0 ID=cds-WP_010989230.1;Parent=gene-CCO47_RS04005;Dbxref=GenBank:WP_010989230.1;Name=WP_010989230.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=CCO47_RS04005;product=peptide chain release factor 2;protein_id=WP_010989230.1;transl_table=11 NZ_CP075113.1 RefSeq gene 830245 831762 . + . ID=gene-CCO47_RS04010;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=CCO47_RS04010;old_locus_tag=CCO47_04010 NZ_CP075113.1 Protein Homology CDS 830245 831762 . + 0 ID=cds-WP_000003339.1;Parent=gene-CCO47_RS04010;Dbxref=GenBank:WP_000003339.1;Name=WP_000003339.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=CCO47_RS04010;product=lysine--tRNA ligase;protein_id=WP_000003339.1;transl_table=11 NZ_CP075113.1 RefSeq gene 831838 832383 . - . ID=gene-CCO47_RS04015;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=CCO47_RS04015;old_locus_tag=CCO47_04015 NZ_CP075113.1 Protein Homology CDS 831838 832383 . - 0 ID=cds-WP_000133994.1;Parent=gene-CCO47_RS04015;Dbxref=GenBank:WP_000133994.1;Name=WP_000133994.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461955.1;locus_tag=CCO47_RS04015;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_000133994.1;transl_table=11 NZ_CP075113.1 RefSeq gene 832648 833406 . + . ID=gene-CCO47_RS04020;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=CCO47_RS04020;old_locus_tag=CCO47_04020 NZ_CP075113.1 Protein Homology CDS 832648 833406 . + 0 ID=cds-WP_000244328.1;Parent=gene-CCO47_RS04020;Dbxref=GenBank:WP_000244328.1;Name=WP_000244328.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=CCO47_RS04020;product=amidase activator ActS;protein_id=WP_000244328.1;transl_table=11 NZ_CP075113.1 RefSeq gene 833486 833559 . + . ID=gene-CCO47_RS04025;Name=CCO47_RS04025;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS04025;old_locus_tag=CCO47_04025 NZ_CP075113.1 tRNAscan-SE tRNA 833486 833559 . + . ID=rna-CCO47_RS04025;Parent=gene-CCO47_RS04025;anticodon=(pos:833518..833520);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS04025;product=tRNA-Gly NZ_CP075113.1 tRNAscan-SE exon 833486 833559 . + . ID=exon-CCO47_RS04025-1;Parent=rna-CCO47_RS04025;anticodon=(pos:833518..833520);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS04025;product=tRNA-Gly NZ_CP075113.1 RefSeq gene 833691 834497 . - . ID=gene-CCO47_RS04030;Name=CCO47_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04030;old_locus_tag=CCO47_04030 NZ_CP075113.1 Protein Homology CDS 833691 834497 . - 0 ID=cds-WP_001574939.1;Parent=gene-CCO47_RS04030;Dbxref=GenBank:WP_001574939.1;Name=WP_001574939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461953.1;locus_tag=CCO47_RS04030;product=DUF1460 domain-containing protein;protein_id=WP_001574939.1;transl_table=11 NZ_CP075113.1 RefSeq gene 834777 835028 . - . ID=gene-CCO47_RS04035;Name=CCO47_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04035;old_locus_tag=CCO47_04035 NZ_CP075113.1 Protein Homology CDS 834777 835028 . - 0 ID=cds-WP_001576352.1;Parent=gene-CCO47_RS04035;Dbxref=GenBank:WP_001576352.1;Name=WP_001576352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449411.1;locus_tag=CCO47_RS04035;product=phospholipase D-like domain-containing protein;protein_id=WP_001576352.1;transl_table=11 NZ_CP075113.1 RefSeq gene 835237 835464 . + . ID=gene-CCO47_RS04040;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=CCO47_RS04040;old_locus_tag=CCO47_04040 NZ_CP075113.1 Protein Homology CDS 835237 835464 . + 0 ID=cds-WP_000557549.1;Parent=gene-CCO47_RS04040;Dbxref=GenBank:WP_000557549.1;Name=WP_000557549.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461951.1;locus_tag=CCO47_RS04040;product=toxin-antitoxin system antitoxin VapB;protein_id=WP_000557549.1;transl_table=11 NZ_CP075113.1 RefSeq gene 835464 835862 . + . ID=gene-CCO47_RS04045;Name=vapC;gbkey=Gene;gene=vapC;gene_biotype=protein_coding;locus_tag=CCO47_RS04045;old_locus_tag=CCO47_04045 NZ_CP075113.1 Protein Homology CDS 835464 835862 . + 0 ID=cds-WP_000911336.1;Parent=gene-CCO47_RS04045;Dbxref=GenBank:WP_000911336.1;Name=WP_000911336.1;gbkey=CDS;gene=vapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461950.1;locus_tag=CCO47_RS04045;product=tRNA(fMet)-specific endonuclease VapC;protein_id=WP_000911336.1;transl_table=11 NZ_CP075113.1 RefSeq gene 836670 837206 . + . ID=gene-CCO47_RS04050;Name=CCO47_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04050;old_locus_tag=CCO47_04050 NZ_CP075113.1 Protein Homology CDS 836670 837206 . + 0 ID=cds-WP_001038502.1;Parent=gene-CCO47_RS04050;Dbxref=GenBank:WP_001038502.1;Name=WP_001038502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461948.1;locus_tag=CCO47_RS04050;product=STM3031 family outer membrane protein;protein_id=WP_001038502.1;transl_table=11 NZ_CP075113.1 RefSeq gene 837253 837885 . + . ID=gene-CCO47_RS04055;Name=CCO47_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04055;old_locus_tag=CCO47_04055 NZ_CP075113.1 Protein Homology CDS 837253 837885 . + 0 ID=cds-WP_000835265.1;Parent=gene-CCO47_RS04055;Dbxref=GenBank:WP_000835265.1;Name=WP_000835265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461947.1;locus_tag=CCO47_RS04055;product=YfdX family protein;protein_id=WP_000835265.1;transl_table=11 NZ_CP075113.1 RefSeq gene 838604 839185 . + . ID=gene-CCO47_RS04060;Name=CCO47_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04060;old_locus_tag=CCO47_04060 NZ_CP075113.1 Protein Homology CDS 838604 839185 . + 0 ID=cds-WP_001244651.1;Parent=gene-CCO47_RS04060;Dbxref=GenBank:WP_001244651.1;Name=WP_001244651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406296.1;locus_tag=CCO47_RS04060;product=fimbrial protein;protein_id=WP_001244651.1;transl_table=11 NZ_CP075113.1 RefSeq gene 839305 841794 . + . ID=gene-CCO47_RS04065;Name=stdB;gbkey=Gene;gene=stdB;gene_biotype=protein_coding;locus_tag=CCO47_RS04065;old_locus_tag=CCO47_04065 NZ_CP075113.1 Protein Homology CDS 839305 841794 . + 0 ID=cds-WP_000705504.1;Parent=gene-CCO47_RS04065;Dbxref=GenBank:WP_000705504.1;Name=WP_000705504.1;gbkey=CDS;gene=stdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461945.1;locus_tag=CCO47_RS04065;product=fimbrial outer membrane usher protein StdB;protein_id=WP_000705504.1;transl_table=11 NZ_CP075113.1 RefSeq gene 841835 842578 . + . ID=gene-CCO47_RS04070;Name=stdC;gbkey=Gene;gene=stdC;gene_biotype=protein_coding;locus_tag=CCO47_RS04070;old_locus_tag=CCO47_04070 NZ_CP075113.1 Protein Homology CDS 841835 842578 . + 0 ID=cds-WP_000798504.1;Parent=gene-CCO47_RS04070;Dbxref=GenBank:WP_000798504.1;Name=WP_000798504.1;gbkey=CDS;gene=stdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461944.1;locus_tag=CCO47_RS04070;product=fimbrial biogenesis chaperone StdC;protein_id=WP_000798504.1;transl_table=11 NZ_CP075113.1 RefSeq gene 842575 843651 . + . ID=gene-CCO47_RS04075;Name=CCO47_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04075;old_locus_tag=CCO47_04075 NZ_CP075113.1 Protein Homology CDS 842575 843651 . + 0 ID=cds-WP_094912426.1;Parent=gene-CCO47_RS04075;Dbxref=GenBank:WP_094912426.1;Name=WP_094912426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461943.1;locus_tag=CCO47_RS04075;product=hypothetical protein;protein_id=WP_094912426.1;transl_table=11 NZ_CP075113.1 RefSeq gene 843795 844307 . + . ID=gene-CCO47_RS04080;Name=CCO47_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04080;old_locus_tag=CCO47_04080 NZ_CP075113.1 Protein Homology CDS 843795 844307 . + 0 ID=cds-WP_000336258.1;Parent=gene-CCO47_RS04080;Dbxref=GenBank:WP_000336258.1;Name=WP_000336258.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727965.1;locus_tag=CCO47_RS04080;product=CaiF/GrlA family transcriptional regulator;protein_id=WP_000336258.1;transl_table=11 NZ_CP075113.1 RefSeq gene 844294 845052 . + . ID=gene-CCO47_RS04085;Name=CCO47_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04085;old_locus_tag=CCO47_04085 NZ_CP075113.1 Protein Homology CDS 844294 845052 . + 0 ID=cds-WP_000134794.1;Parent=gene-CCO47_RS04085;Dbxref=GenBank:WP_000134794.1;Name=WP_000134794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461942.1;locus_tag=CCO47_RS04085;product=transcriptional regulator;protein_id=WP_000134794.1;transl_table=11 NZ_CP075113.1 RefSeq gene 845262 846152 . - . ID=gene-CCO47_RS04090;Name=CCO47_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04090;old_locus_tag=CCO47_04090 NZ_CP075113.1 Protein Homology CDS 845262 846152 . - 0 ID=cds-WP_001747399.1;Parent=gene-CCO47_RS04090;Dbxref=GenBank:WP_001747399.1;Name=WP_001747399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461941.1;locus_tag=CCO47_RS04090;product=nickel/cobalt efflux protein RcnA;protein_id=WP_001747399.1;transl_table=11 NZ_CP075113.1 RefSeq gene 846273 846545 . + . ID=gene-CCO47_RS04095;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=CCO47_RS04095;old_locus_tag=CCO47_04095 NZ_CP075113.1 Protein Homology CDS 846273 846545 . + 0 ID=cds-WP_000019953.1;Parent=gene-CCO47_RS04095;Dbxref=GenBank:WP_000019953.1;Name=WP_000019953.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461940.1;locus_tag=CCO47_RS04095;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_000019953.1;transl_table=11 NZ_CP075113.1 RefSeq gene 846576 847805 . - . ID=gene-CCO47_RS04100;Name=CCO47_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04100;old_locus_tag=CCO47_04100 NZ_CP075113.1 Protein Homology CDS 846576 847805 . - 0 ID=cds-WP_000036836.1;Parent=gene-CCO47_RS04100;Dbxref=GenBank:WP_000036836.1;Name=WP_000036836.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461939.1;locus_tag=CCO47_RS04100;product=amino acid permease;protein_id=WP_000036836.1;transl_table=11 NZ_CP075113.1 RefSeq gene 847947 848402 . - . ID=gene-CCO47_RS04105;Name=CCO47_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04105;old_locus_tag=CCO47_04105 NZ_CP075113.1 Protein Homology CDS 847947 848402 . - 0 ID=cds-WP_001574932.1;Parent=gene-CCO47_RS04105;Dbxref=GenBank:WP_001574932.1;Name=WP_001574932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465480.1;locus_tag=CCO47_RS04105;product=multidrug/biocide efflux PACE transporter;protein_id=WP_001574932.1;transl_table=11 NZ_CP075113.1 RefSeq gene 848506 849369 . + . ID=gene-CCO47_RS04110;Name=CCO47_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04110;old_locus_tag=CCO47_04110 NZ_CP075113.1 Protein Homology CDS 848506 849369 . + 0 ID=cds-WP_001270781.1;Parent=gene-CCO47_RS04110;Dbxref=GenBank:WP_001270781.1;Name=WP_001270781.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461937.1;locus_tag=CCO47_RS04110;product=LysR family transcriptional regulator;protein_id=WP_001270781.1;transl_table=11 NZ_CP075113.1 RefSeq gene 849492 850670 . + . ID=gene-CCO47_RS04115;Name=CCO47_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04115;old_locus_tag=CCO47_04115 NZ_CP075113.1 Protein Homology CDS 849492 850670 . + 0 ID=cds-WP_000665980.1;Parent=gene-CCO47_RS04115;Dbxref=GenBank:WP_000665980.1;Name=WP_000665980.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461936.1;locus_tag=CCO47_RS04115;product=acetyl-CoA C-acetyltransferase;protein_id=WP_000665980.1;transl_table=11 NZ_CP075113.1 RefSeq gene 851100 851936 . + . ID=gene-CCO47_RS04120;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=CCO47_RS04120;old_locus_tag=CCO47_04120 NZ_CP075113.1 Protein Homology CDS 851100 851936 . + 0 ID=cds-WP_000383274.1;Parent=gene-CCO47_RS04120;Dbxref=GenBank:WP_000383274.1;Name=WP_000383274.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461935.1;locus_tag=CCO47_RS04120;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_000383274.1;transl_table=11 NZ_CP075113.1 RefSeq gene 851993 852754 . + . ID=gene-CCO47_RS04125;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=CCO47_RS04125;old_locus_tag=CCO47_04125 NZ_CP075113.1 Protein Homology CDS 851993 852754 . + 0 ID=cds-WP_000602476.1;Parent=gene-CCO47_RS04125;Dbxref=GenBank:WP_000602476.1;Name=WP_000602476.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461934.1;locus_tag=CCO47_RS04125;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_000602476.1;transl_table=11 NZ_CP075113.1 RefSeq gene 853108 854526 . + . ID=gene-CCO47_RS04130;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=CCO47_RS04130;old_locus_tag=CCO47_04130 NZ_CP075113.1 Protein Homology CDS 853108 854526 . + 0 ID=cds-WP_000253650.1;Parent=gene-CCO47_RS04130;Dbxref=GenBank:WP_000253650.1;Name=WP_000253650.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=CCO47_RS04130;product=arabinose-proton symporter AraE;protein_id=WP_000253650.1;transl_table=11 NZ_CP075113.1 RefSeq gene 854639 855346 . + . ID=gene-CCO47_RS04135;Name=CCO47_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04135;old_locus_tag=CCO47_04135 NZ_CP075113.1 Protein Homology CDS 854639 855346 . + 0 ID=cds-WP_000848629.1;Parent=gene-CCO47_RS04135;Dbxref=GenBank:WP_000848629.1;Name=WP_000848629.1;Ontology_term=GO:0008152,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461932.1;locus_tag=CCO47_RS04135;product=aspartate/glutamate racemase;protein_id=WP_000848629.1;transl_table=11 NZ_CP075113.1 RefSeq gene 855318 856253 . - . ID=gene-CCO47_RS04140;Name=CCO47_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04140;old_locus_tag=CCO47_04140 NZ_CP075113.1 Protein Homology CDS 855318 856253 . - 0 ID=cds-WP_000741798.1;Parent=gene-CCO47_RS04140;Dbxref=GenBank:WP_000741798.1;Name=WP_000741798.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461931.1;locus_tag=CCO47_RS04140;product=LysR family transcriptional regulator;protein_id=WP_000741798.1;transl_table=11 NZ_CP075113.1 RefSeq gene 856371 857633 . + . ID=gene-CCO47_RS04145;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=CCO47_RS04145;old_locus_tag=CCO47_04145 NZ_CP075113.1 Protein Homology CDS 856371 857633 . + 0 ID=cds-WP_000056580.1;Parent=gene-CCO47_RS04145;Dbxref=GenBank:WP_000056580.1;Name=WP_000056580.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=L-lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461930.1;locus_tag=CCO47_RS04145;product=diaminopimelate decarboxylase;protein_id=WP_000056580.1;transl_table=11 NZ_CP075113.1 RefSeq gene 857643 858665 . - . ID=gene-CCO47_RS04150;Name=CCO47_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04150;old_locus_tag=CCO47_04150 NZ_CP075113.1 Protein Homology CDS 857643 858665 . - 0 ID=cds-WP_000968353.1;Parent=gene-CCO47_RS04150;Dbxref=GenBank:WP_000968353.1;Name=WP_000968353.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461929.1;locus_tag=CCO47_RS04150;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000968353.1;transl_table=11 NZ_CP075113.1 RefSeq gene 858676 859704 . - . ID=gene-CCO47_RS04155;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=CCO47_RS04155;old_locus_tag=CCO47_04155 NZ_CP075113.1 Protein Homology CDS 858676 859704 . - 0 ID=cds-WP_000201028.1;Parent=gene-CCO47_RS04155;Dbxref=GenBank:WP_000201028.1;Name=WP_000201028.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461928.1;locus_tag=CCO47_RS04155;product=HTH-type transcriptional regulator GalR;protein_id=WP_000201028.1;transl_table=11 NZ_CP075113.1 RefSeq gene 860297 862456 . + . ID=gene-CCO47_RS04160;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=CCO47_RS04160;old_locus_tag=CCO47_04160 NZ_CP075113.1 Protein Homology CDS 860297 862456 . + 0 ID=cds-WP_000896111.1;Parent=gene-CCO47_RS04160;Dbxref=GenBank:WP_000896111.1;Name=WP_000896111.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=CCO47_RS04160;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_000896111.1;transl_table=11 NZ_CP075113.1 RefSeq gene 862449 863651 . + . ID=gene-CCO47_RS04165;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=CCO47_RS04165;old_locus_tag=CCO47_04165 NZ_CP075113.1 Protein Homology CDS 862449 863651 . + 0 ID=cds-WP_000004686.1;Parent=gene-CCO47_RS04165;Dbxref=GenBank:WP_000004686.1;Name=WP_000004686.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461926.1;locus_tag=CCO47_RS04165;product=lysophospholipid transporter LplT;protein_id=WP_000004686.1;transl_table=11 NZ_CP075113.1 RefSeq gene 863738 864778 . - . ID=gene-CCO47_RS04170;Name=CCO47_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04170;old_locus_tag=CCO47_04170 NZ_CP075113.1 Protein Homology CDS 863738 864778 . - 0 ID=cds-WP_000558960.1;Parent=gene-CCO47_RS04170;Dbxref=GenBank:WP_000558960.1;Name=WP_000558960.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461925.1;locus_tag=CCO47_RS04170;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_000558960.1;transl_table=11 NZ_CP075113.1 RefSeq gene 864969 865187 . - . ID=gene-CCO47_RS04175;Name=CCO47_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04175;old_locus_tag=CCO47_04175 NZ_CP075113.1 Protein Homology CDS 864969 865187 . - 0 ID=cds-WP_000758662.1;Parent=gene-CCO47_RS04175;Dbxref=GenBank:WP_000758662.1;Name=WP_000758662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461924.1;locus_tag=CCO47_RS04175;product=YgdI/YgdR family lipoprotein;protein_id=WP_000758662.1;transl_table=11 NZ_CP075113.1 RefSeq gene 865357 866070 . - . ID=gene-CCO47_RS04180;Name=CCO47_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04180;old_locus_tag=CCO47_04180 NZ_CP075113.1 Protein Homology CDS 865357 866070 . - 0 ID=cds-WP_000895635.1;Parent=gene-CCO47_RS04180;Dbxref=GenBank:WP_000895635.1;Name=WP_000895635.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461923.1;locus_tag=CCO47_RS04180;product=TerC family protein;protein_id=WP_000895635.1;transl_table=11 NZ_CP075113.1 RefSeq gene 866252 866947 . - . ID=gene-CCO47_RS04185;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=CCO47_RS04185;old_locus_tag=CCO47_04185 NZ_CP075113.1 Protein Homology CDS 866252 866947 . - 0 ID=cds-WP_001274930.1;Parent=gene-CCO47_RS04185;Dbxref=GenBank:WP_001274930.1;Name=WP_001274930.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461922.1;locus_tag=CCO47_RS04185;product=DNA mismatch repair endonuclease MutH;protein_id=WP_001274930.1;transl_table=11 NZ_CP075113.1 RefSeq gene 867630 868160 . + . ID=gene-CCO47_RS04190;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=CCO47_RS04190;old_locus_tag=CCO47_04190 NZ_CP075113.1 Protein Homology CDS 867630 868160 . + 0 ID=cds-WP_000564481.1;Parent=gene-CCO47_RS04190;Dbxref=GenBank:WP_000564481.1;Name=WP_000564481.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=CCO47_RS04190;product=RNA pyrophosphohydrolase;protein_id=WP_000564481.1;transl_table=11 NZ_CP075113.1 RefSeq gene 868173 870419 . + . ID=gene-CCO47_RS04195;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=CCO47_RS04195;old_locus_tag=CCO47_04195 NZ_CP075113.1 Protein Homology CDS 868173 870419 . + 0 ID=cds-WP_000957884.1;Parent=gene-CCO47_RS04195;Dbxref=GenBank:WP_000957884.1;Name=WP_000957884.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461920.1;locus_tag=CCO47_RS04195;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000957884.1;transl_table=11 NZ_CP075113.1 RefSeq gene 870635 871510 . + . ID=gene-CCO47_RS04200;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=CCO47_RS04200;old_locus_tag=CCO47_04200 NZ_CP075113.1 Protein Homology CDS 870635 871510 . + 0 ID=cds-WP_000204645.1;Parent=gene-CCO47_RS04200;Dbxref=GenBank:WP_000204645.1;Name=WP_000204645.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461919.1;locus_tag=CCO47_RS04200;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204645.1;transl_table=11 NZ_CP075113.1 RefSeq gene 871517 872311 . + . ID=gene-CCO47_RS04205;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=CCO47_RS04205;old_locus_tag=CCO47_04205 NZ_CP075113.1 Protein Homology CDS 871517 872311 . + 0 ID=cds-WP_000816247.1;Parent=gene-CCO47_RS04205;Dbxref=GenBank:WP_000816247.1;Name=WP_000816247.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=CCO47_RS04205;product=thymidylate synthase;protein_id=WP_000816247.1;transl_table=11 NZ_CP075113.1 RefSeq gene 872496 872966 . + . ID=gene-CCO47_RS04210;Name=CCO47_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04210;old_locus_tag=CCO47_04210 NZ_CP075113.1 Protein Homology CDS 872496 872966 . + 0 ID=cds-WP_000744668.1;Parent=gene-CCO47_RS04210;Dbxref=GenBank:WP_000744668.1;Name=WP_000744668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077605.1;locus_tag=CCO47_RS04210;product=prepilin peptidase-dependent protein;protein_id=WP_000744668.1;transl_table=11 NZ_CP075113.1 RefSeq gene 872957 873520 . + . ID=gene-CCO47_RS04215;Name=CCO47_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04215;old_locus_tag=CCO47_04215 NZ_CP075113.1 Protein Homology CDS 872957 873520 . + 0 ID=cds-WP_000029153.1;Parent=gene-CCO47_RS04215;Dbxref=GenBank:WP_000029153.1;Name=WP_000029153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461916.1;locus_tag=CCO47_RS04215;product=prepilin peptidase-dependent protein;protein_id=WP_000029153.1;transl_table=11 NZ_CP075113.1 RefSeq gene 873517 873924 . + . ID=gene-CCO47_RS04220;Name=CCO47_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04220;old_locus_tag=CCO47_04220 NZ_CP075113.1 Protein Homology CDS 873517 873924 . + 0 ID=cds-WP_001078539.1;Parent=gene-CCO47_RS04220;Dbxref=GenBank:WP_001078539.1;Name=WP_001078539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461915.1;locus_tag=CCO47_RS04220;product=DUF2509 family protein;protein_id=WP_001078539.1;transl_table=11 NZ_CP075113.1 RefSeq gene 873909 874229 . + . ID=gene-CCO47_RS04225;Name=CCO47_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04225;old_locus_tag=CCO47_04225 NZ_CP075113.1 Protein Homology CDS 873909 874229 . + 0 ID=cds-WP_000019294.1;Parent=gene-CCO47_RS04225;Dbxref=GenBank:WP_000019294.1;Name=WP_000019294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461914.1;locus_tag=CCO47_RS04225;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_000019294.1;transl_table=11 NZ_CP075113.1 RefSeq gene 874245 877616 . + . ID=gene-CCO47_RS04230;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=CCO47_RS04230;old_locus_tag=CCO47_04230 NZ_CP075113.1 Protein Homology CDS 874245 877616 . + 0 ID=cds-WP_000946832.1;Parent=gene-CCO47_RS04230;Dbxref=GenBank:WP_000946832.1;Name=WP_000946832.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461913.2;locus_tag=CCO47_RS04230;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_000946832.1;transl_table=11 NZ_CP075113.1 RefSeq gene 877794 880682 . + . ID=gene-CCO47_RS04235;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=CCO47_RS04235;old_locus_tag=CCO47_04235 NZ_CP075113.1 Protein Homology CDS 877794 880682 . + 0 ID=cds-WP_001138258.1;Parent=gene-CCO47_RS04235;Dbxref=GenBank:WP_001138258.1;Name=WP_001138258.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461912.1;locus_tag=CCO47_RS04235;product=pitrilysin;protein_id=WP_001138258.1;transl_table=11 NZ_CP075113.1 RefSeq gene 880675 884220 . + . ID=gene-CCO47_RS04240;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=CCO47_RS04240;old_locus_tag=CCO47_04240 NZ_CP075113.1 Protein Homology CDS 880675 884220 . + 0 ID=cds-WP_001000558.1;Parent=gene-CCO47_RS04240;Dbxref=GenBank:WP_001000558.1;Name=WP_001000558.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461911.1;locus_tag=CCO47_RS04240;product=exodeoxyribonuclease V subunit beta;protein_id=WP_001000558.1;transl_table=11 NZ_CP075113.1 RefSeq gene 884217 886052 . + . ID=gene-CCO47_RS04245;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=CCO47_RS04245;old_locus_tag=CCO47_04245 NZ_CP075113.1 Protein Homology CDS 884217 886052 . + 0 ID=cds-WP_000155128.1;Parent=gene-CCO47_RS04245;Dbxref=GenBank:WP_000155128.1;Name=WP_000155128.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461910.1;locus_tag=CCO47_RS04245;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_000155128.1;transl_table=11 NZ_CP075113.1 RefSeq gene 886155 887486 . - . ID=gene-CCO47_RS04250;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=CCO47_RS04250;old_locus_tag=CCO47_04250 NZ_CP075113.1 Protein Homology CDS 886155 887486 . - 0 ID=cds-WP_000588964.1;Parent=gene-CCO47_RS04250;Dbxref=GenBank:WP_000588964.1;Name=WP_000588964.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461909.1;locus_tag=CCO47_RS04250;product=amino-acid N-acetyltransferase;protein_id=WP_000588964.1;transl_table=11 NZ_CP075113.1 RefSeq gene 887719 888972 . + . ID=gene-CCO47_RS04255;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=CCO47_RS04255;old_locus_tag=CCO47_04255 NZ_CP075113.1 Protein Homology CDS 887719 888972 . + 0 ID=cds-WP_000011921.1;Parent=gene-CCO47_RS04255;Dbxref=GenBank:WP_000011921.1;Name=WP_000011921.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461908.1;locus_tag=CCO47_RS04255;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_000011921.1;transl_table=11 NZ_CP075113.1 RefSeq gene 889082 889158 . - . ID=gene-CCO47_RS04260;Name=CCO47_RS04260;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS04260;old_locus_tag=CCO47_04260 NZ_CP075113.1 tRNAscan-SE tRNA 889082 889158 . - . ID=rna-CCO47_RS04260;Parent=gene-CCO47_RS04260;anticodon=(pos:complement(889122..889124));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS04260;product=tRNA-Met NZ_CP075113.1 tRNAscan-SE exon 889082 889158 . - . ID=exon-CCO47_RS04260-1;Parent=rna-CCO47_RS04260;anticodon=(pos:complement(889122..889124));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS04260;product=tRNA-Met NZ_CP075113.1 RefSeq gene 889188 889264 . - . ID=gene-CCO47_RS04265;Name=CCO47_RS04265;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS04265;old_locus_tag=CCO47_04265 NZ_CP075113.1 tRNAscan-SE tRNA 889188 889264 . - . ID=rna-CCO47_RS04265;Parent=gene-CCO47_RS04265;anticodon=(pos:complement(889228..889230));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS04265;product=tRNA-Met NZ_CP075113.1 tRNAscan-SE exon 889188 889264 . - . ID=exon-CCO47_RS04265-1;Parent=rna-CCO47_RS04265;anticodon=(pos:complement(889228..889230));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS04265;product=tRNA-Met NZ_CP075113.1 RefSeq gene 889472 890569 . + . ID=gene-CCO47_RS04270;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=CCO47_RS04270;old_locus_tag=CCO47_04270 NZ_CP075113.1 Protein Homology CDS 889472 890569 . + 0 ID=cds-WP_000678626.1;Parent=gene-CCO47_RS04270;Dbxref=GenBank:WP_000678626.1;Name=WP_000678626.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=CCO47_RS04270;product=murein transglycosylase A;protein_id=WP_000678626.1;transl_table=11 NZ_CP075113.1 RefSeq gene 890679 891485 . + . ID=gene-CCO47_RS04275;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=CCO47_RS04275;old_locus_tag=CCO47_04275 NZ_CP075113.1 Protein Homology CDS 890679 891485 . + 0 ID=cds-WP_000117748.1;Parent=gene-CCO47_RS04275;Dbxref=GenBank:WP_000117748.1;Name=WP_000117748.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461906.1;locus_tag=CCO47_RS04275;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_000117748.1;transl_table=11 NZ_CP075113.1 RefSeq gene 891537 892424 . - . ID=gene-CCO47_RS04280;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=CCO47_RS04280;old_locus_tag=CCO47_04280 NZ_CP075113.1 Protein Homology CDS 891537 892424 . - 0 ID=cds-WP_001752699.1;Parent=gene-CCO47_RS04280;Dbxref=GenBank:WP_001752699.1;Name=WP_001752699.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=CCO47_RS04280;product=EamA family transporter RarD;protein_id=WP_001752699.1;transl_table=11 NZ_CP075113.1 RefSeq gene 892724 893167 . - . ID=gene-CCO47_RS04285;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=CCO47_RS04285;old_locus_tag=CCO47_04285 NZ_CP075113.1 Protein Homology CDS 892724 893167 . - 0 ID=cds-WP_000184195.1;Parent=gene-CCO47_RS04285;Dbxref=GenBank:WP_000184195.1;Name=WP_000184195.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461904.1;locus_tag=CCO47_RS04285;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_000184195.1;transl_table=11 NZ_CP075113.1 RefSeq gene 893167 894372 . - . ID=gene-CCO47_RS04290;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=CCO47_RS04290;old_locus_tag=CCO47_04290 NZ_CP075113.1 Protein Homology CDS 893167 894372 . - 0 ID=cds-WP_000991056.1;Parent=gene-CCO47_RS04290;Dbxref=GenBank:WP_000991056.1;Name=WP_000991056.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461903.1;locus_tag=CCO47_RS04290;product=cysteine desulfurase CsdA;protein_id=WP_000991056.1;transl_table=11 NZ_CP075113.1 RefSeq gene 894565 894792 . + . ID=gene-CCO47_RS04295;Name=CCO47_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04295;old_locus_tag=CCO47_04295 NZ_CP075113.1 Protein Homology CDS 894565 894792 . + 0 ID=cds-WP_000750393.1;Parent=gene-CCO47_RS04295;Dbxref=GenBank:WP_000750393.1;Name=WP_000750393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461902.1;locus_tag=CCO47_RS04295;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750393.1;transl_table=11 NZ_CP075113.1 RefSeq gene 895139 896056 . + . ID=gene-CCO47_RS04300;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=CCO47_RS04300;old_locus_tag=CCO47_04300 NZ_CP075113.1 Protein Homology CDS 895139 896056 . + 0 ID=cds-WP_000044409.1;Parent=gene-CCO47_RS04300;Dbxref=GenBank:WP_000044409.1;Name=WP_000044409.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=CCO47_RS04300;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_000044409.1;transl_table=11 NZ_CP075113.1 RefSeq gene 896075 896470 . + . ID=gene-CCO47_RS04305;Name=CCO47_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04305;old_locus_tag=CCO47_04305 NZ_CP075113.1 Protein Homology CDS 896075 896470 . + 0 ID=cds-WP_000203913.1;Parent=gene-CCO47_RS04305;Dbxref=GenBank:WP_000203913.1;Name=WP_000203913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461900.1;locus_tag=CCO47_RS04305;product=DUF423 domain-containing protein;protein_id=WP_000203913.1;transl_table=11 NZ_CP075113.1 RefSeq gene 896463 897563 . + . ID=gene-CCO47_RS04310;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=CCO47_RS04310;old_locus_tag=CCO47_04310 NZ_CP075113.1 Protein Homology CDS 896463 897563 . + 0 ID=cds-WP_001045489.1;Parent=gene-CCO47_RS04310;Dbxref=GenBank:WP_001045489.1;Name=WP_001045489.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=CCO47_RS04310;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_001045489.1;transl_table=11 NZ_CP075113.1 RefSeq gene 897622 898332 . - . ID=gene-CCO47_RS04315;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=CCO47_RS04315;old_locus_tag=CCO47_04315 NZ_CP075113.1 Protein Homology CDS 897622 898332 . - 0 ID=cds-WP_000642332.1;Parent=gene-CCO47_RS04315;Dbxref=GenBank:WP_000642332.1;Name=WP_000642332.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461898.1;locus_tag=CCO47_RS04315;product=L-fucose operon activator;protein_id=WP_000642332.1;transl_table=11 NZ_CP075113.1 RefSeq gene 898390 898812 . - . ID=gene-CCO47_RS04320;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=CCO47_RS04320;old_locus_tag=CCO47_04320 NZ_CP075113.1 Protein Homology CDS 898390 898812 . - 0 ID=cds-WP_000920848.1;Parent=gene-CCO47_RS04320;Dbxref=GenBank:WP_000920848.1;Name=WP_000920848.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461897.1;locus_tag=CCO47_RS04320;product=L-fucose mutarotase;protein_id=WP_000920848.1;transl_table=11 NZ_CP075113.1 RefSeq gene 898814 900232 . - . ID=gene-CCO47_RS04325;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=CCO47_RS04325;old_locus_tag=CCO47_04325 NZ_CP075113.1 Protein Homology CDS 898814 900232 . - 0 ID=cds-WP_000806786.1;Parent=gene-CCO47_RS04325;Dbxref=GenBank:WP_000806786.1;Name=WP_000806786.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=CCO47_RS04325;product=L-fuculokinase;protein_id=WP_000806786.1;transl_table=11 NZ_CP075113.1 RefSeq gene 900333 902108 . - . ID=gene-CCO47_RS04330;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=CCO47_RS04330;old_locus_tag=CCO47_04330 NZ_CP075113.1 Protein Homology CDS 900333 902108 . - 0 ID=cds-WP_000724134.1;Parent=gene-CCO47_RS04330;Dbxref=GenBank:WP_000724134.1;Name=WP_000724134.1;Ontology_term=GO:0019317,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=CCO47_RS04330;product=L-fucose isomerase;protein_id=WP_000724134.1;transl_table=11 NZ_CP075113.1 RefSeq gene 902140 903456 . - . ID=gene-CCO47_RS04335;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=CCO47_RS04335;old_locus_tag=CCO47_04335 NZ_CP075113.1 Protein Homology CDS 902140 903456 . - 0 ID=cds-WP_094912454.1;Parent=gene-CCO47_RS04335;Dbxref=GenBank:WP_094912454.1;Name=WP_094912454.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=CCO47_RS04335;product=L-fucose:H+ symporter permease;protein_id=WP_094912454.1;transl_table=11 NZ_CP075113.1 RefSeq gene 904011 904658 . + . ID=gene-CCO47_RS04340;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=CCO47_RS04340;old_locus_tag=CCO47_04340 NZ_CP075113.1 Protein Homology CDS 904011 904658 . + 0 ID=cds-WP_000440819.1;Parent=gene-CCO47_RS04340;Dbxref=GenBank:WP_000440819.1;Name=WP_000440819.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461894.1;locus_tag=CCO47_RS04340;product=L-fuculose-phosphate aldolase;protein_id=WP_000440819.1;transl_table=11 NZ_CP075113.1 RefSeq gene 904675 905823 . + . ID=gene-CCO47_RS04345;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=CCO47_RS04345;old_locus_tag=CCO47_04345 NZ_CP075113.1 Protein Homology CDS 904675 905823 . + 0 ID=cds-WP_000013564.1;Parent=gene-CCO47_RS04345;Dbxref=GenBank:WP_000013564.1;Name=WP_000013564.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=CCO47_RS04345;product=lactaldehyde reductase;protein_id=WP_000013564.1;transl_table=11 NZ_CP075113.1 RefSeq gene 905915 906670 . - . ID=gene-CCO47_RS04350;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=CCO47_RS04350;old_locus_tag=CCO47_04350 NZ_CP075113.1 Protein Homology CDS 905915 906670 . - 0 ID=cds-WP_001574919.1;Parent=gene-CCO47_RS04350;Dbxref=GenBank:WP_001574919.1;Name=WP_001574919.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=CCO47_RS04350;product=flap endonuclease Xni;protein_id=WP_001574919.1;transl_table=11 NZ_CP075113.1 RefSeq gene 906840 908207 . - . ID=gene-CCO47_RS04355;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=CCO47_RS04355;old_locus_tag=CCO47_04355 NZ_CP075113.1 Protein Homology CDS 906840 908207 . - 0 ID=cds-WP_000626384.1;Parent=gene-CCO47_RS04355;Dbxref=GenBank:WP_000626384.1;Name=WP_000626384.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=CCO47_RS04355;product=L-serine ammonia-lyase II;protein_id=WP_000626384.1;transl_table=11 NZ_CP075113.1 RefSeq gene 908266 909555 . - . ID=gene-CCO47_RS04360;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=CCO47_RS04360;old_locus_tag=CCO47_04360 NZ_CP075113.1 Protein Homology CDS 908266 909555 . - 0 ID=cds-WP_000450462.1;Parent=gene-CCO47_RS04360;Dbxref=GenBank:WP_000450462.1;Name=WP_000450462.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461890.1;locus_tag=CCO47_RS04360;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_000450462.1;transl_table=11 NZ_CP075113.1 RefSeq gene 910120 911484 . - . ID=gene-CCO47_RS04365;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=CCO47_RS04365;old_locus_tag=CCO47_04365 NZ_CP075113.1 Protein Homology CDS 910120 911484 . - 0 ID=cds-WP_000627972.1;Parent=gene-CCO47_RS04365;Dbxref=GenBank:WP_000627972.1;Name=WP_000627972.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=CCO47_RS04365;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_000627972.1;transl_table=11 NZ_CP075113.1 RefSeq gene 911597 912445 . - . ID=gene-CCO47_RS04370;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=CCO47_RS04370;old_locus_tag=CCO47_04370 NZ_CP075113.1 Protein Homology CDS 911597 912445 . - 0 ID=cds-WP_000100463.1;Parent=gene-CCO47_RS04370;Dbxref=GenBank:WP_000100463.1;Name=WP_000100463.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461888.1;locus_tag=CCO47_RS04370;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_000100463.1;transl_table=11 NZ_CP075113.1 RefSeq gene 912513 913058 . + . ID=gene-CCO47_RS04375;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=CCO47_RS04375;old_locus_tag=CCO47_04375 NZ_CP075113.1 Protein Homology CDS 912513 913058 . + 0 ID=cds-WP_000343990.1;Parent=gene-CCO47_RS04375;Dbxref=GenBank:WP_000343990.1;Name=WP_000343990.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461887.1;locus_tag=CCO47_RS04375;product=SecY-interacting protein;protein_id=WP_000343990.1;transl_table=11 NZ_CP075113.1 RefSeq gene 913670 913999 . + . ID=gene-CCO47_RS04380;Name=CCO47_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04380;old_locus_tag=CCO47_04380 NZ_CP075113.1 Protein Homology CDS 913670 913999 . + 0 ID=cds-WP_000207015.1;Parent=gene-CCO47_RS04380;Dbxref=GenBank:WP_000207015.1;Name=WP_000207015.1;Ontology_term=GO:0044010;gbkey=CDS;go_process=single-species biofilm formation|0044010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461886.1;locus_tag=CCO47_RS04380;product=YqcC family protein;protein_id=WP_000207015.1;transl_table=11 NZ_CP075113.1 RefSeq gene 913999 914781 . + . ID=gene-CCO47_RS04385;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=CCO47_RS04385;old_locus_tag=CCO47_04385 NZ_CP075113.1 Protein Homology CDS 913999 914781 . + 0 ID=cds-WP_000890030.1;Parent=gene-CCO47_RS04385;Dbxref=GenBank:WP_000890030.1;Name=WP_000890030.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715016.1;locus_tag=CCO47_RS04385;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_000890030.1;transl_table=11 NZ_CP075113.1 RefSeq gene 914800 915249 . + . ID=gene-CCO47_RS04390;Name=CCO47_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04390;old_locus_tag=CCO47_04390 NZ_CP075113.1 Protein Homology CDS 914800 915249 . + 0 ID=cds-WP_000807731.1;Parent=gene-CCO47_RS04390;Dbxref=GenBank:WP_000807731.1;Name=WP_000807731.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461884.1;locus_tag=CCO47_RS04390;product=flavodoxin;protein_id=WP_000807731.1;transl_table=11 NZ_CP075113.1 RefSeq gene 915399 915647 . - . ID=gene-CCO47_RS04395;Name=CCO47_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04395;old_locus_tag=CCO47_04395 NZ_CP075113.1 GeneMarkS-2+ CDS 915399 915647 . - 0 ID=cds-WP_001531815.1;Parent=gene-CCO47_RS04395;Dbxref=GenBank:WP_001531815.1;Name=WP_001531815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO47_RS04395;product=hypothetical protein;protein_id=WP_001531815.1;transl_table=11 NZ_CP075113.1 RefSeq gene 915730 917088 . + . ID=gene-CCO47_RS04400;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=CCO47_RS04400;old_locus_tag=CCO47_04400 NZ_CP075113.1 Protein Homology CDS 915730 917088 . + 0 ID=cds-WP_000097017.1;Parent=gene-CCO47_RS04400;Dbxref=GenBank:WP_000097017.1;Name=WP_000097017.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=CCO47_RS04400;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_000097017.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 917085 918425 . + . ID=gene-CCO47_RS04405;Name=CCO47_RS04405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS04405;old_locus_tag=CCO47_04405;pseudo=true NZ_CP075113.1 Protein Homology CDS 917085 918425 . + 0 ID=cds-CCO47_RS04405;Parent=gene-CCO47_RS04405;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=CCO47_RS04405;product=enolase C-terminal domain-like protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 918446 919786 . + . ID=gene-CCO47_RS04410;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=CCO47_RS04410;old_locus_tag=CCO47_04410 NZ_CP075113.1 Protein Homology CDS 918446 919786 . + 0 ID=cds-WP_000107113.1;Parent=gene-CCO47_RS04410;Dbxref=GenBank:WP_000107113.1;Name=WP_000107113.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=CCO47_RS04410;product=glucarate dehydratase;protein_id=WP_000107113.1;transl_table=11 NZ_CP075113.1 RefSeq gene 919864 921006 . + . ID=gene-CCO47_RS04415;Name=CCO47_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04415;old_locus_tag=CCO47_04415 NZ_CP075113.1 Protein Homology CDS 919864 921006 . + 0 ID=cds-WP_000706485.1;Parent=gene-CCO47_RS04415;Dbxref=GenBank:WP_000706485.1;Name=WP_000706485.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=CCO47_RS04415;product=glycerate kinase;protein_id=WP_000706485.1;transl_table=11 NZ_CP075113.1 RefSeq gene 921050 923806 . - . ID=gene-CCO47_RS04420;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=CCO47_RS04420;old_locus_tag=CCO47_04420 NZ_CP075113.1 Protein Homology CDS 921050 923806 . - 0 ID=cds-WP_000186394.1;Parent=gene-CCO47_RS04420;Dbxref=GenBank:WP_000186394.1;Name=WP_000186394.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461879.1;locus_tag=CCO47_RS04420;product=two-component sensor histidine kinase BarA;protein_id=WP_000186394.1;transl_table=11 NZ_CP075113.1 RefSeq gene 923864 925159 . + . ID=gene-CCO47_RS04425;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=CCO47_RS04425;old_locus_tag=CCO47_04425 NZ_CP075113.1 Protein Homology CDS 923864 925159 . + 0 ID=cds-WP_000046850.1;Parent=gene-CCO47_RS04425;Dbxref=GenBank:WP_000046850.1;Name=WP_000046850.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461878.1;locus_tag=CCO47_RS04425;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_000046850.1;transl_table=11 NZ_CP075113.1 RefSeq gene 925211 927445 . + . ID=gene-CCO47_RS04430;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=CCO47_RS04430;old_locus_tag=CCO47_04430 NZ_CP075113.1 Protein Homology CDS 925211 927445 . + 0 ID=cds-WP_000226838.1;Parent=gene-CCO47_RS04430;Dbxref=GenBank:WP_000226838.1;Name=WP_000226838.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461877.1;locus_tag=CCO47_RS04430;product=GTP diphosphokinase;protein_id=WP_000226838.1;transl_table=11 NZ_CP075113.1 RefSeq gene 927795 928826 . - . ID=gene-CCO47_RS04435;Name=CCO47_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04435;old_locus_tag=CCO47_04435 NZ_CP075113.1 Protein Homology CDS 927795 928826 . - 0 ID=cds-WP_001072353.1;Parent=gene-CCO47_RS04435;Dbxref=GenBank:WP_001072353.1;Name=WP_001072353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750138.1;locus_tag=CCO47_RS04435;product=hypothetical protein;protein_id=WP_001072353.1;transl_table=11 NZ_CP075113.1 RefSeq gene 928881 929417 . - . ID=gene-CCO47_RS04440;Name=CCO47_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04440;old_locus_tag=CCO47_04440 NZ_CP075113.1 Protein Homology CDS 928881 929417 . - 0 ID=cds-WP_001079646.1;Parent=gene-CCO47_RS04440;Dbxref=GenBank:WP_001079646.1;Name=WP_001079646.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001079648.1;locus_tag=CCO47_RS04440;product=fimbrial protein;protein_id=WP_001079646.1;transl_table=11 NZ_CP075113.1 RefSeq gene 929414 929884 . - . ID=gene-CCO47_RS04445;Name=CCO47_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04445;old_locus_tag=CCO47_04445 NZ_CP075113.1 Protein Homology CDS 929414 929884 . - 0 ID=cds-WP_000832393.1;Parent=gene-CCO47_RS04445;Dbxref=GenBank:WP_000832393.1;Name=WP_000832393.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006667202.1;locus_tag=CCO47_RS04445;product=fimbrial protein;protein_id=WP_000832393.1;transl_table=11 NZ_CP075113.1 RefSeq gene 929899 930405 . - . ID=gene-CCO47_RS04450;Name=CCO47_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04450;old_locus_tag=CCO47_04450 NZ_CP075113.1 Protein Homology CDS 929899 930405 . - 0 ID=cds-WP_000178270.1;Parent=gene-CCO47_RS04450;Dbxref=GenBank:WP_000178270.1;Name=WP_000178270.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178262.1;locus_tag=CCO47_RS04450;product=fimbrial protein;protein_id=WP_000178270.1;transl_table=11 NZ_CP075113.1 RefSeq gene 930425 931198 . - . ID=gene-CCO47_RS04455;Name=CCO47_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04455;old_locus_tag=CCO47_04455 NZ_CP075113.1 Protein Homology CDS 930425 931198 . - 0 ID=cds-WP_001044459.1;Parent=gene-CCO47_RS04455;Dbxref=GenBank:WP_001044459.1;Name=WP_001044459.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044456.1;locus_tag=CCO47_RS04455;product=fimbria/pilus periplasmic chaperone;protein_id=WP_001044459.1;transl_table=11 NZ_CP075113.1 RefSeq gene 931211 933907 . - . ID=gene-CCO47_RS04460;Name=steB;gbkey=Gene;gene=steB;gene_biotype=protein_coding;locus_tag=CCO47_RS04460;old_locus_tag=CCO47_04460 NZ_CP075113.1 Protein Homology CDS 931211 933907 . - 0 ID=cds-WP_071591183.1;Parent=gene-CCO47_RS04460;Dbxref=GenBank:WP_071591183.1;Name=WP_071591183.1;gbkey=CDS;gene=steB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_071818056.1;locus_tag=CCO47_RS04460;product=fimbrial biogenesis outer membrane usher protein SteB;protein_id=WP_071591183.1;transl_table=11 NZ_CP075113.1 RefSeq gene 933990 934577 . - . ID=gene-CCO47_RS04465;Name=CCO47_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04465;old_locus_tag=CCO47_04465 NZ_CP075113.1 Protein Homology CDS 933990 934577 . - 0 ID=cds-WP_000842512.1;Parent=gene-CCO47_RS04465;Dbxref=GenBank:WP_000842512.1;Name=WP_000842512.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=CCO47_RS04465;product=fimbrial protein;protein_id=WP_000842512.1;transl_table=11 NZ_CP075113.1 RefSeq gene 935183 935983 . + . ID=gene-CCO47_RS04470;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=CCO47_RS04470;old_locus_tag=CCO47_04470 NZ_CP075113.1 Protein Homology CDS 935183 935983 . + 0 ID=cds-WP_000210451.1;Parent=gene-CCO47_RS04470;Dbxref=GenBank:WP_000210451.1;Name=WP_000210451.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461875.1;locus_tag=CCO47_RS04470;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_000210451.1;transl_table=11 NZ_CP075113.1 RefSeq gene 936211 937848 . + . ID=gene-CCO47_RS04475;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=CCO47_RS04475;old_locus_tag=CCO47_04475 NZ_CP075113.1 Protein Homology CDS 936211 937848 . + 0 ID=cds-WP_000210863.1;Parent=gene-CCO47_RS04475;Dbxref=GenBank:WP_000210863.1;Name=WP_000210863.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=CCO47_RS04475;product=glutamine hydrolyzing CTP synthase;protein_id=WP_000210863.1;transl_table=11 NZ_CP075113.1 RefSeq gene 937931 939229 . + . ID=gene-CCO47_RS04480;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=CCO47_RS04480;old_locus_tag=CCO47_04480 NZ_CP075113.1 Protein Homology CDS 937931 939229 . + 0 ID=cds-WP_000036735.1;Parent=gene-CCO47_RS04480;Dbxref=GenBank:WP_000036735.1;Name=WP_000036735.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=CCO47_RS04480;product=phosphopyruvate hydratase;protein_id=WP_000036735.1;transl_table=11 NZ_CP075113.1 RefSeq gene 939365 940036 . + . ID=gene-CCO47_RS04485;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=CCO47_RS04485;old_locus_tag=CCO47_04485 NZ_CP075113.1 Protein Homology CDS 939365 940036 . + 0 ID=cds-WP_001199961.1;Parent=gene-CCO47_RS04485;Dbxref=GenBank:WP_001199961.1;Name=WP_001199961.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=CCO47_RS04485;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199961.1;transl_table=11 NZ_CP075113.1 RefSeq direct_repeat 940333 940603 . + . ID=id-NZ_CP075113.1:940333..940603;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=940333..940359;rpt_unit_seq=gtgttccccgcgccagcggggataaac NZ_CP075113.1 RefSeq gene 940704 941501 . + . ID=gene-CCO47_RS04490;Name=CCO47_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04490;old_locus_tag=CCO47_04490 NZ_CP075113.1 Protein Homology CDS 940704 941501 . + 0 ID=cds-WP_001207998.1;Parent=gene-CCO47_RS04490;Dbxref=GenBank:WP_001207998.1;Name=WP_001207998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=CCO47_RS04490;product=MBL fold metallo-hydrolase;protein_id=WP_001207998.1;transl_table=11 NZ_CP075113.1 RefSeq gene 941589 941951 . - . ID=gene-CCO47_RS04495;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=CCO47_RS04495;old_locus_tag=CCO47_04495 NZ_CP075113.1 Protein Homology CDS 941589 941951 . - 0 ID=cds-WP_000108313.1;Parent=gene-CCO47_RS04495;Dbxref=GenBank:WP_000108313.1;Name=WP_000108313.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461870.1;locus_tag=CCO47_RS04495;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108313.1;transl_table=11 NZ_CP075113.1 RefSeq gene 942375 944174 . + . ID=gene-CCO47_RS04500;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=CCO47_RS04500;old_locus_tag=CCO47_04500 NZ_CP075113.1 Protein Homology CDS 942375 944174 . + 0 ID=cds-WP_000210930.1;Parent=gene-CCO47_RS04500;Dbxref=GenBank:WP_000210930.1;Name=WP_000210930.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461869.1;locus_tag=CCO47_RS04500;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_000210930.1;transl_table=11 NZ_CP075113.1 RefSeq gene 944174 945886 . + . ID=gene-CCO47_RS04505;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=CCO47_RS04505;old_locus_tag=CCO47_04505 NZ_CP075113.1 Protein Homology CDS 944174 945886 . + 0 ID=cds-WP_001290672.1;Parent=gene-CCO47_RS04505;Dbxref=GenBank:WP_001290672.1;Name=WP_001290672.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=CCO47_RS04505;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_001290672.1;transl_table=11 NZ_CP075113.1 RefSeq gene 945988 946722 . + . ID=gene-CCO47_RS04510;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=CCO47_RS04510;old_locus_tag=CCO47_04510 NZ_CP075113.1 Protein Homology CDS 945988 946722 . + 0 ID=cds-WP_000039870.1;Parent=gene-CCO47_RS04510;Dbxref=GenBank:WP_000039870.1;Name=WP_000039870.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461867.1;locus_tag=CCO47_RS04510;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000039870.1;transl_table=11 NZ_CP075113.1 RefSeq gene 946810 947763 . - . ID=gene-CCO47_RS04515;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=protein_coding;locus_tag=CCO47_RS04515;old_locus_tag=CCO47_04515 NZ_CP075113.1 Protein Homology CDS 946810 947763 . - 0 ID=cds-WP_001145541.1;Parent=gene-CCO47_RS04515;Dbxref=GenBank:WP_001145541.1;Name=WP_001145541.1;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461866.1;locus_tag=CCO47_RS04515;product=SPI-1 type III secretion system effector SopD;protein_id=WP_001145541.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 948207 950870 . + . ID=gene-CCO47_RS04520;Name=cas3;gbkey=Gene;gene=cas3;gene_biotype=pseudogene;locus_tag=CCO47_RS04520;old_locus_tag=CCO47_04520;pseudo=true NZ_CP075113.1 Protein Homology CDS 948207 950870 . + 0 ID=cds-CCO47_RS04520;Parent=gene-CCO47_RS04520;Note=internal stop;Ontology_term=GO:0043571,GO:0004386;gbkey=CDS;gene=cas3;go_function=helicase activity|0004386||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461865.1;locus_tag=CCO47_RS04520;product=CRISPR-associated helicase Cas3';pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 950882 952438 . + . ID=gene-CCO47_RS04525;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;gene_synonym=cse1;locus_tag=CCO47_RS04525;old_locus_tag=CCO47_04525 NZ_CP075113.1 Protein Homology CDS 950882 952438 . + 0 ID=cds-WP_000368579.1;Parent=gene-CCO47_RS04525;Dbxref=GenBank:WP_000368579.1;Name=WP_000368579.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461864.1;locus_tag=CCO47_RS04525;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WP_000368579.1;transl_table=11 NZ_CP075113.1 RefSeq gene 952435 952995 . + . ID=gene-CCO47_RS04530;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;gene_synonym=cse2;locus_tag=CCO47_RS04530;old_locus_tag=CCO47_04530 NZ_CP075113.1 Protein Homology CDS 952435 952995 . + 0 ID=cds-WP_000117944.1;Parent=gene-CCO47_RS04530;Dbxref=GenBank:WP_000117944.1;Name=WP_000117944.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casB;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461863.1;locus_tag=CCO47_RS04530;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WP_000117944.1;transl_table=11 NZ_CP075113.1 RefSeq gene 953009 954067 . + . ID=gene-CCO47_RS04535;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=CCO47_RS04535;old_locus_tag=CCO47_04535 NZ_CP075113.1 Protein Homology CDS 953009 954067 . + 0 ID=cds-WP_000206413.1;Parent=gene-CCO47_RS04535;Dbxref=GenBank:WP_000206413.1;Name=WP_000206413.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas7e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461862.1;locus_tag=CCO47_RS04535;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WP_000206413.1;transl_table=11 NZ_CP075113.1 RefSeq gene 954078 954824 . + . ID=gene-CCO47_RS04540;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=CCO47_RS04540;old_locus_tag=CCO47_04540 NZ_CP075113.1 Protein Homology CDS 954078 954824 . + 0 ID=cds-WP_000085105.1;Parent=gene-CCO47_RS04540;Dbxref=GenBank:WP_000085105.1;Name=WP_000085105.1;Ontology_term=GO:0043571,GO:0051607,GO:0003723;gbkey=CDS;gene=cas5e;go_function=RNA binding|0003723||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461861.1;locus_tag=CCO47_RS04540;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WP_000085105.1;transl_table=11 NZ_CP075113.1 RefSeq gene 954806 955456 . + . ID=gene-CCO47_RS04545;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=CCO47_RS04545;old_locus_tag=CCO47_04545 NZ_CP075113.1 Protein Homology CDS 954806 955456 . + 0 ID=cds-WP_000281487.1;Parent=gene-CCO47_RS04545;Dbxref=GenBank:WP_000281487.1;Name=WP_000281487.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas6e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461860.1;locus_tag=CCO47_RS04545;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WP_000281487.1;transl_table=11 NZ_CP075113.1 RefSeq gene 955453 956373 . + . ID=gene-CCO47_RS04550;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=CCO47_RS04550;old_locus_tag=CCO47_04550 NZ_CP075113.1 Protein Homology CDS 955453 956373 . + 0 ID=cds-WP_000144833.1;Parent=gene-CCO47_RS04550;Dbxref=GenBank:WP_000144833.1;Name=WP_000144833.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461859.1;locus_tag=CCO47_RS04550;product=type I-E CRISPR-associated endonuclease Cas1e;protein_id=WP_000144833.1;transl_table=11 NZ_CP075113.1 RefSeq gene 956373 956666 . + . ID=gene-CCO47_RS04555;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=CCO47_RS04555;old_locus_tag=CCO47_04555 NZ_CP075113.1 Protein Homology CDS 956373 956666 . + 0 ID=cds-WP_001518648.1;Parent=gene-CCO47_RS04555;Dbxref=GenBank:WP_001518648.1;Name=WP_001518648.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311635.1;locus_tag=CCO47_RS04555;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WP_001518648.1;transl_table=11 NZ_CP075113.1 RefSeq gene 956928 957974 . - . ID=gene-CCO47_RS04560;Name=CCO47_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04560;old_locus_tag=CCO47_04560 NZ_CP075113.1 Protein Homology CDS 956928 957974 . - 0 ID=cds-WP_000490481.1;Parent=gene-CCO47_RS04560;Dbxref=GenBank:WP_000490481.1;Name=WP_000490481.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461857.1;locus_tag=CCO47_RS04560;product=aminopeptidase;protein_id=WP_000490481.1;transl_table=11 NZ_CP075113.1 RefSeq gene 958225 959133 . + . ID=gene-CCO47_RS04565;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=CCO47_RS04565;old_locus_tag=CCO47_04565 NZ_CP075113.1 Protein Homology CDS 958225 959133 . + 0 ID=cds-WP_000372384.1;Parent=gene-CCO47_RS04565;Dbxref=GenBank:WP_000372384.1;Name=WP_000372384.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=CCO47_RS04565;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372384.1;transl_table=11 NZ_CP075113.1 RefSeq gene 959143 960582 . + . ID=gene-CCO47_RS04570;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=CCO47_RS04570;old_locus_tag=CCO47_04570 NZ_CP075113.1 Protein Homology CDS 959143 960582 . + 0 ID=cds-WP_001092256.1;Parent=gene-CCO47_RS04570;Dbxref=GenBank:WP_001092256.1;Name=WP_001092256.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461855.1;locus_tag=CCO47_RS04570;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_001092256.1;transl_table=11 NZ_CP075113.1 RefSeq gene 960569 961174 . + . ID=gene-CCO47_RS04575;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=CCO47_RS04575;old_locus_tag=CCO47_04575 NZ_CP075113.1 Protein Homology CDS 960569 961174 . + 0 ID=cds-WP_001173663.1;Parent=gene-CCO47_RS04575;Dbxref=GenBank:WP_001173663.1;Name=WP_001173663.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461854.1;locus_tag=CCO47_RS04575;product=adenylyl-sulfate kinase;protein_id=WP_001173663.1;transl_table=11 NZ_CP075113.1 RefSeq gene 961225 961548 . + . ID=gene-CCO47_RS04580;Name=CCO47_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04580;old_locus_tag=CCO47_04580 NZ_CP075113.1 Protein Homology CDS 961225 961548 . + 0 ID=cds-WP_001537530.1;Parent=gene-CCO47_RS04580;Dbxref=GenBank:WP_001537530.1;Name=WP_001537530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246104.1;locus_tag=CCO47_RS04580;product=DUF3561 family protein;protein_id=WP_001537530.1;transl_table=11 NZ_CP075113.1 RefSeq gene 961739 962050 . + . ID=gene-CCO47_RS04585;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=CCO47_RS04585;old_locus_tag=CCO47_04585 NZ_CP075113.1 Protein Homology CDS 961739 962050 . + 0 ID=cds-WP_000517480.1;Parent=gene-CCO47_RS04585;Dbxref=GenBank:WP_000517480.1;Name=WP_000517480.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461852.1;locus_tag=CCO47_RS04585;product=cell division protein FtsB;protein_id=WP_000517480.1;transl_table=11 NZ_CP075113.1 RefSeq gene 962069 962779 . + . ID=gene-CCO47_RS04590;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=CCO47_RS04590;old_locus_tag=CCO47_04590 NZ_CP075113.1 Protein Homology CDS 962069 962779 . + 0 ID=cds-WP_000741653.1;Parent=gene-CCO47_RS04590;Dbxref=GenBank:WP_000741653.1;Name=WP_000741653.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461851.1;locus_tag=CCO47_RS04590;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_000741653.1;transl_table=11 NZ_CP075113.1 RefSeq gene 962779 963258 . + . ID=gene-CCO47_RS04595;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=CCO47_RS04595;old_locus_tag=CCO47_04595 NZ_CP075113.1 Protein Homology CDS 962779 963258 . + 0 ID=cds-WP_001219253.1;Parent=gene-CCO47_RS04595;Dbxref=GenBank:WP_001219253.1;Name=WP_001219253.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461850.1;locus_tag=CCO47_RS04595;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219253.1;transl_table=11 NZ_CP075113.1 RefSeq gene 963255 964304 . + . ID=gene-CCO47_RS04600;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=CCO47_RS04600;old_locus_tag=CCO47_04600 NZ_CP075113.1 Protein Homology CDS 963255 964304 . + 0 ID=cds-WP_000134246.1;Parent=gene-CCO47_RS04600;Dbxref=GenBank:WP_000134246.1;Name=WP_000134246.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461849.1;locus_tag=CCO47_RS04600;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_000134246.1;transl_table=11 NZ_CP075113.1 RefSeq gene 964285 965046 . + . ID=gene-CCO47_RS04605;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=CCO47_RS04605;old_locus_tag=CCO47_04605 NZ_CP075113.1 Protein Homology CDS 964285 965046 . + 0 ID=cds-WP_001221533.1;Parent=gene-CCO47_RS04605;Dbxref=GenBank:WP_001221533.1;Name=WP_001221533.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461848.1;locus_tag=CCO47_RS04605;product=5'/3'-nucleotidase SurE;protein_id=WP_001221533.1;transl_table=11 NZ_CP075113.1 RefSeq gene 965040 965666 . + . ID=gene-CCO47_RS04610;Name=CCO47_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04610;old_locus_tag=CCO47_04610 NZ_CP075113.1 Protein Homology CDS 965040 965666 . + 0 ID=cds-WP_000253545.1;Parent=gene-CCO47_RS04610;Dbxref=GenBank:WP_000253545.1;Name=WP_000253545.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=CCO47_RS04610;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_000253545.1;transl_table=11 NZ_CP075113.1 RefSeq gene 965805 965963 . - . ID=gene-CCO47_RS24055;Name=CCO47_RS24055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24055 NZ_CP075113.1 Protein Homology CDS 965805 965963 . - 0 ID=cds-WP_223151218.1;Parent=gene-CCO47_RS24055;Dbxref=GenBank:WP_223151218.1;Name=WP_223151218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541719.1;locus_tag=CCO47_RS24055;product=peptidase;protein_id=WP_223151218.1;transl_table=11 NZ_CP075113.1 RefSeq gene 965893 966975 . + . ID=gene-CCO47_RS04615;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=CCO47_RS04615;old_locus_tag=CCO47_04615 NZ_CP075113.1 Protein Homology CDS 965893 966975 . + 0 ID=cds-WP_223151217.1;Parent=gene-CCO47_RS04615;Dbxref=GenBank:WP_223151217.1;Name=WP_223151217.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=CCO47_RS04615;product=murein hydrolase activator NlpD;protein_id=WP_223151217.1;transl_table=11 NZ_CP075113.1 RefSeq gene 967038 968030 . + . ID=gene-CCO47_RS04620;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=CCO47_RS04620;old_locus_tag=CCO47_04620 NZ_CP075113.1 Protein Homology CDS 967038 968030 . + 0 ID=cds-WP_000081498.1;Parent=gene-CCO47_RS04620;Dbxref=GenBank:WP_000081498.1;Name=WP_000081498.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=CCO47_RS04620;product=RNA polymerase sigma factor RpoS;protein_id=WP_000081498.1;transl_table=11 NZ_CP075113.1 RefSeq gene 968075 968311 . - . ID=gene-CCO47_RS04625;Name=CCO47_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04625;old_locus_tag=CCO47_04625 NZ_CP075113.1 Protein Homology CDS 968075 968311 . - 0 ID=cds-WP_000562964.1;Parent=gene-CCO47_RS04625;Dbxref=GenBank:WP_000562964.1;Name=WP_000562964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461844.1;locus_tag=CCO47_RS04625;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=WP_000562964.1;transl_table=11 NZ_CP075113.1 RefSeq gene 968322 969749 . - . ID=gene-CCO47_RS04630;Name=CCO47_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04630;old_locus_tag=CCO47_04630 NZ_CP075113.1 Protein Homology CDS 968322 969749 . - 0 ID=cds-WP_000863168.1;Parent=gene-CCO47_RS04630;Dbxref=GenBank:WP_000863168.1;Name=WP_000863168.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461843.1;locus_tag=CCO47_RS04630;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=WP_000863168.1;transl_table=11 NZ_CP075113.1 RefSeq gene 969749 970342 . - . ID=gene-CCO47_RS04635;Name=CCO47_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04635;old_locus_tag=CCO47_04635 NZ_CP075113.1 Protein Homology CDS 969749 970342 . - 0 ID=cds-WP_001675726.1;Parent=gene-CCO47_RS04635;Dbxref=GenBank:WP_001675726.1;Name=WP_001675726.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461842.1;locus_tag=CCO47_RS04635;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=WP_001675726.1;transl_table=11 NZ_CP075113.1 RefSeq gene 970513 970917 . + . ID=gene-CCO47_RS04640;Name=CCO47_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04640;old_locus_tag=CCO47_04640 NZ_CP075113.1 Protein Homology CDS 970513 970917 . + 0 ID=cds-WP_000423338.1;Parent=gene-CCO47_RS04640;Dbxref=GenBank:WP_000423338.1;Name=WP_000423338.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461841.1;locus_tag=CCO47_RS04640;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_000423338.1;transl_table=11 NZ_CP075113.1 RefSeq gene 970936 971700 . - . ID=gene-CCO47_RS04645;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=CCO47_RS04645;old_locus_tag=CCO47_04645 NZ_CP075113.1 Protein Homology CDS 970936 971700 . - 0 ID=cds-WP_000613179.1;Parent=gene-CCO47_RS04645;Dbxref=GenBank:WP_000613179.1;Name=WP_000613179.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461840.1;locus_tag=CCO47_RS04645;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_000613179.1;transl_table=11 NZ_CP075113.1 RefSeq gene 971897 972820 . + . ID=gene-CCO47_RS04650;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=CCO47_RS04650;old_locus_tag=CCO47_04650 NZ_CP075113.1 Protein Homology CDS 971897 972820 . + 0 ID=cds-WP_000206958.1;Parent=gene-CCO47_RS04650;Dbxref=GenBank:WP_000206958.1;Name=WP_000206958.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461839.1;locus_tag=CCO47_RS04650;product=L-threonate dehydrogenase;protein_id=WP_000206958.1;transl_table=11 NZ_CP075113.1 RefSeq gene 972814 974076 . + . ID=gene-CCO47_RS04655;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=CCO47_RS04655;old_locus_tag=CCO47_04655 NZ_CP075113.1 Protein Homology CDS 972814 974076 . + 0 ID=cds-WP_000912488.1;Parent=gene-CCO47_RS04655;Dbxref=GenBank:WP_000912488.1;Name=WP_000912488.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=CCO47_RS04655;product=3-oxo-tetronate kinase;protein_id=WP_000912488.1;transl_table=11 NZ_CP075113.1 RefSeq gene 974073 974711 . + . ID=gene-CCO47_RS04660;Name=otnC;gbkey=Gene;gene=otnC;gene_biotype=protein_coding;locus_tag=CCO47_RS04660;old_locus_tag=CCO47_04660 NZ_CP075113.1 Protein Homology CDS 974073 974711 . + 0 ID=cds-WP_000209068.1;Parent=gene-CCO47_RS04660;Dbxref=GenBank:WP_000209068.1;Name=WP_000209068.1;Ontology_term=GO:0005996,GO:0016829;gbkey=CDS;gene=otnC;go_function=lyase activity|0016829||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461837.1;locus_tag=CCO47_RS04660;product=3-oxo-tetronate 4-phosphate decarboxylase;protein_id=WP_000209068.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 974716 975491 . + . ID=gene-CCO47_RS04665;Name=CCO47_RS04665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS04665;old_locus_tag=CCO47_04665;pseudo=true NZ_CP075113.1 Protein Homology CDS 974716 975491 . + 0 ID=cds-CCO47_RS04665;Parent=gene-CCO47_RS04665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461836.1;locus_tag=CCO47_RS04665;product=HPr family phosphocarrier protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 975531 976481 . + . ID=gene-CCO47_RS04670;Name=denD;gbkey=Gene;gene=denD;gene_biotype=protein_coding;locus_tag=CCO47_RS04670;old_locus_tag=CCO47_04670 NZ_CP075113.1 Protein Homology CDS 975531 976481 . + 0 ID=cds-WP_001165731.1;Parent=gene-CCO47_RS04670;Dbxref=GenBank:WP_001165731.1;Name=WP_001165731.1;Ontology_term=GO:0005975,GO:0016491;gbkey=CDS;gene=denD;go_function=oxidoreductase activity|0016491||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461835.1;locus_tag=CCO47_RS04670;product=D-erythronate dehydrogenase;protein_id=WP_001165731.1;transl_table=11 NZ_CP075113.1 RefSeq gene 976478 977974 . + . ID=gene-CCO47_RS04675;Name=CCO47_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04675;old_locus_tag=CCO47_04675 NZ_CP075113.1 Protein Homology CDS 976478 977974 . + 0 ID=cds-WP_000202725.1;Parent=gene-CCO47_RS04675;Dbxref=GenBank:WP_000202725.1;Name=WP_000202725.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461834.1;locus_tag=CCO47_RS04675;product=GntP family permease;protein_id=WP_000202725.1;transl_table=11 NZ_CP075113.1 RefSeq gene 978016 978948 . - . ID=gene-CCO47_RS04680;Name=CCO47_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04680;old_locus_tag=CCO47_04680 NZ_CP075113.1 Protein Homology CDS 978016 978948 . - 0 ID=cds-WP_000216291.1;Parent=gene-CCO47_RS04680;Dbxref=GenBank:WP_000216291.1;Name=WP_000216291.1;Ontology_term=GO:0006355,GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216314.1;locus_tag=CCO47_RS04680;product=LysR family transcriptional regulator;protein_id=WP_000216291.1;transl_table=11 NZ_CP075113.1 RefSeq gene 979036 980244 . + . ID=gene-CCO47_RS04685;Name=CCO47_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04685;old_locus_tag=CCO47_04685 NZ_CP075113.1 Protein Homology CDS 979036 980244 . + 0 ID=cds-WP_000222412.1;Parent=gene-CCO47_RS04685;Dbxref=GenBank:WP_000222412.1;Name=WP_000222412.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000222390.1;locus_tag=CCO47_RS04685;product=MFS transporter;protein_id=WP_000222412.1;transl_table=11 NZ_CP075113.1 RefSeq gene 980241 980621 . + . ID=gene-CCO47_RS04690;Name=CCO47_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04690;old_locus_tag=CCO47_04690 NZ_CP075113.1 Protein Homology CDS 980241 980621 . + 0 ID=cds-WP_001070469.1;Parent=gene-CCO47_RS04690;Dbxref=GenBank:WP_001070469.1;Name=WP_001070469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=CCO47_RS04690;product=DUF4440 domain-containing protein;protein_id=WP_001070469.1;transl_table=11 NZ_CP075113.1 RefSeq gene 980677 983244 . - . ID=gene-CCO47_RS04695;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=CCO47_RS04695;old_locus_tag=CCO47_04695 NZ_CP075113.1 Protein Homology CDS 980677 983244 . - 0 ID=cds-WP_001005805.1;Parent=gene-CCO47_RS04695;Dbxref=GenBank:WP_001005805.1;Name=WP_001005805.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461830.1;locus_tag=CCO47_RS04695;product=DNA mismatch repair protein MutS;protein_id=WP_001005805.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 983403 983801 . + . ID=gene-CCO47_RS04700;Name=CCO47_RS04700;end_range=983801,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS04700;old_locus_tag=CCO47_04700;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 983403 983801 . + 0 ID=cds-CCO47_RS04700;Parent=gene-CCO47_RS04700;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=983801,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=CCO47_RS04700;partial=true;product=cytoplasmic protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 984001 984231 . + . ID=gene-CCO47_RS04705;Name=CCO47_RS04705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS04705;old_locus_tag=CCO47_04705;partial=true;pseudo=true;start_range=.,984001 NZ_CP075113.1 Protein Homology CDS 984001 984231 . + 0 ID=cds-CCO47_RS04705;Parent=gene-CCO47_RS04705;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=CCO47_RS04705;partial=true;product=hypothetical protein;pseudo=true;start_range=.,984001;transl_table=11 NZ_CP075113.1 RefSeq gene 984388 985056 . + . ID=gene-CCO47_RS04710;Name=CCO47_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04710;old_locus_tag=CCO47_04710 NZ_CP075113.1 Protein Homology CDS 984388 985056 . + 0 ID=cds-WP_000445914.1;Parent=gene-CCO47_RS04710;Dbxref=GenBank:WP_000445914.1;Name=WP_000445914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000445913.1;locus_tag=CCO47_RS04710;product=hypothetical protein;protein_id=WP_000445914.1;transl_table=11 NZ_CP075113.1 RefSeq gene 985083 985577 . + . ID=gene-CCO47_RS04715;Name=CCO47_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04715;old_locus_tag=CCO47_04715 NZ_CP075113.1 Protein Homology CDS 985083 985577 . + 0 ID=cds-WP_000424948.1;Parent=gene-CCO47_RS04715;Dbxref=GenBank:WP_000424948.1;Name=WP_000424948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001522903.1;locus_tag=CCO47_RS04715;product=hypothetical protein;protein_id=WP_000424948.1;transl_table=11 NZ_CP075113.1 RefSeq gene 985749 986405 . - . ID=gene-CCO47_RS04720;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=CCO47_RS04720;old_locus_tag=CCO47_04720 NZ_CP075113.1 Protein Homology CDS 985749 986405 . - 0 ID=cds-WP_000420452.1;Parent=gene-CCO47_RS04720;Dbxref=GenBank:WP_000420452.1;Name=WP_000420452.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461828.1;locus_tag=CCO47_RS04720;product=protein-serine/threonine phosphatase;protein_id=WP_000420452.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 986632 987047 . + . ID=gene-CCO47_RS04725;Name=CCO47_RS04725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS04725;old_locus_tag=CCO47_04725;partial=true;pseudo=true;start_range=.,986632 NZ_CP075113.1 Protein Homology CDS 986632 987047 . + 0 ID=cds-CCO47_RS04725;Parent=gene-CCO47_RS04725;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025243904.1;locus_tag=CCO47_RS04725;partial=true;product=transposase;pseudo=true;start_range=.,986632;transl_table=11 NZ_CP075113.1 RefSeq gene 987120 987647 . - . ID=gene-CCO47_RS04730;Name=CCO47_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04730;old_locus_tag=CCO47_04730 NZ_CP075113.1 Protein Homology CDS 987120 987647 . - 0 ID=cds-WP_000971649.1;Parent=gene-CCO47_RS04730;Dbxref=GenBank:WP_000971649.1;Name=WP_000971649.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461826.1;locus_tag=CCO47_RS04730;product=GNAT family N-acetyltransferase;protein_id=WP_000971649.1;transl_table=11 NZ_CP075113.1 RefSeq gene 987644 987934 . - . ID=gene-CCO47_RS04735;Name=CCO47_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04735;old_locus_tag=CCO47_04735 NZ_CP075113.1 Protein Homology CDS 987644 987934 . - 0 ID=cds-WP_000855694.1;Parent=gene-CCO47_RS04735;Dbxref=GenBank:WP_000855694.1;Name=WP_000855694.1;Ontology_term=GO:0006355,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461825.1;locus_tag=CCO47_RS04735;product=type II toxin-antitoxin system TacA family antitoxin;protein_id=WP_000855694.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 988204 988382 . - . ID=gene-CCO47_RS04740;Name=CCO47_RS04740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS04740;old_locus_tag=CCO47_04740;partial=true;pseudo=true;start_range=.,988204 NZ_CP075113.1 Protein Homology CDS 988204 988382 . - 0 ID=cds-CCO47_RS04740;Parent=gene-CCO47_RS04740;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612101.1;locus_tag=CCO47_RS04740;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,988204;transl_table=11 NZ_CP075113.1 RefSeq gene 988786 989229 . - . ID=gene-CCO47_RS04745;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=CCO47_RS04745;old_locus_tag=CCO47_04745 NZ_CP075113.1 Protein Homology CDS 988786 989229 . - 0 ID=cds-WP_000715096.1;Parent=gene-CCO47_RS04745;Dbxref=GenBank:WP_000715096.1;Name=WP_000715096.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461821.1;locus_tag=CCO47_RS04745;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=WP_000715096.1;transl_table=11 NZ_CP075113.1 RefSeq gene 989685 990335 . + . ID=gene-CCO47_RS04750;Name=invF;gbkey=Gene;gene=invF;gene_biotype=protein_coding;locus_tag=CCO47_RS04750;old_locus_tag=CCO47_04750 NZ_CP075113.1 Protein Homology CDS 989685 990335 . + 0 ID=cds-WP_001674874.1;Parent=gene-CCO47_RS04750;Dbxref=GenBank:WP_001674874.1;Name=WP_001674874.1;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461820.1;locus_tag=CCO47_RS04750;product=type III secretion system transcriptional activator InvF;protein_id=WP_001674874.1;transl_table=11 NZ_CP075113.1 RefSeq gene 990332 992020 . + . ID=gene-CCO47_RS04755;Name=invG;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=CCO47_RS04755;old_locus_tag=CCO47_04755 NZ_CP075113.1 Protein Homology CDS 990332 992020 . + 0 ID=cds-WP_000848113.1;Parent=gene-CCO47_RS04755;Dbxref=GenBank:WP_000848113.1;Name=WP_000848113.1;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461819.1;locus_tag=CCO47_RS04755;product=type III secretion system outer membrane ring protein InvG;protein_id=WP_000848113.1;transl_table=11 NZ_CP075113.1 RefSeq gene 992017 993135 . + . ID=gene-CCO47_RS04760;Name=invE;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=CCO47_RS04760;old_locus_tag=CCO47_04760 NZ_CP075113.1 Protein Homology CDS 992017 993135 . + 0 ID=cds-WP_000612171.1;Parent=gene-CCO47_RS04760;Dbxref=GenBank:WP_000612171.1;Name=WP_000612171.1;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461818.1;locus_tag=CCO47_RS04760;product=type III secretion system gatekeeper InvE;protein_id=WP_000612171.1;transl_table=11 NZ_CP075113.1 RefSeq gene 993160 995217 . + . ID=gene-CCO47_RS04765;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=CCO47_RS04765;old_locus_tag=CCO47_04765 NZ_CP075113.1 Protein Homology CDS 993160 995217 . + 0 ID=cds-WP_000927212.1;Parent=gene-CCO47_RS04765;Dbxref=GenBank:WP_000927212.1;Name=WP_000927212.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461817.1;locus_tag=CCO47_RS04765;product=type III secretion system export apparatus protein InvA;protein_id=WP_000927212.1;transl_table=11 NZ_CP075113.1 RefSeq gene 995241 995648 . + . ID=gene-CCO47_RS04770;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=protein_coding;locus_tag=CCO47_RS04770;old_locus_tag=CCO47_04770 NZ_CP075113.1 Protein Homology CDS 995241 995648 . + 0 ID=cds-WP_001164066.1;Parent=gene-CCO47_RS04770;Dbxref=GenBank:WP_001164066.1;Name=WP_001164066.1;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461816.1;locus_tag=CCO47_RS04770;product=SPI-1 type III secretion system chaperone SpaK;protein_id=WP_001164066.1;transl_table=11 NZ_CP075113.1 RefSeq gene 995645 996940 . + . ID=gene-CCO47_RS04775;Name=invC;gbkey=Gene;gene=invC;gene_biotype=protein_coding;locus_tag=CCO47_RS04775;old_locus_tag=CCO47_04775 NZ_CP075113.1 Protein Homology CDS 995645 996940 . + 0 ID=cds-WP_000856766.1;Parent=gene-CCO47_RS04775;Dbxref=GenBank:WP_000856766.1;Name=WP_000856766.1;gbkey=CDS;gene=invC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461815.1;locus_tag=CCO47_RS04775;product=SctN family type III secretion system ATPase InvC;protein_id=WP_000856766.1;transl_table=11 NZ_CP075113.1 RefSeq gene 996918 997361 . + . ID=gene-CCO47_RS04780;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=CCO47_RS04780;old_locus_tag=CCO47_04780 NZ_CP075113.1 Protein Homology CDS 996918 997361 . + 0 ID=cds-WP_001520714.1;Parent=gene-CCO47_RS04780;Dbxref=GenBank:WP_001520714.1;Name=WP_001520714.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461814.1;locus_tag=CCO47_RS04780;product=SPI-1 type III secretion system protein SpaM;protein_id=WP_001520714.1;transl_table=11 NZ_CP075113.1 RefSeq gene 997361 998371 . + . ID=gene-CCO47_RS04785;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=protein_coding;locus_tag=CCO47_RS04785;old_locus_tag=CCO47_04785 NZ_CP075113.1 Protein Homology CDS 997361 998371 . + 0 ID=cds-WP_000503105.1;Parent=gene-CCO47_RS04785;Dbxref=GenBank:WP_000503105.1;Name=WP_000503105.1;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461813.1;locus_tag=CCO47_RS04785;product=SPI-1 type III secretion system protein SpaN;protein_id=WP_000503105.1;transl_table=11 NZ_CP075113.1 RefSeq gene 998371 999282 . + . ID=gene-CCO47_RS04790;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=CCO47_RS04790;old_locus_tag=CCO47_04790 NZ_CP075113.1 Protein Homology CDS 998371 999282 . + 0 ID=cds-WP_000058730.1;Parent=gene-CCO47_RS04790;Dbxref=GenBank:WP_000058730.1;Name=WP_000058730.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=CCO47_RS04790;product=SPI-1 type III secretion system protein SpaO;protein_id=WP_000058730.1;transl_table=11 NZ_CP075113.1 RefSeq gene 999272 999946 . + . ID=gene-CCO47_RS04795;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=CCO47_RS04795;old_locus_tag=CCO47_04795 NZ_CP075113.1 Protein Homology CDS 999272 999946 . + 0 ID=cds-WP_000526016.1;Parent=gene-CCO47_RS04795;Dbxref=GenBank:WP_000526016.1;Name=WP_000526016.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461811.1;locus_tag=CCO47_RS04795;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=WP_000526016.1;transl_table=11 NZ_CP075113.1 RefSeq gene 999972 1000232 . + . ID=gene-CCO47_RS04800;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=CCO47_RS04800;old_locus_tag=CCO47_04800 NZ_CP075113.1 Protein Homology CDS 999972 1000232 . + 0 ID=cds-WP_000342503.1;Parent=gene-CCO47_RS04800;Dbxref=GenBank:WP_000342503.1;Name=WP_000342503.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461810.1;locus_tag=CCO47_RS04800;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=WP_000342503.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1000236 1001027 . + . ID=gene-CCO47_RS04805;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=CCO47_RS04805;old_locus_tag=CCO47_04805 NZ_CP075113.1 Protein Homology CDS 1000236 1001027 . + 0 ID=cds-WP_000964940.1;Parent=gene-CCO47_RS04805;Dbxref=GenBank:WP_000964940.1;Name=WP_000964940.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461809.1;locus_tag=CCO47_RS04805;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=WP_000964940.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1001014 1002084 . + . ID=gene-CCO47_RS04810;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=protein_coding;locus_tag=CCO47_RS04810;old_locus_tag=CCO47_04810 NZ_CP075113.1 Protein Homology CDS 1001014 1002084 . + 0 ID=cds-WP_000097719.1;Parent=gene-CCO47_RS04810;Dbxref=GenBank:WP_000097719.1;Name=WP_000097719.1;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461808.1;locus_tag=CCO47_RS04810;product=SPI-1 type III secretion system export apparatus protein SpaS;protein_id=WP_000097719.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1002222 1002719 . + . ID=gene-CCO47_RS04815;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=CCO47_RS04815;old_locus_tag=CCO47_04815 NZ_CP075113.1 Protein Homology CDS 1002222 1002719 . + 0 ID=cds-WP_000386309.1;Parent=gene-CCO47_RS04815;Dbxref=GenBank:WP_000386309.1;Name=WP_000386309.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461807.1;locus_tag=CCO47_RS04815;product=SycD/LcrH family type III secretion system chaperone SicA;protein_id=WP_000386309.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1002722 1004503 . + . ID=gene-CCO47_RS04820;Name=sipB;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=CCO47_RS04820;old_locus_tag=CCO47_04820 NZ_CP075113.1 Protein Homology CDS 1002722 1004503 . + 0 ID=cds-WP_000245788.1;Parent=gene-CCO47_RS04820;Dbxref=GenBank:WP_000245788.1;Name=WP_000245788.1;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461806.1;locus_tag=CCO47_RS04820;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=WP_000245788.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1004531 1005760 . + . ID=gene-CCO47_RS04825;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=protein_coding;locus_tag=CCO47_RS04825;old_locus_tag=CCO47_04825 NZ_CP075113.1 Protein Homology CDS 1004531 1005760 . + 0 ID=cds-WP_000909019.1;Parent=gene-CCO47_RS04825;Dbxref=GenBank:WP_000909019.1;Name=WP_000909019.1;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461805.1;locus_tag=CCO47_RS04825;product=SPI-1 type III secretion system needle tip complex protein SipC;protein_id=WP_000909019.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1005831 1006862 . + . ID=gene-CCO47_RS04830;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=CCO47_RS04830;old_locus_tag=CCO47_04830 NZ_CP075113.1 Protein Homology CDS 1005831 1006862 . + 0 ID=cds-WP_000932249.1;Parent=gene-CCO47_RS04830;Dbxref=GenBank:WP_000932249.1;Name=WP_000932249.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461804.1;locus_tag=CCO47_RS04830;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=WP_000932249.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1006881 1008938 . + . ID=gene-CCO47_RS04835;Name=sipA;gbkey=Gene;gene=sipA;gene_biotype=protein_coding;locus_tag=CCO47_RS04835;old_locus_tag=CCO47_04835 NZ_CP075113.1 Protein Homology CDS 1006881 1008938 . + 0 ID=cds-WP_000258819.1;Parent=gene-CCO47_RS04835;Dbxref=GenBank:WP_000258819.1;Name=WP_000258819.1;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=CCO47_RS04835;product=SPI-1 type III secretion system effector SipA;protein_id=WP_000258819.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1008957 1009205 . + . ID=gene-CCO47_RS04840;Name=CCO47_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04840;old_locus_tag=CCO47_04840 NZ_CP075113.1 Protein Homology CDS 1008957 1009205 . + 0 ID=cds-WP_001055579.1;Parent=gene-CCO47_RS04840;Dbxref=GenBank:WP_001055579.1;Name=WP_001055579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461802.1;locus_tag=CCO47_RS04840;product=acyl carrier protein;protein_id=WP_001055579.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1009249 1009509 . + . ID=gene-CCO47_RS04845;Name=CCO47_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04845;old_locus_tag=CCO47_04845 NZ_CP075113.1 Protein Homology CDS 1009249 1009509 . + 0 ID=cds-WP_000692254.1;Parent=gene-CCO47_RS04845;Dbxref=GenBank:WP_000692254.1;Name=WP_000692254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449260.1;locus_tag=CCO47_RS04845;product=hypothetical protein;protein_id=WP_000692254.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1009536 1009928 . + . ID=gene-CCO47_RS04850;Name=sicP;gbkey=Gene;gene=sicP;gene_biotype=protein_coding;locus_tag=CCO47_RS04850;old_locus_tag=CCO47_04850 NZ_CP075113.1 Protein Homology CDS 1009536 1009928 . + 0 ID=cds-WP_001147852.1;Parent=gene-CCO47_RS04850;Dbxref=GenBank:WP_001147852.1;Name=WP_001147852.1;gbkey=CDS;gene=sicP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=CCO47_RS04850;product=chaperone SicP;protein_id=WP_001147852.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1009915 1011546 . + . ID=gene-CCO47_RS04855;Name=sptP;gbkey=Gene;gene=sptP;gene_biotype=protein_coding;locus_tag=CCO47_RS04855;old_locus_tag=CCO47_04855 NZ_CP075113.1 Protein Homology CDS 1009915 1011546 . + 0 ID=cds-WP_000922298.1;Parent=gene-CCO47_RS04855;Dbxref=GenBank:WP_000922298.1;Name=WP_000922298.1;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540778.1;locus_tag=CCO47_RS04855;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;protein_id=WP_000922298.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1011600 1012082 . - . ID=gene-CCO47_RS04860;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=protein_coding;locus_tag=CCO47_RS04860;old_locus_tag=CCO47_04860 NZ_CP075113.1 Protein Homology CDS 1011600 1012082 . - 0 ID=cds-WP_000558929.1;Parent=gene-CCO47_RS04860;Dbxref=GenBank:WP_000558929.1;Name=WP_000558929.1;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461798.1;locus_tag=CCO47_RS04860;product=SPI-1 type III secretion system invasion protein IagB;protein_id=WP_000558929.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1012100 1013761 . - . ID=gene-CCO47_RS04865;Name=hilA;gbkey=Gene;gene=hilA;gene_biotype=protein_coding;locus_tag=CCO47_RS04865;old_locus_tag=CCO47_04865 NZ_CP075113.1 Protein Homology CDS 1012100 1013761 . - 0 ID=cds-WP_001120085.1;Parent=gene-CCO47_RS04865;Dbxref=GenBank:WP_001120085.1;Name=WP_001120085.1;gbkey=CDS;gene=hilA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461797.1;locus_tag=CCO47_RS04865;product=transcriptional regulator HilA;protein_id=WP_001120085.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1014852 1015781 . - . ID=gene-CCO47_RS04870;Name=hilD;gbkey=Gene;gene=hilD;gene_biotype=protein_coding;locus_tag=CCO47_RS04870;old_locus_tag=CCO47_04870 NZ_CP075113.1 Protein Homology CDS 1014852 1015781 . - 0 ID=cds-WP_000432698.1;Parent=gene-CCO47_RS04870;Dbxref=GenBank:WP_000432698.1;Name=WP_000432698.1;gbkey=CDS;gene=hilD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461796.1;locus_tag=CCO47_RS04870;product=transcriptional regulator HilD;protein_id=WP_000432698.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1016097 1017275 . + . ID=gene-CCO47_RS04875;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=CCO47_RS04875;old_locus_tag=CCO47_04875 NZ_CP075113.1 Protein Homology CDS 1016097 1017275 . + 0 ID=cds-WP_000450199.1;Parent=gene-CCO47_RS04875;Dbxref=GenBank:WP_000450199.1;Name=WP_000450199.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461795.1;locus_tag=CCO47_RS04875;product=type III secretion system inner membrane ring protein PrgH;protein_id=WP_000450199.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1017300 1017542 . + . ID=gene-CCO47_RS04880;Name=prgI;gbkey=Gene;gene=prgI;gene_biotype=protein_coding;locus_tag=CCO47_RS04880;old_locus_tag=CCO47_04880 NZ_CP075113.1 Protein Homology CDS 1017300 1017542 . + 0 ID=cds-WP_000235228.1;Parent=gene-CCO47_RS04880;Dbxref=GenBank:WP_000235228.1;Name=WP_000235228.1;gbkey=CDS;gene=prgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461794.1;locus_tag=CCO47_RS04880;product=type III secretion system needle filament protein PrgI;protein_id=WP_000235228.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1017561 1017866 . + . ID=gene-CCO47_RS04885;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=CCO47_RS04885;old_locus_tag=CCO47_04885 NZ_CP075113.1 Protein Homology CDS 1017561 1017866 . + 0 ID=cds-WP_000020431.1;Parent=gene-CCO47_RS04885;Dbxref=GenBank:WP_000020431.1;Name=WP_000020431.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461793.1;locus_tag=CCO47_RS04885;product=type III secretion system inner rod protein PrgJ;protein_id=WP_000020431.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1017863 1018621 . + . ID=gene-CCO47_RS04890;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=CCO47_RS04890;old_locus_tag=CCO47_04890 NZ_CP075113.1 Protein Homology CDS 1017863 1018621 . + 0 ID=cds-WP_000621238.1;Parent=gene-CCO47_RS04890;Dbxref=GenBank:WP_000621238.1;Name=WP_000621238.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461792.1;locus_tag=CCO47_RS04890;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=WP_000621238.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1018593 1019192 . + . ID=gene-CCO47_RS04895;Name=orgA;gbkey=Gene;gene=orgA;gene_biotype=protein_coding;locus_tag=CCO47_RS04895;old_locus_tag=CCO47_04895 NZ_CP075113.1 Protein Homology CDS 1018593 1019192 . + 0 ID=cds-WP_001574876.1;Parent=gene-CCO47_RS04895;Dbxref=GenBank:WP_001574876.1;Name=WP_001574876.1;gbkey=CDS;gene=orgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=CCO47_RS04895;product=oxygen-regulated invasion protein OrgA;protein_id=WP_001574876.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1019149 1019829 . + . ID=gene-CCO47_RS04900;Name=orgB;gbkey=Gene;gene=orgB;gene_biotype=protein_coding;locus_tag=CCO47_RS04900;old_locus_tag=CCO47_04900 NZ_CP075113.1 Protein Homology CDS 1019149 1019829 . + 0 ID=cds-WP_000916654.1;Parent=gene-CCO47_RS04900;Dbxref=GenBank:WP_000916654.1;Name=WP_000916654.1;gbkey=CDS;gene=orgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461790.1;locus_tag=CCO47_RS04900;product=type III secretion system linker protein OrgB;protein_id=WP_000916654.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1019826 1020278 . + . ID=gene-CCO47_RS04905;Name=CCO47_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04905;old_locus_tag=CCO47_04905 NZ_CP075113.1 Protein Homology CDS 1019826 1020278 . + 0 ID=cds-WP_000612164.1;Parent=gene-CCO47_RS04905;Dbxref=GenBank:WP_000612164.1;Name=WP_000612164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461789.1;locus_tag=CCO47_RS04905;product=type III secretion system effector protein OrgC;protein_id=WP_000612164.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1020623 1021510 . + . ID=gene-CCO47_RS04910;Name=hilC;gbkey=Gene;gene=hilC;gene_biotype=protein_coding;locus_tag=CCO47_RS04910;old_locus_tag=CCO47_04910 NZ_CP075113.1 Protein Homology CDS 1020623 1021510 . + 0 ID=cds-WP_000243998.1;Parent=gene-CCO47_RS04910;Dbxref=GenBank:WP_000243998.1;Name=WP_000243998.1;gbkey=CDS;gene=hilC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461788.1;locus_tag=CCO47_RS04910;product=invasion transcriptional regulator HilC;protein_id=WP_000243998.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1021894 1022649 . + . ID=gene-CCO47_RS04915;Name=sprB;gbkey=Gene;gene=sprB;gene_biotype=protein_coding;locus_tag=CCO47_RS04915;old_locus_tag=CCO47_04915 NZ_CP075113.1 Protein Homology CDS 1021894 1022649 . + 0 ID=cds-WP_001246656.1;Parent=gene-CCO47_RS04915;Dbxref=GenBank:WP_001246656.1;Name=WP_001246656.1;gbkey=CDS;gene=sprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461787.1;locus_tag=CCO47_RS04915;product=transcriptional regulator SprB;protein_id=WP_001246656.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1022810 1023717 . + . ID=gene-CCO47_RS04920;Name=avrA;gbkey=Gene;gene=avrA;gene_biotype=pseudogene;locus_tag=CCO47_RS04920;old_locus_tag=CCO47_04920;pseudo=true NZ_CP075113.1 Protein Homology CDS 1022810 1023717 . + 0 ID=cds-CCO47_RS04920;Parent=gene-CCO47_RS04920;Note=frameshifted;gbkey=CDS;gene=avrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461786.1;locus_tag=CCO47_RS04920;product=type III secretion system YopJ family effector AvrA;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1023816 1024664 . - . ID=gene-CCO47_RS04925;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=CCO47_RS04925;old_locus_tag=CCO47_04925 NZ_CP075113.1 Protein Homology CDS 1023816 1024664 . - 0 ID=cds-WP_000480209.1;Parent=gene-CCO47_RS04925;Dbxref=GenBank:WP_000480209.1;Name=WP_000480209.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461785.1;locus_tag=CCO47_RS04925;product=iron/manganese ABC transporter permease subunit SitD;protein_id=WP_000480209.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1024655 1025515 . - . ID=gene-CCO47_RS04930;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=CCO47_RS04930;old_locus_tag=CCO47_04930 NZ_CP075113.1 Protein Homology CDS 1024655 1025515 . - 0 ID=cds-WP_001104336.1;Parent=gene-CCO47_RS04930;Dbxref=GenBank:WP_001104336.1;Name=WP_001104336.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461784.1;locus_tag=CCO47_RS04930;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WP_001104336.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1025512 1026333 . - . ID=gene-CCO47_RS04935;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=CCO47_RS04935;old_locus_tag=CCO47_04935 NZ_CP075113.1 Protein Homology CDS 1025512 1026333 . - 0 ID=cds-WP_000083151.1;Parent=gene-CCO47_RS04935;Dbxref=GenBank:WP_000083151.1;Name=WP_000083151.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461783.1;locus_tag=CCO47_RS04935;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=WP_000083151.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1026330 1027247 . - . ID=gene-CCO47_RS04940;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=CCO47_RS04940;old_locus_tag=CCO47_04940 NZ_CP075113.1 Protein Homology CDS 1026330 1027247 . - 0 ID=cds-WP_000182930.1;Parent=gene-CCO47_RS04940;Dbxref=GenBank:WP_000182930.1;Name=WP_000182930.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461782.1;locus_tag=CCO47_RS04940;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=WP_000182930.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1027429 1027773 . + . ID=gene-CCO47_RS04945;Name=CCO47_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04945;old_locus_tag=CCO47_04945 NZ_CP075113.1 Protein Homology CDS 1027429 1027773 . + 0 ID=cds-WP_001117938.1;Parent=gene-CCO47_RS04945;Dbxref=GenBank:WP_001117938.1;Name=WP_001117938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461781.1;locus_tag=CCO47_RS04945;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_001117938.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1027835 1029913 . - . ID=gene-CCO47_RS04950;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=CCO47_RS04950;old_locus_tag=CCO47_04950 NZ_CP075113.1 Protein Homology CDS 1027835 1029913 . - 0 ID=cds-WP_000122683.1;Parent=gene-CCO47_RS04950;Dbxref=GenBank:WP_000122683.1;Name=WP_000122683.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=CCO47_RS04950;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_000122683.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1030132 1031142 . - . ID=gene-CCO47_RS04955;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=CCO47_RS04955;old_locus_tag=CCO47_04955 NZ_CP075113.1 Protein Homology CDS 1030132 1031142 . - 0 ID=cds-WP_001059954.1;Parent=gene-CCO47_RS04955;Dbxref=GenBank:WP_001059954.1;Name=WP_001059954.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=CCO47_RS04955;product=hydrogenase expression/formation protein HypE;protein_id=WP_001059954.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1031139 1032260 . - . ID=gene-CCO47_RS04960;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=CCO47_RS04960;old_locus_tag=CCO47_04960 NZ_CP075113.1 Protein Homology CDS 1031139 1032260 . - 0 ID=cds-WP_001212964.1;Parent=gene-CCO47_RS04960;Dbxref=GenBank:WP_001212964.1;Name=WP_001212964.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461778.2;locus_tag=CCO47_RS04960;product=hydrogenase formation protein HypD;protein_id=WP_001212964.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1032260 1032532 . - . ID=gene-CCO47_RS04965;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=CCO47_RS04965;old_locus_tag=CCO47_04965 NZ_CP075113.1 Protein Homology CDS 1032260 1032532 . - 0 ID=cds-WP_000334871.1;Parent=gene-CCO47_RS04965;Dbxref=GenBank:WP_000334871.1;Name=WP_000334871.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461777.1;locus_tag=CCO47_RS04965;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334871.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1032523 1033395 . - . ID=gene-CCO47_RS04970;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=CCO47_RS04970;old_locus_tag=CCO47_04970 NZ_CP075113.1 Protein Homology CDS 1032523 1033395 . - 0 ID=cds-WP_000337639.1;Parent=gene-CCO47_RS04970;Dbxref=GenBank:WP_000337639.1;Name=WP_000337639.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=CCO47_RS04970;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_000337639.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1033464 1033820 . - . ID=gene-CCO47_RS04975;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=CCO47_RS04975;old_locus_tag=CCO47_04975 NZ_CP075113.1 Protein Homology CDS 1033464 1033820 . - 0 ID=cds-WP_000544461.1;Parent=gene-CCO47_RS04975;Dbxref=GenBank:WP_000544461.1;Name=WP_000544461.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461775.1;locus_tag=CCO47_RS04975;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544461.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1034030 1034491 . + . ID=gene-CCO47_RS04980;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=CCO47_RS04980;old_locus_tag=CCO47_04980 NZ_CP075113.1 Protein Homology CDS 1034030 1034491 . + 0 ID=cds-WP_000158074.1;Parent=gene-CCO47_RS04980;Dbxref=GenBank:WP_000158074.1;Name=WP_000158074.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461774.1;locus_tag=CCO47_RS04980;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158074.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1034637 1035245 . + . ID=gene-CCO47_RS04985;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=CCO47_RS04985;old_locus_tag=CCO47_04985 NZ_CP075113.1 Protein Homology CDS 1034637 1035245 . + 0 ID=cds-WP_001079164.1;Parent=gene-CCO47_RS04985;Dbxref=GenBank:WP_001079164.1;Name=WP_001079164.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461773.1;locus_tag=CCO47_RS04985;product=formate hydrogenlyase subunit HycB;protein_id=WP_001079164.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1035245 1037071 . + . ID=gene-CCO47_RS04990;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=CCO47_RS04990;old_locus_tag=CCO47_04990 NZ_CP075113.1 Protein Homology CDS 1035245 1037071 . + 0 ID=cds-WP_000097042.1;Parent=gene-CCO47_RS04990;Dbxref=GenBank:WP_000097042.1;Name=WP_000097042.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=CCO47_RS04990;product=formate hydrogenlyase subunit 3;protein_id=WP_000097042.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1037074 1037997 . + . ID=gene-CCO47_RS04995;Name=CCO47_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS04995;old_locus_tag=CCO47_04995 NZ_CP075113.1 Protein Homology CDS 1037074 1037997 . + 0 ID=cds-WP_000110563.1;Parent=gene-CCO47_RS04995;Dbxref=GenBank:WP_000110563.1;Name=WP_000110563.1;Ontology_term=GO:0022900,GO:0016491,GO:0005886,GO:0016020,GO:1990204;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461771.1;locus_tag=CCO47_RS04995;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_000110563.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1038015 1039724 . + . ID=gene-CCO47_RS05000;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=CCO47_RS05000;old_locus_tag=CCO47_05000 NZ_CP075113.1 Protein Homology CDS 1038015 1039724 . + 0 ID=cds-WP_001288155.1;Parent=gene-CCO47_RS05000;Dbxref=GenBank:WP_001288155.1;Name=WP_001288155.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=CCO47_RS05000;product=formate hydrogenlyase subunit HycE;protein_id=WP_001288155.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1039734 1040276 . + . ID=gene-CCO47_RS05005;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=CCO47_RS05005;old_locus_tag=CCO47_05005 NZ_CP075113.1 Protein Homology CDS 1039734 1040276 . + 0 ID=cds-WP_000493767.1;Parent=gene-CCO47_RS05005;Dbxref=GenBank:WP_000493767.1;Name=WP_000493767.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461769.1;locus_tag=CCO47_RS05005;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493767.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1040276 1041043 . + . ID=gene-CCO47_RS05010;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=CCO47_RS05010;old_locus_tag=CCO47_05010 NZ_CP075113.1 Protein Homology CDS 1040276 1041043 . + 0 ID=cds-WP_000067421.1;Parent=gene-CCO47_RS05010;Dbxref=GenBank:WP_000067421.1;Name=WP_000067421.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461768.1;locus_tag=CCO47_RS05010;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067421.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1041040 1041450 . + . ID=gene-CCO47_RS05015;Name=CCO47_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05015;old_locus_tag=CCO47_05015 NZ_CP075113.1 Protein Homology CDS 1041040 1041450 . + 0 ID=cds-WP_000003725.1;Parent=gene-CCO47_RS05015;Dbxref=GenBank:WP_000003725.1;Name=WP_000003725.1;Ontology_term=GO:0065003;gbkey=CDS;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461767.1;locus_tag=CCO47_RS05015;product=formate hydrogenlyase maturation HycH family protein;protein_id=WP_000003725.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1041443 1041913 . + . ID=gene-CCO47_RS05020;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=CCO47_RS05020;old_locus_tag=CCO47_05020 NZ_CP075113.1 Protein Homology CDS 1041443 1041913 . + 0 ID=cds-WP_000132984.1;Parent=gene-CCO47_RS05020;Dbxref=GenBank:WP_000132984.1;Name=WP_000132984.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461766.1;locus_tag=CCO47_RS05020;product=hydrogenase maturation peptidase HycI;protein_id=WP_000132984.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1041940 1042749 . + . ID=gene-CCO47_RS05025;Name=CCO47_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05025;old_locus_tag=CCO47_05025 NZ_CP075113.1 Protein Homology CDS 1041940 1042749 . + 0 ID=cds-WP_000902283.1;Parent=gene-CCO47_RS05025;Dbxref=GenBank:WP_000902283.1;Name=WP_000902283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461765.1;locus_tag=CCO47_RS05025;product=hypothetical protein;protein_id=WP_000902283.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1042950 1043495 . + . ID=gene-CCO47_RS05030;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=CCO47_RS05030;old_locus_tag=CCO47_05030 NZ_CP075113.1 Protein Homology CDS 1042950 1043495 . + 0 ID=cds-WP_001078792.1;Parent=gene-CCO47_RS05030;Dbxref=GenBank:WP_001078792.1;Name=WP_001078792.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461764.1;locus_tag=CCO47_RS05030;product=electron transport protein HydN;protein_id=WP_001078792.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1043641 1045881 . + . ID=gene-CCO47_RS05035;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=CCO47_RS05035;old_locus_tag=CCO47_05035 NZ_CP075113.1 Protein Homology CDS 1043641 1045881 . + 0 ID=cds-WP_000963410.1;Parent=gene-CCO47_RS05035;Dbxref=GenBank:WP_000963410.1;Name=WP_000963410.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=CCO47_RS05035;product=carbamoyltransferase HypF;protein_id=WP_000963410.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1045978 1047111 . - . ID=gene-CCO47_RS05040;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=CCO47_RS05040;old_locus_tag=CCO47_05040 NZ_CP075113.1 Protein Homology CDS 1045978 1047111 . - 0 ID=cds-WP_000086336.1;Parent=gene-CCO47_RS05040;Dbxref=GenBank:WP_000086336.1;Name=WP_000086336.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461762.1;locus_tag=CCO47_RS05040;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_000086336.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1047108 1048547 . - . ID=gene-CCO47_RS05045;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=CCO47_RS05045;old_locus_tag=CCO47_05045 NZ_CP075113.1 Protein Homology CDS 1047108 1048547 . - 0 ID=cds-WP_000026002.1;Parent=gene-CCO47_RS05045;Dbxref=GenBank:WP_000026002.1;Name=WP_000026002.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461761.1;locus_tag=CCO47_RS05045;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_000026002.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1048733 1050253 . + . ID=gene-CCO47_RS05050;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=CCO47_RS05050;old_locus_tag=CCO47_05050 NZ_CP075113.1 Protein Homology CDS 1048733 1050253 . + 0 ID=cds-WP_000010818.1;Parent=gene-CCO47_RS05050;Dbxref=GenBank:WP_000010818.1;Name=WP_000010818.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=CCO47_RS05050;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_000010818.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1050250 1051215 . - . ID=gene-CCO47_RS05055;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=CCO47_RS05055;old_locus_tag=CCO47_05055 NZ_CP075113.1 Protein Homology CDS 1050250 1051215 . - 0 ID=cds-WP_001278208.1;Parent=gene-CCO47_RS05055;Dbxref=GenBank:WP_001278208.1;Name=WP_001278208.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=CCO47_RS05055;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_001278208.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1051208 1051981 . - . ID=gene-CCO47_RS05060;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=CCO47_RS05060;old_locus_tag=CCO47_05060 NZ_CP075113.1 Protein Homology CDS 1051208 1051981 . - 0 ID=cds-WP_000804536.1;Parent=gene-CCO47_RS05060;Dbxref=GenBank:WP_000804536.1;Name=WP_000804536.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461758.1;locus_tag=CCO47_RS05060;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804536.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1052179 1052538 . - . ID=gene-CCO47_RS05065;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=CCO47_RS05065;old_locus_tag=CCO47_05065 NZ_CP075113.1 Protein Homology CDS 1052179 1052538 . - 0 ID=cds-WP_000255198.1;Parent=gene-CCO47_RS05065;Dbxref=GenBank:WP_000255198.1;Name=WP_000255198.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461757.1;locus_tag=CCO47_RS05065;product=transcriptional regulator GutM;protein_id=WP_000255198.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1052615 1053394 . - . ID=gene-CCO47_RS05070;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=CCO47_RS05070;old_locus_tag=CCO47_05070 NZ_CP075113.1 Protein Homology CDS 1052615 1053394 . - 0 ID=cds-WP_001077370.1;Parent=gene-CCO47_RS05070;Dbxref=GenBank:WP_001077370.1;Name=WP_001077370.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=CCO47_RS05070;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_001077370.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1053406 1053768 . - . ID=gene-CCO47_RS05075;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=CCO47_RS05075;old_locus_tag=CCO47_05075 NZ_CP075113.1 Protein Homology CDS 1053406 1053768 . - 0 ID=cds-WP_000111553.1;Parent=gene-CCO47_RS05075;Dbxref=GenBank:WP_000111553.1;Name=WP_000111553.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=CCO47_RS05075;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_000111553.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1053780 1054751 . - . ID=gene-CCO47_RS05080;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=CCO47_RS05080;old_locus_tag=CCO47_05080 NZ_CP075113.1 Protein Homology CDS 1053780 1054751 . - 0 ID=cds-WP_000199039.1;Parent=gene-CCO47_RS05080;Dbxref=GenBank:WP_000199039.1;Name=WP_000199039.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=CCO47_RS05080;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_000199039.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1054748 1055311 . - . ID=gene-CCO47_RS05085;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=CCO47_RS05085;old_locus_tag=CCO47_05085 NZ_CP075113.1 Protein Homology CDS 1054748 1055311 . - 0 ID=cds-WP_000573335.1;Parent=gene-CCO47_RS05085;Dbxref=GenBank:WP_000573335.1;Name=WP_000573335.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461753.1;locus_tag=CCO47_RS05085;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573335.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1055565 1056644 . + . ID=gene-CCO47_RS05090;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=CCO47_RS05090;old_locus_tag=CCO47_05090 NZ_CP075113.1 Protein Homology CDS 1055565 1056644 . + 0 ID=cds-WP_000476813.1;Parent=gene-CCO47_RS05090;Dbxref=GenBank:WP_000476813.1;Name=WP_000476813.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461752.1;locus_tag=CCO47_RS05090;product=lytic murein transglycosylase B;protein_id=WP_000476813.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1056682 1056927 . - . ID=gene-CCO47_RS24060;Name=CCO47_RS24060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24060 NZ_CP075113.1 Protein Homology CDS 1056682 1056927 . - 0 ID=cds-WP_001519391.1;Parent=gene-CCO47_RS24060;Dbxref=GenBank:WP_001519391.1;Name=WP_001519391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053775.1;locus_tag=CCO47_RS24060;product=hypothetical protein;protein_id=WP_001519391.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1057123 1057620 . + . ID=gene-CCO47_RS05095;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=CCO47_RS05095;old_locus_tag=CCO47_05095 NZ_CP075113.1 Protein Homology CDS 1057123 1057620 . + 0 ID=cds-WP_000132239.1;Parent=gene-CCO47_RS05095;Dbxref=GenBank:WP_000132239.1;Name=WP_000132239.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461751.1;locus_tag=CCO47_RS05095;product=nicotinamide-nucleotide amidase;protein_id=WP_000132239.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1057705 1058766 . + . ID=gene-CCO47_RS05100;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=CCO47_RS05100;old_locus_tag=CCO47_05100 NZ_CP075113.1 Protein Homology CDS 1057705 1058766 . + 0 ID=cds-WP_000963150.1;Parent=gene-CCO47_RS05100;Dbxref=GenBank:WP_000963150.1;Name=WP_000963150.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461750.1;locus_tag=CCO47_RS05100;product=recombinase RecA;protein_id=WP_000963150.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1058883 1059383 . + . ID=gene-CCO47_RS05105;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=CCO47_RS05105;old_locus_tag=CCO47_05105 NZ_CP075113.1 Protein Homology CDS 1058883 1059383 . + 0 ID=cds-WP_001294863.1;Parent=gene-CCO47_RS05105;Dbxref=GenBank:WP_001294863.1;Name=WP_001294863.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461749.1;locus_tag=CCO47_RS05105;product=recombination regulator RecX;protein_id=WP_001294863.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1059619 1062249 . + . ID=gene-CCO47_RS05110;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=CCO47_RS05110;old_locus_tag=CCO47_05110 NZ_CP075113.1 Protein Homology CDS 1059619 1062249 . + 0 ID=cds-WP_000047242.1;Parent=gene-CCO47_RS05110;Dbxref=GenBank:WP_000047242.1;Name=WP_000047242.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=CCO47_RS05110;product=alanine--tRNA ligase;protein_id=WP_000047242.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1062484 1062669 . + . ID=gene-CCO47_RS05115;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=CCO47_RS05115;old_locus_tag=CCO47_05115 NZ_CP075113.1 Protein Homology CDS 1062484 1062669 . + 0 ID=cds-WP_000906486.1;Parent=gene-CCO47_RS05115;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=CCO47_RS05115;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1062973 1063065 . + . ID=gene-CCO47_RS05120;Name=CCO47_RS05120;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS05120;old_locus_tag=CCO47_05120 NZ_CP075113.1 tRNAscan-SE tRNA 1062973 1063065 . + . ID=rna-CCO47_RS05120;Parent=gene-CCO47_RS05120;anticodon=(pos:1063007..1063009);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS05120;product=tRNA-Ser NZ_CP075113.1 tRNAscan-SE exon 1062973 1063065 . + . ID=exon-CCO47_RS05120-1;Parent=rna-CCO47_RS05120;anticodon=(pos:1063007..1063009);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS05120;product=tRNA-Ser NZ_CP075113.1 RefSeq gene 1063069 1063145 . + . ID=gene-CCO47_RS05125;Name=CCO47_RS05125;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS05125;old_locus_tag=CCO47_05125 NZ_CP075113.1 tRNAscan-SE tRNA 1063069 1063145 . + . ID=rna-CCO47_RS05125;Parent=gene-CCO47_RS05125;anticodon=(pos:1063103..1063105);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS05125;product=tRNA-Arg NZ_CP075113.1 tRNAscan-SE exon 1063069 1063145 . + . ID=exon-CCO47_RS05125-1;Parent=rna-CCO47_RS05125;anticodon=(pos:1063103..1063105);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS05125;product=tRNA-Arg NZ_CP075113.1 RefSeq gene 1063207 1063283 . + . ID=gene-CCO47_RS05130;Name=CCO47_RS05130;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS05130;old_locus_tag=CCO47_05130 NZ_CP075113.1 tRNAscan-SE tRNA 1063207 1063283 . + . ID=rna-CCO47_RS05130;Parent=gene-CCO47_RS05130;anticodon=(pos:1063241..1063243);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS05130;product=tRNA-Arg NZ_CP075113.1 tRNAscan-SE exon 1063207 1063283 . + . ID=exon-CCO47_RS05130-1;Parent=rna-CCO47_RS05130;anticodon=(pos:1063241..1063243);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS05130;product=tRNA-Arg NZ_CP075113.1 RefSeq gene 1063346 1063422 . + . ID=gene-CCO47_RS05135;Name=CCO47_RS05135;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS05135;old_locus_tag=CCO47_05135 NZ_CP075113.1 tRNAscan-SE tRNA 1063346 1063422 . + . ID=rna-CCO47_RS05135;Parent=gene-CCO47_RS05135;anticodon=(pos:1063380..1063382);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS05135;product=tRNA-Arg NZ_CP075113.1 tRNAscan-SE exon 1063346 1063422 . + . ID=exon-CCO47_RS05135-1;Parent=rna-CCO47_RS05135;anticodon=(pos:1063380..1063382);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS05135;product=tRNA-Arg NZ_CP075113.1 RefSeq gene 1063485 1063561 . + . ID=gene-CCO47_RS05140;Name=CCO47_RS05140;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS05140;old_locus_tag=CCO47_05140 NZ_CP075113.1 tRNAscan-SE tRNA 1063485 1063561 . + . ID=rna-CCO47_RS05140;Parent=gene-CCO47_RS05140;anticodon=(pos:1063519..1063521);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS05140;product=tRNA-Arg NZ_CP075113.1 tRNAscan-SE exon 1063485 1063561 . + . ID=exon-CCO47_RS05140-1;Parent=rna-CCO47_RS05140;anticodon=(pos:1063519..1063521);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS05140;product=tRNA-Arg NZ_CP075113.1 RefSeq gene 1063791 1064357 . + . ID=gene-CCO47_RS05145;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=CCO47_RS05145;old_locus_tag=CCO47_05145 NZ_CP075113.1 Protein Homology CDS 1063791 1064357 . + 0 ID=cds-WP_000271296.1;Parent=gene-CCO47_RS05145;Dbxref=GenBank:WP_000271296.1;Name=WP_000271296.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461746.1;locus_tag=CCO47_RS05145;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_000271296.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1064354 1064779 . + . ID=gene-CCO47_RS05150;Name=CCO47_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05150;old_locus_tag=CCO47_05150 NZ_CP075113.1 Protein Homology CDS 1064354 1064779 . + 0 ID=cds-WP_001279502.1;Parent=gene-CCO47_RS05150;Dbxref=GenBank:WP_001279502.1;Name=WP_001279502.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461745.1;locus_tag=CCO47_RS05150;product=YqaA family protein;protein_id=WP_001279502.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1064856 1066412 . + . ID=gene-CCO47_RS05155;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=CCO47_RS05155;old_locus_tag=CCO47_05155 NZ_CP075113.1 Protein Homology CDS 1064856 1066412 . + 0 ID=cds-WP_000611821.1;Parent=gene-CCO47_RS05155;Dbxref=GenBank:WP_000611821.1;Name=WP_000611821.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=CCO47_RS05155;product=glutamate--cysteine ligase;protein_id=WP_000611821.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1066562 1067077 . + . ID=gene-CCO47_RS05160;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=CCO47_RS05160;old_locus_tag=CCO47_05160 NZ_CP075113.1 Protein Homology CDS 1066562 1067077 . + 0 ID=cds-WP_001130194.1;Parent=gene-CCO47_RS05160;Dbxref=GenBank:WP_001130194.1;Name=WP_001130194.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=CCO47_RS05160;product=S-ribosylhomocysteine lyase;protein_id=WP_001130194.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1067423 1068793 . + . ID=gene-CCO47_RS05165;Name=CCO47_RS05165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS05165;old_locus_tag=CCO47_05165;pseudo=true NZ_CP075113.1 Protein Homology CDS 1067423 1068793 . + 0 ID=cds-CCO47_RS05165;Parent=gene-CCO47_RS05165;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=CCO47_RS05165;product=carbohydrate porin;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1068842 1070380 . - . ID=gene-CCO47_RS05170;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=CCO47_RS05170;old_locus_tag=CCO47_05170 NZ_CP075113.1 Protein Homology CDS 1068842 1070380 . - 0 ID=cds-WP_001187291.1;Parent=gene-CCO47_RS05170;Dbxref=GenBank:WP_001187291.1;Name=WP_001187291.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461741.1;locus_tag=CCO47_RS05170;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_001187291.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1070397 1071569 . - . ID=gene-CCO47_RS05175;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=CCO47_RS05175;old_locus_tag=CCO47_05175 NZ_CP075113.1 Protein Homology CDS 1070397 1071569 . - 0 ID=cds-WP_001275605.1;Parent=gene-CCO47_RS05175;Dbxref=GenBank:WP_001275605.1;Name=WP_001275605.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=CCO47_RS05175;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_001275605.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1071696 1072226 . - . ID=gene-CCO47_RS05180;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=CCO47_RS05180;old_locus_tag=CCO47_05180 NZ_CP075113.1 Protein Homology CDS 1071696 1072226 . - 0 ID=cds-WP_000378428.1;Parent=gene-CCO47_RS05180;Dbxref=GenBank:WP_000378428.1;Name=WP_000378428.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461739.1;locus_tag=CCO47_RS05180;product=transcriptional repressor MprA;protein_id=WP_000378428.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1072723 1073907 . - . ID=gene-CCO47_RS05185;Name=CCO47_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05185;old_locus_tag=CCO47_05185 NZ_CP075113.1 Protein Homology CDS 1072723 1073907 . - 0 ID=cds-WP_000165776.1;Parent=gene-CCO47_RS05185;Dbxref=GenBank:WP_000165776.1;Name=WP_000165776.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461738.1;locus_tag=CCO47_RS05185;product=MFS transporter;protein_id=WP_000165776.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1074072 1075067 . - . ID=gene-CCO47_RS05190;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=CCO47_RS05190;old_locus_tag=CCO47_05190 NZ_CP075113.1 Protein Homology CDS 1074072 1075067 . - 0 ID=cds-WP_001216621.1;Parent=gene-CCO47_RS05190;Dbxref=GenBank:WP_001216621.1;Name=WP_001216621.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461737.1;locus_tag=CCO47_RS05190;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216621.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1075137 1076201 . - . ID=gene-CCO47_RS05195;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=CCO47_RS05195;old_locus_tag=CCO47_05195 NZ_CP075113.1 Protein Homology CDS 1075137 1076201 . - 0 ID=cds-WP_000775022.1;Parent=gene-CCO47_RS05195;Dbxref=GenBank:WP_000775022.1;Name=WP_000775022.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461736.1;locus_tag=CCO47_RS05195;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_000775022.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1076194 1077396 . - . ID=gene-CCO47_RS05200;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=CCO47_RS05200;old_locus_tag=CCO47_05200 NZ_CP075113.1 Protein Homology CDS 1076194 1077396 . - 0 ID=cds-WP_000985529.1;Parent=gene-CCO47_RS05200;Dbxref=GenBank:WP_000985529.1;Name=WP_000985529.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=CCO47_RS05200;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_000985529.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1077751 1078710 . - . ID=gene-CCO47_RS05205;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=CCO47_RS05205;old_locus_tag=CCO47_05205 NZ_CP075113.1 Protein Homology CDS 1077751 1078710 . - 0 ID=cds-WP_000777909.1;Parent=gene-CCO47_RS05205;Dbxref=GenBank:WP_000777909.1;Name=WP_000777909.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461734.1;locus_tag=CCO47_RS05205;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000777909.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1078721 1080838 . - . ID=gene-CCO47_RS05210;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=CCO47_RS05210;old_locus_tag=CCO47_05210 NZ_CP075113.1 Protein Homology CDS 1078721 1080838 . - 0 ID=cds-WP_001752465.1;Parent=gene-CCO47_RS05210;Dbxref=GenBank:WP_001752465.1;Name=WP_001752465.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526351.1;locus_tag=CCO47_RS05210;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001752465.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1080838 1081248 . - . ID=gene-CCO47_RS05215;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=CCO47_RS05215;old_locus_tag=CCO47_05215 NZ_CP075113.1 Protein Homology CDS 1080838 1081248 . - 0 ID=cds-WP_001275410.1;Parent=gene-CCO47_RS05215;Dbxref=GenBank:WP_001275410.1;Name=WP_001275410.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461732.1;locus_tag=CCO47_RS05215;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_001275410.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1081245 1081490 . - . ID=gene-CCO47_RS05220;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=CCO47_RS05220;old_locus_tag=CCO47_05220 NZ_CP075113.1 Protein Homology CDS 1081245 1081490 . - 0 ID=cds-WP_000028874.1;Parent=gene-CCO47_RS05220;Dbxref=GenBank:WP_000028874.1;Name=WP_000028874.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461731.1;locus_tag=CCO47_RS05220;product=glutaredoxin-like protein NrdH;protein_id=WP_000028874.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1081762 1082193 . - . ID=gene-CCO47_RS05225;Name=CCO47_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05225;old_locus_tag=CCO47_05225 NZ_CP075113.1 Protein Homology CDS 1081762 1082193 . - 0 ID=cds-WP_000209807.1;Parent=gene-CCO47_RS05225;Dbxref=GenBank:WP_000209807.1;Name=WP_000209807.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461730.1;locus_tag=CCO47_RS05225;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000209807.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1082282 1083616 . + . ID=gene-CCO47_RS05230;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=CCO47_RS05230;old_locus_tag=CCO47_05230 NZ_CP075113.1 Protein Homology CDS 1082282 1083616 . + 0 ID=cds-WP_001138479.1;Parent=gene-CCO47_RS05230;Dbxref=GenBank:WP_001138479.1;Name=WP_001138479.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=CCO47_RS05230;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_001138479.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1083700 1084026 . - . ID=gene-CCO47_RS05235;Name=CCO47_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05235;old_locus_tag=CCO47_05235 NZ_CP075113.1 Protein Homology CDS 1083700 1084026 . - 0 ID=cds-WP_001519557.1;Parent=gene-CCO47_RS05235;Dbxref=GenBank:WP_001519557.1;Name=WP_001519557.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528627.1;locus_tag=CCO47_RS05235;product=ElaB/YgaM/YqjD family protein;protein_id=WP_001519557.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1084188 1084538 . + . ID=gene-CCO47_RS05240;Name=CCO47_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05240;old_locus_tag=CCO47_05240 NZ_CP075113.1 Protein Homology CDS 1084188 1084538 . + 0 ID=cds-WP_000281305.1;Parent=gene-CCO47_RS05240;Dbxref=GenBank:WP_000281305.1;Name=WP_000281305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461727.1;locus_tag=CCO47_RS05240;product=DUF2002 family protein;protein_id=WP_000281305.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1084573 1085022 . - . ID=gene-CCO47_RS05245;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=CCO47_RS05245;old_locus_tag=CCO47_05245 NZ_CP075113.1 Protein Homology CDS 1084573 1085022 . - 0 ID=cds-WP_000492669.1;Parent=gene-CCO47_RS05245;Dbxref=GenBank:WP_000492669.1;Name=WP_000492669.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=CCO47_RS05245;product=L-alanine exporter AlaE;protein_id=WP_000492669.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1085720 1086121 . + . ID=gene-CCO47_RS05250;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=CCO47_RS05250;old_locus_tag=CCO47_05250 NZ_CP075113.1 Protein Homology CDS 1085720 1086121 . + 0 ID=cds-WP_001051100.1;Parent=gene-CCO47_RS05250;Dbxref=GenBank:WP_001051100.1;Name=WP_001051100.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461725.1;locus_tag=CCO47_RS05250;product=DNA-binding protein StpA;protein_id=WP_001051100.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1086211 1086390 . - . ID=gene-CCO47_RS05255;Name=CCO47_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05255;old_locus_tag=CCO47_05255 NZ_CP075113.1 Protein Homology CDS 1086211 1086390 . - 0 ID=cds-WP_000494942.1;Parent=gene-CCO47_RS05255;Dbxref=GenBank:WP_000494942.1;Name=WP_000494942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494935.1;locus_tag=CCO47_RS05255;product=hypothetical protein;protein_id=WP_000494942.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1086469 1086996 . - . ID=gene-CCO47_RS05260;Name=CCO47_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05260;old_locus_tag=CCO47_05260 NZ_CP075113.1 Protein Homology CDS 1086469 1086996 . - 0 ID=cds-WP_000022011.1;Parent=gene-CCO47_RS05260;Dbxref=GenBank:WP_000022011.1;Name=WP_000022011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461724.1;locus_tag=CCO47_RS05260;product=rhodanese family protein;protein_id=WP_000022011.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1087006 1087305 . - . ID=gene-CCO47_RS05265;Name=CCO47_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05265;old_locus_tag=CCO47_05265 NZ_CP075113.1 Protein Homology CDS 1087006 1087305 . - 0 ID=cds-WP_000137432.1;Parent=gene-CCO47_RS05265;Dbxref=GenBank:WP_000137432.1;Name=WP_000137432.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461723.1;locus_tag=CCO47_RS05265;product=ArsR/SmtB family transcription factor;protein_id=WP_000137432.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1087488 1087646 . + . ID=gene-CCO47_RS05270;Name=CCO47_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05270;old_locus_tag=CCO47_05270 NZ_CP075113.1 Protein Homology CDS 1087488 1087646 . + 0 ID=cds-WP_000508175.1;Parent=gene-CCO47_RS05270;Dbxref=GenBank:WP_000508175.1;Name=WP_000508175.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461722.1;locus_tag=CCO47_RS05270;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508175.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1087746 1088195 . + . ID=gene-CCO47_RS05275;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=CCO47_RS05275;old_locus_tag=CCO47_05275 NZ_CP075113.1 Protein Homology CDS 1087746 1088195 . + 0 ID=cds-WP_000522406.1;Parent=gene-CCO47_RS05275;Dbxref=GenBank:WP_000522406.1;Name=WP_000522406.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=CCO47_RS05275;product=peptidoglycan-binding protein LysM;protein_id=WP_000522406.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1088217 1088894 . - . ID=gene-CCO47_RS05280;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=CCO47_RS05280;old_locus_tag=CCO47_05280 NZ_CP075113.1 Protein Homology CDS 1088217 1088894 . - 0 ID=cds-WP_000126150.1;Parent=gene-CCO47_RS05280;Dbxref=GenBank:WP_000126150.1;Name=WP_000126150.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461720.1;locus_tag=CCO47_RS05280;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000126150.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1088936 1090336 . - . ID=gene-CCO47_RS05285;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=CCO47_RS05285;old_locus_tag=CCO47_05285 NZ_CP075113.1 Protein Homology CDS 1088936 1090336 . - 0 ID=cds-WP_000531282.1;Parent=gene-CCO47_RS05285;Dbxref=GenBank:WP_000531282.1;Name=WP_000531282.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461719.1;locus_tag=CCO47_RS05285;product=GABA permease;protein_id=WP_000531282.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1090466 1091749 . - . ID=gene-CCO47_RS05290;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=CCO47_RS05290;old_locus_tag=CCO47_05290 NZ_CP075113.1 Protein Homology CDS 1090466 1091749 . - 0 ID=cds-WP_001675477.1;Parent=gene-CCO47_RS05290;Dbxref=GenBank:WP_001675477.1;Name=WP_001675477.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=CCO47_RS05290;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_001675477.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1091764 1093212 . - . ID=gene-CCO47_RS05295;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=CCO47_RS05295;old_locus_tag=CCO47_05295 NZ_CP075113.1 Protein Homology CDS 1091764 1093212 . - 0 ID=cds-WP_001176527.1;Parent=gene-CCO47_RS05295;Dbxref=GenBank:WP_001176527.1;Name=WP_001176527.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461717.1;locus_tag=CCO47_RS05295;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_001176527.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1093234 1094502 . - . ID=gene-CCO47_RS05300;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=CCO47_RS05300;old_locus_tag=CCO47_05300 NZ_CP075113.1 Protein Homology CDS 1093234 1094502 . - 0 ID=cds-WP_000271918.1;Parent=gene-CCO47_RS05300;Dbxref=GenBank:WP_000271918.1;Name=WP_000271918.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461716.1;locus_tag=CCO47_RS05300;product=L-2-hydroxyglutarate oxidase;protein_id=WP_000271918.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1094528 1095504 . - . ID=gene-CCO47_RS05305;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=pseudogene;locus_tag=CCO47_RS05305;old_locus_tag=CCO47_05305;pseudo=true NZ_CP075113.1 Protein Homology CDS 1094528 1095504 . - 0 ID=cds-CCO47_RS05305;Parent=gene-CCO47_RS05305;Note=frameshifted;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=CCO47_RS05305;product=glutarate dioxygenase GlaH;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1095808 1097322 . - . ID=gene-CCO47_RS05310;Name=CCO47_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05310;old_locus_tag=CCO47_05310 NZ_CP075113.1 Protein Homology CDS 1095808 1097322 . - 0 ID=cds-WP_000382035.1;Parent=gene-CCO47_RS05310;Dbxref=GenBank:WP_000382035.1;Name=WP_000382035.1;Ontology_term=GO:0006810,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=CCO47_RS05310;product=tripartite tricarboxylate transporter permease;protein_id=WP_000382035.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1097333 1097767 . - . ID=gene-CCO47_RS05315;Name=CCO47_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05315;old_locus_tag=CCO47_05315 NZ_CP075113.1 Protein Homology CDS 1097333 1097767 . - 0 ID=cds-WP_001574835.1;Parent=gene-CCO47_RS05315;Dbxref=GenBank:WP_001574835.1;Name=WP_001574835.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=CCO47_RS05315;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_001574835.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1097779 1098756 . - . ID=gene-CCO47_RS05320;Name=CCO47_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05320;old_locus_tag=CCO47_05320 NZ_CP075113.1 Protein Homology CDS 1097779 1098756 . - 0 ID=cds-WP_000744416.1;Parent=gene-CCO47_RS05320;Dbxref=GenBank:WP_000744416.1;Name=WP_000744416.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=CCO47_RS05320;product=Bug family tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_000744416.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1098911 1099585 . + . ID=gene-CCO47_RS05325;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=CCO47_RS05325;old_locus_tag=CCO47_05325 NZ_CP075113.1 Protein Homology CDS 1098911 1099585 . + 0 ID=cds-WP_001237934.1;Parent=gene-CCO47_RS05325;Dbxref=GenBank:WP_001237934.1;Name=WP_001237934.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=CCO47_RS05325;product=transcriptional regulator TctD;protein_id=WP_001237934.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1099572 1100987 . + . ID=gene-CCO47_RS05330;Name=CCO47_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05330;old_locus_tag=CCO47_05330 NZ_CP075113.1 Protein Homology CDS 1099572 1100987 . + 0 ID=cds-WP_000872348.1;Parent=gene-CCO47_RS05330;Dbxref=GenBank:WP_000872348.1;Name=WP_000872348.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461710.1;locus_tag=CCO47_RS05330;product=sensor histidine kinase;protein_id=WP_000872348.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1101120 1102133 . + . ID=gene-CCO47_RS05335;Name=CCO47_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05335;old_locus_tag=CCO47_05335 NZ_CP075113.1 Protein Homology CDS 1101120 1102133 . + 0 ID=cds-WP_001059351.1;Parent=gene-CCO47_RS05335;Dbxref=GenBank:WP_001059351.1;Name=WP_001059351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=CCO47_RS05335;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_001059351.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1102855 1103751 . - . ID=gene-CCO47_RS05340;Name=CCO47_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05340;old_locus_tag=CCO47_05340 NZ_CP075113.1 Protein Homology CDS 1102855 1103751 . - 0 ID=cds-WP_000701510.1;Parent=gene-CCO47_RS05340;Dbxref=GenBank:WP_000701510.1;Name=WP_000701510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461708.1;locus_tag=CCO47_RS05340;product=antimicrobial resistance protein Mig-14;protein_id=WP_000701510.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1104045 1104974 . - . ID=gene-CCO47_RS05345;Name=CCO47_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05345;old_locus_tag=CCO47_05345 NZ_CP075113.1 Protein Homology CDS 1104045 1104974 . - 0 ID=cds-WP_000178740.1;Parent=gene-CCO47_RS05345;Dbxref=GenBank:WP_000178740.1;Name=WP_000178740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461707.1;locus_tag=CCO47_RS05345;product=VirK family antimicrobial peptide resistance protein;protein_id=WP_000178740.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1105493 1106545 . + . ID=gene-CCO47_RS05350;Name=pipB2;gbkey=Gene;gene=pipB2;gene_biotype=protein_coding;locus_tag=CCO47_RS05350;old_locus_tag=CCO47_05350 NZ_CP075113.1 Protein Homology CDS 1105493 1106545 . + 0 ID=cds-WP_001675481.1;Parent=gene-CCO47_RS05350;Dbxref=GenBank:WP_001675481.1;Name=WP_001675481.1;gbkey=CDS;gene=pipB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461706.1;locus_tag=CCO47_RS05350;product=SPI-2 type III secretion system effector PipB2;protein_id=WP_001675481.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1106720 1107052 . + . ID=gene-CCO47_RS05355;Name=CCO47_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05355;old_locus_tag=CCO47_05355 NZ_CP075113.1 Protein Homology CDS 1106720 1107052 . + 0 ID=cds-WP_077906643.1;Parent=gene-CCO47_RS05355;Dbxref=GenBank:WP_077906643.1;Name=WP_077906643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449164.1;locus_tag=CCO47_RS05355;product=hypothetical protein;protein_id=WP_077906643.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1107584 1109758 . + . ID=gene-CCO47_RS05360;Name=CCO47_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05360;old_locus_tag=CCO47_05360 NZ_CP075113.1 Protein Homology CDS 1107584 1109758 . + 0 ID=cds-WP_001675482.1;Parent=gene-CCO47_RS05360;Dbxref=GenBank:WP_001675482.1;Name=WP_001675482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542215.1;locus_tag=CCO47_RS05360;product=TonB-dependent siderophore receptor;protein_id=WP_001675482.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1109800 1110729 . - . ID=gene-CCO47_RS05365;Name=CCO47_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05365;old_locus_tag=CCO47_05365 NZ_CP075113.1 Protein Homology CDS 1109800 1110729 . - 0 ID=cds-WP_000274364.1;Parent=gene-CCO47_RS05365;Dbxref=GenBank:WP_000274364.1;Name=WP_000274364.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461703.1;locus_tag=CCO47_RS05365;product=alpha/beta hydrolase;protein_id=WP_000274364.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1110761 1112005 . - . ID=gene-CCO47_RS05370;Name=CCO47_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05370;old_locus_tag=CCO47_05370 NZ_CP075113.1 Protein Homology CDS 1110761 1112005 . - 0 ID=cds-WP_001239935.1;Parent=gene-CCO47_RS05370;Dbxref=GenBank:WP_001239935.1;Name=WP_001239935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461702.1;locus_tag=CCO47_RS05370;product=alpha/beta hydrolase-fold protein;protein_id=WP_001239935.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1112115 1115771 . - . ID=gene-CCO47_RS05375;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=protein_coding;locus_tag=CCO47_RS05375;old_locus_tag=CCO47_05375 NZ_CP075113.1 Protein Homology CDS 1112115 1115771 . - 0 ID=cds-WP_001111816.1;Parent=gene-CCO47_RS05375;Dbxref=GenBank:WP_001111816.1;Name=WP_001111816.1;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461701.1;locus_tag=CCO47_RS05375;product=salmochelin/enterobactin export ABC transporter IroC;protein_id=WP_001111816.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1115852 1116967 . - . ID=gene-CCO47_RS05380;Name=iroB;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=CCO47_RS05380;old_locus_tag=CCO47_05380 NZ_CP075113.1 Protein Homology CDS 1115852 1116967 . - 0 ID=cds-WP_001221120.1;Parent=gene-CCO47_RS05380;Dbxref=GenBank:WP_001221120.1;Name=WP_001221120.1;gbkey=CDS;gene=iroB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461700.1;locus_tag=CCO47_RS05380;product=salmochelin biosynthesis C-glycosyltransferase IroB;protein_id=WP_001221120.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1117593 1117973 . - . ID=gene-CCO47_RS05385;Name=tnpA;end_range=1117973,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=CCO47_RS05385;old_locus_tag=CCO47_05385;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 1117593 1117973 . - 0 ID=cds-CCO47_RS05385;Parent=gene-CCO47_RS05385;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=1117973,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=CCO47_RS05385;partial=true;product=IS200/IS605-like element IS200F family transposase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1118052 1119163 . + . ID=gene-CCO47_RS05390;Name=CCO47_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05390;old_locus_tag=CCO47_05390 NZ_CP075113.1 Protein Homology CDS 1118052 1118313 . + 0 ID=cds-WP_089113803.1;Parent=gene-CCO47_RS05390;Dbxref=GenBank:WP_089113803.1;Name=WP_089113803.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611500.1;locus_tag=CCO47_RS05390;product=IS3-like element IS1351 family transposase;protein_id=WP_089113803.1;transl_table=11 NZ_CP075113.1 Protein Homology CDS 1118313 1119163 . + 2 ID=cds-WP_089113803.1;Parent=gene-CCO47_RS05390;Dbxref=GenBank:WP_089113803.1;Name=WP_089113803.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611500.1;locus_tag=CCO47_RS05390;product=IS3-like element IS1351 family transposase;protein_id=WP_089113803.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1119179 1119262 . - . ID=gene-CCO47_RS05395;Name=CCO47_RS05395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS05395;old_locus_tag=CCO47_05395;partial=true;pseudo=true;start_range=.,1119179 NZ_CP075113.1 Protein Homology CDS 1119179 1119262 . - 0 ID=cds-CCO47_RS05395;Parent=gene-CCO47_RS05395;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=CCO47_RS05395;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,1119179;transl_table=11 NZ_CP075113.1 RefSeq gene 1119959 1120762 . - . ID=gene-CCO47_RS05400;Name=CCO47_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05400;old_locus_tag=CCO47_05400 NZ_CP075113.1 Protein Homology CDS 1119959 1120762 . - 0 ID=cds-WP_000445376.1;Parent=gene-CCO47_RS05400;Dbxref=GenBank:WP_000445376.1;Name=WP_000445376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000445378.1;locus_tag=CCO47_RS05400;product=DUF3800 domain-containing protein;protein_id=WP_000445376.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1121161 1121754 . - . ID=gene-CCO47_RS05405;Name=CCO47_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05405;old_locus_tag=CCO47_05405 NZ_CP075113.1 Protein Homology CDS 1121161 1121754 . - 0 ID=cds-WP_001142974.1;Parent=gene-CCO47_RS05405;Dbxref=GenBank:WP_001142974.1;Name=WP_001142974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001142974.1;locus_tag=CCO47_RS05405;product=hypothetical protein;protein_id=WP_001142974.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1122014 1123039 . - . ID=gene-CCO47_RS05410;Name=CCO47_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05410;old_locus_tag=CCO47_05410 NZ_CP075113.1 Protein Homology CDS 1122014 1123039 . - 0 ID=cds-WP_001574821.1;Parent=gene-CCO47_RS05410;Dbxref=GenBank:WP_001574821.1;Name=WP_001574821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461666.1;locus_tag=CCO47_RS05410;product=site-specific integrase;protein_id=WP_001574821.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1123043 1123675 . - . ID=gene-CCO47_RS05415;Name=CCO47_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05415;old_locus_tag=CCO47_05415 NZ_CP075113.1 Protein Homology CDS 1123043 1123675 . - 0 ID=cds-WP_000052559.1;Parent=gene-CCO47_RS05415;Dbxref=GenBank:WP_000052559.1;Name=WP_000052559.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461665.1;locus_tag=CCO47_RS05415;product=helix-turn-helix domain-containing protein;protein_id=WP_000052559.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1123792 1124031 . + . ID=gene-CCO47_RS05420;Name=CCO47_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05420;old_locus_tag=CCO47_05420 NZ_CP075113.1 Protein Homology CDS 1123792 1124031 . + 0 ID=cds-WP_000102104.1;Parent=gene-CCO47_RS05420;Dbxref=GenBank:WP_000102104.1;Name=WP_000102104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461664.1;locus_tag=CCO47_RS05420;product=hypothetical protein;protein_id=WP_000102104.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1124067 1124577 . + . ID=gene-CCO47_RS05425;Name=CCO47_RS05425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS05425;old_locus_tag=CCO47_05425;pseudo=true NZ_CP075113.1 Protein Homology CDS 1124067 1124577 . + 0 ID=cds-CCO47_RS05425;Parent=gene-CCO47_RS05425;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461663.1;locus_tag=CCO47_RS05425;product=phage regulatory CII family protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1124585 1124818 . + . ID=gene-CCO47_RS05430;Name=CCO47_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05430;old_locus_tag=CCO47_05430 NZ_CP075113.1 Protein Homology CDS 1124585 1124818 . + 0 ID=cds-WP_000957775.1;Parent=gene-CCO47_RS05430;Dbxref=GenBank:WP_000957775.1;Name=WP_000957775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461662.1;locus_tag=CCO47_RS05430;product=phage filamentation protein Fil family protein;protein_id=WP_000957775.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1124766 1125224 . - . ID=gene-CCO47_RS05435;Name=CCO47_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05435;old_locus_tag=CCO47_05435 NZ_CP075113.1 Protein Homology CDS 1124766 1125224 . - 0 ID=cds-WP_000166366.1;Parent=gene-CCO47_RS05435;Dbxref=GenBank:WP_000166366.1;Name=WP_000166366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461661.1;locus_tag=CCO47_RS05435;product=hypothetical protein;protein_id=WP_000166366.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1125444 1125785 . + . ID=gene-CCO47_RS05440;Name=CCO47_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05440;old_locus_tag=CCO47_05440 NZ_CP075113.1 Protein Homology CDS 1125444 1125785 . + 0 ID=cds-WP_000963195.1;Parent=gene-CCO47_RS05440;Dbxref=GenBank:WP_000963195.1;Name=WP_000963195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461660.1;locus_tag=CCO47_RS05440;product=DUF5347 domain-containing protein;protein_id=WP_000963195.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1125853 1126086 . + . ID=gene-CCO47_RS05445;Name=CCO47_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05445;old_locus_tag=CCO47_05445 NZ_CP075113.1 Protein Homology CDS 1125853 1126086 . + 0 ID=cds-WP_001244234.1;Parent=gene-CCO47_RS05445;Dbxref=GenBank:WP_001244234.1;Name=WP_001244234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461659.1;locus_tag=CCO47_RS05445;product=DUF2732 domain-containing protein;protein_id=WP_001244234.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1126086 1126313 . + . ID=gene-CCO47_RS05450;Name=CCO47_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05450;old_locus_tag=CCO47_05450 NZ_CP075113.1 Protein Homology CDS 1126086 1126313 . + 0 ID=cds-WP_000785509.1;Parent=gene-CCO47_RS05450;Dbxref=GenBank:WP_000785509.1;Name=WP_000785509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461658.1;locus_tag=CCO47_RS05450;product=TraR/DksA family transcriptional regulator;protein_id=WP_000785509.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1126310 1127167 . + . ID=gene-CCO47_RS05455;Name=CCO47_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05455;old_locus_tag=CCO47_05455 NZ_CP075113.1 Protein Homology CDS 1126310 1127167 . + 0 ID=cds-WP_000104186.1;Parent=gene-CCO47_RS05455;Dbxref=GenBank:WP_000104186.1;Name=WP_000104186.1;Ontology_term=GO:0032259,GO:0032775,GO:0008757,GO:0009007,GO:0043565,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,sequence-specific DNA binding|0043565||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA,obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000104187.1;locus_tag=CCO47_RS05455;product=DNA adenine methylase;protein_id=WP_000104186.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1127164 1129560 . + . ID=gene-CCO47_RS05460;Name=CCO47_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05460;old_locus_tag=CCO47_05460 NZ_CP075113.1 Protein Homology CDS 1127164 1129560 . + 0 ID=cds-WP_000017509.1;Parent=gene-CCO47_RS05460;Dbxref=GenBank:WP_000017509.1;Name=WP_000017509.1;Ontology_term=GO:0006260,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000017506.1;locus_tag=CCO47_RS05460;product=replication endonuclease;protein_id=WP_000017509.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1129716 1129904 . + . ID=gene-CCO47_RS05465;Name=CCO47_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05465;old_locus_tag=CCO47_05465 NZ_CP075113.1 Protein Homology CDS 1129716 1129904 . + 0 ID=cds-WP_001154444.1;Parent=gene-CCO47_RS05465;Dbxref=GenBank:WP_001154444.1;Name=WP_001154444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406337.1;locus_tag=CCO47_RS05465;product=hypothetical protein;protein_id=WP_001154444.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1129973 1130272 . - . ID=gene-CCO47_RS05470;Name=CCO47_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05470;old_locus_tag=CCO47_05470 NZ_CP075113.1 GeneMarkS-2+ CDS 1129973 1130272 . - 0 ID=cds-WP_000790439.1;Parent=gene-CCO47_RS05470;Dbxref=GenBank:WP_000790439.1;Name=WP_000790439.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO47_RS05470;product=hypothetical protein;protein_id=WP_000790439.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1130383 1131189 . - . ID=gene-CCO47_RS05475;Name=CCO47_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05475;old_locus_tag=CCO47_05475 NZ_CP075113.1 Protein Homology CDS 1130383 1131189 . - 0 ID=cds-WP_001751928.1;Parent=gene-CCO47_RS05475;Dbxref=GenBank:WP_001751928.1;Name=WP_001751928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751928.1;locus_tag=CCO47_RS05475;product=DUF6694 family lipoprotein;protein_id=WP_001751928.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1131463 1131645 . + . ID=gene-CCO47_RS24065;Name=CCO47_RS24065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24065;pseudo=true NZ_CP075113.1 Protein Homology CDS 1131463 1131645 . + 0 ID=cds-CCO47_RS24065;Parent=gene-CCO47_RS24065;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012777362.1;locus_tag=CCO47_RS24065;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1131682 1132842 . + . ID=gene-CCO47_RS05480;Name=CCO47_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05480;old_locus_tag=CCO47_05480 NZ_CP075113.1 Protein Homology CDS 1131682 1132842 . + 0 ID=cds-WP_000133007.1;Parent=gene-CCO47_RS05480;Dbxref=GenBank:WP_000133007.1;Name=WP_000133007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000133007.1;locus_tag=CCO47_RS05480;product=DUF262 domain-containing protein;protein_id=WP_000133007.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1132847 1133626 . + . ID=gene-CCO47_RS05485;Name=CCO47_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05485;old_locus_tag=CCO47_05485 NZ_CP075113.1 Protein Homology CDS 1132847 1133626 . + 0 ID=cds-WP_000389024.1;Parent=gene-CCO47_RS05485;Dbxref=GenBank:WP_000389024.1;Name=WP_000389024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389025.1;locus_tag=CCO47_RS05485;product=MAE_28990/MAE_18760 family HEPN-like nuclease;protein_id=WP_000389024.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1133623 1134654 . - . ID=gene-CCO47_RS05490;Name=CCO47_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05490;old_locus_tag=CCO47_05490 NZ_CP075113.1 Protein Homology CDS 1133623 1134654 . - 0 ID=cds-WP_000520369.1;Parent=gene-CCO47_RS05490;Dbxref=GenBank:WP_000520369.1;Name=WP_000520369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000520369.1;locus_tag=CCO47_RS05490;product=phage portal protein;protein_id=WP_000520369.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1134654 1136420 . - . ID=gene-CCO47_RS05495;Name=CCO47_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05495;old_locus_tag=CCO47_05495 NZ_CP075113.1 Protein Homology CDS 1134654 1136420 . - 0 ID=cds-WP_001574814.1;Parent=gene-CCO47_RS05495;Dbxref=GenBank:WP_001574814.1;Name=WP_001574814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226020.1;locus_tag=CCO47_RS05495;product=terminase ATPase subunit family protein;protein_id=WP_001574814.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1136563 1137396 . + . ID=gene-CCO47_RS05500;Name=CCO47_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05500;old_locus_tag=CCO47_05500 NZ_CP075113.1 Protein Homology CDS 1136563 1137396 . + 0 ID=cds-WP_000216232.1;Parent=gene-CCO47_RS05500;Dbxref=GenBank:WP_000216232.1;Name=WP_000216232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226021.1;locus_tag=CCO47_RS05500;product=GPO family capsid scaffolding protein;protein_id=WP_000216232.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1137413 1138471 . + . ID=gene-CCO47_RS05505;Name=CCO47_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05505;old_locus_tag=CCO47_05505 NZ_CP075113.1 Protein Homology CDS 1137413 1138471 . + 0 ID=cds-WP_000742505.1;Parent=gene-CCO47_RS05505;Dbxref=GenBank:WP_000742505.1;Name=WP_000742505.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226022.1;locus_tag=CCO47_RS05505;product=phage major capsid protein%2C P2 family;protein_id=WP_000742505.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1138475 1139125 . + . ID=gene-CCO47_RS05510;Name=CCO47_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05510;old_locus_tag=CCO47_05510 NZ_CP075113.1 Protein Homology CDS 1138475 1139125 . + 0 ID=cds-WP_000059191.1;Parent=gene-CCO47_RS05510;Dbxref=GenBank:WP_000059191.1;Name=WP_000059191.1;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226023.1;locus_tag=CCO47_RS05510;product=phage terminase small subunit;protein_id=WP_000059191.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1139221 1139685 . + . ID=gene-CCO47_RS05515;Name=CCO47_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05515;old_locus_tag=CCO47_05515 NZ_CP075113.1 Protein Homology CDS 1139221 1139685 . + 0 ID=cds-WP_000673520.1;Parent=gene-CCO47_RS05515;Dbxref=GenBank:WP_000673520.1;Name=WP_000673520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226024.1;locus_tag=CCO47_RS05515;product=head completion/stabilization protein;protein_id=WP_000673520.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1139685 1139888 . + . ID=gene-CCO47_RS05520;Name=CCO47_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05520;old_locus_tag=CCO47_05520 NZ_CP075113.1 Protein Homology CDS 1139685 1139888 . + 0 ID=cds-WP_000868175.1;Parent=gene-CCO47_RS05520;Dbxref=GenBank:WP_000868175.1;Name=WP_000868175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461645.1;locus_tag=CCO47_RS05520;product=tail protein X;protein_id=WP_000868175.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1139892 1140107 . + . ID=gene-CCO47_RS05525;Name=CCO47_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05525;old_locus_tag=CCO47_05525 NZ_CP075113.1 Protein Homology CDS 1139892 1140107 . + 0 ID=cds-WP_000171568.1;Parent=gene-CCO47_RS05525;Dbxref=GenBank:WP_000171568.1;Name=WP_000171568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461644.1;locus_tag=CCO47_RS05525;product=HP1 family phage holin;protein_id=WP_000171568.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1140088 1140600 . + . ID=gene-CCO47_RS05530;Name=CCO47_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05530;old_locus_tag=CCO47_05530 NZ_CP075113.1 Protein Homology CDS 1140088 1140600 . + 0 ID=cds-WP_001069909.1;Parent=gene-CCO47_RS05530;Dbxref=GenBank:WP_001069909.1;Name=WP_001069909.1;Ontology_term=GO:0009253,GO:0016998,GO:0042742,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA,defense response to bacterium|0042742||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001069913.1;locus_tag=CCO47_RS05530;product=lysozyme;protein_id=WP_001069909.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1140602 1140979 . + . ID=gene-CCO47_RS05535;Name=CCO47_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05535;old_locus_tag=CCO47_05535 NZ_CP075113.1 Protein Homology CDS 1140602 1140979 . + 0 ID=cds-WP_000727849.1;Parent=gene-CCO47_RS05535;Dbxref=GenBank:WP_000727849.1;Name=WP_000727849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000730949.1;locus_tag=CCO47_RS05535;product=DNZ54_00345 family protein;protein_id=WP_000727849.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1140976 1141404 . + . ID=gene-CCO47_RS24070;Name=lysB;gbkey=Gene;gene=lysB;gene_biotype=protein_coding;locus_tag=CCO47_RS24070 NZ_CP075113.1 Protein Homology CDS 1140976 1141404 . + 0 ID=cds-WP_001574811.1;Parent=gene-CCO47_RS24070;Dbxref=GenBank:WP_001574811.1;Name=WP_001574811.1;Note=The gene for this Rz-like phage lysis system protein may overlap extensively with the gene for the other spanin subunit%2C the Rz1-like protein in the outer membrane.;gbkey=CDS;gene=lysB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461642.1;locus_tag=CCO47_RS24070;product=Rz-like lysis system protein LysB;protein_id=WP_001574811.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1141289 1141537 . + . ID=gene-CCO47_RS05540;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=CCO47_RS05540;old_locus_tag=CCO47_05540 NZ_CP075113.1 Protein Homology CDS 1141289 1141537 . + 0 ID=cds-WP_214292207.1;Parent=gene-CCO47_RS05540;Dbxref=GenBank:WP_214292207.1;Name=WP_214292207.1;Note=LysC is an Rz1-like component of a phage lytic system%2C substantially overlapping although not fully embedded in the gene for the Rz-like LysB component.;gbkey=CDS;gene=lysC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461641.1;locus_tag=CCO47_RS05540;product=Rz1-like lysis system protein LysC;protein_id=WP_214292207.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1141500 1141931 . + . ID=gene-CCO47_RS05545;Name=CCO47_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05545;old_locus_tag=CCO47_05545 NZ_CP075113.1 Protein Homology CDS 1141500 1141931 . + 0 ID=cds-WP_001039937.1;Parent=gene-CCO47_RS05545;Dbxref=GenBank:WP_001039937.1;Name=WP_001039937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461640.1;locus_tag=CCO47_RS05545;product=phage tail protein;protein_id=WP_001039937.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1141924 1142370 . + . ID=gene-CCO47_RS05550;Name=CCO47_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05550;old_locus_tag=CCO47_05550 NZ_CP075113.1 Protein Homology CDS 1141924 1142370 . + 0 ID=cds-WP_000829151.1;Parent=gene-CCO47_RS05550;Dbxref=GenBank:WP_000829151.1;Name=WP_000829151.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829125.1;locus_tag=CCO47_RS05550;product=phage virion morphogenesis protein;protein_id=WP_000829151.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1142397 1143263 . - . ID=gene-CCO47_RS05555;Name=CCO47_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05555;old_locus_tag=CCO47_05555 NZ_CP075113.1 Protein Homology CDS 1142397 1143263 . - 0 ID=cds-WP_000192047.1;Parent=gene-CCO47_RS05555;Dbxref=GenBank:WP_000192047.1;Name=WP_000192047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004150995.1;locus_tag=CCO47_RS05555;product=hypothetical protein;protein_id=WP_000192047.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1143359 1143937 . + . ID=gene-CCO47_RS05560;Name=CCO47_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05560;old_locus_tag=CCO47_05560 NZ_CP075113.1 Protein Homology CDS 1143359 1143937 . + 0 ID=cds-WP_000993756.1;Parent=gene-CCO47_RS05560;Dbxref=GenBank:WP_000993756.1;Name=WP_000993756.1;Ontology_term=GO:0098003,GO:0046872,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_function=metal ion binding|0046872||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461638.1;locus_tag=CCO47_RS05560;product=phage baseplate assembly protein V;protein_id=WP_000993756.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1143934 1144293 . + . ID=gene-CCO47_RS05565;Name=CCO47_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05565;old_locus_tag=CCO47_05565 NZ_CP075113.1 Protein Homology CDS 1143934 1144293 . + 0 ID=cds-WP_000177484.1;Parent=gene-CCO47_RS05565;Dbxref=GenBank:WP_000177484.1;Name=WP_000177484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461637.1;locus_tag=CCO47_RS05565;product=GPW/gp25 family protein;protein_id=WP_000177484.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1144280 1145188 . + . ID=gene-CCO47_RS05570;Name=CCO47_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05570;old_locus_tag=CCO47_05570 NZ_CP075113.1 Protein Homology CDS 1144280 1145188 . + 0 ID=cds-WP_000268273.1;Parent=gene-CCO47_RS05570;Dbxref=GenBank:WP_000268273.1;Name=WP_000268273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461636.1;locus_tag=CCO47_RS05570;product=baseplate assembly protein;protein_id=WP_000268273.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1145181 1145786 . + . ID=gene-CCO47_RS05575;Name=CCO47_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05575;old_locus_tag=CCO47_05575 NZ_CP075113.1 Protein Homology CDS 1145181 1145786 . + 0 ID=cds-WP_001086804.1;Parent=gene-CCO47_RS05575;Dbxref=GenBank:WP_001086804.1;Name=WP_001086804.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461635.1;locus_tag=CCO47_RS05575;product=phage tail protein I;protein_id=WP_001086804.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1145783 1147468 . + . ID=gene-CCO47_RS05580;Name=CCO47_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05580;old_locus_tag=CCO47_05580 NZ_CP075113.1 Protein Homology CDS 1145783 1147468 . + 0 ID=cds-WP_001274650.1;Parent=gene-CCO47_RS05580;Dbxref=GenBank:WP_001274650.1;Name=WP_001274650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461178.1;locus_tag=CCO47_RS05580;product=phage tail-collar fiber domain-containing protein;protein_id=WP_001274650.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1147471 1147998 . + . ID=gene-CCO47_RS05585;Name=CCO47_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05585;old_locus_tag=CCO47_05585 NZ_CP075113.1 Protein Homology CDS 1147471 1147998 . + 0 ID=cds-WP_000680167.1;Parent=gene-CCO47_RS05585;Dbxref=GenBank:WP_000680167.1;Name=WP_000680167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461177.1;locus_tag=CCO47_RS05585;product=tail fiber assembly protein;protein_id=WP_000680167.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1148129 1149301 . + . ID=gene-CCO47_RS05590;Name=CCO47_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05590;old_locus_tag=CCO47_05590 NZ_CP075113.1 Protein Homology CDS 1148129 1149301 . + 0 ID=cds-WP_000046103.1;Parent=gene-CCO47_RS05590;Dbxref=GenBank:WP_000046103.1;Name=WP_000046103.1;Ontology_term=GO:0099000,GO:0098027;gbkey=CDS;go_component=virus tail%2C sheath|0098027||IEA;go_process=symbiont genome ejection through host cell envelope%2C contractile tail mechanism|0099000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461629.1;locus_tag=CCO47_RS05590;product=phage tail sheath protein;protein_id=WP_000046103.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1149311 1149826 . + . ID=gene-CCO47_RS05595;Name=CCO47_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05595;old_locus_tag=CCO47_05595 NZ_CP075113.1 Protein Homology CDS 1149311 1149826 . + 0 ID=cds-WP_001207653.1;Parent=gene-CCO47_RS05595;Dbxref=GenBank:WP_001207653.1;Name=WP_001207653.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461628.1;locus_tag=CCO47_RS05595;product=phage major tail tube protein;protein_id=WP_001207653.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1149881 1150183 . + . ID=gene-CCO47_RS05600;Name=CCO47_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05600;old_locus_tag=CCO47_05600 NZ_CP075113.1 Protein Homology CDS 1149881 1150183 . + 0 ID=cds-WP_001280967.1;Parent=gene-CCO47_RS05600;Dbxref=GenBank:WP_001280967.1;Name=WP_001280967.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461627.1;locus_tag=CCO47_RS05600;product=phage tail assembly protein;protein_id=WP_001280967.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1150198 1150317 . + . ID=gene-CCO47_RS05605;Name=CCO47_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05605;old_locus_tag=CCO47_05605 NZ_CP075113.1 Protein Homology CDS 1150198 1150317 . + 0 ID=cds-WP_000763317.1;Parent=gene-CCO47_RS05605;Dbxref=GenBank:WP_000763317.1;Name=WP_000763317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461626.1;locus_tag=CCO47_RS05605;product=GpE family phage tail protein;protein_id=WP_000763317.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1150310 1153117 . + . ID=gene-CCO47_RS05610;Name=CCO47_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05610;old_locus_tag=CCO47_05610 NZ_CP075113.1 Protein Homology CDS 1150310 1153117 . + 0 ID=cds-WP_001282767.1;Parent=gene-CCO47_RS05610;Dbxref=GenBank:WP_001282767.1;Name=WP_001282767.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461625.1;locus_tag=CCO47_RS05610;product=phage tail tape measure protein;protein_id=WP_001282767.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1153114 1153599 . + . ID=gene-CCO47_RS05615;Name=CCO47_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05615;old_locus_tag=CCO47_05615 NZ_CP075113.1 Protein Homology CDS 1153114 1153599 . + 0 ID=cds-WP_000980409.1;Parent=gene-CCO47_RS05615;Dbxref=GenBank:WP_000980409.1;Name=WP_000980409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461624.1;locus_tag=CCO47_RS05615;product=phage tail protein;protein_id=WP_000980409.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1153596 1154696 . + . ID=gene-CCO47_RS05620;Name=CCO47_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05620;old_locus_tag=CCO47_05620 NZ_CP075113.1 Protein Homology CDS 1153596 1154696 . + 0 ID=cds-WP_001102266.1;Parent=gene-CCO47_RS05620;Dbxref=GenBank:WP_001102266.1;Name=WP_001102266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461623.1;locus_tag=CCO47_RS05620;product=phage late control D family protein;protein_id=WP_001102266.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1154765 1154983 . + . ID=gene-CCO47_RS05625;Name=CCO47_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05625;old_locus_tag=CCO47_05625 NZ_CP075113.1 Protein Homology CDS 1154765 1154983 . + 0 ID=cds-WP_000980498.1;Parent=gene-CCO47_RS05625;Dbxref=GenBank:WP_000980498.1;Name=WP_000980498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461622.1;locus_tag=CCO47_RS05625;product=ogr/Delta-like zinc finger family protein;protein_id=WP_000980498.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1155101 1155463 . - . ID=gene-CCO47_RS05630;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=CCO47_RS05630;old_locus_tag=CCO47_05630 NZ_CP075113.1 cmsearch tmRNA 1155101 1155463 . - . ID=rna-CCO47_RS05630;Parent=gene-CCO47_RS05630;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS05630;product=transfer-messenger RNA NZ_CP075113.1 cmsearch exon 1155101 1155463 . - . ID=exon-CCO47_RS05630-1;Parent=rna-CCO47_RS05630;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS05630;product=transfer-messenger RNA NZ_CP075113.1 RefSeq gene 1155535 1156698 . - . ID=gene-CCO47_RS05635;Name=CCO47_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05635;old_locus_tag=CCO47_05635 NZ_CP075113.1 Protein Homology CDS 1155535 1156698 . - 0 ID=cds-WP_012543392.1;Parent=gene-CCO47_RS05635;Dbxref=GenBank:WP_012543392.1;Name=WP_012543392.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461621.1;locus_tag=CCO47_RS05635;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_012543392.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1156706 1158881 . - . ID=gene-CCO47_RS05640;Name=CCO47_RS05640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS05640;old_locus_tag=CCO47_05640;pseudo=true NZ_CP075113.1 Protein Homology CDS 1156706 1158881 . - 0 ID=cds-CCO47_RS05640;Parent=gene-CCO47_RS05640;Note=frameshifted;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=CCO47_RS05640;product=type I secretion system permease/ATPase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1158878 1160287 . - . ID=gene-CCO47_RS05645;Name=CCO47_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05645;old_locus_tag=CCO47_05645 NZ_CP075113.1 Protein Homology CDS 1158878 1160287 . - 0 ID=cds-WP_000533843.1;Parent=gene-CCO47_RS05645;Dbxref=GenBank:WP_000533843.1;Name=WP_000533843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461619.1;locus_tag=CCO47_RS05645;product=TolC family outer membrane protein;protein_id=WP_000533843.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1160352 1171571 . - . ID=gene-CCO47_RS05650;Name=bapA;gbkey=Gene;gene=bapA;gene_biotype=protein_coding;locus_tag=CCO47_RS05650;old_locus_tag=CCO47_05650 NZ_CP075113.1 Protein Homology CDS 1160352 1171571 . - 0 ID=cds-WP_001237698.1;Parent=gene-CCO47_RS05650;Dbxref=GenBank:WP_001237698.1;Name=WP_001237698.1;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237670.1;locus_tag=CCO47_RS05650;product=biofilm-associated protein BapA;protein_id=WP_001237698.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1172186 1172668 . - . ID=gene-CCO47_RS05655;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=CCO47_RS05655;old_locus_tag=CCO47_05655 NZ_CP075113.1 Protein Homology CDS 1172186 1172668 . - 0 ID=cds-WP_001518569.1;Parent=gene-CCO47_RS05655;Dbxref=GenBank:WP_001518569.1;Name=WP_001518569.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461618.1;locus_tag=CCO47_RS05655;product=SsrA-binding protein SmpB;protein_id=WP_001518569.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1172857 1173294 . + . ID=gene-CCO47_RS05660;Name=CCO47_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05660;old_locus_tag=CCO47_05660 NZ_CP075113.1 Protein Homology CDS 1172857 1173294 . + 0 ID=cds-WP_001537508.1;Parent=gene-CCO47_RS05660;Dbxref=GenBank:WP_001537508.1;Name=WP_001537508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543334.1;locus_tag=CCO47_RS05660;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_001537508.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1173284 1173574 . + . ID=gene-CCO47_RS05665;Name=CCO47_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05665;old_locus_tag=CCO47_05665 NZ_CP075113.1 Protein Homology CDS 1173284 1173574 . + 0 ID=cds-WP_001112990.1;Parent=gene-CCO47_RS05665;Dbxref=GenBank:WP_001112990.1;Name=WP_001112990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=CCO47_RS05665;product=RnfH family protein;protein_id=WP_001112990.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1173740 1174078 . - . ID=gene-CCO47_RS05670;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=CCO47_RS05670;old_locus_tag=CCO47_05670 NZ_CP075113.1 Protein Homology CDS 1173740 1174078 . - 0 ID=cds-WP_001203445.1;Parent=gene-CCO47_RS05670;Dbxref=GenBank:WP_001203445.1;Name=WP_001203445.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461615.1;locus_tag=CCO47_RS05670;product=outer membrane protein assembly factor BamE;protein_id=WP_001203445.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1174227 1175888 . - . ID=gene-CCO47_RS05675;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=CCO47_RS05675;old_locus_tag=CCO47_05675 NZ_CP075113.1 Protein Homology CDS 1174227 1175888 . - 0 ID=cds-WP_000880975.1;Parent=gene-CCO47_RS05675;Dbxref=GenBank:WP_000880975.1;Name=WP_000880975.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=CCO47_RS05675;product=DNA repair protein RecN;protein_id=WP_000880975.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1175974 1176852 . - . ID=gene-CCO47_RS05680;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=CCO47_RS05680;old_locus_tag=CCO47_05680 NZ_CP075113.1 Protein Homology CDS 1175974 1176852 . - 0 ID=cds-WP_001059151.1;Parent=gene-CCO47_RS05680;Dbxref=GenBank:WP_001059151.1;Name=WP_001059151.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=CCO47_RS05680;product=NAD(+) kinase;protein_id=WP_001059151.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1176976 1177566 . + . ID=gene-CCO47_RS05685;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=CCO47_RS05685;old_locus_tag=CCO47_05685 NZ_CP075113.1 Protein Homology CDS 1176976 1177566 . + 0 ID=cds-WP_001518875.1;Parent=gene-CCO47_RS05685;Dbxref=GenBank:WP_001518875.1;Name=WP_001518875.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461611.1;locus_tag=CCO47_RS05685;product=nucleotide exchange factor GrpE;protein_id=WP_001518875.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1177601 1178206 . - . ID=gene-CCO47_RS05690;Name=CCO47_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05690;old_locus_tag=CCO47_05690 NZ_CP075113.1 Protein Homology CDS 1177601 1178206 . - 0 ID=cds-WP_001287926.1;Parent=gene-CCO47_RS05690;Dbxref=GenBank:WP_001287926.1;Name=WP_001287926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461610.1;locus_tag=CCO47_RS05690;product=DUF6630 family protein;protein_id=WP_001287926.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1178327 1179613 . - . ID=gene-CCO47_RS05695;Name=CCO47_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05695;old_locus_tag=CCO47_05695 NZ_CP075113.1 Protein Homology CDS 1178327 1179613 . - 0 ID=cds-WP_127172650.1;Parent=gene-CCO47_RS05695;Dbxref=GenBank:WP_127172650.1;Name=WP_127172650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=CCO47_RS05695;product=HlyC/CorC family transporter;protein_id=WP_127172650.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1179633 1180424 . - . ID=gene-CCO47_RS05700;Name=CCO47_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05700;old_locus_tag=CCO47_05700 NZ_CP075113.1 Protein Homology CDS 1179633 1180424 . - 0 ID=cds-WP_001537507.1;Parent=gene-CCO47_RS05700;Dbxref=GenBank:WP_001537507.1;Name=WP_001537507.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461608.1;locus_tag=CCO47_RS05700;product=cytochrome C assembly family protein;protein_id=WP_001537507.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1180590 1181951 . + . ID=gene-CCO47_RS05705;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=CCO47_RS05705;old_locus_tag=CCO47_05705 NZ_CP075113.1 Protein Homology CDS 1180590 1181951 . + 0 ID=cds-WP_000460052.1;Parent=gene-CCO47_RS05705;Dbxref=GenBank:WP_000460052.1;Name=WP_000460052.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=CCO47_RS05705;product=signal recognition particle protein;protein_id=WP_000460052.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1182204 1182452 . + . ID=gene-CCO47_RS05710;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=CCO47_RS05710;old_locus_tag=CCO47_05710 NZ_CP075113.1 Protein Homology CDS 1182204 1182452 . + 0 ID=cds-WP_000256453.1;Parent=gene-CCO47_RS05710;Dbxref=GenBank:WP_000256453.1;Name=WP_000256453.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=CCO47_RS05710;product=30S ribosomal protein S16;protein_id=WP_000256453.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1182471 1183019 . + . ID=gene-CCO47_RS05715;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=CCO47_RS05715;old_locus_tag=CCO47_05715 NZ_CP075113.1 Protein Homology CDS 1182471 1183019 . + 0 ID=cds-WP_000043266.1;Parent=gene-CCO47_RS05715;Dbxref=GenBank:WP_000043266.1;Name=WP_000043266.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=CCO47_RS05715;product=ribosome maturation factor RimM;protein_id=WP_000043266.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1183064 1183831 . + . ID=gene-CCO47_RS05720;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=CCO47_RS05720;old_locus_tag=CCO47_05720 NZ_CP075113.1 Protein Homology CDS 1183064 1183831 . + 0 ID=cds-WP_000469804.1;Parent=gene-CCO47_RS05720;Dbxref=GenBank:WP_000469804.1;Name=WP_000469804.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=CCO47_RS05720;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000469804.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1183872 1184219 . + . ID=gene-CCO47_RS05725;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=CCO47_RS05725;old_locus_tag=CCO47_05725 NZ_CP075113.1 Protein Homology CDS 1183872 1184219 . + 0 ID=cds-WP_000065257.1;Parent=gene-CCO47_RS05725;Dbxref=GenBank:WP_000065257.1;Name=WP_000065257.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=CCO47_RS05725;product=50S ribosomal protein L19;protein_id=WP_000065257.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1184377 1185597 . - . ID=gene-CCO47_RS05730;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;gene_synonym=yfiN;locus_tag=CCO47_RS05730;old_locus_tag=CCO47_05730 NZ_CP075113.1 Protein Homology CDS 1184377 1185597 . - 0 ID=cds-WP_001030986.1;Parent=gene-CCO47_RS05730;Dbxref=GenBank:WP_001030986.1;Name=WP_001030986.1;Ontology_term=GO:0007165,GO:0052621,GO:0005886;gbkey=CDS;gene=dgcN;go_component=plasma membrane|0005886||IEA;go_function=diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=CCO47_RS05730;product=diguanylate cyclase DgcN/YfiN;protein_id=WP_001030986.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1185590 1186108 . - . ID=gene-CCO47_RS05735;Name=yfiR;gbkey=Gene;gene=yfiR;gene_biotype=protein_coding;locus_tag=CCO47_RS05735;old_locus_tag=CCO47_05735 NZ_CP075113.1 Protein Homology CDS 1185590 1186108 . - 0 ID=cds-WP_001212379.1;Parent=gene-CCO47_RS05735;Dbxref=GenBank:WP_001212379.1;Name=WP_001212379.1;Ontology_term=GO:0007165,GO:0030288;gbkey=CDS;gene=yfiR;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461601.1;locus_tag=CCO47_RS05735;product=regulatory sequestration protein YfiR;protein_id=WP_001212379.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1186548 1187618 . + . ID=gene-CCO47_RS05740;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=CCO47_RS05740;old_locus_tag=CCO47_05740 NZ_CP075113.1 Protein Homology CDS 1186548 1187618 . + 0 ID=cds-WP_001168062.1;Parent=gene-CCO47_RS05740;Dbxref=GenBank:WP_001168062.1;Name=WP_001168062.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461600.1;locus_tag=CCO47_RS05740;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_001168062.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1187628 1188749 . + . ID=gene-CCO47_RS05745;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=CCO47_RS05745;old_locus_tag=CCO47_05745 NZ_CP075113.1 Protein Homology CDS 1187628 1188749 . + 0 ID=cds-WP_000225188.1;Parent=gene-CCO47_RS05745;Dbxref=GenBank:WP_000225188.1;Name=WP_000225188.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=L-tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461599.1;locus_tag=CCO47_RS05745;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_000225188.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1188807 1189715 . + . ID=gene-CCO47_RS05750;Name=CCO47_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05750;old_locus_tag=CCO47_05750 NZ_CP075113.1 Protein Homology CDS 1188807 1189715 . + 0 ID=cds-WP_000210984.1;Parent=gene-CCO47_RS05750;Dbxref=GenBank:WP_000210984.1;Name=WP_000210984.1;Ontology_term=GO:0005509,GO:0016787,GO:0046872;gbkey=CDS;go_function=calcium ion binding|0005509||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461598.1;locus_tag=CCO47_RS05750;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_000210984.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1189676 1190836 . - . ID=gene-CCO47_RS05755;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=CCO47_RS05755;old_locus_tag=CCO47_05755 NZ_CP075113.1 Protein Homology CDS 1189676 1190836 . - 0 ID=cds-WP_000200076.1;Parent=gene-CCO47_RS05755;Dbxref=GenBank:WP_000200076.1;Name=WP_000200076.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461597.1;locus_tag=CCO47_RS05755;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_000200076.1;transl_table=11 NZ_CP075113.1 cmsearch sequence_feature 1190859 1190984 . - . ID=id-NZ_CP075113.1:1190859..1190984;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_CP075113.1 RefSeq gene 1190936 1190983 . - . ID=gene-CCO47_RS05760;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=CCO47_RS05760;old_locus_tag=CCO47_05760 NZ_CP075113.1 Protein Homology CDS 1190936 1190983 . - 0 ID=cds-WP_010989056.1;Parent=gene-CCO47_RS05760;Dbxref=GenBank:WP_010989056.1;Name=WP_010989056.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449055.1;locus_tag=CCO47_RS05760;product=pheA operon leader peptide PheL;protein_id=WP_010989056.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1191087 1191425 . - . ID=gene-CCO47_RS05765;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=CCO47_RS05765;old_locus_tag=CCO47_05765 NZ_CP075113.1 Protein Homology CDS 1191087 1191425 . - 0 ID=cds-WP_000178449.1;Parent=gene-CCO47_RS05765;Dbxref=GenBank:WP_000178449.1;Name=WP_000178449.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461595.1;locus_tag=CCO47_RS05765;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178449.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1191697 1192434 . - . ID=gene-CCO47_RS05770;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=CCO47_RS05770;old_locus_tag=CCO47_05770 NZ_CP075113.1 Protein Homology CDS 1191697 1192434 . - 0 ID=cds-WP_000197660.1;Parent=gene-CCO47_RS05770;Dbxref=GenBank:WP_000197660.1;Name=WP_000197660.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=CCO47_RS05770;product=outer membrane protein assembly factor BamD;protein_id=WP_000197660.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1192566 1193546 . + . ID=gene-CCO47_RS05775;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=CCO47_RS05775;old_locus_tag=CCO47_05775 NZ_CP075113.1 Protein Homology CDS 1192566 1193546 . + 0 ID=cds-WP_000079130.1;Parent=gene-CCO47_RS05775;Dbxref=GenBank:WP_000079130.1;Name=WP_000079130.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=CCO47_RS05775;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079130.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1193543 1194274 . + . ID=gene-CCO47_RS05780;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=CCO47_RS05780;old_locus_tag=CCO47_05780 NZ_CP075113.1 Protein Homology CDS 1193543 1194274 . + 0 ID=cds-WP_000992639.1;Parent=gene-CCO47_RS05780;Dbxref=GenBank:WP_000992639.1;Name=WP_000992639.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=CCO47_RS05780;product=purine nucleoside phosphorylase YfiH;protein_id=WP_000992639.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1194404 1196977 . + . ID=gene-CCO47_RS05785;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=CCO47_RS05785;old_locus_tag=CCO47_05785 NZ_CP075113.1 Protein Homology CDS 1194404 1196977 . + 0 ID=cds-WP_001235092.1;Parent=gene-CCO47_RS05785;Dbxref=GenBank:WP_001235092.1;Name=WP_001235092.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=CCO47_RS05785;product=ATP-dependent chaperone ClpB;protein_id=WP_001235092.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1197433 1198974 . + . ID=gene-CCO47_RS05790;Name=CCO47_RS05790;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO47_RS05790;old_locus_tag=CCO47_05790 NZ_CP075113.1 cmsearch rRNA 1197433 1198974 . + . ID=rna-CCO47_RS05790;Parent=gene-CCO47_RS05790;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS05790;product=16S ribosomal RNA NZ_CP075113.1 cmsearch exon 1197433 1198974 . + . ID=exon-CCO47_RS05790-1;Parent=rna-CCO47_RS05790;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS05790;product=16S ribosomal RNA NZ_CP075113.1 RefSeq gene 1199060 1199135 . + . ID=gene-CCO47_RS05795;Name=CCO47_RS05795;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS05795;old_locus_tag=CCO47_05795 NZ_CP075113.1 tRNAscan-SE tRNA 1199060 1199135 . + . ID=rna-CCO47_RS05795;Parent=gene-CCO47_RS05795;anticodon=(pos:1199094..1199096);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS05795;product=tRNA-Glu NZ_CP075113.1 tRNAscan-SE exon 1199060 1199135 . + . ID=exon-CCO47_RS05795-1;Parent=rna-CCO47_RS05795;anticodon=(pos:1199094..1199096);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS05795;product=tRNA-Glu NZ_CP075113.1 RefSeq gene 1199329 1202236 . + . ID=gene-CCO47_RS05800;Name=CCO47_RS05800;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO47_RS05800;old_locus_tag=CCO47_05800 NZ_CP075113.1 cmsearch rRNA 1199329 1202236 . + . ID=rna-CCO47_RS05800;Parent=gene-CCO47_RS05800;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS05800;product=23S ribosomal RNA NZ_CP075113.1 cmsearch exon 1199329 1202236 . + . ID=exon-CCO47_RS05800-1;Parent=rna-CCO47_RS05800;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS05800;product=23S ribosomal RNA NZ_CP075113.1 RefSeq gene 1202433 1202548 . + . ID=gene-CCO47_RS05805;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO47_RS05805;old_locus_tag=CCO47_05805 NZ_CP075113.1 cmsearch rRNA 1202433 1202548 . + . ID=rna-CCO47_RS05805;Parent=gene-CCO47_RS05805;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS05805;product=5S ribosomal RNA NZ_CP075113.1 cmsearch exon 1202433 1202548 . + . ID=exon-CCO47_RS05805-1;Parent=rna-CCO47_RS05805;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS05805;product=5S ribosomal RNA NZ_CP075113.1 RefSeq gene 1202757 1203212 . + . ID=gene-CCO47_RS05810;Name=CCO47_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05810;old_locus_tag=CCO47_05810 NZ_CP075113.1 Protein Homology CDS 1202757 1203212 . + 0 ID=cds-WP_000985653.1;Parent=gene-CCO47_RS05810;Dbxref=GenBank:WP_000985653.1;Name=WP_000985653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=CCO47_RS05810;product=DUF4385 domain-containing protein;protein_id=WP_000985653.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1203316 1204617 . + . ID=gene-CCO47_RS05815;Name=CCO47_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05815;old_locus_tag=CCO47_05815 NZ_CP075113.1 Protein Homology CDS 1203316 1204617 . + 0 ID=cds-WP_000807815.1;Parent=gene-CCO47_RS05815;Dbxref=GenBank:WP_000807815.1;Name=WP_000807815.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461589.1;locus_tag=CCO47_RS05815;product=MFS transporter;protein_id=WP_000807815.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1204614 1204937 . - . ID=gene-CCO47_RS05820;Name=CCO47_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05820;old_locus_tag=CCO47_05820 NZ_CP075113.1 Protein Homology CDS 1204614 1204937 . - 0 ID=cds-WP_001264467.1;Parent=gene-CCO47_RS05820;Dbxref=GenBank:WP_001264467.1;Name=WP_001264467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461588.1;locus_tag=CCO47_RS05820;product=YfiM family lipoprotein;protein_id=WP_001264467.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1204982 1206337 . - . ID=gene-CCO47_RS05825;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=CCO47_RS05825;old_locus_tag=CCO47_05825 NZ_CP075113.1 Protein Homology CDS 1204982 1206337 . - 0 ID=cds-WP_000949286.1;Parent=gene-CCO47_RS05825;Dbxref=GenBank:WP_000949286.1;Name=WP_000949286.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=CCO47_RS05825;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949286.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1206452 1209112 . - . ID=gene-CCO47_RS05835;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=CCO47_RS05835;old_locus_tag=CCO47_05835 NZ_CP075113.1 Protein Homology CDS 1206452 1209112 . - 0 ID=cds-WP_000082638.1;Parent=gene-CCO47_RS05835;Dbxref=GenBank:WP_000082638.1;Name=WP_000082638.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=CCO47_RS05835;product=protein lysine acetyltransferase;protein_id=WP_000082638.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1209166 1209846 . - . ID=gene-CCO47_RS05840;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=CCO47_RS05840;old_locus_tag=CCO47_05840 NZ_CP075113.1 Protein Homology CDS 1209166 1209846 . - 0 ID=cds-WP_000609323.1;Parent=gene-CCO47_RS05840;Dbxref=GenBank:WP_000609323.1;Name=WP_000609323.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461585.1;locus_tag=CCO47_RS05840;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_000609323.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1209919 1210338 . - . ID=gene-CCO47_RS05845;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=CCO47_RS05845;old_locus_tag=CCO47_05845 NZ_CP075113.1 Protein Homology CDS 1209919 1210338 . - 0 ID=cds-WP_001098732.1;Parent=gene-CCO47_RS05845;Dbxref=GenBank:WP_001098732.1;Name=WP_001098732.1;Ontology_term=GO:0045454,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=CCO47_RS05845;product=thioredoxin TrxC;protein_id=WP_001098732.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1210542 1211579 . + . ID=gene-CCO47_RS05850;Name=CCO47_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05850;old_locus_tag=CCO47_05850 NZ_CP075113.1 Protein Homology CDS 1210542 1211579 . + 0 ID=cds-WP_000997368.1;Parent=gene-CCO47_RS05850;Dbxref=GenBank:WP_000997368.1;Name=WP_000997368.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461583.1;locus_tag=CCO47_RS05850;product=tRNA/rRNA methyltransferase;protein_id=WP_000997368.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1211695 1212384 . - . ID=gene-CCO47_RS05855;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=CCO47_RS05855;old_locus_tag=CCO47_05855 NZ_CP075113.1 Protein Homology CDS 1211695 1212384 . - 0 ID=cds-WP_000179978.1;Parent=gene-CCO47_RS05855;Dbxref=GenBank:WP_000179978.1;Name=WP_000179978.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461582.1;locus_tag=CCO47_RS05855;product=uracil-DNA glycosylase;protein_id=WP_000179978.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1212703 1213086 . + . ID=gene-CCO47_RS05860;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=CCO47_RS05860;old_locus_tag=CCO47_05860 NZ_CP075113.1 Protein Homology CDS 1212703 1213086 . + 0 ID=cds-WP_000627809.1;Parent=gene-CCO47_RS05860;Dbxref=GenBank:WP_000627809.1;Name=WP_000627809.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=CCO47_RS05860;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627809.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1213148 1213735 . - . ID=gene-CCO47_RS05865;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=CCO47_RS05865;old_locus_tag=CCO47_05865 NZ_CP075113.1 Protein Homology CDS 1213148 1213735 . - 0 ID=cds-WP_000188415.1;Parent=gene-CCO47_RS05865;Dbxref=GenBank:WP_000188415.1;Name=WP_000188415.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461580.1;locus_tag=CCO47_RS05865;product=cysteine/O-acetylserine transporter;protein_id=WP_000188415.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1213838 1214737 . + . ID=gene-CCO47_RS05870;Name=CCO47_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05870;old_locus_tag=CCO47_05870 NZ_CP075113.1 Protein Homology CDS 1213838 1214737 . + 0 ID=cds-WP_001675461.1;Parent=gene-CCO47_RS05870;Dbxref=GenBank:WP_001675461.1;Name=WP_001675461.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=CCO47_RS05870;product=LysR family transcriptional regulator;protein_id=WP_001675461.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1214755 1216089 . - . ID=gene-CCO47_RS05875;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=CCO47_RS05875;old_locus_tag=CCO47_05875 NZ_CP075113.1 Protein Homology CDS 1214755 1216089 . - 0 ID=cds-WP_000219174.1;Parent=gene-CCO47_RS05875;Dbxref=GenBank:WP_000219174.1;Name=WP_000219174.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461578.1;locus_tag=CCO47_RS05875;product=ATP-dependent RNA helicase SrmB;protein_id=WP_000219174.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1216219 1216956 . + . ID=gene-CCO47_RS05880;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=CCO47_RS05880;old_locus_tag=CCO47_05880 NZ_CP075113.1 Protein Homology CDS 1216219 1216956 . + 0 ID=cds-WP_000083339.1;Parent=gene-CCO47_RS05880;Dbxref=GenBank:WP_000083339.1;Name=WP_000083339.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=CCO47_RS05880;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_000083339.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1216941 1218563 . - . ID=gene-CCO47_RS05885;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=CCO47_RS05885;old_locus_tag=CCO47_05885 NZ_CP075113.1 Protein Homology CDS 1216941 1218563 . - 0 ID=cds-WP_000989179.1;Parent=gene-CCO47_RS05885;Dbxref=GenBank:WP_000989179.1;Name=WP_000989179.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461576.1;locus_tag=CCO47_RS05885;product=L-aspartate oxidase;protein_id=WP_000989179.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1218827 1218991 . + . ID=gene-CCO47_RS05890;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=CCO47_RS05890;old_locus_tag=CCO47_05890 NZ_CP075113.1 Protein Homology CDS 1218827 1218991 . + 0 ID=cds-WP_014344135.1;Parent=gene-CCO47_RS05890;Dbxref=GenBank:WP_014344135.1;Name=WP_014344135.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344135.1;locus_tag=CCO47_RS05890;product=rpoE leader peptide RseD;protein_id=WP_014344135.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1218988 1219563 . + . ID=gene-CCO47_RS05895;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=CCO47_RS05895;old_locus_tag=CCO47_05895 NZ_CP075113.1 Protein Homology CDS 1218988 1219563 . + 0 ID=cds-WP_000003307.1;Parent=gene-CCO47_RS05895;Dbxref=GenBank:WP_000003307.1;Name=WP_000003307.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=CCO47_RS05895;product=RNA polymerase sigma factor RpoE;protein_id=WP_000003307.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1219595 1220245 . + . ID=gene-CCO47_RS05900;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=CCO47_RS05900;old_locus_tag=CCO47_05900 NZ_CP075113.1 Protein Homology CDS 1219595 1220245 . + 0 ID=cds-WP_001168374.1;Parent=gene-CCO47_RS05900;Dbxref=GenBank:WP_001168374.1;Name=WP_001168374.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=CCO47_RS05900;product=anti-sigma-E factor RseA;protein_id=WP_001168374.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1220245 1221201 . + . ID=gene-CCO47_RS05905;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=CCO47_RS05905;old_locus_tag=CCO47_05905 NZ_CP075113.1 Protein Homology CDS 1220245 1221201 . + 0 ID=cds-WP_000812018.1;Parent=gene-CCO47_RS05905;Dbxref=GenBank:WP_000812018.1;Name=WP_000812018.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461573.1;locus_tag=CCO47_RS05905;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812018.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1221198 1221677 . + . ID=gene-CCO47_RS05910;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=CCO47_RS05910;old_locus_tag=CCO47_05910 NZ_CP075113.1 Protein Homology CDS 1221198 1221677 . + 0 ID=cds-WP_000589087.1;Parent=gene-CCO47_RS05910;Dbxref=GenBank:WP_000589087.1;Name=WP_000589087.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461572.1;locus_tag=CCO47_RS05910;product=SoxR-reducing system protein RseC;protein_id=WP_000589087.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1221929 1223728 . + . ID=gene-CCO47_RS05915;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=CCO47_RS05915;old_locus_tag=CCO47_05915 NZ_CP075113.1 Protein Homology CDS 1221929 1223728 . + 0 ID=cds-WP_000790154.1;Parent=gene-CCO47_RS05915;Dbxref=GenBank:WP_000790154.1;Name=WP_000790154.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461518.1;locus_tag=CCO47_RS05915;product=translation elongation factor 4;protein_id=WP_000790154.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1223745 1224719 . + . ID=gene-CCO47_RS05920;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CCO47_RS05920;old_locus_tag=CCO47_05920 NZ_CP075113.1 Protein Homology CDS 1223745 1224719 . + 0 ID=cds-WP_000002559.1;Parent=gene-CCO47_RS05920;Dbxref=GenBank:WP_000002559.1;Name=WP_000002559.1;Ontology_term=GO:0051604,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461517.1;locus_tag=CCO47_RS05920;product=signal peptidase I;protein_id=WP_000002559.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1224993 1225673 . + . ID=gene-CCO47_RS05925;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=CCO47_RS05925;old_locus_tag=CCO47_05925 NZ_CP075113.1 Protein Homology CDS 1224993 1225673 . + 0 ID=cds-WP_001068341.1;Parent=gene-CCO47_RS05925;Dbxref=GenBank:WP_001068341.1;Name=WP_001068341.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=CCO47_RS05925;product=ribonuclease III;protein_id=WP_001068341.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1225670 1226575 . + . ID=gene-CCO47_RS05930;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=CCO47_RS05930;old_locus_tag=CCO47_05930 NZ_CP075113.1 Protein Homology CDS 1225670 1226575 . + 0 ID=cds-WP_000102230.1;Parent=gene-CCO47_RS05930;Dbxref=GenBank:WP_000102230.1;Name=WP_000102230.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461515.1;locus_tag=CCO47_RS05930;product=GTPase Era;protein_id=WP_000102230.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1226587 1227315 . + . ID=gene-CCO47_RS05935;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=CCO47_RS05935;old_locus_tag=CCO47_05935 NZ_CP075113.1 Protein Homology CDS 1226587 1227315 . + 0 ID=cds-WP_000399387.1;Parent=gene-CCO47_RS05935;Dbxref=GenBank:WP_000399387.1;Name=WP_000399387.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461514.1;locus_tag=CCO47_RS05935;product=DNA repair protein RecO;protein_id=WP_000399387.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1227327 1228058 . + . ID=gene-CCO47_RS05940;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=CCO47_RS05940;old_locus_tag=CCO47_05940 NZ_CP075113.1 Protein Homology CDS 1227327 1228058 . + 0 ID=cds-WP_000818972.1;Parent=gene-CCO47_RS05940;Dbxref=GenBank:WP_000818972.1;Name=WP_000818972.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461513.1;locus_tag=CCO47_RS05940;product=pyridoxine 5'-phosphate synthase;protein_id=WP_000818972.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1228058 1228438 . + . ID=gene-CCO47_RS05945;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=CCO47_RS05945;old_locus_tag=CCO47_05945 NZ_CP075113.1 Protein Homology CDS 1228058 1228438 . + 0 ID=cds-WP_000986043.1;Parent=gene-CCO47_RS05945;Dbxref=GenBank:WP_000986043.1;Name=WP_000986043.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461512.1;locus_tag=CCO47_RS05945;product=holo-ACP synthase;protein_id=WP_000986043.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1228550 1228810 . - . ID=gene-CCO47_RS05950;Name=CCO47_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05950;old_locus_tag=CCO47_05950 NZ_CP075113.1 Protein Homology CDS 1228550 1228810 . - 0 ID=cds-WP_001196291.1;Parent=gene-CCO47_RS05950;Dbxref=GenBank:WP_001196291.1;Name=WP_001196291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461511.1;locus_tag=CCO47_RS05950;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_001196291.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1228848 1229774 . - . ID=gene-CCO47_RS05955;Name=CCO47_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05955;old_locus_tag=CCO47_05955 NZ_CP075113.1 Protein Homology CDS 1228848 1229774 . - 0 ID=cds-WP_001022463.1;Parent=gene-CCO47_RS05955;Dbxref=GenBank:WP_001022463.1;Name=WP_001022463.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461510.1;locus_tag=CCO47_RS05955;product=LysR family transcriptional regulator;protein_id=WP_001022463.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1229890 1231086 . + . ID=gene-CCO47_RS05960;Name=CCO47_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05960;old_locus_tag=CCO47_05960 NZ_CP075113.1 Protein Homology CDS 1229890 1231086 . + 0 ID=cds-WP_001276364.1;Parent=gene-CCO47_RS05960;Dbxref=GenBank:WP_001276364.1;Name=WP_001276364.1;Ontology_term=GO:0015129;gbkey=CDS;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=CCO47_RS05960;product=L-lactate MFS transporter;protein_id=WP_001276364.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1231108 1232025 . + . ID=gene-CCO47_RS05965;Name=CCO47_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05965;old_locus_tag=CCO47_05965 NZ_CP075113.1 Protein Homology CDS 1231108 1232025 . + 0 ID=cds-WP_000684029.1;Parent=gene-CCO47_RS05965;Dbxref=GenBank:WP_000684029.1;Name=WP_000684029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461508.1;locus_tag=CCO47_RS05965;product=oxidoreductase;protein_id=WP_000684029.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1232064 1232912 . - . ID=gene-CCO47_RS05970;Name=CCO47_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05970;old_locus_tag=CCO47_05970 NZ_CP075113.1 Protein Homology CDS 1232064 1232912 . - 0 ID=cds-WP_000995694.1;Parent=gene-CCO47_RS05970;Dbxref=GenBank:WP_000995694.1;Name=WP_000995694.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=CCO47_RS05970;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000995694.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1233028 1233921 . + . ID=gene-CCO47_RS05975;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=CCO47_RS05975;old_locus_tag=CCO47_05975 NZ_CP075113.1 Protein Homology CDS 1233028 1233921 . + 0 ID=cds-WP_001048537.1;Parent=gene-CCO47_RS05975;Dbxref=GenBank:WP_001048537.1;Name=WP_001048537.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461506.1;locus_tag=CCO47_RS05975;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_001048537.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1233932 1235293 . + . ID=gene-CCO47_RS05980;Name=CCO47_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS05980;old_locus_tag=CCO47_05980 NZ_CP075113.1 Protein Homology CDS 1233932 1235293 . + 0 ID=cds-WP_000361647.1;Parent=gene-CCO47_RS05980;Dbxref=GenBank:WP_000361647.1;Name=WP_000361647.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=CCO47_RS05980;product=PTS transporter subunit EIIC;protein_id=WP_000361647.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1235297 1235932 . + . ID=gene-CCO47_RS05985;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=CCO47_RS05985;old_locus_tag=CCO47_05985 NZ_CP075113.1 Protein Homology CDS 1235297 1235932 . + 0 ID=cds-WP_000253558.1;Parent=gene-CCO47_RS05985;Dbxref=GenBank:WP_000253558.1;Name=WP_000253558.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=CCO47_RS05985;product=phosphatidylglycerophosphatase C;protein_id=WP_000253558.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1235957 1236508 . + . ID=gene-CCO47_RS05990;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=CCO47_RS05990;old_locus_tag=CCO47_05990 NZ_CP075113.1 Protein Homology CDS 1235957 1236508 . + 0 ID=cds-WP_001134563.1;Parent=gene-CCO47_RS05990;Dbxref=GenBank:WP_001134563.1;Name=WP_001134563.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461503.1;locus_tag=CCO47_RS05990;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_001134563.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1236559 1238103 . - . ID=gene-CCO47_RS05995;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=CCO47_RS05995;old_locus_tag=CCO47_05995 NZ_CP075113.1 Protein Homology CDS 1236559 1238103 . - 0 ID=cds-WP_000734241.1;Parent=gene-CCO47_RS05995;Dbxref=GenBank:WP_000734241.1;Name=WP_000734241.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=CCO47_RS05995;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_000734241.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1238104 1238337 . - . ID=gene-CCO47_RS06000;Name=CCO47_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06000;old_locus_tag=CCO47_06000 NZ_CP075113.1 Protein Homology CDS 1238104 1238337 . - 0 ID=cds-WP_001747289.1;Parent=gene-CCO47_RS06000;Dbxref=GenBank:WP_001747289.1;Name=WP_001747289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461501.1;locus_tag=CCO47_RS06000;product=hypothetical protein;protein_id=WP_001747289.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1238359 1242246 . + . ID=gene-CCO47_RS06005;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=CCO47_RS06005;old_locus_tag=CCO47_06005 NZ_CP075113.1 Protein Homology CDS 1238359 1242246 . + 0 ID=cds-WP_000970028.1;Parent=gene-CCO47_RS06005;Dbxref=GenBank:WP_000970028.1;Name=WP_000970028.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461500.1;locus_tag=CCO47_RS06005;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_000970028.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1242896 1244326 . + . ID=gene-CCO47_RS06010;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=CCO47_RS06010;old_locus_tag=CCO47_06010 NZ_CP075113.1 Protein Homology CDS 1242896 1244326 . + 0 ID=cds-WP_001676035.1;Parent=gene-CCO47_RS06010;Dbxref=GenBank:WP_001676035.1;Name=WP_001676035.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001676035.1;locus_tag=CCO47_RS06010;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_001676035.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1244328 1245092 . + . ID=gene-CCO47_RS06015;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=CCO47_RS06015;old_locus_tag=CCO47_06015 NZ_CP075113.1 Protein Homology CDS 1244328 1245092 . + 0 ID=cds-WP_001054239.1;Parent=gene-CCO47_RS06015;Dbxref=GenBank:WP_001054239.1;Name=WP_001054239.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461498.1;locus_tag=CCO47_RS06015;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_001054239.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1245092 1246426 . + . ID=gene-CCO47_RS06020;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=CCO47_RS06020;old_locus_tag=CCO47_06020 NZ_CP075113.1 Protein Homology CDS 1245092 1246426 . + 0 ID=cds-WP_024131115.1;Parent=gene-CCO47_RS06020;Dbxref=GenBank:WP_024131115.1;Name=WP_024131115.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311447.1;locus_tag=CCO47_RS06020;product=two-component system response regulator GlrR;protein_id=WP_024131115.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1246503 1246841 . + . ID=gene-CCO47_RS06025;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=CCO47_RS06025;old_locus_tag=CCO47_06025 NZ_CP075113.1 Protein Homology CDS 1246503 1246841 . + 0 ID=cds-WP_000717694.1;Parent=gene-CCO47_RS06025;Dbxref=GenBank:WP_000717694.1;Name=WP_000717694.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=CCO47_RS06025;product=nitrogen regulatory protein P-II;protein_id=WP_000717694.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1246890 1248350 . - . ID=gene-CCO47_RS06030;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=CCO47_RS06030;old_locus_tag=CCO47_06030 NZ_CP075113.1 Protein Homology CDS 1246890 1248350 . - 0 ID=cds-WP_000856793.1;Parent=gene-CCO47_RS06030;Dbxref=GenBank:WP_000856793.1;Name=WP_000856793.1;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461495.1;locus_tag=CCO47_RS06030;product=dipeptide permease DtpD;protein_id=WP_000856793.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1248406 1250550 . - . ID=gene-CCO47_RS06035;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=CCO47_RS06035;old_locus_tag=CCO47_06035 NZ_CP075113.1 Protein Homology CDS 1248406 1250550 . - 0 ID=cds-WP_001100658.1;Parent=gene-CCO47_RS06035;Dbxref=GenBank:WP_001100658.1;Name=WP_001100658.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461494.1;locus_tag=CCO47_RS06035;product=lysine decarboxylase CadA;protein_id=WP_001100658.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1250633 1251964 . - . ID=gene-CCO47_RS06040;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=CCO47_RS06040;old_locus_tag=CCO47_06040 NZ_CP075113.1 Protein Homology CDS 1250633 1251964 . - 0 ID=cds-WP_000100008.1;Parent=gene-CCO47_RS06040;Dbxref=GenBank:WP_000100008.1;Name=WP_000100008.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=CCO47_RS06040;product=cadaverine/lysine antiporter;protein_id=WP_000100008.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1252325 1253869 . - . ID=gene-CCO47_RS06045;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=CCO47_RS06045;old_locus_tag=CCO47_06045 NZ_CP075113.1 Protein Homology CDS 1252325 1253869 . - 0 ID=cds-WP_001187144.1;Parent=gene-CCO47_RS06045;Dbxref=GenBank:WP_001187144.1;Name=WP_001187144.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=CCO47_RS06045;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_001187144.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1254051 1255241 . - . ID=gene-CCO47_RS06050;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=CCO47_RS06050;old_locus_tag=CCO47_06050 NZ_CP075113.1 Protein Homology CDS 1254051 1255241 . - 0 ID=cds-WP_000883146.1;Parent=gene-CCO47_RS06050;Dbxref=GenBank:WP_000883146.1;Name=WP_000883146.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461491.1;locus_tag=CCO47_RS06050;product=NO-inducible flavohemoprotein;protein_id=WP_000883146.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1255566 1256819 . + . ID=gene-CCO47_RS06055;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=CCO47_RS06055;old_locus_tag=CCO47_06055 NZ_CP075113.1 Protein Homology CDS 1255566 1256819 . + 0 ID=cds-WP_000919178.1;Parent=gene-CCO47_RS06055;Dbxref=GenBank:WP_000919178.1;Name=WP_000919178.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from L-serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=CCO47_RS06055;product=serine hydroxymethyltransferase;protein_id=WP_000919178.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1257015 1258154 . + . ID=gene-CCO47_RS06060;Name=CCO47_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06060;old_locus_tag=CCO47_06060 NZ_CP075113.1 Protein Homology CDS 1257015 1258154 . + 0 ID=cds-WP_001173720.1;Parent=gene-CCO47_RS06060;Dbxref=GenBank:WP_001173720.1;Name=WP_001173720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461489.1;locus_tag=CCO47_RS06060;product=3-phenylpropionate MFS transporter;protein_id=WP_001173720.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1258149 1259426 . - . ID=gene-CCO47_RS06065;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=CCO47_RS06065;old_locus_tag=CCO47_06065 NZ_CP075113.1 Protein Homology CDS 1258149 1259426 . - 0 ID=cds-WP_000982965.1;Parent=gene-CCO47_RS06065;Dbxref=GenBank:WP_000982965.1;Name=WP_000982965.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461488.1;locus_tag=CCO47_RS06065;product=stationary phase inducible protein CsiE;protein_id=WP_000982965.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1259552 1260190 . + . ID=gene-CCO47_RS06070;Name=CCO47_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06070;old_locus_tag=CCO47_06070 NZ_CP075113.1 Protein Homology CDS 1259552 1260190 . + 0 ID=cds-WP_000805728.1;Parent=gene-CCO47_RS06070;Dbxref=GenBank:WP_000805728.1;Name=WP_000805728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461487.1;locus_tag=CCO47_RS06070;product=DUF1007 family protein;protein_id=WP_000805728.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1260181 1261167 . + . ID=gene-CCO47_RS06075;Name=CCO47_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06075;old_locus_tag=CCO47_06075 NZ_CP075113.1 Protein Homology CDS 1260181 1261167 . + 0 ID=cds-WP_000111020.1;Parent=gene-CCO47_RS06075;Dbxref=GenBank:WP_000111020.1;Name=WP_000111020.1;Ontology_term=GO:0035444,GO:0015099,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=nickel cation transmembrane transport|0035444||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=CCO47_RS06075;product=nickel/cobalt transporter;protein_id=WP_000111020.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1261168 1262181 . - . ID=gene-CCO47_RS06080;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=CCO47_RS06080;old_locus_tag=CCO47_06080 NZ_CP075113.1 Protein Homology CDS 1261168 1262181 . - 0 ID=cds-WP_000020685.1;Parent=gene-CCO47_RS06080;Dbxref=GenBank:WP_000020685.1;Name=WP_000020685.1;Ontology_term=GO:0006790,GO:0016002;gbkey=CDS;gene=asrC;go_function=sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461485.1;locus_tag=CCO47_RS06080;product=sulfite reductase subunit C;protein_id=WP_000020685.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1262192 1263010 . - . ID=gene-CCO47_RS06085;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=CCO47_RS06085;old_locus_tag=CCO47_06085 NZ_CP075113.1 Protein Homology CDS 1262192 1263010 . - 0 ID=cds-WP_000017587.1;Parent=gene-CCO47_RS06085;Dbxref=GenBank:WP_000017587.1;Name=WP_000017587.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrB;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461484.1;locus_tag=CCO47_RS06085;product=anaerobic sulfite reductase subunit AsrB;protein_id=WP_000017587.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1263014 1264057 . - . ID=gene-CCO47_RS06090;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=protein_coding;locus_tag=CCO47_RS06090;old_locus_tag=CCO47_06090 NZ_CP075113.1 Protein Homology CDS 1263014 1264057 . - 0 ID=cds-WP_000985209.1;Parent=gene-CCO47_RS06090;Dbxref=GenBank:WP_000985209.1;Name=WP_000985209.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrA;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461483.1;locus_tag=CCO47_RS06090;product=anaerobic sulfite reductase subunit AsrA;protein_id=WP_000985209.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1264239 1265051 . - . ID=gene-CCO47_RS06095;Name=CCO47_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06095;old_locus_tag=CCO47_06095 NZ_CP075113.1 Protein Homology CDS 1264239 1265051 . - 0 ID=cds-WP_000174951.1;Parent=gene-CCO47_RS06095;Dbxref=GenBank:WP_000174951.1;Name=WP_000174951.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461482.1;locus_tag=CCO47_RS06095;product=alpha/beta hydrolase;protein_id=WP_000174951.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1265196 1265999 . - . ID=gene-CCO47_RS06100;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=CCO47_RS06100;old_locus_tag=CCO47_06100 NZ_CP075113.1 Protein Homology CDS 1265196 1265999 . - 0 ID=cds-WP_000553467.1;Parent=gene-CCO47_RS06100;Dbxref=GenBank:WP_000553467.1;Name=WP_000553467.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=CCO47_RS06100;product=inositol-1-monophosphatase;protein_id=WP_000553467.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1266118 1266849 . + . ID=gene-CCO47_RS06105;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=CCO47_RS06105;old_locus_tag=CCO47_06105 NZ_CP075113.1 Protein Homology CDS 1266118 1266849 . + 0 ID=cds-WP_000940039.1;Parent=gene-CCO47_RS06105;Dbxref=GenBank:WP_000940039.1;Name=WP_000940039.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461480.1;locus_tag=CCO47_RS06105;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_000940039.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1267009 1267503 . + . ID=gene-CCO47_RS06110;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=CCO47_RS06110;old_locus_tag=CCO47_06110 NZ_CP075113.1 Protein Homology CDS 1267009 1267503 . + 0 ID=cds-WP_001241346.1;Parent=gene-CCO47_RS06110;Dbxref=GenBank:WP_001241346.1;Name=WP_001241346.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=CCO47_RS06110;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241346.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1267684 1268898 . + . ID=gene-CCO47_RS06115;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=CCO47_RS06115;old_locus_tag=CCO47_06115 NZ_CP075113.1 Protein Homology CDS 1267684 1268898 . + 0 ID=cds-WP_000775263.1;Parent=gene-CCO47_RS06115;Dbxref=GenBank:WP_000775263.1;Name=WP_000775263.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=CCO47_RS06115;product=cysteine desulfurase;protein_id=WP_000775263.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1268926 1269312 . + . ID=gene-CCO47_RS06120;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=CCO47_RS06120;old_locus_tag=CCO47_06120 NZ_CP075113.1 Protein Homology CDS 1268926 1269312 . + 0 ID=cds-WP_000331704.1;Parent=gene-CCO47_RS06120;Dbxref=GenBank:WP_000331704.1;Name=WP_000331704.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=CCO47_RS06120;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331704.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1269341 1269664 . + . ID=gene-CCO47_RS06125;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=CCO47_RS06125;old_locus_tag=CCO47_06125 NZ_CP075113.1 Protein Homology CDS 1269341 1269664 . + 0 ID=cds-WP_000028952.1;Parent=gene-CCO47_RS06125;Dbxref=GenBank:WP_000028952.1;Name=WP_000028952.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461476.1;locus_tag=CCO47_RS06125;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028952.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1269860 1270375 . + . ID=gene-CCO47_RS06130;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=CCO47_RS06130;old_locus_tag=CCO47_06130 NZ_CP075113.1 Protein Homology CDS 1269860 1270375 . + 0 ID=cds-WP_000384398.1;Parent=gene-CCO47_RS06130;Dbxref=GenBank:WP_000384398.1;Name=WP_000384398.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461475.1;locus_tag=CCO47_RS06130;product=co-chaperone HscB;protein_id=WP_000384398.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1270388 1272238 . + . ID=gene-CCO47_RS06135;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=CCO47_RS06135;old_locus_tag=CCO47_06135 NZ_CP075113.1 Protein Homology CDS 1270388 1272238 . + 0 ID=cds-WP_001196651.1;Parent=gene-CCO47_RS06135;Dbxref=GenBank:WP_001196651.1;Name=WP_001196651.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=CCO47_RS06135;product=Fe-S protein assembly chaperone HscA;protein_id=WP_001196651.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1272240 1272575 . + . ID=gene-CCO47_RS06140;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=CCO47_RS06140;old_locus_tag=CCO47_06140 NZ_CP075113.1 Protein Homology CDS 1272240 1272575 . + 0 ID=cds-WP_001124466.1;Parent=gene-CCO47_RS06140;Dbxref=GenBank:WP_001124466.1;Name=WP_001124466.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=CCO47_RS06140;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124466.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1272587 1272787 . + . ID=gene-CCO47_RS06145;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=CCO47_RS06145;old_locus_tag=CCO47_06145 NZ_CP075113.1 Protein Homology CDS 1272587 1272787 . + 0 ID=cds-WP_000523621.1;Parent=gene-CCO47_RS06145;Dbxref=GenBank:WP_000523621.1;Name=WP_000523621.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=CCO47_RS06145;product=Fe-S cluster assembly protein IscX;protein_id=WP_000523621.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1272965 1274248 . + . ID=gene-CCO47_RS06150;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=CCO47_RS06150;old_locus_tag=CCO47_06150 NZ_CP075113.1 Protein Homology CDS 1272965 1274248 . + 0 ID=cds-WP_000133534.1;Parent=gene-CCO47_RS06150;Dbxref=GenBank:WP_000133534.1;Name=WP_000133534.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461471.1;locus_tag=CCO47_RS06150;product=aminopeptidase PepB;protein_id=WP_000133534.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1274358 1275134 . + . ID=gene-CCO47_RS06155;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=CCO47_RS06155;old_locus_tag=CCO47_06155 NZ_CP075113.1 Protein Homology CDS 1274358 1275134 . + 0 ID=cds-WP_024132403.1;Parent=gene-CCO47_RS06155;Dbxref=GenBank:WP_024132403.1;Name=WP_024132403.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=CCO47_RS06155;product=enhanced serine sensitivity protein SseB;protein_id=WP_024132403.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1275171 1275287 . - . ID=gene-CCO47_RS24075;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=CCO47_RS24075 NZ_CP075113.1 Protein Homology CDS 1275171 1275287 . - 0 ID=cds-WP_242627550.1;Parent=gene-CCO47_RS24075;Dbxref=GenBank:WP_242627550.1;Name=WP_242627550.1;gbkey=CDS;gene=timP;inference=COORDINATES: protein motif:HMM:NF040796.1;locus_tag=CCO47_RS24075;product=small toxic inner membrane protein TimP;protein_id=WP_242627550.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1275703 1276371 . - . ID=gene-CCO47_RS06160;Name=CCO47_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06160;old_locus_tag=CCO47_06160 NZ_CP075113.1 Protein Homology CDS 1275703 1276371 . - 0 ID=cds-WP_000355382.1;Parent=gene-CCO47_RS06160;Dbxref=GenBank:WP_000355382.1;Name=WP_000355382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461469.1;locus_tag=CCO47_RS06160;product=DUF5066 family protein;protein_id=WP_000355382.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1276413 1276637 . + . ID=gene-CCO47_RS06165;Name=CCO47_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06165;old_locus_tag=CCO47_06165 NZ_CP075113.1 Protein Homology CDS 1276413 1276637 . + 0 ID=cds-WP_012535673.1;Parent=gene-CCO47_RS06165;Dbxref=GenBank:WP_012535673.1;Name=WP_012535673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344128.1;locus_tag=CCO47_RS06165;product=hypothetical protein;protein_id=WP_012535673.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1276617 1277459 . - . ID=gene-CCO47_RS06170;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=CCO47_RS06170;old_locus_tag=CCO47_06170 NZ_CP075113.1 Protein Homology CDS 1276617 1277459 . - 0 ID=cds-WP_000205241.1;Parent=gene-CCO47_RS06170;Dbxref=GenBank:WP_000205241.1;Name=WP_000205241.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461468.1;locus_tag=CCO47_RS06170;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_000205241.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1277668 1282602 . + . ID=gene-CCO47_RS06175;Name=CCO47_RS06175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS06175;old_locus_tag=CCO47_06175;pseudo=true NZ_CP075113.1 Protein Homology CDS 1277668 1282602 . + 0 ID=cds-CCO47_RS06175;Parent=gene-CCO47_RS06175;Note=internal stop;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=CCO47_RS06175;product=alpha-2-macroglobulin family protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1282603 1284918 . + . ID=gene-CCO47_RS06180;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=CCO47_RS06180;old_locus_tag=CCO47_06180 NZ_CP075113.1 Protein Homology CDS 1282603 1284918 . + 0 ID=cds-WP_001014766.1;Parent=gene-CCO47_RS06180;Dbxref=GenBank:WP_001014766.1;Name=WP_001014766.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=CCO47_RS06180;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_001014766.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1285074 1287452 . + . ID=gene-CCO47_RS06185;Name=CCO47_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06185;old_locus_tag=CCO47_06185 NZ_CP075113.1 Protein Homology CDS 1285074 1287452 . + 0 ID=cds-WP_001531907.1;Parent=gene-CCO47_RS06185;Dbxref=GenBank:WP_001531907.1;Name=WP_001531907.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664463.1;locus_tag=CCO47_RS06185;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_001531907.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1287449 1288078 . + . ID=gene-CCO47_RS06190;Name=CCO47_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06190;old_locus_tag=CCO47_06190 NZ_CP075113.1 Protein Homology CDS 1287449 1288078 . + 0 ID=cds-WP_000077435.1;Parent=gene-CCO47_RS06190;Dbxref=GenBank:WP_000077435.1;Name=WP_000077435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461464.1;locus_tag=CCO47_RS06190;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_000077435.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1288071 1288880 . + . ID=gene-CCO47_RS06195;Name=CCO47_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06195;old_locus_tag=CCO47_06195 NZ_CP075113.1 Protein Homology CDS 1288071 1288880 . + 0 ID=cds-WP_000544895.1;Parent=gene-CCO47_RS06195;Dbxref=GenBank:WP_000544895.1;Name=WP_000544895.1;Ontology_term=GO:0019645,GO:0009389,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461463.2;locus_tag=CCO47_RS06195;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000544895.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1288880 1289743 . + . ID=gene-CCO47_RS06200;Name=CCO47_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06200;old_locus_tag=CCO47_06200 NZ_CP075113.1 Protein Homology CDS 1288880 1289743 . + 0 ID=cds-WP_000247780.1;Parent=gene-CCO47_RS06200;Dbxref=GenBank:WP_000247780.1;Name=WP_000247780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461462.1;locus_tag=CCO47_RS06200;product=4Fe-4S binding protein;protein_id=WP_000247780.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1289864 1290295 . + . ID=gene-CCO47_RS06205;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=CCO47_RS06205;old_locus_tag=CCO47_06205 NZ_CP075113.1 Protein Homology CDS 1289864 1290295 . + 0 ID=cds-WP_000963846.1;Parent=gene-CCO47_RS06205;Dbxref=GenBank:WP_000963846.1;Name=WP_000963846.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=CCO47_RS06205;product=nucleoside-diphosphate kinase;protein_id=WP_000963846.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1290502 1291668 . + . ID=gene-CCO47_RS06210;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;gene_synonym=trmG;locus_tag=CCO47_RS06210;old_locus_tag=CCO47_06210 NZ_CP075113.1 Protein Homology CDS 1290502 1291668 . + 0 ID=cds-WP_000003206.1;Parent=gene-CCO47_RS06210;Dbxref=GenBank:WP_000003206.1;Name=WP_000003206.1;gbkey=CDS;gene=rlmN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461460.1;locus_tag=CCO47_RS06210;product=dual-specificity RNA methyltransferase RlmN;protein_id=WP_000003206.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1291960 1292964 . + . ID=gene-CCO47_RS06215;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=CCO47_RS06215;old_locus_tag=CCO47_06215 NZ_CP075113.1 Protein Homology CDS 1291960 1292964 . + 0 ID=cds-WP_001090894.1;Parent=gene-CCO47_RS06215;Dbxref=GenBank:WP_001090894.1;Name=WP_001090894.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461459.1;locus_tag=CCO47_RS06215;product=cytoskeleton protein RodZ;protein_id=WP_001090894.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1292991 1294109 . + . ID=gene-CCO47_RS06220;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=CCO47_RS06220;old_locus_tag=CCO47_06220 NZ_CP075113.1 Protein Homology CDS 1292991 1294109 . + 0 ID=cds-WP_000551804.1;Parent=gene-CCO47_RS06220;Dbxref=GenBank:WP_000551804.1;Name=WP_000551804.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461458.1;locus_tag=CCO47_RS06220;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551804.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1294220 1295494 . + . ID=gene-CCO47_RS06225;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=CCO47_RS06225;old_locus_tag=CCO47_06225 NZ_CP075113.1 Protein Homology CDS 1294220 1295494 . + 0 ID=cds-WP_001107146.1;Parent=gene-CCO47_RS06225;Dbxref=GenBank:WP_001107146.1;Name=WP_001107146.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461457.1;locus_tag=CCO47_RS06225;product=histidine--tRNA ligase;protein_id=WP_001107146.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1295508 1296128 . + . ID=gene-CCO47_RS06230;Name=CCO47_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06230;old_locus_tag=CCO47_06230 NZ_CP075113.1 Protein Homology CDS 1295508 1296128 . + 0 ID=cds-WP_000409190.1;Parent=gene-CCO47_RS06230;Dbxref=GenBank:WP_000409190.1;Name=WP_000409190.1;Ontology_term=GO:0005515,GO:0044877;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-containing complex binding|0044877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461456.1;locus_tag=CCO47_RS06230;product=YfgM family protein;protein_id=WP_000409190.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1296139 1297317 . + . ID=gene-CCO47_RS06235;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=CCO47_RS06235;old_locus_tag=CCO47_06235 NZ_CP075113.1 Protein Homology CDS 1296139 1297317 . + 0 ID=cds-WP_001177069.1;Parent=gene-CCO47_RS06235;Dbxref=GenBank:WP_001177069.1;Name=WP_001177069.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461455.1;locus_tag=CCO47_RS06235;product=outer membrane protein assembly factor BamB;protein_id=WP_001177069.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1297434 1298906 . + . ID=gene-CCO47_RS06240;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=CCO47_RS06240;old_locus_tag=CCO47_06240 NZ_CP075113.1 Protein Homology CDS 1297434 1298906 . + 0 ID=cds-WP_000249411.1;Parent=gene-CCO47_RS06240;Dbxref=GenBank:WP_000249411.1;Name=WP_000249411.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=CCO47_RS06240;product=ribosome biogenesis GTPase Der;protein_id=WP_000249411.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1298995 1299216 . + . ID=gene-CCO47_RS06245;Name=CCO47_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06245;old_locus_tag=CCO47_06245 NZ_CP075113.1 Protein Homology CDS 1298995 1299216 . + 0 ID=cds-WP_000406469.1;Parent=gene-CCO47_RS06245;Dbxref=GenBank:WP_000406469.1;Name=WP_000406469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461453.1;locus_tag=CCO47_RS06245;product=zinc ribbon domain-containing protein;protein_id=WP_000406469.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1299562 1301754 . + . ID=gene-CCO47_RS06250;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=protein_coding;locus_tag=CCO47_RS06250;old_locus_tag=CCO47_06250 NZ_CP075113.1 Protein Homology CDS 1299562 1301754 . + 0 ID=cds-WP_000252216.1;Parent=gene-CCO47_RS06250;Dbxref=GenBank:WP_000252216.1;Name=WP_000252216.1;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=CCO47_RS06250;product=intimin-like inverse autotransporter SinH;protein_id=WP_000252216.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1301812 1302771 . + . ID=gene-CCO47_RS06255;Name=CCO47_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06255;old_locus_tag=CCO47_06255 NZ_CP075113.1 Protein Homology CDS 1301812 1302771 . + 0 ID=cds-WP_001149065.1;Parent=gene-CCO47_RS06255;Dbxref=GenBank:WP_001149065.1;Name=WP_001149065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461451.1;locus_tag=CCO47_RS06255;product=SinI family autotransporter-associated protein;protein_id=WP_001149065.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1302891 1308487 . + . ID=gene-CCO47_RS06260;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=pseudogene;locus_tag=CCO47_RS06260;old_locus_tag=CCO47_06260;pseudo=true NZ_CP075113.1 Protein Homology CDS 1302891 1308487 . + 0 ID=cds-CCO47_RS06260;Parent=gene-CCO47_RS06260;Note=frameshifted;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461450.1;locus_tag=CCO47_RS06260;product=DUF823/DUF824 repeat adhesin RatA;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1308653 1315947 . + . ID=gene-CCO47_RS06265;Name=ratB;gbkey=Gene;gene=ratB;gene_biotype=pseudogene;locus_tag=CCO47_RS06265;old_locus_tag=CCO47_06265;pseudo=true NZ_CP075113.1 Protein Homology CDS 1308653 1315947 . + 0 ID=cds-CCO47_RS06265;Parent=gene-CCO47_RS06265;Note=frameshifted;gbkey=CDS;gene=ratB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=CCO47_RS06265;product=DUF823/DUF824 repeat adhesin RatB;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1315962 1316048 . + . ID=gene-CCO47_RS06270;Name=CCO47_RS06270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS06270;old_locus_tag=CCO47_06270;partial=true;pseudo=true;start_range=.,1315962 NZ_CP075113.1 Protein Homology CDS 1315962 1316048 . + 0 ID=cds-CCO47_RS06270;Parent=gene-CCO47_RS06270;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=CCO47_RS06270;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1315962;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1316608 1321363 . + . ID=gene-CCO47_RS06275;Name=CCO47_RS06275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS06275;old_locus_tag=CCO47_06275;pseudo=true NZ_CP075113.1 Protein Homology CDS 1316608 1321363 . + 0 ID=cds-CCO47_RS06275;Parent=gene-CCO47_RS06275;Note=frameshifted;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835061.1;locus_tag=CCO47_RS06275;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1321525 1322874 . - . ID=gene-CCO47_RS06280;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=CCO47_RS06280;old_locus_tag=CCO47_06280 NZ_CP075113.1 Protein Homology CDS 1321525 1322874 . - 0 ID=cds-WP_000953167.1;Parent=gene-CCO47_RS06280;Dbxref=GenBank:WP_000953167.1;Name=WP_000953167.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461447.1;locus_tag=CCO47_RS06280;product=exodeoxyribonuclease VII large subunit;protein_id=WP_000953167.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1323035 1324501 . + . ID=gene-CCO47_RS06285;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=CCO47_RS06285;old_locus_tag=CCO47_06285 NZ_CP075113.1 Protein Homology CDS 1323035 1324501 . + 0 ID=cds-WP_000944174.1;Parent=gene-CCO47_RS06285;Dbxref=GenBank:WP_000944174.1;Name=WP_000944174.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=CCO47_RS06285;product=IMP dehydrogenase;protein_id=WP_000944174.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1324571 1326148 . + . ID=gene-CCO47_RS06290;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=CCO47_RS06290;old_locus_tag=CCO47_06290 NZ_CP075113.1 Protein Homology CDS 1324571 1326148 . + 0 ID=cds-WP_000138293.1;Parent=gene-CCO47_RS06290;Dbxref=GenBank:WP_000138293.1;Name=WP_000138293.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=CCO47_RS06290;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138293.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1326284 1326598 . + . ID=gene-CCO47_RS06295;Name=CCO47_RS06295;end_range=1326598,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS06295;old_locus_tag=CCO47_06295;partial=true;pseudo=true;start_range=.,1326284 NZ_CP075113.1 Protein Homology CDS 1326284 1326598 . + 0 ID=cds-CCO47_RS06295;Parent=gene-CCO47_RS06295;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=1326598,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=CCO47_RS06295;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,1326284;transl_table=11 NZ_CP075113.1 RefSeq gene 1326678 1327007 . - . ID=gene-CCO47_RS06300;Name=CCO47_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06300;old_locus_tag=CCO47_06300 NZ_CP075113.1 Protein Homology CDS 1326678 1327007 . - 0 ID=cds-WP_001576299.1;Parent=gene-CCO47_RS06300;Dbxref=GenBank:WP_001576299.1;Name=WP_001576299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461443.1;locus_tag=CCO47_RS06300;product=DUF1493 family protein;protein_id=WP_001576299.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1326992 1327212 . - . ID=gene-CCO47_RS24405;Name=CCO47_RS24405;end_range=1327212,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24405;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 1326992 1327212 . - 0 ID=cds-CCO47_RS24405;Parent=gene-CCO47_RS24405;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1327212,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_125368327.1;locus_tag=CCO47_RS24405;partial=true;product=STM2901 family protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1327480 1327623 . + . ID=gene-CCO47_RS24080;Name=CCO47_RS24080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24080;partial=true;pseudo=true;start_range=.,1327480 NZ_CP075113.1 Protein Homology CDS 1327480 1327623 . + 0 ID=cds-CCO47_RS24080;Parent=gene-CCO47_RS24080;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448901.1;locus_tag=CCO47_RS24080;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1327480;transl_table=11 NZ_CP075113.1 RefSeq gene 1327702 1327893 . - . ID=gene-CCO47_RS06310;Name=CCO47_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06310;old_locus_tag=CCO47_06310 NZ_CP075113.1 Protein Homology CDS 1327702 1327893 . - 0 ID=cds-WP_000075924.1;Parent=gene-CCO47_RS06310;Dbxref=GenBank:WP_000075924.1;Name=WP_000075924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461441.1;locus_tag=CCO47_RS06310;product=YfgG family protein;protein_id=WP_000075924.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1328072 1328209 . + . ID=gene-CCO47_RS06315;Name=CCO47_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06315;old_locus_tag=CCO47_06315 NZ_CP075113.1 Protein Homology CDS 1328072 1328209 . + 0 ID=cds-WP_001540598.1;Parent=gene-CCO47_RS06315;Dbxref=GenBank:WP_001540598.1;Name=WP_001540598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448898.1;locus_tag=CCO47_RS06315;product=hypothetical protein;protein_id=WP_001540598.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1328306 1330519 . + . ID=gene-CCO47_RS06320;Name=CCO47_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06320;old_locus_tag=CCO47_06320 NZ_CP075113.1 Protein Homology CDS 1328306 1330519 . + 0 ID=cds-WP_000773647.1;Parent=gene-CCO47_RS06320;Dbxref=GenBank:WP_000773647.1;Name=WP_000773647.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=CCO47_RS06320;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_000773647.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1330555 1332096 . - . ID=gene-CCO47_RS06325;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=CCO47_RS06325;old_locus_tag=CCO47_06325 NZ_CP075113.1 Protein Homology CDS 1330555 1332096 . - 0 ID=cds-WP_001123330.1;Parent=gene-CCO47_RS06325;Dbxref=GenBank:WP_001123330.1;Name=WP_001123330.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461437.1;locus_tag=CCO47_RS06325;product=exopolyphosphatase;protein_id=WP_001123330.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1332101 1334167 . - . ID=gene-CCO47_RS06330;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=CCO47_RS06330;old_locus_tag=CCO47_06330 NZ_CP075113.1 Protein Homology CDS 1332101 1334167 . - 0 ID=cds-WP_000529554.1;Parent=gene-CCO47_RS06330;Dbxref=GenBank:WP_000529554.1;Name=WP_000529554.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=CCO47_RS06330;product=polyphosphate kinase 1;protein_id=WP_000529554.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1334356 1334994 . - . ID=gene-CCO47_RS06335;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=CCO47_RS06335;old_locus_tag=CCO47_06335 NZ_CP075113.1 Protein Homology CDS 1334356 1334994 . - 0 ID=cds-WP_001028590.1;Parent=gene-CCO47_RS06335;Dbxref=GenBank:WP_001028590.1;Name=WP_001028590.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461435.1;locus_tag=CCO47_RS06335;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001028590.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1334994 1336031 . - . ID=gene-CCO47_RS06340;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=CCO47_RS06340;old_locus_tag=CCO47_06340 NZ_CP075113.1 Protein Homology CDS 1334994 1336031 . - 0 ID=cds-WP_000130477.1;Parent=gene-CCO47_RS06340;Dbxref=GenBank:WP_000130477.1;Name=WP_000130477.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=CCO47_RS06340;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_000130477.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1336444 1337070 . + . ID=gene-CCO47_RS06345;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=CCO47_RS06345;old_locus_tag=CCO47_06345 NZ_CP075113.1 Protein Homology CDS 1336444 1337070 . + 0 ID=cds-WP_000706208.1;Parent=gene-CCO47_RS06345;Dbxref=GenBank:WP_000706208.1;Name=WP_000706208.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=CCO47_RS06345;product=uracil phosphoribosyltransferase;protein_id=WP_000706208.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1337158 1338447 . + . ID=gene-CCO47_RS06350;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=CCO47_RS06350;old_locus_tag=CCO47_06350 NZ_CP075113.1 Protein Homology CDS 1337158 1338447 . + 0 ID=cds-WP_000198351.1;Parent=gene-CCO47_RS06350;Dbxref=GenBank:WP_000198351.1;Name=WP_000198351.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461432.1;locus_tag=CCO47_RS06350;product=uracil permease;protein_id=WP_000198351.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1338542 1339243 . + . ID=gene-CCO47_RS06355;Name=CCO47_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06355;old_locus_tag=CCO47_06355 NZ_CP075113.1 Protein Homology CDS 1338542 1339243 . + 0 ID=cds-WP_061835882.1;Parent=gene-CCO47_RS06355;Dbxref=GenBank:WP_061835882.1;Name=WP_061835882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=CCO47_RS06355;product=DnaA inactivator Hda;protein_id=WP_061835882.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1339270 1339629 . - . ID=gene-CCO47_RS06360;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=CCO47_RS06360;old_locus_tag=CCO47_06360 NZ_CP075113.1 Protein Homology CDS 1339270 1339629 . - 0 ID=cds-WP_000132650.1;Parent=gene-CCO47_RS06360;Dbxref=GenBank:WP_000132650.1;Name=WP_000132650.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461430.1;locus_tag=CCO47_RS06360;product=arsenate reductase (glutaredoxin);protein_id=WP_000132650.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1339669 1341132 . - . ID=gene-CCO47_RS06365;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=CCO47_RS06365;old_locus_tag=CCO47_06365 NZ_CP075113.1 Protein Homology CDS 1339669 1341132 . - 0 ID=cds-WP_000489630.1;Parent=gene-CCO47_RS06365;Dbxref=GenBank:WP_000489630.1;Name=WP_000489630.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461429.1;locus_tag=CCO47_RS06365;product=beta-barrel assembly-enhancing protease;protein_id=WP_000489630.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1341340 1342407 . + . ID=gene-CCO47_RS06370;Name=CCO47_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06370;old_locus_tag=CCO47_06370 NZ_CP075113.1 Protein Homology CDS 1341340 1342407 . + 0 ID=cds-WP_000892056.1;Parent=gene-CCO47_RS06370;Dbxref=GenBank:WP_000892056.1;Name=WP_000892056.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461428.1;locus_tag=CCO47_RS06370;product=AI-2E family transporter;protein_id=WP_000892056.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1342684 1343871 . + . ID=gene-CCO47_RS06375;Name=CCO47_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06375;old_locus_tag=CCO47_06375 NZ_CP075113.1 Protein Homology CDS 1342684 1343871 . + 0 ID=cds-WP_001574769.1;Parent=gene-CCO47_RS06375;Dbxref=GenBank:WP_001574769.1;Name=WP_001574769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667973.1;locus_tag=CCO47_RS06375;product=sugar diacid recognition domain-containing protein;protein_id=WP_001574769.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1343939 1345207 . + . ID=gene-CCO47_RS06380;Name=CCO47_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06380;old_locus_tag=CCO47_06380 NZ_CP075113.1 Protein Homology CDS 1343939 1345207 . + 0 ID=cds-WP_000200859.1;Parent=gene-CCO47_RS06380;Dbxref=GenBank:WP_000200859.1;Name=WP_000200859.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090684.1;locus_tag=CCO47_RS06380;product=GntP family permease;protein_id=WP_000200859.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1345213 1346352 . + . ID=gene-CCO47_RS06385;Name=CCO47_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06385;old_locus_tag=CCO47_06385 NZ_CP075113.1 Protein Homology CDS 1345213 1346352 . + 0 ID=cds-WP_000706370.1;Parent=gene-CCO47_RS06385;Dbxref=GenBank:WP_000706370.1;Name=WP_000706370.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706371.1;locus_tag=CCO47_RS06385;product=glycerate kinase;protein_id=WP_000706370.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1346399 1346869 . - . ID=gene-CCO47_RS06390;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=CCO47_RS06390;old_locus_tag=CCO47_06390 NZ_CP075113.1 Protein Homology CDS 1346399 1346869 . - 0 ID=cds-WP_001068686.1;Parent=gene-CCO47_RS06390;Dbxref=GenBank:WP_001068686.1;Name=WP_001068686.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461426.1;locus_tag=CCO47_RS06390;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068686.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1346869 1347441 . - . ID=gene-CCO47_RS06395;Name=CCO47_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06395;old_locus_tag=CCO47_06395 NZ_CP075113.1 Protein Homology CDS 1346869 1347441 . - 0 ID=cds-WP_000189061.1;Parent=gene-CCO47_RS06395;Dbxref=GenBank:WP_000189061.1;Name=WP_000189061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=CCO47_RS06395;product=glycine cleavage system transcriptional repressor;protein_id=WP_000189061.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1347587 1348465 . + . ID=gene-CCO47_RS06400;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=CCO47_RS06400;old_locus_tag=CCO47_06400 NZ_CP075113.1 Protein Homology CDS 1347587 1348465 . + 0 ID=cds-WP_000494019.1;Parent=gene-CCO47_RS06400;Dbxref=GenBank:WP_000494019.1;Name=WP_000494019.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=L-lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=CCO47_RS06400;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_000494019.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1348482 1349516 . + . ID=gene-CCO47_RS06405;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=CCO47_RS06405;old_locus_tag=CCO47_06405 NZ_CP075113.1 Protein Homology CDS 1348482 1349516 . + 0 ID=cds-WP_000331882.1;Parent=gene-CCO47_RS06405;Dbxref=GenBank:WP_000331882.1;Name=WP_000331882.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461423.1;locus_tag=CCO47_RS06405;product=outer membrane protein assembly factor BamC;protein_id=WP_000331882.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1349691 1350404 . + . ID=gene-CCO47_RS06410;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=CCO47_RS06410;old_locus_tag=CCO47_06410 NZ_CP075113.1 Protein Homology CDS 1349691 1350404 . + 0 ID=cds-WP_001171630.1;Parent=gene-CCO47_RS06410;Dbxref=GenBank:WP_001171630.1;Name=WP_001171630.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=CCO47_RS06410;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001171630.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1350535 1351398 . + . ID=gene-CCO47_RS06415;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=CCO47_RS06415;old_locus_tag=CCO47_06415 NZ_CP075113.1 Protein Homology CDS 1350535 1351398 . + 0 ID=cds-WP_001267525.1;Parent=gene-CCO47_RS06415;Dbxref=GenBank:WP_001267525.1;Name=WP_001267525.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461421.1;locus_tag=CCO47_RS06415;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_001267525.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1351414 1353432 . + . ID=gene-CCO47_RS06420;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=CCO47_RS06420;old_locus_tag=CCO47_06420 NZ_CP075113.1 Protein Homology CDS 1351414 1353432 . + 0 ID=cds-WP_001279814.1;Parent=gene-CCO47_RS06420;Dbxref=GenBank:WP_001279814.1;Name=WP_001279814.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461420.1;locus_tag=CCO47_RS06420;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_001279814.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1353459 1353659 . - . ID=gene-CCO47_RS06425;Name=CCO47_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06425;old_locus_tag=CCO47_06425 NZ_CP075113.1 Protein Homology CDS 1353459 1353659 . - 0 ID=cds-WP_000383842.1;Parent=gene-CCO47_RS06425;Dbxref=GenBank:WP_000383842.1;Name=WP_000383842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461419.1;locus_tag=CCO47_RS06425;product=YpfN family protein;protein_id=WP_000383842.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1353687 1354814 . - . ID=gene-CCO47_RS06430;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=CCO47_RS06430;old_locus_tag=CCO47_06430 NZ_CP075113.1 Protein Homology CDS 1353687 1354814 . - 0 ID=cds-WP_001277825.1;Parent=gene-CCO47_RS06430;Dbxref=GenBank:WP_001277825.1;Name=WP_001277825.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=L-lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=CCO47_RS06430;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001277825.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1354818 1355174 . - . ID=gene-CCO47_RS06435;Name=CCO47_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06435;old_locus_tag=CCO47_06435 NZ_CP075113.1 Protein Homology CDS 1354818 1355174 . - 0 ID=cds-WP_000631925.1;Parent=gene-CCO47_RS06435;Dbxref=GenBank:WP_000631925.1;Name=WP_000631925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461417.1;locus_tag=CCO47_RS06435;product=ArsC family reductase;protein_id=WP_000631925.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1355587 1355646 . + . ID=gene-CCO47_RS06440;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=CCO47_RS06440;old_locus_tag=CCO47_06440 NZ_CP075113.1 Protein Homology CDS 1355587 1355646 . + 0 ID=cds-WP_001386977.1;Parent=gene-CCO47_RS06440;Dbxref=GenBank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=CCO47_RS06440;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1355748 1358861 . - . ID=gene-CCO47_RS06445;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=CCO47_RS06445;old_locus_tag=CCO47_06445 NZ_CP075113.1 Protein Homology CDS 1355748 1358861 . - 0 ID=cds-WP_001263071.1;Parent=gene-CCO47_RS06445;Dbxref=GenBank:WP_001263071.1;Name=WP_001263071.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=CCO47_RS06445;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_001263071.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1359046 1360746 . - . ID=gene-CCO47_RS06450;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=CCO47_RS06450;old_locus_tag=CCO47_06450 NZ_CP075113.1 Protein Homology CDS 1359046 1360746 . - 0 ID=cds-WP_000216812.1;Parent=gene-CCO47_RS06450;Dbxref=GenBank:WP_000216812.1;Name=WP_000216812.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=CCO47_RS06450;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_000216812.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1360932 1362893 . + . ID=gene-CCO47_RS06455;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=CCO47_RS06455;old_locus_tag=CCO47_06455 NZ_CP075113.1 Protein Homology CDS 1360932 1362893 . + 0 ID=cds-WP_001078931.1;Parent=gene-CCO47_RS06455;Dbxref=GenBank:WP_001078931.1;Name=WP_001078931.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=CCO47_RS06455;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_001078931.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1363339 1364637 . - . ID=gene-CCO47_RS06460;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=CCO47_RS06460;old_locus_tag=CCO47_06460 NZ_CP075113.1 Protein Homology CDS 1363339 1364637 . - 0 ID=cds-WP_000673293.1;Parent=gene-CCO47_RS06460;Dbxref=GenBank:WP_000673293.1;Name=WP_000673293.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461413.1;locus_tag=CCO47_RS06460;product=penicillin binding protein PBP4B;protein_id=WP_000673293.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1364841 1365416 . + . ID=gene-CCO47_RS06465;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=CCO47_RS06465;old_locus_tag=CCO47_06465 NZ_CP075113.1 Protein Homology CDS 1364841 1365416 . + 0 ID=cds-WP_000084037.1;Parent=gene-CCO47_RS06465;Dbxref=GenBank:WP_000084037.1;Name=WP_000084037.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461412.1;locus_tag=CCO47_RS06465;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_000084037.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1365541 1366584 . + . ID=gene-CCO47_RS06470;Name=CCO47_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06470;old_locus_tag=CCO47_06470 NZ_CP075113.1 Protein Homology CDS 1365541 1366584 . + 0 ID=cds-WP_001270679.1;Parent=gene-CCO47_RS06470;Dbxref=GenBank:WP_001270679.1;Name=WP_001270679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461411.1;locus_tag=CCO47_RS06470;product=DUF1176 domain-containing protein;protein_id=WP_001270679.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1366712 1366942 . + . ID=gene-CCO47_RS06475;Name=CCO47_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06475;old_locus_tag=CCO47_06475 NZ_CP075113.1 Protein Homology CDS 1366712 1366942 . + 0 ID=cds-WP_000700635.1;Parent=gene-CCO47_RS06475;Dbxref=GenBank:WP_000700635.1;Name=WP_000700635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=CCO47_RS06475;product=hypothetical protein;protein_id=WP_000700635.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1367005 1369005 . - . ID=gene-CCO47_RS06480;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=CCO47_RS06480;old_locus_tag=CCO47_06480 NZ_CP075113.1 Protein Homology CDS 1367005 1369005 . - 0 ID=cds-WP_000087326.1;Parent=gene-CCO47_RS06480;Dbxref=GenBank:WP_000087326.1;Name=WP_000087326.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=CCO47_RS06480;product=transketolase;protein_id=WP_000087326.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1369025 1369975 . - . ID=gene-CCO47_RS06485;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=CCO47_RS06485;old_locus_tag=CCO47_06485 NZ_CP075113.1 Protein Homology CDS 1369025 1369975 . - 0 ID=cds-WP_001072448.1;Parent=gene-CCO47_RS06485;Dbxref=GenBank:WP_001072448.1;Name=WP_001072448.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461408.1;locus_tag=CCO47_RS06485;product=transaldolase;protein_id=WP_001072448.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1370247 1372526 . + . ID=gene-CCO47_RS06490;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=CCO47_RS06490;old_locus_tag=CCO47_06490 NZ_CP075113.1 Protein Homology CDS 1370247 1372526 . + 0 ID=cds-WP_000344299.1;Parent=gene-CCO47_RS06490;Dbxref=GenBank:WP_000344299.1;Name=WP_000344299.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461407.1;locus_tag=CCO47_RS06490;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_000344299.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1372943 1373278 . + . ID=gene-CCO47_RS06495;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=CCO47_RS06495;old_locus_tag=CCO47_06495 NZ_CP075113.1 Protein Homology CDS 1372943 1373278 . + 0 ID=cds-WP_001031445.1;Parent=gene-CCO47_RS06495;Dbxref=GenBank:WP_001031445.1;Name=WP_001031445.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=CCO47_RS06495;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_001031445.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1373291 1373770 . + . ID=gene-CCO47_RS06500;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=CCO47_RS06500;old_locus_tag=CCO47_06500 NZ_CP075113.1 Protein Homology CDS 1373291 1373770 . + 0 ID=cds-WP_000820751.1;Parent=gene-CCO47_RS06500;Dbxref=GenBank:WP_000820751.1;Name=WP_000820751.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461404.1;locus_tag=CCO47_RS06500;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_000820751.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1373748 1374437 . + . ID=gene-CCO47_RS06505;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=CCO47_RS06505;old_locus_tag=CCO47_06505 NZ_CP075113.1 Protein Homology CDS 1373748 1374437 . + 0 ID=cds-WP_000733864.1;Parent=gene-CCO47_RS06505;Dbxref=GenBank:WP_000733864.1;Name=WP_000733864.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=CCO47_RS06505;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_000733864.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1374434 1375237 . + . ID=gene-CCO47_RS06510;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=CCO47_RS06510;old_locus_tag=CCO47_06510 NZ_CP075113.1 Protein Homology CDS 1374434 1375237 . + 0 ID=cds-WP_000997654.1;Parent=gene-CCO47_RS06510;Dbxref=GenBank:WP_000997654.1;Name=WP_000997654.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461402.1;locus_tag=CCO47_RS06510;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_000997654.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1375234 1376250 . + . ID=gene-CCO47_RS06515;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CCO47_RS06515;old_locus_tag=CCO47_06515 NZ_CP075113.1 Protein Homology CDS 1375234 1376250 . + 0 ID=cds-WP_000582938.1;Parent=gene-CCO47_RS06515;Dbxref=GenBank:WP_000582938.1;Name=WP_000582938.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=CCO47_RS06515;product=phosphate acetyltransferase;protein_id=WP_000582938.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1376291 1376581 . + . ID=gene-CCO47_RS06520;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=CCO47_RS06520;old_locus_tag=CCO47_06520 NZ_CP075113.1 Protein Homology CDS 1376291 1376581 . + 0 ID=cds-WP_000387716.1;Parent=gene-CCO47_RS06520;Dbxref=GenBank:WP_000387716.1;Name=WP_000387716.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=CCO47_RS06520;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387716.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1376694 1376981 . + . ID=gene-CCO47_RS06525;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=CCO47_RS06525;old_locus_tag=CCO47_06525 NZ_CP075113.1 Protein Homology CDS 1376694 1376981 . + 0 ID=cds-WP_001522340.1;Parent=gene-CCO47_RS06525;Dbxref=GenBank:WP_001522340.1;Name=WP_001522340.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=CCO47_RS06525;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_001522340.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1376993 1378396 . + . ID=gene-CCO47_RS06530;Name=CCO47_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06530;old_locus_tag=CCO47_06530 NZ_CP075113.1 Protein Homology CDS 1376993 1378396 . + 0 ID=cds-WP_001075640.1;Parent=gene-CCO47_RS06530;Dbxref=GenBank:WP_001075640.1;Name=WP_001075640.1;Ontology_term=GO:0004029,GO:0008774;gbkey=CDS;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA,acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=CCO47_RS06530;product=aldehyde dehydrogenase family protein;protein_id=WP_001075640.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1378407 1379246 . + . ID=gene-CCO47_RS06535;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=CCO47_RS06535;old_locus_tag=CCO47_06535 NZ_CP075113.1 Protein Homology CDS 1378407 1379246 . + 0 ID=cds-WP_000929675.1;Parent=gene-CCO47_RS06535;Dbxref=GenBank:WP_000929675.1;Name=WP_000929675.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461397.1;locus_tag=CCO47_RS06535;product=ethanolamine utilization protein EutJ;protein_id=WP_000929675.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1379236 1380423 . + . ID=gene-CCO47_RS06540;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=CCO47_RS06540;old_locus_tag=CCO47_06540 NZ_CP075113.1 Protein Homology CDS 1379236 1380423 . + 0 ID=cds-WP_001147501.1;Parent=gene-CCO47_RS06540;Dbxref=GenBank:WP_001147501.1;Name=WP_001147501.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461396.1;locus_tag=CCO47_RS06540;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_001147501.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1380543 1381769 . + . ID=gene-CCO47_RS06545;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=CCO47_RS06545;old_locus_tag=CCO47_06545 NZ_CP075113.1 Protein Homology CDS 1380543 1381769 . + 0 ID=cds-WP_000512354.1;Parent=gene-CCO47_RS06545;Dbxref=GenBank:WP_000512354.1;Name=WP_000512354.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=CCO47_RS06545;product=ethanolamine utilization protein EutH;protein_id=WP_000512354.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1381766 1383169 . + . ID=gene-CCO47_RS06550;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=CCO47_RS06550;old_locus_tag=CCO47_06550 NZ_CP075113.1 Protein Homology CDS 1381766 1383169 . + 0 ID=cds-WP_001097518.1;Parent=gene-CCO47_RS06550;Dbxref=GenBank:WP_001097518.1;Name=WP_001097518.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=CCO47_RS06550;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_001097518.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1383181 1384542 . + . ID=gene-CCO47_RS06555;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=CCO47_RS06555;old_locus_tag=CCO47_06555 NZ_CP075113.1 Protein Homology CDS 1383181 1384542 . + 0 ID=cds-WP_000769983.1;Parent=gene-CCO47_RS06555;Dbxref=GenBank:WP_000769983.1;Name=WP_000769983.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461393.1;locus_tag=CCO47_RS06555;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_000769983.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1384561 1385457 . + . ID=gene-CCO47_RS06560;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=CCO47_RS06560;old_locus_tag=CCO47_06560 NZ_CP075113.1 Protein Homology CDS 1384561 1385457 . + 0 ID=cds-WP_000372354.1;Parent=gene-CCO47_RS06560;Dbxref=GenBank:WP_000372354.1;Name=WP_000372354.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461392.1;locus_tag=CCO47_RS06560;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_000372354.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1385467 1386126 . + . ID=gene-CCO47_RS06565;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=CCO47_RS06565;old_locus_tag=CCO47_06565 NZ_CP075113.1 Protein Homology CDS 1385467 1386126 . + 0 ID=cds-WP_001111056.1;Parent=gene-CCO47_RS06565;Dbxref=GenBank:WP_001111056.1;Name=WP_001111056.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=CCO47_RS06565;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_001111056.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1386139 1386633 . + . ID=gene-CCO47_RS06570;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=CCO47_RS06570;old_locus_tag=CCO47_06570 NZ_CP075113.1 Protein Homology CDS 1386139 1386633 . + 0 ID=cds-WP_000606266.1;Parent=gene-CCO47_RS06570;Dbxref=GenBank:WP_000606266.1;Name=WP_000606266.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=CCO47_RS06570;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_000606266.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1386681 1387733 . + . ID=gene-CCO47_RS06575;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=CCO47_RS06575;old_locus_tag=CCO47_06575 NZ_CP075113.1 Protein Homology CDS 1386681 1387733 . + 0 ID=cds-WP_000753669.1;Parent=gene-CCO47_RS06575;Dbxref=GenBank:WP_000753669.1;Name=WP_000753669.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461389.1;locus_tag=CCO47_RS06575;product=HTH-type transcriptional regulator EutR;protein_id=WP_000753669.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1387933 1389209 . - . ID=gene-CCO47_RS06580;Name=CCO47_RS06580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS06580;old_locus_tag=CCO47_06580;pseudo=true NZ_CP075113.1 Protein Homology CDS 1387933 1389209 . - 0 ID=cds-CCO47_RS06580;Parent=gene-CCO47_RS06580;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461388.1;locus_tag=CCO47_RS06580;product=DUF1963 domain-containing protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1389338 1389667 . - . ID=gene-CCO47_RS06585;Name=CCO47_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06585;old_locus_tag=CCO47_06585 NZ_CP075113.1 Protein Homology CDS 1389338 1389667 . - 0 ID=cds-WP_001194342.1;Parent=gene-CCO47_RS06585;Dbxref=GenBank:WP_001194342.1;Name=WP_001194342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461387.1;locus_tag=CCO47_RS06585;product=hypothetical protein;protein_id=WP_001194342.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1389688 1390587 . - . ID=gene-CCO47_RS06590;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=CCO47_RS06590;old_locus_tag=CCO47_06590 NZ_CP075113.1 Protein Homology CDS 1389688 1390587 . - 0 ID=cds-WP_094912405.1;Parent=gene-CCO47_RS06590;Dbxref=GenBank:WP_094912405.1;Name=WP_094912405.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461386.1;locus_tag=CCO47_RS06590;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_094912405.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1390590 1391459 . - . ID=gene-CCO47_RS06595;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=CCO47_RS06595;old_locus_tag=CCO47_06595 NZ_CP075113.1 Protein Homology CDS 1390590 1391459 . - 0 ID=cds-WP_000102881.1;Parent=gene-CCO47_RS06595;Dbxref=GenBank:WP_000102881.1;Name=WP_000102881.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461385.1;locus_tag=CCO47_RS06595;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102881.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1391672 1392097 . + . ID=gene-CCO47_RS06600;Name=CCO47_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06600;old_locus_tag=CCO47_06600 NZ_CP075113.1 Protein Homology CDS 1391672 1392097 . + 0 ID=cds-WP_000406008.1;Parent=gene-CCO47_RS06600;Dbxref=GenBank:WP_000406008.1;Name=WP_000406008.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=CCO47_RS06600;product=GNAT family acetyltransferase;protein_id=WP_000406008.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1392084 1392533 . + . ID=gene-CCO47_RS06605;Name=CCO47_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06605;old_locus_tag=CCO47_06605 NZ_CP075113.1 Protein Homology CDS 1392084 1392533 . + 0 ID=cds-WP_000842938.1;Parent=gene-CCO47_RS06605;Dbxref=GenBank:WP_000842938.1;Name=WP_000842938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461383.1;locus_tag=CCO47_RS06605;product=DUF2919 domain-containing protein;protein_id=WP_000842938.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1392595 1393170 . + . ID=gene-CCO47_RS06610;Name=CCO47_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06610;old_locus_tag=CCO47_06610 NZ_CP075113.1 Protein Homology CDS 1392595 1393170 . + 0 ID=cds-WP_000838968.1;Parent=gene-CCO47_RS06610;Dbxref=GenBank:WP_000838968.1;Name=WP_000838968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461382.1;locus_tag=CCO47_RS06610;product=RpoE-regulated lipoprotein;protein_id=WP_000838968.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1393265 1394164 . + . ID=gene-CCO47_RS06615;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=CCO47_RS06615;old_locus_tag=CCO47_06615 NZ_CP075113.1 Protein Homology CDS 1393265 1394164 . + 0 ID=cds-WP_000084583.1;Parent=gene-CCO47_RS06615;Dbxref=GenBank:WP_000084583.1;Name=WP_000084583.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461381.1;locus_tag=CCO47_RS06615;product=porphyrinogen peroxidase;protein_id=WP_000084583.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1394402 1395193 . + . ID=gene-CCO47_RS06620;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=CCO47_RS06620;old_locus_tag=CCO47_06620 NZ_CP075113.1 Protein Homology CDS 1394402 1395193 . + 0 ID=cds-WP_000517460.1;Parent=gene-CCO47_RS06620;Dbxref=GenBank:WP_000517460.1;Name=WP_000517460.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461380.1;locus_tag=CCO47_RS06620;product=SDR family oxidoreductase UcpA;protein_id=WP_000517460.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1395351 1396367 . + . ID=gene-CCO47_RS06625;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=CCO47_RS06625;old_locus_tag=CCO47_06625 NZ_CP075113.1 Protein Homology CDS 1395351 1396367 . + 0 ID=cds-WP_000290281.1;Parent=gene-CCO47_RS06625;Dbxref=GenBank:WP_000290281.1;Name=WP_000290281.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461379.1;locus_tag=CCO47_RS06625;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_000290281.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1396367 1397200 . + . ID=gene-CCO47_RS06630;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=CCO47_RS06630;old_locus_tag=CCO47_06630 NZ_CP075113.1 Protein Homology CDS 1396367 1397200 . + 0 ID=cds-WP_000881746.1;Parent=gene-CCO47_RS06630;Dbxref=GenBank:WP_000881746.1;Name=WP_000881746.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=CCO47_RS06630;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_000881746.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1397200 1398075 . + . ID=gene-CCO47_RS06635;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=CCO47_RS06635;old_locus_tag=CCO47_06635 NZ_CP075113.1 Protein Homology CDS 1397200 1398075 . + 0 ID=cds-WP_000852708.1;Parent=gene-CCO47_RS06635;Dbxref=GenBank:WP_000852708.1;Name=WP_000852708.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461377.1;locus_tag=CCO47_RS06635;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000852708.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1398065 1399162 . + . ID=gene-CCO47_RS06640;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=CCO47_RS06640;old_locus_tag=CCO47_06640 NZ_CP075113.1 Protein Homology CDS 1398065 1399162 . + 0 ID=cds-WP_000021076.1;Parent=gene-CCO47_RS06640;Dbxref=GenBank:WP_000021076.1;Name=WP_000021076.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461376.1;locus_tag=CCO47_RS06640;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_000021076.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1399230 1400141 . + . ID=gene-CCO47_RS06645;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=CCO47_RS06645;old_locus_tag=CCO47_06645 NZ_CP075113.1 Protein Homology CDS 1399230 1400141 . + 0 ID=cds-WP_001093883.1;Parent=gene-CCO47_RS06645;Dbxref=GenBank:WP_001093883.1;Name=WP_001093883.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=L-cysteine biosynthetic process from L-serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=CCO47_RS06645;product=cysteine synthase CysM;protein_id=WP_001093883.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1400272 1400811 . - . ID=gene-CCO47_RS06650;Name=CCO47_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06650;old_locus_tag=CCO47_06650 NZ_CP075113.1 Protein Homology CDS 1400272 1400811 . - 0 ID=cds-WP_001119683.1;Parent=gene-CCO47_RS06650;Dbxref=GenBank:WP_001119683.1;Name=WP_001119683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461374.1;locus_tag=CCO47_RS06650;product=transglycosylase domain-containing protein;protein_id=WP_001119683.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1400824 1401204 . - . ID=gene-CCO47_RS06655;Name=CCO47_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06655;old_locus_tag=CCO47_06655 NZ_CP075113.1 Protein Homology CDS 1400824 1401204 . - 0 ID=cds-WP_000710729.1;Parent=gene-CCO47_RS06655;Dbxref=GenBank:WP_000710729.1;Name=WP_000710729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461373.2;locus_tag=CCO47_RS06655;product=YfeK family protein;protein_id=WP_000710729.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1401263 1401982 . - . ID=gene-CCO47_RS06660;Name=CCO47_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06660;old_locus_tag=CCO47_06660 NZ_CP075113.1 Protein Homology CDS 1401263 1401982 . - 0 ID=cds-WP_001263760.1;Parent=gene-CCO47_RS06660;Dbxref=GenBank:WP_001263760.1;Name=WP_001263760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461372.1;locus_tag=CCO47_RS06660;product=type 1 glutamine amidotransferase;protein_id=WP_001263760.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1401997 1403289 . - . ID=gene-CCO47_RS06665;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=CCO47_RS06665;old_locus_tag=CCO47_06665 NZ_CP075113.1 Protein Homology CDS 1401997 1403289 . - 0 ID=cds-WP_000565117.1;Parent=gene-CCO47_RS06665;Dbxref=GenBank:WP_000565117.1;Name=WP_000565117.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptsJ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461371.1;locus_tag=CCO47_RS06665;product=MocR-like B6 salvage transcription factor PtsJ;protein_id=WP_000565117.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1403372 1404238 . + . ID=gene-CCO47_RS06670;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=CCO47_RS06670;old_locus_tag=CCO47_06670 NZ_CP075113.1 Protein Homology CDS 1403372 1404238 . + 0 ID=cds-WP_000529617.1;Parent=gene-CCO47_RS06670;Dbxref=GenBank:WP_000529617.1;Name=WP_000529617.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=CCO47_RS06670;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_000529617.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1404235 1404474 . + . ID=gene-CCO47_RS06675;Name=CCO47_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06675;old_locus_tag=CCO47_06675 NZ_CP075113.1 Protein Homology CDS 1404235 1404474 . + 0 ID=cds-WP_000844541.1;Parent=gene-CCO47_RS06675;Dbxref=GenBank:WP_000844541.1;Name=WP_000844541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461369.1;locus_tag=CCO47_RS06675;product=hypothetical protein;protein_id=WP_000844541.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1404624 1405133 . - . ID=gene-CCO47_RS06680;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=CCO47_RS06680;old_locus_tag=CCO47_06680 NZ_CP075113.1 Protein Homology CDS 1404624 1405133 . - 0 ID=cds-WP_000522253.1;Parent=gene-CCO47_RS06680;Dbxref=GenBank:WP_000522253.1;Name=WP_000522253.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=CCO47_RS06680;product=PTS glucose transporter subunit IIA;protein_id=WP_000522253.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1405174 1406901 . - . ID=gene-CCO47_RS06685;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=CCO47_RS06685;old_locus_tag=CCO47_06685 NZ_CP075113.1 Protein Homology CDS 1405174 1406901 . - 0 ID=cds-WP_000623120.1;Parent=gene-CCO47_RS06685;Dbxref=GenBank:WP_000623120.1;Name=WP_000623120.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461367.1;locus_tag=CCO47_RS06685;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_000623120.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1406950 1407207 . - . ID=gene-CCO47_RS06690;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=CCO47_RS06690;old_locus_tag=CCO47_06690 NZ_CP075113.1 Protein Homology CDS 1406950 1407207 . - 0 ID=cds-WP_000487600.1;Parent=gene-CCO47_RS06690;Dbxref=GenBank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=CCO47_RS06690;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1407591 1408562 . - . ID=gene-CCO47_RS06695;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=CCO47_RS06695;old_locus_tag=CCO47_06695 NZ_CP075113.1 Protein Homology CDS 1407591 1408562 . - 0 ID=cds-WP_000036902.1;Parent=gene-CCO47_RS06695;Dbxref=GenBank:WP_000036902.1;Name=WP_000036902.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=L-cysteine biosynthetic process from L-serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=CCO47_RS06695;product=cysteine synthase A;protein_id=WP_000036902.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1408726 1409487 . - . ID=gene-CCO47_RS06700;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=CCO47_RS06700;old_locus_tag=CCO47_06700 NZ_CP075113.1 Protein Homology CDS 1408726 1409487 . - 0 ID=cds-WP_000255008.1;Parent=gene-CCO47_RS06700;Dbxref=GenBank:WP_000255008.1;Name=WP_000255008.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461364.1;locus_tag=CCO47_RS06700;product=sulfate transporter CysZ;protein_id=WP_000255008.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1409719 1410705 . + . ID=gene-CCO47_RS06705;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=CCO47_RS06705;old_locus_tag=CCO47_06705 NZ_CP075113.1 Protein Homology CDS 1409719 1410705 . + 0 ID=cds-WP_000983126.1;Parent=gene-CCO47_RS06705;Dbxref=GenBank:WP_000983126.1;Name=WP_000983126.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461363.1;locus_tag=CCO47_RS06705;product=cell division protein ZipA;protein_id=WP_000983126.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1410777 1412792 . + . ID=gene-CCO47_RS06710;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=CCO47_RS06710;old_locus_tag=CCO47_06710 NZ_CP075113.1 Protein Homology CDS 1410777 1412792 . + 0 ID=cds-WP_000433289.1;Parent=gene-CCO47_RS06710;Dbxref=GenBank:WP_000433289.1;Name=WP_000433289.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461362.1;locus_tag=CCO47_RS06710;product=NAD-dependent DNA ligase LigA;protein_id=WP_000433289.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1412794 1413012 . + . ID=gene-CCO47_RS06715;Name=CCO47_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06715;old_locus_tag=CCO47_06715 NZ_CP075113.1 Protein Homology CDS 1412794 1413012 . + 0 ID=cds-WP_001519708.1;Parent=gene-CCO47_RS06715;Dbxref=GenBank:WP_001519708.1;Name=WP_001519708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=CCO47_RS06715;product=DUF3820 family protein;protein_id=WP_001519708.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1413009 1414007 . - . ID=gene-CCO47_RS06720;Name=CCO47_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06720;old_locus_tag=CCO47_06720 NZ_CP075113.1 Protein Homology CDS 1413009 1414007 . - 0 ID=cds-WP_000765568.1;Parent=gene-CCO47_RS06720;Dbxref=GenBank:WP_000765568.1;Name=WP_000765568.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461360.2;locus_tag=CCO47_RS06720;product=bile acid:sodium symporter family protein;protein_id=WP_000765568.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1414097 1415023 . + . ID=gene-CCO47_RS06725;Name=CCO47_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06725;old_locus_tag=CCO47_06725 NZ_CP075113.1 Protein Homology CDS 1414097 1415023 . + 0 ID=cds-WP_001109831.1;Parent=gene-CCO47_RS06725;Dbxref=GenBank:WP_001109831.1;Name=WP_001109831.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=CCO47_RS06725;product=LysR family transcriptional regulator;protein_id=WP_001109831.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1415085 1415846 . - . ID=gene-CCO47_RS06730;Name=CCO47_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06730;old_locus_tag=CCO47_06730 NZ_CP075113.1 Protein Homology CDS 1415085 1415846 . - 0 ID=cds-WP_000722929.1;Parent=gene-CCO47_RS06730;Dbxref=GenBank:WP_000722929.1;Name=WP_000722929.1;Ontology_term=GO:0015858,GO:0015471,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside-specific channel forming porin activity|0015471||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461358.1;locus_tag=CCO47_RS06730;product=nucleoside-specific channel-forming Tsx family protein;protein_id=WP_000722929.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1416102 1416935 . + . ID=gene-CCO47_RS06735;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=CCO47_RS06735;old_locus_tag=CCO47_06735 NZ_CP075113.1 Protein Homology CDS 1416102 1416935 . + 0 ID=cds-WP_001119760.1;Parent=gene-CCO47_RS06735;Dbxref=GenBank:WP_001119760.1;Name=WP_001119760.1;Ontology_term=GO:0055086,GO:0004731,GO:0005737;gbkey=CDS;gene=xapA;go_component=cytoplasm|0005737||IEA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing small molecule metabolic process|0055086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448816.1;locus_tag=CCO47_RS06735;product=xanthosine phosphorylase;protein_id=WP_001119760.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1416990 1418246 . + . ID=gene-CCO47_RS06740;Name=CCO47_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06740;old_locus_tag=CCO47_06740 NZ_CP075113.1 Protein Homology CDS 1416990 1418246 . + 0 ID=cds-WP_000513237.1;Parent=gene-CCO47_RS06740;Dbxref=GenBank:WP_000513237.1;Name=WP_000513237.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=CCO47_RS06740;product=nucleoside permease;protein_id=WP_000513237.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1418305 1418463 . + . ID=gene-CCO47_RS06745;Name=CCO47_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06745;old_locus_tag=CCO47_06745 NZ_CP075113.1 Protein Homology CDS 1418305 1418463 . + 0 ID=cds-WP_000658727.1;Parent=gene-CCO47_RS06745;Dbxref=GenBank:WP_000658727.1;Name=WP_000658727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658729.1;locus_tag=CCO47_RS06745;product=XapX domain-containing protein;protein_id=WP_000658727.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1418515 1419399 . + . ID=gene-CCO47_RS06750;Name=CCO47_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06750;old_locus_tag=CCO47_06750 NZ_CP075113.1 Protein Homology CDS 1418515 1419399 . + 0 ID=cds-WP_000438884.1;Parent=gene-CCO47_RS06750;Dbxref=GenBank:WP_000438884.1;Name=WP_000438884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461355.1;locus_tag=CCO47_RS06750;product=LysR family transcriptional regulator;protein_id=WP_000438884.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1419665 1419740 . - . ID=gene-CCO47_RS06755;Name=CCO47_RS06755;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS06755;old_locus_tag=CCO47_06755 NZ_CP075113.1 tRNAscan-SE tRNA 1419665 1419740 . - . ID=rna-CCO47_RS06755;Parent=gene-CCO47_RS06755;anticodon=(pos:complement(1419705..1419707));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS06755;product=tRNA-Lys NZ_CP075113.1 tRNAscan-SE exon 1419665 1419740 . - . ID=exon-CCO47_RS06755-1;Parent=rna-CCO47_RS06755;anticodon=(pos:complement(1419705..1419707));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS06755;product=tRNA-Lys NZ_CP075113.1 RefSeq gene 1419745 1419820 . - . ID=gene-CCO47_RS06760;Name=CCO47_RS06760;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS06760;old_locus_tag=CCO47_06760 NZ_CP075113.1 tRNAscan-SE tRNA 1419745 1419820 . - . ID=rna-CCO47_RS06760;Parent=gene-CCO47_RS06760;anticodon=(pos:complement(1419785..1419787));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS06760;product=tRNA-Val NZ_CP075113.1 tRNAscan-SE exon 1419745 1419820 . - . ID=exon-CCO47_RS06760-1;Parent=rna-CCO47_RS06760;anticodon=(pos:complement(1419785..1419787));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS06760;product=tRNA-Val NZ_CP075113.1 RefSeq gene 1419862 1419937 . - . ID=gene-CCO47_RS06765;Name=CCO47_RS06765;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS06765;old_locus_tag=CCO47_06765 NZ_CP075113.1 tRNAscan-SE tRNA 1419862 1419937 . - . ID=rna-CCO47_RS06765;Parent=gene-CCO47_RS06765;anticodon=(pos:complement(1419902..1419904));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS06765;product=tRNA-Val NZ_CP075113.1 tRNAscan-SE exon 1419862 1419937 . - . ID=exon-CCO47_RS06765-1;Parent=rna-CCO47_RS06765;anticodon=(pos:complement(1419902..1419904));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS06765;product=tRNA-Val NZ_CP075113.1 RefSeq gene 1419983 1420058 . - . ID=gene-CCO47_RS06770;Name=CCO47_RS06770;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS06770;old_locus_tag=CCO47_06770 NZ_CP075113.1 tRNAscan-SE tRNA 1419983 1420058 . - . ID=rna-CCO47_RS06770;Parent=gene-CCO47_RS06770;anticodon=(pos:complement(1420023..1420025));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS06770;product=tRNA-Val NZ_CP075113.1 tRNAscan-SE exon 1419983 1420058 . - . ID=exon-CCO47_RS06770-1;Parent=rna-CCO47_RS06770;anticodon=(pos:complement(1420023..1420025));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS06770;product=tRNA-Val NZ_CP075113.1 RefSeq gene 1420317 1421732 . + . ID=gene-CCO47_RS06775;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=CCO47_RS06775;old_locus_tag=CCO47_06775 NZ_CP075113.1 Protein Homology CDS 1420317 1421732 . + 0 ID=cds-WP_000695630.1;Parent=gene-CCO47_RS06775;Dbxref=GenBank:WP_000695630.1;Name=WP_000695630.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461354.1;locus_tag=CCO47_RS06775;product=glutamate--tRNA ligase;protein_id=WP_000695630.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1421786 1422178 . - . ID=gene-CCO47_RS06780;Name=CCO47_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06780;old_locus_tag=CCO47_06780 NZ_CP075113.1 Protein Homology CDS 1421786 1422178 . - 0 ID=cds-WP_000826514.1;Parent=gene-CCO47_RS06780;Dbxref=GenBank:WP_000826514.1;Name=WP_000826514.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461353.1;locus_tag=CCO47_RS06780;product=MerR family transcriptional regulator;protein_id=WP_000826514.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1422180 1422542 . - . ID=gene-CCO47_RS06785;Name=CCO47_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06785;old_locus_tag=CCO47_06785 NZ_CP075113.1 Protein Homology CDS 1422180 1422542 . - 0 ID=cds-WP_000472034.1;Parent=gene-CCO47_RS06785;Dbxref=GenBank:WP_000472034.1;Name=WP_000472034.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461352.1;locus_tag=CCO47_RS06785;product=MerR family transcriptional regulator;protein_id=WP_000472034.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1422764 1422839 . + . ID=gene-CCO47_RS06790;Name=CCO47_RS06790;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS06790;old_locus_tag=CCO47_06790 NZ_CP075113.1 tRNAscan-SE tRNA 1422764 1422839 . + . ID=rna-CCO47_RS06790;Parent=gene-CCO47_RS06790;anticodon=(pos:1422797..1422799);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS06790;product=tRNA-Ala NZ_CP075113.1 tRNAscan-SE exon 1422764 1422839 . + . ID=exon-CCO47_RS06790-1;Parent=rna-CCO47_RS06790;anticodon=(pos:1422797..1422799);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS06790;product=tRNA-Ala NZ_CP075113.1 RefSeq gene 1422882 1422957 . + . ID=gene-CCO47_RS06795;Name=CCO47_RS06795;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS06795;old_locus_tag=CCO47_06795 NZ_CP075113.1 tRNAscan-SE tRNA 1422882 1422957 . + . ID=rna-CCO47_RS06795;Parent=gene-CCO47_RS06795;anticodon=(pos:1422915..1422917);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS06795;product=tRNA-Ala NZ_CP075113.1 tRNAscan-SE exon 1422882 1422957 . + . ID=exon-CCO47_RS06795-1;Parent=rna-CCO47_RS06795;anticodon=(pos:1422915..1422917);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS06795;product=tRNA-Ala NZ_CP075113.1 RefSeq gene 1423148 1425337 . + . ID=gene-CCO47_RS06800;Name=CCO47_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06800;old_locus_tag=CCO47_06800 NZ_CP075113.1 Protein Homology CDS 1423148 1425337 . + 0 ID=cds-WP_000884545.1;Parent=gene-CCO47_RS06800;Dbxref=GenBank:WP_000884545.1;Name=WP_000884545.1;Ontology_term=GO:0000160,GO:0007165,GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461351.1;locus_tag=CCO47_RS06800;product=EAL domain-containing protein;protein_id=WP_000884545.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1425390 1426592 . - . ID=gene-CCO47_RS06805;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=CCO47_RS06805;old_locus_tag=CCO47_06805 NZ_CP075113.1 Protein Homology CDS 1425390 1426592 . - 0 ID=cds-WP_000376346.1;Parent=gene-CCO47_RS06805;Dbxref=GenBank:WP_000376346.1;Name=WP_000376346.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461350.1;locus_tag=CCO47_RS06805;product=nucleoside permease NupC;protein_id=WP_000376346.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1426898 1426942 . + . ID=gene-CCO47_RS24535;Name=CCO47_RS24535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24535 NZ_CP075113.1 Protein Homology CDS 1426898 1426942 . + 0 ID=cds-WP_418338175.1;Parent=gene-CCO47_RS24535;Dbxref=GenBank:WP_418338175.1;Name=WP_418338175.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049535.1;locus_tag=CCO47_RS24535;product=hypothetical protein;protein_id=WP_418338175.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1426935 1428176 . + . ID=gene-CCO47_RS06810;Name=CCO47_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06810;old_locus_tag=CCO47_06810 NZ_CP075113.1 Protein Homology CDS 1426935 1428176 . + 0 ID=cds-WP_000131732.1;Parent=gene-CCO47_RS06810;Dbxref=GenBank:WP_000131732.1;Name=WP_000131732.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461349.1;locus_tag=CCO47_RS06810;product=Nramp family divalent metal transporter;protein_id=WP_000131732.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1428237 1428563 . - . ID=gene-CCO47_RS06815;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=CCO47_RS06815;old_locus_tag=CCO47_06815 NZ_CP075113.1 Protein Homology CDS 1428237 1428563 . - 0 ID=cds-WP_000490091.1;Parent=gene-CCO47_RS06815;Dbxref=GenBank:WP_000490091.1;Name=WP_000490091.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461348.1;locus_tag=CCO47_RS06815;product=DUF2502 domain-containing protein YpeC;protein_id=WP_000490091.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1428677 1429675 . - . ID=gene-CCO47_RS06820;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=CCO47_RS06820;old_locus_tag=CCO47_06820 NZ_CP075113.1 Protein Homology CDS 1428677 1429675 . - 0 ID=cds-WP_000640294.1;Parent=gene-CCO47_RS06820;Dbxref=GenBank:WP_000640294.1;Name=WP_000640294.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461347.1;locus_tag=CCO47_RS06820;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_000640294.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1429855 1431508 . + . ID=gene-CCO47_RS06825;Name=CCO47_RS06825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS06825;old_locus_tag=CCO47_06825;pseudo=true NZ_CP075113.1 Protein Homology CDS 1429855 1431508 . + 0 ID=cds-CCO47_RS06825;Parent=gene-CCO47_RS06825;Note=frameshifted;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461346.1;locus_tag=CCO47_RS06825;product=alpha-keto acid decarboxylase family protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1431528 1432763 . - . ID=gene-CCO47_RS06830;Name=CCO47_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06830;old_locus_tag=CCO47_06830 NZ_CP075113.1 Protein Homology CDS 1431528 1432763 . - 0 ID=cds-WP_000468920.1;Parent=gene-CCO47_RS06830;Dbxref=GenBank:WP_000468920.1;Name=WP_000468920.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=CCO47_RS06830;product=ion channel protein;protein_id=WP_000468920.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1432967 1433932 . + . ID=gene-CCO47_RS06835;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=CCO47_RS06835;old_locus_tag=CCO47_06835 NZ_CP075113.1 Protein Homology CDS 1432967 1433932 . + 0 ID=cds-WP_000170380.1;Parent=gene-CCO47_RS06835;Dbxref=GenBank:WP_000170380.1;Name=WP_000170380.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461344.1;locus_tag=CCO47_RS06835;product=glucokinase;protein_id=WP_000170380.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1434655 1435893 . + . ID=gene-CCO47_RS06840;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=CCO47_RS06840;old_locus_tag=CCO47_06840 NZ_CP075113.1 Protein Homology CDS 1434655 1435893 . + 0 ID=cds-WP_000763118.1;Parent=gene-CCO47_RS06840;Dbxref=GenBank:WP_000763118.1;Name=WP_000763118.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=CCO47_RS06840;product=alanine transaminase;protein_id=WP_000763118.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1435943 1436014 . - . ID=gene-CCO47_RS06845;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=CCO47_RS06845;old_locus_tag=CCO47_06845 NZ_CP075113.1 Protein Homology CDS 1435943 1436014 . - 0 ID=cds-WP_010723117.1;Parent=gene-CCO47_RS06845;Dbxref=GenBank:WP_010723117.1;Name=WP_010723117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=CCO47_RS06845;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1436417 1437337 . - . ID=gene-CCO47_RS06850;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=CCO47_RS06850;old_locus_tag=CCO47_06850 NZ_CP075113.1 Protein Homology CDS 1436417 1437337 . - 0 ID=cds-WP_000484428.1;Parent=gene-CCO47_RS06850;Dbxref=GenBank:WP_000484428.1;Name=WP_000484428.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461342.1;locus_tag=CCO47_RS06850;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_000484428.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1437858 1438100 . + . ID=gene-CCO47_RS06855;Name=CCO47_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06855;old_locus_tag=CCO47_06855 NZ_CP075113.1 Protein Homology CDS 1437858 1438100 . + 0 ID=cds-WP_000639889.1;Parent=gene-CCO47_RS06855;Dbxref=GenBank:WP_000639889.1;Name=WP_000639889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461341.1;locus_tag=CCO47_RS06855;product=YfdY family protein;protein_id=WP_000639889.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1438375 1439766 . - . ID=gene-CCO47_RS06860;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=CCO47_RS06860;old_locus_tag=CCO47_06860 NZ_CP075113.1 Protein Homology CDS 1438375 1439766 . - 0 ID=cds-WP_000955739.1;Parent=gene-CCO47_RS06860;Dbxref=GenBank:WP_000955739.1;Name=WP_000955739.1;Ontology_term=GO:0015760,GO:0035435,GO:0061513;gbkey=CDS;gene=pgtP;go_function=glucose 6-phosphate:phosphate antiporter activity|0061513||IEA;go_process=glucose-6-phosphate transport|0015760||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461340.1;locus_tag=CCO47_RS06860;product=phosphoglycerate transporter PgtP;protein_id=WP_000955739.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1440202 1441395 . + . ID=gene-CCO47_RS06865;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=pseudogene;locus_tag=CCO47_RS06865;old_locus_tag=CCO47_06865;pseudo=true NZ_CP075113.1 Protein Homology CDS 1440202 1441395 . + 0 ID=cds-CCO47_RS06865;Parent=gene-CCO47_RS06865;Note=internal stop;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461339.1;locus_tag=CCO47_RS06865;product=phosphoglycerate transport regulator PgtC;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1441392 1443398 . + . ID=gene-CCO47_RS06870;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=CCO47_RS06870;old_locus_tag=CCO47_06870 NZ_CP075113.1 Protein Homology CDS 1441392 1443398 . + 0 ID=cds-WP_000678498.1;Parent=gene-CCO47_RS06870;Dbxref=GenBank:WP_000678498.1;Name=WP_000678498.1;Ontology_term=GO:0000160,GO:0000155,GO:0005524;gbkey=CDS;gene=pgtB;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=CCO47_RS06870;product=two-component system sensor histidine kinase PgtB;protein_id=WP_000678498.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1443388 1444635 . + . ID=gene-CCO47_RS06875;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=CCO47_RS06875;old_locus_tag=CCO47_06875 NZ_CP075113.1 Protein Homology CDS 1443388 1444635 . + 0 ID=cds-WP_000930836.1;Parent=gene-CCO47_RS06875;Dbxref=GenBank:WP_000930836.1;Name=WP_000930836.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;gene=pgtA;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=CCO47_RS06875;product=two-component system response regulator PgtA;protein_id=WP_000930836.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1444903 1445841 . + . ID=gene-CCO47_RS06880;Name=pgtE;gbkey=Gene;gene=pgtE;gene_biotype=protein_coding;locus_tag=CCO47_RS06880;old_locus_tag=CCO47_06880 NZ_CP075113.1 Protein Homology CDS 1444903 1445841 . + 0 ID=cds-WP_000716011.1;Parent=gene-CCO47_RS06880;Dbxref=GenBank:WP_000716011.1;Name=WP_000716011.1;gbkey=CDS;gene=pgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461336.1;locus_tag=CCO47_RS06880;product=omptin family outer membrane protease PgtE;protein_id=WP_000716011.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1446036 1446257 . + . ID=gene-CCO47_RS06885;Name=CCO47_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06885;old_locus_tag=CCO47_06885 NZ_CP075113.1 Protein Homology CDS 1446036 1446257 . + 0 ID=cds-WP_250637931.1;Parent=gene-CCO47_RS06885;Dbxref=GenBank:WP_250637931.1;Name=WP_250637931.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020812.7;locus_tag=CCO47_RS06885;product=tail spike protein;protein_id=WP_250637931.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1446232 1446339 . + . ID=gene-CCO47_RS24085;Name=CCO47_RS24085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24085 NZ_CP075113.1 Protein Homology CDS 1446232 1446339 . + 0 ID=cds-WP_139780162.1;Parent=gene-CCO47_RS24085;Dbxref=GenBank:WP_139780162.1;Name=WP_139780162.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020812.7;locus_tag=CCO47_RS24085;product=hypothetical protein;protein_id=WP_139780162.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1446712 1447158 . + . ID=gene-CCO47_RS06890;Name=CCO47_RS06890;end_range=1447158,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS06890;old_locus_tag=CCO47_06890;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 1446712 1447158 . + 0 ID=cds-CCO47_RS06890;Parent=gene-CCO47_RS06890;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1447158,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899184.1;locus_tag=CCO47_RS06890;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1447329 1449251 . - . ID=gene-CCO47_RS06895;Name=CCO47_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06895;old_locus_tag=CCO47_06895 NZ_CP075113.1 Protein Homology CDS 1447329 1449251 . - 0 ID=cds-WP_000400618.1;Parent=gene-CCO47_RS06895;Dbxref=GenBank:WP_000400618.1;Name=WP_000400618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400611.1;locus_tag=CCO47_RS06895;product=STY2629 family LPS modification acyltransferase;protein_id=WP_000400618.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1449305 1449523 . - . ID=gene-CCO47_RS06900;Name=CCO47_RS06900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS06900;old_locus_tag=CCO47_06900;partial=true;pseudo=true;start_range=.,1449305 NZ_CP075113.1 Protein Homology CDS 1449305 1449523 . - 0 ID=cds-CCO47_RS06900;Parent=gene-CCO47_RS06900;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459551.1;locus_tag=CCO47_RS06900;partial=true;product=glycosyltransferase;pseudo=true;start_range=.,1449305;transl_table=11 NZ_CP075113.1 RefSeq gene 1449492 1449881 . - . ID=gene-CCO47_RS06905;Name=CCO47_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06905;old_locus_tag=CCO47_06905 NZ_CP075113.1 Protein Homology CDS 1449492 1449881 . - 0 ID=cds-WP_001576268.1;Parent=gene-CCO47_RS06905;Dbxref=GenBank:WP_001576268.1;Name=WP_001576268.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001696807.1;locus_tag=CCO47_RS06905;product=GtrA family protein;protein_id=WP_001576268.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1450202 1450826 . + . ID=gene-CCO47_RS06910;Name=CCO47_RS06910;end_range=1450826,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS06910;old_locus_tag=CCO47_06910;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 1450202 1450826 . + 0 ID=cds-CCO47_RS06910;Parent=gene-CCO47_RS06910;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1450826,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005054087.1;locus_tag=CCO47_RS06910;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1450974 1451048 . - . ID=gene-CCO47_RS06915;Name=CCO47_RS06915;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS06915;old_locus_tag=CCO47_06915 NZ_CP075113.1 tRNAscan-SE tRNA 1450974 1451048 . - . ID=rna-CCO47_RS06915;Parent=gene-CCO47_RS06915;anticodon=(pos:complement(1451013..1451015));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS06915;product=tRNA-Arg NZ_CP075113.1 tRNAscan-SE exon 1450974 1451048 . - . ID=exon-CCO47_RS06915-1;Parent=rna-CCO47_RS06915;anticodon=(pos:complement(1451013..1451015));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS06915;product=tRNA-Arg NZ_CP075113.1 RefSeq gene 1451124 1452065 . - . ID=gene-CCO47_RS06920;Name=CCO47_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06920;old_locus_tag=CCO47_06920 NZ_CP075113.1 Protein Homology CDS 1451124 1452065 . - 0 ID=cds-WP_000377779.1;Parent=gene-CCO47_RS06920;Dbxref=GenBank:WP_000377779.1;Name=WP_000377779.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461335.1;locus_tag=CCO47_RS06920;product=formate/nitrite transporter family protein;protein_id=WP_000377779.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1452354 1453109 . + . ID=gene-CCO47_RS06925;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=CCO47_RS06925;old_locus_tag=CCO47_06925 NZ_CP075113.1 Protein Homology CDS 1452354 1453109 . + 0 ID=cds-WP_000776787.1;Parent=gene-CCO47_RS06925;Dbxref=GenBank:WP_000776787.1;Name=WP_000776787.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461334.1;locus_tag=CCO47_RS06925;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776787.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1453170 1454477 . - . ID=gene-CCO47_RS06930;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=CCO47_RS06930;old_locus_tag=CCO47_06930 NZ_CP075113.1 Protein Homology CDS 1453170 1454477 . - 0 ID=cds-WP_001518618.1;Parent=gene-CCO47_RS06930;Dbxref=GenBank:WP_001518618.1;Name=WP_001518618.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=CCO47_RS06930;product=long-chain fatty acid transporter FadL;protein_id=WP_001518618.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1454849 1455133 . + . ID=gene-CCO47_RS06935;Name=CCO47_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06935;old_locus_tag=CCO47_06935 NZ_CP075113.1 Protein Homology CDS 1454849 1455133 . + 0 ID=cds-WP_000030904.1;Parent=gene-CCO47_RS06935;Dbxref=GenBank:WP_000030904.1;Name=WP_000030904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=CCO47_RS06935;product=YfcZ/YiiS family protein;protein_id=WP_000030904.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1455312 1456622 . + . ID=gene-CCO47_RS06940;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=CCO47_RS06940;old_locus_tag=CCO47_06940 NZ_CP075113.1 Protein Homology CDS 1455312 1456622 . + 0 ID=cds-WP_001248128.1;Parent=gene-CCO47_RS06940;Dbxref=GenBank:WP_001248128.1;Name=WP_001248128.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461331.2;locus_tag=CCO47_RS06940;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_001248128.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1456622 1458769 . + . ID=gene-CCO47_RS06945;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=CCO47_RS06945;old_locus_tag=CCO47_06945 NZ_CP075113.1 Protein Homology CDS 1456622 1458769 . + 0 ID=cds-WP_000214143.1;Parent=gene-CCO47_RS06945;Dbxref=GenBank:WP_000214143.1;Name=WP_000214143.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=(3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=CCO47_RS06945;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_000214143.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1458978 1459463 . + . ID=gene-CCO47_RS06950;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=CCO47_RS06950;old_locus_tag=CCO47_06950 NZ_CP075113.1 Protein Homology CDS 1458978 1459463 . + 0 ID=cds-WP_001195800.1;Parent=gene-CCO47_RS06950;Dbxref=GenBank:WP_001195800.1;Name=WP_001195800.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=CCO47_RS06950;product=phosphohistidine phosphatase SixA;protein_id=WP_001195800.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1459563 1460114 . - . ID=gene-CCO47_RS06955;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=CCO47_RS06955;old_locus_tag=CCO47_06955 NZ_CP075113.1 Protein Homology CDS 1459563 1460114 . - 0 ID=cds-WP_000730794.1;Parent=gene-CCO47_RS06955;Dbxref=GenBank:WP_000730794.1;Name=WP_000730794.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461328.1;locus_tag=CCO47_RS06955;product=endonuclease SmrB;protein_id=WP_000730794.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1460280 1461212 . + . ID=gene-CCO47_RS06960;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=CCO47_RS06960;old_locus_tag=CCO47_06960 NZ_CP075113.1 Protein Homology CDS 1460280 1461212 . + 0 ID=cds-WP_001542329.1;Parent=gene-CCO47_RS06960;Dbxref=GenBank:WP_001542329.1;Name=WP_001542329.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=CCO47_RS06960;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001542329.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1461248 1462333 . + . ID=gene-CCO47_RS06965;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=CCO47_RS06965;old_locus_tag=CCO47_06965 NZ_CP075113.1 Protein Homology CDS 1461248 1462333 . + 0 ID=cds-WP_000918457.1;Parent=gene-CCO47_RS06965;Dbxref=GenBank:WP_000918457.1;Name=WP_000918457.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=CCO47_RS06965;product=chorismate synthase;protein_id=WP_000918457.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1462337 1463161 . + . ID=gene-CCO47_RS06970;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=CCO47_RS06970;old_locus_tag=CCO47_06970 NZ_CP075113.1 Protein Homology CDS 1462337 1463161 . + 0 ID=cds-WP_000750428.1;Parent=gene-CCO47_RS06970;Dbxref=GenBank:WP_000750428.1;Name=WP_000750428.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461325.1;locus_tag=CCO47_RS06970;product=penicillin-insensitive murein endopeptidase;protein_id=WP_000750428.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1463161 1463970 . + . ID=gene-CCO47_RS06975;Name=CCO47_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06975;old_locus_tag=CCO47_06975 NZ_CP075113.1 Protein Homology CDS 1463161 1463970 . + 0 ID=cds-WP_000368599.1;Parent=gene-CCO47_RS06975;Dbxref=GenBank:WP_000368599.1;Name=WP_000368599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461324.1;locus_tag=CCO47_RS06975;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000368599.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1463970 1464518 . + . ID=gene-CCO47_RS06980;Name=CCO47_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06980;old_locus_tag=CCO47_06980 NZ_CP075113.1 Protein Homology CDS 1463970 1464518 . + 0 ID=cds-WP_001066345.1;Parent=gene-CCO47_RS06980;Dbxref=GenBank:WP_001066345.1;Name=WP_001066345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=CCO47_RS06980;product=elongation factor P hydroxylase;protein_id=WP_001066345.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1464551 1464826 . + . ID=gene-CCO47_RS06985;Name=CCO47_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS06985;old_locus_tag=CCO47_06985 NZ_CP075113.1 Protein Homology CDS 1464551 1464826 . + 0 ID=cds-WP_000559749.1;Parent=gene-CCO47_RS06985;Dbxref=GenBank:WP_000559749.1;Name=WP_000559749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461322.1;locus_tag=CCO47_RS06985;product=YfcL family protein;protein_id=WP_000559749.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1464878 1466878 . - . ID=gene-CCO47_RS06990;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=CCO47_RS06990;old_locus_tag=CCO47_06990 NZ_CP075113.1 Protein Homology CDS 1464878 1466878 . - 0 ID=cds-WP_000816104.1;Parent=gene-CCO47_RS06990;Dbxref=GenBank:WP_000816104.1;Name=WP_000816104.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540542.1;locus_tag=CCO47_RS06990;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmC2/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC1;protein_id=WP_000816104.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1467038 1468252 . + . ID=gene-CCO47_RS06995;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=CCO47_RS06995;old_locus_tag=CCO47_06995 NZ_CP075113.1 Protein Homology CDS 1467038 1468252 . + 0 ID=cds-WP_000817161.1;Parent=gene-CCO47_RS06995;Dbxref=GenBank:WP_000817161.1;Name=WP_000817161.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461320.1;locus_tag=CCO47_RS06995;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817161.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1468350 1469006 . + . ID=gene-CCO47_RS07000;Name=CCO47_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07000;old_locus_tag=CCO47_07000 NZ_CP075113.1 Protein Homology CDS 1468350 1469006 . + 0 ID=cds-WP_001142903.1;Parent=gene-CCO47_RS07000;Dbxref=GenBank:WP_001142903.1;Name=WP_001142903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461319.1;locus_tag=CCO47_RS07000;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_001142903.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1469073 1469591 . - . ID=gene-CCO47_RS07005;Name=CCO47_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07005;old_locus_tag=CCO47_07005 NZ_CP075113.1 Protein Homology CDS 1469073 1469591 . - 0 ID=cds-WP_000847547.1;Parent=gene-CCO47_RS07005;Dbxref=GenBank:WP_000847547.1;Name=WP_000847547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461318.1;locus_tag=CCO47_RS07005;product=YqhG/Tai3 family protein;protein_id=WP_000847547.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1469591 1469959 . - . ID=gene-CCO47_RS07010;Name=CCO47_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07010;old_locus_tag=CCO47_07010 NZ_CP075113.1 Protein Homology CDS 1469591 1469959 . - 0 ID=cds-WP_000118258.1;Parent=gene-CCO47_RS07010;Dbxref=GenBank:WP_000118258.1;Name=WP_000118258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461317.1;locus_tag=CCO47_RS07010;product=NlpC/P60 family protein;protein_id=WP_000118258.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1470128 1470376 . - . ID=gene-CCO47_RS07015;Name=CCO47_RS07015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS07015;old_locus_tag=CCO47_07015;pseudo=true NZ_CP075113.1 Protein Homology CDS 1470128 1470376 . - 0 ID=cds-CCO47_RS07015;Parent=gene-CCO47_RS07015;Note=internal stop;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461316.1;locus_tag=CCO47_RS07015;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1470549 1470923 . + . ID=gene-CCO47_RS07020;Name=CCO47_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07020;old_locus_tag=CCO47_07020 NZ_CP075113.1 Protein Homology CDS 1470549 1470923 . + 0 ID=cds-WP_001051261.1;Parent=gene-CCO47_RS07020;Dbxref=GenBank:WP_001051261.1;Name=WP_001051261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461315.1;locus_tag=CCO47_RS07020;product=hypothetical protein;protein_id=WP_001051261.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1471103 1472281 . + . ID=gene-CCO47_RS07025;Name=CCO47_RS07025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS07025;old_locus_tag=CCO47_07025;pseudo=true NZ_CP075113.1 Protein Homology CDS 1471103 1472281 . + 0 ID=cds-CCO47_RS07025;Parent=gene-CCO47_RS07025;Note=internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461314.1;locus_tag=CCO47_RS07025;product=arabinose transporter;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1472278 1473279 . - . ID=gene-CCO47_RS07030;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=CCO47_RS07030;old_locus_tag=CCO47_07030 NZ_CP075113.1 Protein Homology CDS 1472278 1473279 . - 0 ID=cds-WP_000553397.1;Parent=gene-CCO47_RS07030;Dbxref=GenBank:WP_000553397.1;Name=WP_000553397.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461313.1;locus_tag=CCO47_RS07030;product=flagella biosynthesis regulator Flk;protein_id=WP_000553397.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1473383 1474519 . + . ID=gene-CCO47_RS07035;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=CCO47_RS07035;old_locus_tag=CCO47_07035 NZ_CP075113.1 Protein Homology CDS 1473383 1474519 . + 0 ID=cds-WP_000699176.1;Parent=gene-CCO47_RS07035;Dbxref=GenBank:WP_000699176.1;Name=WP_000699176.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461312.1;locus_tag=CCO47_RS07035;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_000699176.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1474587 1475600 . + . ID=gene-CCO47_RS07040;Name=CCO47_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07040;old_locus_tag=CCO47_07040 NZ_CP075113.1 Protein Homology CDS 1474587 1475600 . + 0 ID=cds-WP_001289141.1;Parent=gene-CCO47_RS07040;Dbxref=GenBank:WP_001289141.1;Name=WP_001289141.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461311.1;locus_tag=CCO47_RS07040;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_001289141.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1475600 1476412 . + . ID=gene-CCO47_RS07045;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=CCO47_RS07045;old_locus_tag=CCO47_07045 NZ_CP075113.1 Protein Homology CDS 1475600 1476412 . + 0 ID=cds-WP_000016631.1;Parent=gene-CCO47_RS07045;Dbxref=GenBank:WP_000016631.1;Name=WP_000016631.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461310.1;locus_tag=CCO47_RS07045;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_000016631.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1476461 1477120 . + . ID=gene-CCO47_RS07050;Name=CCO47_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07050;old_locus_tag=CCO47_07050 NZ_CP075113.1 Protein Homology CDS 1476461 1477120 . + 0 ID=cds-WP_000364318.1;Parent=gene-CCO47_RS07050;Dbxref=GenBank:WP_000364318.1;Name=WP_000364318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461309.1;locus_tag=CCO47_RS07050;product=DedA family protein;protein_id=WP_000364318.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1477270 1478184 . + . ID=gene-CCO47_RS07055;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=CCO47_RS07055;old_locus_tag=CCO47_07055 NZ_CP075113.1 Protein Homology CDS 1477270 1478184 . + 0 ID=cds-WP_000118383.1;Parent=gene-CCO47_RS07055;Dbxref=GenBank:WP_000118383.1;Name=WP_000118383.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461308.1;locus_tag=CCO47_RS07055;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_000118383.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1478252 1479520 . + . ID=gene-CCO47_RS07060;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=CCO47_RS07060;old_locus_tag=CCO47_07060 NZ_CP075113.1 Protein Homology CDS 1478252 1479520 . + 0 ID=cds-WP_000792281.1;Parent=gene-CCO47_RS07060;Dbxref=GenBank:WP_000792281.1;Name=WP_000792281.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=CCO47_RS07060;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_000792281.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1479510 1480184 . + . ID=gene-CCO47_RS07065;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=CCO47_RS07065;old_locus_tag=CCO47_07065 NZ_CP075113.1 Protein Homology CDS 1479510 1480184 . + 0 ID=cds-WP_000157035.1;Parent=gene-CCO47_RS07065;Dbxref=GenBank:WP_000157035.1;Name=WP_000157035.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=CCO47_RS07065;product=cell division protein DedD;protein_id=WP_000157035.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1480495 1480983 . + . ID=gene-CCO47_RS07070;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=CCO47_RS07070;old_locus_tag=CCO47_07070 NZ_CP075113.1 Protein Homology CDS 1480495 1480983 . + 0 ID=cds-WP_000262102.1;Parent=gene-CCO47_RS07070;Dbxref=GenBank:WP_000262102.1;Name=WP_000262102.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461305.1;locus_tag=CCO47_RS07070;product=colicin V production protein;protein_id=WP_000262102.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1481021 1482538 . + . ID=gene-CCO47_RS07075;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=CCO47_RS07075;old_locus_tag=CCO47_07075 NZ_CP075113.1 Protein Homology CDS 1481021 1482538 . + 0 ID=cds-WP_000334205.1;Parent=gene-CCO47_RS07075;Dbxref=GenBank:WP_000334205.1;Name=WP_000334205.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=CCO47_RS07075;product=amidophosphoribosyltransferase;protein_id=WP_000334205.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1482574 1484001 . - . ID=gene-CCO47_RS07080;Name=CCO47_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07080;old_locus_tag=CCO47_07080 NZ_CP075113.1 Protein Homology CDS 1482574 1484001 . - 0 ID=cds-WP_000168929.1;Parent=gene-CCO47_RS07080;Dbxref=GenBank:WP_000168929.1;Name=WP_000168929.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461303.1;locus_tag=CCO47_RS07080;product=sigma-54 interaction domain-containing protein;protein_id=WP_000168929.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1484212 1485609 . + . ID=gene-CCO47_RS07085;Name=dokD;gbkey=Gene;gene=dokD;gene_biotype=protein_coding;locus_tag=CCO47_RS07085;old_locus_tag=CCO47_07085 NZ_CP075113.1 Protein Homology CDS 1484212 1485609 . + 0 ID=cds-WP_000132307.1;Parent=gene-CCO47_RS07085;Dbxref=GenBank:WP_000132307.1;Name=WP_000132307.1;gbkey=CDS;gene=dokD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461302.1;locus_tag=CCO47_RS07085;product=ornithine/lysine decarboxylase DokD;protein_id=WP_000132307.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1485700 1487121 . + . ID=gene-CCO47_RS07090;Name=CCO47_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07090;old_locus_tag=CCO47_07090 NZ_CP075113.1 Protein Homology CDS 1485700 1487121 . + 0 ID=cds-WP_000072506.1;Parent=gene-CCO47_RS07090;Dbxref=GenBank:WP_000072506.1;Name=WP_000072506.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=CCO47_RS07090;product=APC family permease;protein_id=WP_000072506.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1487123 1488226 . + . ID=gene-CCO47_RS07095;Name=CCO47_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07095;old_locus_tag=CCO47_07095 NZ_CP075113.1 Protein Homology CDS 1487123 1488226 . + 0 ID=cds-WP_000281907.1;Parent=gene-CCO47_RS07095;Dbxref=GenBank:WP_000281907.1;Name=WP_000281907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461300.1;locus_tag=CCO47_RS07095;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=WP_000281907.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1488290 1489696 . + . ID=gene-CCO47_RS07100;Name=CCO47_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07100;old_locus_tag=CCO47_07100 NZ_CP075113.1 Protein Homology CDS 1488290 1489696 . + 0 ID=cds-WP_000380353.1;Parent=gene-CCO47_RS07100;Dbxref=GenBank:WP_000380353.1;Name=WP_000380353.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461299.1;locus_tag=CCO47_RS07100;product=amino acid permease;protein_id=WP_000380353.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1489723 1490292 . + . ID=gene-CCO47_RS07105;Name=CCO47_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07105;old_locus_tag=CCO47_07105 NZ_CP075113.1 Protein Homology CDS 1489723 1490292 . + 0 ID=cds-WP_000825682.1;Parent=gene-CCO47_RS07105;Dbxref=GenBank:WP_000825682.1;Name=WP_000825682.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461298.1;locus_tag=CCO47_RS07105;product=UbiX family flavin prenyltransferase;protein_id=WP_000825682.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1490581 1491363 . + . ID=gene-CCO47_RS07110;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=CCO47_RS07110;old_locus_tag=CCO47_07110 NZ_CP075113.1 Protein Homology CDS 1490581 1491363 . + 0 ID=cds-WP_000754422.1;Parent=gene-CCO47_RS07110;Dbxref=GenBank:WP_000754422.1;Name=WP_000754422.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=CCO47_RS07110;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_000754422.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1491601 1492383 . + . ID=gene-CCO47_RS07115;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=CCO47_RS07115;old_locus_tag=CCO47_07115 NZ_CP075113.1 Protein Homology CDS 1491601 1492383 . + 0 ID=cds-WP_000731868.1;Parent=gene-CCO47_RS07115;Dbxref=GenBank:WP_000731868.1;Name=WP_000731868.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=CCO47_RS07115;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000731868.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1492566 1493252 . + . ID=gene-CCO47_RS07120;Name=CCO47_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07120;old_locus_tag=CCO47_07120 NZ_CP075113.1 Protein Homology CDS 1492566 1493252 . + 0 ID=cds-WP_000965498.1;Parent=gene-CCO47_RS07120;Dbxref=GenBank:WP_000965498.1;Name=WP_000965498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=CCO47_RS07120;product=histidine ABC transporter permease HisQ;protein_id=WP_000965498.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1493249 1493956 . + . ID=gene-CCO47_RS07125;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=CCO47_RS07125;old_locus_tag=CCO47_07125 NZ_CP075113.1 Protein Homology CDS 1493249 1493956 . + 0 ID=cds-WP_000569766.1;Parent=gene-CCO47_RS07125;Dbxref=GenBank:WP_000569766.1;Name=WP_000569766.1;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461294.1;locus_tag=CCO47_RS07125;product=histidine ABC transporter permease HisM;protein_id=WP_000569766.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1493970 1494743 . + . ID=gene-CCO47_RS07130;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=CCO47_RS07130;old_locus_tag=CCO47_07130 NZ_CP075113.1 Protein Homology CDS 1493970 1494743 . + 0 ID=cds-WP_001293591.1;Parent=gene-CCO47_RS07130;Dbxref=GenBank:WP_001293591.1;Name=WP_001293591.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=CCO47_RS07130;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_001293591.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1494795 1495688 . - . ID=gene-CCO47_RS07135;Name=CCO47_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07135;old_locus_tag=CCO47_07135 NZ_CP075113.1 Protein Homology CDS 1494795 1495688 . - 0 ID=cds-WP_001166268.1;Parent=gene-CCO47_RS07135;Dbxref=GenBank:WP_001166268.1;Name=WP_001166268.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461292.1;locus_tag=CCO47_RS07135;product=TIGR01777 family oxidoreductase;protein_id=WP_001166268.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1495814 1496461 . - . ID=gene-CCO47_RS07140;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=CCO47_RS07140;old_locus_tag=CCO47_07140 NZ_CP075113.1 Protein Homology CDS 1495814 1496461 . - 0 ID=cds-WP_000566563.1;Parent=gene-CCO47_RS07140;Dbxref=GenBank:WP_000566563.1;Name=WP_000566563.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461291.1;locus_tag=CCO47_RS07140;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_000566563.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1496604 1497248 . + . ID=gene-CCO47_RS07145;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=CCO47_RS07145;old_locus_tag=CCO47_07145 NZ_CP075113.1 Protein Homology CDS 1496604 1497248 . + 0 ID=cds-WP_000043010.1;Parent=gene-CCO47_RS07145;Dbxref=GenBank:WP_000043010.1;Name=WP_000043010.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461290.1;locus_tag=CCO47_RS07145;product=glutathione transferase;protein_id=WP_000043010.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1497304 1497855 . + . ID=gene-CCO47_RS07150;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=CCO47_RS07150;old_locus_tag=CCO47_07150 NZ_CP075113.1 Protein Homology CDS 1497304 1497855 . + 0 ID=cds-WP_000772458.1;Parent=gene-CCO47_RS07150;Dbxref=GenBank:WP_000772458.1;Name=WP_000772458.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461289.1;locus_tag=CCO47_RS07150;product=phosphodiesterase;protein_id=WP_000772458.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1497912 1498466 . + . ID=gene-CCO47_RS07155;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=CCO47_RS07155;old_locus_tag=CCO47_07155 NZ_CP075113.1 Protein Homology CDS 1497912 1498466 . + 0 ID=cds-WP_000230215.1;Parent=gene-CCO47_RS07155;Dbxref=GenBank:WP_000230215.1;Name=WP_000230215.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461288.1;locus_tag=CCO47_RS07155;product=NUDIX hydrolase YfcD;protein_id=WP_000230215.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1498472 1499491 . - . ID=gene-CCO47_RS07160;Name=CCO47_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07160;old_locus_tag=CCO47_07160 NZ_CP075113.1 Protein Homology CDS 1498472 1499491 . - 0 ID=cds-WP_000026949.1;Parent=gene-CCO47_RS07160;Dbxref=GenBank:WP_000026949.1;Name=WP_000026949.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=CCO47_RS07160;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000026949.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1499744 1500187 . + . ID=gene-CCO47_RS07165;Name=CCO47_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07165;old_locus_tag=CCO47_07165 NZ_CP075113.1 Protein Homology CDS 1499744 1500187 . + 0 ID=cds-WP_000901821.1;Parent=gene-CCO47_RS07165;Dbxref=GenBank:WP_000901821.1;Name=WP_000901821.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0034219,GO:0008982,GO:0016301,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461286.1;locus_tag=CCO47_RS07165;product=PTS sugar transporter subunit IIA;protein_id=WP_000901821.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1500268 1500540 . + . ID=gene-CCO47_RS07170;Name=CCO47_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07170;old_locus_tag=CCO47_07170 NZ_CP075113.1 Protein Homology CDS 1500268 1500540 . + 0 ID=cds-WP_000699818.1;Parent=gene-CCO47_RS07170;Dbxref=GenBank:WP_000699818.1;Name=WP_000699818.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461285.1;locus_tag=CCO47_RS07170;product=PTS sugar transporter subunit IIB;protein_id=WP_000699818.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1500561 1501952 . + . ID=gene-CCO47_RS07175;Name=CCO47_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07175;old_locus_tag=CCO47_07175 NZ_CP075113.1 Protein Homology CDS 1500561 1501952 . + 0 ID=cds-WP_001675787.1;Parent=gene-CCO47_RS07175;Dbxref=GenBank:WP_001675787.1;Name=WP_001675787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461284.3;locus_tag=CCO47_RS07175;product=PTS ascorbate transporter subunit IIC;protein_id=WP_001675787.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1501949 1502779 . + . ID=gene-CCO47_RS07180;Name=CCO47_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07180;old_locus_tag=CCO47_07180 NZ_CP075113.1 Protein Homology CDS 1501949 1502779 . + 0 ID=cds-WP_001103262.1;Parent=gene-CCO47_RS07180;Dbxref=GenBank:WP_001103262.1;Name=WP_001103262.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=CCO47_RS07180;product=transketolase;protein_id=WP_001103262.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1502772 1503725 . + . ID=gene-CCO47_RS07185;Name=CCO47_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07185;old_locus_tag=CCO47_07185 NZ_CP075113.1 Protein Homology CDS 1502772 1503725 . + 0 ID=cds-WP_000593035.1;Parent=gene-CCO47_RS07185;Dbxref=GenBank:WP_000593035.1;Name=WP_000593035.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=CCO47_RS07185;product=transketolase family protein;protein_id=WP_000593035.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1503774 1505294 . - . ID=gene-CCO47_RS07190;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=CCO47_RS07190;old_locus_tag=CCO47_07190 NZ_CP075113.1 Protein Homology CDS 1503774 1505294 . - 0 ID=cds-WP_094912408.1;Parent=gene-CCO47_RS07190;Dbxref=GenBank:WP_094912408.1;Name=WP_094912408.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461281.1;locus_tag=CCO47_RS07190;product=putative basic amino acid antiporter YfcC;protein_id=WP_094912408.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1505512 1507656 . - . ID=gene-CCO47_RS07195;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CCO47_RS07195;old_locus_tag=CCO47_07195 NZ_CP075113.1 Protein Homology CDS 1505512 1507656 . - 0 ID=cds-WP_000086692.1;Parent=gene-CCO47_RS07195;Dbxref=GenBank:WP_000086692.1;Name=WP_000086692.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461280.1;locus_tag=CCO47_RS07195;product=phosphate acetyltransferase;protein_id=WP_000086692.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1507733 1508935 . - . ID=gene-CCO47_RS07200;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=CCO47_RS07200;old_locus_tag=CCO47_07200 NZ_CP075113.1 Protein Homology CDS 1507733 1508935 . - 0 ID=cds-WP_000095689.1;Parent=gene-CCO47_RS07200;Dbxref=GenBank:WP_000095689.1;Name=WP_000095689.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=CCO47_RS07200;product=acetate kinase;protein_id=WP_000095689.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1509275 1509730 . + . ID=gene-CCO47_RS07205;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=CCO47_RS07205;old_locus_tag=CCO47_07205 NZ_CP075113.1 Protein Homology CDS 1509275 1509730 . + 0 ID=cds-WP_000106617.1;Parent=gene-CCO47_RS07205;Dbxref=GenBank:WP_000106617.1;Name=WP_000106617.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=CCO47_RS07205;product=terminus macrodomain insulation protein YfbV;protein_id=WP_000106617.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1509813 1510307 . + . ID=gene-CCO47_RS07210;Name=CCO47_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07210;old_locus_tag=CCO47_07210 NZ_CP075113.1 Protein Homology CDS 1509813 1510307 . + 0 ID=cds-WP_000426137.1;Parent=gene-CCO47_RS07210;Dbxref=GenBank:WP_000426137.1;Name=WP_000426137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=CCO47_RS07210;product=YfbU family protein;protein_id=WP_000426137.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1510300 1510977 . + . ID=gene-CCO47_RS07215;Name=CCO47_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07215;old_locus_tag=CCO47_07215 NZ_CP075113.1 Protein Homology CDS 1510300 1510977 . + 0 ID=cds-WP_001555201.1;Parent=gene-CCO47_RS07215;Dbxref=GenBank:WP_001555201.1;Name=WP_001555201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461276.3;locus_tag=CCO47_RS07215;product=sugar phosphatase;protein_id=WP_001555201.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1511054 1512880 . + . ID=gene-CCO47_RS07220;Name=CCO47_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07220;old_locus_tag=CCO47_07220 NZ_CP075113.1 Protein Homology CDS 1511054 1512880 . + 0 ID=cds-WP_094912411.1;Parent=gene-CCO47_RS07220;Dbxref=GenBank:WP_094912411.1;Name=WP_094912411.1;Ontology_term=GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=CCO47_RS07220;product=SLC13 family permease;protein_id=WP_094912411.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1512972 1513571 . - . ID=gene-CCO47_RS07225;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=CCO47_RS07225;old_locus_tag=CCO47_07225 NZ_CP075113.1 Protein Homology CDS 1512972 1513571 . - 0 ID=cds-WP_000813882.1;Parent=gene-CCO47_RS07225;Dbxref=GenBank:WP_000813882.1;Name=WP_000813882.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=CCO47_RS07225;product=5'-deoxynucleotidase;protein_id=WP_000813882.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1513665 1514879 . - . ID=gene-CCO47_RS07230;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=CCO47_RS07230;old_locus_tag=CCO47_07230 NZ_CP075113.1 Protein Homology CDS 1513665 1514879 . - 0 ID=cds-WP_000074540.1;Parent=gene-CCO47_RS07230;Dbxref=GenBank:WP_000074540.1;Name=WP_000074540.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=CCO47_RS07230;product=alanine transaminase AlaA;protein_id=WP_000074540.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1515829 1516767 . + . ID=gene-CCO47_RS07235;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=CCO47_RS07235;old_locus_tag=CCO47_07235 NZ_CP075113.1 Protein Homology CDS 1515829 1516767 . + 0 ID=cds-WP_000606288.1;Parent=gene-CCO47_RS07235;Dbxref=GenBank:WP_000606288.1;Name=WP_000606288.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461272.1;locus_tag=CCO47_RS07235;product=transcriptional regulator LrhA;protein_id=WP_000606288.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1516847 1516999 . + . ID=gene-CCO47_RS07240;Name=CCO47_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07240;old_locus_tag=CCO47_07240 NZ_CP075113.1 Protein Homology CDS 1516847 1516999 . + 0 ID=cds-WP_001522276.1;Parent=gene-CCO47_RS07240;Dbxref=GenBank:WP_001522276.1;Name=WP_001522276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=CCO47_RS07240;product=STM2329 family putative cytoplasmic protein;protein_id=WP_001522276.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1517394 1517837 . + . ID=gene-CCO47_RS07245;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=CCO47_RS07245;old_locus_tag=CCO47_07245 NZ_CP075113.1 Protein Homology CDS 1517394 1517837 . + 0 ID=cds-WP_000062993.1;Parent=gene-CCO47_RS07245;Dbxref=GenBank:WP_000062993.1;Name=WP_000062993.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461270.1;locus_tag=CCO47_RS07245;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_000062993.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1517853 1518515 . + . ID=gene-CCO47_RS07250;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=CCO47_RS07250;old_locus_tag=CCO47_07250 NZ_CP075113.1 Protein Homology CDS 1517853 1518515 . + 0 ID=cds-WP_000386728.1;Parent=gene-CCO47_RS07250;Dbxref=GenBank:WP_000386728.1;Name=WP_000386728.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461269.1;locus_tag=CCO47_RS07250;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386728.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1518602 1520404 . + . ID=gene-CCO47_RS07255;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=CCO47_RS07255;old_locus_tag=CCO47_07255 NZ_CP075113.1 Protein Homology CDS 1518602 1520404 . + 0 ID=cds-WP_000247855.1;Parent=gene-CCO47_RS07255;Dbxref=GenBank:WP_000247855.1;Name=WP_000247855.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461268.1;locus_tag=CCO47_RS07255;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_000247855.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1520407 1520907 . + . ID=gene-CCO47_RS07260;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=CCO47_RS07260;old_locus_tag=CCO47_07260 NZ_CP075113.1 Protein Homology CDS 1520407 1520907 . + 0 ID=cds-WP_000545038.1;Parent=gene-CCO47_RS07260;Dbxref=GenBank:WP_000545038.1;Name=WP_000545038.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461267.1;locus_tag=CCO47_RS07260;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_000545038.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1520904 1522241 . + . ID=gene-CCO47_RS07265;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=CCO47_RS07265;old_locus_tag=CCO47_07265 NZ_CP075113.1 Protein Homology CDS 1520904 1522241 . + 0 ID=cds-WP_000800048.1;Parent=gene-CCO47_RS07265;Dbxref=GenBank:WP_000800048.1;Name=WP_000800048.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=CCO47_RS07265;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_000800048.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1522272 1524998 . + . ID=gene-CCO47_RS07270;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=CCO47_RS07270;old_locus_tag=CCO47_07270 NZ_CP075113.1 Protein Homology CDS 1522272 1524998 . + 0 ID=cds-WP_001574710.1;Parent=gene-CCO47_RS07270;Dbxref=GenBank:WP_001574710.1;Name=WP_001574710.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=CCO47_RS07270;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_001574710.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1524995 1525972 . + . ID=gene-CCO47_RS07275;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=CCO47_RS07275;old_locus_tag=CCO47_07275 NZ_CP075113.1 Protein Homology CDS 1524995 1525972 . + 0 ID=cds-WP_000118515.1;Parent=gene-CCO47_RS07275;Dbxref=GenBank:WP_000118515.1;Name=WP_000118515.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=CCO47_RS07275;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_000118515.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1525987 1526529 . + . ID=gene-CCO47_RS07280;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=CCO47_RS07280;old_locus_tag=CCO47_07280 NZ_CP075113.1 Protein Homology CDS 1525987 1526529 . + 0 ID=cds-WP_000172746.1;Parent=gene-CCO47_RS07280;Dbxref=GenBank:WP_000172746.1;Name=WP_000172746.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=CCO47_RS07280;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172746.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1526540 1527094 . + . ID=gene-CCO47_RS07285;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=CCO47_RS07285;old_locus_tag=CCO47_07285 NZ_CP075113.1 Protein Homology CDS 1526540 1527094 . + 0 ID=cds-WP_000393524.1;Parent=gene-CCO47_RS07285;Dbxref=GenBank:WP_000393524.1;Name=WP_000393524.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461262.1;locus_tag=CCO47_RS07285;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_000393524.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1527091 1527393 . + . ID=gene-CCO47_RS07290;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=CCO47_RS07290;old_locus_tag=CCO47_07290 NZ_CP075113.1 Protein Homology CDS 1527091 1527393 . + 0 ID=cds-WP_000612687.1;Parent=gene-CCO47_RS07290;Dbxref=GenBank:WP_000612687.1;Name=WP_000612687.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=CCO47_RS07290;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612687.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1527390 1529231 . + . ID=gene-CCO47_RS07295;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=CCO47_RS07295;old_locus_tag=CCO47_07295 NZ_CP075113.1 Protein Homology CDS 1527390 1529231 . + 0 ID=cds-WP_001056577.1;Parent=gene-CCO47_RS07295;Dbxref=GenBank:WP_001056577.1;Name=WP_001056577.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=CCO47_RS07295;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_001056577.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1529545 1531074 . + . ID=gene-CCO47_RS07300;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=CCO47_RS07300;old_locus_tag=CCO47_07300 NZ_CP075113.1 Protein Homology CDS 1529545 1531074 . + 0 ID=cds-WP_000926428.1;Parent=gene-CCO47_RS07300;Dbxref=GenBank:WP_000926428.1;Name=WP_000926428.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=CCO47_RS07300;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_000926428.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1531081 1532538 . + . ID=gene-CCO47_RS07305;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=CCO47_RS07305;old_locus_tag=CCO47_07305 NZ_CP075113.1 Protein Homology CDS 1531081 1532538 . + 0 ID=cds-WP_000156675.1;Parent=gene-CCO47_RS07305;Dbxref=GenBank:WP_000156675.1;Name=WP_000156675.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=CCO47_RS07305;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_000156675.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1532800 1532907 . - . ID=gene-CCO47_RS07310;Name=CCO47_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07310;old_locus_tag=CCO47_07310 NZ_CP075113.1 Protein Homology CDS 1532800 1532907 . - 0 ID=cds-WP_001674899.1;Parent=gene-CCO47_RS07310;Dbxref=GenBank:WP_001674899.1;Name=WP_001674899.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020544.7;locus_tag=CCO47_RS07310;product=hypothetical protein;protein_id=WP_001674899.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1533427 1535208 . + . ID=gene-CCO47_RS07315;Name=CCO47_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07315;old_locus_tag=CCO47_07315 NZ_CP075113.1 Protein Homology CDS 1533427 1535208 . + 0 ID=cds-WP_000931748.1;Parent=gene-CCO47_RS07315;Dbxref=GenBank:WP_000931748.1;Name=WP_000931748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461257.1;locus_tag=CCO47_RS07315;product=vWA domain-containing protein;protein_id=WP_000931748.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1535249 1536250 . - . ID=gene-CCO47_RS07320;Name=CCO47_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07320;old_locus_tag=CCO47_07320 NZ_CP075113.1 Protein Homology CDS 1535249 1536250 . - 0 ID=cds-WP_094912415.1;Parent=gene-CCO47_RS07320;Dbxref=GenBank:WP_094912415.1;Name=WP_094912415.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461256.1;locus_tag=CCO47_RS07320;product=chemotaxis protein;protein_id=WP_094912415.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1536316 1537233 . - . ID=gene-CCO47_RS07325;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=CCO47_RS07325;old_locus_tag=CCO47_07325 NZ_CP075113.1 Protein Homology CDS 1536316 1537233 . - 0 ID=cds-WP_000419093.1;Parent=gene-CCO47_RS07325;Dbxref=GenBank:WP_000419093.1;Name=WP_000419093.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461255.1;locus_tag=CCO47_RS07325;product=ribonuclease BN;protein_id=WP_000419093.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1537294 1537755 . + . ID=gene-CCO47_RS07330;Name=CCO47_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07330;old_locus_tag=CCO47_07330 NZ_CP075113.1 Protein Homology CDS 1537294 1537755 . + 0 ID=cds-WP_000568155.1;Parent=gene-CCO47_RS07330;Dbxref=GenBank:WP_000568155.1;Name=WP_000568155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461254.1;locus_tag=CCO47_RS07330;product=GNAT family N-acetyltransferase;protein_id=WP_000568155.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1537810 1538115 . + . ID=gene-CCO47_RS07335;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=CCO47_RS07335;old_locus_tag=CCO47_07335 NZ_CP075113.1 Protein Homology CDS 1537810 1538115 . + 0 ID=cds-WP_001522308.1;Parent=gene-CCO47_RS07335;Dbxref=GenBank:WP_001522308.1;Name=WP_001522308.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=CCO47_RS07335;product=stress response protein ElaB;protein_id=WP_001522308.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1538216 1539511 . + . ID=gene-CCO47_RS07340;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=CCO47_RS07340;old_locus_tag=CCO47_07340 NZ_CP075113.1 Protein Homology CDS 1538216 1539511 . + 0 ID=cds-WP_000555673.1;Parent=gene-CCO47_RS07340;Dbxref=GenBank:WP_000555673.1;Name=WP_000555673.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461252.1;locus_tag=CCO47_RS07340;product=isochorismate synthase MenF;protein_id=WP_000555673.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1539597 1541267 . + . ID=gene-CCO47_RS07345;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=CCO47_RS07345;old_locus_tag=CCO47_07345 NZ_CP075113.1 Protein Homology CDS 1539597 1541267 . + 0 ID=cds-WP_000116384.1;Parent=gene-CCO47_RS07345;Dbxref=GenBank:WP_000116384.1;Name=WP_000116384.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461251.1;locus_tag=CCO47_RS07345;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_000116384.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1541264 1542022 . + . ID=gene-CCO47_RS07350;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=CCO47_RS07350;old_locus_tag=CCO47_07350 NZ_CP075113.1 Protein Homology CDS 1541264 1542022 . + 0 ID=cds-WP_000979152.1;Parent=gene-CCO47_RS07350;Dbxref=GenBank:WP_000979152.1;Name=WP_000979152.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=CCO47_RS07350;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_000979152.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1542037 1542894 . + . ID=gene-CCO47_RS07355;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=CCO47_RS07355;old_locus_tag=CCO47_07355 NZ_CP075113.1 Protein Homology CDS 1542037 1542894 . + 0 ID=cds-WP_000640013.1;Parent=gene-CCO47_RS07355;Dbxref=GenBank:WP_000640013.1;Name=WP_000640013.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=CCO47_RS07355;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000640013.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1542894 1543856 . + . ID=gene-CCO47_RS07360;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=CCO47_RS07360;old_locus_tag=CCO47_07360 NZ_CP075113.1 Protein Homology CDS 1542894 1543856 . + 0 ID=cds-WP_001255557.1;Parent=gene-CCO47_RS07360;Dbxref=GenBank:WP_001255557.1;Name=WP_001255557.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461248.1;locus_tag=CCO47_RS07360;product=o-succinylbenzoate synthase;protein_id=WP_001255557.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1543853 1545220 . + . ID=gene-CCO47_RS07365;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=CCO47_RS07365;old_locus_tag=CCO47_07365 NZ_CP075113.1 Protein Homology CDS 1543853 1545220 . + 0 ID=cds-WP_000144664.1;Parent=gene-CCO47_RS07365;Dbxref=GenBank:WP_000144664.1;Name=WP_000144664.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461247.1;locus_tag=CCO47_RS07365;product=o-succinylbenzoate--CoA ligase;protein_id=WP_000144664.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1545318 1545575 . + . ID=gene-CCO47_RS07370;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=CCO47_RS07370;old_locus_tag=CCO47_07370 NZ_CP075113.1 Protein Homology CDS 1545318 1545575 . + 0 ID=cds-WP_000455132.1;Parent=gene-CCO47_RS07370;Dbxref=GenBank:WP_000455132.1;Name=WP_000455132.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461246.1;locus_tag=CCO47_RS07370;product=signal transduction protein PmrD;protein_id=WP_000455132.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1545570 1545947 . - . ID=gene-CCO47_RS07375;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=CCO47_RS07375;old_locus_tag=CCO47_07375 NZ_CP075113.1 Protein Homology CDS 1545570 1545947 . - 0 ID=cds-WP_000538696.1;Parent=gene-CCO47_RS07375;Dbxref=GenBank:WP_000538696.1;Name=WP_000538696.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=CCO47_RS07375;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000538696.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1545947 1546282 . - . ID=gene-CCO47_RS07380;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=CCO47_RS07380;old_locus_tag=CCO47_07380 NZ_CP075113.1 Protein Homology CDS 1545947 1546282 . - 0 ID=cds-WP_000580579.1;Parent=gene-CCO47_RS07380;Dbxref=GenBank:WP_000580579.1;Name=WP_000580579.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461244.1;locus_tag=CCO47_RS07380;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000580579.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1546279 1547925 . - . ID=gene-CCO47_RS07385;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=CCO47_RS07385;old_locus_tag=CCO47_07385 NZ_CP075113.1 Protein Homology CDS 1546279 1547925 . - 0 ID=cds-WP_000978052.1;Parent=gene-CCO47_RS07385;Dbxref=GenBank:WP_000978052.1;Name=WP_000978052.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461243.1;locus_tag=CCO47_RS07385;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_000978052.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1547922 1548821 . - . ID=gene-CCO47_RS07390;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=CCO47_RS07390;old_locus_tag=CCO47_07390 NZ_CP075113.1 Protein Homology CDS 1547922 1548821 . - 0 ID=cds-WP_000169766.1;Parent=gene-CCO47_RS07390;Dbxref=GenBank:WP_000169766.1;Name=WP_000169766.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461242.1;locus_tag=CCO47_RS07390;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_000169766.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1548818 1550800 . - . ID=gene-CCO47_RS07395;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=CCO47_RS07395;old_locus_tag=CCO47_07395 NZ_CP075113.1 Protein Homology CDS 1548818 1550800 . - 0 ID=cds-WP_000648758.1;Parent=gene-CCO47_RS07395;Dbxref=GenBank:WP_000648758.1;Name=WP_000648758.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461241.1;locus_tag=CCO47_RS07395;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_000648758.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1550797 1551780 . - . ID=gene-CCO47_RS07400;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=CCO47_RS07400;old_locus_tag=CCO47_07400 NZ_CP075113.1 Protein Homology CDS 1550797 1551780 . - 0 ID=cds-WP_000458887.1;Parent=gene-CCO47_RS07400;Dbxref=GenBank:WP_000458887.1;Name=WP_000458887.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461240.1;locus_tag=CCO47_RS07400;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_000458887.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1551783 1552922 . - . ID=gene-CCO47_RS07405;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=CCO47_RS07405;old_locus_tag=CCO47_07405 NZ_CP075113.1 Protein Homology CDS 1551783 1552922 . - 0 ID=cds-WP_001279290.1;Parent=gene-CCO47_RS07405;Dbxref=GenBank:WP_001279290.1;Name=WP_001279290.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=CCO47_RS07405;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_001279290.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1553221 1553826 . + . ID=gene-CCO47_RS07410;Name=pmrG;gbkey=Gene;gene=pmrG;gene_biotype=protein_coding;locus_tag=CCO47_RS07410;old_locus_tag=CCO47_07410 NZ_CP075113.1 Protein Homology CDS 1553221 1553826 . + 0 ID=cds-WP_000879248.1;Parent=gene-CCO47_RS07410;Dbxref=GenBank:WP_000879248.1;Name=WP_000879248.1;gbkey=CDS;gene=pmrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=CCO47_RS07410;product=lipopolysaccharide core heptose(II)-phosphate phosphatase PmrG;protein_id=WP_000879248.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1553871 1554296 . - . ID=gene-CCO47_RS07415;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=CCO47_RS07415;old_locus_tag=CCO47_07415 NZ_CP075113.1 Protein Homology CDS 1553871 1554296 . - 0 ID=cds-WP_001249900.1;Parent=gene-CCO47_RS07415;Dbxref=GenBank:WP_001249900.1;Name=WP_001249900.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461237.1;locus_tag=CCO47_RS07415;product=nucleoside triphosphatase NudI;protein_id=WP_001249900.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1554575 1555117 . + . ID=gene-CCO47_RS07420;Name=CCO47_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07420;old_locus_tag=CCO47_07420 NZ_CP075113.1 Protein Homology CDS 1554575 1555117 . + 0 ID=cds-WP_024132400.1;Parent=gene-CCO47_RS07420;Dbxref=GenBank:WP_024132400.1;Name=WP_024132400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311165.2;locus_tag=CCO47_RS07420;product=YfaZ family outer membrane protein;protein_id=WP_024132400.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1555232 1556428 . + . ID=gene-CCO47_RS07425;Name=CCO47_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07425;old_locus_tag=CCO47_07425 NZ_CP075113.1 Protein Homology CDS 1555232 1556428 . + 0 ID=cds-WP_000935685.1;Parent=gene-CCO47_RS07425;Dbxref=GenBank:WP_000935685.1;Name=WP_000935685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461235.1;locus_tag=CCO47_RS07425;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_000935685.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1556678 1557460 . + . ID=gene-CCO47_RS07430;Name=CCO47_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07430;old_locus_tag=CCO47_07430 NZ_CP075113.1 Protein Homology CDS 1556678 1557460 . + 0 ID=cds-WP_000894171.1;Parent=gene-CCO47_RS07430;Dbxref=GenBank:WP_000894171.1;Name=WP_000894171.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461234.1;locus_tag=CCO47_RS07430;product=IclR family transcriptional regulator;protein_id=WP_000894171.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1557474 1558679 . + . ID=gene-CCO47_RS07435;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=CCO47_RS07435;old_locus_tag=CCO47_07435 NZ_CP075113.1 Protein Homology CDS 1557474 1558679 . + 0 ID=cds-WP_001530644.1;Parent=gene-CCO47_RS07435;Dbxref=GenBank:WP_001530644.1;Name=WP_001530644.1;Ontology_term=GO:0050032;gbkey=CDS;gene=rhmD;go_function=L-rhamnonate dehydratase activity|0050032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=CCO47_RS07435;product=L-rhamnonate dehydratase;protein_id=WP_001530644.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1558735 1560024 . + . ID=gene-CCO47_RS07440;Name=CCO47_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07440;old_locus_tag=CCO47_07440 NZ_CP075113.1 Protein Homology CDS 1558735 1560024 . + 0 ID=cds-WP_000028935.1;Parent=gene-CCO47_RS07440;Dbxref=GenBank:WP_000028935.1;Name=WP_000028935.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461232.1;locus_tag=CCO47_RS07440;product=MFS transporter;protein_id=WP_000028935.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1560050 1560853 . + . ID=gene-CCO47_RS07445;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=CCO47_RS07445;old_locus_tag=CCO47_07445 NZ_CP075113.1 Protein Homology CDS 1560050 1560853 . + 0 ID=cds-WP_000992942.1;Parent=gene-CCO47_RS07445;Dbxref=GenBank:WP_000992942.1;Name=WP_000992942.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461231.1;locus_tag=CCO47_RS07445;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WP_000992942.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1560859 1561035 . + . ID=gene-CCO47_RS07450;Name=CCO47_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07450;old_locus_tag=CCO47_07450 NZ_CP075113.1 Protein Homology CDS 1560859 1561035 . + 0 ID=cds-WP_001112763.1;Parent=gene-CCO47_RS07450;Dbxref=GenBank:WP_001112763.1;Name=WP_001112763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461230.1;locus_tag=CCO47_RS07450;product=hypothetical protein;protein_id=WP_001112763.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1561145 1562167 . - . ID=gene-CCO47_RS07455;Name=sseL;gbkey=Gene;gene=sseL;gene_biotype=pseudogene;locus_tag=CCO47_RS07455;old_locus_tag=CCO47_07455;pseudo=true NZ_CP075113.1 Protein Homology CDS 1561145 1562167 . - 0 ID=cds-CCO47_RS07455;Parent=gene-CCO47_RS07455;Note=internal stop;gbkey=CDS;gene=sseL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017721.1;locus_tag=CCO47_RS07455;product=SPI-2 type III secretion system effector deubiquitinase SseL;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1562593 1563783 . - . ID=gene-CCO47_RS07460;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=CCO47_RS07460;old_locus_tag=CCO47_07460 NZ_CP075113.1 Protein Homology CDS 1562593 1563783 . - 0 ID=cds-WP_001285734.1;Parent=gene-CCO47_RS07460;Dbxref=GenBank:WP_001285734.1;Name=WP_001285734.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461228.1;locus_tag=CCO47_RS07460;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_001285734.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1563780 1565039 . - . ID=gene-CCO47_RS07465;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=CCO47_RS07465;old_locus_tag=CCO47_07465 NZ_CP075113.1 Protein Homology CDS 1563780 1565039 . - 0 ID=cds-WP_000667149.1;Parent=gene-CCO47_RS07465;Dbxref=GenBank:WP_000667149.1;Name=WP_000667149.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461227.1;locus_tag=CCO47_RS07465;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_000667149.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1565029 1566657 . - . ID=gene-CCO47_RS07470;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=CCO47_RS07470;old_locus_tag=CCO47_07470 NZ_CP075113.1 Protein Homology CDS 1565029 1566657 . - 0 ID=cds-WP_000857205.1;Parent=gene-CCO47_RS07470;Dbxref=GenBank:WP_000857205.1;Name=WP_000857205.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461226.1;locus_tag=CCO47_RS07470;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_000857205.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1566930 1568288 . + . ID=gene-CCO47_RS07475;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=CCO47_RS07475;old_locus_tag=CCO47_07475 NZ_CP075113.1 Protein Homology CDS 1566930 1568288 . + 0 ID=cds-WP_000948739.1;Parent=gene-CCO47_RS07475;Dbxref=GenBank:WP_000948739.1;Name=WP_000948739.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461225.1;locus_tag=CCO47_RS07475;product=glycerol-3-phosphate transporter;protein_id=WP_000948739.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1568293 1569363 . + . ID=gene-CCO47_RS07480;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=CCO47_RS07480;old_locus_tag=CCO47_07480 NZ_CP075113.1 Protein Homology CDS 1568293 1569363 . + 0 ID=cds-WP_001195117.1;Parent=gene-CCO47_RS07480;Dbxref=GenBank:WP_001195117.1;Name=WP_001195117.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461224.1;locus_tag=CCO47_RS07480;product=glycerophosphodiester phosphodiesterase;protein_id=WP_001195117.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1569479 1570357 . - . ID=gene-CCO47_RS07485;Name=CCO47_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07485;old_locus_tag=CCO47_07485 NZ_CP075113.1 Protein Homology CDS 1569479 1570357 . - 0 ID=cds-WP_000176719.1;Parent=gene-CCO47_RS07485;Dbxref=GenBank:WP_000176719.1;Name=WP_000176719.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=CCO47_RS07485;product=LysR family transcriptional regulator;protein_id=WP_000176719.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1570519 1571709 . + . ID=gene-CCO47_RS07490;Name=CCO47_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07490;old_locus_tag=CCO47_07490 NZ_CP075113.1 Protein Homology CDS 1570519 1571709 . + 0 ID=cds-WP_000660247.1;Parent=gene-CCO47_RS07490;Dbxref=GenBank:WP_000660247.1;Name=WP_000660247.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461222.1;locus_tag=CCO47_RS07490;product=MFS transporter;protein_id=WP_000660247.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1571711 1571965 . - . ID=gene-CCO47_RS07495;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=CCO47_RS07495;old_locus_tag=CCO47_07495 NZ_CP075113.1 Protein Homology CDS 1571711 1571965 . - 0 ID=cds-WP_000533921.1;Parent=gene-CCO47_RS07495;Dbxref=GenBank:WP_000533921.1;Name=WP_000533921.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461221.1;locus_tag=CCO47_RS07495;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000533921.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1571965 1573095 . - . ID=gene-CCO47_RS07500;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=CCO47_RS07500;old_locus_tag=CCO47_07500 NZ_CP075113.1 Protein Homology CDS 1571965 1573095 . - 0 ID=cds-WP_000332026.1;Parent=gene-CCO47_RS07500;Dbxref=GenBank:WP_000332026.1;Name=WP_000332026.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=CCO47_RS07500;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000332026.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1573208 1575493 . - . ID=gene-CCO47_RS07505;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=CCO47_RS07505;old_locus_tag=CCO47_07505 NZ_CP075113.1 Protein Homology CDS 1573208 1575493 . - 0 ID=cds-WP_001076508.1;Parent=gene-CCO47_RS07505;Dbxref=GenBank:WP_001076508.1;Name=WP_001076508.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=CCO47_RS07505;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001076508.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1575849 1576577 . - . ID=gene-CCO47_RS07510;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=CCO47_RS07510;old_locus_tag=CCO47_07510 NZ_CP075113.1 Protein Homology CDS 1575849 1576577 . - 0 ID=cds-WP_001091009.1;Parent=gene-CCO47_RS07510;Dbxref=GenBank:WP_001091009.1;Name=WP_001091009.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=CCO47_RS07510;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_001091009.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1576660 1577544 . - . ID=gene-CCO47_RS07515;Name=CCO47_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07515;old_locus_tag=CCO47_07515 NZ_CP075113.1 Protein Homology CDS 1576660 1577544 . - 0 ID=cds-WP_000944714.1;Parent=gene-CCO47_RS07515;Dbxref=GenBank:WP_000944714.1;Name=WP_000944714.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=CCO47_RS07515;product=GntR family transcriptional regulator;protein_id=WP_000944714.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1577594 1578919 . + . ID=gene-CCO47_RS07520;Name=CCO47_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07520;old_locus_tag=CCO47_07520 NZ_CP075113.1 Protein Homology CDS 1577594 1578919 . + 0 ID=cds-WP_000098072.1;Parent=gene-CCO47_RS07520;Dbxref=GenBank:WP_000098072.1;Name=WP_000098072.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=CCO47_RS07520;product=MFS transporter;protein_id=WP_000098072.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1578934 1580136 . + . ID=gene-CCO47_RS07525;Name=CCO47_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07525;old_locus_tag=CCO47_07525 NZ_CP075113.1 Protein Homology CDS 1578934 1580136 . + 0 ID=cds-WP_000705587.1;Parent=gene-CCO47_RS07525;Dbxref=GenBank:WP_000705587.1;Name=WP_000705587.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=CCO47_RS07525;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_000705587.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1580546 1583182 . + . ID=gene-CCO47_RS07530;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=CCO47_RS07530;old_locus_tag=CCO47_07530 NZ_CP075113.1 Protein Homology CDS 1580546 1583182 . + 0 ID=cds-WP_001281270.1;Parent=gene-CCO47_RS07530;Dbxref=GenBank:WP_001281270.1;Name=WP_001281270.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=CCO47_RS07530;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_001281270.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1583300 1586146 . + . ID=gene-CCO47_RS07535;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=CCO47_RS07535;old_locus_tag=CCO47_07535 NZ_CP075113.1 Protein Homology CDS 1583300 1586146 . + 0 ID=cds-WP_000876077.1;Parent=gene-CCO47_RS07535;Dbxref=GenBank:WP_000876077.1;Name=WP_000876077.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461213.1;locus_tag=CCO47_RS07535;product=two-component system sensor histidine kinase RcsC;protein_id=WP_000876077.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1586248 1586898 . - . ID=gene-CCO47_RS07540;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=CCO47_RS07540;old_locus_tag=CCO47_07540 NZ_CP075113.1 Protein Homology CDS 1586248 1586898 . - 0 ID=cds-WP_001061919.1;Parent=gene-CCO47_RS07540;Dbxref=GenBank:WP_001061919.1;Name=WP_001061919.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461212.1;locus_tag=CCO47_RS07540;product=response regulator transcription factor RcsB;protein_id=WP_001061919.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1586915 1589584 . - . ID=gene-CCO47_RS07545;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=CCO47_RS07545;old_locus_tag=CCO47_07545 NZ_CP075113.1 Protein Homology CDS 1586915 1589584 . - 0 ID=cds-WP_000083202.1;Parent=gene-CCO47_RS07545;Dbxref=GenBank:WP_000083202.1;Name=WP_000083202.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=CCO47_RS07545;product=phosphotransferase RcsD;protein_id=WP_000083202.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1590313 1591461 . + . ID=gene-CCO47_RS07550;Name=CCO47_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07550;old_locus_tag=CCO47_07550 NZ_CP075113.1 Protein Homology CDS 1590313 1591461 . + 0 ID=cds-WP_094912418.1;Parent=gene-CCO47_RS07550;Dbxref=GenBank:WP_094912418.1;Name=WP_094912418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461210.1;locus_tag=CCO47_RS07550;product=porin OmpC;protein_id=WP_094912418.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1591576 1592628 . + . ID=gene-CCO47_RS07555;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=CCO47_RS07555;old_locus_tag=CCO47_07555 NZ_CP075113.1 Protein Homology CDS 1591576 1592628 . + 0 ID=cds-WP_000784308.1;Parent=gene-CCO47_RS07555;Dbxref=GenBank:WP_000784308.1;Name=WP_000784308.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461209.1;locus_tag=CCO47_RS07555;product=FAD:protein FMN transferase ApbE;protein_id=WP_000784308.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1592709 1593770 . + . ID=gene-CCO47_RS07560;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=CCO47_RS07560;old_locus_tag=CCO47_07560 NZ_CP075113.1 Protein Homology CDS 1592709 1593770 . + 0 ID=cds-WP_000975965.1;Parent=gene-CCO47_RS07560;Dbxref=GenBank:WP_000975965.1;Name=WP_000975965.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461208.1;locus_tag=CCO47_RS07560;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_000975965.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1593773 1594423 . + . ID=gene-CCO47_RS07565;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=CCO47_RS07565;old_locus_tag=CCO47_07565 NZ_CP075113.1 Protein Homology CDS 1593773 1594423 . + 0 ID=cds-WP_000885000.1;Parent=gene-CCO47_RS07565;Dbxref=GenBank:WP_000885000.1;Name=WP_000885000.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461207.1;locus_tag=CCO47_RS07565;product=DNA oxidative demethylase AlkB;protein_id=WP_000885000.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1594499 1596142 . + . ID=gene-CCO47_RS07570;Name=CCO47_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07570;old_locus_tag=CCO47_07570 NZ_CP075113.1 Protein Homology CDS 1594499 1596142 . + 0 ID=cds-WP_000421574.1;Parent=gene-CCO47_RS07570;Dbxref=GenBank:WP_000421574.1;Name=WP_000421574.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=CCO47_RS07570;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_000421574.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1596342 1596836 . - . ID=gene-CCO47_RS07575;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=CCO47_RS07575;old_locus_tag=CCO47_07575 NZ_CP075113.1 Protein Homology CDS 1596342 1596836 . - 0 ID=cds-WP_001550295.1;Parent=gene-CCO47_RS07575;Dbxref=GenBank:WP_001550295.1;Name=WP_001550295.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461205.1;locus_tag=CCO47_RS07575;product=serine protease inhibitor ecotin;protein_id=WP_001550295.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1597250 1597741 . + . ID=gene-CCO47_RS07580;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=CCO47_RS07580;old_locus_tag=CCO47_07580 NZ_CP075113.1 Protein Homology CDS 1597250 1597741 . + 0 ID=cds-WP_000228064.1;Parent=gene-CCO47_RS07580;Dbxref=GenBank:WP_000228064.1;Name=WP_000228064.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461204.1;locus_tag=CCO47_RS07580;product=ferredoxin-type protein NapF;protein_id=WP_000228064.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1597731 1597994 . + . ID=gene-CCO47_RS07585;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=CCO47_RS07585;old_locus_tag=CCO47_07585 NZ_CP075113.1 Protein Homology CDS 1597731 1597994 . + 0 ID=cds-WP_001260058.1;Parent=gene-CCO47_RS07585;Dbxref=GenBank:WP_001260058.1;Name=WP_001260058.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461203.1;locus_tag=CCO47_RS07585;product=chaperone NapD;protein_id=WP_001260058.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1597991 1600477 . + . ID=gene-CCO47_RS07590;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=CCO47_RS07590;old_locus_tag=CCO47_07590 NZ_CP075113.1 Protein Homology CDS 1597991 1600477 . + 0 ID=cds-WP_000778101.1;Parent=gene-CCO47_RS07590;Dbxref=GenBank:WP_000778101.1;Name=WP_000778101.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461202.1;locus_tag=CCO47_RS07590;product=nitrate reductase catalytic subunit NapA;protein_id=WP_000778101.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1600484 1601179 . + . ID=gene-CCO47_RS07595;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=CCO47_RS07595;old_locus_tag=CCO47_07595 NZ_CP075113.1 Protein Homology CDS 1600484 1601179 . + 0 ID=cds-WP_000091677.1;Parent=gene-CCO47_RS07595;Dbxref=GenBank:WP_000091677.1;Name=WP_000091677.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461201.1;locus_tag=CCO47_RS07595;product=ferredoxin-type protein NapG;protein_id=WP_000091677.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1601166 1602035 . + . ID=gene-CCO47_RS07600;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=CCO47_RS07600;old_locus_tag=CCO47_07600 NZ_CP075113.1 Protein Homology CDS 1601166 1602035 . + 0 ID=cds-WP_000013533.1;Parent=gene-CCO47_RS07600;Dbxref=GenBank:WP_000013533.1;Name=WP_000013533.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461200.1;locus_tag=CCO47_RS07600;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_000013533.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1602151 1602600 . + . ID=gene-CCO47_RS07605;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=CCO47_RS07605;old_locus_tag=CCO47_07605 NZ_CP075113.1 Protein Homology CDS 1602151 1602600 . + 0 ID=cds-WP_000835182.1;Parent=gene-CCO47_RS07605;Dbxref=GenBank:WP_000835182.1;Name=WP_000835182.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461199.1;locus_tag=CCO47_RS07605;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835182.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1602610 1603212 . + . ID=gene-CCO47_RS07610;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=CCO47_RS07610;old_locus_tag=CCO47_07610 NZ_CP075113.1 Protein Homology CDS 1602610 1603212 . + 0 ID=cds-WP_000431778.1;Parent=gene-CCO47_RS07610;Dbxref=GenBank:WP_000431778.1;Name=WP_000431778.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461198.1;locus_tag=CCO47_RS07610;product=cytochrome c-type protein NapC;protein_id=WP_000431778.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1603233 1603850 . + . ID=gene-CCO47_RS07615;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=CCO47_RS07615;old_locus_tag=CCO47_07615 NZ_CP075113.1 Protein Homology CDS 1603233 1603850 . + 0 ID=cds-WP_000888535.1-2;Parent=gene-CCO47_RS07615;Dbxref=GenBank:WP_000888535.1;Name=WP_000888535.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461197.1;locus_tag=CCO47_RS07615;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_000888535.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1603847 1604506 . + . ID=gene-CCO47_RS07620;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=CCO47_RS07620;old_locus_tag=CCO47_07620 NZ_CP075113.1 Protein Homology CDS 1603847 1604506 . + 0 ID=cds-WP_000990039.1-2;Parent=gene-CCO47_RS07620;Dbxref=GenBank:WP_000990039.1;Name=WP_000990039.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=CCO47_RS07620;product=heme exporter protein CcmB;protein_id=WP_000990039.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1604558 1605295 . + . ID=gene-CCO47_RS07625;Name=CCO47_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07625;old_locus_tag=CCO47_07625 NZ_CP075113.1 Protein Homology CDS 1604558 1605295 . + 0 ID=cds-WP_000266005.1-2;Parent=gene-CCO47_RS07625;Dbxref=GenBank:WP_000266005.1;Name=WP_000266005.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=CCO47_RS07625;product=heme ABC transporter permease;protein_id=WP_000266005.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1605292 1605504 . + . ID=gene-CCO47_RS07630;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=CCO47_RS07630;old_locus_tag=CCO47_07630 NZ_CP075113.1 Protein Homology CDS 1605292 1605504 . + 0 ID=cds-WP_000074112.1-2;Parent=gene-CCO47_RS07630;Dbxref=GenBank:WP_000074112.1;Name=WP_000074112.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=CCO47_RS07630;product=heme exporter protein CcmD;protein_id=WP_000074112.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1605501 1606001 . + . ID=gene-CCO47_RS07635;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=CCO47_RS07635;old_locus_tag=CCO47_07635 NZ_CP075113.1 Protein Homology CDS 1605501 1606001 . + 0 ID=cds-WP_001053620.1-2;Parent=gene-CCO47_RS07635;Dbxref=GenBank:WP_001053620.1;Name=WP_001053620.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=CCO47_RS07635;product=cytochrome c maturation protein CcmE;protein_id=WP_001053620.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1605998 1607929 . + . ID=gene-CCO47_RS07640;Name=CCO47_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07640;old_locus_tag=CCO47_07640 NZ_CP075113.1 Protein Homology CDS 1605998 1607929 . + 0 ID=cds-WP_000982526.1-2;Parent=gene-CCO47_RS07640;Dbxref=GenBank:WP_000982526.1;Name=WP_000982526.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=CCO47_RS07640;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_000982526.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1607926 1608483 . + . ID=gene-CCO47_RS07645;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=CCO47_RS07645;old_locus_tag=CCO47_07645 NZ_CP075113.1 Protein Homology CDS 1607926 1608483 . + 0 ID=cds-WP_000828305.1-2;Parent=gene-CCO47_RS07645;Dbxref=GenBank:WP_000828305.1;Name=WP_000828305.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=CCO47_RS07645;product=thiol:disulfide interchange protein DsbE;protein_id=WP_000828305.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1608480 1609523 . + . ID=gene-CCO47_RS07650;Name=CCO47_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07650;old_locus_tag=CCO47_07650 NZ_CP075113.1 Protein Homology CDS 1608480 1609523 . + 0 ID=cds-WP_001238339.1-2;Parent=gene-CCO47_RS07650;Dbxref=GenBank:WP_001238339.1;Name=WP_001238339.1;Ontology_term=GO:0017004,GO:0015035,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=protein-disulfide reductase activity|0015035||IEA,metal ion binding|0046872||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=CCO47_RS07650;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_001238339.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1609567 1610214 . - . ID=gene-CCO47_RS07655;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=CCO47_RS07655;old_locus_tag=CCO47_07655 NZ_CP075113.1 Protein Homology CDS 1609567 1610214 . - 0 ID=cds-WP_001115497.1;Parent=gene-CCO47_RS07655;Dbxref=GenBank:WP_001115497.1;Name=WP_001115497.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461189.1;locus_tag=CCO47_RS07655;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001115497.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1610944 1611507 . + . ID=gene-CCO47_RS07660;Name=pagL;gbkey=Gene;gene=pagL;gene_biotype=protein_coding;locus_tag=CCO47_RS07660;old_locus_tag=CCO47_07660 NZ_CP075113.1 Protein Homology CDS 1610944 1611507 . + 0 ID=cds-WP_000281875.1;Parent=gene-CCO47_RS07660;Dbxref=GenBank:WP_000281875.1;Name=WP_000281875.1;gbkey=CDS;gene=pagL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461188.1;locus_tag=CCO47_RS07660;product=lipid A 3-O-deacylase PagL;protein_id=WP_000281875.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1611699 1611902 . - . ID=gene-CCO47_RS07665;Name=CCO47_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07665;old_locus_tag=CCO47_07665 NZ_CP075113.1 Protein Homology CDS 1611699 1611902 . - 0 ID=cds-WP_001653202.1;Parent=gene-CCO47_RS07665;Dbxref=GenBank:WP_001653202.1;Name=WP_001653202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461187.1;locus_tag=CCO47_RS07665;product=virulence protein MsgA;protein_id=WP_001653202.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1611931 1612089 . - . ID=gene-CCO47_RS24410;Name=CCO47_RS24410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24410;old_locus_tag=CCO47_07670 NZ_CP075113.1 GeneMarkS-2+ CDS 1611931 1612089 . - 0 ID=cds-WP_000340080.1;Parent=gene-CCO47_RS24410;Dbxref=GenBank:WP_000340080.1;Name=WP_000340080.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO47_RS24410;product=hypothetical protein;protein_id=WP_000340080.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1612049 1612753 . + . ID=gene-CCO47_RS24090;Name=CCO47_RS24090;end_range=1612753,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24090;old_locus_tag=CCO47_07675;partial=true;pseudo=true;start_range=.,1612049 NZ_CP075113.1 Protein Homology CDS 1612049 1612753 . + 0 ID=cds-CCO47_RS24090;Parent=gene-CCO47_RS24090;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1612753,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460024.1;locus_tag=CCO47_RS24090;partial=true;product=phage tail protein;pseudo=true;start_range=.,1612049;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1613080 1613412 . + . ID=gene-CCO47_RS07680;Name=CCO47_RS07680;end_range=1613412,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS07680;old_locus_tag=CCO47_07680;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 1613080 1613412 . + 0 ID=cds-CCO47_RS07680;Parent=gene-CCO47_RS07680;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1613412,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001179595.1;locus_tag=CCO47_RS07680;partial=true;product=tail fiber assembly protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1613666 1616032 . + . ID=gene-CCO47_RS07690;Name=sspH2;gbkey=Gene;gene=sspH2;gene_biotype=protein_coding;locus_tag=CCO47_RS07690;old_locus_tag=CCO47_07690 NZ_CP075113.1 Protein Homology CDS 1613666 1616032 . + 0 ID=cds-WP_001676053.1;Parent=gene-CCO47_RS07690;Dbxref=GenBank:WP_001676053.1;Name=WP_001676053.1;gbkey=CDS;gene=sspH2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461184.1;locus_tag=CCO47_RS07690;product=SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2;protein_id=WP_001676053.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1616120 1616342 . + . ID=gene-CCO47_RS07695;Name=CCO47_RS07695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS07695;old_locus_tag=CCO47_07695;partial=true;pseudo=true;start_range=.,1616120 NZ_CP075113.1 Protein Homology CDS 1616120 1616342 . + 0 ID=cds-CCO47_RS07695;Parent=gene-CCO47_RS07695;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=CCO47_RS07695;partial=true;product=DUF4113 domain-containing protein;pseudo=true;start_range=.,1616120;transl_table=11 NZ_CP075113.1 RefSeq gene 1616653 1616729 . - . ID=gene-CCO47_RS07700;Name=CCO47_RS07700;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS07700;old_locus_tag=CCO47_07700 NZ_CP075113.1 tRNAscan-SE tRNA 1616653 1616729 . - . ID=rna-CCO47_RS07700;Parent=gene-CCO47_RS07700;anticodon=(pos:complement(1616693..1616695));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS07700;product=tRNA-Pro NZ_CP075113.1 tRNAscan-SE exon 1616653 1616729 . - . ID=exon-CCO47_RS07700-1;Parent=rna-CCO47_RS07700;anticodon=(pos:complement(1616693..1616695));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS07700;product=tRNA-Pro NZ_CP075113.1 RefSeq gene 1616803 1618563 . - . ID=gene-CCO47_RS07705;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=CCO47_RS07705;old_locus_tag=CCO47_07705 NZ_CP075113.1 Protein Homology CDS 1616803 1618563 . - 0 ID=cds-WP_000256150.1;Parent=gene-CCO47_RS07705;Dbxref=GenBank:WP_000256150.1;Name=WP_000256150.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=CCO47_RS07705;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_000256150.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1618595 1618822 . - . ID=gene-CCO47_RS07710;Name=CCO47_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07710;old_locus_tag=CCO47_07710 NZ_CP075113.1 Protein Homology CDS 1618595 1618822 . - 0 ID=cds-WP_001135904.1;Parent=gene-CCO47_RS07710;Dbxref=GenBank:WP_001135904.1;Name=WP_001135904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461171.1;locus_tag=CCO47_RS07710;product=YejL family protein;protein_id=WP_001135904.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1619002 1620009 . + . ID=gene-CCO47_RS07715;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=CCO47_RS07715;old_locus_tag=CCO47_07715 NZ_CP075113.1 Protein Homology CDS 1619002 1620009 . + 0 ID=cds-WP_000050806.1;Parent=gene-CCO47_RS07715;Dbxref=GenBank:WP_000050806.1;Name=WP_000050806.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461170.1;locus_tag=CCO47_RS07715;product=nucleoid-associated protein YejK;protein_id=WP_000050806.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1620037 1620657 . + . ID=gene-CCO47_RS07720;Name=CCO47_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07720;old_locus_tag=CCO47_07720 NZ_CP075113.1 Protein Homology CDS 1620037 1620657 . + 0 ID=cds-WP_000033438.1;Parent=gene-CCO47_RS07720;Dbxref=GenBank:WP_000033438.1;Name=WP_000033438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461169.1;locus_tag=CCO47_RS07720;product=hypothetical protein;protein_id=WP_000033438.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1620766 1621050 . - . ID=gene-CCO47_RS07725;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=CCO47_RS07725;old_locus_tag=CCO47_07725 NZ_CP075113.1 Protein Homology CDS 1620766 1621050 . - 0 ID=cds-WP_000494192.1;Parent=gene-CCO47_RS07725;Dbxref=GenBank:WP_000494192.1;Name=WP_000494192.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=CCO47_RS07725;product=50S ribosomal protein L25;protein_id=WP_000494192.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1621175 1622935 . - . ID=gene-CCO47_RS07730;Name=radD;gbkey=Gene;gene=radD;gene_biotype=protein_coding;gene_synonym=yejH;locus_tag=CCO47_RS07730;old_locus_tag=CCO47_07730 NZ_CP075113.1 Protein Homology CDS 1621175 1622935 . - 0 ID=cds-WP_000578121.1;Parent=gene-CCO47_RS07730;Dbxref=GenBank:WP_000578121.1;Name=WP_000578121.1;Ontology_term=GO:0006281;gbkey=CDS;gene=radD;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461167.1;locus_tag=CCO47_RS07730;product=DNA repair helicase RadD;protein_id=WP_000578121.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1623087 1623782 . + . ID=gene-CCO47_RS07735;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=CCO47_RS07735;old_locus_tag=CCO47_07735 NZ_CP075113.1 Protein Homology CDS 1623087 1623782 . + 0 ID=cds-WP_001234836.1;Parent=gene-CCO47_RS07735;Dbxref=GenBank:WP_001234836.1;Name=WP_001234836.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461166.1;locus_tag=CCO47_RS07735;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234836.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1623810 1625000 . + . ID=gene-CCO47_RS07740;Name=CCO47_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07740;old_locus_tag=CCO47_07740 NZ_CP075113.1 Protein Homology CDS 1623810 1625000 . + 0 ID=cds-WP_000213347.1;Parent=gene-CCO47_RS07740;Dbxref=GenBank:WP_000213347.1;Name=WP_000213347.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461165.1;locus_tag=CCO47_RS07740;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_000213347.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1625391 1625735 . + . ID=gene-CCO47_RS07745;Name=CCO47_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07745;old_locus_tag=CCO47_07745 NZ_CP075113.1 Protein Homology CDS 1625391 1625735 . + 0 ID=cds-WP_001094639.1;Parent=gene-CCO47_RS07745;Dbxref=GenBank:WP_001094639.1;Name=WP_001094639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461164.1;locus_tag=CCO47_RS07745;product=YejG family protein;protein_id=WP_001094639.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1625739 1627328 . - . ID=gene-CCO47_RS07750;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=CCO47_RS07750;old_locus_tag=CCO47_07750 NZ_CP075113.1 Protein Homology CDS 1625739 1627328 . - 0 ID=cds-WP_001676055.1;Parent=gene-CCO47_RS07750;Dbxref=GenBank:WP_001676055.1;Name=WP_001676055.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461163.1;locus_tag=CCO47_RS07750;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_001676055.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1627330 1628355 . - . ID=gene-CCO47_RS07755;Name=CCO47_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07755;old_locus_tag=CCO47_07755 NZ_CP075113.1 Protein Homology CDS 1627330 1628355 . - 0 ID=cds-WP_001137747.1;Parent=gene-CCO47_RS07755;Dbxref=GenBank:WP_001137747.1;Name=WP_001137747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461162.1;locus_tag=CCO47_RS07755;product=ABC transporter permease;protein_id=WP_001137747.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1628355 1629449 . - . ID=gene-CCO47_RS07760;Name=CCO47_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07760;old_locus_tag=CCO47_07760 NZ_CP075113.1 Protein Homology CDS 1628355 1629449 . - 0 ID=cds-WP_000501619.1;Parent=gene-CCO47_RS07760;Dbxref=GenBank:WP_000501619.1;Name=WP_000501619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461161.1;locus_tag=CCO47_RS07760;product=microcin C ABC transporter permease YejB;protein_id=WP_000501619.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1629459 1631264 . - . ID=gene-CCO47_RS07765;Name=CCO47_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07765;old_locus_tag=CCO47_07765 NZ_CP075113.1 Protein Homology CDS 1629459 1631264 . - 0 ID=cds-WP_000561749.1;Parent=gene-CCO47_RS07765;Dbxref=GenBank:WP_000561749.1;Name=WP_000561749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461160.1;locus_tag=CCO47_RS07765;product=extracellular solute-binding protein;protein_id=WP_000561749.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1631371 1632927 . - . ID=gene-CCO47_RS07770;Name=CCO47_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07770;old_locus_tag=CCO47_07770 NZ_CP075113.1 Protein Homology CDS 1631371 1632927 . - 0 ID=cds-WP_000957751.1;Parent=gene-CCO47_RS07770;Dbxref=GenBank:WP_000957751.1;Name=WP_000957751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=CCO47_RS07770;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000957751.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1633301 1633873 . - . ID=gene-CCO47_RS07775;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=CCO47_RS07775;old_locus_tag=CCO47_07775 NZ_CP075113.1 Protein Homology CDS 1633301 1633873 . - 0 ID=cds-WP_000241015.1;Parent=gene-CCO47_RS07775;Dbxref=GenBank:WP_000241015.1;Name=WP_000241015.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461158.1;locus_tag=CCO47_RS07775;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241015.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1634287 1635006 . - . ID=gene-CCO47_RS07780;Name=CCO47_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07780;old_locus_tag=CCO47_07780 NZ_CP075113.1 Protein Homology CDS 1634287 1635006 . - 0 ID=cds-WP_000178093.1;Parent=gene-CCO47_RS07780;Dbxref=GenBank:WP_000178093.1;Name=WP_000178093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461157.1;locus_tag=CCO47_RS07780;product=phosphatase PAP2 family protein;protein_id=WP_000178093.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1635036 1636022 . - . ID=gene-CCO47_RS07785;Name=CCO47_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07785;old_locus_tag=CCO47_07785 NZ_CP075113.1 Protein Homology CDS 1635036 1636022 . - 0 ID=cds-WP_000169349.1;Parent=gene-CCO47_RS07785;Dbxref=GenBank:WP_000169349.1;Name=WP_000169349.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461156.1;locus_tag=CCO47_RS07785;product=CobW family GTP-binding protein;protein_id=WP_000169349.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1636235 1636807 . - . ID=gene-CCO47_RS07790;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=CCO47_RS07790;old_locus_tag=CCO47_07790 NZ_CP075113.1 Protein Homology CDS 1636235 1636807 . - 0 ID=cds-WP_001136822.1;Parent=gene-CCO47_RS07790;Dbxref=GenBank:WP_001136822.1;Name=WP_001136822.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=CCO47_RS07790;product=elongation factor P-like protein YeiP;protein_id=WP_001136822.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1637132 1637386 . + . ID=gene-CCO47_RS07795;Name=CCO47_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07795;old_locus_tag=CCO47_07795 NZ_CP075113.1 Protein Homology CDS 1637132 1637386 . + 0 ID=cds-WP_001675765.1;Parent=gene-CCO47_RS07795;Dbxref=GenBank:WP_001675765.1;Name=WP_001675765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675765.1;locus_tag=CCO47_RS07795;product=YkgJ family cysteine cluster protein;protein_id=WP_001675765.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1637774 1637896 . + . ID=gene-CCO47_RS07800;Name=CCO47_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07800;old_locus_tag=CCO47_07800 NZ_CP075113.1 Protein Homology CDS 1637774 1637896 . + 0 ID=cds-WP_001519564.1;Parent=gene-CCO47_RS07800;Dbxref=GenBank:WP_001519564.1;Name=WP_001519564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=CCO47_RS07800;product=membrane protein;protein_id=WP_001519564.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1637898 1638563 . + . ID=gene-CCO47_RS07805;Name=CCO47_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07805;old_locus_tag=CCO47_07805 NZ_CP075113.1 Protein Homology CDS 1637898 1638563 . + 0 ID=cds-WP_001213897.1;Parent=gene-CCO47_RS07805;Dbxref=GenBank:WP_001213897.1;Name=WP_001213897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461153.1;locus_tag=CCO47_RS07805;product=GNVR domain-containing protein;protein_id=WP_001213897.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1638627 1639808 . - . ID=gene-CCO47_RS07810;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=CCO47_RS07810;old_locus_tag=CCO47_07810 NZ_CP075113.1 Protein Homology CDS 1638627 1639808 . - 0 ID=cds-WP_000551934.1;Parent=gene-CCO47_RS07810;Dbxref=GenBank:WP_000551934.1;Name=WP_000551934.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461152.1;locus_tag=CCO47_RS07810;product=sugar efflux transporter SetB;protein_id=WP_000551934.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1640177 1641307 . + . ID=gene-CCO47_RS07815;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=CCO47_RS07815;old_locus_tag=CCO47_07815 NZ_CP075113.1 Protein Homology CDS 1640177 1641307 . + 0 ID=cds-WP_000487282.1;Parent=gene-CCO47_RS07815;Dbxref=GenBank:WP_000487282.1;Name=WP_000487282.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=CCO47_RS07815;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_000487282.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1641307 1642245 . + . ID=gene-CCO47_RS07820;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=CCO47_RS07820;old_locus_tag=CCO47_07820 NZ_CP075113.1 Protein Homology CDS 1641307 1642245 . + 0 ID=cds-WP_000091249.1;Parent=gene-CCO47_RS07820;Dbxref=GenBank:WP_000091249.1;Name=WP_000091249.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461150.1;locus_tag=CCO47_RS07820;product=1-phosphofructokinase;protein_id=WP_000091249.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1642262 1643950 . + . ID=gene-CCO47_RS07825;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=CCO47_RS07825;old_locus_tag=CCO47_07825 NZ_CP075113.1 Protein Homology CDS 1642262 1643950 . + 0 ID=cds-WP_000854395.1;Parent=gene-CCO47_RS07825;Dbxref=GenBank:WP_000854395.1;Name=WP_000854395.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=CCO47_RS07825;product=PTS fructose transporter subunit IIBC;protein_id=WP_000854395.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1644015 1644872 . - . ID=gene-CCO47_RS07830;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=CCO47_RS07830;old_locus_tag=CCO47_07830 NZ_CP075113.1 Protein Homology CDS 1644015 1644872 . - 0 ID=cds-WP_000873915.1;Parent=gene-CCO47_RS07830;Dbxref=GenBank:WP_000873915.1;Name=WP_000873915.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461148.1;locus_tag=CCO47_RS07830;product=deoxyribonuclease IV;protein_id=WP_000873915.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1644951 1646000 . - . ID=gene-CCO47_RS07835;Name=CCO47_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07835;old_locus_tag=CCO47_07835 NZ_CP075113.1 Protein Homology CDS 1644951 1646000 . - 0 ID=cds-WP_000137966.1;Parent=gene-CCO47_RS07835;Dbxref=GenBank:WP_000137966.1;Name=WP_000137966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461147.1;locus_tag=CCO47_RS07835;product=YeiH family protein;protein_id=WP_000137966.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1646121 1646984 . + . ID=gene-CCO47_RS07840;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=CCO47_RS07840;old_locus_tag=CCO47_07840 NZ_CP075113.1 Protein Homology CDS 1646121 1646984 . + 0 ID=cds-WP_000548316.1;Parent=gene-CCO47_RS07840;Dbxref=GenBank:WP_000548316.1;Name=WP_000548316.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461146.1;locus_tag=CCO47_RS07840;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_000548316.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1647174 1648643 . + . ID=gene-CCO47_RS07845;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=CCO47_RS07845;old_locus_tag=CCO47_07845 NZ_CP075113.1 Protein Homology CDS 1647174 1648643 . + 0 ID=cds-WP_000535000.1;Parent=gene-CCO47_RS07845;Dbxref=GenBank:WP_000535000.1;Name=WP_000535000.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461145.1;locus_tag=CCO47_RS07845;product=lysine-specific permease;protein_id=WP_000535000.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1648991 1650982 . + . ID=gene-CCO47_RS07850;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=CCO47_RS07850;old_locus_tag=CCO47_07850 NZ_CP075113.1 Protein Homology CDS 1648991 1650982 . + 0 ID=cds-WP_000488250.1;Parent=gene-CCO47_RS07850;Dbxref=GenBank:WP_000488250.1;Name=WP_000488250.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=CCO47_RS07850;product=catecholate siderophore receptor CirA;protein_id=WP_000488250.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1651026 1652348 . - . ID=gene-CCO47_RS07855;Name=CCO47_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07855;old_locus_tag=CCO47_07855 NZ_CP075113.1 Protein Homology CDS 1651026 1652348 . - 0 ID=cds-WP_000023807.1;Parent=gene-CCO47_RS07855;Dbxref=GenBank:WP_000023807.1;Name=WP_000023807.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=CCO47_RS07855;product=MFS transporter;protein_id=WP_000023807.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1652381 1653268 . - . ID=gene-CCO47_RS07860;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=CCO47_RS07860;old_locus_tag=CCO47_07860 NZ_CP075113.1 Protein Homology CDS 1652381 1653268 . - 0 ID=cds-WP_000022921.1;Parent=gene-CCO47_RS07860;Dbxref=GenBank:WP_000022921.1;Name=WP_000022921.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461142.1;locus_tag=CCO47_RS07860;product=phosphoserine phosphatase SerB;protein_id=WP_000022921.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1653485 1654852 . + . ID=gene-CCO47_RS07865;Name=CCO47_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07865;old_locus_tag=CCO47_07865 NZ_CP075113.1 Protein Homology CDS 1653485 1654852 . + 0 ID=cds-WP_001675764.1;Parent=gene-CCO47_RS07865;Dbxref=GenBank:WP_001675764.1;Name=WP_001675764.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461141.1;locus_tag=CCO47_RS07865;product=L-serine ammonia-lyase;protein_id=WP_001675764.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1654857 1655246 . + . ID=gene-CCO47_RS07870;Name=CCO47_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07870;old_locus_tag=CCO47_07870 NZ_CP075113.1 Protein Homology CDS 1654857 1655246 . + 0 ID=cds-WP_000876817.1;Parent=gene-CCO47_RS07870;Dbxref=GenBank:WP_000876817.1;Name=WP_000876817.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461140.1;locus_tag=CCO47_RS07870;product=helix-turn-helix domain-containing protein;protein_id=WP_000876817.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1655235 1656092 . - . ID=gene-CCO47_RS07875;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=CCO47_RS07875;old_locus_tag=CCO47_07875 NZ_CP075113.1 Protein Homology CDS 1655235 1656092 . - 0 ID=cds-WP_000425491.1;Parent=gene-CCO47_RS07875;Dbxref=GenBank:WP_000425491.1;Name=WP_000425491.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461139.2;locus_tag=CCO47_RS07875;product=S-formylglutathione hydrolase;protein_id=WP_000425491.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1656422 1657090 . + . ID=gene-CCO47_RS07880;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=CCO47_RS07880;old_locus_tag=CCO47_07880 NZ_CP075113.1 Protein Homology CDS 1656422 1657090 . + 0 ID=cds-WP_001139611.1;Parent=gene-CCO47_RS07880;Dbxref=GenBank:WP_001139611.1;Name=WP_001139611.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461138.1;locus_tag=CCO47_RS07880;product=GTP cyclohydrolase I FolE;protein_id=WP_001139611.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1657105 1658247 . + . ID=gene-CCO47_RS07885;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=CCO47_RS07885;old_locus_tag=CCO47_07885 NZ_CP075113.1 Protein Homology CDS 1657105 1658247 . + 0 ID=cds-WP_001619000.1;Parent=gene-CCO47_RS07885;Dbxref=GenBank:WP_001619000.1;Name=WP_001619000.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461137.1;locus_tag=CCO47_RS07885;product=DUF418 domain-containing protein YeiB;protein_id=WP_001619000.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1658397 1659419 . + . ID=gene-CCO47_RS07890;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=CCO47_RS07890;old_locus_tag=CCO47_07890 NZ_CP075113.1 Protein Homology CDS 1658397 1659419 . + 0 ID=cds-WP_000628631.1;Parent=gene-CCO47_RS07890;Dbxref=GenBank:WP_000628631.1;Name=WP_000628631.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461136.1;locus_tag=CCO47_RS07890;product=HTH-type transcriptional regulator GalS;protein_id=WP_000628631.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1659918 1660894 . + . ID=gene-CCO47_RS07895;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=pseudogene;locus_tag=CCO47_RS07895;old_locus_tag=CCO47_07895;pseudo=true NZ_CP075113.1 Protein Homology CDS 1659918 1660894 . + 0 ID=cds-CCO47_RS07895;Parent=gene-CCO47_RS07895;Note=frameshifted;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=CCO47_RS07895;product=galactose/glucose ABC transporter substrate-binding protein MglB;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1661028 1662548 . + . ID=gene-CCO47_RS07900;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=pseudogene;locus_tag=CCO47_RS07900;old_locus_tag=CCO47_07900;pseudo=true NZ_CP075113.1 Protein Homology CDS 1661028 1662548 . + 0 ID=cds-CCO47_RS07900;Parent=gene-CCO47_RS07900;Note=internal stop;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461134.1;locus_tag=CCO47_RS07900;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1662564 1663574 . + . ID=gene-CCO47_RS07905;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=CCO47_RS07905;old_locus_tag=CCO47_07905 NZ_CP075113.1 Protein Homology CDS 1662564 1663574 . + 0 ID=cds-WP_001275101.1;Parent=gene-CCO47_RS07905;Dbxref=GenBank:WP_001275101.1;Name=WP_001275101.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=CCO47_RS07905;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_001275101.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1663649 1664884 . - . ID=gene-CCO47_RS07910;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=CCO47_RS07910;old_locus_tag=CCO47_07910 NZ_CP075113.1 Protein Homology CDS 1663649 1664884 . - 0 ID=cds-WP_000956095.1;Parent=gene-CCO47_RS07910;Dbxref=GenBank:WP_000956095.1;Name=WP_000956095.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=CCO47_RS07910;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_000956095.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1664878 1666119 . - . ID=gene-CCO47_RS07915;Name=CCO47_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07915;old_locus_tag=CCO47_07915 NZ_CP075113.1 Protein Homology CDS 1664878 1666119 . - 0 ID=cds-WP_001136406.1;Parent=gene-CCO47_RS07915;Dbxref=GenBank:WP_001136406.1;Name=WP_001136406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461131.1;locus_tag=CCO47_RS07915;product=NAD(P)-dependent oxidoreductase;protein_id=WP_001136406.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1666324 1666569 . - . ID=gene-CCO47_RS07920;Name=CCO47_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07920;old_locus_tag=CCO47_07920 NZ_CP075113.1 Protein Homology CDS 1666324 1666569 . - 0 ID=cds-WP_000605187.1;Parent=gene-CCO47_RS07920;Dbxref=GenBank:WP_000605187.1;Name=WP_000605187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461130.1;locus_tag=CCO47_RS07920;product=DUF2542 family protein;protein_id=WP_000605187.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1666566 1667285 . - . ID=gene-CCO47_RS07925;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=CCO47_RS07925;old_locus_tag=CCO47_07925 NZ_CP075113.1 Protein Homology CDS 1666566 1667285 . - 0 ID=cds-WP_000920081.1;Parent=gene-CCO47_RS07925;Dbxref=GenBank:WP_000920081.1;Name=WP_000920081.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461129.1;locus_tag=CCO47_RS07925;product=outer membrane permeability protein SanA;protein_id=WP_000920081.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1667462 1668346 . - . ID=gene-CCO47_RS07930;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=CCO47_RS07930;old_locus_tag=CCO47_07930 NZ_CP075113.1 Protein Homology CDS 1667462 1668346 . - 0 ID=cds-WP_000553532.1;Parent=gene-CCO47_RS07930;Dbxref=GenBank:WP_000553532.1;Name=WP_000553532.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461128.1;locus_tag=CCO47_RS07930;product=cytidine deaminase;protein_id=WP_000553532.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1668500 1669195 . - . ID=gene-CCO47_RS07935;Name=CCO47_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07935;old_locus_tag=CCO47_07935 NZ_CP075113.1 Protein Homology CDS 1668500 1669195 . - 0 ID=cds-WP_000989298.1;Parent=gene-CCO47_RS07935;Dbxref=GenBank:WP_000989298.1;Name=WP_000989298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461127.1;locus_tag=CCO47_RS07935;product=CidB/LrgB family autolysis modulator;protein_id=WP_000989298.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1669192 1669590 . - . ID=gene-CCO47_RS07940;Name=CCO47_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07940;old_locus_tag=CCO47_07940 NZ_CP075113.1 Protein Homology CDS 1669192 1669590 . - 0 ID=cds-WP_000045719.1;Parent=gene-CCO47_RS07940;Dbxref=GenBank:WP_000045719.1;Name=WP_000045719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461126.1;locus_tag=CCO47_RS07940;product=CidA/LrgA family protein;protein_id=WP_000045719.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1669722 1670630 . - . ID=gene-CCO47_RS07945;Name=CCO47_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07945;old_locus_tag=CCO47_07945 NZ_CP075113.1 Protein Homology CDS 1669722 1670630 . - 0 ID=cds-WP_000024658.1;Parent=gene-CCO47_RS07945;Dbxref=GenBank:WP_000024658.1;Name=WP_000024658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461125.1;locus_tag=CCO47_RS07945;product=LysR substrate-binding domain-containing protein;protein_id=WP_000024658.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1670756 1672114 . + . ID=gene-CCO47_RS07950;Name=mhbT;gbkey=Gene;gene=mhbT;gene_biotype=protein_coding;locus_tag=CCO47_RS07950;old_locus_tag=CCO47_07950 NZ_CP075113.1 Protein Homology CDS 1670756 1672114 . + 0 ID=cds-WP_000194215.1;Parent=gene-CCO47_RS07950;Dbxref=GenBank:WP_000194215.1;Name=WP_000194215.1;gbkey=CDS;gene=mhbT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461124.1;locus_tag=CCO47_RS07950;product=3-hydroxybenzoate transporter MhbT;protein_id=WP_000194215.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1672126 1673163 . + . ID=gene-CCO47_RS07955;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=CCO47_RS07955;old_locus_tag=CCO47_07955 NZ_CP075113.1 Protein Homology CDS 1672126 1673163 . + 0 ID=cds-WP_001289853.1;Parent=gene-CCO47_RS07955;Dbxref=GenBank:WP_001289853.1;Name=WP_001289853.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=CCO47_RS07955;product=gentisate 1%2C2-dioxygenase;protein_id=WP_001289853.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1673179 1673880 . + . ID=gene-CCO47_RS07960;Name=CCO47_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07960;old_locus_tag=CCO47_07960 NZ_CP075113.1 Protein Homology CDS 1673179 1673880 . + 0 ID=cds-WP_000170621.1;Parent=gene-CCO47_RS07960;Dbxref=GenBank:WP_000170621.1;Name=WP_000170621.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461122.1;locus_tag=CCO47_RS07960;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000170621.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1673889 1674533 . + . ID=gene-CCO47_RS07965;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=CCO47_RS07965;old_locus_tag=CCO47_07965 NZ_CP075113.1 Protein Homology CDS 1673889 1674533 . + 0 ID=cds-WP_000781183.1;Parent=gene-CCO47_RS07965;Dbxref=GenBank:WP_000781183.1;Name=WP_000781183.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034,GO:0005737;gbkey=CDS;gene=maiA;go_component=cytoplasm|0005737||IEA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,L-tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=CCO47_RS07965;product=maleylacetoacetate isomerase;protein_id=WP_000781183.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1674548 1675741 . + . ID=gene-CCO47_RS07970;Name=CCO47_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07970;old_locus_tag=CCO47_07970 NZ_CP075113.1 Protein Homology CDS 1674548 1675741 . + 0 ID=cds-WP_000150106.1;Parent=gene-CCO47_RS07970;Dbxref=GenBank:WP_000150106.1;Name=WP_000150106.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=CCO47_RS07970;product=3-hydroxybenzoate 6-monooxygenase;protein_id=WP_000150106.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1675850 1676788 . + . ID=gene-CCO47_RS07975;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=CCO47_RS07975;old_locus_tag=CCO47_07975 NZ_CP075113.1 Protein Homology CDS 1675850 1676788 . + 0 ID=cds-WP_001264844.1;Parent=gene-CCO47_RS07975;Dbxref=GenBank:WP_001264844.1;Name=WP_001264844.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=CCO47_RS07975;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_001264844.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1676846 1676929 . - . ID=gene-CCO47_RS24415;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=CCO47_RS24415;old_locus_tag=CCO47_07980 NZ_CP075113.1 Protein Homology CDS 1676846 1676929 . - 0 ID=cds-WP_000698460.1;Parent=gene-CCO47_RS24415;Dbxref=GenBank:WP_000698460.1;Name=WP_000698460.1;gbkey=CDS;gene=yohP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791249.1;locus_tag=CCO47_RS24415;product=small membrane protein YohP;protein_id=WP_000698460.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1677247 1678683 . + . ID=gene-CCO47_RS07985;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=CCO47_RS07985;old_locus_tag=CCO47_07985 NZ_CP075113.1 Protein Homology CDS 1677247 1678683 . + 0 ID=cds-WP_001081453.1;Parent=gene-CCO47_RS07985;Dbxref=GenBank:WP_001081453.1;Name=WP_001081453.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461117.1;locus_tag=CCO47_RS07985;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_001081453.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1678749 1679510 . + . ID=gene-CCO47_RS07990;Name=CCO47_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07990;old_locus_tag=CCO47_07990 NZ_CP075113.1 Protein Homology CDS 1678749 1679510 . + 0 ID=cds-WP_000169606.1;Parent=gene-CCO47_RS07990;Dbxref=GenBank:WP_000169606.1;Name=WP_000169606.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461116.1;locus_tag=CCO47_RS07990;product=SDR family oxidoreductase;protein_id=WP_000169606.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1679559 1680128 . - . ID=gene-CCO47_RS07995;Name=CCO47_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS07995;old_locus_tag=CCO47_07995 NZ_CP075113.1 Protein Homology CDS 1679559 1680128 . - 0 ID=cds-WP_001523476.1;Parent=gene-CCO47_RS07995;Dbxref=GenBank:WP_001523476.1;Name=WP_001523476.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669449.1;locus_tag=CCO47_RS07995;product=DedA family protein;protein_id=WP_001523476.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1680287 1680874 . + . ID=gene-CCO47_RS08000;Name=CCO47_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08000;old_locus_tag=CCO47_08000 NZ_CP075113.1 Protein Homology CDS 1680287 1680874 . + 0 ID=cds-WP_001017055.1;Parent=gene-CCO47_RS08000;Dbxref=GenBank:WP_001017055.1;Name=WP_001017055.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461114.1;locus_tag=CCO47_RS08000;product=Yip1 family protein;protein_id=WP_001017055.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1681040 1681987 . + . ID=gene-CCO47_RS08005;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=CCO47_RS08005;old_locus_tag=CCO47_08005 NZ_CP075113.1 Protein Homology CDS 1681040 1681987 . + 0 ID=cds-WP_000911555.1;Parent=gene-CCO47_RS08005;Dbxref=GenBank:WP_000911555.1;Name=WP_000911555.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=CCO47_RS08005;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_000911555.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1682046 1683776 . - . ID=gene-CCO47_RS08010;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=CCO47_RS08010;old_locus_tag=CCO47_08010 NZ_CP075113.1 Protein Homology CDS 1682046 1683776 . - 0 ID=cds-WP_000095234.1;Parent=gene-CCO47_RS08010;Dbxref=GenBank:WP_000095234.1;Name=WP_000095234.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461112.1;locus_tag=CCO47_RS08010;product=D-lactate dehydrogenase;protein_id=WP_000095234.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1684043 1686340 . + . ID=gene-CCO47_RS08015;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=CCO47_RS08015;old_locus_tag=CCO47_08015 NZ_CP075113.1 Protein Homology CDS 1684043 1686340 . + 0 ID=cds-WP_000871552.1;Parent=gene-CCO47_RS08015;Dbxref=GenBank:WP_000871552.1;Name=WP_000871552.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461111.1;locus_tag=CCO47_RS08015;product=beta-glucosidase BglX;protein_id=WP_000871552.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1686521 1687438 . + . ID=gene-CCO47_RS08020;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=CCO47_RS08020;old_locus_tag=CCO47_08020 NZ_CP075113.1 Protein Homology CDS 1686521 1687438 . + 0 ID=cds-WP_000155869.1;Parent=gene-CCO47_RS08020;Dbxref=GenBank:WP_000155869.1;Name=WP_000155869.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461110.1;locus_tag=CCO47_RS08020;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_000155869.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1687442 1688611 . + . ID=gene-CCO47_RS08025;Name=CCO47_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08025;old_locus_tag=CCO47_08025 NZ_CP075113.1 Protein Homology CDS 1687442 1688611 . + 0 ID=cds-WP_001278100.1;Parent=gene-CCO47_RS08025;Dbxref=GenBank:WP_001278100.1;Name=WP_001278100.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461109.1;locus_tag=CCO47_RS08025;product=ABC transporter permease;protein_id=WP_001278100.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1688604 1689551 . + . ID=gene-CCO47_RS08030;Name=CCO47_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08030;old_locus_tag=CCO47_08030 NZ_CP075113.1 Protein Homology CDS 1688604 1689551 . + 0 ID=cds-WP_000569166.1;Parent=gene-CCO47_RS08030;Dbxref=GenBank:WP_000569166.1;Name=WP_000569166.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461108.1;locus_tag=CCO47_RS08030;product=ABC transporter ATP-binding protein;protein_id=WP_000569166.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1689535 1690266 . + . ID=gene-CCO47_RS08035;Name=CCO47_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08035;old_locus_tag=CCO47_08035 NZ_CP075113.1 Protein Homology CDS 1689535 1690266 . + 0 ID=cds-WP_000824854.1;Parent=gene-CCO47_RS08035;Dbxref=GenBank:WP_000824854.1;Name=WP_000824854.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461107.1;locus_tag=CCO47_RS08035;product=ABC transporter permease;protein_id=WP_000824854.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1690247 1690354 . - . ID=gene-CCO47_RS08040;Name=CCO47_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08040;old_locus_tag=CCO47_08040 NZ_CP075113.1 Protein Homology CDS 1690247 1690354 . - 0 ID=cds-WP_001261696.1;Parent=gene-CCO47_RS08040;Dbxref=GenBank:WP_001261696.1;Name=WP_001261696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461106.1;locus_tag=CCO47_RS08040;product=protein YohO;protein_id=WP_001261696.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1690414 1691145 . - . ID=gene-CCO47_RS08045;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=CCO47_RS08045;old_locus_tag=CCO47_08045 NZ_CP075113.1 Protein Homology CDS 1690414 1691145 . - 0 ID=cds-WP_001240419.1;Parent=gene-CCO47_RS08045;Dbxref=GenBank:WP_001240419.1;Name=WP_001240419.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461105.1;locus_tag=CCO47_RS08045;product=HTH-type transcriptional regulator MlrA;protein_id=WP_001240419.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1691368 1693053 . + . ID=gene-CCO47_RS08050;Name=CCO47_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08050;old_locus_tag=CCO47_08050 NZ_CP075113.1 Protein Homology CDS 1691368 1693053 . + 0 ID=cds-WP_000272846.1;Parent=gene-CCO47_RS08050;Dbxref=GenBank:WP_000272846.1;Name=WP_000272846.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=CCO47_RS08050;product=sensor histidine kinase;protein_id=WP_000272846.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1693050 1693769 . + . ID=gene-CCO47_RS08055;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=CCO47_RS08055;old_locus_tag=CCO47_08055 NZ_CP075113.1 Protein Homology CDS 1693050 1693769 . + 0 ID=cds-WP_000598637.1;Parent=gene-CCO47_RS08055;Dbxref=GenBank:WP_000598637.1;Name=WP_000598637.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=CCO47_RS08055;product=two-component system response regulator BtsR;protein_id=WP_000598637.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1693816 1694283 . + . ID=gene-CCO47_RS08060;Name=CCO47_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08060;old_locus_tag=CCO47_08060 NZ_CP075113.1 Protein Homology CDS 1693816 1694283 . + 0 ID=cds-WP_000950411.1;Parent=gene-CCO47_RS08060;Dbxref=GenBank:WP_000950411.1;Name=WP_000950411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461102.1;locus_tag=CCO47_RS08060;product=YehS family protein;protein_id=WP_000950411.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1694340 1694870 . - . ID=gene-CCO47_RS08065;Name=CCO47_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08065;old_locus_tag=CCO47_08065 NZ_CP075113.1 Protein Homology CDS 1694340 1694870 . - 0 ID=cds-WP_001197951.1;Parent=gene-CCO47_RS08065;Dbxref=GenBank:WP_001197951.1;Name=WP_001197951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461101.1;locus_tag=CCO47_RS08065;product=YehR family lipoprotein;protein_id=WP_001197951.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1695042 1695500 . - . ID=gene-CCO47_RS08070;Name=CCO47_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08070;old_locus_tag=CCO47_08070 NZ_CP075113.1 Protein Homology CDS 1695042 1695500 . - 0 ID=cds-WP_000703135.1;Parent=gene-CCO47_RS08070;Dbxref=GenBank:WP_000703135.1;Name=WP_000703135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461100.1;locus_tag=CCO47_RS08070;product=YehR family lipoprotein;protein_id=WP_000703135.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1695741 1697774 . - . ID=gene-CCO47_RS08075;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=CCO47_RS08075;old_locus_tag=CCO47_08075 NZ_CP075113.1 Protein Homology CDS 1695741 1697774 . - 0 ID=cds-WP_000195332.1;Parent=gene-CCO47_RS08075;Dbxref=GenBank:WP_000195332.1;Name=WP_000195332.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=CCO47_RS08075;product=methionine--tRNA ligase;protein_id=WP_000195332.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1697939 1699048 . + . ID=gene-CCO47_RS08080;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=CCO47_RS08080;old_locus_tag=CCO47_08080 NZ_CP075113.1 Protein Homology CDS 1697939 1699048 . + 0 ID=cds-WP_001005424.1;Parent=gene-CCO47_RS08080;Dbxref=GenBank:WP_001005424.1;Name=WP_001005424.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=CCO47_RS08080;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_001005424.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1699326 1699607 . + . ID=gene-CCO47_RS08085;Name=CCO47_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08085;old_locus_tag=CCO47_08085 NZ_CP075113.1 Protein Homology CDS 1699326 1699607 . + 0 ID=cds-WP_000760404.1;Parent=gene-CCO47_RS08085;Dbxref=GenBank:WP_000760404.1;Name=WP_000760404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461097.1;locus_tag=CCO47_RS08085;product=YehE family protein;protein_id=WP_000760404.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1699886 1700419 . + . ID=gene-CCO47_RS08090;Name=yehD;gbkey=Gene;gene=yehD;gene_biotype=protein_coding;locus_tag=CCO47_RS08090;old_locus_tag=CCO47_08090 NZ_CP075113.1 Protein Homology CDS 1699886 1700419 . + 0 ID=cds-WP_000830690.1;Parent=gene-CCO47_RS08090;Dbxref=GenBank:WP_000830690.1;Name=WP_000830690.1;gbkey=CDS;gene=yehD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830679.1;locus_tag=CCO47_RS08090;product=fimbrial protein YehD;protein_id=WP_000830690.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1700481 1701161 . + . ID=gene-CCO47_RS08095;Name=CCO47_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08095;old_locus_tag=CCO47_08095 NZ_CP075113.1 Protein Homology CDS 1700481 1701161 . + 0 ID=cds-WP_000871808.1;Parent=gene-CCO47_RS08095;Dbxref=GenBank:WP_000871808.1;Name=WP_000871808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000871810.1;locus_tag=CCO47_RS08095;product=fimbrial assembly chaperone;protein_id=WP_000871808.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1701190 1703676 . + . ID=gene-CCO47_RS08100;Name=CCO47_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08100;old_locus_tag=CCO47_08100 NZ_CP075113.1 Protein Homology CDS 1701190 1703676 . + 0 ID=cds-WP_000413359.1;Parent=gene-CCO47_RS08100;Dbxref=GenBank:WP_000413359.1;Name=WP_000413359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000413359.1;locus_tag=CCO47_RS08100;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_000413359.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1703692 1704713 . + . ID=gene-CCO47_RS08105;Name=CCO47_RS08105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS08105;old_locus_tag=CCO47_08105;pseudo=true NZ_CP075113.1 Protein Homology CDS 1703692 1704713 . + 0 ID=cds-CCO47_RS08105;Parent=gene-CCO47_RS08105;Note=frameshifted;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000825913.1;locus_tag=CCO47_RS08105;product=fimbrial protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1704757 1705071 . - . ID=gene-CCO47_RS08110;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=CCO47_RS08110;old_locus_tag=CCO47_08110 NZ_CP075113.1 Protein Homology CDS 1704757 1705071 . - 0 ID=cds-WP_000837534.1;Parent=gene-CCO47_RS08110;Dbxref=GenBank:WP_000837534.1;Name=WP_000837534.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461092.1;locus_tag=CCO47_RS08110;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_000837534.1;transl_table=11 NZ_CP075113.1 cmsearch riboswitch 1705353 1705449 . + . ID=id-NZ_CP075113.1:1705353..1705449;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CP075113.1 RefSeq gene 1705481 1706278 . + . ID=gene-CCO47_RS08115;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=CCO47_RS08115;old_locus_tag=CCO47_08115 NZ_CP075113.1 Protein Homology CDS 1705481 1706278 . + 0 ID=cds-WP_001182156.1;Parent=gene-CCO47_RS08115;Dbxref=GenBank:WP_001182156.1;Name=WP_001182156.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461091.1;locus_tag=CCO47_RS08115;product=hydroxyethylthiazole kinase;protein_id=WP_001182156.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1706265 1707065 . + . ID=gene-CCO47_RS08120;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=CCO47_RS08120;old_locus_tag=CCO47_08120 NZ_CP075113.1 Protein Homology CDS 1706265 1707065 . + 0 ID=cds-WP_001188955.1;Parent=gene-CCO47_RS08120;Dbxref=GenBank:WP_001188955.1;Name=WP_001188955.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461090.1;locus_tag=CCO47_RS08120;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_001188955.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1707101 1707847 . + . ID=gene-CCO47_RS08125;Name=CCO47_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08125;old_locus_tag=CCO47_08125 NZ_CP075113.1 Protein Homology CDS 1707101 1707847 . + 0 ID=cds-WP_000434062.1;Parent=gene-CCO47_RS08125;Dbxref=GenBank:WP_000434062.1;Name=WP_000434062.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461089.1;locus_tag=CCO47_RS08125;product=GntR family transcriptional regulator;protein_id=WP_000434062.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1707821 1708786 . - . ID=gene-CCO47_RS08130;Name=CCO47_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08130;old_locus_tag=CCO47_08130 NZ_CP075113.1 Protein Homology CDS 1707821 1708786 . - 0 ID=cds-WP_001012656.1;Parent=gene-CCO47_RS08130;Dbxref=GenBank:WP_001012656.1;Name=WP_001012656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461088.1;locus_tag=CCO47_RS08130;product=PfkB family carbohydrate kinase;protein_id=WP_001012656.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1708783 1709787 . - . ID=gene-CCO47_RS08135;Name=CCO47_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08135;old_locus_tag=CCO47_08135 NZ_CP075113.1 Protein Homology CDS 1708783 1709787 . - 0 ID=cds-WP_000642804.1;Parent=gene-CCO47_RS08135;Dbxref=GenBank:WP_000642804.1;Name=WP_000642804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461087.1;locus_tag=CCO47_RS08135;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000642804.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1709784 1711055 . - . ID=gene-CCO47_RS08140;Name=CCO47_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08140;old_locus_tag=CCO47_08140 NZ_CP075113.1 Protein Homology CDS 1709784 1711055 . - 0 ID=cds-WP_000858692.1;Parent=gene-CCO47_RS08140;Dbxref=GenBank:WP_000858692.1;Name=WP_000858692.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461086.1;locus_tag=CCO47_RS08140;product=nucleoside permease;protein_id=WP_000858692.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1711309 1712361 . + . ID=gene-CCO47_RS08145;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=CCO47_RS08145;old_locus_tag=CCO47_08145 NZ_CP075113.1 Protein Homology CDS 1711309 1712361 . + 0 ID=cds-WP_000129590.1;Parent=gene-CCO47_RS08145;Dbxref=GenBank:WP_000129590.1;Name=WP_000129590.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=CCO47_RS08145;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129590.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1712414 1713313 . - . ID=gene-CCO47_RS08150;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=CCO47_RS08150;old_locus_tag=CCO47_08150 NZ_CP075113.1 Protein Homology CDS 1712414 1713313 . - 0 ID=cds-WP_001273389.1;Parent=gene-CCO47_RS08150;Dbxref=GenBank:WP_001273389.1;Name=WP_001273389.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461084.1;locus_tag=CCO47_RS08150;product=lipid kinase YegS;protein_id=WP_001273389.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1713875 1714210 . + . ID=gene-CCO47_RS08155;Name=steD;gbkey=Gene;gene=steD;gene_biotype=protein_coding;locus_tag=CCO47_RS08155;old_locus_tag=CCO47_08155 NZ_CP075113.1 Protein Homology CDS 1713875 1714210 . + 0 ID=cds-WP_031617316.1;Parent=gene-CCO47_RS08155;Dbxref=GenBank:WP_031617316.1;Name=WP_031617316.1;gbkey=CDS;gene=steD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461083.1;locus_tag=CCO47_RS08155;product=type III secretion system effector SteD;protein_id=WP_031617316.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1714332 1714748 . + . ID=gene-CCO47_RS08160;Name=CCO47_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08160;old_locus_tag=CCO47_08160 NZ_CP075113.1 Protein Homology CDS 1714332 1714748 . + 0 ID=cds-WP_001540404.1;Parent=gene-CCO47_RS08160;Dbxref=GenBank:WP_001540404.1;Name=WP_001540404.1;Ontology_term=GO:0030254;gbkey=CDS;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461082.1;locus_tag=CCO47_RS08160;product=CesT family type III secretion system chaperone;protein_id=WP_001540404.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1714758 1714936 . - . ID=gene-CCO47_RS08165;Name=CCO47_RS08165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS08165;old_locus_tag=CCO47_08165;partial=true;pseudo=true;start_range=.,1714758 NZ_CP075113.1 Protein Homology CDS 1714758 1714936 . - 0 ID=cds-CCO47_RS08165;Parent=gene-CCO47_RS08165;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=CCO47_RS08165;partial=true;product=non-LEE encoded effector protein NleB;pseudo=true;start_range=.,1714758;transl_table=11 NZ_CP075113.1 RefSeq gene 1715388 1716749 . - . ID=gene-CCO47_RS08170;Name=trhP;gbkey=Gene;gene=trhP;gene_biotype=protein_coding;gene_synonym=yegQ;locus_tag=CCO47_RS08170;old_locus_tag=CCO47_08170 NZ_CP075113.1 Protein Homology CDS 1715388 1716749 . - 0 ID=cds-WP_001540403.1;Parent=gene-CCO47_RS08170;Dbxref=GenBank:WP_001540403.1;Name=WP_001540403.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhP;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461080.1;locus_tag=CCO47_RS08170;product=prephenate-dependent tRNA uridine(34) hydroxylase TrhP;protein_id=WP_001540403.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1716865 1718976 . - . ID=gene-CCO47_RS08175;Name=CCO47_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08175;old_locus_tag=CCO47_08175 NZ_CP075113.1 Protein Homology CDS 1716865 1718976 . - 0 ID=cds-WP_000434256.1;Parent=gene-CCO47_RS08175;Dbxref=GenBank:WP_000434256.1;Name=WP_000434256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=CCO47_RS08175;product=DUF4034 domain-containing protein;protein_id=WP_000434256.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1718987 1719703 . - . ID=gene-CCO47_RS08180;Name=CCO47_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08180;old_locus_tag=CCO47_08180 NZ_CP075113.1 Protein Homology CDS 1718987 1719703 . - 0 ID=cds-WP_000498587.1;Parent=gene-CCO47_RS08180;Dbxref=GenBank:WP_000498587.1;Name=WP_000498587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=CCO47_RS08180;product=DUF1266 domain-containing protein;protein_id=WP_000498587.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1719703 1720905 . - . ID=gene-CCO47_RS08185;Name=CCO47_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08185;old_locus_tag=CCO47_08185 NZ_CP075113.1 Protein Homology CDS 1719703 1720905 . - 0 ID=cds-WP_000141059.1;Parent=gene-CCO47_RS08185;Dbxref=GenBank:WP_000141059.1;Name=WP_000141059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141078.1;locus_tag=CCO47_RS08185;product=hypothetical protein;protein_id=WP_000141059.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1721174 1721896 . - . ID=gene-CCO47_RS08190;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=CCO47_RS08190;old_locus_tag=CCO47_08190 NZ_CP075113.1 Protein Homology CDS 1721174 1721896 . - 0 ID=cds-WP_000137854.1;Parent=gene-CCO47_RS08190;Dbxref=GenBank:WP_000137854.1;Name=WP_000137854.1;Ontology_term=GO:0000160,GO:2000142,GO:0003700;gbkey=CDS;gene=baeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=CCO47_RS08190;product=envelope stress response regulator BaeR;protein_id=WP_000137854.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1721893 1723296 . - . ID=gene-CCO47_RS08195;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=CCO47_RS08195;old_locus_tag=CCO47_08195 NZ_CP075113.1 Protein Homology CDS 1721893 1723296 . - 0 ID=cds-WP_000870077.1;Parent=gene-CCO47_RS08195;Dbxref=GenBank:WP_000870077.1;Name=WP_000870077.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461075.1;locus_tag=CCO47_RS08195;product=envelope stress sensor histidine kinase BaeS;protein_id=WP_000870077.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1723296 1724708 . - . ID=gene-CCO47_RS08200;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=CCO47_RS08200;old_locus_tag=CCO47_08200 NZ_CP075113.1 Protein Homology CDS 1723296 1724708 . - 0 ID=cds-WP_000137826.1;Parent=gene-CCO47_RS08200;Dbxref=GenBank:WP_000137826.1;Name=WP_000137826.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461074.1;locus_tag=CCO47_RS08200;product=MFS transporter;protein_id=WP_000137826.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1724705 1727785 . - . ID=gene-CCO47_RS08205;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=CCO47_RS08205;old_locus_tag=CCO47_08205 NZ_CP075113.1 Protein Homology CDS 1724705 1727785 . - 0 ID=cds-WP_001210077.1;Parent=gene-CCO47_RS08205;Dbxref=GenBank:WP_001210077.1;Name=WP_001210077.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=CCO47_RS08205;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_001210077.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1727786 1730908 . - . ID=gene-CCO47_RS08210;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=CCO47_RS08210;old_locus_tag=CCO47_08210 NZ_CP075113.1 Protein Homology CDS 1727786 1730908 . - 0 ID=cds-WP_001197783.1;Parent=gene-CCO47_RS08210;Dbxref=GenBank:WP_001197783.1;Name=WP_001197783.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=CCO47_RS08210;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_001197783.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1730908 1732149 . - . ID=gene-CCO47_RS08215;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=CCO47_RS08215;old_locus_tag=CCO47_08215 NZ_CP075113.1 Protein Homology CDS 1730908 1732149 . - 0 ID=cds-WP_000678829.1;Parent=gene-CCO47_RS08215;Dbxref=GenBank:WP_000678829.1;Name=WP_000678829.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461071.1;locus_tag=CCO47_RS08215;product=multidrug efflux RND transporter subunit MdtA;protein_id=WP_000678829.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1732432 1732491 . + . ID=gene-CCO47_RS08220;Name=ibsA;gbkey=Gene;gene=ibsA;gene_biotype=protein_coding;locus_tag=CCO47_RS08220;old_locus_tag=CCO47_08220 NZ_CP075113.1 Protein Homology CDS 1732432 1732491 . + 0 ID=cds-WP_001805500.1;Parent=gene-CCO47_RS08220;Dbxref=GenBank:WP_001805500.1;Name=WP_001805500.1;gbkey=CDS;gene=ibsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=CCO47_RS08220;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001805500.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1732590 1733942 . - . ID=gene-CCO47_RS08225;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=pseudogene;locus_tag=CCO47_RS08225;old_locus_tag=CCO47_08225;pseudo=true NZ_CP075113.1 Protein Homology CDS 1732590 1733942 . - 0 ID=cds-CCO47_RS08225;Parent=gene-CCO47_RS08225;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=CCO47_RS08225;product=molecular chaperone;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1734076 1734945 . + . ID=gene-CCO47_RS08230;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=CCO47_RS08230;old_locus_tag=CCO47_08230 NZ_CP075113.1 Protein Homology CDS 1734076 1734945 . + 0 ID=cds-WP_000494702.1;Parent=gene-CCO47_RS08230;Dbxref=GenBank:WP_000494702.1;Name=WP_000494702.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=CCO47_RS08230;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_000494702.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1734913 1737903 . - . ID=gene-CCO47_RS08235;Name=CCO47_RS08235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS08235;old_locus_tag=CCO47_08235;pseudo=true NZ_CP075113.1 Protein Homology CDS 1734913 1737903 . - 0 ID=cds-CCO47_RS08235;Parent=gene-CCO47_RS08235;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461068.1;locus_tag=CCO47_RS08235;product=MASE1 domain-containing protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1738234 1738875 . + . ID=gene-CCO47_RS08240;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=CCO47_RS08240;old_locus_tag=CCO47_08240 NZ_CP075113.1 Protein Homology CDS 1738234 1738875 . + 0 ID=cds-WP_000132082.1;Parent=gene-CCO47_RS08240;Dbxref=GenBank:WP_000132082.1;Name=WP_000132082.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=CCO47_RS08240;product=uridine kinase;protein_id=WP_000132082.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1738966 1739547 . + . ID=gene-CCO47_RS08245;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=CCO47_RS08245;old_locus_tag=CCO47_08245 NZ_CP075113.1 Protein Homology CDS 1738966 1739547 . + 0 ID=cds-WP_001234783.1;Parent=gene-CCO47_RS08245;Dbxref=GenBank:WP_001234783.1;Name=WP_001234783.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=CCO47_RS08245;product=dCTP deaminase;protein_id=WP_001234783.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1739586 1741442 . + . ID=gene-CCO47_RS08250;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=CCO47_RS08250;old_locus_tag=CCO47_08250 NZ_CP075113.1 Protein Homology CDS 1739586 1741442 . + 0 ID=cds-WP_001252273.1;Parent=gene-CCO47_RS08250;Dbxref=GenBank:WP_001252273.1;Name=WP_001252273.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=CCO47_RS08250;product=outer membrane assembly protein AsmA;protein_id=WP_001252273.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1741528 1743108 . - . ID=gene-CCO47_RS08255;Name=CCO47_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08255;old_locus_tag=CCO47_08255 NZ_CP075113.1 Protein Homology CDS 1741528 1743108 . - 0 ID=cds-WP_000454721.1;Parent=gene-CCO47_RS08255;Dbxref=GenBank:WP_000454721.1;Name=WP_000454721.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461064.1;locus_tag=CCO47_RS08255;product=TerC family protein;protein_id=WP_000454721.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1743783 1744922 . + . ID=gene-CCO47_RS08260;Name=CCO47_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08260;old_locus_tag=CCO47_08260 NZ_CP075113.1 Protein Homology CDS 1743783 1744922 . + 0 ID=cds-WP_000978076.1;Parent=gene-CCO47_RS08260;Dbxref=GenBank:WP_000978076.1;Name=WP_000978076.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=CCO47_RS08260;product=polysaccharide export protein;protein_id=WP_000978076.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1744928 1745377 . + . ID=gene-CCO47_RS08265;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=CCO47_RS08265;old_locus_tag=CCO47_08265 NZ_CP075113.1 Protein Homology CDS 1744928 1745377 . + 0 ID=cds-WP_000482226.1;Parent=gene-CCO47_RS08265;Dbxref=GenBank:WP_000482226.1;Name=WP_000482226.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=CCO47_RS08265;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_000482226.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1745374 1747533 . + . ID=gene-CCO47_RS08270;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=CCO47_RS08270;old_locus_tag=CCO47_08270 NZ_CP075113.1 Protein Homology CDS 1745374 1747533 . + 0 ID=cds-WP_000137220.1;Parent=gene-CCO47_RS08270;Dbxref=GenBank:WP_000137220.1;Name=WP_000137220.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=CCO47_RS08270;product=tyrosine-protein kinase Wzc;protein_id=WP_000137220.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1747620 1748462 . + . ID=gene-CCO47_RS08275;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=CCO47_RS08275;old_locus_tag=CCO47_08275 NZ_CP075113.1 Protein Homology CDS 1747620 1748462 . + 0 ID=cds-WP_000205695.1;Parent=gene-CCO47_RS08275;Dbxref=GenBank:WP_000205695.1;Name=WP_000205695.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=CCO47_RS08275;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_000205695.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1748465 1748953 . + . ID=gene-CCO47_RS08280;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=CCO47_RS08280;old_locus_tag=CCO47_08280 NZ_CP075113.1 Protein Homology CDS 1748465 1748953 . + 0 ID=cds-WP_000888724.1;Parent=gene-CCO47_RS08280;Dbxref=GenBank:WP_000888724.1;Name=WP_000888724.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461059.1;locus_tag=CCO47_RS08280;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_000888724.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1748950 1750167 . + . ID=gene-CCO47_RS08285;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=CCO47_RS08285;old_locus_tag=CCO47_08285 NZ_CP075113.1 Protein Homology CDS 1748950 1750167 . + 0 ID=cds-WP_001023844.1;Parent=gene-CCO47_RS08285;Dbxref=GenBank:WP_001023844.1;Name=WP_001023844.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461058.1;locus_tag=CCO47_RS08285;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_001023844.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1750142 1751356 . + . ID=gene-CCO47_RS08290;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=CCO47_RS08290;old_locus_tag=CCO47_08290 NZ_CP075113.1 Protein Homology CDS 1750142 1751356 . + 0 ID=cds-WP_000091392.1;Parent=gene-CCO47_RS08290;Dbxref=GenBank:WP_000091392.1;Name=WP_000091392.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461057.1;locus_tag=CCO47_RS08290;product=colanic acid polymerase WcaD;protein_id=WP_000091392.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1751369 1752115 . + . ID=gene-CCO47_RS08295;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=CCO47_RS08295;old_locus_tag=CCO47_08295 NZ_CP075113.1 Protein Homology CDS 1751369 1752115 . + 0 ID=cds-WP_000480132.1;Parent=gene-CCO47_RS08295;Dbxref=GenBank:WP_000480132.1;Name=WP_000480132.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461056.1;locus_tag=CCO47_RS08295;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_000480132.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1752131 1752685 . + . ID=gene-CCO47_RS08300;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=CCO47_RS08300;old_locus_tag=CCO47_08300 NZ_CP075113.1 Protein Homology CDS 1752131 1752685 . + 0 ID=cds-WP_001153607.1;Parent=gene-CCO47_RS08300;Dbxref=GenBank:WP_001153607.1;Name=WP_001153607.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=CCO47_RS08300;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_001153607.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1752709 1753830 . + . ID=gene-CCO47_RS08305;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=CCO47_RS08305;old_locus_tag=CCO47_08305 NZ_CP075113.1 Protein Homology CDS 1752709 1753830 . + 0 ID=cds-WP_000048160.1;Parent=gene-CCO47_RS08305;Dbxref=GenBank:WP_000048160.1;Name=WP_000048160.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=CCO47_RS08305;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_000048160.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1753833 1754798 . + . ID=gene-CCO47_RS08310;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=CCO47_RS08310;old_locus_tag=CCO47_08310 NZ_CP075113.1 Protein Homology CDS 1753833 1754798 . + 0 ID=cds-WP_001041686.1;Parent=gene-CCO47_RS08310;Dbxref=GenBank:WP_001041686.1;Name=WP_001041686.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461053.1;locus_tag=CCO47_RS08310;product=GDP-L-fucose synthase;protein_id=WP_001041686.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1754801 1755274 . + . ID=gene-CCO47_RS08315;Name=CCO47_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08315;old_locus_tag=CCO47_08315 NZ_CP075113.1 Protein Homology CDS 1754801 1755274 . + 0 ID=cds-WP_001574640.1;Parent=gene-CCO47_RS08315;Dbxref=GenBank:WP_001574640.1;Name=WP_001574640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526160.1;locus_tag=CCO47_RS08315;product=GDP-mannose mannosyl hydrolase;protein_id=WP_001574640.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1755271 1756494 . + . ID=gene-CCO47_RS08320;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=CCO47_RS08320;old_locus_tag=CCO47_08320 NZ_CP075113.1 Protein Homology CDS 1755271 1756494 . + 0 ID=cds-WP_000699632.1;Parent=gene-CCO47_RS08320;Dbxref=GenBank:WP_000699632.1;Name=WP_000699632.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461051.1;locus_tag=CCO47_RS08320;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WP_000699632.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1756491 1757933 . + . ID=gene-CCO47_RS08325;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=CCO47_RS08325;old_locus_tag=CCO47_08325 NZ_CP075113.1 Protein Homology CDS 1756491 1757933 . + 0 ID=cds-WP_000605948.1;Parent=gene-CCO47_RS08325;Dbxref=GenBank:WP_000605948.1;Name=WP_000605948.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461050.3;locus_tag=CCO47_RS08325;product=mannose-1-phosphate guanyltransferase;protein_id=WP_000605948.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1758044 1759414 . + . ID=gene-CCO47_RS08330;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=CCO47_RS08330;old_locus_tag=CCO47_08330 NZ_CP075113.1 Protein Homology CDS 1758044 1759414 . + 0 ID=cds-WP_000164207.1;Parent=gene-CCO47_RS08330;Dbxref=GenBank:WP_000164207.1;Name=WP_000164207.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=CCO47_RS08330;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WP_000164207.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1759468 1760862 . + . ID=gene-CCO47_RS08335;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=CCO47_RS08335;old_locus_tag=CCO47_08335 NZ_CP075113.1 Protein Homology CDS 1759468 1760862 . + 0 ID=cds-WP_000183158.1;Parent=gene-CCO47_RS08335;Dbxref=GenBank:WP_000183158.1;Name=WP_000183158.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=CCO47_RS08335;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_000183158.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1760964 1762442 . + . ID=gene-CCO47_RS08340;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=CCO47_RS08340;old_locus_tag=CCO47_08340 NZ_CP075113.1 Protein Homology CDS 1760964 1762442 . + 0 ID=cds-WP_000058677.1;Parent=gene-CCO47_RS08340;Dbxref=GenBank:WP_000058677.1;Name=WP_000058677.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=CCO47_RS08340;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WP_000058677.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1762464 1763744 . + . ID=gene-CCO47_RS08345;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=CCO47_RS08345;old_locus_tag=CCO47_08345 NZ_CP075113.1 Protein Homology CDS 1762464 1763744 . + 0 ID=cds-WP_000770911.1;Parent=gene-CCO47_RS08345;Dbxref=GenBank:WP_000770911.1;Name=WP_000770911.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=CCO47_RS08345;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_000770911.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1763741 1764961 . + . ID=gene-CCO47_RS08350;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=CCO47_RS08350;old_locus_tag=CCO47_08350 NZ_CP075113.1 Protein Homology CDS 1763741 1764961 . + 0 ID=cds-WP_000868513.1;Parent=gene-CCO47_RS08350;Dbxref=GenBank:WP_000868513.1;Name=WP_000868513.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=CCO47_RS08350;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_000868513.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1764972 1766375 . + . ID=gene-CCO47_RS08355;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=CCO47_RS08355;old_locus_tag=CCO47_08355 NZ_CP075113.1 Protein Homology CDS 1764972 1766375 . + 0 ID=cds-WP_001144951.1;Parent=gene-CCO47_RS08355;Dbxref=GenBank:WP_001144951.1;Name=WP_001144951.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=CCO47_RS08355;product=colanic acid biosynthesis protein WcaM;protein_id=WP_001144951.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1766553 1767446 . + . ID=gene-CCO47_RS08360;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=CCO47_RS08360;old_locus_tag=CCO47_08360 NZ_CP075113.1 Protein Homology CDS 1766553 1767446 . + 0 ID=cds-WP_000981469.1;Parent=gene-CCO47_RS08360;Dbxref=GenBank:WP_000981469.1;Name=WP_000981469.1;Ontology_term=GO:0006011,GO:0030234;gbkey=CDS;gene=galF;go_function=enzyme regulator activity|0030234||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461043.1;locus_tag=CCO47_RS08360;product=GalU regulator GalF;protein_id=WP_000981469.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1767823 1768908 . + . ID=gene-CCO47_RS08365;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=CCO47_RS08365;old_locus_tag=CCO47_08365 NZ_CP075113.1 Protein Homology CDS 1767823 1768908 . + 0 ID=cds-WP_000697846.1;Parent=gene-CCO47_RS08365;Dbxref=GenBank:WP_000697846.1;Name=WP_000697846.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461042.1;locus_tag=CCO47_RS08365;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_000697846.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1768908 1769807 . + . ID=gene-CCO47_RS08370;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=CCO47_RS08370;old_locus_tag=CCO47_08370 NZ_CP075113.1 Protein Homology CDS 1768908 1769807 . + 0 ID=cds-WP_001023658.1;Parent=gene-CCO47_RS08370;Dbxref=GenBank:WP_001023658.1;Name=WP_001023658.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461041.1;locus_tag=CCO47_RS08370;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_001023658.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1769855 1770733 . + . ID=gene-CCO47_RS08375;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=CCO47_RS08375;old_locus_tag=CCO47_08375 NZ_CP075113.1 Protein Homology CDS 1769855 1770733 . + 0 ID=cds-WP_000857535.1;Parent=gene-CCO47_RS08375;Dbxref=GenBank:WP_000857535.1;Name=WP_000857535.1;Ontology_term=GO:0000271,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461040.1;locus_tag=CCO47_RS08375;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_000857535.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1770734 1771285 . + . ID=gene-CCO47_RS08380;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=CCO47_RS08380;old_locus_tag=CCO47_08380 NZ_CP075113.1 Protein Homology CDS 1770734 1771285 . + 0 ID=cds-WP_000973709.1;Parent=gene-CCO47_RS08380;Dbxref=GenBank:WP_000973709.1;Name=WP_000973709.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461039.1;locus_tag=CCO47_RS08380;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_000973709.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1771291 1772284 . + . ID=gene-CCO47_RS08385;Name=CCO47_RS08385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS08385;old_locus_tag=CCO47_08385;pseudo=true NZ_CP075113.1 Protein Homology CDS 1771291 1772284 . + 0 ID=cds-CCO47_RS08385;Parent=gene-CCO47_RS08385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461038.1;locus_tag=CCO47_RS08385;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1772281 1773054 . + . ID=gene-CCO47_RS08390;Name=rfbF;gbkey=Gene;gene=rfbF;gene_biotype=protein_coding;locus_tag=CCO47_RS08390;old_locus_tag=CCO47_08390 NZ_CP075113.1 Protein Homology CDS 1772281 1773054 . + 0 ID=cds-WP_000648783.1;Parent=gene-CCO47_RS08390;Dbxref=GenBank:WP_000648783.1;Name=WP_000648783.1;Ontology_term=GO:0009243,GO:0047343;gbkey=CDS;gene=rfbF;go_function=glucose-1-phosphate cytidylyltransferase activity|0047343||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461037.1;locus_tag=CCO47_RS08390;product=glucose-1-phosphate cytidylyltransferase;protein_id=WP_000648783.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1773059 1774138 . + . ID=gene-CCO47_RS08395;Name=rfbG;gbkey=Gene;gene=rfbG;gene_biotype=protein_coding;locus_tag=CCO47_RS08395;old_locus_tag=CCO47_08395 NZ_CP075113.1 Protein Homology CDS 1773059 1774138 . + 0 ID=cds-WP_000565910.1;Parent=gene-CCO47_RS08395;Dbxref=GenBank:WP_000565910.1;Name=WP_000565910.1;Ontology_term=GO:0009243,GO:0047733;gbkey=CDS;gene=rfbG;go_function=CDP-glucose 4%2C6-dehydratase activity|0047733||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461036.1;locus_tag=CCO47_RS08395;product=CDP-glucose 4%2C6-dehydratase;protein_id=WP_000565910.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1774165 1775478 . + . ID=gene-CCO47_RS08400;Name=rfbH;gbkey=Gene;gene=rfbH;gene_biotype=protein_coding;locus_tag=CCO47_RS08400;old_locus_tag=CCO47_08400 NZ_CP075113.1 Protein Homology CDS 1774165 1775478 . + 0 ID=cds-WP_000126349.1;Parent=gene-CCO47_RS08400;Dbxref=GenBank:WP_000126349.1;Name=WP_000126349.1;Ontology_term=GO:0003824;gbkey=CDS;gene=rfbH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461035.1;locus_tag=CCO47_RS08400;product=lipopolysaccharide biosynthesis protein RfbH;protein_id=WP_000126349.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1775514 1776353 . + . ID=gene-CCO47_RS08405;Name=rfbS;gbkey=Gene;gene=rfbS;gene_biotype=protein_coding;locus_tag=CCO47_RS08405;old_locus_tag=CCO47_08405 NZ_CP075113.1 Protein Homology CDS 1775514 1776353 . + 0 ID=cds-WP_000697758.1;Parent=gene-CCO47_RS08405;Dbxref=GenBank:WP_000697758.1;Name=WP_000697758.1;gbkey=CDS;gene=rfbS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000697757.1;locus_tag=CCO47_RS08405;product=CDP-paratose synthase;protein_id=WP_000697758.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1776350 1777366 . + . ID=gene-CCO47_RS08410;Name=rfbE;gbkey=Gene;gene=rfbE;gene_biotype=protein_coding;locus_tag=CCO47_RS08410;old_locus_tag=CCO47_08410 NZ_CP075113.1 Protein Homology CDS 1776350 1777366 . + 0 ID=cds-WP_000770933.1;Parent=gene-CCO47_RS08410;Dbxref=GenBank:WP_000770933.1;Name=WP_000770933.1;gbkey=CDS;gene=rfbE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000770936.1;locus_tag=CCO47_RS08410;product=CDP-paratose 2-epimerase;protein_id=WP_000770933.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1777437 1778735 . + . ID=gene-CCO47_RS08415;Name=CCO47_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08415;old_locus_tag=CCO47_08415 NZ_CP075113.1 Protein Homology CDS 1777437 1778735 . + 0 ID=cds-WP_001228888.1;Parent=gene-CCO47_RS08415;Dbxref=GenBank:WP_001228888.1;Name=WP_001228888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001228887.1;locus_tag=CCO47_RS08415;product=MATE family efflux transporter;protein_id=WP_001228888.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1778737 1779738 . + . ID=gene-CCO47_RS08420;Name=CCO47_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08420;old_locus_tag=CCO47_08420 NZ_CP075113.1 Protein Homology CDS 1778737 1779738 . + 0 ID=cds-WP_000868492.1;Parent=gene-CCO47_RS08420;Dbxref=GenBank:WP_000868492.1;Name=WP_000868492.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233008.1;locus_tag=CCO47_RS08420;product=glycosyltransferase family 2 protein;protein_id=WP_000868492.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1780313 1781374 . + . ID=gene-CCO47_RS08425;Name=CCO47_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08425;old_locus_tag=CCO47_08425 NZ_CP075113.1 Protein Homology CDS 1780313 1781374 . + 0 ID=cds-WP_001521643.1;Parent=gene-CCO47_RS08425;Dbxref=GenBank:WP_001521643.1;Name=WP_001521643.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461031.1;locus_tag=CCO47_RS08425;product=glycosyltransferase family 4 protein;protein_id=WP_001521643.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1781375 1782319 . + . ID=gene-CCO47_RS08430;Name=rfbN;gbkey=Gene;gene=rfbN;gene_biotype=protein_coding;locus_tag=CCO47_RS08430;old_locus_tag=CCO47_08430 NZ_CP075113.1 Protein Homology CDS 1781375 1782319 . + 0 ID=cds-WP_000705151.1;Parent=gene-CCO47_RS08430;Dbxref=GenBank:WP_000705151.1;Name=WP_000705151.1;gbkey=CDS;gene=rfbN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461030.1;locus_tag=CCO47_RS08430;product=O antigen biosynthesis rhamnosyltransferase RfbN;protein_id=WP_000705151.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1782320 1783759 . + . ID=gene-CCO47_RS08435;Name=CCO47_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08435;old_locus_tag=CCO47_08435 NZ_CP075113.1 Protein Homology CDS 1782320 1783759 . + 0 ID=cds-WP_000009016.1;Parent=gene-CCO47_RS08435;Dbxref=GenBank:WP_000009016.1;Name=WP_000009016.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461029.1;locus_tag=CCO47_RS08435;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_000009016.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1783746 1785179 . + . ID=gene-CCO47_RS08440;Name=rfbK;gbkey=Gene;gene=rfbK;gene_biotype=protein_coding;locus_tag=CCO47_RS08440;old_locus_tag=CCO47_08440 NZ_CP075113.1 Protein Homology CDS 1783746 1785179 . + 0 ID=cds-WP_001103642.1;Parent=gene-CCO47_RS08440;Dbxref=GenBank:WP_001103642.1;Name=WP_001103642.1;gbkey=CDS;gene=rfbK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461028.1;locus_tag=CCO47_RS08440;product=O-antigen biosynthesis phosphomannomutase RfbK;protein_id=WP_001103642.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1785250 1786679 . + . ID=gene-CCO47_RS08445;Name=CCO47_RS08445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS08445;old_locus_tag=CCO47_08445;pseudo=true NZ_CP075113.1 Protein Homology CDS 1785250 1786679 . + 0 ID=cds-CCO47_RS08445;Parent=gene-CCO47_RS08445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461027.1;locus_tag=CCO47_RS08445;product=undecaprenyl-phosphate galactose phosphotransferase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1786843 1788249 . + . ID=gene-CCO47_RS08450;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=CCO47_RS08450;old_locus_tag=CCO47_08450 NZ_CP075113.1 Protein Homology CDS 1786843 1788249 . + 0 ID=cds-WP_000043532.1;Parent=gene-CCO47_RS08450;Dbxref=GenBank:WP_000043532.1;Name=WP_000043532.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461026.1;locus_tag=CCO47_RS08450;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_000043532.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1788487 1789653 . + . ID=gene-CCO47_RS08455;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=CCO47_RS08455;old_locus_tag=CCO47_08455 NZ_CP075113.1 Protein Homology CDS 1788487 1789653 . + 0 ID=cds-WP_000704825.1;Parent=gene-CCO47_RS08455;Dbxref=GenBank:WP_000704825.1;Name=WP_000704825.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461025.1;locus_tag=CCO47_RS08455;product=UDP-glucose 6-dehydrogenase;protein_id=WP_000704825.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1789796 1790779 . + . ID=gene-CCO47_RS08460;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=CCO47_RS08460;old_locus_tag=CCO47_08460 NZ_CP075113.1 Protein Homology CDS 1789796 1790779 . + 0 ID=cds-WP_000215261.1;Parent=gene-CCO47_RS08460;Dbxref=GenBank:WP_000215261.1;Name=WP_000215261.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461024.1;locus_tag=CCO47_RS08460;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_000215261.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1790860 1791471 . - . ID=gene-CCO47_RS08465;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=CCO47_RS08465;old_locus_tag=CCO47_08465 NZ_CP075113.1 Protein Homology CDS 1790860 1791471 . - 0 ID=cds-WP_000954848.1;Parent=gene-CCO47_RS08465;Dbxref=GenBank:WP_000954848.1;Name=WP_000954848.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=CCO47_RS08465;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_000954848.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1791465 1792241 . - . ID=gene-CCO47_RS08470;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=CCO47_RS08470;old_locus_tag=CCO47_08470 NZ_CP075113.1 Protein Homology CDS 1791465 1792241 . - 0 ID=cds-WP_000880124.1;Parent=gene-CCO47_RS08470;Dbxref=GenBank:WP_000880124.1;Name=WP_000880124.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461022.1;locus_tag=CCO47_RS08470;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_000880124.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1792223 1792960 . - . ID=gene-CCO47_RS08475;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=CCO47_RS08475;old_locus_tag=CCO47_08475 NZ_CP075113.1 Protein Homology CDS 1792223 1792960 . - 0 ID=cds-WP_000586406.1;Parent=gene-CCO47_RS08475;Dbxref=GenBank:WP_000586406.1;Name=WP_000586406.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461021.1;locus_tag=CCO47_RS08475;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_000586406.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1792960 1793550 . - . ID=gene-CCO47_RS08480;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=CCO47_RS08480;old_locus_tag=CCO47_08480 NZ_CP075113.1 Protein Homology CDS 1792960 1793550 . - 0 ID=cds-WP_094912340.1;Parent=gene-CCO47_RS08480;Dbxref=GenBank:WP_094912340.1;Name=WP_094912340.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=CCO47_RS08480;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_094912340.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1793550 1794617 . - . ID=gene-CCO47_RS08485;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=CCO47_RS08485;old_locus_tag=CCO47_08485 NZ_CP075113.1 Protein Homology CDS 1793550 1794617 . - 0 ID=cds-WP_000080044.1;Parent=gene-CCO47_RS08485;Dbxref=GenBank:WP_000080044.1;Name=WP_000080044.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=CCO47_RS08485;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_000080044.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1794614 1795693 . - . ID=gene-CCO47_RS08490;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=CCO47_RS08490;old_locus_tag=CCO47_08490 NZ_CP075113.1 Protein Homology CDS 1794614 1795693 . - 0 ID=cds-WP_000102717.1;Parent=gene-CCO47_RS08490;Dbxref=GenBank:WP_000102717.1;Name=WP_000102717.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=CCO47_RS08490;product=histidinol-phosphate transaminase;protein_id=WP_000102717.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1795690 1796994 . - . ID=gene-CCO47_RS08495;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=CCO47_RS08495;old_locus_tag=CCO47_08495 NZ_CP075113.1 Protein Homology CDS 1795690 1796994 . - 0 ID=cds-WP_000009624.1;Parent=gene-CCO47_RS08495;Dbxref=GenBank:WP_000009624.1;Name=WP_000009624.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=CCO47_RS08495;product=histidinol dehydrogenase;protein_id=WP_000009624.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1797097 1797996 . - . ID=gene-CCO47_RS08500;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=CCO47_RS08500;old_locus_tag=CCO47_08500 NZ_CP075113.1 Protein Homology CDS 1797097 1797996 . - 0 ID=cds-WP_000886604.1;Parent=gene-CCO47_RS08500;Dbxref=GenBank:WP_000886604.1;Name=WP_000886604.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=CCO47_RS08500;product=ATP phosphoribosyltransferase;protein_id=WP_000886604.1;transl_table=11 NZ_CP075113.1 cmsearch sequence_feature 1798043 1798166 . - . ID=id-NZ_CP075113.1:1798043..1798166;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_CP075113.1 RefSeq gene 1798142 1798192 . - . ID=gene-CCO47_RS08505;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=CCO47_RS08505;old_locus_tag=CCO47_08505 NZ_CP075113.1 Protein Homology CDS 1798142 1798192 . - 0 ID=cds-WP_001364200.1;Parent=gene-CCO47_RS08505;Dbxref=GenBank:WP_001364200.1;Name=WP_001364200.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=CCO47_RS08505;product=his operon leader peptide;protein_id=WP_001364200.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1798355 1799179 . + . ID=gene-CCO47_RS08510;Name=CCO47_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08510;old_locus_tag=CCO47_08510 NZ_CP075113.1 Protein Homology CDS 1798355 1799179 . + 0 ID=cds-WP_000754712.1;Parent=gene-CCO47_RS08510;Dbxref=GenBank:WP_000754712.1;Name=WP_000754712.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461015.1;locus_tag=CCO47_RS08510;product=SDR family oxidoreductase;protein_id=WP_000754712.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1799225 1800139 . + . ID=gene-CCO47_RS08515;Name=CCO47_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08515;old_locus_tag=CCO47_08515 NZ_CP075113.1 Protein Homology CDS 1799225 1800139 . + 0 ID=cds-WP_000803316.1;Parent=gene-CCO47_RS08515;Dbxref=GenBank:WP_000803316.1;Name=WP_000803316.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461014.1;locus_tag=CCO47_RS08515;product=LysR family transcriptional regulator;protein_id=WP_000803316.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1800373 1800435 . + . ID=gene-CCO47_RS08520;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=CCO47_RS08520;old_locus_tag=CCO47_08520 NZ_CP075113.1 Protein Homology CDS 1800373 1800435 . + 0 ID=cds-WP_096335044.1;Parent=gene-CCO47_RS08520;Dbxref=GenBank:WP_096335044.1;Name=WP_096335044.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=CCO47_RS08520;product=membrane protein YoeI;protein_id=WP_096335044.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1800425 1801783 . + . ID=gene-CCO47_RS08525;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=CCO47_RS08525;old_locus_tag=CCO47_08525 NZ_CP075113.1 Protein Homology CDS 1800425 1801783 . + 0 ID=cds-WP_001519005.1;Parent=gene-CCO47_RS08525;Dbxref=GenBank:WP_001519005.1;Name=WP_001519005.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=CCO47_RS08525;product=putrescine/proton symporter PlaP;protein_id=WP_001519005.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1801919 1803349 . - . ID=gene-CCO47_RS08530;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=CCO47_RS08530;old_locus_tag=CCO47_08530 NZ_CP075113.1 Protein Homology CDS 1801919 1803349 . - 0 ID=cds-WP_000216702.1;Parent=gene-CCO47_RS08530;Dbxref=GenBank:WP_000216702.1;Name=WP_000216702.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461012.1;locus_tag=CCO47_RS08530;product=exodeoxyribonuclease I;protein_id=WP_000216702.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1803509 1803586 . + . ID=gene-CCO47_RS24110;Name=CCO47_RS24110;end_range=1803586,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24110;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 1803509 1803586 . + 0 ID=cds-CCO47_RS24110;Parent=gene-CCO47_RS24110;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1803586,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226536.1;locus_tag=CCO47_RS24110;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1803716 1806064 . - . ID=gene-CCO47_RS08535;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=CCO47_RS08535;old_locus_tag=CCO47_08535 NZ_CP075113.1 Protein Homology CDS 1803716 1806064 . - 0 ID=cds-WP_000703992.1;Parent=gene-CCO47_RS08535;Dbxref=GenBank:WP_000703992.1;Name=WP_000703992.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=CCO47_RS08535;product=SPI-1 type III secretion system effector HECT-type E3 ubiquitin transferase SopA;protein_id=WP_000703992.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1806331 1806423 . + . ID=gene-CCO47_RS08540;Name=CCO47_RS08540;end_range=1806423,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS08540;old_locus_tag=CCO47_08540;partial=true;pseudo=true;start_range=.,1806331 NZ_CP075113.1 Protein Homology CDS 1806331 1806423 . + 0 ID=cds-CCO47_RS08540;Parent=gene-CCO47_RS08540;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1806423,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=CCO47_RS08540;partial=true;product=heavy metal-binding domain-containing protein;pseudo=true;start_range=.,1806331;transl_table=11 NZ_CP075113.1 RefSeq gene 1806683 1808959 . + . ID=gene-CCO47_RS08545;Name=phsA;gbkey=Gene;gene=phsA;gene_biotype=protein_coding;locus_tag=CCO47_RS08545;old_locus_tag=CCO47_08545 NZ_CP075113.1 Protein Homology CDS 1806683 1808959 . + 0 ID=cds-WP_000028227.1;Parent=gene-CCO47_RS08545;Dbxref=GenBank:WP_000028227.1;Name=WP_000028227.1;Ontology_term=GO:0016491,GO:0043546,GO:0051539;gbkey=CDS;gene=phsA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461010.1;locus_tag=CCO47_RS08545;product=thiosulfate reductase PhsA;protein_id=WP_000028227.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1808974 1809552 . + . ID=gene-CCO47_RS08550;Name=phsB;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=CCO47_RS08550;old_locus_tag=CCO47_08550 NZ_CP075113.1 Protein Homology CDS 1808974 1809552 . + 0 ID=cds-WP_001015351.1;Parent=gene-CCO47_RS08550;Dbxref=GenBank:WP_001015351.1;Name=WP_001015351.1;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461009.1;locus_tag=CCO47_RS08550;product=thiosulfate reductase electron transport protein PhsB;protein_id=WP_001015351.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1809549 1810313 . + . ID=gene-CCO47_RS08555;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=CCO47_RS08555;old_locus_tag=CCO47_08555 NZ_CP075113.1 Protein Homology CDS 1809549 1810313 . + 0 ID=cds-WP_001092562.1;Parent=gene-CCO47_RS08555;Dbxref=GenBank:WP_001092562.1;Name=WP_001092562.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461008.1;locus_tag=CCO47_RS08555;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_001092562.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1810437 1811609 . + . ID=gene-CCO47_RS08560;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=CCO47_RS08560;old_locus_tag=CCO47_08560 NZ_CP075113.1 Protein Homology CDS 1810437 1811609 . + 0 ID=cds-WP_000925048.1;Parent=gene-CCO47_RS08560;Dbxref=GenBank:WP_000925048.1;Name=WP_000925048.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=CCO47_RS08560;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_000925048.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1811760 1812227 . + . ID=gene-CCO47_RS08565;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=CCO47_RS08565;old_locus_tag=CCO47_08565 NZ_CP075113.1 Protein Homology CDS 1811760 1812227 . + 0 ID=cds-WP_000384326.1;Parent=gene-CCO47_RS08565;Dbxref=GenBank:WP_000384326.1;Name=WP_000384326.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461006.1;locus_tag=CCO47_RS08565;product=DNA gyrase inhibitor SbmC;protein_id=WP_000384326.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1812346 1813404 . + . ID=gene-CCO47_RS08570;Name=CCO47_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08570;old_locus_tag=CCO47_08570 NZ_CP075113.1 Protein Homology CDS 1812346 1813404 . + 0 ID=cds-WP_001200849.1;Parent=gene-CCO47_RS08570;Dbxref=GenBank:WP_001200849.1;Name=WP_001200849.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461005.1;locus_tag=CCO47_RS08570;product=FUSC family protein;protein_id=WP_001200849.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1813649 1813984 . + . ID=gene-CCO47_RS08575;Name=CCO47_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08575;old_locus_tag=CCO47_08575 NZ_CP075113.1 Protein Homology CDS 1813649 1813984 . + 0 ID=cds-WP_000450405.1;Parent=gene-CCO47_RS08575;Dbxref=GenBank:WP_000450405.1;Name=WP_000450405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461004.1;locus_tag=CCO47_RS08575;product=DUF496 family protein;protein_id=WP_000450405.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1814018 1814884 . - . ID=gene-CCO47_RS08580;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=CCO47_RS08580;old_locus_tag=CCO47_08580 NZ_CP075113.1 Protein Homology CDS 1814018 1814884 . - 0 ID=cds-WP_001808089.1;Parent=gene-CCO47_RS08580;Dbxref=GenBank:WP_001808089.1;Name=WP_001808089.1;gbkey=CDS;gene=pduX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=CCO47_RS08580;product=L-threonine kinase PduX;protein_id=WP_001808089.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1814978 1816192 . - . ID=gene-CCO47_RS08585;Name=pduW;gbkey=Gene;gene=pduW;gene_biotype=protein_coding;locus_tag=CCO47_RS08585;old_locus_tag=CCO47_08585 NZ_CP075113.1 Protein Homology CDS 1814978 1816192 . - 0 ID=cds-WP_000120649.1;Parent=gene-CCO47_RS08585;Dbxref=GenBank:WP_000120649.1;Name=WP_000120649.1;gbkey=CDS;gene=pduW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=CCO47_RS08585;product=propanediol utilization propionate kinase PduW;protein_id=WP_000120649.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1816177 1816629 . - . ID=gene-CCO47_RS08590;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=CCO47_RS08590;old_locus_tag=CCO47_08590 NZ_CP075113.1 Protein Homology CDS 1816177 1816629 . - 0 ID=cds-WP_000826277.1;Parent=gene-CCO47_RS08590;Dbxref=GenBank:WP_000826277.1;Name=WP_000826277.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=CCO47_RS08590;product=propanediol utilization protein PduV;protein_id=WP_000826277.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1816634 1816984 . - . ID=gene-CCO47_RS08595;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=CCO47_RS08595;old_locus_tag=CCO47_08595 NZ_CP075113.1 Protein Homology CDS 1816634 1816984 . - 0 ID=cds-WP_000441103.1;Parent=gene-CCO47_RS08595;Dbxref=GenBank:WP_000441103.1;Name=WP_000441103.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461000.1;locus_tag=CCO47_RS08595;product=propanediol utilization microcompartment protein PduU;protein_id=WP_000441103.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1816984 1817538 . - . ID=gene-CCO47_RS08600;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=CCO47_RS08600;old_locus_tag=CCO47_08600 NZ_CP075113.1 Protein Homology CDS 1816984 1817538 . - 0 ID=cds-WP_000075778.1;Parent=gene-CCO47_RS08600;Dbxref=GenBank:WP_000075778.1;Name=WP_000075778.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=CCO47_RS08600;product=propanediol utilization microcompartment protein PduT;protein_id=WP_000075778.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1817541 1818896 . - . ID=gene-CCO47_RS08605;Name=pduS;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=CCO47_RS08605;old_locus_tag=CCO47_08605 NZ_CP075113.1 Protein Homology CDS 1817541 1818896 . - 0 ID=cds-WP_001271294.1;Parent=gene-CCO47_RS08605;Dbxref=GenBank:WP_001271294.1;Name=WP_001271294.1;gbkey=CDS;gene=pduS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=CCO47_RS08605;product=cobalamin reductase PduS;protein_id=WP_001271294.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1818893 1820005 . - . ID=gene-CCO47_RS08610;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=CCO47_RS08610;old_locus_tag=CCO47_08610 NZ_CP075113.1 Protein Homology CDS 1818893 1820005 . - 0 ID=cds-WP_001091461.1;Parent=gene-CCO47_RS08610;Dbxref=GenBank:WP_001091461.1;Name=WP_001091461.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460997.1;locus_tag=CCO47_RS08610;product=1-propanol dehydrogenase PduQ;protein_id=WP_001091461.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1820017 1821411 . - . ID=gene-CCO47_RS08615;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=CCO47_RS08615;old_locus_tag=CCO47_08615 NZ_CP075113.1 Protein Homology CDS 1820017 1821411 . - 0 ID=cds-WP_001097677.1;Parent=gene-CCO47_RS08615;Dbxref=GenBank:WP_001097677.1;Name=WP_001097677.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=CCO47_RS08615;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=WP_001097677.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1821408 1822418 . - . ID=gene-CCO47_RS08620;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=protein_coding;locus_tag=CCO47_RS08620;old_locus_tag=CCO47_08620 NZ_CP075113.1 Protein Homology CDS 1821408 1822418 . - 0 ID=cds-WP_001029490.1;Parent=gene-CCO47_RS08620;Dbxref=GenBank:WP_001029490.1;Name=WP_001029490.1;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460995.1;locus_tag=CCO47_RS08620;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;protein_id=WP_001029490.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1822428 1822703 . - . ID=gene-CCO47_RS08625;Name=pduN;gbkey=Gene;gene=pduN;gene_biotype=protein_coding;locus_tag=CCO47_RS08625;old_locus_tag=CCO47_08625 NZ_CP075113.1 Protein Homology CDS 1822428 1822703 . - 0 ID=cds-WP_000549825.1;Parent=gene-CCO47_RS08625;Dbxref=GenBank:WP_000549825.1;Name=WP_000549825.1;gbkey=CDS;gene=pduN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=CCO47_RS08625;product=propanediol utilization microcompartment protein PduN;protein_id=WP_000549825.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1822707 1823198 . - . ID=gene-CCO47_RS08630;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=CCO47_RS08630;old_locus_tag=CCO47_08630 NZ_CP075113.1 Protein Homology CDS 1822707 1823198 . - 0 ID=cds-WP_001012973.1;Parent=gene-CCO47_RS08630;Dbxref=GenBank:WP_001012973.1;Name=WP_001012973.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=CCO47_RS08630;product=microcompartment protein PduM;protein_id=WP_001012973.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1823195 1823827 . - . ID=gene-CCO47_RS08635;Name=CCO47_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08635;old_locus_tag=CCO47_08635 NZ_CP075113.1 Protein Homology CDS 1823195 1823827 . - 0 ID=cds-WP_000356719.1;Parent=gene-CCO47_RS08635;Dbxref=GenBank:WP_000356719.1;Name=WP_000356719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460992.1;locus_tag=CCO47_RS08635;product=phosphate propanoyltransferase;protein_id=WP_000356719.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1823827 1824309 . - . ID=gene-CCO47_RS08640;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=protein_coding;locus_tag=CCO47_RS08640;old_locus_tag=CCO47_08640 NZ_CP075113.1 Protein Homology CDS 1823827 1824309 . - 0 ID=cds-WP_001284393.1;Parent=gene-CCO47_RS08640;Dbxref=GenBank:WP_001284393.1;Name=WP_001284393.1;gbkey=CDS;gene=pduK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=CCO47_RS08640;product=propanediol utilization microcompartment protein PduK;protein_id=WP_001284393.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1824313 1824588 . - . ID=gene-CCO47_RS08645;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=CCO47_RS08645;old_locus_tag=CCO47_08645 NZ_CP075113.1 Protein Homology CDS 1824313 1824588 . - 0 ID=cds-WP_001057755.1;Parent=gene-CCO47_RS08645;Dbxref=GenBank:WP_001057755.1;Name=WP_001057755.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460990.1;locus_tag=CCO47_RS08645;product=propanediol utilization microcompartment protein PduJ;protein_id=WP_001057755.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1824607 1824957 . - . ID=gene-CCO47_RS08650;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=CCO47_RS08650;old_locus_tag=CCO47_08650 NZ_CP075113.1 Protein Homology CDS 1824607 1824957 . - 0 ID=cds-WP_000377975.1;Parent=gene-CCO47_RS08650;Dbxref=GenBank:WP_000377975.1;Name=WP_000377975.1;gbkey=CDS;gene=pduH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460989.1;locus_tag=CCO47_RS08650;product=propanediol dehydratase reactivase beta subunit PduH;protein_id=WP_000377975.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1824947 1826779 . - . ID=gene-CCO47_RS08655;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=protein_coding;locus_tag=CCO47_RS08655;old_locus_tag=CCO47_08655 NZ_CP075113.1 Protein Homology CDS 1824947 1826779 . - 0 ID=cds-WP_001268877.1;Parent=gene-CCO47_RS08655;Dbxref=GenBank:WP_001268877.1;Name=WP_001268877.1;gbkey=CDS;gene=pduG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=CCO47_RS08655;product=propanediol dehydratase reactivase alpha subunit PduG;protein_id=WP_001268877.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1826789 1827310 . - . ID=gene-CCO47_RS08660;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=CCO47_RS08660;old_locus_tag=CCO47_08660 NZ_CP075113.1 Protein Homology CDS 1826789 1827310 . - 0 ID=cds-WP_001090597.1;Parent=gene-CCO47_RS08660;Dbxref=GenBank:WP_001090597.1;Name=WP_001090597.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=CCO47_RS08660;product=propanediol dehydratase small subunit PduE;protein_id=WP_001090597.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1827325 1827999 . - . ID=gene-CCO47_RS08665;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=CCO47_RS08665;old_locus_tag=CCO47_08665 NZ_CP075113.1 Protein Homology CDS 1827325 1827999 . - 0 ID=cds-WP_000405052.1;Parent=gene-CCO47_RS08665;Dbxref=GenBank:WP_000405052.1;Name=WP_000405052.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=CCO47_RS08665;product=propanediol dehydratase medium subunit PduD;protein_id=WP_000405052.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1828010 1829674 . - . ID=gene-CCO47_RS08670;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=CCO47_RS08670;old_locus_tag=CCO47_08670 NZ_CP075113.1 Protein Homology CDS 1828010 1829674 . - 0 ID=cds-WP_001256896.1;Parent=gene-CCO47_RS08670;Dbxref=GenBank:WP_001256896.1;Name=WP_001256896.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=CCO47_RS08670;product=propanediol dehydratase large subunit PduC;protein_id=WP_001256896.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1829693 1830505 . - . ID=gene-CCO47_RS08675;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=CCO47_RS08675;old_locus_tag=CCO47_08675 NZ_CP075113.1 Protein Homology CDS 1829693 1830505 . - 0 ID=cds-WP_000097497.1;Parent=gene-CCO47_RS08675;Dbxref=GenBank:WP_000097497.1;Name=WP_000097497.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=CCO47_RS08675;product=propanediol utilization microcompartment protein PduB;protein_id=WP_000097497.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1830502 1830786 . - . ID=gene-CCO47_RS08680;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=CCO47_RS08680;old_locus_tag=CCO47_08680 NZ_CP075113.1 Protein Homology CDS 1830502 1830786 . - 0 ID=cds-WP_001183618.1;Parent=gene-CCO47_RS08680;Dbxref=GenBank:WP_001183618.1;Name=WP_001183618.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460983.1;locus_tag=CCO47_RS08680;product=propanediol utilization microcompartment protein PduA;protein_id=WP_001183618.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1831311 1832105 . + . ID=gene-CCO47_RS08685;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=CCO47_RS08685;old_locus_tag=CCO47_08685 NZ_CP075113.1 Protein Homology CDS 1831311 1832105 . + 0 ID=cds-WP_001000023.1;Parent=gene-CCO47_RS08685;Dbxref=GenBank:WP_001000023.1;Name=WP_001000023.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=CCO47_RS08685;product=propanediol diffusion facilitator PduF;protein_id=WP_001000023.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1832322 1833233 . + . ID=gene-CCO47_RS08690;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=CCO47_RS08690;old_locus_tag=CCO47_08690 NZ_CP075113.1 Protein Homology CDS 1832322 1833233 . + 0 ID=cds-WP_000622326.1;Parent=gene-CCO47_RS08690;Dbxref=GenBank:WP_000622326.1;Name=WP_000622326.1;Ontology_term=GO:0009236,GO:0051144,GO:0003700,GO:0043565;gbkey=CDS;gene=pocR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,1%2C2-propanediol catabolic process|0051144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=CCO47_RS08690;product=transcriptional regulator PocR;protein_id=WP_000622326.1;transl_table=11 NZ_CP075113.1 cmsearch riboswitch 1833559 1833733 . + . ID=id-NZ_CP075113.1:1833559..1833733;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CP075113.1 RefSeq gene 1833831 1835210 . + . ID=gene-CCO47_RS08695;Name=CCO47_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08695;old_locus_tag=CCO47_08695 NZ_CP075113.1 Protein Homology CDS 1833831 1835210 . + 0 ID=cds-WP_000741244.1;Parent=gene-CCO47_RS08695;Dbxref=GenBank:WP_000741244.1;Name=WP_000741244.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=CCO47_RS08695;product=cobyrinic acid a%2Cc-diamide synthase CobB;protein_id=WP_000741244.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1835207 1836166 . + . ID=gene-CCO47_RS08700;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=CCO47_RS08700;old_locus_tag=CCO47_08700 NZ_CP075113.1 Protein Homology CDS 1835207 1836166 . + 0 ID=cds-WP_000153654.1;Parent=gene-CCO47_RS08700;Dbxref=GenBank:WP_000153654.1;Name=WP_000153654.1;Ontology_term=GO:0009236,GO:0048472,GO:0016020;gbkey=CDS;gene=cbiB;go_component=membrane|0016020||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=CCO47_RS08700;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WP_000153654.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1836177 1836809 . + . ID=gene-CCO47_RS08705;Name=CCO47_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08705;old_locus_tag=CCO47_08705 NZ_CP075113.1 Protein Homology CDS 1836177 1836809 . + 0 ID=cds-WP_000558988.1;Parent=gene-CCO47_RS08705;Dbxref=GenBank:WP_000558988.1;Name=WP_000558988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=CCO47_RS08705;product=cobalt-precorrin-8 methylmutase;protein_id=WP_000558988.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1836809 1837948 . + . ID=gene-CCO47_RS08710;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=CCO47_RS08710;old_locus_tag=CCO47_08710 NZ_CP075113.1 Protein Homology CDS 1836809 1837948 . + 0 ID=cds-WP_001292910.1;Parent=gene-CCO47_RS08710;Dbxref=GenBank:WP_001292910.1;Name=WP_001292910.1;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=CCO47_RS08710;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;protein_id=WP_001292910.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1837942 1838547 . + . ID=gene-CCO47_RS08715;Name=CCO47_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08715;old_locus_tag=CCO47_08715 NZ_CP075113.1 Protein Homology CDS 1837942 1838547 . + 0 ID=cds-WP_000958840.1;Parent=gene-CCO47_RS08715;Dbxref=GenBank:WP_000958840.1;Name=WP_000958840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460976.1;locus_tag=CCO47_RS08715;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=WP_000958840.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1838537 1839115 . + . ID=gene-CCO47_RS08720;Name=CCO47_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08720;old_locus_tag=CCO47_08720 NZ_CP075113.1 Protein Homology CDS 1838537 1839115 . + 0 ID=cds-WP_000650985.1;Parent=gene-CCO47_RS08720;Dbxref=GenBank:WP_000650985.1;Name=WP_000650985.1;Ontology_term=GO:0009236,GO:0008276;gbkey=CDS;go_function=protein methyltransferase activity|0008276||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460975.1;locus_tag=CCO47_RS08720;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WP_000650985.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1839099 1839872 . + . ID=gene-CCO47_RS08725;Name=CCO47_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08725;old_locus_tag=CCO47_08725 NZ_CP075113.1 Protein Homology CDS 1839099 1839872 . + 0 ID=cds-WP_000004874.1;Parent=gene-CCO47_RS08725;Dbxref=GenBank:WP_000004874.1;Name=WP_000004874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460974.1;locus_tag=CCO47_RS08725;product=cobalt-precorrin-4 methyltransferase;protein_id=WP_000004874.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1839853 1840908 . + . ID=gene-CCO47_RS08730;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=CCO47_RS08730;old_locus_tag=CCO47_08730 NZ_CP075113.1 Protein Homology CDS 1839853 1840908 . + 0 ID=cds-WP_001098926.1;Parent=gene-CCO47_RS08730;Dbxref=GenBank:WP_001098926.1;Name=WP_001098926.1;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=CCO47_RS08730;product=cobalt-precorrin 5A hydrolase;protein_id=WP_001098926.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1840908 1841633 . + . ID=gene-CCO47_RS08735;Name=CCO47_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08735;old_locus_tag=CCO47_08735 NZ_CP075113.1 Protein Homology CDS 1840908 1841633 . + 0 ID=cds-WP_000953647.1;Parent=gene-CCO47_RS08735;Dbxref=GenBank:WP_000953647.1;Name=WP_000953647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460972.1;locus_tag=CCO47_RS08735;product=precorrin-3B C(17)-methyltransferase;protein_id=WP_000953647.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1841630 1842421 . + . ID=gene-CCO47_RS08740;Name=CCO47_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08740;old_locus_tag=CCO47_08740 NZ_CP075113.1 Protein Homology CDS 1841630 1842421 . + 0 ID=cds-WP_001001987.1;Parent=gene-CCO47_RS08740;Dbxref=GenBank:WP_001001987.1;Name=WP_001001987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460971.1;locus_tag=CCO47_RS08740;product=cobalt-precorrin-6A reductase;protein_id=WP_001001987.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1842424 1843218 . + . ID=gene-CCO47_RS08745;Name=cbiK;gbkey=Gene;gene=cbiK;gene_biotype=protein_coding;locus_tag=CCO47_RS08745;old_locus_tag=CCO47_08745 NZ_CP075113.1 Protein Homology CDS 1842424 1843218 . + 0 ID=cds-WP_000709774.1;Parent=gene-CCO47_RS08745;Dbxref=GenBank:WP_000709774.1;Name=WP_000709774.1;Ontology_term=GO:0006779,GO:0016852,GO:0046906;gbkey=CDS;gene=cbiK;go_function=sirohydrochlorin cobaltochelatase activity|0016852||IEA,tetrapyrrole binding|0046906||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=CCO47_RS08745;product=sirohydrochlorin cobaltochelatase;protein_id=WP_000709774.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1843215 1843928 . + . ID=gene-CCO47_RS08750;Name=CCO47_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08750;old_locus_tag=CCO47_08750 NZ_CP075113.1 Protein Homology CDS 1843215 1843928 . + 0 ID=cds-WP_001013560.1;Parent=gene-CCO47_RS08750;Dbxref=GenBank:WP_001013560.1;Name=WP_001013560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460969.1;locus_tag=CCO47_RS08750;product=cobalt-factor II C(20)-methyltransferase;protein_id=WP_001013560.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1843925 1844662 . + . ID=gene-CCO47_RS08755;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=CCO47_RS08755;old_locus_tag=CCO47_08755 NZ_CP075113.1 Protein Homology CDS 1843925 1844662 . + 0 ID=cds-WP_000764336.1;Parent=gene-CCO47_RS08755;Dbxref=GenBank:WP_000764336.1;Name=WP_000764336.1;Ontology_term=GO:0006824,GO:0009236,GO:0016020,GO:0043190;gbkey=CDS;gene=cbiM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=CCO47_RS08755;product=cobalt ECF transporter S component CbiM;protein_id=WP_000764336.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1844664 1844945 . + . ID=gene-CCO47_RS08760;Name=CCO47_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08760;old_locus_tag=CCO47_08760 NZ_CP075113.1 Protein Homology CDS 1844664 1844945 . + 0 ID=cds-WP_000753212.1;Parent=gene-CCO47_RS08760;Dbxref=GenBank:WP_000753212.1;Name=WP_000753212.1;Ontology_term=GO:0006824,GO:0009236,GO:0015087,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460967.1;locus_tag=CCO47_RS08760;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=WP_000753212.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1844932 1845609 . + . ID=gene-CCO47_RS08765;Name=CCO47_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08765;old_locus_tag=CCO47_08765 NZ_CP075113.1 Protein Homology CDS 1844932 1845609 . + 0 ID=cds-WP_000147122.1;Parent=gene-CCO47_RS08765;Dbxref=GenBank:WP_000147122.1;Name=WP_000147122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460966.1;locus_tag=CCO47_RS08765;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=WP_000147122.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1845618 1846433 . + . ID=gene-CCO47_RS08770;Name=CCO47_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08770;old_locus_tag=CCO47_08770 NZ_CP075113.1 Protein Homology CDS 1845618 1846433 . + 0 ID=cds-WP_000881542.1;Parent=gene-CCO47_RS08770;Dbxref=GenBank:WP_000881542.1;Name=WP_000881542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460965.1;locus_tag=CCO47_RS08770;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_000881542.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1846430 1847950 . + . ID=gene-CCO47_RS08775;Name=CCO47_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08775;old_locus_tag=CCO47_08775 NZ_CP075113.1 Protein Homology CDS 1846430 1847950 . + 0 ID=cds-WP_000189667.1;Parent=gene-CCO47_RS08775;Dbxref=GenBank:WP_000189667.1;Name=WP_000189667.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460964.1;locus_tag=CCO47_RS08775;product=cobyric acid synthase;protein_id=WP_000189667.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1847947 1848492 . + . ID=gene-CCO47_RS08780;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=CCO47_RS08780;old_locus_tag=CCO47_08780 NZ_CP075113.1 Protein Homology CDS 1847947 1848492 . + 0 ID=cds-WP_000973146.1;Parent=gene-CCO47_RS08780;Dbxref=GenBank:WP_000973146.1;Name=WP_000973146.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460963.1;locus_tag=CCO47_RS08780;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_000973146.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1848489 1849232 . + . ID=gene-CCO47_RS08785;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=CCO47_RS08785;old_locus_tag=CCO47_08785 NZ_CP075113.1 Protein Homology CDS 1848489 1849232 . + 0 ID=cds-WP_000039997.1;Parent=gene-CCO47_RS08785;Dbxref=GenBank:WP_000039997.1;Name=WP_000039997.1;Ontology_term=GO:0009236,GO:0008818,GO:0051073;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA,adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460962.1;locus_tag=CCO47_RS08785;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_000039997.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1849259 1850329 . + . ID=gene-CCO47_RS08790;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=CCO47_RS08790;old_locus_tag=CCO47_08790 NZ_CP075113.1 Protein Homology CDS 1849259 1850329 . + 0 ID=cds-WP_001193983.1;Parent=gene-CCO47_RS08790;Dbxref=GenBank:WP_001193983.1;Name=WP_001193983.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=CCO47_RS08790;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_001193983.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1850407 1851336 . + . ID=gene-CCO47_RS08795;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=CCO47_RS08795;old_locus_tag=CCO47_08795 NZ_CP075113.1 Protein Homology CDS 1850407 1851336 . + 0 ID=cds-WP_001252816.1;Parent=gene-CCO47_RS08795;Dbxref=GenBank:WP_001252816.1;Name=WP_001252816.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=CCO47_RS08795;product=L%2CD-transpeptidase;protein_id=WP_001252816.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1851562 1851637 . - . ID=gene-CCO47_RS08800;Name=CCO47_RS08800;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS08800;old_locus_tag=CCO47_08800 NZ_CP075113.1 tRNAscan-SE tRNA 1851562 1851637 . - . ID=rna-CCO47_RS08800;Parent=gene-CCO47_RS08800;anticodon=(pos:complement(1851602..1851604));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS08800;product=tRNA-Asn NZ_CP075113.1 tRNAscan-SE exon 1851562 1851637 . - . ID=exon-CCO47_RS08800-1;Parent=rna-CCO47_RS08800;anticodon=(pos:complement(1851602..1851604));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS08800;product=tRNA-Asn NZ_CP075113.1 RefSeq gene 1851797 1853254 . + . ID=gene-CCO47_RS08805;Name=CCO47_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08805;old_locus_tag=CCO47_08805 NZ_CP075113.1 Protein Homology CDS 1851797 1853254 . + 0 ID=cds-WP_094912292.1;Parent=gene-CCO47_RS08805;Dbxref=GenBank:WP_094912292.1;Name=WP_094912292.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460959.1;locus_tag=CCO47_RS08805;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WP_094912292.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1853395 1853470 . + . ID=gene-CCO47_RS08810;Name=CCO47_RS08810;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS08810;old_locus_tag=CCO47_08810 NZ_CP075113.1 tRNAscan-SE tRNA 1853395 1853470 . + . ID=rna-CCO47_RS08810;Parent=gene-CCO47_RS08810;anticodon=(pos:1853428..1853430);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS08810;product=tRNA-Asn NZ_CP075113.1 tRNAscan-SE exon 1853395 1853470 . + . ID=exon-CCO47_RS08810-1;Parent=rna-CCO47_RS08810;anticodon=(pos:1853428..1853430);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS08810;product=tRNA-Asn NZ_CP075113.1 RefSeq pseudogene 1853890 1854353 . + . ID=gene-CCO47_RS08815;Name=CCO47_RS08815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS08815;old_locus_tag=CCO47_08815;pseudo=true NZ_CP075113.1 Protein Homology CDS 1853890 1854353 . + 0 ID=cds-CCO47_RS08815;Parent=gene-CCO47_RS08815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211098.1;locus_tag=CCO47_RS08815;product=STM2901 family protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1854347 1854673 . + . ID=gene-CCO47_RS08820;Name=CCO47_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08820;old_locus_tag=CCO47_08820 NZ_CP075113.1 Protein Homology CDS 1854347 1854673 . + 0 ID=cds-WP_000228159.1;Parent=gene-CCO47_RS08820;Dbxref=GenBank:WP_000228159.1;Name=WP_000228159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460958.1;locus_tag=CCO47_RS08820;product=DUF1493 family protein;protein_id=WP_000228159.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1854662 1854823 . - . ID=gene-CCO47_RS08825;Name=CCO47_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08825;old_locus_tag=CCO47_08825 NZ_CP075113.1 Protein Homology CDS 1854662 1854823 . - 0 ID=cds-WP_001536381.1;Parent=gene-CCO47_RS08825;Dbxref=GenBank:WP_001536381.1;Name=WP_001536381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448416.1;locus_tag=CCO47_RS08825;product=hypothetical protein;protein_id=WP_001536381.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1854869 1856323 . + . ID=gene-CCO47_RS08830;Name=CCO47_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08830;old_locus_tag=CCO47_08830 NZ_CP075113.1 Protein Homology CDS 1854869 1856323 . + 0 ID=cds-WP_000428189.1;Parent=gene-CCO47_RS08830;Dbxref=GenBank:WP_000428189.1;Name=WP_000428189.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460956.1;locus_tag=CCO47_RS08830;product=AMP nucleosidase;protein_id=WP_000428189.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1856845 1857018 . - . ID=gene-CCO47_RS08835;Name=CCO47_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08835;old_locus_tag=CCO47_08835 NZ_CP075113.1 Protein Homology CDS 1856845 1857018 . - 0 ID=cds-WP_000957535.1;Parent=gene-CCO47_RS08835;Dbxref=GenBank:WP_000957535.1;Name=WP_000957535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957538.1;locus_tag=CCO47_RS08835;product=hypothetical protein;protein_id=WP_000957535.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1857066 1857170 . + . ID=gene-CCO47_RS08840;Name=CCO47_RS08840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS08840;old_locus_tag=CCO47_08840;partial=true;pseudo=true;start_range=.,1857066 NZ_CP075113.1 Protein Homology CDS 1857066 1857170 . + 0 ID=cds-CCO47_RS08840;Parent=gene-CCO47_RS08840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=CCO47_RS08840;partial=true;product=nucleotide-binding YajQ family protein;pseudo=true;start_range=.,1857066;transl_table=11 NZ_CP075113.1 RefSeq gene 1857228 1858958 . - . ID=gene-CCO47_RS08845;Name=CCO47_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08845;old_locus_tag=CCO47_08845 NZ_CP075113.1 Protein Homology CDS 1857228 1858958 . - 0 ID=cds-WP_000669120.1;Parent=gene-CCO47_RS08845;Dbxref=GenBank:WP_000669120.1;Name=WP_000669120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460955.1;locus_tag=CCO47_RS08845;product=hypothetical protein;protein_id=WP_000669120.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1859015 1860709 . - . ID=gene-CCO47_RS08850;Name=CCO47_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08850;old_locus_tag=CCO47_08850 NZ_CP075113.1 Protein Homology CDS 1859015 1860709 . - 0 ID=cds-WP_077904895.1;Parent=gene-CCO47_RS08850;Dbxref=GenBank:WP_077904895.1;Name=WP_077904895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460954.1;locus_tag=CCO47_RS08850;product=SEL1-like repeat protein;protein_id=WP_077904895.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1861393 1861671 . - . ID=gene-CCO47_RS08855;Name=CCO47_RS08855;end_range=1861671,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS08855;old_locus_tag=CCO47_08855;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 1861393 1861671 . - 0 ID=cds-CCO47_RS08855;Parent=gene-CCO47_RS08855;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1861671,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950586.1;locus_tag=CCO47_RS08855;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1861757 1862222 . - . ID=gene-CCO47_RS08860;Name=CCO47_RS08860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS08860;old_locus_tag=CCO47_08860;partial=true;pseudo=true;start_range=.,1861757 NZ_CP075113.1 Protein Homology CDS 1861757 1862222 . - 0 ID=cds-CCO47_RS08860;Parent=gene-CCO47_RS08860;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517119.1;locus_tag=CCO47_RS08860;partial=true;product=phage integrase N-terminal domain-containing protein;pseudo=true;start_range=.,1861757;transl_table=11 NZ_CP075113.1 RefSeq gene 1862697 1863221 . - . ID=gene-CCO47_RS08865;Name=CCO47_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08865;old_locus_tag=CCO47_08865 NZ_CP075113.1 Protein Homology CDS 1862697 1863221 . - 0 ID=cds-WP_001219023.1;Parent=gene-CCO47_RS08865;Dbxref=GenBank:WP_001219023.1;Name=WP_001219023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460952.1;locus_tag=CCO47_RS08865;product=peptidase;protein_id=WP_001219023.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1863764 1864639 . + . ID=gene-CCO47_RS08870;Name=CCO47_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08870;old_locus_tag=CCO47_08870 NZ_CP075113.1 Protein Homology CDS 1863764 1864639 . + 0 ID=cds-WP_000166862.1;Parent=gene-CCO47_RS08870;Dbxref=GenBank:WP_000166862.1;Name=WP_000166862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000166882.1;locus_tag=CCO47_RS08870;product=DUF6387 family protein;protein_id=WP_000166862.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1864790 1865008 . + . ID=gene-CCO47_RS08875;Name=CCO47_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08875;old_locus_tag=CCO47_08875 NZ_CP075113.1 Protein Homology CDS 1864790 1865008 . + 0 ID=cds-WP_000240779.1;Parent=gene-CCO47_RS08875;Dbxref=GenBank:WP_000240779.1;Name=WP_000240779.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240778.1;locus_tag=CCO47_RS08875;product=helix-turn-helix transcriptional regulator;protein_id=WP_000240779.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1865090 1865380 . + . ID=gene-CCO47_RS08880;Name=CCO47_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08880;old_locus_tag=CCO47_08880 NZ_CP075113.1 Protein Homology CDS 1865090 1865380 . + 0 ID=cds-WP_000687681.1;Parent=gene-CCO47_RS08880;Dbxref=GenBank:WP_000687681.1;Name=WP_000687681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524933.1;locus_tag=CCO47_RS08880;product=hypothetical protein;protein_id=WP_000687681.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1865425 1865721 . + . ID=gene-CCO47_RS08885;Name=CCO47_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08885;old_locus_tag=CCO47_08885 NZ_CP075113.1 Protein Homology CDS 1865425 1865721 . + 0 ID=cds-WP_001091329.1;Parent=gene-CCO47_RS08885;Dbxref=GenBank:WP_001091329.1;Name=WP_001091329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001091325.1;locus_tag=CCO47_RS08885;product=hypothetical protein;protein_id=WP_001091329.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1865967 1867238 . + . ID=gene-CCO47_RS08890;Name=CCO47_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08890;old_locus_tag=CCO47_08890 NZ_CP075113.1 Protein Homology CDS 1865967 1867238 . + 0 ID=cds-WP_000102010.1;Parent=gene-CCO47_RS08890;Dbxref=GenBank:WP_000102010.1;Name=WP_000102010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102011.1;locus_tag=CCO47_RS08890;product=SMODS domain-containing nucleotidyltransferase;protein_id=WP_000102010.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1867303 1867851 . + . ID=gene-CCO47_RS08895;Name=CCO47_RS08895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS08895;old_locus_tag=CCO47_08895;pseudo=true NZ_CP075113.1 Protein Homology CDS 1867303 1867851 . + 0 ID=cds-CCO47_RS08895;Parent=gene-CCO47_RS08895;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037287.7;locus_tag=CCO47_RS08895;product=SLATT domain-containing protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1867943 1868219 . - . ID=gene-CCO47_RS24120;Name=CCO47_RS24120;end_range=1868219,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24120;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 1867943 1868219 . - 0 ID=cds-CCO47_RS24120;Parent=gene-CCO47_RS24120;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1868219,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=CCO47_RS24120;partial=true;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1868267 1868671 . - . ID=gene-CCO47_RS08900;Name=CCO47_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08900;old_locus_tag=CCO47_08900 NZ_CP075113.1 Protein Homology CDS 1868267 1868671 . - 0 ID=cds-WP_001287371.1;Parent=gene-CCO47_RS08900;Dbxref=GenBank:WP_001287371.1;Name=WP_001287371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519859.1;locus_tag=CCO47_RS08900;product=H-NS family histone-like protein;protein_id=WP_001287371.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1868832 1869311 . - . ID=gene-CCO47_RS08905;Name=CCO47_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08905;old_locus_tag=CCO47_08905 NZ_CP075113.1 Protein Homology CDS 1868832 1869311 . - 0 ID=cds-WP_001233371.1;Parent=gene-CCO47_RS08905;Dbxref=GenBank:WP_001233371.1;Name=WP_001233371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233373.1;locus_tag=CCO47_RS08905;product=DUF4756 family protein;protein_id=WP_001233371.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1869397 1870188 . - . ID=gene-CCO47_RS08910;Name=CCO47_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08910;old_locus_tag=CCO47_08910 NZ_CP075113.1 Protein Homology CDS 1869397 1870188 . - 0 ID=cds-WP_000735923.1;Parent=gene-CCO47_RS08910;Dbxref=GenBank:WP_000735923.1;Name=WP_000735923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000735917.1;locus_tag=CCO47_RS08910;product=hypothetical protein;protein_id=WP_000735923.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1870216 1870950 . - . ID=gene-CCO47_RS08915;Name=CCO47_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08915;old_locus_tag=CCO47_08915 NZ_CP075113.1 Protein Homology CDS 1870216 1870950 . - 0 ID=cds-WP_001095779.1;Parent=gene-CCO47_RS08915;Dbxref=GenBank:WP_001095779.1;Name=WP_001095779.1;Ontology_term=GO:0006260,GO:0006276;gbkey=CDS;go_process=DNA replication|0006260||IEA,plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004860215.1;locus_tag=CCO47_RS08915;product=replication/maintenance protein RepL;protein_id=WP_001095779.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1872310 1872579 . + . ID=gene-CCO47_RS08920;Name=CCO47_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08920;old_locus_tag=CCO47_08920 NZ_CP075113.1 Protein Homology CDS 1872310 1872579 . + 0 ID=cds-WP_001059614.1;Parent=gene-CCO47_RS08920;Dbxref=GenBank:WP_001059614.1;Name=WP_001059614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059618.1;locus_tag=CCO47_RS08920;product=hypothetical protein;protein_id=WP_001059614.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1872664 1873050 . + . ID=gene-CCO47_RS08925;Name=CCO47_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08925;old_locus_tag=CCO47_08925 NZ_CP075113.1 Protein Homology CDS 1872664 1873050 . + 0 ID=cds-WP_001226498.1;Parent=gene-CCO47_RS08925;Dbxref=GenBank:WP_001226498.1;Name=WP_001226498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001226498.1;locus_tag=CCO47_RS08925;product=hypothetical protein;protein_id=WP_001226498.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1873106 1874068 . + . ID=gene-CCO47_RS08930;Name=CCO47_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08930;old_locus_tag=CCO47_08930 NZ_CP075113.1 Protein Homology CDS 1873106 1874068 . + 0 ID=cds-WP_000399004.1;Parent=gene-CCO47_RS08930;Dbxref=GenBank:WP_000399004.1;Name=WP_000399004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000399004.1;locus_tag=CCO47_RS08930;product=hypothetical protein;protein_id=WP_000399004.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1874120 1875730 . + . ID=gene-CCO47_RS08935;Name=CCO47_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08935;old_locus_tag=CCO47_08935 NZ_CP075113.1 Protein Homology CDS 1874120 1875730 . + 0 ID=cds-WP_000276240.1;Parent=gene-CCO47_RS08935;Dbxref=GenBank:WP_000276240.1;Name=WP_000276240.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000276246.1;locus_tag=CCO47_RS08935;product=class I SAM-dependent methyltransferase;protein_id=WP_000276240.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1875808 1876185 . - . ID=gene-CCO47_RS08940;Name=CCO47_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08940;old_locus_tag=CCO47_08940 NZ_CP075113.1 Protein Homology CDS 1875808 1876185 . - 0 ID=cds-WP_000734572.1;Parent=gene-CCO47_RS08940;Dbxref=GenBank:WP_000734572.1;Name=WP_000734572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734570.1;locus_tag=CCO47_RS08940;product=hypothetical protein;protein_id=WP_000734572.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1876218 1876691 . - . ID=gene-CCO47_RS08945;Name=CCO47_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08945;old_locus_tag=CCO47_08945 NZ_CP075113.1 Protein Homology CDS 1876218 1876691 . - 0 ID=cds-WP_000388421.1;Parent=gene-CCO47_RS08945;Dbxref=GenBank:WP_000388421.1;Name=WP_000388421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001351134.1;locus_tag=CCO47_RS08945;product=DUF4755 domain-containing protein;protein_id=WP_000388421.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1877126 1877656 . + . ID=gene-CCO47_RS08950;Name=CCO47_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08950;old_locus_tag=CCO47_08950 NZ_CP075113.1 Protein Homology CDS 1877126 1877656 . + 0 ID=cds-WP_000722543.1;Parent=gene-CCO47_RS08950;Dbxref=GenBank:WP_000722543.1;Name=WP_000722543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608353.1;locus_tag=CCO47_RS08950;product=lipoprotein;protein_id=WP_000722543.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1877667 1877930 . + . ID=gene-CCO47_RS08955;Name=CCO47_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08955;old_locus_tag=CCO47_08955 NZ_CP075113.1 Protein Homology CDS 1877667 1877930 . + 0 ID=cds-WP_000430094.1;Parent=gene-CCO47_RS08955;Dbxref=GenBank:WP_000430094.1;Name=WP_000430094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764615.1;locus_tag=CCO47_RS08955;product=hypothetical protein;protein_id=WP_000430094.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1878116 1879006 . + . ID=gene-CCO47_RS08960;Name=CCO47_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08960;old_locus_tag=CCO47_08960 NZ_CP075113.1 Protein Homology CDS 1878116 1879006 . + 0 ID=cds-WP_000972946.1;Parent=gene-CCO47_RS08960;Dbxref=GenBank:WP_000972946.1;Name=WP_000972946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000972947.1;locus_tag=CCO47_RS08960;product=DUF2971 domain-containing protein;protein_id=WP_000972946.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1879030 1880550 . - . ID=gene-CCO47_RS08965;Name=mobQ;gbkey=Gene;gene=mobQ;gene_biotype=protein_coding;locus_tag=CCO47_RS08965;old_locus_tag=CCO47_08965 NZ_CP075113.1 Protein Homology CDS 1879030 1880550 . - 0 ID=cds-WP_000964102.1;Parent=gene-CCO47_RS08965;Dbxref=GenBank:WP_000964102.1;Name=WP_000964102.1;gbkey=CDS;gene=mobQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000964095.1;locus_tag=CCO47_RS08965;product=MobQ family relaxase;protein_id=WP_000964102.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1881187 1881492 . + . ID=gene-CCO47_RS08970;Name=CCO47_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08970;old_locus_tag=CCO47_08970 NZ_CP075113.1 Protein Homology CDS 1881187 1881492 . + 0 ID=cds-WP_000368357.1;Parent=gene-CCO47_RS08970;Dbxref=GenBank:WP_000368357.1;Name=WP_000368357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368354.1;locus_tag=CCO47_RS08970;product=conjugal transfer protein TraD;protein_id=WP_000368357.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1881900 1882457 . + . ID=gene-CCO47_RS08975;Name=bfpA;gbkey=Gene;gene=bfpA;gene_biotype=protein_coding;locus_tag=CCO47_RS08975;old_locus_tag=CCO47_08975 NZ_CP075113.1 Protein Homology CDS 1881900 1882457 . + 0 ID=cds-WP_000243507.1;Parent=gene-CCO47_RS08975;Dbxref=GenBank:WP_000243507.1;Name=WP_000243507.1;gbkey=CDS;gene=bfpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000243508.1;locus_tag=CCO47_RS08975;product=type IV pilus major subunit protein BfpA;protein_id=WP_000243507.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1882473 1884311 . + . ID=gene-CCO47_RS08980;Name=CCO47_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08980;old_locus_tag=CCO47_08980 NZ_CP075113.1 Protein Homology CDS 1882473 1884311 . + 0 ID=cds-WP_001127942.1;Parent=gene-CCO47_RS08980;Dbxref=GenBank:WP_001127942.1;Name=WP_001127942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001127942.1;locus_tag=CCO47_RS08980;product=tail fiber protein;protein_id=WP_001127942.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1884313 1884657 . + . ID=gene-CCO47_RS24125;Name=CCO47_RS24125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24125;partial=true;pseudo=true;start_range=.,1884313 NZ_CP075113.1 Protein Homology CDS 1884313 1884657 . + 0 ID=cds-CCO47_RS24125;Parent=gene-CCO47_RS24125;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592083.1;locus_tag=CCO47_RS24125;partial=true;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;pseudo=true;start_range=.,1884313;transl_table=11 NZ_CP075113.1 RefSeq gene 1884885 1885766 . - . ID=gene-CCO47_RS08985;Name=CCO47_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08985;old_locus_tag=CCO47_08985 NZ_CP075113.1 Protein Homology CDS 1884885 1885766 . - 0 ID=cds-WP_000028416.1;Parent=gene-CCO47_RS08985;Dbxref=GenBank:WP_000028416.1;Name=WP_000028416.1;Ontology_term=GO:0007165,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028416.1;locus_tag=CCO47_RS08985;product=toll/interleukin-1 receptor domain-containing protein;protein_id=WP_000028416.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1886177 1886740 . + . ID=gene-CCO47_RS08990;Name=CCO47_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08990;old_locus_tag=CCO47_08990 NZ_CP075113.1 Protein Homology CDS 1886177 1886740 . + 0 ID=cds-WP_000072672.1;Parent=gene-CCO47_RS08990;Dbxref=GenBank:WP_000072672.1;Name=WP_000072672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000072670.1;locus_tag=CCO47_RS08990;product=hypothetical protein;protein_id=WP_000072672.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1887102 1887599 . + . ID=gene-CCO47_RS08995;Name=CCO47_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS08995;old_locus_tag=CCO47_08995 NZ_CP075113.1 Protein Homology CDS 1887102 1887599 . + 0 ID=cds-WP_001084817.1;Parent=gene-CCO47_RS08995;Dbxref=GenBank:WP_001084817.1;Name=WP_001084817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014341049.1;locus_tag=CCO47_RS08995;product=hypothetical protein;protein_id=WP_001084817.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1887623 1887814 . - . ID=gene-CCO47_RS24420;Name=CCO47_RS24420;end_range=1887814,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24420;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 1887623 1887814 . - 0 ID=cds-CCO47_RS24420;Parent=gene-CCO47_RS24420;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1887814,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004860263.1;locus_tag=CCO47_RS24420;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1888078 1888329 . + . ID=gene-CCO47_RS09000;Name=CCO47_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09000;old_locus_tag=CCO47_09000 NZ_CP075113.1 Protein Homology CDS 1888078 1888329 . + 0 ID=cds-WP_000042271.1;Parent=gene-CCO47_RS09000;Dbxref=GenBank:WP_000042271.1;Name=WP_000042271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212204.1;locus_tag=CCO47_RS09000;product=hypothetical protein;protein_id=WP_000042271.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1888401 1889675 . - . ID=gene-CCO47_RS09005;Name=CCO47_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09005;old_locus_tag=CCO47_09005 NZ_CP075113.1 Protein Homology CDS 1888401 1889675 . - 0 ID=cds-WP_001675745.1;Parent=gene-CCO47_RS09005;Dbxref=GenBank:WP_001675745.1;Name=WP_001675745.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=CCO47_RS09005;product=tyrosine-type recombinase/integrase;protein_id=WP_001675745.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1889855 1889930 . - . ID=gene-CCO47_RS09010;Name=CCO47_RS09010;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS09010;old_locus_tag=CCO47_09010 NZ_CP075113.1 tRNAscan-SE tRNA 1889855 1889930 . - . ID=rna-CCO47_RS09010;Parent=gene-CCO47_RS09010;anticodon=(pos:complement(1889895..1889897));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS09010;product=tRNA-Asn NZ_CP075113.1 tRNAscan-SE exon 1889855 1889930 . - . ID=exon-CCO47_RS09010-1;Parent=rna-CCO47_RS09010;anticodon=(pos:complement(1889895..1889897));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS09010;product=tRNA-Asn NZ_CP075113.1 RefSeq gene 1890031 1890828 . - . ID=gene-CCO47_RS09015;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=CCO47_RS09015;old_locus_tag=CCO47_09015 NZ_CP075113.1 Protein Homology CDS 1890031 1890828 . - 0 ID=cds-WP_000598920.1;Parent=gene-CCO47_RS09015;Dbxref=GenBank:WP_000598920.1;Name=WP_000598920.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460951.1;locus_tag=CCO47_RS09015;product=DgsA anti-repressor MtfA;protein_id=WP_000598920.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1890917 1891006 . + . ID=gene-CCO47_RS09020;Name=CCO47_RS09020;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS09020;old_locus_tag=CCO47_09020 NZ_CP075113.1 tRNAscan-SE tRNA 1890917 1891006 . + . ID=rna-CCO47_RS09020;Parent=gene-CCO47_RS09020;anticodon=(pos:1890951..1890953);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS09020;product=tRNA-Ser NZ_CP075113.1 tRNAscan-SE exon 1890917 1891006 . + . ID=exon-CCO47_RS09020-1;Parent=rna-CCO47_RS09020;anticodon=(pos:1890951..1890953);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS09020;product=tRNA-Ser NZ_CP075113.1 RefSeq gene 1891120 1892109 . - . ID=gene-CCO47_RS09025;Name=CCO47_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09025;old_locus_tag=CCO47_09025 NZ_CP075113.1 Protein Homology CDS 1891120 1892109 . - 0 ID=cds-WP_000532846.1;Parent=gene-CCO47_RS09025;Dbxref=GenBank:WP_000532846.1;Name=WP_000532846.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000532847.1;locus_tag=CCO47_RS09025;product=tyrosine-type recombinase/integrase;protein_id=WP_000532846.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1892111 1892338 . - . ID=gene-CCO47_RS09030;Name=CCO47_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09030;old_locus_tag=CCO47_09030 NZ_CP075113.1 Protein Homology CDS 1892111 1892338 . - 0 ID=cds-WP_001527041.1;Parent=gene-CCO47_RS09030;Dbxref=GenBank:WP_001527041.1;Name=WP_001527041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527041.1;locus_tag=CCO47_RS09030;product=DUF4224 domain-containing protein;protein_id=WP_001527041.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1892378 1892947 . - . ID=gene-CCO47_RS09035;Name=CCO47_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09035;old_locus_tag=CCO47_09035 NZ_CP075113.1 Protein Homology CDS 1892378 1892947 . - 0 ID=cds-WP_001061368.1;Parent=gene-CCO47_RS09035;Dbxref=GenBank:WP_001061368.1;Name=WP_001061368.1;Ontology_term=GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061370.1;locus_tag=CCO47_RS09035;product=3'-5' exonuclease;protein_id=WP_001061368.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1892944 1893693 . - . ID=gene-CCO47_RS09040;Name=CCO47_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09040;old_locus_tag=CCO47_09040 NZ_CP075113.1 Protein Homology CDS 1892944 1893693 . - 0 ID=cds-WP_000208093.1;Parent=gene-CCO47_RS09040;Dbxref=GenBank:WP_000208093.1;Name=WP_000208093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000208093.1;locus_tag=CCO47_RS09040;product=hypothetical protein;protein_id=WP_000208093.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1893697 1894170 . - . ID=gene-CCO47_RS09045;Name=CCO47_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09045;old_locus_tag=CCO47_09045 NZ_CP075113.1 Protein Homology CDS 1893697 1894170 . - 0 ID=cds-WP_000082797.1;Parent=gene-CCO47_RS09045;Dbxref=GenBank:WP_000082797.1;Name=WP_000082797.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752502.1;locus_tag=CCO47_RS09045;product=class I SAM-dependent methyltransferase;protein_id=WP_000082797.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1894170 1894907 . - . ID=gene-CCO47_RS09050;Name=CCO47_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09050;old_locus_tag=CCO47_09050 NZ_CP075113.1 Protein Homology CDS 1894170 1894907 . - 0 ID=cds-WP_001017850.1;Parent=gene-CCO47_RS09050;Dbxref=GenBank:WP_001017850.1;Name=WP_001017850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017850.1;locus_tag=CCO47_RS09050;product=ead/Ea22-like family protein;protein_id=WP_001017850.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1894978 1895517 . - . ID=gene-CCO47_RS09055;Name=CCO47_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09055;old_locus_tag=CCO47_09055 NZ_CP075113.1 Protein Homology CDS 1894978 1895517 . - 0 ID=cds-WP_000008351.1;Parent=gene-CCO47_RS09055;Dbxref=GenBank:WP_000008351.1;Name=WP_000008351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120458.1;locus_tag=CCO47_RS09055;product=hypothetical protein;protein_id=WP_000008351.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1895654 1896481 . - . ID=gene-CCO47_RS09060;Name=CCO47_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09060;old_locus_tag=CCO47_09060 NZ_CP075113.1 Protein Homology CDS 1895654 1896481 . - 0 ID=cds-WP_000080407.1;Parent=gene-CCO47_RS09060;Dbxref=GenBank:WP_000080407.1;Name=WP_000080407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080411.1;locus_tag=CCO47_RS09060;product=YfdQ family protein;protein_id=WP_000080407.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1896539 1896910 . - . ID=gene-CCO47_RS09065;Name=CCO47_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09065;old_locus_tag=CCO47_09065 NZ_CP075113.1 Protein Homology CDS 1896539 1896910 . - 0 ID=cds-WP_000997190.1;Parent=gene-CCO47_RS09065;Dbxref=GenBank:WP_000997190.1;Name=WP_000997190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012668372.1;locus_tag=CCO47_RS09065;product=YfdP family phage-associated protein;protein_id=WP_000997190.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1897610 1897885 . - . ID=gene-CCO47_RS09070;Name=CCO47_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09070;old_locus_tag=CCO47_09070 NZ_CP075113.1 Protein Homology CDS 1897610 1897885 . - 0 ID=cds-WP_001514782.1;Parent=gene-CCO47_RS09070;Dbxref=GenBank:WP_001514782.1;Name=WP_001514782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001547989.1;locus_tag=CCO47_RS09070;product=hypothetical protein;protein_id=WP_001514782.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1897887 1898138 . - . ID=gene-CCO47_RS09075;Name=CCO47_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09075;old_locus_tag=CCO47_09075 NZ_CP075113.1 Protein Homology CDS 1897887 1898138 . - 0 ID=cds-WP_001574551.1;Parent=gene-CCO47_RS09075;Dbxref=GenBank:WP_001574551.1;Name=WP_001574551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574551.1;locus_tag=CCO47_RS09075;product=hypothetical protein;protein_id=WP_001574551.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1898066 1898275 . - . ID=gene-CCO47_RS09080;Name=CCO47_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09080;old_locus_tag=CCO47_09080 NZ_CP075113.1 Protein Homology CDS 1898066 1898275 . - 0 ID=cds-WP_305954964.1;Parent=gene-CCO47_RS09080;Dbxref=GenBank:WP_305954964.1;Name=WP_305954964.1;Ontology_term=GO:0008270,GO:0046983;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: protein motif:HMM:NF018404.7;locus_tag=CCO47_RS09080;product=ClpX C4-type zinc finger protein;protein_id=WP_305954964.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1898456 1899151 . - . ID=gene-CCO47_RS09085;Name=CCO47_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09085;old_locus_tag=CCO47_09085 NZ_CP075113.1 Protein Homology CDS 1898456 1899151 . - 0 ID=cds-WP_001020640.1;Parent=gene-CCO47_RS09085;Dbxref=GenBank:WP_001020640.1;Name=WP_001020640.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001358750.1;locus_tag=CCO47_RS09085;product=XRE family transcriptional regulator;protein_id=WP_001020640.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1899249 1899473 . + . ID=gene-CCO47_RS09090;Name=CCO47_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09090;old_locus_tag=CCO47_09090 NZ_CP075113.1 Protein Homology CDS 1899249 1899473 . + 0 ID=cds-WP_001191666.1;Parent=gene-CCO47_RS09090;Dbxref=GenBank:WP_001191666.1;Name=WP_001191666.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001191959.1;locus_tag=CCO47_RS09090;product=helix-turn-helix domain-containing protein;protein_id=WP_001191666.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1899502 1900056 . + . ID=gene-CCO47_RS09095;Name=CCO47_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09095;old_locus_tag=CCO47_09095 NZ_CP075113.1 Protein Homology CDS 1899502 1900056 . + 0 ID=cds-WP_000509727.1;Parent=gene-CCO47_RS09095;Dbxref=GenBank:WP_000509727.1;Name=WP_000509727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509732.1;locus_tag=CCO47_RS09095;product=YmfL family putative regulatory protein;protein_id=WP_000509727.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1900053 1901195 . + . ID=gene-CCO47_RS09100;Name=CCO47_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09100;old_locus_tag=CCO47_09100 NZ_CP075113.1 Protein Homology CDS 1900053 1901195 . + 0 ID=cds-WP_001087400.1;Parent=gene-CCO47_RS09100;Dbxref=GenBank:WP_001087400.1;Name=WP_001087400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001087306.1;locus_tag=CCO47_RS09100;product=Rha family phage regulatory protein;protein_id=WP_001087400.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1901192 1901416 . + . ID=gene-CCO47_RS09105;Name=CCO47_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09105;old_locus_tag=CCO47_09105 NZ_CP075113.1 Protein Homology CDS 1901192 1901416 . + 0 ID=cds-WP_000620702.1;Parent=gene-CCO47_RS09105;Dbxref=GenBank:WP_000620702.1;Name=WP_000620702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401086.1;locus_tag=CCO47_RS09105;product=hypothetical protein;protein_id=WP_000620702.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1901413 1902387 . + . ID=gene-CCO47_RS09110;Name=CCO47_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09110;old_locus_tag=CCO47_09110 NZ_CP075113.1 Protein Homology CDS 1901413 1902387 . + 0 ID=cds-WP_000096530.1;Parent=gene-CCO47_RS09110;Dbxref=GenBank:WP_000096530.1;Name=WP_000096530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006669533.1;locus_tag=CCO47_RS09110;product=conserved phage C-terminal domain-containing protein;protein_id=WP_000096530.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1902384 1902857 . + . ID=gene-CCO47_RS09115;Name=CCO47_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09115;old_locus_tag=CCO47_09115 NZ_CP075113.1 Protein Homology CDS 1902384 1902857 . + 0 ID=cds-WP_000054229.1;Parent=gene-CCO47_RS09115;Dbxref=GenBank:WP_000054229.1;Name=WP_000054229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000054228.1;locus_tag=CCO47_RS09115;product=PerC family transcriptional regulator;protein_id=WP_000054229.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1902854 1903735 . + . ID=gene-CCO47_RS09120;Name=CCO47_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09120;old_locus_tag=CCO47_09120 NZ_CP075113.1 Protein Homology CDS 1902854 1903735 . + 0 ID=cds-WP_000200163.1;Parent=gene-CCO47_RS09120;Dbxref=GenBank:WP_000200163.1;Name=WP_000200163.1;Ontology_term=GO:0032775,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000200163.1;locus_tag=CCO47_RS09120;product=DNA adenine methylase;protein_id=WP_000200163.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1903744 1904133 . + . ID=gene-CCO47_RS09125;Name=CCO47_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09125;old_locus_tag=CCO47_09125 NZ_CP075113.1 Protein Homology CDS 1903744 1904133 . + 0 ID=cds-WP_000779148.1;Parent=gene-CCO47_RS09125;Dbxref=GenBank:WP_000779148.1;Name=WP_000779148.1;Ontology_term=GO:0006281,GO:0006310,GO:0000287,GO:0000400,GO:0008821;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,four-way junction DNA binding|0000400||IEA,crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000767134.1;locus_tag=CCO47_RS09125;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_000779148.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1904150 1905010 . + . ID=gene-CCO47_RS09130;Name=CCO47_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09130;old_locus_tag=CCO47_09130 NZ_CP075113.1 Protein Homology CDS 1904150 1905010 . + 0 ID=cds-WP_001061462.1;Parent=gene-CCO47_RS09130;Dbxref=GenBank:WP_001061462.1;Name=WP_001061462.1;Ontology_term=GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061457.1;locus_tag=CCO47_RS09130;product=KilA-N domain-containing protein;protein_id=WP_001061462.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1905018 1906007 . + . ID=gene-CCO47_RS09135;Name=CCO47_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09135;old_locus_tag=CCO47_09135 NZ_CP075113.1 Protein Homology CDS 1905018 1906007 . + 0 ID=cds-WP_024132394.1;Parent=gene-CCO47_RS09135;Dbxref=GenBank:WP_024132394.1;Name=WP_024132394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461183.1;locus_tag=CCO47_RS09135;product=DUF968 domain-containing protein;protein_id=WP_024132394.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1906021 1906773 . + . ID=gene-CCO47_RS09140;Name=CCO47_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09140;old_locus_tag=CCO47_09140 NZ_CP075113.1 Protein Homology CDS 1906021 1906773 . + 0 ID=cds-WP_001047086.1;Parent=gene-CCO47_RS09140;Dbxref=GenBank:WP_001047086.1;Name=WP_001047086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416077.4;locus_tag=CCO47_RS09140;product=antitermination protein;protein_id=WP_001047086.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1907062 1907304 . + . ID=gene-CCO47_RS09145;Name=CCO47_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09145;old_locus_tag=CCO47_09145 NZ_CP075113.1 Protein Homology CDS 1907062 1907304 . + 0 ID=cds-WP_024132393.1;Parent=gene-CCO47_RS09145;Dbxref=GenBank:WP_024132393.1;Name=WP_024132393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001306866.1;locus_tag=CCO47_RS09145;product=hypothetical protein;protein_id=WP_024132393.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1907442 1907783 . + . ID=gene-CCO47_RS09150;Name=CCO47_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09150;old_locus_tag=CCO47_09150 NZ_CP075113.1 Protein Homology CDS 1907442 1907783 . + 0 ID=cds-WP_162138162.1;Parent=gene-CCO47_RS09150;Dbxref=GenBank:WP_162138162.1;Name=WP_162138162.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001343704.1;locus_tag=CCO47_RS09150;product=phage holin%2C lambda family;protein_id=WP_162138162.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1907787 1908263 . + . ID=gene-CCO47_RS09155;Name=CCO47_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09155;old_locus_tag=CCO47_09155 NZ_CP075113.1 Protein Homology CDS 1907787 1908263 . + 0 ID=cds-WP_001148532.1;Parent=gene-CCO47_RS09155;Dbxref=GenBank:WP_001148532.1;Name=WP_001148532.1;Ontology_term=GO:0005975,GO:0003796,GO:0004553;gbkey=CDS;go_function=lysozyme activity|0003796||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159277.1;locus_tag=CCO47_RS09155;product=glycoside hydrolase family 24 protein;protein_id=WP_001148532.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1908247 1908639 . + . ID=gene-CCO47_RS09160;Name=CCO47_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09160;old_locus_tag=CCO47_09160 NZ_CP075113.1 Protein Homology CDS 1908247 1908639 . + 0 ID=cds-WP_001574547.1;Parent=gene-CCO47_RS09160;Dbxref=GenBank:WP_001574547.1;Name=WP_001574547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356320.1;locus_tag=CCO47_RS09160;product=DUF2570 family protein;protein_id=WP_001574547.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1908527 1908796 . + . ID=gene-CCO47_RS24540;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=CCO47_RS24540 NZ_CP075113.1 Protein Homology CDS 1908527 1908796 . + 0 ID=cds-WP_418895952.1;Parent=gene-CCO47_RS24540;Dbxref=GenBank:WP_418895952.1;Name=WP_418895952.1;gbkey=CDS;gene=lysC;inference=COORDINATES: protein motif:HMM:NF048206.2;locus_tag=CCO47_RS24540;product=Rz1-like lysis system protein LysC;protein_id=WP_418895952.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1909165 1909599 . + . ID=gene-CCO47_RS09165;Name=CCO47_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09165;old_locus_tag=CCO47_09165 NZ_CP075113.1 Protein Homology CDS 1909165 1909599 . + 0 ID=cds-WP_033868734.1;Parent=gene-CCO47_RS09165;Dbxref=GenBank:WP_033868734.1;Name=WP_033868734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159276.1;locus_tag=CCO47_RS09165;product=hypothetical protein;protein_id=WP_033868734.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1909727 1910077 . + . ID=gene-CCO47_RS09170;Name=CCO47_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09170;old_locus_tag=CCO47_09170 NZ_CP075113.1 Protein Homology CDS 1909727 1910077 . + 0 ID=cds-WP_001135209.1;Parent=gene-CCO47_RS09170;Dbxref=GenBank:WP_001135209.1;Name=WP_001135209.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135225.1;locus_tag=CCO47_RS09170;product=HNH endonuclease;protein_id=WP_001135209.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1910204 1910698 . + . ID=gene-CCO47_RS09175;Name=CCO47_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09175;old_locus_tag=CCO47_09175 NZ_CP075113.1 Protein Homology CDS 1910204 1910698 . + 0 ID=cds-WP_000929191.1;Parent=gene-CCO47_RS09175;Dbxref=GenBank:WP_000929191.1;Name=WP_000929191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016249564.1;locus_tag=CCO47_RS09175;product=phage terminase small subunit P27 family;protein_id=WP_000929191.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1910695 1912428 . + . ID=gene-CCO47_RS09180;Name=CCO47_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09180;old_locus_tag=CCO47_09180 NZ_CP075113.1 Protein Homology CDS 1910695 1912428 . + 0 ID=cds-WP_000088185.1;Parent=gene-CCO47_RS09180;Dbxref=GenBank:WP_000088185.1;Name=WP_000088185.1;Ontology_term=GO:0004519,GO:0005524,GO:0140657;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP-dependent activity|0140657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000088170.1;locus_tag=CCO47_RS09180;product=terminase large subunit;protein_id=WP_000088185.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1912440 1912622 . + . ID=gene-CCO47_RS09185;Name=ymfR;gbkey=Gene;gene=ymfR;gene_biotype=protein_coding;locus_tag=CCO47_RS09185;old_locus_tag=CCO47_09185 NZ_CP075113.1 Protein Homology CDS 1912440 1912622 . + 0 ID=cds-WP_000605609.1;Parent=gene-CCO47_RS09185;Dbxref=GenBank:WP_000605609.1;Name=WP_000605609.1;gbkey=CDS;gene=ymfR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415668.1;locus_tag=CCO47_RS09185;product=protein YmfR;protein_id=WP_000605609.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1912622 1913863 . + . ID=gene-CCO47_RS09190;Name=CCO47_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09190;old_locus_tag=CCO47_09190 NZ_CP075113.1 Protein Homology CDS 1912622 1913863 . + 0 ID=cds-WP_000466259.1;Parent=gene-CCO47_RS09190;Dbxref=GenBank:WP_000466259.1;Name=WP_000466259.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000466237.1;locus_tag=CCO47_RS09190;product=phage portal protein;protein_id=WP_000466259.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1913841 1914491 . + . ID=gene-CCO47_RS09195;Name=CCO47_RS09195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS09195;old_locus_tag=CCO47_09195;pseudo=true NZ_CP075113.1 Protein Homology CDS 1913841 1914491 . + 0 ID=cds-CCO47_RS09195;Parent=gene-CCO47_RS09195;Note=internal stop;Ontology_term=GO:0019068,GO:0019082,GO:0005198,GO:0008233;gbkey=CDS;go_function=structural molecule activity|0005198||IEA,peptidase activity|0008233||IEA;go_process=virion assembly|0019068||IEA,viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001193639.1;locus_tag=CCO47_RS09195;product=HK97 family phage prohead protease;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1914506 1915711 . + . ID=gene-CCO47_RS09200;Name=CCO47_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09200;old_locus_tag=CCO47_09200 NZ_CP075113.1 Protein Homology CDS 1914506 1915711 . + 0 ID=cds-WP_000257528.1;Parent=gene-CCO47_RS09200;Dbxref=GenBank:WP_000257528.1;Name=WP_000257528.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559678.1;locus_tag=CCO47_RS09200;product=phage major capsid protein;protein_id=WP_000257528.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1915762 1915962 . + . ID=gene-CCO47_RS09205;Name=CCO47_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09205;old_locus_tag=CCO47_09205 NZ_CP075113.1 Protein Homology CDS 1915762 1915962 . + 0 ID=cds-WP_000601353.1;Parent=gene-CCO47_RS09205;Dbxref=GenBank:WP_000601353.1;Name=WP_000601353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001735262.1;locus_tag=CCO47_RS09205;product=hypothetical protein;protein_id=WP_000601353.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1915965 1916288 . + . ID=gene-CCO47_RS09210;Name=CCO47_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09210;old_locus_tag=CCO47_09210 NZ_CP075113.1 Protein Homology CDS 1915965 1916288 . + 0 ID=cds-WP_000927378.1;Parent=gene-CCO47_RS09210;Dbxref=GenBank:WP_000927378.1;Name=WP_000927378.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001492759.1;locus_tag=CCO47_RS09210;product=head-tail connector protein;protein_id=WP_000927378.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1916285 1916689 . + . ID=gene-CCO47_RS09215;Name=CCO47_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09215;old_locus_tag=CCO47_09215 NZ_CP075113.1 Protein Homology CDS 1916285 1916689 . + 0 ID=cds-WP_000702409.1;Parent=gene-CCO47_RS09215;Dbxref=GenBank:WP_000702409.1;Name=WP_000702409.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000702408.1;locus_tag=CCO47_RS09215;product=phage head closure protein;protein_id=WP_000702409.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1916661 1917173 . + . ID=gene-CCO47_RS09220;Name=CCO47_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09220;old_locus_tag=CCO47_09220 NZ_CP075113.1 Protein Homology CDS 1916661 1917173 . + 0 ID=cds-WP_001135697.1;Parent=gene-CCO47_RS09220;Dbxref=GenBank:WP_001135697.1;Name=WP_001135697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135699.1;locus_tag=CCO47_RS09220;product=hypothetical protein;protein_id=WP_001135697.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1917170 1917730 . + . ID=gene-CCO47_RS09225;Name=CCO47_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09225;old_locus_tag=CCO47_09225 NZ_CP075113.1 Protein Homology CDS 1917170 1917730 . + 0 ID=cds-WP_000779217.1;Parent=gene-CCO47_RS09225;Dbxref=GenBank:WP_000779217.1;Name=WP_000779217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000779217.1;locus_tag=CCO47_RS09225;product=phage tail terminator protein;protein_id=WP_000779217.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1917734 1917898 . + . ID=gene-CCO47_RS09230;Name=CCO47_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09230;old_locus_tag=CCO47_09230 NZ_CP075113.1 Protein Homology CDS 1917734 1917898 . + 0 ID=cds-WP_000497739.1;Parent=gene-CCO47_RS09230;Dbxref=GenBank:WP_000497739.1;Name=WP_000497739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000497754.1;locus_tag=CCO47_RS09230;product=DUF2635 domain-containing protein;protein_id=WP_000497739.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1917888 1919384 . + . ID=gene-CCO47_RS09235;Name=CCO47_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09235;old_locus_tag=CCO47_09235 NZ_CP075113.1 Protein Homology CDS 1917888 1919384 . + 0 ID=cds-WP_001007990.1;Parent=gene-CCO47_RS09235;Dbxref=GenBank:WP_001007990.1;Name=WP_001007990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707867.1;locus_tag=CCO47_RS09235;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_001007990.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1919384 1919740 . + . ID=gene-CCO47_RS09240;Name=CCO47_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09240;old_locus_tag=CCO47_09240 NZ_CP075113.1 Protein Homology CDS 1919384 1919740 . + 0 ID=cds-WP_000515952.1;Parent=gene-CCO47_RS09240;Dbxref=GenBank:WP_000515952.1;Name=WP_000515952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707866.1;locus_tag=CCO47_RS09240;product=phage tail tube protein;protein_id=WP_000515952.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1919737 1920063 . + . ID=gene-CCO47_RS09245;Name=CCO47_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09245;old_locus_tag=CCO47_09245 NZ_CP075113.1 Protein Homology CDS 1919737 1920063 . + 0 ID=cds-WP_000588852.1;Parent=gene-CCO47_RS09245;Dbxref=GenBank:WP_000588852.1;Name=WP_000588852.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588853.1;locus_tag=CCO47_RS09245;product=phage tail assembly protein;protein_id=WP_000588852.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1920148 1922076 . + . ID=gene-CCO47_RS09250;Name=CCO47_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09250;old_locus_tag=CCO47_09250 NZ_CP075113.1 Protein Homology CDS 1920148 1922076 . + 0 ID=cds-WP_000785386.1;Parent=gene-CCO47_RS09250;Dbxref=GenBank:WP_000785386.1;Name=WP_000785386.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015968581.1;locus_tag=CCO47_RS09250;product=phage tail tape measure protein;protein_id=WP_000785386.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1922110 1923450 . + . ID=gene-CCO47_RS09255;Name=CCO47_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09255;old_locus_tag=CCO47_09255 NZ_CP075113.1 Protein Homology CDS 1922110 1923450 . + 0 ID=cds-WP_000863818.1;Parent=gene-CCO47_RS09255;Dbxref=GenBank:WP_000863818.1;Name=WP_000863818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742721.1;locus_tag=CCO47_RS09255;product=DNA circularization protein;protein_id=WP_000863818.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1923447 1924504 . + . ID=gene-CCO47_RS09260;Name=CCO47_RS09260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS09260;old_locus_tag=CCO47_09260;pseudo=true NZ_CP075113.1 Protein Homology CDS 1923447 1924504 . + 0 ID=cds-CCO47_RS09260;Parent=gene-CCO47_RS09260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066639.1;locus_tag=CCO47_RS09260;product=phage baseplate assembly protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1924504 1925037 . + . ID=gene-CCO47_RS09265;Name=CCO47_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09265;old_locus_tag=CCO47_09265 NZ_CP075113.1 Protein Homology CDS 1924504 1925037 . + 0 ID=cds-WP_001273649.1;Parent=gene-CCO47_RS09265;Dbxref=GenBank:WP_001273649.1;Name=WP_001273649.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273649.1;locus_tag=CCO47_RS09265;product=phage baseplate assembly protein V;protein_id=WP_001273649.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1925042 1925455 . + . ID=gene-CCO47_RS09270;Name=CCO47_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09270;old_locus_tag=CCO47_09270 NZ_CP075113.1 Protein Homology CDS 1925042 1925455 . + 0 ID=cds-WP_000605050.1;Parent=gene-CCO47_RS09270;Dbxref=GenBank:WP_000605050.1;Name=WP_000605050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000605050.1;locus_tag=CCO47_RS09270;product=phage GP46 family protein;protein_id=WP_000605050.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1925448 1926527 . + . ID=gene-CCO47_RS09275;Name=CCO47_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09275;old_locus_tag=CCO47_09275 NZ_CP075113.1 Protein Homology CDS 1925448 1926527 . + 0 ID=cds-WP_000785580.1;Parent=gene-CCO47_RS09275;Dbxref=GenBank:WP_000785580.1;Name=WP_000785580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000785580.1;locus_tag=CCO47_RS09275;product=baseplate J/gp47 family protein;protein_id=WP_000785580.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1926530 1927117 . + . ID=gene-CCO47_RS09280;Name=CCO47_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09280;old_locus_tag=CCO47_09280 NZ_CP075113.1 Protein Homology CDS 1926530 1927117 . + 0 ID=cds-WP_001207832.1;Parent=gene-CCO47_RS09280;Dbxref=GenBank:WP_001207832.1;Name=WP_001207832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001207831.1;locus_tag=CCO47_RS09280;product=YmfQ family protein;protein_id=WP_001207832.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1927104 1928666 . + . ID=gene-CCO47_RS09285;Name=CCO47_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09285;old_locus_tag=CCO47_09285 NZ_CP075113.1 Protein Homology CDS 1927104 1928666 . + 0 ID=cds-WP_000554737.1;Parent=gene-CCO47_RS09285;Dbxref=GenBank:WP_000554737.1;Name=WP_000554737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000554736.1;locus_tag=CCO47_RS09285;product=hypothetical protein;protein_id=WP_000554737.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1928636 1929235 . + . ID=gene-CCO47_RS09290;Name=CCO47_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09290;old_locus_tag=CCO47_09290 NZ_CP075113.1 Protein Homology CDS 1928636 1929235 . + 0 ID=cds-WP_015701331.1;Parent=gene-CCO47_RS09290;Dbxref=GenBank:WP_015701331.1;Name=WP_015701331.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015701331.1;locus_tag=CCO47_RS09290;product=tail fiber assembly protein;protein_id=WP_015701331.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1929370 1929492 . + . ID=gene-CCO47_RS24140;Name=CCO47_RS24140;end_range=1929492,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24140;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 1929370 1929492 . + 0 ID=cds-CCO47_RS24140;Parent=gene-CCO47_RS24140;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1929492,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505045.1;locus_tag=CCO47_RS24140;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1929520 1930527 . - . ID=gene-CCO47_RS09295;Name=sseK3;gbkey=Gene;gene=sseK3;gene_biotype=protein_coding;locus_tag=CCO47_RS09295;old_locus_tag=CCO47_09295 NZ_CP075113.1 Protein Homology CDS 1929520 1930527 . - 0 ID=cds-WP_000492926.1;Parent=gene-CCO47_RS09295;Dbxref=GenBank:WP_000492926.1;Name=WP_000492926.1;gbkey=CDS;gene=sseK3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000492926.1;locus_tag=CCO47_RS09295;product=type III secretion system effector arginine glycosyltransferase SseK3;protein_id=WP_000492926.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1930758 1930961 . + . ID=gene-CCO47_RS09300;Name=CCO47_RS09300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS09300;old_locus_tag=CCO47_09300;partial=true;pseudo=true;start_range=.,1930758 NZ_CP075113.1 Protein Homology CDS 1930758 1930961 . + 0 ID=cds-CCO47_RS09300;Parent=gene-CCO47_RS09300;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308311.1;locus_tag=CCO47_RS09300;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,1930758;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1931580 1931690 . + . ID=gene-CCO47_RS24545;Name=CCO47_RS24545;end_range=1931690,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24545;partial=true;pseudo=true;start_range=.,1931580 NZ_CP075113.1 Protein Homology CDS 1931580 1931690 . + 0 ID=cds-CCO47_RS24545;Parent=gene-CCO47_RS24545;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1931690,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830395.1;locus_tag=CCO47_RS24545;partial=true;product=DUF6387 family protein;pseudo=true;start_range=.,1931580;transl_table=11 NZ_CP075113.1 RefSeq gene 1932304 1933122 . + . ID=gene-CCO47_RS09305;Name=CCO47_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09305;old_locus_tag=CCO47_09305 NZ_CP075113.1 Protein Homology CDS 1932304 1933122 . + 0 ID=cds-WP_001176778.1;Parent=gene-CCO47_RS09305;Dbxref=GenBank:WP_001176778.1;Name=WP_001176778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176774.1;locus_tag=CCO47_RS09305;product=hypothetical protein;protein_id=WP_001176778.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1933383 1933514 . - . ID=gene-CCO47_RS09310;Name=CCO47_RS09310;end_range=1933514,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS09310;old_locus_tag=CCO47_09310;partial=true;pseudo=true;start_range=.,1933383 NZ_CP075113.1 Protein Homology CDS 1933383 1933514 . - 0 ID=cds-CCO47_RS09310;Parent=gene-CCO47_RS09310;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1933514,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611496.1;locus_tag=CCO47_RS09310;partial=true;product=transposase;pseudo=true;start_range=.,1933383;transl_table=11 NZ_CP075113.1 RefSeq gene 1933584 1934606 . + . ID=gene-CCO47_RS09315;Name=CCO47_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09315;old_locus_tag=CCO47_09315 NZ_CP075113.1 Protein Homology CDS 1933584 1934606 . + 0 ID=cds-WP_001028173.1;Parent=gene-CCO47_RS09315;Dbxref=GenBank:WP_001028173.1;Name=WP_001028173.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001028172.1;locus_tag=CCO47_RS09315;product=IS110-like element ISSaen1 family transposase;protein_id=WP_001028173.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1934812 1934928 . - . ID=gene-CCO47_RS09320;Name=CCO47_RS09320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS09320;old_locus_tag=CCO47_09320;partial=true;pseudo=true;start_range=.,1934812 NZ_CP075113.1 Protein Homology CDS 1934812 1934928 . - 0 ID=cds-CCO47_RS09320;Parent=gene-CCO47_RS09320;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611505.1;locus_tag=CCO47_RS09320;partial=true;product=transposase;pseudo=true;start_range=.,1934812;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1935011 1935109 . - . ID=gene-CCO47_RS24145;Name=CCO47_RS24145;end_range=1935109,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24145;partial=true;pseudo=true;start_range=.,1935011 NZ_CP075113.1 Protein Homology CDS 1935011 1935109 . - 0 ID=cds-CCO47_RS24145;Parent=gene-CCO47_RS24145;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1935109,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001607533.1;locus_tag=CCO47_RS24145;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,1935011;transl_table=11 NZ_CP075113.1 RefSeq gene 1935358 1935565 . - . ID=gene-CCO47_RS09325;Name=CCO47_RS09325;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO47_RS09325;old_locus_tag=CCO47_09325 NZ_CP075113.1 cmsearch ncRNA 1935358 1935565 . - . ID=rna-CCO47_RS09325;Parent=gene-CCO47_RS09325;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS09325;product=RtT sRNA NZ_CP075113.1 cmsearch exon 1935358 1935565 . - . ID=exon-CCO47_RS09325-1;Parent=rna-CCO47_RS09325;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS09325;product=RtT sRNA NZ_CP075113.1 RefSeq gene 1935616 1935751 . - . ID=gene-CCO47_RS09330;Name=CCO47_RS09330;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO47_RS09330;old_locus_tag=CCO47_09330 NZ_CP075113.1 cmsearch ncRNA 1935616 1935751 . - . ID=rna-CCO47_RS09330;Parent=gene-CCO47_RS09330;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS09330;product=RtT sRNA NZ_CP075113.1 cmsearch exon 1935616 1935751 . - . ID=exon-CCO47_RS09330-1;Parent=rna-CCO47_RS09330;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS09330;product=RtT sRNA NZ_CP075113.1 RefSeq gene 1935800 1935887 . - . ID=gene-CCO47_RS09335;Name=CCO47_RS09335;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS09335;old_locus_tag=CCO47_09335 NZ_CP075113.1 tRNAscan-SE tRNA 1935800 1935887 . - . ID=rna-CCO47_RS09335;Parent=gene-CCO47_RS09335;anticodon=(pos:complement(1935851..1935853));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS09335;product=tRNA-Ser NZ_CP075113.1 tRNAscan-SE exon 1935800 1935887 . - . ID=exon-CCO47_RS09335-1;Parent=rna-CCO47_RS09335;anticodon=(pos:complement(1935851..1935853));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS09335;product=tRNA-Ser NZ_CP075113.1 RefSeq gene 1936123 1937061 . + . ID=gene-CCO47_RS09340;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=CCO47_RS09340;old_locus_tag=CCO47_09340 NZ_CP075113.1 Protein Homology CDS 1936123 1937061 . + 0 ID=cds-WP_000402545.1;Parent=gene-CCO47_RS09340;Dbxref=GenBank:WP_000402545.1;Name=WP_000402545.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=CCO47_RS09340;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_000402545.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1937146 1937883 . + . ID=gene-CCO47_RS09345;Name=CCO47_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09345;old_locus_tag=CCO47_09345 NZ_CP075113.1 Protein Homology CDS 1937146 1937883 . + 0 ID=cds-WP_000283643.1;Parent=gene-CCO47_RS09345;Dbxref=GenBank:WP_000283643.1;Name=WP_000283643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460107.1;locus_tag=CCO47_RS09345;product=phosphatase;protein_id=WP_000283643.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1937907 1938461 . + . ID=gene-CCO47_RS09350;Name=CCO47_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09350;old_locus_tag=CCO47_09350 NZ_CP075113.1 Protein Homology CDS 1937907 1938461 . + 0 ID=cds-WP_001001883.1;Parent=gene-CCO47_RS09350;Dbxref=GenBank:WP_001001883.1;Name=WP_001001883.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460108.1;locus_tag=CCO47_RS09350;product=TorD/DmsD family molecular chaperone;protein_id=WP_001001883.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1938562 1939044 . + . ID=gene-CCO47_RS09355;Name=CCO47_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09355;old_locus_tag=CCO47_09355 NZ_CP075113.1 Protein Homology CDS 1938562 1939044 . + 0 ID=cds-WP_001675581.1;Parent=gene-CCO47_RS09355;Dbxref=GenBank:WP_001675581.1;Name=WP_001675581.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675581.1;locus_tag=CCO47_RS09355;product=DUF1097 domain-containing protein;protein_id=WP_001675581.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1939083 1939916 . - . ID=gene-CCO47_RS09360;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=CCO47_RS09360;old_locus_tag=CCO47_09360 NZ_CP075113.1 Protein Homology CDS 1939083 1939916 . - 0 ID=cds-WP_001137620.1;Parent=gene-CCO47_RS09360;Dbxref=GenBank:WP_001137620.1;Name=WP_001137620.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460110.1;locus_tag=CCO47_RS09360;product=curli production assembly/transport protein CsgG;protein_id=WP_001137620.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1939943 1940359 . - . ID=gene-CCO47_RS09365;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=CCO47_RS09365;old_locus_tag=CCO47_09365 NZ_CP075113.1 Protein Homology CDS 1939943 1940359 . - 0 ID=cds-WP_001264073.1;Parent=gene-CCO47_RS09365;Dbxref=GenBank:WP_001264073.1;Name=WP_001264073.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460111.1;locus_tag=CCO47_RS09365;product=curli production assembly/transport protein CsgF;protein_id=WP_001264073.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1940386 1940781 . - . ID=gene-CCO47_RS09370;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=CCO47_RS09370;old_locus_tag=CCO47_09370 NZ_CP075113.1 Protein Homology CDS 1940386 1940781 . - 0 ID=cds-WP_000833309.1;Parent=gene-CCO47_RS09370;Dbxref=GenBank:WP_000833309.1;Name=WP_000833309.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460112.1;locus_tag=CCO47_RS09370;product=curli production assembly/transport protein CsgE;protein_id=WP_000833309.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1940786 1941436 . - . ID=gene-CCO47_RS09375;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=CCO47_RS09375;old_locus_tag=CCO47_09375 NZ_CP075113.1 Protein Homology CDS 1940786 1941436 . - 0 ID=cds-WP_000481517.1;Parent=gene-CCO47_RS09375;Dbxref=GenBank:WP_000481517.1;Name=WP_000481517.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460113.1;locus_tag=CCO47_RS09375;product=biofilm master transcriptional regulator CsgD;protein_id=WP_000481517.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1942191 1942646 . + . ID=gene-CCO47_RS09380;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=CCO47_RS09380;old_locus_tag=CCO47_09380 NZ_CP075113.1 Protein Homology CDS 1942191 1942646 . + 0 ID=cds-WP_000791655.1;Parent=gene-CCO47_RS09380;Dbxref=GenBank:WP_000791655.1;Name=WP_000791655.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460114.1;locus_tag=CCO47_RS09380;product=curli minor subunit CsgB;protein_id=WP_000791655.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1942688 1943143 . + . ID=gene-CCO47_RS09385;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=CCO47_RS09385;old_locus_tag=CCO47_09385 NZ_CP075113.1 Protein Homology CDS 1942688 1943143 . + 0 ID=cds-WP_000771416.1;Parent=gene-CCO47_RS09385;Dbxref=GenBank:WP_000771416.1;Name=WP_000771416.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460115.1;locus_tag=CCO47_RS09385;product=curli major subunit CsgA;protein_id=WP_000771416.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1943205 1943531 . + . ID=gene-CCO47_RS09390;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=CCO47_RS09390;old_locus_tag=CCO47_09390 NZ_CP075113.1 Protein Homology CDS 1943205 1943531 . + 0 ID=cds-WP_000557256.1;Parent=gene-CCO47_RS09390;Dbxref=GenBank:WP_000557256.1;Name=WP_000557256.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460116.1;locus_tag=CCO47_RS09390;product=curli assembly chaperone CsgC;protein_id=WP_000557256.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1943662 1943982 . + . ID=gene-CCO47_RS09395;Name=CCO47_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09395;old_locus_tag=CCO47_09395 NZ_CP075113.1 Protein Homology CDS 1943662 1943982 . + 0 ID=cds-WP_000111257.1;Parent=gene-CCO47_RS09395;Dbxref=GenBank:WP_000111257.1;Name=WP_000111257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460117.1;locus_tag=CCO47_RS09395;product=YmdA family protein;protein_id=WP_000111257.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1944069 1944608 . + . ID=gene-CCO47_RS09400;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=CCO47_RS09400;old_locus_tag=CCO47_09400 NZ_CP075113.1 Protein Homology CDS 1944069 1944608 . + 0 ID=cds-WP_000203944.1;Parent=gene-CCO47_RS09400;Dbxref=GenBank:WP_000203944.1;Name=WP_000203944.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=CCO47_RS09400;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_000203944.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1944544 1946031 . + . ID=gene-CCO47_RS09405;Name=CCO47_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09405;old_locus_tag=CCO47_09405 NZ_CP075113.1 Protein Homology CDS 1944544 1946031 . + 0 ID=cds-WP_000976323.1;Parent=gene-CCO47_RS09405;Dbxref=GenBank:WP_000976323.1;Name=WP_000976323.1;Ontology_term=GO:0032049,GO:0090483;gbkey=CDS;go_function=phosphatidylglycerol-phosphatidylethanolamine phosphatidyltransferase activity|0090483||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=CCO47_RS09405;product=phospholipase D family protein;protein_id=WP_000976323.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1946048 1947202 . - . ID=gene-CCO47_RS09410;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=CCO47_RS09410;old_locus_tag=CCO47_09410 NZ_CP075113.1 Protein Homology CDS 1946048 1947202 . - 0 ID=cds-WP_000100071.1;Parent=gene-CCO47_RS09410;Dbxref=GenBank:WP_000100071.1;Name=WP_000100071.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460120.1;locus_tag=CCO47_RS09410;product=glucans biosynthesis protein MdoC;protein_id=WP_000100071.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1947474 1949009 . + . ID=gene-CCO47_RS09415;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=CCO47_RS09415;old_locus_tag=CCO47_09415 NZ_CP075113.1 Protein Homology CDS 1947474 1949009 . + 0 ID=cds-WP_001675580.1;Parent=gene-CCO47_RS09415;Dbxref=GenBank:WP_001675580.1;Name=WP_001675580.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460121.1;locus_tag=CCO47_RS09415;product=glucans biosynthesis protein MdoG;protein_id=WP_001675580.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1949002 1951545 . + . ID=gene-CCO47_RS09420;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=CCO47_RS09420;old_locus_tag=CCO47_09420 NZ_CP075113.1 Protein Homology CDS 1949002 1951545 . + 0 ID=cds-WP_001044610.1;Parent=gene-CCO47_RS09420;Dbxref=GenBank:WP_001044610.1;Name=WP_001044610.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460122.1;locus_tag=CCO47_RS09420;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_001044610.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1951619 1951846 . + . ID=gene-CCO47_RS09425;Name=CCO47_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09425;old_locus_tag=CCO47_09425 NZ_CP075113.1 Protein Homology CDS 1951619 1951846 . + 0 ID=cds-WP_001217832.1;Parent=gene-CCO47_RS09425;Dbxref=GenBank:WP_001217832.1;Name=WP_001217832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460123.1;locus_tag=CCO47_RS09425;product=YceK/YidQ family lipoprotein;protein_id=WP_001217832.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1951847 1952221 . - . ID=gene-CCO47_RS09430;Name=CCO47_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09430;old_locus_tag=CCO47_09430 NZ_CP075113.1 Protein Homology CDS 1951847 1952221 . - 0 ID=cds-WP_000180050.1;Parent=gene-CCO47_RS09430;Dbxref=GenBank:WP_000180050.1;Name=WP_000180050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460124.1;locus_tag=CCO47_RS09430;product=MysB family protein;protein_id=WP_000180050.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1952303 1953517 . - . ID=gene-CCO47_RS09435;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=CCO47_RS09435;old_locus_tag=CCO47_09435 NZ_CP075113.1 Protein Homology CDS 1952303 1953517 . - 0 ID=cds-WP_000075044.1;Parent=gene-CCO47_RS09435;Dbxref=GenBank:WP_000075044.1;Name=WP_000075044.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460125.1;locus_tag=CCO47_RS09435;product=multidrug efflux MFS transporter MdtG;protein_id=WP_000075044.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1953672 1954592 . - . ID=gene-CCO47_RS09440;Name=CCO47_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09440;old_locus_tag=CCO47_09440 NZ_CP075113.1 Protein Homology CDS 1953672 1954592 . - 0 ID=cds-WP_000163977.1;Parent=gene-CCO47_RS09440;Dbxref=GenBank:WP_000163977.1;Name=WP_000163977.1;Ontology_term=GO:0036104,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460126.1;locus_tag=CCO47_RS09440;product=Kdo(2)-lipid IV(A) acyltransferase;protein_id=WP_000163977.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1954812 1955864 . + . ID=gene-CCO47_RS09445;Name=trhO;gbkey=Gene;gene=trhO;gene_biotype=protein_coding;gene_synonym=yceA;locus_tag=CCO47_RS09445;old_locus_tag=CCO47_09445 NZ_CP075113.1 Protein Homology CDS 1954812 1955864 . + 0 ID=cds-WP_001144637.1;Parent=gene-CCO47_RS09445;Dbxref=GenBank:WP_001144637.1;Name=WP_001144637.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhO;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460127.1;locus_tag=CCO47_RS09445;product=oxygen-dependent tRNA uridine(34) hydroxylase TrhO;protein_id=WP_001144637.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1955916 1956491 . - . ID=gene-CCO47_RS09450;Name=CCO47_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09450;old_locus_tag=CCO47_09450 NZ_CP075113.1 Protein Homology CDS 1955916 1956491 . - 0 ID=cds-WP_000739886.1;Parent=gene-CCO47_RS09450;Dbxref=GenBank:WP_000739886.1;Name=WP_000739886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460128.1;locus_tag=CCO47_RS09450;product=YceI family protein;protein_id=WP_000739886.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1956488 1957060 . - . ID=gene-CCO47_RS09455;Name=CCO47_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09455;old_locus_tag=CCO47_09455 NZ_CP075113.1 Protein Homology CDS 1956488 1957060 . - 0 ID=cds-WP_001159784.1;Parent=gene-CCO47_RS09455;Dbxref=GenBank:WP_001159784.1;Name=WP_001159784.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=CCO47_RS09455;product=cytochrome b;protein_id=WP_001159784.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1957323 1957436 . - . ID=gene-CCO47_RS09460;Name=CCO47_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09460;old_locus_tag=CCO47_09460 NZ_CP075113.1 Protein Homology CDS 1957323 1957436 . - 0 ID=cds-WP_001253282.1;Parent=gene-CCO47_RS09460;Dbxref=GenBank:WP_001253282.1;Name=WP_001253282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460130.1;locus_tag=CCO47_RS09460;product=YceO family protein;protein_id=WP_001253282.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1957477 1958595 . - . ID=gene-CCO47_RS09465;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=CCO47_RS09465;old_locus_tag=CCO47_09465 NZ_CP075113.1 Protein Homology CDS 1957477 1958595 . - 0 ID=cds-WP_000872758.1;Parent=gene-CCO47_RS09465;Dbxref=GenBank:WP_000872758.1;Name=WP_000872758.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460131.1;locus_tag=CCO47_RS09465;product=N-methyl-L-tryptophan oxidase;protein_id=WP_000872758.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1958708 1958962 . - . ID=gene-CCO47_RS09470;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=CCO47_RS09470;old_locus_tag=CCO47_09470 NZ_CP075113.1 Protein Homology CDS 1958708 1958962 . - 0 ID=cds-WP_000414441.1;Parent=gene-CCO47_RS09470;Dbxref=GenBank:WP_000414441.1;Name=WP_000414441.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=CCO47_RS09470;product=biofilm formation regulator BssS;protein_id=WP_000414441.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1959252 1959497 . - . ID=gene-CCO47_RS09475;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=CCO47_RS09475;old_locus_tag=CCO47_09475 NZ_CP075113.1 Protein Homology CDS 1959252 1959497 . - 0 ID=cds-WP_001217763.1;Parent=gene-CCO47_RS09475;Dbxref=GenBank:WP_001217763.1;Name=WP_001217763.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=CCO47_RS09475;product=DNA damage-inducible protein I;protein_id=WP_001217763.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1959571 1960617 . - . ID=gene-CCO47_RS09480;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=CCO47_RS09480;old_locus_tag=CCO47_09480 NZ_CP075113.1 Protein Homology CDS 1959571 1960617 . - 0 ID=cds-WP_000126602.1;Parent=gene-CCO47_RS09480;Dbxref=GenBank:WP_000126602.1;Name=WP_000126602.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=CCO47_RS09480;product=dihydroorotase;protein_id=WP_000126602.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1960722 1961282 . - . ID=gene-CCO47_RS09485;Name=CCO47_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09485;old_locus_tag=CCO47_09485 NZ_CP075113.1 Protein Homology CDS 1960722 1961282 . - 0 ID=cds-WP_000713057.1;Parent=gene-CCO47_RS09485;Dbxref=GenBank:WP_000713057.1;Name=WP_000713057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460135.1;locus_tag=CCO47_RS09485;product=lipoprotein;protein_id=WP_000713057.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1961407 1962054 . - . ID=gene-CCO47_RS09490;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=CCO47_RS09490;old_locus_tag=CCO47_09490 NZ_CP075113.1 Protein Homology CDS 1961407 1962054 . - 0 ID=cds-WP_094912296.1;Parent=gene-CCO47_RS09490;Dbxref=GenBank:WP_094912296.1;Name=WP_094912296.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460136.1;locus_tag=CCO47_RS09490;product=glutaredoxin 2;protein_id=WP_094912296.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1962118 1963326 . - . ID=gene-CCO47_RS09495;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=CCO47_RS09495;old_locus_tag=CCO47_09495 NZ_CP075113.1 Protein Homology CDS 1962118 1963326 . - 0 ID=cds-WP_000092178.1;Parent=gene-CCO47_RS09495;Dbxref=GenBank:WP_000092178.1;Name=WP_000092178.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=CCO47_RS09495;product=multidrug efflux MFS transporter MdtH;protein_id=WP_000092178.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1963563 1964147 . + . ID=gene-CCO47_RS09500;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=CCO47_RS09500;old_locus_tag=CCO47_09500 NZ_CP075113.1 Protein Homology CDS 1963563 1964147 . + 0 ID=cds-WP_000468204.1;Parent=gene-CCO47_RS09500;Dbxref=GenBank:WP_000468204.1;Name=WP_000468204.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=CCO47_RS09500;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468204.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1964183 1964830 . + . ID=gene-CCO47_RS09505;Name=CCO47_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09505;old_locus_tag=CCO47_09505 NZ_CP075113.1 Protein Homology CDS 1964183 1964830 . + 0 ID=cds-WP_000873047.1;Parent=gene-CCO47_RS09505;Dbxref=GenBank:WP_000873047.1;Name=WP_000873047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460139.1;locus_tag=CCO47_RS09505;product=YceH family protein;protein_id=WP_000873047.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1964832 1965755 . + . ID=gene-CCO47_RS09510;Name=CCO47_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09510;old_locus_tag=CCO47_09510 NZ_CP075113.1 Protein Homology CDS 1964832 1965755 . + 0 ID=cds-WP_001259729.1;Parent=gene-CCO47_RS09510;Dbxref=GenBank:WP_001259729.1;Name=WP_001259729.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460140.1;locus_tag=CCO47_RS09510;product=Gfo/Idh/MocA family protein;protein_id=WP_001259729.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1966059 1967594 . + . ID=gene-CCO47_RS09515;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=CCO47_RS09515;old_locus_tag=CCO47_09515 NZ_CP075113.1 Protein Homology CDS 1966059 1967594 . + 0 ID=cds-WP_001537775.1;Parent=gene-CCO47_RS09515;Dbxref=GenBank:WP_001537775.1;Name=WP_001537775.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226258.1;locus_tag=CCO47_RS09515;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_001537775.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1967676 1968098 . - . ID=gene-CCO47_RS09520;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=CCO47_RS09520;old_locus_tag=CCO47_09520 NZ_CP075113.1 Protein Homology CDS 1967676 1968098 . - 0 ID=cds-WP_000197547.1;Parent=gene-CCO47_RS09520;Dbxref=GenBank:WP_000197547.1;Name=WP_000197547.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460142.1;locus_tag=CCO47_RS09520;product=flagella biosynthesis chaperone FlgN;protein_id=WP_000197547.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1968103 1968396 . - . ID=gene-CCO47_RS09525;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=CCO47_RS09525;old_locus_tag=CCO47_09525 NZ_CP075113.1 Protein Homology CDS 1968103 1968396 . - 0 ID=cds-WP_000020893.1;Parent=gene-CCO47_RS09525;Dbxref=GenBank:WP_000020893.1;Name=WP_000020893.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460143.1;locus_tag=CCO47_RS09525;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000020893.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1968488 1969147 . - . ID=gene-CCO47_RS09530;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=CCO47_RS09530;old_locus_tag=CCO47_09530 NZ_CP075113.1 Protein Homology CDS 1968488 1969147 . - 0 ID=cds-WP_001194086.1;Parent=gene-CCO47_RS09530;Dbxref=GenBank:WP_001194086.1;Name=WP_001194086.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460144.1;locus_tag=CCO47_RS09530;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_001194086.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1969304 1969720 . + . ID=gene-CCO47_RS09535;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=CCO47_RS09535;old_locus_tag=CCO47_09535 NZ_CP075113.1 Protein Homology CDS 1969304 1969720 . + 0 ID=cds-WP_000887043.1;Parent=gene-CCO47_RS09535;Dbxref=GenBank:WP_000887043.1;Name=WP_000887043.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460145.1;locus_tag=CCO47_RS09535;product=flagellar basal body rod protein FlgB;protein_id=WP_000887043.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1969724 1970128 . + . ID=gene-CCO47_RS09540;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=CCO47_RS09540;old_locus_tag=CCO47_09540 NZ_CP075113.1 Protein Homology CDS 1969724 1970128 . + 0 ID=cds-WP_001196448.1;Parent=gene-CCO47_RS09540;Dbxref=GenBank:WP_001196448.1;Name=WP_001196448.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=CCO47_RS09540;product=flagellar basal body rod protein FlgC;protein_id=WP_001196448.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1970140 1970838 . + . ID=gene-CCO47_RS09545;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=CCO47_RS09545;old_locus_tag=CCO47_09545 NZ_CP075113.1 Protein Homology CDS 1970140 1970838 . + 0 ID=cds-WP_000020450.1;Parent=gene-CCO47_RS09545;Dbxref=GenBank:WP_000020450.1;Name=WP_000020450.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460147.1;locus_tag=CCO47_RS09545;product=flagellar hook assembly protein FlgD;protein_id=WP_000020450.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1970865 1972076 . + . ID=gene-CCO47_RS09550;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=CCO47_RS09550;old_locus_tag=CCO47_09550 NZ_CP075113.1 Protein Homology CDS 1970865 1972076 . + 0 ID=cds-WP_000010567.1;Parent=gene-CCO47_RS09550;Dbxref=GenBank:WP_000010567.1;Name=WP_000010567.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460148.1;locus_tag=CCO47_RS09550;product=flagellar hook protein FlgE;protein_id=WP_000010567.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1972097 1972852 . + . ID=gene-CCO47_RS09555;Name=CCO47_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09555;old_locus_tag=CCO47_09555 NZ_CP075113.1 Protein Homology CDS 1972097 1972852 . + 0 ID=cds-WP_000349278.1;Parent=gene-CCO47_RS09555;Dbxref=GenBank:WP_000349278.1;Name=WP_000349278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=CCO47_RS09555;product=flagellar basal body rod protein FlgF;protein_id=WP_000349278.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1972866 1973648 . + . ID=gene-CCO47_RS09560;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=CCO47_RS09560;old_locus_tag=CCO47_09560 NZ_CP075113.1 Protein Homology CDS 1972866 1973648 . + 0 ID=cds-WP_000625859.1;Parent=gene-CCO47_RS09560;Dbxref=GenBank:WP_000625859.1;Name=WP_000625859.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=CCO47_RS09560;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625859.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1973703 1974401 . + . ID=gene-CCO47_RS09565;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=CCO47_RS09565;old_locus_tag=CCO47_09565 NZ_CP075113.1 Protein Homology CDS 1973703 1974401 . + 0 ID=cds-WP_001174897.1;Parent=gene-CCO47_RS09565;Dbxref=GenBank:WP_001174897.1;Name=WP_001174897.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460151.1;locus_tag=CCO47_RS09565;product=flagellar basal body L-ring protein FlgH;protein_id=WP_001174897.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1974413 1975510 . + . ID=gene-CCO47_RS09570;Name=CCO47_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09570;old_locus_tag=CCO47_09570 NZ_CP075113.1 Protein Homology CDS 1974413 1975510 . + 0 ID=cds-WP_001518955.1;Parent=gene-CCO47_RS09570;Dbxref=GenBank:WP_001518955.1;Name=WP_001518955.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460152.1;locus_tag=CCO47_RS09570;product=flagellar basal body P-ring protein FlgI;protein_id=WP_001518955.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1975510 1976460 . + . ID=gene-CCO47_RS09575;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=CCO47_RS09575;old_locus_tag=CCO47_09575 NZ_CP075113.1 Protein Homology CDS 1975510 1976460 . + 0 ID=cds-WP_000578685.1;Parent=gene-CCO47_RS09575;Dbxref=GenBank:WP_000578685.1;Name=WP_000578685.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460153.1;locus_tag=CCO47_RS09575;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_000578685.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1976525 1978186 . + . ID=gene-CCO47_RS09580;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=CCO47_RS09580;old_locus_tag=CCO47_09580 NZ_CP075113.1 Protein Homology CDS 1976525 1978186 . + 0 ID=cds-WP_000096425.1;Parent=gene-CCO47_RS09580;Dbxref=GenBank:WP_000096425.1;Name=WP_000096425.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460154.1;locus_tag=CCO47_RS09580;product=flagellar hook-associated protein FlgK;protein_id=WP_000096425.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1978201 1979154 . + . ID=gene-CCO47_RS09585;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=CCO47_RS09585;old_locus_tag=CCO47_09585 NZ_CP075113.1 Protein Homology CDS 1978201 1979154 . + 0 ID=cds-WP_001223032.1;Parent=gene-CCO47_RS09585;Dbxref=GenBank:WP_001223032.1;Name=WP_001223032.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=CCO47_RS09585;product=flagellar hook-associated protein FlgL;protein_id=WP_001223032.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1979411 1982617 . - . ID=gene-CCO47_RS09590;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=CCO47_RS09590;old_locus_tag=CCO47_09590 NZ_CP075113.1 Protein Homology CDS 1979411 1982617 . - 0 ID=cds-WP_000827454.1;Parent=gene-CCO47_RS09590;Dbxref=GenBank:WP_000827454.1;Name=WP_000827454.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=CCO47_RS09590;product=ribonuclease E;protein_id=WP_000827454.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1983191 1984150 . + . ID=gene-CCO47_RS09595;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=CCO47_RS09595;old_locus_tag=CCO47_09595 NZ_CP075113.1 Protein Homology CDS 1983191 1984150 . + 0 ID=cds-WP_000846319.1;Parent=gene-CCO47_RS09595;Dbxref=GenBank:WP_000846319.1;Name=WP_000846319.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460157.1;locus_tag=CCO47_RS09595;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_000846319.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 1984306 1985048 . + . ID=gene-CCO47_RS09600;Name=CCO47_RS09600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS09600;old_locus_tag=CCO47_09600;pseudo=true NZ_CP075113.1 Protein Homology CDS 1984306 1985048 . + 0 ID=cds-CCO47_RS09600;Parent=gene-CCO47_RS09600;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460158.1;locus_tag=CCO47_RS09600;product=DUF3053 domain-containing protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 1985251 1985475 . + . ID=gene-CCO47_RS09605;Name=CCO47_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09605;old_locus_tag=CCO47_09605 NZ_CP075113.1 GeneMarkS-2+ CDS 1985251 1985475 . + 0 ID=cds-WP_000528430.1;Parent=gene-CCO47_RS09605;Dbxref=GenBank:WP_000528430.1;Name=WP_000528430.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO47_RS09605;product=hypothetical protein;protein_id=WP_000528430.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1985546 1986130 . - . ID=gene-CCO47_RS09610;Name=CCO47_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09610;old_locus_tag=CCO47_09610 NZ_CP075113.1 Protein Homology CDS 1985546 1986130 . - 0 ID=cds-WP_001137613.1;Parent=gene-CCO47_RS09610;Dbxref=GenBank:WP_001137613.1;Name=WP_001137613.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460159.1;locus_tag=CCO47_RS09610;product=Maf family protein;protein_id=WP_001137613.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1986328 1986849 . + . ID=gene-CCO47_RS09615;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=CCO47_RS09615;old_locus_tag=CCO47_09615 NZ_CP075113.1 Protein Homology CDS 1986328 1986849 . + 0 ID=cds-WP_001174492.1;Parent=gene-CCO47_RS09615;Dbxref=GenBank:WP_001174492.1;Name=WP_001174492.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=CCO47_RS09615;product=23S rRNA accumulation protein YceD;protein_id=WP_001174492.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1986901 1987074 . + . ID=gene-CCO47_RS09620;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=CCO47_RS09620;old_locus_tag=CCO47_09620 NZ_CP075113.1 Protein Homology CDS 1986901 1987074 . + 0 ID=cds-WP_000290727.1;Parent=gene-CCO47_RS09620;Dbxref=GenBank:WP_000290727.1;Name=WP_000290727.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=CCO47_RS09620;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1987208 1988287 . + . ID=gene-CCO47_RS09625;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=CCO47_RS09625;old_locus_tag=CCO47_09625 NZ_CP075113.1 Protein Homology CDS 1987208 1988287 . + 0 ID=cds-WP_001518286.1;Parent=gene-CCO47_RS09625;Dbxref=GenBank:WP_001518286.1;Name=WP_001518286.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460162.1;locus_tag=CCO47_RS09625;product=phosphate acyltransferase PlsX;protein_id=WP_001518286.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1988367 1989320 . + . ID=gene-CCO47_RS09630;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=CCO47_RS09630;old_locus_tag=CCO47_09630 NZ_CP075113.1 Protein Homology CDS 1988367 1989320 . + 0 ID=cds-WP_000288148.1;Parent=gene-CCO47_RS09630;Dbxref=GenBank:WP_000288148.1;Name=WP_000288148.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=CCO47_RS09630;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000288148.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1989336 1990265 . + . ID=gene-CCO47_RS09635;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=CCO47_RS09635;old_locus_tag=CCO47_09635 NZ_CP075113.1 Protein Homology CDS 1989336 1990265 . + 0 ID=cds-WP_000191342.1;Parent=gene-CCO47_RS09635;Dbxref=GenBank:WP_000191342.1;Name=WP_000191342.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460164.1;locus_tag=CCO47_RS09635;product=ACP S-malonyltransferase;protein_id=WP_000191342.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1990278 1991012 . + . ID=gene-CCO47_RS09640;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=CCO47_RS09640;old_locus_tag=CCO47_09640 NZ_CP075113.1 Protein Homology CDS 1990278 1991012 . + 0 ID=cds-WP_000007236.1;Parent=gene-CCO47_RS09640;Dbxref=GenBank:WP_000007236.1;Name=WP_000007236.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=CCO47_RS09640;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_000007236.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1991168 1991404 . + . ID=gene-CCO47_RS09645;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=CCO47_RS09645;old_locus_tag=CCO47_09645 NZ_CP075113.1 Protein Homology CDS 1991168 1991404 . + 0 ID=cds-WP_000103754.1;Parent=gene-CCO47_RS09645;Dbxref=GenBank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=CCO47_RS09645;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1991490 1992731 . + . ID=gene-CCO47_RS09650;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=CCO47_RS09650;old_locus_tag=CCO47_09650 NZ_CP075113.1 Protein Homology CDS 1991490 1992731 . + 0 ID=cds-WP_094912299.1;Parent=gene-CCO47_RS09650;Dbxref=GenBank:WP_094912299.1;Name=WP_094912299.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=CCO47_RS09650;product=beta-ketoacyl-ACP synthase II;protein_id=WP_094912299.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1992855 1993664 . + . ID=gene-CCO47_RS09655;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=CCO47_RS09655;old_locus_tag=CCO47_09655 NZ_CP075113.1 Protein Homology CDS 1992855 1993664 . + 0 ID=cds-WP_000478653.1;Parent=gene-CCO47_RS09655;Dbxref=GenBank:WP_000478653.1;Name=WP_000478653.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460168.1;locus_tag=CCO47_RS09655;product=aminodeoxychorismate lyase;protein_id=WP_000478653.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1993667 1994689 . + . ID=gene-CCO47_RS09660;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=CCO47_RS09660;old_locus_tag=CCO47_09660 NZ_CP075113.1 Protein Homology CDS 1993667 1994689 . + 0 ID=cds-WP_000736459.1;Parent=gene-CCO47_RS09660;Dbxref=GenBank:WP_000736459.1;Name=WP_000736459.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460169.1;locus_tag=CCO47_RS09660;product=cell division protein YceG;protein_id=WP_000736459.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1994679 1995320 . + . ID=gene-CCO47_RS09665;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=CCO47_RS09665;old_locus_tag=CCO47_09665 NZ_CP075113.1 Protein Homology CDS 1994679 1995320 . + 0 ID=cds-WP_000535399.1;Parent=gene-CCO47_RS09665;Dbxref=GenBank:WP_000535399.1;Name=WP_000535399.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460170.1;locus_tag=CCO47_RS09665;product=dTMP kinase;protein_id=WP_000535399.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1995317 1996321 . + . ID=gene-CCO47_RS09670;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=CCO47_RS09670;old_locus_tag=CCO47_09670 NZ_CP075113.1 Protein Homology CDS 1995317 1996321 . + 0 ID=cds-WP_000872450.1;Parent=gene-CCO47_RS09670;Dbxref=GenBank:WP_000872450.1;Name=WP_000872450.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460171.1;locus_tag=CCO47_RS09670;product=DNA polymerase III subunit delta';protein_id=WP_000872450.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1996332 1997129 . + . ID=gene-CCO47_RS09675;Name=CCO47_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09675;old_locus_tag=CCO47_09675 NZ_CP075113.1 Protein Homology CDS 1996332 1997129 . + 0 ID=cds-WP_000480277.1;Parent=gene-CCO47_RS09675;Dbxref=GenBank:WP_000480277.1;Name=WP_000480277.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460172.1;locus_tag=CCO47_RS09675;product=metal-dependent hydrolase;protein_id=WP_000480277.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1997424 1998857 . + . ID=gene-CCO47_RS09680;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=CCO47_RS09680;old_locus_tag=CCO47_09680 NZ_CP075113.1 Protein Homology CDS 1997424 1998857 . + 0 ID=cds-WP_000475705.1;Parent=gene-CCO47_RS09680;Dbxref=GenBank:WP_000475705.1;Name=WP_000475705.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460173.1;locus_tag=CCO47_RS09680;product=PTS glucose transporter subunit IIBC;protein_id=WP_000475705.1;transl_table=11 NZ_CP075113.1 RefSeq gene 1998942 2001116 . - . ID=gene-CCO47_RS09685;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=CCO47_RS09685;old_locus_tag=CCO47_09685 NZ_CP075113.1 Protein Homology CDS 1998942 2001116 . - 0 ID=cds-WP_000008401.1;Parent=gene-CCO47_RS09685;Dbxref=GenBank:WP_000008401.1;Name=WP_000008401.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=CCO47_RS09685;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WP_000008401.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2001458 2001817 . + . ID=gene-CCO47_RS09690;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=CCO47_RS09690;old_locus_tag=CCO47_09690 NZ_CP075113.1 Protein Homology CDS 2001458 2001817 . + 0 ID=cds-WP_001532068.1;Parent=gene-CCO47_RS09690;Dbxref=GenBank:WP_001532068.1;Name=WP_001532068.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460175.1;locus_tag=CCO47_RS09690;product=purine nucleoside phosphoramidase;protein_id=WP_001532068.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2001820 2002194 . + . ID=gene-CCO47_RS09695;Name=CCO47_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09695;old_locus_tag=CCO47_09695 NZ_CP075113.1 Protein Homology CDS 2001820 2002194 . + 0 ID=cds-WP_000589563.1;Parent=gene-CCO47_RS09695;Dbxref=GenBank:WP_000589563.1;Name=WP_000589563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460176.1;locus_tag=CCO47_RS09695;product=YcfL family putative periplasmic lipoprotein;protein_id=WP_000589563.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2002208 2002846 . + . ID=gene-CCO47_RS09700;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=CCO47_RS09700;old_locus_tag=CCO47_09700 NZ_CP075113.1 Protein Homology CDS 2002208 2002846 . + 0 ID=cds-WP_000164359.1;Parent=gene-CCO47_RS09700;Dbxref=GenBank:WP_000164359.1;Name=WP_000164359.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=CCO47_RS09700;product=penicillin-binding protein activator LpoB;protein_id=WP_000164359.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2002827 2003651 . + . ID=gene-CCO47_RS09705;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=CCO47_RS09705;old_locus_tag=CCO47_09705 NZ_CP075113.1 Protein Homology CDS 2002827 2003651 . + 0 ID=cds-WP_001257327.1;Parent=gene-CCO47_RS09705;Dbxref=GenBank:WP_001257327.1;Name=WP_001257327.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460178.1;locus_tag=CCO47_RS09705;product=thiamine kinase;protein_id=WP_001257327.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2003662 2004687 . + . ID=gene-CCO47_RS09710;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=CCO47_RS09710;old_locus_tag=CCO47_09710 NZ_CP075113.1 Protein Homology CDS 2003662 2004687 . + 0 ID=cds-WP_000529340.1;Parent=gene-CCO47_RS09710;Dbxref=GenBank:WP_000529340.1;Name=WP_000529340.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460179.1;locus_tag=CCO47_RS09710;product=beta-N-acetylhexosaminidase;protein_id=WP_000529340.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2004712 2005254 . + . ID=gene-CCO47_RS09715;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=CCO47_RS09715;old_locus_tag=CCO47_09715 NZ_CP075113.1 Protein Homology CDS 2004712 2005254 . + 0 ID=cds-WP_000587945.1;Parent=gene-CCO47_RS09715;Dbxref=GenBank:WP_000587945.1;Name=WP_000587945.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=CCO47_RS09715;product=alpha/beta hydrolase YcfP;protein_id=WP_000587945.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2005509 2006813 . + . ID=gene-CCO47_RS09720;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=CCO47_RS09720;old_locus_tag=CCO47_09720 NZ_CP075113.1 Protein Homology CDS 2005509 2006813 . + 0 ID=cds-WP_000211053.1;Parent=gene-CCO47_RS09720;Dbxref=GenBank:WP_000211053.1;Name=WP_000211053.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=CCO47_RS09720;product=NADH-quinone dehydrogenase;protein_id=WP_000211053.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2006992 2007531 . + . ID=gene-CCO47_RS09725;Name=CCO47_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09725;old_locus_tag=CCO47_09725 NZ_CP075113.1 Protein Homology CDS 2006992 2007531 . + 0 ID=cds-WP_001043452.1;Parent=gene-CCO47_RS09725;Dbxref=GenBank:WP_001043452.1;Name=WP_001043452.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460182.1;locus_tag=CCO47_RS09725;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043452.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2007605 2008240 . - . ID=gene-CCO47_RS09730;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=CCO47_RS09730;old_locus_tag=CCO47_09730 NZ_CP075113.1 Protein Homology CDS 2007605 2008240 . - 0 ID=cds-WP_000205991.1;Parent=gene-CCO47_RS09730;Dbxref=GenBank:WP_000205991.1;Name=WP_000205991.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460183.1;locus_tag=CCO47_RS09730;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_000205991.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2008482 2008739 . + . ID=gene-CCO47_RS09735;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=CCO47_RS09735;old_locus_tag=CCO47_09735 NZ_CP075113.1 Protein Homology CDS 2008482 2008739 . + 0 ID=cds-WP_000800134.1;Parent=gene-CCO47_RS09735;Dbxref=GenBank:WP_000800134.1;Name=WP_000800134.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460184.1;locus_tag=CCO47_RS09735;product=multiple stress resistance protein BhsA;protein_id=WP_000800134.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2008836 2009801 . - . ID=gene-CCO47_RS09740;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;locus_tag=CCO47_RS09740;old_locus_tag=CCO47_09740 NZ_CP075113.1 Protein Homology CDS 2008836 2009801 . - 0 ID=cds-WP_000482961.1;Parent=gene-CCO47_RS09740;Dbxref=GenBank:WP_000482961.1;Name=WP_000482961.1;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=CCO47_RS09740;product=L%2CD-transpeptidase LdtC;protein_id=WP_000482961.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2009949 2013395 . - . ID=gene-CCO47_RS09745;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=CCO47_RS09745;old_locus_tag=CCO47_09745 NZ_CP075113.1 Protein Homology CDS 2009949 2013395 . - 0 ID=cds-WP_001114337.1;Parent=gene-CCO47_RS09745;Dbxref=GenBank:WP_001114337.1;Name=WP_001114337.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=CCO47_RS09745;product=transcription-repair coupling factor;protein_id=WP_001114337.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2013733 2014932 . + . ID=gene-CCO47_RS09750;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=CCO47_RS09750;old_locus_tag=CCO47_09750 NZ_CP075113.1 Protein Homology CDS 2013733 2014932 . + 0 ID=cds-WP_001532069.1;Parent=gene-CCO47_RS09750;Dbxref=GenBank:WP_001532069.1;Name=WP_001532069.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=CCO47_RS09750;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_001532069.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2014925 2015626 . + . ID=gene-CCO47_RS09755;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=CCO47_RS09755;old_locus_tag=CCO47_09755 NZ_CP075113.1 Protein Homology CDS 2014925 2015626 . + 0 ID=cds-WP_001033714.1;Parent=gene-CCO47_RS09755;Dbxref=GenBank:WP_001033714.1;Name=WP_001033714.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460188.1;locus_tag=CCO47_RS09755;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033714.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2015626 2016870 . + . ID=gene-CCO47_RS09760;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=CCO47_RS09760;old_locus_tag=CCO47_09760 NZ_CP075113.1 Protein Homology CDS 2015626 2016870 . + 0 ID=cds-WP_000168092.1;Parent=gene-CCO47_RS09760;Dbxref=GenBank:WP_000168092.1;Name=WP_000168092.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=CCO47_RS09760;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_000168092.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2016899 2017810 . + . ID=gene-CCO47_RS09765;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=CCO47_RS09765;old_locus_tag=CCO47_09765 NZ_CP075113.1 Protein Homology CDS 2016899 2017810 . + 0 ID=cds-WP_000291339.1;Parent=gene-CCO47_RS09765;Dbxref=GenBank:WP_000291339.1;Name=WP_000291339.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460190.1;locus_tag=CCO47_RS09765;product=N-acetylglucosamine kinase;protein_id=WP_000291339.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2017829 2018650 . + . ID=gene-CCO47_RS09770;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=CCO47_RS09770;old_locus_tag=CCO47_09770 NZ_CP075113.1 Protein Homology CDS 2017829 2018650 . + 0 ID=cds-WP_001191856.1;Parent=gene-CCO47_RS09770;Dbxref=GenBank:WP_001191856.1;Name=WP_001191856.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=CCO47_RS09770;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_001191856.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2018732 2019778 . - . ID=gene-CCO47_RS09775;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=CCO47_RS09775;old_locus_tag=CCO47_09775 NZ_CP075113.1 Protein Homology CDS 2018732 2019778 . - 0 ID=cds-WP_000759329.1;Parent=gene-CCO47_RS09775;Dbxref=GenBank:WP_000759329.1;Name=WP_000759329.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=CCO47_RS09775;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_000759329.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2019803 2020582 . - . ID=gene-CCO47_RS09780;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=CCO47_RS09780;old_locus_tag=CCO47_09780 NZ_CP075113.1 Protein Homology CDS 2019803 2020582 . - 0 ID=cds-WP_000580295.1;Parent=gene-CCO47_RS09780;Dbxref=GenBank:WP_000580295.1;Name=WP_000580295.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460193.1;locus_tag=CCO47_RS09780;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580295.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2020898 2021908 . - . ID=gene-CCO47_RS09785;Name=sifA;gbkey=Gene;gene=sifA;gene_biotype=protein_coding;locus_tag=CCO47_RS09785;old_locus_tag=CCO47_09785 NZ_CP075113.1 Protein Homology CDS 2020898 2021908 . - 0 ID=cds-WP_001533329.1;Parent=gene-CCO47_RS09785;Dbxref=GenBank:WP_001533329.1;Name=WP_001533329.1;gbkey=CDS;gene=sifA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460194.1;locus_tag=CCO47_RS09785;product=SPI-2 type III secretion system effector SifA;protein_id=WP_001533329.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2022237 2023100 . - . ID=gene-CCO47_RS09790;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=CCO47_RS09790;old_locus_tag=CCO47_09790 NZ_CP075113.1 Protein Homology CDS 2022237 2023100 . - 0 ID=cds-WP_000799391.1;Parent=gene-CCO47_RS09790;Dbxref=GenBank:WP_000799391.1;Name=WP_000799391.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460195.1;locus_tag=CCO47_RS09790;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_000799391.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2023084 2024220 . - . ID=gene-CCO47_RS09795;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=CCO47_RS09795;old_locus_tag=CCO47_09795 NZ_CP075113.1 Protein Homology CDS 2023084 2024220 . - 0 ID=cds-WP_000531608.1;Parent=gene-CCO47_RS09795;Dbxref=GenBank:WP_000531608.1;Name=WP_000531608.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460196.1;locus_tag=CCO47_RS09795;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_000531608.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2024471 2025700 . + . ID=gene-CCO47_RS09800;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=CCO47_RS09800;old_locus_tag=CCO47_09800 NZ_CP075113.1 Protein Homology CDS 2024471 2025700 . + 0 ID=cds-WP_000359421.1;Parent=gene-CCO47_RS09800;Dbxref=GenBank:WP_000359421.1;Name=WP_000359421.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=CCO47_RS09800;product=peptidase T;protein_id=WP_000359421.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2025704 2027038 . + . ID=gene-CCO47_RS09805;Name=CCO47_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09805;old_locus_tag=CCO47_09805 NZ_CP075113.1 Protein Homology CDS 2025704 2027038 . + 0 ID=cds-WP_000944540.1;Parent=gene-CCO47_RS09805;Dbxref=GenBank:WP_000944540.1;Name=WP_000944540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460198.1;locus_tag=CCO47_RS09805;product=tetratricopeptide repeat protein;protein_id=WP_000944540.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2027078 2028199 . - . ID=gene-CCO47_RS09810;Name=CCO47_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09810;old_locus_tag=CCO47_09810 NZ_CP075113.1 Protein Homology CDS 2027078 2028199 . - 0 ID=cds-WP_000456501.1;Parent=gene-CCO47_RS09810;Dbxref=GenBank:WP_000456501.1;Name=WP_000456501.1;Ontology_term=GO:0043687,GO:0008198,GO:0016706;gbkey=CDS;go_function=ferrous iron binding|0008198||IEA,2-oxoglutarate-dependent dioxygenase activity|0016706||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460199.1;locus_tag=CCO47_RS09810;product=ribosomal protein uL16 3-hydroxylase;protein_id=WP_000456501.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2028280 2029743 . - . ID=gene-CCO47_RS09815;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=CCO47_RS09815;old_locus_tag=CCO47_09815 NZ_CP075113.1 Protein Homology CDS 2028280 2029743 . - 0 ID=cds-WP_001031687.1;Parent=gene-CCO47_RS09815;Dbxref=GenBank:WP_001031687.1;Name=WP_001031687.1;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460200.1;locus_tag=CCO47_RS09815;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_001031687.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2029743 2030414 . - . ID=gene-CCO47_RS09820;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=CCO47_RS09820;old_locus_tag=CCO47_09820 NZ_CP075113.1 Protein Homology CDS 2029743 2030414 . - 0 ID=cds-WP_001537766.1;Parent=gene-CCO47_RS09820;Dbxref=GenBank:WP_001537766.1;Name=WP_001537766.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=CCO47_RS09820;product=two-component system response regulator PhoP;protein_id=WP_001537766.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2030541 2031911 . - . ID=gene-CCO47_RS09825;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=CCO47_RS09825;old_locus_tag=CCO47_09825 NZ_CP075113.1 Protein Homology CDS 2030541 2031911 . - 0 ID=cds-WP_000423763.1;Parent=gene-CCO47_RS09825;Dbxref=GenBank:WP_000423763.1;Name=WP_000423763.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=CCO47_RS09825;product=adenylosuccinate lyase;protein_id=WP_000423763.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2031915 2032556 . - . ID=gene-CCO47_RS09830;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=CCO47_RS09830;old_locus_tag=CCO47_09830 NZ_CP075113.1 Protein Homology CDS 2031915 2032556 . - 0 ID=cds-WP_001675572.1;Parent=gene-CCO47_RS09830;Dbxref=GenBank:WP_001675572.1;Name=WP_001675572.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=CCO47_RS09830;product=high frequency lysogenization protein HflD;protein_id=WP_001675572.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2032643 2033749 . - . ID=gene-CCO47_RS09835;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=CCO47_RS09835;old_locus_tag=CCO47_09835 NZ_CP075113.1 Protein Homology CDS 2032643 2033749 . - 0 ID=cds-WP_000004540.1;Parent=gene-CCO47_RS09835;Dbxref=GenBank:WP_000004540.1;Name=WP_000004540.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309632.2;locus_tag=CCO47_RS09835;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_000004540.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2033803 2034264 . - . ID=gene-CCO47_RS09840;Name=CCO47_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09840;old_locus_tag=CCO47_09840 NZ_CP075113.1 Protein Homology CDS 2033803 2034264 . - 0 ID=cds-WP_000476072.1;Parent=gene-CCO47_RS09840;Dbxref=GenBank:WP_000476072.1;Name=WP_000476072.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460205.1;locus_tag=CCO47_RS09840;product=NUDIX hydrolase;protein_id=WP_000476072.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2034276 2034605 . - . ID=gene-CCO47_RS09845;Name=CCO47_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09845;old_locus_tag=CCO47_09845 NZ_CP075113.1 Protein Homology CDS 2034276 2034605 . - 0 ID=cds-WP_000825956.1;Parent=gene-CCO47_RS09845;Dbxref=GenBank:WP_000825956.1;Name=WP_000825956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460206.1;locus_tag=CCO47_RS09845;product=lysozyme inhibitor LprI family protein;protein_id=WP_000825956.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2034602 2035267 . - . ID=gene-CCO47_RS09850;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=CCO47_RS09850;old_locus_tag=CCO47_09850 NZ_CP075113.1 Protein Homology CDS 2034602 2035267 . - 0 ID=cds-WP_001249411.1;Parent=gene-CCO47_RS09850;Dbxref=GenBank:WP_001249411.1;Name=WP_001249411.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460207.1;locus_tag=CCO47_RS09850;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_001249411.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2035439 2036689 . + . ID=gene-CCO47_RS09855;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=CCO47_RS09855;old_locus_tag=CCO47_09855 NZ_CP075113.1 Protein Homology CDS 2035439 2036689 . + 0 ID=cds-WP_000444508.1;Parent=gene-CCO47_RS09855;Dbxref=GenBank:WP_000444508.1;Name=WP_000444508.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=CCO47_RS09855;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_000444508.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2037150 2038274 . + . ID=gene-CCO47_RS09860;Name=sopF;gbkey=Gene;gene=sopF;gene_biotype=protein_coding;locus_tag=CCO47_RS09860;old_locus_tag=CCO47_09860 NZ_CP075113.1 Protein Homology CDS 2037150 2038274 . + 0 ID=cds-WP_000917273.1;Parent=gene-CCO47_RS09860;Dbxref=GenBank:WP_000917273.1;Name=WP_000917273.1;gbkey=CDS;gene=sopF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460209.1;locus_tag=CCO47_RS09860;product=type III secretion system effector SopF;protein_id=WP_000917273.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2038737 2038943 . - . ID=gene-CCO47_RS24355;Name=CCO47_RS24355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24355 NZ_CP075113.1 Protein Homology CDS 2038737 2038943 . - 0 ID=cds-WP_000787625.1;Parent=gene-CCO47_RS24355;Dbxref=GenBank:WP_000787625.1;Name=WP_000787625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000787631.1;locus_tag=CCO47_RS24355;product=hypothetical protein;protein_id=WP_000787625.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2039265 2040053 . - . ID=gene-CCO47_RS09865;Name=envF;gbkey=Gene;gene=envF;gene_biotype=pseudogene;locus_tag=CCO47_RS09865;old_locus_tag=CCO47_09865;pseudo=true NZ_CP075113.1 Protein Homology CDS 2039265 2040053 . - 0 ID=cds-CCO47_RS09865;Parent=gene-CCO47_RS09865;Note=internal stop;gbkey=CDS;gene=envF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460210.1;locus_tag=CCO47_RS09865;product=putative envelope lipoprotein EnvF;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2040543 2040782 . - . ID=gene-CCO47_RS09870;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=CCO47_RS09870;old_locus_tag=CCO47_09870 NZ_CP075113.1 Protein Homology CDS 2040543 2040782 . - 0 ID=cds-WP_000497451.1;Parent=gene-CCO47_RS09870;Dbxref=GenBank:WP_000497451.1;Name=WP_000497451.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460211.1;locus_tag=CCO47_RS09870;product=virulence protein MsgA;protein_id=WP_000497451.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2040973 2041494 . - . ID=gene-CCO47_RS09875;Name=CCO47_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09875;old_locus_tag=CCO47_09875 NZ_CP075113.1 Protein Homology CDS 2040973 2041494 . - 0 ID=cds-WP_001532066.1;Parent=gene-CCO47_RS09875;Dbxref=GenBank:WP_001532066.1;Name=WP_001532066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460212.1;locus_tag=CCO47_RS09875;product=RICIN domain-containing protein;protein_id=WP_001532066.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2041909 2042121 . - . ID=gene-CCO47_RS09880;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=protein_coding;locus_tag=CCO47_RS09880;old_locus_tag=CCO47_09880 NZ_CP075113.1 Protein Homology CDS 2041909 2042121 . - 0 ID=cds-WP_001537306.1;Parent=gene-CCO47_RS09880;Dbxref=GenBank:WP_001537306.1;Name=WP_001537306.1;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460213.1;locus_tag=CCO47_RS09880;product=cold shock-like protein CspF;protein_id=WP_001537306.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2042253 2042516 . - . ID=gene-CCO47_RS09885;Name=pagD;gbkey=Gene;gene=pagD;gene_biotype=protein_coding;locus_tag=CCO47_RS09885;old_locus_tag=CCO47_09885 NZ_CP075113.1 Protein Homology CDS 2042253 2042516 . - 0 ID=cds-WP_001535993.1;Parent=gene-CCO47_RS09885;Dbxref=GenBank:WP_001535993.1;Name=WP_001535993.1;gbkey=CDS;gene=pagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460214.1;locus_tag=CCO47_RS09885;product=virulence protein PagD;protein_id=WP_001535993.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2043328 2043885 . + . ID=gene-CCO47_RS09890;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=CCO47_RS09890;old_locus_tag=CCO47_09890 NZ_CP075113.1 Protein Homology CDS 2043328 2043885 . + 0 ID=cds-WP_000789466.1;Parent=gene-CCO47_RS09890;Dbxref=GenBank:WP_000789466.1;Name=WP_000789466.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460215.1;locus_tag=CCO47_RS09890;product=virulence membrane protein PagC;protein_id=WP_000789466.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2044276 2044352 . + . ID=gene-CCO47_RS09895;Name=CCO47_RS09895;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS09895;old_locus_tag=CCO47_09895 NZ_CP075113.1 tRNAscan-SE tRNA 2044276 2044352 . + . ID=rna-CCO47_RS09895;Parent=gene-CCO47_RS09895;anticodon=(pos:2044310..2044312);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS09895;product=tRNA-Arg NZ_CP075113.1 tRNAscan-SE exon 2044276 2044352 . + . ID=exon-CCO47_RS09895-1;Parent=rna-CCO47_RS09895;anticodon=(pos:2044310..2044312);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS09895;product=tRNA-Arg NZ_CP075113.1 RefSeq gene 2045107 2045451 . - . ID=gene-CCO47_RS09900;Name=CCO47_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09900;old_locus_tag=CCO47_09900 NZ_CP075113.1 Protein Homology CDS 2045107 2045451 . - 0 ID=cds-WP_000977725.1;Parent=gene-CCO47_RS09900;Dbxref=GenBank:WP_000977725.1;Name=WP_000977725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=CCO47_RS09900;product=c-type lysozyme inhibitor;protein_id=WP_000977725.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2046154 2046426 . + . ID=gene-CCO47_RS09905;Name=CCO47_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09905;old_locus_tag=CCO47_09905 NZ_CP075113.1 Protein Homology CDS 2046154 2046426 . + 0 ID=cds-WP_000927827.1;Parent=gene-CCO47_RS09905;Dbxref=GenBank:WP_000927827.1;Name=WP_000927827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=CCO47_RS09905;product=hypothetical protein;protein_id=WP_000927827.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2046579 2047046 . + . ID=gene-CCO47_RS09910;Name=CCO47_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09910;old_locus_tag=CCO47_09910 NZ_CP075113.1 Protein Homology CDS 2046579 2047046 . + 0 ID=cds-WP_001218120.1;Parent=gene-CCO47_RS09910;Dbxref=GenBank:WP_001218120.1;Name=WP_001218120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460218.1;locus_tag=CCO47_RS09910;product=Hsp20 family protein;protein_id=WP_001218120.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2047385 2048429 . + . ID=gene-CCO47_RS09915;Name=CCO47_RS09915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS09915;old_locus_tag=CCO47_09915;pseudo=true NZ_CP075113.1 Protein Homology CDS 2047385 2048429 . + 0 ID=cds-CCO47_RS09915;Parent=gene-CCO47_RS09915;Note=frameshifted;Ontology_term=GO:0005975,GO:0004308,GO:0016997;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA,alpha-sialidase activity|0016997||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460219.1;locus_tag=CCO47_RS09915;product=sialidase family protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2048512 2049042 . - . ID=gene-CCO47_RS09920;Name=CCO47_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09920;old_locus_tag=CCO47_09920 NZ_CP075113.1 Protein Homology CDS 2048512 2049042 . - 0 ID=cds-WP_000929980.1;Parent=gene-CCO47_RS09920;Dbxref=GenBank:WP_000929980.1;Name=WP_000929980.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460220.1;locus_tag=CCO47_RS09920;product=cytochrome b;protein_id=WP_000929980.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2049191 2049505 . - . ID=gene-CCO47_RS09925;Name=CCO47_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09925;old_locus_tag=CCO47_09925 NZ_CP075113.1 Protein Homology CDS 2049191 2049505 . - 0 ID=cds-WP_000182479.1;Parent=gene-CCO47_RS09925;Dbxref=GenBank:WP_000182479.1;Name=WP_000182479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460221.1;locus_tag=CCO47_RS09925;product=TRL-like family protein;protein_id=WP_000182479.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2050187 2051821 . + . ID=gene-CCO47_RS09930;Name=CCO47_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09930;old_locus_tag=CCO47_09930 NZ_CP075113.1 Protein Homology CDS 2050187 2051821 . + 0 ID=cds-WP_000946094.1;Parent=gene-CCO47_RS09930;Dbxref=GenBank:WP_000946094.1;Name=WP_000946094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460222.1;locus_tag=CCO47_RS09930;product=ABC transporter substrate-binding protein;protein_id=WP_000946094.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2051821 2052795 . + . ID=gene-CCO47_RS09935;Name=CCO47_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09935;old_locus_tag=CCO47_09935 NZ_CP075113.1 Protein Homology CDS 2051821 2052795 . + 0 ID=cds-WP_001520270.1;Parent=gene-CCO47_RS09935;Dbxref=GenBank:WP_001520270.1;Name=WP_001520270.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=CCO47_RS09935;product=ABC transporter permease;protein_id=WP_001520270.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2052785 2053597 . + . ID=gene-CCO47_RS09940;Name=CCO47_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09940;old_locus_tag=CCO47_09940 NZ_CP075113.1 Protein Homology CDS 2052785 2053597 . + 0 ID=cds-WP_000966641.1;Parent=gene-CCO47_RS09940;Dbxref=GenBank:WP_000966641.1;Name=WP_000966641.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460224.1;locus_tag=CCO47_RS09940;product=ABC transporter permease;protein_id=WP_000966641.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2053591 2054388 . + . ID=gene-CCO47_RS09945;Name=CCO47_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09945;old_locus_tag=CCO47_09945 NZ_CP075113.1 Protein Homology CDS 2053591 2054388 . + 0 ID=cds-WP_000950212.1;Parent=gene-CCO47_RS09945;Dbxref=GenBank:WP_000950212.1;Name=WP_000950212.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460225.1;locus_tag=CCO47_RS09945;product=ATP-binding cassette domain-containing protein;protein_id=WP_000950212.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2054382 2054972 . + . ID=gene-CCO47_RS09950;Name=CCO47_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09950;old_locus_tag=CCO47_09950 NZ_CP075113.1 Protein Homology CDS 2054382 2054972 . + 0 ID=cds-WP_000947460.1;Parent=gene-CCO47_RS09950;Dbxref=GenBank:WP_000947460.1;Name=WP_000947460.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460226.1;locus_tag=CCO47_RS09950;product=ATP-binding cassette domain-containing protein;protein_id=WP_000947460.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2055054 2056187 . - . ID=gene-CCO47_RS09955;Name=CCO47_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09955;old_locus_tag=CCO47_09955 NZ_CP075113.1 Protein Homology CDS 2055054 2056187 . - 0 ID=cds-WP_000456072.1;Parent=gene-CCO47_RS09955;Dbxref=GenBank:WP_000456072.1;Name=WP_000456072.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460227.1;locus_tag=CCO47_RS09955;product=mechanosensitive ion channel family protein;protein_id=WP_000456072.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2056381 2056707 . + . ID=gene-CCO47_RS09960;Name=CCO47_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09960;old_locus_tag=CCO47_09960 NZ_CP075113.1 Protein Homology CDS 2056381 2056707 . + 0 ID=cds-WP_001183699.1;Parent=gene-CCO47_RS09960;Dbxref=GenBank:WP_001183699.1;Name=WP_001183699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460228.1;locus_tag=CCO47_RS09960;product=four-helix bundle copper-binding protein;protein_id=WP_001183699.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2056716 2056792 . + . ID=gene-CCO47_RS09965;Name=CCO47_RS09965;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS09965;old_locus_tag=CCO47_09965 NZ_CP075113.1 tRNAscan-SE tRNA 2056716 2056792 . + . ID=rna-CCO47_RS09965;Parent=gene-CCO47_RS09965;anticodon=(pos:2056750..2056752);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS09965;product=tRNA-Arg NZ_CP075113.1 tRNAscan-SE exon 2056716 2056792 . + . ID=exon-CCO47_RS09965-1;Parent=rna-CCO47_RS09965;anticodon=(pos:2056750..2056752);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS09965;product=tRNA-Arg NZ_CP075113.1 RefSeq gene 2056904 2057551 . + . ID=gene-CCO47_RS09970;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=CCO47_RS09970;old_locus_tag=CCO47_09970 NZ_CP075113.1 Protein Homology CDS 2056904 2057551 . + 0 ID=cds-WP_001574476.1;Parent=gene-CCO47_RS09970;Dbxref=GenBank:WP_001574476.1;Name=WP_001574476.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460229.3;locus_tag=CCO47_RS09970;product=metal-binding protein ZinT;protein_id=WP_001574476.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2057660 2058448 . + . ID=gene-CCO47_RS09975;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=CCO47_RS09975;old_locus_tag=CCO47_09975 NZ_CP075113.1 Protein Homology CDS 2057660 2058448 . + 0 ID=cds-WP_000175795.1;Parent=gene-CCO47_RS09975;Dbxref=GenBank:WP_000175795.1;Name=WP_000175795.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=CCO47_RS09975;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=WP_000175795.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2058593 2059186 . + . ID=gene-CCO47_RS09980;Name=CCO47_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09980;old_locus_tag=CCO47_09980 NZ_CP075113.1 Protein Homology CDS 2058593 2059186 . + 0 ID=cds-WP_001675568.1;Parent=gene-CCO47_RS09980;Dbxref=GenBank:WP_001675568.1;Name=WP_001675568.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=CCO47_RS09980;product=helix-turn-helix domain-containing protein;protein_id=WP_001675568.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2059255 2060103 . + . ID=gene-CCO47_RS09985;Name=CCO47_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09985;old_locus_tag=CCO47_09985 NZ_CP075113.1 Protein Homology CDS 2059255 2060103 . + 0 ID=cds-WP_000190259.1;Parent=gene-CCO47_RS09985;Dbxref=GenBank:WP_000190259.1;Name=WP_000190259.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=CCO47_RS09985;product=MerR family transcriptional regulator;protein_id=WP_000190259.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2060357 2060605 . - . ID=gene-CCO47_RS09990;Name=CCO47_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09990;old_locus_tag=CCO47_09990 NZ_CP075113.1 Protein Homology CDS 2060357 2060605 . - 0 ID=cds-WP_000208086.1;Parent=gene-CCO47_RS09990;Dbxref=GenBank:WP_000208086.1;Name=WP_000208086.1;Ontology_term=GO:0071468,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460233.1;locus_tag=CCO47_RS09990;product=biofilm/acid-resistance regulator YmgB/AriR;protein_id=WP_000208086.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2060684 2060838 . - . ID=gene-CCO47_RS24150;Name=CCO47_RS24150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24150;pseudo=true NZ_CP075113.1 Protein Homology CDS 2060684 2060838 . - 0 ID=cds-CCO47_RS24150;Parent=gene-CCO47_RS24150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460234.1;locus_tag=CCO47_RS24150;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2060921 2061466 . + . ID=gene-CCO47_RS09995;Name=CCO47_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS09995;old_locus_tag=CCO47_09995 NZ_CP075113.1 Protein Homology CDS 2060921 2061466 . + 0 ID=cds-WP_000617985.1;Parent=gene-CCO47_RS09995;Dbxref=GenBank:WP_000617985.1;Name=WP_000617985.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460235.1;locus_tag=CCO47_RS09995;product=chorismate mutase;protein_id=WP_000617985.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2061663 2062301 . + . ID=gene-CCO47_RS10000;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=CCO47_RS10000;old_locus_tag=CCO47_10000 NZ_CP075113.1 Protein Homology CDS 2061663 2062301 . + 0 ID=cds-WP_000457190.1;Parent=gene-CCO47_RS10000;Dbxref=GenBank:WP_000457190.1;Name=WP_000457190.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460236.1;locus_tag=CCO47_RS10000;product=leucine efflux protein LeuE;protein_id=WP_000457190.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2062475 2062837 . + . ID=gene-CCO47_RS10005;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=CCO47_RS10005;old_locus_tag=CCO47_10005 NZ_CP075113.1 Protein Homology CDS 2062475 2062837 . + 0 ID=cds-WP_001248993.1;Parent=gene-CCO47_RS10005;Dbxref=GenBank:WP_001248993.1;Name=WP_001248993.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460237.1;locus_tag=CCO47_RS10005;product=DUF1971 domain-containing protein YeaR;protein_id=WP_001248993.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2062840 2063022 . + . ID=gene-CCO47_RS10010;Name=CCO47_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10010;old_locus_tag=CCO47_10010 NZ_CP075113.1 Protein Homology CDS 2062840 2063022 . + 0 ID=cds-WP_000513733.1;Parent=gene-CCO47_RS10010;Dbxref=GenBank:WP_000513733.1;Name=WP_000513733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=CCO47_RS10010;product=DUF1869 domain-containing protein;protein_id=WP_000513733.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2063252 2063893 . + . ID=gene-CCO47_RS10015;Name=CCO47_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10015;old_locus_tag=CCO47_10015 NZ_CP075113.1 Protein Homology CDS 2063252 2063893 . + 0 ID=cds-WP_094912304.1;Parent=gene-CCO47_RS10015;Dbxref=GenBank:WP_094912304.1;Name=WP_094912304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460239.1;locus_tag=CCO47_RS10015;product=hypothetical protein;protein_id=WP_094912304.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2064207 2064455 . + . ID=gene-CCO47_RS10020;Name=CCO47_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10020;old_locus_tag=CCO47_10020 NZ_CP075113.1 Protein Homology CDS 2064207 2064455 . + 0 ID=cds-WP_000512149.1;Parent=gene-CCO47_RS10020;Dbxref=GenBank:WP_000512149.1;Name=WP_000512149.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460240.1;locus_tag=CCO47_RS10020;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512149.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2064594 2064692 . - . ID=gene-CCO47_RS10025;Name=CCO47_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10025;old_locus_tag=CCO47_10025 NZ_CP075113.1 Protein Homology CDS 2064594 2064692 . - 0 ID=cds-WP_001589065.1;Parent=gene-CCO47_RS10025;Dbxref=GenBank:WP_001589065.1;Name=WP_001589065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=CCO47_RS10025;product=YoaK family small membrane protein;protein_id=WP_001589065.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2064888 2065139 . + . ID=gene-CCO47_RS10030;Name=CCO47_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10030;old_locus_tag=CCO47_10030 NZ_CP075113.1 Protein Homology CDS 2064888 2065139 . + 0 ID=cds-WP_000673491.1;Parent=gene-CCO47_RS10030;Dbxref=GenBank:WP_000673491.1;Name=WP_000673491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460241.1;locus_tag=CCO47_RS10030;product=putative hemolysin;protein_id=WP_000673491.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2065208 2065519 . + . ID=gene-CCO47_RS10035;Name=CCO47_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10035;old_locus_tag=CCO47_10035 NZ_CP075113.1 Protein Homology CDS 2065208 2065519 . + 0 ID=cds-WP_000487129.1;Parent=gene-CCO47_RS10035;Dbxref=GenBank:WP_000487129.1;Name=WP_000487129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460242.1;locus_tag=CCO47_RS10035;product=hypothetical protein;protein_id=WP_000487129.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2065505 2065852 . - . ID=gene-CCO47_RS10040;Name=CCO47_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10040;old_locus_tag=CCO47_10040 NZ_CP075113.1 Protein Homology CDS 2065505 2065852 . - 0 ID=cds-WP_001222530.1;Parent=gene-CCO47_RS10040;Dbxref=GenBank:WP_001222530.1;Name=WP_001222530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=CCO47_RS10040;product=DUF488 domain-containing protein;protein_id=WP_001222530.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2065971 2067155 . - . ID=gene-CCO47_RS10045;Name=CCO47_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10045;old_locus_tag=CCO47_10045 NZ_CP075113.1 Protein Homology CDS 2065971 2067155 . - 0 ID=cds-WP_000205346.1;Parent=gene-CCO47_RS10045;Dbxref=GenBank:WP_000205346.1;Name=WP_000205346.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460244.1;locus_tag=CCO47_RS10045;product=CynX/NimT family MFS transporter;protein_id=WP_000205346.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2067256 2068050 . + . ID=gene-CCO47_RS10050;Name=CCO47_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10050;old_locus_tag=CCO47_10050 NZ_CP075113.1 Protein Homology CDS 2067256 2068050 . + 0 ID=cds-WP_000579790.1;Parent=gene-CCO47_RS10050;Dbxref=GenBank:WP_000579790.1;Name=WP_000579790.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460245.1;locus_tag=CCO47_RS10050;product=AraC family transcriptional regulator;protein_id=WP_000579790.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2068030 2068476 . - . ID=gene-CCO47_RS10055;Name=CCO47_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10055;old_locus_tag=CCO47_10055 NZ_CP075113.1 Protein Homology CDS 2068030 2068476 . - 0 ID=cds-WP_000460698.1;Parent=gene-CCO47_RS10055;Dbxref=GenBank:WP_000460698.1;Name=WP_000460698.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460246.2;locus_tag=CCO47_RS10055;product=DUF441 domain-containing protein;protein_id=WP_000460698.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2068682 2068789 . + . ID=gene-CCO47_RS10060;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=CCO47_RS10060;old_locus_tag=CCO47_10060 NZ_CP075113.1 Protein Homology CDS 2068682 2068789 . + 0 ID=cds-WP_000272244.1;Parent=gene-CCO47_RS10060;Dbxref=GenBank:WP_000272244.1;Name=WP_000272244.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460247.1;locus_tag=CCO47_RS10060;product=small membrane protein YoaI;protein_id=WP_000272244.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2068786 2069304 . - . ID=gene-CCO47_RS10065;Name=CCO47_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10065;old_locus_tag=CCO47_10065 NZ_CP075113.1 Protein Homology CDS 2068786 2069304 . - 0 ID=cds-WP_162138165.1;Parent=gene-CCO47_RS10065;Dbxref=GenBank:WP_162138165.1;Name=WP_162138165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460248.1;locus_tag=CCO47_RS10065;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_162138165.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2069354 2070847 . - . ID=gene-CCO47_RS10070;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=CCO47_RS10070;old_locus_tag=CCO47_10070 NZ_CP075113.1 Protein Homology CDS 2069354 2070847 . - 0 ID=cds-WP_001048663.1;Parent=gene-CCO47_RS10070;Dbxref=GenBank:WP_001048663.1;Name=WP_001048663.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460249.1;locus_tag=CCO47_RS10070;product=diguanylate cyclase DgcJ;protein_id=WP_001048663.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2071142 2071342 . + . ID=gene-CCO47_RS10075;Name=CCO47_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10075;old_locus_tag=CCO47_10075 NZ_CP075113.1 GeneMarkS-2+ CDS 2071142 2071342 . + 0 ID=cds-WP_016705258.1;Parent=gene-CCO47_RS10075;Dbxref=GenBank:WP_016705258.1;Name=WP_016705258.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO47_RS10075;product=hypothetical protein;protein_id=WP_016705258.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2071487 2072773 . - . ID=gene-CCO47_RS10080;Name=CCO47_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10080;old_locus_tag=CCO47_10080 NZ_CP075113.1 Protein Homology CDS 2071487 2072773 . - 0 ID=cds-WP_000219715.1;Parent=gene-CCO47_RS10080;Dbxref=GenBank:WP_000219715.1;Name=WP_000219715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746804.1;locus_tag=CCO47_RS10080;product=YeaH/YhbH family protein;protein_id=WP_000219715.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2072896 2074830 . - . ID=gene-CCO47_RS10085;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=CCO47_RS10085;old_locus_tag=CCO47_10085 NZ_CP075113.1 Protein Homology CDS 2072896 2074830 . - 0 ID=cds-WP_001518010.1;Parent=gene-CCO47_RS10085;Dbxref=GenBank:WP_001518010.1;Name=WP_001518010.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=CCO47_RS10085;product=protein kinase YeaG;protein_id=WP_001518010.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2075257 2076003 . + . ID=gene-CCO47_RS10090;Name=CCO47_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10090;old_locus_tag=CCO47_10090 NZ_CP075113.1 Protein Homology CDS 2075257 2076003 . + 0 ID=cds-WP_000163762.1;Parent=gene-CCO47_RS10090;Dbxref=GenBank:WP_000163762.1;Name=WP_000163762.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460252.1;locus_tag=CCO47_RS10090;product=MipA/OmpV family protein;protein_id=WP_000163762.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2076293 2077489 . + . ID=gene-CCO47_RS10095;Name=CCO47_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10095;old_locus_tag=CCO47_10095 NZ_CP075113.1 Protein Homology CDS 2076293 2077489 . + 0 ID=cds-WP_000029247.1;Parent=gene-CCO47_RS10095;Dbxref=GenBank:WP_000029247.1;Name=WP_000029247.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460253.1;locus_tag=CCO47_RS10095;product=anaerobic sulfatase maturase;protein_id=WP_000029247.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2077586 2078443 . + . ID=gene-CCO47_RS10100;Name=CCO47_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10100;old_locus_tag=CCO47_10100 NZ_CP075113.1 Protein Homology CDS 2077586 2078443 . + 0 ID=cds-WP_000843751.1;Parent=gene-CCO47_RS10100;Dbxref=GenBank:WP_000843751.1;Name=WP_000843751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460254.1;locus_tag=CCO47_RS10100;product=aldo/keto reductase;protein_id=WP_000843751.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2078542 2079426 . - . ID=gene-CCO47_RS10105;Name=CCO47_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10105;old_locus_tag=CCO47_10105 NZ_CP075113.1 Protein Homology CDS 2078542 2079426 . - 0 ID=cds-WP_000608660.1;Parent=gene-CCO47_RS10105;Dbxref=GenBank:WP_000608660.1;Name=WP_000608660.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=CCO47_RS10105;product=D-hexose-6-phosphate mutarotase;protein_id=WP_000608660.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2079755 2080750 . - . ID=gene-CCO47_RS10110;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=CCO47_RS10110;old_locus_tag=CCO47_10110 NZ_CP075113.1 Protein Homology CDS 2079755 2080750 . - 0 ID=cds-WP_000153505.1;Parent=gene-CCO47_RS10110;Dbxref=GenBank:WP_000153505.1;Name=WP_000153505.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=CCO47_RS10110;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153505.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2081092 2081505 . + . ID=gene-CCO47_RS10115;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=CCO47_RS10115;old_locus_tag=CCO47_10115 NZ_CP075113.1 Protein Homology CDS 2081092 2081505 . + 0 ID=cds-WP_001519539.1;Parent=gene-CCO47_RS10115;Dbxref=GenBank:WP_001519539.1;Name=WP_001519539.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=CCO47_RS10115;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_001519539.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2081547 2081825 . + . ID=gene-CCO47_RS10120;Name=CCO47_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10120;old_locus_tag=CCO47_10120 NZ_CP075113.1 Protein Homology CDS 2081547 2081825 . + 0 ID=cds-WP_001046864.1;Parent=gene-CCO47_RS10120;Dbxref=GenBank:WP_001046864.1;Name=WP_001046864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460258.1;locus_tag=CCO47_RS10120;product=YeaC family protein;protein_id=WP_001046864.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2082001 2082423 . - . ID=gene-CCO47_RS24155;Name=CCO47_RS24155;end_range=2082423,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24155;partial=true;pseudo=true;start_range=.,2082001 NZ_CP075113.1 Protein Homology CDS 2082001 2082423 . - 0 ID=cds-CCO47_RS24155;Parent=gene-CCO47_RS24155;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0005975;end_range=2082423,.;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004892855.1;locus_tag=CCO47_RS24155;partial=true;product=glycosyl hydrolase family 18 protein;pseudo=true;start_range=.,2082001;transl_table=11 NZ_CP075113.1 RefSeq gene 2082719 2083795 . + . ID=gene-CCO47_RS10125;Name=CCO47_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10125;old_locus_tag=CCO47_10125 NZ_CP075113.1 Protein Homology CDS 2082719 2083795 . + 0 ID=cds-WP_000645184.1;Parent=gene-CCO47_RS10125;Dbxref=GenBank:WP_000645184.1;Name=WP_000645184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310512.1;locus_tag=CCO47_RS10125;product=zinc-binding dehydrogenase;protein_id=WP_000645184.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2083822 2085201 . + . ID=gene-CCO47_RS10130;Name=CCO47_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10130;old_locus_tag=CCO47_10130 NZ_CP075113.1 Protein Homology CDS 2083822 2085201 . + 0 ID=cds-WP_000435324.1;Parent=gene-CCO47_RS10130;Dbxref=GenBank:WP_000435324.1;Name=WP_000435324.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=CCO47_RS10130;product=MFS transporter;protein_id=WP_000435324.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2085212 2086255 . + . ID=gene-CCO47_RS10135;Name=CCO47_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10135;old_locus_tag=CCO47_10135 NZ_CP075113.1 Protein Homology CDS 2085212 2086255 . + 0 ID=cds-WP_000798080.1;Parent=gene-CCO47_RS10135;Dbxref=GenBank:WP_000798080.1;Name=WP_000798080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416288.1;locus_tag=CCO47_RS10135;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_000798080.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2086277 2087113 . + . ID=gene-CCO47_RS10140;Name=CCO47_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10140;old_locus_tag=CCO47_10140 NZ_CP075113.1 Protein Homology CDS 2086277 2087113 . + 0 ID=cds-WP_000878874.1;Parent=gene-CCO47_RS10140;Dbxref=GenBank:WP_000878874.1;Name=WP_000878874.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416287.1;locus_tag=CCO47_RS10140;product=ketose-bisphosphate aldolase;protein_id=WP_000878874.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2087118 2088065 . + . ID=gene-CCO47_RS10145;Name=CCO47_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10145;old_locus_tag=CCO47_10145 NZ_CP075113.1 Protein Homology CDS 2087118 2088065 . + 0 ID=cds-WP_000343334.1;Parent=gene-CCO47_RS10145;Dbxref=GenBank:WP_000343334.1;Name=WP_000343334.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416286.4;locus_tag=CCO47_RS10145;product=sugar kinase;protein_id=WP_000343334.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2088075 2089058 . + . ID=gene-CCO47_RS10150;Name=ydjG;gbkey=Gene;gene=ydjG;gene_biotype=protein_coding;locus_tag=CCO47_RS10150;old_locus_tag=CCO47_10150 NZ_CP075113.1 Protein Homology CDS 2088075 2089058 . + 0 ID=cds-WP_000782139.1;Parent=gene-CCO47_RS10150;Dbxref=GenBank:WP_000782139.1;Name=WP_000782139.1;Ontology_term=GO:0019170;gbkey=CDS;gene=ydjG;go_function=methylglyoxal reductase (NADH) activity|0019170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782140.1;locus_tag=CCO47_RS10150;product=NADH-dependent methylglyoxal reductase;protein_id=WP_000782139.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2089188 2089946 . + . ID=gene-CCO47_RS10155;Name=CCO47_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10155;old_locus_tag=CCO47_10155 NZ_CP075113.1 Protein Homology CDS 2089188 2089946 . + 0 ID=cds-WP_000719104.1;Parent=gene-CCO47_RS10155;Dbxref=GenBank:WP_000719104.1;Name=WP_000719104.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226392.1;locus_tag=CCO47_RS10155;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000719104.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2090082 2091440 . + . ID=gene-CCO47_RS10160;Name=CCO47_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10160;old_locus_tag=CCO47_10160 NZ_CP075113.1 Protein Homology CDS 2090082 2091440 . + 0 ID=cds-WP_000389924.1;Parent=gene-CCO47_RS10160;Dbxref=GenBank:WP_000389924.1;Name=WP_000389924.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389924.1;locus_tag=CCO47_RS10160;product=MFS transporter;protein_id=WP_000389924.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2091543 2092199 . - . ID=gene-CCO47_RS10165;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=CCO47_RS10165;old_locus_tag=CCO47_10165 NZ_CP075113.1 Protein Homology CDS 2091543 2092199 . - 0 ID=cds-WP_000184708.1;Parent=gene-CCO47_RS10165;Dbxref=GenBank:WP_000184708.1;Name=WP_000184708.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460259.1;locus_tag=CCO47_RS10165;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_000184708.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2092226 2093242 . - . ID=gene-CCO47_RS10170;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=CCO47_RS10170;old_locus_tag=CCO47_10170 NZ_CP075113.1 Protein Homology CDS 2092226 2093242 . - 0 ID=cds-WP_001170141.1;Parent=gene-CCO47_RS10170;Dbxref=GenBank:WP_001170141.1;Name=WP_001170141.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=CCO47_RS10170;product=asparaginase;protein_id=WP_001170141.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2093338 2095194 . - . ID=gene-CCO47_RS10175;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=CCO47_RS10175;old_locus_tag=CCO47_10175 NZ_CP075113.1 Protein Homology CDS 2093338 2095194 . - 0 ID=cds-WP_001259860.1;Parent=gene-CCO47_RS10175;Dbxref=GenBank:WP_001259860.1;Name=WP_001259860.1;Ontology_term=GO:0051604,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460261.1;locus_tag=CCO47_RS10175;product=signal peptide peptidase SppA;protein_id=WP_001259860.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2095368 2095919 . + . ID=gene-CCO47_RS10180;Name=CCO47_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10180;old_locus_tag=CCO47_10180 NZ_CP075113.1 Protein Homology CDS 2095368 2095919 . + 0 ID=cds-WP_000339313.1;Parent=gene-CCO47_RS10180;Dbxref=GenBank:WP_000339313.1;Name=WP_000339313.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460262.1;locus_tag=CCO47_RS10180;product=NAD(P)H nitroreductase;protein_id=WP_000339313.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2096037 2097080 . + . ID=gene-CCO47_RS10185;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=CCO47_RS10185;old_locus_tag=CCO47_10185 NZ_CP075113.1 Protein Homology CDS 2096037 2097080 . + 0 ID=cds-WP_001294900.1;Parent=gene-CCO47_RS10185;Dbxref=GenBank:WP_001294900.1;Name=WP_001294900.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=L-selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=CCO47_RS10185;product=selenide%2C water dikinase SelD;protein_id=WP_001294900.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2097085 2099034 . + . ID=gene-CCO47_RS10190;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=CCO47_RS10190;old_locus_tag=CCO47_10190 NZ_CP075113.1 Protein Homology CDS 2097085 2099034 . + 0 ID=cds-WP_001235866.1;Parent=gene-CCO47_RS10190;Dbxref=GenBank:WP_001235866.1;Name=WP_001235866.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460264.1;locus_tag=CCO47_RS10190;product=DNA topoisomerase III;protein_id=WP_001235866.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2099064 2100407 . - . ID=gene-CCO47_RS10195;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=CCO47_RS10195;old_locus_tag=CCO47_10195 NZ_CP075113.1 Protein Homology CDS 2099064 2100407 . - 0 ID=cds-WP_000372865.1;Parent=gene-CCO47_RS10195;Dbxref=GenBank:WP_000372865.1;Name=WP_000372865.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460265.1;locus_tag=CCO47_RS10195;product=NADP-specific glutamate dehydrogenase;protein_id=WP_000372865.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2100646 2100921 . + . ID=gene-CCO47_RS10200;Name=CCO47_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10200;old_locus_tag=CCO47_10200 NZ_CP075113.1 Protein Homology CDS 2100646 2100921 . + 0 ID=cds-WP_001254682.1;Parent=gene-CCO47_RS10200;Dbxref=GenBank:WP_001254682.1;Name=WP_001254682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465441.1;locus_tag=CCO47_RS10200;product=YnjH family protein;protein_id=WP_001254682.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2100881 2101297 . - . ID=gene-CCO47_RS10205;Name=CCO47_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10205;old_locus_tag=CCO47_10205 NZ_CP075113.1 Protein Homology CDS 2100881 2101297 . - 0 ID=cds-WP_000592133.1;Parent=gene-CCO47_RS10205;Dbxref=GenBank:WP_000592133.1;Name=WP_000592133.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460267.1;locus_tag=CCO47_RS10205;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WP_000592133.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2101370 2102176 . - . ID=gene-CCO47_RS10210;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=CCO47_RS10210;old_locus_tag=CCO47_10210 NZ_CP075113.1 Protein Homology CDS 2101370 2102176 . - 0 ID=cds-WP_000673954.1;Parent=gene-CCO47_RS10210;Dbxref=GenBank:WP_000673954.1;Name=WP_000673954.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460268.1;locus_tag=CCO47_RS10210;product=exodeoxyribonuclease III;protein_id=WP_000673954.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2102622 2103848 . + . ID=gene-CCO47_RS10215;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=CCO47_RS10215;old_locus_tag=CCO47_10215 NZ_CP075113.1 Protein Homology CDS 2102622 2103848 . + 0 ID=cds-WP_000059504.1;Parent=gene-CCO47_RS10215;Dbxref=GenBank:WP_000059504.1;Name=WP_000059504.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460269.1;locus_tag=CCO47_RS10215;product=succinylornithine/acetylornithine transaminase;protein_id=WP_000059504.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2103839 2104873 . + . ID=gene-CCO47_RS10220;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=CCO47_RS10220;old_locus_tag=CCO47_10220 NZ_CP075113.1 Protein Homology CDS 2103839 2104873 . + 0 ID=cds-WP_001263889.1;Parent=gene-CCO47_RS10220;Dbxref=GenBank:WP_001263889.1;Name=WP_001263889.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=CCO47_RS10220;product=arginine N-succinyltransferase;protein_id=WP_001263889.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2104870 2106348 . + . ID=gene-CCO47_RS10225;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=CCO47_RS10225;old_locus_tag=CCO47_10225 NZ_CP075113.1 Protein Homology CDS 2104870 2106348 . + 0 ID=cds-WP_000177259.1;Parent=gene-CCO47_RS10225;Dbxref=GenBank:WP_000177259.1;Name=WP_000177259.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=CCO47_RS10225;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_000177259.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2106345 2107688 . + . ID=gene-CCO47_RS10230;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=CCO47_RS10230;old_locus_tag=CCO47_10230 NZ_CP075113.1 Protein Homology CDS 2106345 2107688 . + 0 ID=cds-WP_000123932.1;Parent=gene-CCO47_RS10230;Dbxref=GenBank:WP_000123932.1;Name=WP_000123932.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460272.1;locus_tag=CCO47_RS10230;product=N-succinylarginine dihydrolase;protein_id=WP_000123932.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2107681 2108649 . + . ID=gene-CCO47_RS10235;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=CCO47_RS10235;old_locus_tag=CCO47_10235 NZ_CP075113.1 Protein Homology CDS 2107681 2108649 . + 0 ID=cds-WP_000368464.1;Parent=gene-CCO47_RS10235;Dbxref=GenBank:WP_000368464.1;Name=WP_000368464.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460273.1;locus_tag=CCO47_RS10235;product=succinylglutamate desuccinylase;protein_id=WP_000368464.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2108985 2109470 . + . ID=gene-CCO47_RS10240;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=CCO47_RS10240;old_locus_tag=CCO47_10240 NZ_CP075113.1 Protein Homology CDS 2108985 2109470 . + 0 ID=cds-WP_001229001.1;Parent=gene-CCO47_RS10240;Dbxref=GenBank:WP_001229001.1;Name=WP_001229001.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460274.1;locus_tag=CCO47_RS10240;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_001229001.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2109545 2110426 . - . ID=gene-CCO47_RS10245;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=CCO47_RS10245;old_locus_tag=CCO47_10245 NZ_CP075113.1 Protein Homology CDS 2109545 2110426 . - 0 ID=cds-WP_001675566.1;Parent=gene-CCO47_RS10245;Dbxref=GenBank:WP_001675566.1;Name=WP_001675566.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233065.1;locus_tag=CCO47_RS10245;product=excinuclease Cho;protein_id=WP_001675566.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2110547 2111374 . - . ID=gene-CCO47_RS10250;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=CCO47_RS10250;old_locus_tag=CCO47_10250 NZ_CP075113.1 Protein Homology CDS 2110547 2111374 . - 0 ID=cds-WP_000174980.1;Parent=gene-CCO47_RS10250;Dbxref=GenBank:WP_000174980.1;Name=WP_000174980.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=CCO47_RS10250;product=NAD(+) synthase;protein_id=WP_000174980.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2111593 2111934 . + . ID=gene-CCO47_RS10255;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=CCO47_RS10255;old_locus_tag=CCO47_10255 NZ_CP075113.1 Protein Homology CDS 2111593 2111934 . + 0 ID=cds-WP_001039301.1;Parent=gene-CCO47_RS10255;Dbxref=GenBank:WP_001039301.1;Name=WP_001039301.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460277.1;locus_tag=CCO47_RS10255;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001039301.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2112235 2112555 . + . ID=gene-CCO47_RS10260;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=CCO47_RS10260;old_locus_tag=CCO47_10260 NZ_CP075113.1 Protein Homology CDS 2112235 2112555 . + 0 ID=cds-WP_000412161.1;Parent=gene-CCO47_RS10260;Dbxref=GenBank:WP_000412161.1;Name=WP_000412161.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460278.1;locus_tag=CCO47_RS10260;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412161.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2112638 2113996 . + . ID=gene-CCO47_RS10265;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=CCO47_RS10265;old_locus_tag=CCO47_10265 NZ_CP075113.1 Protein Homology CDS 2112638 2113996 . + 0 ID=cds-WP_000073063.1;Parent=gene-CCO47_RS10265;Dbxref=GenBank:WP_000073063.1;Name=WP_000073063.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=CCO47_RS10265;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_000073063.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2114047 2114394 . + . ID=gene-CCO47_RS10270;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=CCO47_RS10270;old_locus_tag=CCO47_10270 NZ_CP075113.1 Protein Homology CDS 2114047 2114394 . + 0 ID=cds-WP_000459883.1;Parent=gene-CCO47_RS10270;Dbxref=GenBank:WP_000459883.1;Name=WP_000459883.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460280.1;locus_tag=CCO47_RS10270;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_000459883.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2114405 2115247 . + . ID=gene-CCO47_RS10275;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=CCO47_RS10275;old_locus_tag=CCO47_10275 NZ_CP075113.1 Protein Homology CDS 2114405 2115247 . + 0 ID=cds-WP_000983393.1;Parent=gene-CCO47_RS10275;Dbxref=GenBank:WP_000983393.1;Name=WP_000983393.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460281.1;locus_tag=CCO47_RS10275;product=transcriptional regulator ChbR;protein_id=WP_000983393.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2115372 2116727 . + . ID=gene-CCO47_RS10280;Name=CCO47_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10280;old_locus_tag=CCO47_10280 NZ_CP075113.1 Protein Homology CDS 2115372 2116727 . + 0 ID=cds-WP_000078779.1;Parent=gene-CCO47_RS10280;Dbxref=GenBank:WP_000078779.1;Name=WP_000078779.1;Ontology_term=GO:0005975,GO:0008706,GO:0046872;gbkey=CDS;go_function=6-phospho-beta-glucosidase activity|0008706||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=CCO47_RS10280;product=6-phospho-beta-glucosidase;protein_id=WP_000078779.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2116740 2117498 . + . ID=gene-CCO47_RS10285;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=CCO47_RS10285;old_locus_tag=CCO47_10285 NZ_CP075113.1 Protein Homology CDS 2116740 2117498 . + 0 ID=cds-WP_000442727.1;Parent=gene-CCO47_RS10285;Dbxref=GenBank:WP_000442727.1;Name=WP_000442727.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460283.1;locus_tag=CCO47_RS10285;product=chitin disaccharide deacetylase;protein_id=WP_000442727.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2117542 2119794 . - . ID=gene-CCO47_RS10290;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=CCO47_RS10290;old_locus_tag=CCO47_10290 NZ_CP075113.1 Protein Homology CDS 2117542 2119794 . - 0 ID=cds-WP_000019098.1;Parent=gene-CCO47_RS10290;Dbxref=GenBank:WP_000019098.1;Name=WP_000019098.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=CCO47_RS10290;product=catalase HPII;protein_id=WP_000019098.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2120161 2120403 . + . ID=gene-CCO47_RS10295;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=CCO47_RS10295;old_locus_tag=CCO47_10295 NZ_CP075113.1 Protein Homology CDS 2120161 2120403 . + 0 ID=cds-WP_000977510.1;Parent=gene-CCO47_RS10295;Dbxref=GenBank:WP_000977510.1;Name=WP_000977510.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460285.1;locus_tag=CCO47_RS10295;product=cell division activator CedA;protein_id=WP_000977510.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2120505 2121896 . - . ID=gene-CCO47_RS10300;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=CCO47_RS10300;old_locus_tag=CCO47_10300 NZ_CP075113.1 Protein Homology CDS 2120505 2121896 . - 0 ID=cds-WP_001010671.1;Parent=gene-CCO47_RS10300;Dbxref=GenBank:WP_001010671.1;Name=WP_001010671.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=CCO47_RS10300;product=cystine/sulfocysteine:cation symporter;protein_id=WP_001010671.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2122033 2122632 . - . ID=gene-CCO47_RS10305;Name=CCO47_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10305;old_locus_tag=CCO47_10305 NZ_CP075113.1 Protein Homology CDS 2122033 2122632 . - 0 ID=cds-WP_000505804.1;Parent=gene-CCO47_RS10305;Dbxref=GenBank:WP_000505804.1;Name=WP_000505804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460287.3;locus_tag=CCO47_RS10305;product=metal-dependent hydrolase;protein_id=WP_000505804.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2122770 2123438 . - . ID=gene-CCO47_RS10310;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=CCO47_RS10310;old_locus_tag=CCO47_10310 NZ_CP075113.1 Protein Homology CDS 2122770 2123438 . - 0 ID=cds-WP_000106854.1;Parent=gene-CCO47_RS10310;Dbxref=GenBank:WP_000106854.1;Name=WP_000106854.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460288.1;locus_tag=CCO47_RS10310;product=hexitol phosphatase HxpB;protein_id=WP_000106854.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2123587 2124123 . + . ID=gene-CCO47_RS10315;Name=CCO47_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10315;old_locus_tag=CCO47_10315 NZ_CP075113.1 Protein Homology CDS 2123587 2124123 . + 0 ID=cds-WP_000222158.1;Parent=gene-CCO47_RS10315;Dbxref=GenBank:WP_000222158.1;Name=WP_000222158.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460289.1;locus_tag=CCO47_RS10315;product=YniB family protein;protein_id=WP_000222158.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2124166 2125026 . - . ID=gene-CCO47_RS10320;Name=CCO47_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10320;old_locus_tag=CCO47_10320 NZ_CP075113.1 Protein Homology CDS 2124166 2125026 . - 0 ID=cds-WP_000267688.1;Parent=gene-CCO47_RS10320;Dbxref=GenBank:WP_000267688.1;Name=WP_000267688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460290.1;locus_tag=CCO47_RS10320;product=fructosamine kinase family protein;protein_id=WP_000267688.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2125133 2125423 . - . ID=gene-CCO47_RS10325;Name=CCO47_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10325;old_locus_tag=CCO47_10325 NZ_CP075113.1 Protein Homology CDS 2125133 2125423 . - 0 ID=cds-WP_000146133.1;Parent=gene-CCO47_RS10325;Dbxref=GenBank:WP_000146133.1;Name=WP_000146133.1;Ontology_term=GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460291.1;locus_tag=CCO47_RS10325;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146133.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2125519 2126451 . - . ID=gene-CCO47_RS10330;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=CCO47_RS10330;old_locus_tag=CCO47_10330 NZ_CP075113.1 Protein Homology CDS 2125519 2126451 . - 0 ID=cds-WP_000251707.1;Parent=gene-CCO47_RS10330;Dbxref=GenBank:WP_000251707.1;Name=WP_000251707.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460292.1;locus_tag=CCO47_RS10330;product=6-phosphofructokinase II;protein_id=WP_000251707.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2126740 2127498 . + . ID=gene-CCO47_RS10335;Name=CCO47_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10335;old_locus_tag=CCO47_10335 NZ_CP075113.1 Protein Homology CDS 2126740 2127498 . + 0 ID=cds-WP_000770980.1;Parent=gene-CCO47_RS10335;Dbxref=GenBank:WP_000770980.1;Name=WP_000770980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460293.1;locus_tag=CCO47_RS10335;product=DUF481 domain-containing protein;protein_id=WP_000770980.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2127547 2128506 . - . ID=gene-CCO47_RS10340;Name=CCO47_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10340;old_locus_tag=CCO47_10340 NZ_CP075113.1 Protein Homology CDS 2127547 2128506 . - 0 ID=cds-WP_001046438.1;Parent=gene-CCO47_RS10340;Dbxref=GenBank:WP_001046438.1;Name=WP_001046438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460294.1;locus_tag=CCO47_RS10340;product=lipid A deacylase LpxR family protein;protein_id=WP_001046438.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2128649 2128938 . + . ID=gene-CCO47_RS10345;Name=CCO47_RS10345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS10345;old_locus_tag=CCO47_10345;pseudo=true NZ_CP075113.1 Protein Homology CDS 2128649 2128938 . + 0 ID=cds-CCO47_RS10345;Parent=gene-CCO47_RS10345;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460295.1;locus_tag=CCO47_RS10345;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2128959 2129813 . + . ID=gene-CCO47_RS10350;Name=CCO47_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10350;old_locus_tag=CCO47_10350 NZ_CP075113.1 Protein Homology CDS 2128959 2129813 . + 0 ID=cds-WP_001044085.1;Parent=gene-CCO47_RS10350;Dbxref=GenBank:WP_001044085.1;Name=WP_001044085.1;Ontology_term=GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=CCO47_RS10350;product=DNA/RNA non-specific endonuclease;protein_id=WP_001044085.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2129986 2130191 . + . ID=gene-CCO47_RS10355;Name=CCO47_RS10355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS10355;old_locus_tag=CCO47_10355;pseudo=true NZ_CP075113.1 Protein Homology CDS 2129986 2130191 . + 0 ID=cds-CCO47_RS10355;Parent=gene-CCO47_RS10355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447756.1;locus_tag=CCO47_RS10355;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2130498 2131721 . - . ID=gene-CCO47_RS10360;Name=rfc;gbkey=Gene;gene=rfc;gene_biotype=protein_coding;locus_tag=CCO47_RS10360;old_locus_tag=CCO47_10360 NZ_CP075113.1 Protein Homology CDS 2130498 2131721 . - 0 ID=cds-WP_000905565.1;Parent=gene-CCO47_RS10360;Dbxref=GenBank:WP_000905565.1;Name=WP_000905565.1;gbkey=CDS;gene=rfc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460298.1;locus_tag=CCO47_RS10360;product=O-antigen polymerase Rfc;protein_id=WP_000905565.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2132619 2134547 . + . ID=gene-CCO47_RS10365;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=CCO47_RS10365;old_locus_tag=CCO47_10365 NZ_CP075113.1 Protein Homology CDS 2132619 2134547 . + 0 ID=cds-WP_001144217.1;Parent=gene-CCO47_RS10365;Dbxref=GenBank:WP_001144217.1;Name=WP_001144217.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=CCO47_RS10365;product=threonine--tRNA ligase;protein_id=WP_001144217.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2134551 2135093 . + . ID=gene-CCO47_RS10370;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=CCO47_RS10370;old_locus_tag=CCO47_10370 NZ_CP075113.1 Protein Homology CDS 2134551 2135093 . + 0 ID=cds-WP_001574431.1;Parent=gene-CCO47_RS10370;Dbxref=GenBank:WP_001574431.1;Name=WP_001574431.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=CCO47_RS10370;product=translation initiation factor IF-3;protein_id=WP_001574431.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2135189 2135386 . + . ID=gene-CCO47_RS10375;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=CCO47_RS10375;old_locus_tag=CCO47_10375 NZ_CP075113.1 Protein Homology CDS 2135189 2135386 . + 0 ID=cds-WP_001124225.1;Parent=gene-CCO47_RS10375;Dbxref=GenBank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=CCO47_RS10375;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2135437 2135793 . + . ID=gene-CCO47_RS10380;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=CCO47_RS10380;old_locus_tag=CCO47_10380 NZ_CP075113.1 Protein Homology CDS 2135437 2135793 . + 0 ID=cds-WP_000124850.1;Parent=gene-CCO47_RS10380;Dbxref=GenBank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=CCO47_RS10380;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11 NZ_CP075113.1 cmsearch sequence_feature 2135909 2136032 . + . ID=id-NZ_CP075113.1:2135909..2136032;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_CP075113.1 RefSeq gene 2135914 2135958 . + . ID=gene-CCO47_RS10385;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=CCO47_RS10385;old_locus_tag=CCO47_10385 NZ_CP075113.1 Protein Homology CDS 2135914 2135958 . + 0 ID=cds-WP_001386830.1;Parent=gene-CCO47_RS10385;Dbxref=GenBank:WP_001386830.1;Name=WP_001386830.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=CCO47_RS10385;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2136095 2137078 . + . ID=gene-CCO47_RS10390;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=CCO47_RS10390;old_locus_tag=CCO47_10390 NZ_CP075113.1 Protein Homology CDS 2136095 2137078 . + 0 ID=cds-WP_000018570.1;Parent=gene-CCO47_RS10390;Dbxref=GenBank:WP_000018570.1;Name=WP_000018570.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=CCO47_RS10390;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000018570.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2137094 2139481 . + . ID=gene-CCO47_RS10395;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=CCO47_RS10395;old_locus_tag=CCO47_10395 NZ_CP075113.1 Protein Homology CDS 2137094 2139481 . + 0 ID=cds-WP_000672410.1;Parent=gene-CCO47_RS10395;Dbxref=GenBank:WP_000672410.1;Name=WP_000672410.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=CCO47_RS10395;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_000672410.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2139486 2139785 . + . ID=gene-CCO47_RS10400;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=CCO47_RS10400;old_locus_tag=CCO47_10400 NZ_CP075113.1 Protein Homology CDS 2139486 2139785 . + 0 ID=cds-WP_001229266.1;Parent=gene-CCO47_RS10400;Dbxref=GenBank:WP_001229266.1;Name=WP_001229266.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=CCO47_RS10400;product=integration host factor subunit alpha;protein_id=WP_001229266.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2139988 2140968 . + . ID=gene-CCO47_RS10405;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=CCO47_RS10405;old_locus_tag=CCO47_10405 NZ_CP075113.1 Protein Homology CDS 2139988 2140968 . + 0 ID=cds-WP_000954984.1;Parent=gene-CCO47_RS10405;Dbxref=GenBank:WP_000954984.1;Name=WP_000954984.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460306.1;locus_tag=CCO47_RS10405;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_000954984.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2141060 2141611 . + . ID=gene-CCO47_RS10410;Name=CCO47_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10410;old_locus_tag=CCO47_10410 NZ_CP075113.1 Protein Homology CDS 2141060 2141611 . + 0 ID=cds-WP_001181565.1;Parent=gene-CCO47_RS10410;Dbxref=GenBank:WP_001181565.1;Name=WP_001181565.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460307.1;locus_tag=CCO47_RS10410;product=glutathione peroxidase;protein_id=WP_001181565.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2141611 2142360 . + . ID=gene-CCO47_RS10415;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=CCO47_RS10415;old_locus_tag=CCO47_10415 NZ_CP075113.1 Protein Homology CDS 2141611 2142360 . + 0 ID=cds-WP_000080607.1;Parent=gene-CCO47_RS10415;Dbxref=GenBank:WP_000080607.1;Name=WP_000080607.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460308.1;locus_tag=CCO47_RS10415;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_000080607.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2142437 2142901 . + . ID=gene-CCO47_RS10420;Name=CCO47_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10420;old_locus_tag=CCO47_10420 NZ_CP075113.1 Protein Homology CDS 2142437 2142901 . + 0 ID=cds-WP_001213256.1;Parent=gene-CCO47_RS10420;Dbxref=GenBank:WP_001213256.1;Name=WP_001213256.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=CCO47_RS10420;product=C40 family peptidase;protein_id=WP_001213256.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2143215 2143928 . + . ID=gene-CCO47_RS10425;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=CCO47_RS10425;old_locus_tag=CCO47_10425 NZ_CP075113.1 Protein Homology CDS 2143215 2143928 . + 0 ID=cds-WP_000562003.1;Parent=gene-CCO47_RS10425;Dbxref=GenBank:WP_000562003.1;Name=WP_000562003.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460310.1;locus_tag=CCO47_RS10425;product=anti-FlhDC factor YdiV;protein_id=WP_000562003.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2143990 2145432 . + . ID=gene-CCO47_RS10430;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=CCO47_RS10430;old_locus_tag=CCO47_10430 NZ_CP075113.1 Protein Homology CDS 2143990 2145432 . + 0 ID=cds-WP_000175677.1;Parent=gene-CCO47_RS10430;Dbxref=GenBank:WP_000175677.1;Name=WP_000175677.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460311.1;locus_tag=CCO47_RS10430;product=protein adenylyltransferase SelO;protein_id=WP_000175677.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2145467 2145658 . - . ID=gene-CCO47_RS10435;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=CCO47_RS10435;old_locus_tag=CCO47_10435 NZ_CP075113.1 Protein Homology CDS 2145467 2145658 . - 0 ID=cds-WP_000089115.1;Parent=gene-CCO47_RS10435;Dbxref=GenBank:WP_000089115.1;Name=WP_000089115.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460312.1;locus_tag=CCO47_RS10435;product=hemin uptake protein HemP;protein_id=WP_000089115.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2145815 2146861 . - . ID=gene-CCO47_RS10440;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=CCO47_RS10440;old_locus_tag=CCO47_10440 NZ_CP075113.1 Protein Homology CDS 2145815 2146861 . - 0 ID=cds-WP_001082194.1;Parent=gene-CCO47_RS10440;Dbxref=GenBank:WP_001082194.1;Name=WP_001082194.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460313.1;locus_tag=CCO47_RS10440;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_001082194.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2147017 2147850 . - . ID=gene-CCO47_RS10445;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=CCO47_RS10445;old_locus_tag=CCO47_10445 NZ_CP075113.1 Protein Homology CDS 2147017 2147850 . - 0 ID=cds-WP_000370992.1;Parent=gene-CCO47_RS10445;Dbxref=GenBank:WP_000370992.1;Name=WP_000370992.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460314.1;locus_tag=CCO47_RS10445;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_000370992.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2148187 2150565 . + . ID=gene-CCO47_RS10450;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=CCO47_RS10450;old_locus_tag=CCO47_10450 NZ_CP075113.1 Protein Homology CDS 2148187 2150565 . + 0 ID=cds-WP_000069345.1;Parent=gene-CCO47_RS10450;Dbxref=GenBank:WP_000069345.1;Name=WP_000069345.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=CCO47_RS10450;product=phosphoenolpyruvate synthase;protein_id=WP_000069345.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2150607 2152247 . - . ID=gene-CCO47_RS10455;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=CCO47_RS10455;old_locus_tag=CCO47_10455 NZ_CP075113.1 Protein Homology CDS 2150607 2152247 . - 0 ID=cds-WP_000117492.1;Parent=gene-CCO47_RS10455;Dbxref=GenBank:WP_000117492.1;Name=WP_000117492.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460316.1;locus_tag=CCO47_RS10455;product=medium-chain fatty-acid--CoA ligase;protein_id=WP_000117492.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2152337 2152630 . - . ID=gene-CCO47_RS10460;Name=CCO47_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10460;old_locus_tag=CCO47_10460 NZ_CP075113.1 Protein Homology CDS 2152337 2152630 . - 0 ID=cds-WP_000093361.1;Parent=gene-CCO47_RS10460;Dbxref=GenBank:WP_000093361.1;Name=WP_000093361.1;Ontology_term=GO:0005506,GO:0009055,GO:0051539;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460317.1;locus_tag=CCO47_RS10460;product=ferredoxin family protein;protein_id=WP_000093361.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2152627 2153913 . - . ID=gene-CCO47_RS10465;Name=CCO47_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10465;old_locus_tag=CCO47_10465 NZ_CP075113.1 Protein Homology CDS 2152627 2153913 . - 0 ID=cds-WP_001278555.1;Parent=gene-CCO47_RS10465;Dbxref=GenBank:WP_001278555.1;Name=WP_001278555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=CCO47_RS10465;product=FAD-dependent oxidoreductase;protein_id=WP_001278555.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2153970 2154905 . - . ID=gene-CCO47_RS10470;Name=CCO47_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10470;old_locus_tag=CCO47_10470 NZ_CP075113.1 Protein Homology CDS 2153970 2154905 . - 0 ID=cds-WP_001015885.1;Parent=gene-CCO47_RS10470;Dbxref=GenBank:WP_001015885.1;Name=WP_001015885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460319.1;locus_tag=CCO47_RS10470;product=electron transfer flavoprotein subunit alpha;protein_id=WP_001015885.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2154927 2155691 . - . ID=gene-CCO47_RS10475;Name=CCO47_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10475;old_locus_tag=CCO47_10475 NZ_CP075113.1 Protein Homology CDS 2154927 2155691 . - 0 ID=cds-WP_000692101.1;Parent=gene-CCO47_RS10475;Dbxref=GenBank:WP_000692101.1;Name=WP_000692101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460320.1;locus_tag=CCO47_RS10475;product=electron transfer flavoprotein;protein_id=WP_000692101.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2156184 2156738 . + . ID=gene-CCO47_RS10480;Name=CCO47_RS10480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS10480;old_locus_tag=CCO47_10480;partial=true;pseudo=true;start_range=.,2156184 NZ_CP075113.1 Protein Homology CDS 2156184 2156738 . + 0 ID=cds-CCO47_RS10480;Parent=gene-CCO47_RS10480;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460321.1;locus_tag=CCO47_RS10480;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,2156184;transl_table=11 NZ_CP075113.1 RefSeq gene 2156814 2157965 . - . ID=gene-CCO47_RS10485;Name=CCO47_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10485;old_locus_tag=CCO47_10485 NZ_CP075113.1 Protein Homology CDS 2156814 2157965 . - 0 ID=cds-WP_000347818.1;Parent=gene-CCO47_RS10485;Dbxref=GenBank:WP_000347818.1;Name=WP_000347818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460322.1;locus_tag=CCO47_RS10485;product=acyl-CoA dehydrogenase;protein_id=WP_000347818.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2157979 2159574 . - . ID=gene-CCO47_RS10490;Name=CCO47_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10490;old_locus_tag=CCO47_10490 NZ_CP075113.1 Protein Homology CDS 2157979 2159574 . - 0 ID=cds-WP_094912308.1;Parent=gene-CCO47_RS10490;Dbxref=GenBank:WP_094912308.1;Name=WP_094912308.1;Ontology_term=GO:0008410,GO:0016782;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=CCO47_RS10490;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_094912308.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2159728 2160486 . - . ID=gene-CCO47_RS10495;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=CCO47_RS10495;old_locus_tag=CCO47_10495 NZ_CP075113.1 Protein Homology CDS 2159728 2160486 . - 0 ID=cds-WP_000860224.1;Parent=gene-CCO47_RS10495;Dbxref=GenBank:WP_000860224.1;Name=WP_000860224.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460324.1;locus_tag=CCO47_RS10495;product=type I 3-dehydroquinate dehydratase;protein_id=WP_000860224.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2160531 2161397 . - . ID=gene-CCO47_RS10500;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=CCO47_RS10500;old_locus_tag=CCO47_10500 NZ_CP075113.1 Protein Homology CDS 2160531 2161397 . - 0 ID=cds-WP_000383488.1;Parent=gene-CCO47_RS10500;Dbxref=GenBank:WP_000383488.1;Name=WP_000383488.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460325.1;locus_tag=CCO47_RS10500;product=quinate/shikimate dehydrogenase;protein_id=WP_000383488.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2161464 2162699 . - . ID=gene-CCO47_RS10505;Name=CCO47_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10505;old_locus_tag=CCO47_10505 NZ_CP075113.1 Protein Homology CDS 2161464 2162699 . - 0 ID=cds-WP_000081213.1;Parent=gene-CCO47_RS10505;Dbxref=GenBank:WP_000081213.1;Name=WP_000081213.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460326.1;locus_tag=CCO47_RS10505;product=MFS transporter;protein_id=WP_000081213.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2163063 2164205 . - . ID=gene-CCO47_RS10510;Name=CCO47_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10510;old_locus_tag=CCO47_10510 NZ_CP075113.1 Protein Homology CDS 2163063 2164205 . - 0 ID=cds-WP_000797674.1;Parent=gene-CCO47_RS10510;Dbxref=GenBank:WP_000797674.1;Name=WP_000797674.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460327.1;locus_tag=CCO47_RS10510;product=MFS transporter;protein_id=WP_000797674.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2164346 2164705 . - . ID=gene-CCO47_RS10515;Name=CCO47_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10515;old_locus_tag=CCO47_10515 NZ_CP075113.1 Protein Homology CDS 2164346 2164705 . - 0 ID=cds-WP_000980452.1;Parent=gene-CCO47_RS10515;Dbxref=GenBank:WP_000980452.1;Name=WP_000980452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460328.1;locus_tag=CCO47_RS10515;product=YdiL family protein;protein_id=WP_000980452.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2164873 2164980 . - . ID=gene-CCO47_RS10520;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=CCO47_RS10520;old_locus_tag=CCO47_10520 NZ_CP075113.1 cmsearch antisense_RNA 2164873 2164980 . - . ID=rna-CCO47_RS10520;Parent=gene-CCO47_RS10520;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS10520;product=antisense sRNA RprA NZ_CP075113.1 cmsearch exon 2164873 2164980 . - . ID=exon-CCO47_RS10520-1;Parent=rna-CCO47_RS10520;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS10520;product=antisense sRNA RprA NZ_CP075113.1 RefSeq gene 2165163 2166281 . - . ID=gene-CCO47_RS10525;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=CCO47_RS10525;old_locus_tag=CCO47_10525 NZ_CP075113.1 Protein Homology CDS 2165163 2166281 . - 0 ID=cds-WP_000248615.1;Parent=gene-CCO47_RS10525;Dbxref=GenBank:WP_000248615.1;Name=WP_000248615.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460329.1;locus_tag=CCO47_RS10525;product=AI-2E family transporter YdiK;protein_id=WP_000248615.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2166546 2169602 . + . ID=gene-CCO47_RS10530;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=CCO47_RS10530;old_locus_tag=CCO47_10530 NZ_CP075113.1 Protein Homology CDS 2166546 2169602 . + 0 ID=cds-WP_000612922.1;Parent=gene-CCO47_RS10530;Dbxref=GenBank:WP_000612922.1;Name=WP_000612922.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase (NAD+) activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460330.1;locus_tag=CCO47_RS10530;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_000612922.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2169599 2170009 . + . ID=gene-CCO47_RS10535;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=CCO47_RS10535;old_locus_tag=CCO47_10535 NZ_CP075113.1 Protein Homology CDS 2169599 2170009 . + 0 ID=cds-WP_000637930.1;Parent=gene-CCO47_RS10535;Dbxref=GenBank:WP_000637930.1;Name=WP_000637930.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=CCO47_RS10535;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637930.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2170108 2170296 . + . ID=gene-CCO47_RS10540;Name=CCO47_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10540;old_locus_tag=CCO47_10540 NZ_CP075113.1 Protein Homology CDS 2170108 2170296 . + 0 ID=cds-WP_001537749.1;Parent=gene-CCO47_RS10540;Dbxref=GenBank:WP_001537749.1;Name=WP_001537749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=CCO47_RS10540;product=YdiH family protein;protein_id=WP_001537749.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2170584 2171930 . - . ID=gene-CCO47_RS10545;Name=CCO47_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10545;old_locus_tag=CCO47_10545 NZ_CP075113.1 Protein Homology CDS 2170584 2171930 . - 0 ID=cds-WP_000261863.1;Parent=gene-CCO47_RS10545;Dbxref=GenBank:WP_000261863.1;Name=WP_000261863.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460333.1;locus_tag=CCO47_RS10545;product=L-cystine transporter;protein_id=WP_000261863.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2172357 2172725 . + . ID=gene-CCO47_RS10550;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=CCO47_RS10550;old_locus_tag=CCO47_10550 NZ_CP075113.1 Protein Homology CDS 2172357 2172725 . + 0 ID=cds-WP_000418970.1;Parent=gene-CCO47_RS10550;Dbxref=GenBank:WP_000418970.1;Name=WP_000418970.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460334.1;locus_tag=CCO47_RS10550;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000418970.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2172734 2174221 . + . ID=gene-CCO47_RS10555;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=CCO47_RS10555;old_locus_tag=CCO47_10555 NZ_CP075113.1 Protein Homology CDS 2172734 2174221 . + 0 ID=cds-WP_000089384.1;Parent=gene-CCO47_RS10555;Dbxref=GenBank:WP_000089384.1;Name=WP_000089384.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=CCO47_RS10555;product=Fe-S cluster assembly protein SufB;protein_id=WP_000089384.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2174238 2174984 . + . ID=gene-CCO47_RS10560;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=CCO47_RS10560;old_locus_tag=CCO47_10560 NZ_CP075113.1 Protein Homology CDS 2174238 2174984 . + 0 ID=cds-WP_000948904.1;Parent=gene-CCO47_RS10560;Dbxref=GenBank:WP_000948904.1;Name=WP_000948904.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=CCO47_RS10560;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000948904.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2174959 2176230 . + . ID=gene-CCO47_RS10565;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=CCO47_RS10565;old_locus_tag=CCO47_10565 NZ_CP075113.1 Protein Homology CDS 2174959 2176230 . + 0 ID=cds-WP_000907943.1;Parent=gene-CCO47_RS10565;Dbxref=GenBank:WP_000907943.1;Name=WP_000907943.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460337.1;locus_tag=CCO47_RS10565;product=Fe-S cluster assembly protein SufD;protein_id=WP_000907943.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2176227 2177447 . + . ID=gene-CCO47_RS10570;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=CCO47_RS10570;old_locus_tag=CCO47_10570 NZ_CP075113.1 Protein Homology CDS 2176227 2177447 . + 0 ID=cds-WP_000143871.1;Parent=gene-CCO47_RS10570;Dbxref=GenBank:WP_000143871.1;Name=WP_000143871.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460338.1;locus_tag=CCO47_RS10570;product=cysteine desulfurase SufS;protein_id=WP_000143871.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2177460 2177876 . + . ID=gene-CCO47_RS10575;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=CCO47_RS10575;old_locus_tag=CCO47_10575 NZ_CP075113.1 Protein Homology CDS 2177460 2177876 . + 0 ID=cds-WP_000729468.1;Parent=gene-CCO47_RS10575;Dbxref=GenBank:WP_000729468.1;Name=WP_000729468.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460339.1;locus_tag=CCO47_RS10575;product=cysteine desulfuration protein SufE;protein_id=WP_000729468.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2178031 2179032 . + . ID=gene-CCO47_RS10580;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=CCO47_RS10580;old_locus_tag=CCO47_10580 NZ_CP075113.1 Protein Homology CDS 2178031 2179032 . + 0 ID=cds-WP_000817059.1;Parent=gene-CCO47_RS10580;Dbxref=GenBank:WP_000817059.1;Name=WP_000817059.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=CCO47_RS10580;product=L%2CD-transpeptidase LdtE;protein_id=WP_000817059.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2179098 2179340 . - . ID=gene-CCO47_RS10585;Name=CCO47_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10585;old_locus_tag=CCO47_10585 NZ_CP075113.1 Protein Homology CDS 2179098 2179340 . - 0 ID=cds-WP_001082333.1;Parent=gene-CCO47_RS10585;Dbxref=GenBank:WP_001082333.1;Name=WP_001082333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082333.1;locus_tag=CCO47_RS10585;product=major outer membrane lipoprotein;protein_id=WP_001082333.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2179423 2179659 . - . ID=gene-CCO47_RS10590;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=CCO47_RS10590;old_locus_tag=CCO47_10590 NZ_CP075113.1 Protein Homology CDS 2179423 2179659 . - 0 ID=cds-WP_001082307.1;Parent=gene-CCO47_RS10590;Dbxref=GenBank:WP_001082307.1;Name=WP_001082307.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=CCO47_RS10590;product=murein lipoprotein Lpp;protein_id=WP_001082307.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2179970 2181382 . - . ID=gene-CCO47_RS10595;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=CCO47_RS10595;old_locus_tag=CCO47_10595 NZ_CP075113.1 Protein Homology CDS 2179970 2181382 . - 0 ID=cds-WP_000751447.1;Parent=gene-CCO47_RS10595;Dbxref=GenBank:WP_000751447.1;Name=WP_000751447.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=CCO47_RS10595;product=pyruvate kinase PykF;protein_id=WP_000751447.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2181390 2181620 . - . ID=gene-CCO47_RS24550;Name=ynhH;gbkey=Gene;gene=ynhH;gene_biotype=protein_coding;locus_tag=CCO47_RS24550 NZ_CP075113.1 Protein Homology CDS 2181390 2181620 . - 0 ID=cds-WP_418143684.1;Parent=gene-CCO47_RS24550;Dbxref=GenBank:WP_418143684.1;Name=WP_418143684.1;gbkey=CDS;gene=ynhH;inference=COORDINATES: protein motif:HMM:NF049534.1;locus_tag=CCO47_RS24550;product=protein YnhH;protein_id=WP_418143684.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2181784 2183127 . - . ID=gene-CCO47_RS10600;Name=CCO47_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10600;old_locus_tag=CCO47_10600 NZ_CP075113.1 Protein Homology CDS 2181784 2183127 . - 0 ID=cds-WP_000756074.1;Parent=gene-CCO47_RS10600;Dbxref=GenBank:WP_000756074.1;Name=WP_000756074.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460344.1;locus_tag=CCO47_RS10600;product=APC family permease;protein_id=WP_000756074.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2183149 2184042 . - . ID=gene-CCO47_RS10605;Name=CCO47_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10605;old_locus_tag=CCO47_10605 NZ_CP075113.1 Protein Homology CDS 2183149 2184042 . - 0 ID=cds-WP_001000514.1;Parent=gene-CCO47_RS10605;Dbxref=GenBank:WP_001000514.1;Name=WP_001000514.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=CCO47_RS10605;product=proline iminopeptidase-family hydrolase;protein_id=WP_001000514.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2184101 2184838 . - . ID=gene-CCO47_RS10610;Name=CCO47_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10610;old_locus_tag=CCO47_10610 NZ_CP075113.1 Protein Homology CDS 2184101 2184838 . - 0 ID=cds-WP_000697179.1;Parent=gene-CCO47_RS10610;Dbxref=GenBank:WP_000697179.1;Name=WP_000697179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=CCO47_RS10610;product=glutamine amidotransferase;protein_id=WP_000697179.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2184850 2186076 . - . ID=gene-CCO47_RS10615;Name=CCO47_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10615;old_locus_tag=CCO47_10615 NZ_CP075113.1 Protein Homology CDS 2184850 2186076 . - 0 ID=cds-WP_094912312.1;Parent=gene-CCO47_RS10615;Dbxref=GenBank:WP_094912312.1;Name=WP_094912312.1;Ontology_term=GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=CCO47_RS10615;product=PfkB family carbohydrate kinase;protein_id=WP_094912312.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2186399 2189461 . - . ID=gene-CCO47_RS10620;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=CCO47_RS10620;old_locus_tag=CCO47_10620 NZ_CP075113.1 Protein Homology CDS 2186399 2189461 . - 0 ID=cds-WP_000002382.1;Parent=gene-CCO47_RS10620;Dbxref=GenBank:WP_000002382.1;Name=WP_000002382.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;gene=ttrA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=CCO47_RS10620;product=tetrathionate reductase subunit TtrA;protein_id=WP_000002382.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2189454 2190476 . - . ID=gene-CCO47_RS10625;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=protein_coding;locus_tag=CCO47_RS10625;old_locus_tag=CCO47_10625 NZ_CP075113.1 Protein Homology CDS 2189454 2190476 . - 0 ID=cds-WP_000149758.1;Parent=gene-CCO47_RS10625;Dbxref=GenBank:WP_000149758.1;Name=WP_000149758.1;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460349.1;locus_tag=CCO47_RS10625;product=tetrathionate reductase subunit TtrC;protein_id=WP_000149758.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2190477 2191211 . - . ID=gene-CCO47_RS10630;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=protein_coding;locus_tag=CCO47_RS10630;old_locus_tag=CCO47_10630 NZ_CP075113.1 Protein Homology CDS 2190477 2191211 . - 0 ID=cds-WP_001523928.1;Parent=gene-CCO47_RS10630;Dbxref=GenBank:WP_001523928.1;Name=WP_001523928.1;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518945.1;locus_tag=CCO47_RS10630;product=tetrathionate reductase subunit TtrB;protein_id=WP_001523928.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2191393 2193171 . + . ID=gene-CCO47_RS10635;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=CCO47_RS10635;old_locus_tag=CCO47_10635 NZ_CP075113.1 Protein Homology CDS 2191393 2193171 . + 0 ID=cds-WP_001214400.1;Parent=gene-CCO47_RS10635;Dbxref=GenBank:WP_001214400.1;Name=WP_001214400.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=CCO47_RS10635;product=tetrathionate respiration histidine kinase TtrS;protein_id=WP_001214400.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2193146 2193766 . + . ID=gene-CCO47_RS10640;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=CCO47_RS10640;old_locus_tag=CCO47_10640 NZ_CP075113.1 Protein Homology CDS 2193146 2193766 . + 0 ID=cds-WP_000190927.1;Parent=gene-CCO47_RS10640;Dbxref=GenBank:WP_000190927.1;Name=WP_000190927.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460352.3;locus_tag=CCO47_RS10640;product=tetrathionate respiration response regulator TtrR;protein_id=WP_000190927.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2193864 2194076 . + . ID=gene-CCO47_RS10645;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=CCO47_RS10645;old_locus_tag=CCO47_10645 NZ_CP075113.1 Protein Homology CDS 2193864 2194076 . + 0 ID=cds-WP_000165779.1;Parent=gene-CCO47_RS10645;Dbxref=GenBank:WP_000165779.1;Name=WP_000165779.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460353.1;locus_tag=CCO47_RS10645;product=fumarate hydratase FumD;protein_id=WP_000165779.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2194198 2195157 . - . ID=gene-CCO47_RS10650;Name=mlrB;gbkey=Gene;gene=mlrB;gene_biotype=protein_coding;locus_tag=CCO47_RS10650;old_locus_tag=CCO47_10650 NZ_CP075113.1 Protein Homology CDS 2194198 2195157 . - 0 ID=cds-WP_001060733.1;Parent=gene-CCO47_RS10650;Dbxref=GenBank:WP_001060733.1;Name=WP_001060733.1;gbkey=CDS;gene=mlrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460354.1;locus_tag=CCO47_RS10650;product=transcriptional regulator MlrB;protein_id=WP_001060733.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2195329 2196056 . - . ID=gene-CCO47_RS10655;Name=CCO47_RS10655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS10655;old_locus_tag=CCO47_10655;pseudo=true NZ_CP075113.1 Protein Homology CDS 2195329 2196056 . - 0 ID=cds-CCO47_RS10655;Parent=gene-CCO47_RS10655;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460355.1;locus_tag=CCO47_RS10655;product=MerR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2196235 2196873 . - . ID=gene-CCO47_RS10660;Name=CCO47_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10660;old_locus_tag=CCO47_10660 NZ_CP075113.1 Protein Homology CDS 2196235 2196873 . - 0 ID=cds-WP_000666335.1;Parent=gene-CCO47_RS10660;Dbxref=GenBank:WP_000666335.1;Name=WP_000666335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460356.1;locus_tag=CCO47_RS10660;product=two component system response regulator;protein_id=WP_000666335.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2196904 2199666 . - . ID=gene-CCO47_RS10665;Name=CCO47_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10665;old_locus_tag=CCO47_10665 NZ_CP075113.1 Protein Homology CDS 2196904 2199666 . - 0 ID=cds-WP_001050774.1;Parent=gene-CCO47_RS10665;Dbxref=GenBank:WP_001050774.1;Name=WP_001050774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=CCO47_RS10665;product=two component system sensor kinase;protein_id=WP_001050774.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2200067 2200468 . + . ID=gene-CCO47_RS10670;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=CCO47_RS10670;old_locus_tag=CCO47_10670 NZ_CP075113.1 Protein Homology CDS 2200067 2200468 . + 0 ID=cds-WP_001562740.1;Parent=gene-CCO47_RS10670;Dbxref=GenBank:WP_001562740.1;Name=WP_001562740.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=CCO47_RS10670;product=SPI-2 type III secretion system protein SpiC;protein_id=WP_001562740.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2200470 2201963 . + . ID=gene-CCO47_RS10675;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=CCO47_RS10675;old_locus_tag=CCO47_10675 NZ_CP075113.1 Protein Homology CDS 2200470 2201963 . + 0 ID=cds-WP_000261279.1;Parent=gene-CCO47_RS10675;Dbxref=GenBank:WP_000261279.1;Name=WP_000261279.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460359.1;locus_tag=CCO47_RS10675;product=SPI-2 type III secretion system protein SpiA;protein_id=WP_000261279.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2201944 2203155 . + . ID=gene-CCO47_RS10680;Name=ssaD;gbkey=Gene;gene=ssaD;gene_biotype=protein_coding;locus_tag=CCO47_RS10680;old_locus_tag=CCO47_10680 NZ_CP075113.1 Protein Homology CDS 2201944 2203155 . + 0 ID=cds-WP_000323791.1;Parent=gene-CCO47_RS10680;Dbxref=GenBank:WP_000323791.1;Name=WP_000323791.1;gbkey=CDS;gene=ssaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460360.1;locus_tag=CCO47_RS10680;product=SctD family type III secretion system inner membrane ring subunit SsaD;protein_id=WP_000323791.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2203163 2203405 . + . ID=gene-CCO47_RS10685;Name=ssaE;gbkey=Gene;gene=ssaE;gene_biotype=protein_coding;locus_tag=CCO47_RS10685;old_locus_tag=CCO47_10685 NZ_CP075113.1 Protein Homology CDS 2203163 2203405 . + 0 ID=cds-WP_000210202.1;Parent=gene-CCO47_RS10685;Dbxref=GenBank:WP_000210202.1;Name=WP_000210202.1;gbkey=CDS;gene=ssaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460361.1;locus_tag=CCO47_RS10685;product=YscE family type III secretion system co-chaperone SsaE;protein_id=WP_000210202.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2203608 2203934 . + . ID=gene-CCO47_RS10690;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=CCO47_RS10690;old_locus_tag=CCO47_10690 NZ_CP075113.1 Protein Homology CDS 2203608 2203934 . + 0 ID=cds-WP_000972855.1;Parent=gene-CCO47_RS10690;Dbxref=GenBank:WP_000972855.1;Name=WP_000972855.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460362.1;locus_tag=CCO47_RS10690;product=SPI-2 type III secretion system chaperone SseA;protein_id=WP_000972855.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2203941 2204531 . + . ID=gene-CCO47_RS10695;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=CCO47_RS10695;old_locus_tag=CCO47_10695 NZ_CP075113.1 Protein Homology CDS 2203941 2204531 . + 0 ID=cds-WP_000094422.1;Parent=gene-CCO47_RS10695;Dbxref=GenBank:WP_000094422.1;Name=WP_000094422.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460363.1;locus_tag=CCO47_RS10695;product=SPI-2 type III secretion system translocon protein SseB;protein_id=WP_000094422.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2204528 2205001 . + . ID=gene-CCO47_RS10700;Name=sscA;gbkey=Gene;gene=sscA;gene_biotype=protein_coding;locus_tag=CCO47_RS10700;old_locus_tag=CCO47_10700 NZ_CP075113.1 Protein Homology CDS 2204528 2205001 . + 0 ID=cds-WP_000711026.1;Parent=gene-CCO47_RS10700;Dbxref=GenBank:WP_000711026.1;Name=WP_000711026.1;gbkey=CDS;gene=sscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460364.1;locus_tag=CCO47_RS10700;product=SycD/LcrH family type III secretion system chaperone SscA;protein_id=WP_000711026.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2205004 2206458 . + . ID=gene-CCO47_RS10705;Name=sseC;gbkey=Gene;gene=sseC;gene_biotype=protein_coding;locus_tag=CCO47_RS10705;old_locus_tag=CCO47_10705 NZ_CP075113.1 Protein Homology CDS 2205004 2206458 . + 0 ID=cds-WP_001079750.1;Parent=gene-CCO47_RS10705;Dbxref=GenBank:WP_001079750.1;Name=WP_001079750.1;gbkey=CDS;gene=sseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460365.1;locus_tag=CCO47_RS10705;product=SPI-2 type III secretion system translocon protein SseC;protein_id=WP_001079750.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2206474 2207061 . + . ID=gene-CCO47_RS10710;Name=sseD;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=CCO47_RS10710;old_locus_tag=CCO47_10710 NZ_CP075113.1 Protein Homology CDS 2206474 2207061 . + 0 ID=cds-WP_000388329.1;Parent=gene-CCO47_RS10710;Dbxref=GenBank:WP_000388329.1;Name=WP_000388329.1;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460366.1;locus_tag=CCO47_RS10710;product=SPI-2 type III secretion system translocon protein SseD;protein_id=WP_000388329.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2207064 2207480 . + . ID=gene-CCO47_RS10715;Name=sseE;gbkey=Gene;gene=sseE;gene_biotype=protein_coding;locus_tag=CCO47_RS10715;old_locus_tag=CCO47_10715 NZ_CP075113.1 Protein Homology CDS 2207064 2207480 . + 0 ID=cds-WP_000249606.1;Parent=gene-CCO47_RS10715;Dbxref=GenBank:WP_000249606.1;Name=WP_000249606.1;gbkey=CDS;gene=sseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460367.1;locus_tag=CCO47_RS10715;product=LcrR family type III secretion system chaperone SseE;protein_id=WP_000249606.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2207532 2207966 . + . ID=gene-CCO47_RS10720;Name=sscB;gbkey=Gene;gene=sscB;gene_biotype=protein_coding;locus_tag=CCO47_RS10720;old_locus_tag=CCO47_10720 NZ_CP075113.1 Protein Homology CDS 2207532 2207966 . + 0 ID=cds-WP_000979963.1;Parent=gene-CCO47_RS10720;Dbxref=GenBank:WP_000979963.1;Name=WP_000979963.1;gbkey=CDS;gene=sscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460368.1;locus_tag=CCO47_RS10720;product=SycD/LcrH family type III secretion system chaperone SscB;protein_id=WP_000979963.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2207982 2208764 . + . ID=gene-CCO47_RS10725;Name=sseF;gbkey=Gene;gene=sseF;gene_biotype=protein_coding;locus_tag=CCO47_RS10725;old_locus_tag=CCO47_10725 NZ_CP075113.1 Protein Homology CDS 2207982 2208764 . + 0 ID=cds-WP_000690716.1;Parent=gene-CCO47_RS10725;Dbxref=GenBank:WP_000690716.1;Name=WP_000690716.1;gbkey=CDS;gene=sseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=CCO47_RS10725;product=type III secretion systems effector SseF;protein_id=WP_000690716.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2208761 2209450 . + . ID=gene-CCO47_RS10730;Name=sseG;gbkey=Gene;gene=sseG;gene_biotype=protein_coding;locus_tag=CCO47_RS10730;old_locus_tag=CCO47_10730 NZ_CP075113.1 Protein Homology CDS 2208761 2209450 . + 0 ID=cds-WP_000805846.1;Parent=gene-CCO47_RS10730;Dbxref=GenBank:WP_000805846.1;Name=WP_000805846.1;Note=SseG%2C from Salmonella pathogenicity island 2%2C is a type III secretion system (T3SS) effector protein.;gbkey=CDS;gene=sseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460370.1;locus_tag=CCO47_RS10730;product=pathogenicity island 2 effector protein SseG;protein_id=WP_000805846.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2209544 2209759 . + . ID=gene-CCO47_RS10735;Name=ssaG;gbkey=Gene;gene=ssaG;gene_biotype=protein_coding;locus_tag=CCO47_RS10735;old_locus_tag=CCO47_10735 NZ_CP075113.1 Protein Homology CDS 2209544 2209759 . + 0 ID=cds-WP_000350226.1;Parent=gene-CCO47_RS10735;Dbxref=GenBank:WP_000350226.1;Name=WP_000350226.1;gbkey=CDS;gene=ssaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460371.1;locus_tag=CCO47_RS10735;product=type III secretion system needle filament protein SsaG;protein_id=WP_000350226.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2209737 2210027 . + . ID=gene-CCO47_RS10740;Name=CCO47_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10740;old_locus_tag=CCO47_10740 NZ_CP075113.1 Protein Homology CDS 2209737 2210027 . + 0 ID=cds-WP_000444713.1;Parent=gene-CCO47_RS10740;Dbxref=GenBank:WP_000444713.1;Name=WP_000444713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=CCO47_RS10740;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=WP_000444713.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2210039 2210287 . + . ID=gene-CCO47_RS10745;Name=ssaI;gbkey=Gene;gene=ssaI;gene_biotype=protein_coding;locus_tag=CCO47_RS10745;old_locus_tag=CCO47_10745 NZ_CP075113.1 Protein Homology CDS 2210039 2210287 . + 0 ID=cds-WP_001574409.1;Parent=gene-CCO47_RS10745;Dbxref=GenBank:WP_001574409.1;Name=WP_001574409.1;gbkey=CDS;gene=ssaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460373.1;locus_tag=CCO47_RS10745;product=SctI family type III secretion system inner rod subunit SsaI;protein_id=WP_001574409.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2210284 2211033 . + . ID=gene-CCO47_RS10750;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=CCO47_RS10750;old_locus_tag=CCO47_10750 NZ_CP075113.1 Protein Homology CDS 2210284 2211033 . + 0 ID=cds-WP_000862875.1;Parent=gene-CCO47_RS10750;Dbxref=GenBank:WP_000862875.1;Name=WP_000862875.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460374.1;locus_tag=CCO47_RS10750;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;protein_id=WP_000862875.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2211051 2211599 . + . ID=gene-CCO47_RS10755;Name=CCO47_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10755;old_locus_tag=CCO47_10755 NZ_CP075113.1 Protein Homology CDS 2211051 2211599 . + 0 ID=cds-WP_001526945.1;Parent=gene-CCO47_RS10755;Dbxref=GenBank:WP_001526945.1;Name=WP_001526945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460375.1;locus_tag=CCO47_RS10755;product=type III secretion system domain-containing protein;protein_id=WP_001526945.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2211596 2212270 . + . ID=gene-CCO47_RS10760;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=CCO47_RS10760;old_locus_tag=CCO47_10760 NZ_CP075113.1 Protein Homology CDS 2211596 2212270 . + 0 ID=cds-WP_000011203.1;Parent=gene-CCO47_RS10760;Dbxref=GenBank:WP_000011203.1;Name=WP_000011203.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460376.1;locus_tag=CCO47_RS10760;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=WP_000011203.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2212236 2213252 . + . ID=gene-CCO47_RS10765;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=CCO47_RS10765;old_locus_tag=CCO47_10765 NZ_CP075113.1 Protein Homology CDS 2212236 2213252 . + 0 ID=cds-WP_000238880.1;Parent=gene-CCO47_RS10765;Dbxref=GenBank:WP_000238880.1;Name=WP_000238880.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=CCO47_RS10765;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=WP_000238880.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2213310 2213678 . + . ID=gene-CCO47_RS10770;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=CCO47_RS10770;old_locus_tag=CCO47_10770 NZ_CP075113.1 Protein Homology CDS 2213310 2213678 . + 0 ID=cds-WP_000383703.1;Parent=gene-CCO47_RS10770;Dbxref=GenBank:WP_000383703.1;Name=WP_000383703.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460378.1;locus_tag=CCO47_RS10770;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=WP_000383703.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2213663 2215708 . + . ID=gene-CCO47_RS10775;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=CCO47_RS10775;old_locus_tag=CCO47_10775 NZ_CP075113.1 Protein Homology CDS 2213663 2215708 . + 0 ID=cds-WP_001258231.1;Parent=gene-CCO47_RS10775;Dbxref=GenBank:WP_001258231.1;Name=WP_001258231.1;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460379.1;locus_tag=CCO47_RS10775;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=WP_001258231.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2215698 2216999 . + . ID=gene-CCO47_RS10780;Name=ssaN;gbkey=Gene;gene=ssaN;gene_biotype=protein_coding;locus_tag=CCO47_RS10780;old_locus_tag=CCO47_10780 NZ_CP075113.1 Protein Homology CDS 2215698 2216999 . + 0 ID=cds-WP_000787214.1;Parent=gene-CCO47_RS10780;Dbxref=GenBank:WP_000787214.1;Name=WP_000787214.1;gbkey=CDS;gene=ssaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460380.1;locus_tag=CCO47_RS10780;product=SctN family type III secretion system ATPase SsaN;protein_id=WP_000787214.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2217002 2217379 . + . ID=gene-CCO47_RS10785;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=CCO47_RS10785;old_locus_tag=CCO47_10785 NZ_CP075113.1 Protein Homology CDS 2217002 2217379 . + 0 ID=cds-WP_000449091.1;Parent=gene-CCO47_RS10785;Dbxref=GenBank:WP_000449091.1;Name=WP_000449091.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460381.1;locus_tag=CCO47_RS10785;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=WP_000449091.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2217360 2217734 . + . ID=gene-CCO47_RS10790;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=CCO47_RS10790;old_locus_tag=CCO47_10790 NZ_CP075113.1 Protein Homology CDS 2217360 2217734 . + 0 ID=cds-WP_001223304.1;Parent=gene-CCO47_RS10790;Dbxref=GenBank:WP_001223304.1;Name=WP_001223304.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460382.1;locus_tag=CCO47_RS10790;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=WP_001223304.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2217715 2218683 . + . ID=gene-CCO47_RS10795;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=CCO47_RS10795;old_locus_tag=CCO47_10795 NZ_CP075113.1 Protein Homology CDS 2217715 2218683 . + 0 ID=cds-WP_000944195.1;Parent=gene-CCO47_RS10795;Dbxref=GenBank:WP_000944195.1;Name=WP_000944195.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460383.1;locus_tag=CCO47_RS10795;product=SPI-2 type III secretion system cytoplasmic ring protein SsaQ;protein_id=WP_000944195.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2218751 2219398 . + . ID=gene-CCO47_RS10800;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;locus_tag=CCO47_RS10800;old_locus_tag=CCO47_10800 NZ_CP075113.1 Protein Homology CDS 2218751 2219398 . + 0 ID=cds-WP_000056367.1;Parent=gene-CCO47_RS10800;Dbxref=GenBank:WP_000056367.1;Name=WP_000056367.1;gbkey=CDS;gene=ssaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460384.1;locus_tag=CCO47_RS10800;product=SPI-2 type III secretion system export apparatus protein SsaR;protein_id=WP_000056367.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2219395 2219661 . + . ID=gene-CCO47_RS10805;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=CCO47_RS10805;old_locus_tag=CCO47_10805 NZ_CP075113.1 Protein Homology CDS 2219395 2219661 . + 0 ID=cds-WP_000999979.1;Parent=gene-CCO47_RS10805;Dbxref=GenBank:WP_000999979.1;Name=WP_000999979.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460385.1;locus_tag=CCO47_RS10805;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=WP_000999979.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2219662 2220441 . + . ID=gene-CCO47_RS10810;Name=ssaT;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=CCO47_RS10810;old_locus_tag=CCO47_10810 NZ_CP075113.1 Protein Homology CDS 2219662 2220441 . + 0 ID=cds-WP_000068761.1;Parent=gene-CCO47_RS10810;Dbxref=GenBank:WP_000068761.1;Name=WP_000068761.1;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460386.1;locus_tag=CCO47_RS10810;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=WP_000068761.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2220438 2221496 . + . ID=gene-CCO47_RS10815;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=protein_coding;locus_tag=CCO47_RS10815;old_locus_tag=CCO47_10815 NZ_CP075113.1 Protein Homology CDS 2220438 2221496 . + 0 ID=cds-WP_001291719.1;Parent=gene-CCO47_RS10815;Dbxref=GenBank:WP_001291719.1;Name=WP_001291719.1;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460387.1;locus_tag=CCO47_RS10815;product=SPI-2 type III secretion system apparatus protein SsaU;protein_id=WP_001291719.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2221654 2221730 . - . ID=gene-CCO47_RS10820;Name=CCO47_RS10820;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS10820;old_locus_tag=CCO47_10820 NZ_CP075113.1 tRNAscan-SE tRNA 2221654 2221730 . - . ID=rna-CCO47_RS10820;Parent=gene-CCO47_RS10820;anticodon=(pos:complement(2221694..2221696));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS10820;product=tRNA-Val NZ_CP075113.1 tRNAscan-SE exon 2221654 2221730 . - . ID=exon-CCO47_RS10820-1;Parent=rna-CCO47_RS10820;anticodon=(pos:complement(2221694..2221696));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS10820;product=tRNA-Val NZ_CP075113.1 RefSeq gene 2221741 2221817 . - . ID=gene-CCO47_RS10825;Name=CCO47_RS10825;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS10825;old_locus_tag=CCO47_10825 NZ_CP075113.1 tRNAscan-SE tRNA 2221741 2221817 . - . ID=rna-CCO47_RS10825;Parent=gene-CCO47_RS10825;anticodon=(pos:complement(2221781..2221783));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS10825;product=tRNA-Val NZ_CP075113.1 tRNAscan-SE exon 2221741 2221817 . - . ID=exon-CCO47_RS10825-1;Parent=rna-CCO47_RS10825;anticodon=(pos:complement(2221781..2221783));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS10825;product=tRNA-Val NZ_CP075113.1 RefSeq gene 2221969 2223342 . - . ID=gene-CCO47_RS10830;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=CCO47_RS10830;old_locus_tag=CCO47_10830 NZ_CP075113.1 Protein Homology CDS 2221969 2223342 . - 0 ID=cds-WP_001175077.1;Parent=gene-CCO47_RS10830;Dbxref=GenBank:WP_001175077.1;Name=WP_001175077.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460388.2;locus_tag=CCO47_RS10830;product=multidrug efflux MATE transporter MdtK;protein_id=WP_001175077.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2223559 2224200 . + . ID=gene-CCO47_RS10835;Name=CCO47_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10835;old_locus_tag=CCO47_10835 NZ_CP075113.1 Protein Homology CDS 2223559 2224200 . + 0 ID=cds-WP_000493971.1;Parent=gene-CCO47_RS10835;Dbxref=GenBank:WP_000493971.1;Name=WP_000493971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460389.1;locus_tag=CCO47_RS10835;product=riboflavin synthase;protein_id=WP_000493971.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2224242 2225390 . - . ID=gene-CCO47_RS10840;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=CCO47_RS10840;old_locus_tag=CCO47_10840 NZ_CP075113.1 Protein Homology CDS 2224242 2225390 . - 0 ID=cds-WP_000098879.1;Parent=gene-CCO47_RS10840;Dbxref=GenBank:WP_000098879.1;Name=WP_000098879.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460390.1;locus_tag=CCO47_RS10840;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_000098879.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2225680 2226885 . - . ID=gene-CCO47_RS10845;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=CCO47_RS10845;old_locus_tag=CCO47_10845 NZ_CP075113.1 Protein Homology CDS 2225680 2226885 . - 0 ID=cds-WP_001182316.1;Parent=gene-CCO47_RS10845;Dbxref=GenBank:WP_001182316.1;Name=WP_001182316.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460391.1;locus_tag=CCO47_RS10845;product=purine nucleoside transporter PunC;protein_id=WP_001182316.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2226998 2227930 . + . ID=gene-CCO47_RS10850;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=CCO47_RS10850;old_locus_tag=CCO47_10850 NZ_CP075113.1 Protein Homology CDS 2226998 2227930 . + 0 ID=cds-WP_000269523.1;Parent=gene-CCO47_RS10850;Dbxref=GenBank:WP_000269523.1;Name=WP_000269523.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=CCO47_RS10850;product=DNA-binding transcriptional activator PunR;protein_id=WP_000269523.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2227927 2228952 . - . ID=gene-CCO47_RS10855;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=CCO47_RS10855;old_locus_tag=CCO47_10855 NZ_CP075113.1 Protein Homology CDS 2227927 2228952 . - 0 ID=cds-WP_000190993.1;Parent=gene-CCO47_RS10855;Dbxref=GenBank:WP_000190993.1;Name=WP_000190993.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=CCO47_RS10855;product=HTH-type transcriptional repressor PurR;protein_id=WP_000190993.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2229248 2229337 . + . ID=gene-CCO47_RS10860;Name=cydH;gbkey=Gene;gene=cydH;gene_biotype=protein_coding;gene_synonym=ynhF;locus_tag=CCO47_RS10860;old_locus_tag=CCO47_10860 NZ_CP075113.1 Protein Homology CDS 2229248 2229337 . + 0 ID=cds-WP_000102277.1;Parent=gene-CCO47_RS10860;Dbxref=GenBank:WP_000102277.1;Name=WP_000102277.1;gbkey=CDS;gene=cydH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=CCO47_RS10860;product=cytochrome bd-I oxidase subunit CydH;protein_id=WP_000102277.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2229420 2230001 . - . ID=gene-CCO47_RS10865;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=CCO47_RS10865;old_locus_tag=CCO47_10865 NZ_CP075113.1 Protein Homology CDS 2229420 2230001 . - 0 ID=cds-WP_000007300.1;Parent=gene-CCO47_RS10865;Dbxref=GenBank:WP_000007300.1;Name=WP_000007300.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460394.1;locus_tag=CCO47_RS10865;product=superoxide dismutase [Fe];protein_id=WP_000007300.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2230128 2230949 . - . ID=gene-CCO47_RS10870;Name=CCO47_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10870;old_locus_tag=CCO47_10870 NZ_CP075113.1 Protein Homology CDS 2230128 2230949 . - 0 ID=cds-WP_201792696.1;Parent=gene-CCO47_RS10870;Dbxref=GenBank:WP_201792696.1;Name=WP_201792696.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310391.1;locus_tag=CCO47_RS10870;product=C40 family peptidase;protein_id=WP_201792696.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2231284 2231631 . + . ID=gene-CCO47_RS10875;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=CCO47_RS10875;old_locus_tag=CCO47_10875 NZ_CP075113.1 Protein Homology CDS 2231284 2231631 . + 0 ID=cds-WP_000108176.1;Parent=gene-CCO47_RS10875;Dbxref=GenBank:WP_000108176.1;Name=WP_000108176.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460396.1;locus_tag=CCO47_RS10875;product=monothiol glutaredoxin 4;protein_id=WP_000108176.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2231709 2232356 . - . ID=gene-CCO47_RS10880;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=CCO47_RS10880;old_locus_tag=CCO47_10880 NZ_CP075113.1 Protein Homology CDS 2231709 2232356 . - 0 ID=cds-WP_001282272.1;Parent=gene-CCO47_RS10880;Dbxref=GenBank:WP_001282272.1;Name=WP_001282272.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460397.1;locus_tag=CCO47_RS10880;product=ribonuclease T;protein_id=WP_001282272.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2232457 2232864 . - . ID=gene-CCO47_RS10885;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=CCO47_RS10885;old_locus_tag=CCO47_10885 NZ_CP075113.1 Protein Homology CDS 2232457 2232864 . - 0 ID=cds-WP_001237787.1;Parent=gene-CCO47_RS10885;Dbxref=GenBank:WP_001237787.1;Name=WP_001237787.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=CCO47_RS10885;product=lactoylglutathione lyase;protein_id=WP_001237787.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2232933 2234030 . - . ID=gene-CCO47_RS10890;Name=nemA;gbkey=Gene;gene=nemA;gene_biotype=protein_coding;locus_tag=CCO47_RS10890;old_locus_tag=CCO47_10890 NZ_CP075113.1 Protein Homology CDS 2232933 2234030 . - 0 ID=cds-WP_000092939.1;Parent=gene-CCO47_RS10890;Dbxref=GenBank:WP_000092939.1;Name=WP_000092939.1;gbkey=CDS;gene=nemA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460399.1;locus_tag=CCO47_RS10890;product=alkene reductase;protein_id=WP_000092939.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2234089 2234688 . - . ID=gene-CCO47_RS10895;Name=CCO47_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10895;old_locus_tag=CCO47_10895 NZ_CP075113.1 Protein Homology CDS 2234089 2234688 . - 0 ID=cds-WP_001041823.1;Parent=gene-CCO47_RS10895;Dbxref=GenBank:WP_001041823.1;Name=WP_001041823.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460400.1;locus_tag=CCO47_RS10895;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001041823.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2234791 2235030 . + . ID=gene-CCO47_RS10900;Name=CCO47_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10900;old_locus_tag=CCO47_10900 NZ_CP075113.1 Protein Homology CDS 2234791 2235030 . + 0 ID=cds-WP_001538148.1;Parent=gene-CCO47_RS10900;Dbxref=GenBank:WP_001538148.1;Name=WP_001538148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460401.1;locus_tag=CCO47_RS10900;product=DUF1289 domain-containing protein;protein_id=WP_001538148.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2235081 2235977 . + . ID=gene-CCO47_RS10905;Name=CCO47_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10905;old_locus_tag=CCO47_10905 NZ_CP075113.1 Protein Homology CDS 2235081 2235977 . + 0 ID=cds-WP_000250727.1;Parent=gene-CCO47_RS10905;Dbxref=GenBank:WP_000250727.1;Name=WP_000250727.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460402.1;locus_tag=CCO47_RS10905;product=aldo/keto reductase;protein_id=WP_000250727.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2236057 2236578 . + . ID=gene-CCO47_RS10910;Name=sodC2;gbkey=Gene;gene=sodC2;gene_biotype=protein_coding;gene_synonym=sodCII;locus_tag=CCO47_RS10910;old_locus_tag=CCO47_10910 NZ_CP075113.1 Protein Homology CDS 2236057 2236578 . + 0 ID=cds-WP_000826822.1;Parent=gene-CCO47_RS10910;Dbxref=GenBank:WP_000826822.1;Name=WP_000826822.1;gbkey=CDS;gene=sodC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=CCO47_RS10910;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=WP_000826822.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2236554 2238593 . - . ID=gene-CCO47_RS10915;Name=CCO47_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10915;old_locus_tag=CCO47_10915 NZ_CP075113.1 Protein Homology CDS 2236554 2238593 . - 0 ID=cds-WP_000777629.1;Parent=gene-CCO47_RS10915;Dbxref=GenBank:WP_000777629.1;Name=WP_000777629.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460404.1;locus_tag=CCO47_RS10915;product=FUSC family protein;protein_id=WP_000777629.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2238593 2239453 . - . ID=gene-CCO47_RS10920;Name=CCO47_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10920;old_locus_tag=CCO47_10920 NZ_CP075113.1 Protein Homology CDS 2238593 2239453 . - 0 ID=cds-WP_001531609.1;Parent=gene-CCO47_RS10920;Dbxref=GenBank:WP_001531609.1;Name=WP_001531609.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218841.1;locus_tag=CCO47_RS10920;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_001531609.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2239456 2239692 . - . ID=gene-CCO47_RS10925;Name=CCO47_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10925;old_locus_tag=CCO47_10925 NZ_CP075113.1 Protein Homology CDS 2239456 2239692 . - 0 ID=cds-WP_000649755.1;Parent=gene-CCO47_RS10925;Dbxref=GenBank:WP_000649755.1;Name=WP_000649755.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460406.1;locus_tag=CCO47_RS10925;product=DUF1656 domain-containing protein;protein_id=WP_000649755.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2239894 2240334 . + . ID=gene-CCO47_RS10930;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=CCO47_RS10930;old_locus_tag=CCO47_10930 NZ_CP075113.1 Protein Homology CDS 2239894 2240334 . + 0 ID=cds-WP_000764553.1;Parent=gene-CCO47_RS10930;Dbxref=GenBank:WP_000764553.1;Name=WP_000764553.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=CCO47_RS10930;product=transcriptional regulator SlyA;protein_id=WP_000764553.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2240382 2240849 . - . ID=gene-CCO47_RS10935;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=CCO47_RS10935;old_locus_tag=CCO47_10935 NZ_CP075113.1 Protein Homology CDS 2240382 2240849 . - 0 ID=cds-WP_000597179.1;Parent=gene-CCO47_RS10935;Dbxref=GenBank:WP_000597179.1;Name=WP_000597179.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460408.1;locus_tag=CCO47_RS10935;product=outer membrane lipoprotein SlyB;protein_id=WP_000597179.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2241122 2242243 . + . ID=gene-CCO47_RS10940;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=CCO47_RS10940;old_locus_tag=CCO47_10940 NZ_CP075113.1 Protein Homology CDS 2241122 2242243 . + 0 ID=cds-WP_000835011.1;Parent=gene-CCO47_RS10940;Dbxref=GenBank:WP_000835011.1;Name=WP_000835011.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460409.1;locus_tag=CCO47_RS10940;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_000835011.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2242331 2242660 . + . ID=gene-CCO47_RS10945;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=CCO47_RS10945;old_locus_tag=CCO47_10945 NZ_CP075113.1 Protein Homology CDS 2242331 2242660 . + 0 ID=cds-WP_001132084.1;Parent=gene-CCO47_RS10945;Dbxref=GenBank:WP_001132084.1;Name=WP_001132084.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=CCO47_RS10945;product=C-type lysozyme inhibitor;protein_id=WP_001132084.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2242719 2243375 . + . ID=gene-CCO47_RS10950;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=CCO47_RS10950;old_locus_tag=CCO47_10950 NZ_CP075113.1 Protein Homology CDS 2242719 2243375 . + 0 ID=cds-WP_001282334.1;Parent=gene-CCO47_RS10950;Dbxref=GenBank:WP_001282334.1;Name=WP_001282334.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=CCO47_RS10950;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282334.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2243502 2244776 . + . ID=gene-CCO47_RS10955;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=CCO47_RS10955;old_locus_tag=CCO47_10955 NZ_CP075113.1 Protein Homology CDS 2243502 2244776 . + 0 ID=cds-WP_000168626.1;Parent=gene-CCO47_RS10955;Dbxref=GenBank:WP_000168626.1;Name=WP_000168626.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=CCO47_RS10955;product=tyrosine--tRNA ligase;protein_id=WP_000168626.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2244836 2245696 . + . ID=gene-CCO47_RS10960;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=pseudogene;locus_tag=CCO47_RS10960;old_locus_tag=CCO47_10960;pseudo=true NZ_CP075113.1 Protein Homology CDS 2244836 2245696 . + 0 ID=cds-CCO47_RS10960;Parent=gene-CCO47_RS10960;Note=internal stop;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=CCO47_RS10960;product=pyridoxal kinase PdxY;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2245755 2246360 . - . ID=gene-CCO47_RS10965;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=CCO47_RS10965;old_locus_tag=CCO47_10965 NZ_CP075113.1 Protein Homology CDS 2245755 2246360 . - 0 ID=cds-WP_000765727.1;Parent=gene-CCO47_RS10965;Dbxref=GenBank:WP_000765727.1;Name=WP_000765727.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=CCO47_RS10965;product=glutathione transferase GstA;protein_id=WP_000765727.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2246464 2247969 . - . ID=gene-CCO47_RS10970;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=CCO47_RS10970;old_locus_tag=CCO47_10970 NZ_CP075113.1 Protein Homology CDS 2246464 2247969 . - 0 ID=cds-WP_000100903.1;Parent=gene-CCO47_RS10970;Dbxref=GenBank:WP_000100903.1;Name=WP_000100903.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460415.1;locus_tag=CCO47_RS10970;product=dipeptide/tripeptide permease DtpA;protein_id=WP_000100903.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2248571 2249206 . - . ID=gene-CCO47_RS10975;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=CCO47_RS10975;old_locus_tag=CCO47_10975 NZ_CP075113.1 Protein Homology CDS 2248571 2249206 . - 0 ID=cds-WP_001030327.1;Parent=gene-CCO47_RS10975;Dbxref=GenBank:WP_001030327.1;Name=WP_001030327.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=CCO47_RS10975;product=endonuclease III;protein_id=WP_001030327.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2249206 2249898 . - . ID=gene-CCO47_RS10980;Name=CCO47_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS10980;old_locus_tag=CCO47_10980 NZ_CP075113.1 Protein Homology CDS 2249206 2249898 . - 0 ID=cds-WP_001289628.1;Parent=gene-CCO47_RS10980;Dbxref=GenBank:WP_001289628.1;Name=WP_001289628.1;Ontology_term=GO:0022900;gbkey=CDS;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460417.1;locus_tag=CCO47_RS10980;product=electron transport complex subunit E;protein_id=WP_001289628.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2249901 2250521 . - . ID=gene-CCO47_RS10985;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=CCO47_RS10985;old_locus_tag=CCO47_10985 NZ_CP075113.1 Protein Homology CDS 2249901 2250521 . - 0 ID=cds-WP_000920822.1;Parent=gene-CCO47_RS10985;Dbxref=GenBank:WP_000920822.1;Name=WP_000920822.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460418.1;locus_tag=CCO47_RS10985;product=electron transport complex subunit RsxG;protein_id=WP_000920822.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2250525 2251583 . - . ID=gene-CCO47_RS10990;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=CCO47_RS10990;old_locus_tag=CCO47_10990 NZ_CP075113.1 Protein Homology CDS 2250525 2251583 . - 0 ID=cds-WP_000231964.1;Parent=gene-CCO47_RS10990;Dbxref=GenBank:WP_000231964.1;Name=WP_000231964.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=CCO47_RS10990;product=electron transport complex subunit RsxD;protein_id=WP_000231964.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2251584 2253512 . - . ID=gene-CCO47_RS10995;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=CCO47_RS10995;old_locus_tag=CCO47_10995 NZ_CP075113.1 Protein Homology CDS 2251584 2253512 . - 0 ID=cds-WP_220572076.1;Parent=gene-CCO47_RS10995;Dbxref=GenBank:WP_220572076.1;Name=WP_220572076.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006838807.1;locus_tag=CCO47_RS10995;product=electron transport complex subunit RsxC;protein_id=WP_220572076.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2253505 2254083 . - . ID=gene-CCO47_RS11000;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=CCO47_RS11000;old_locus_tag=CCO47_11000 NZ_CP075113.1 Protein Homology CDS 2253505 2254083 . - 0 ID=cds-WP_001092597.1;Parent=gene-CCO47_RS11000;Dbxref=GenBank:WP_001092597.1;Name=WP_001092597.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460421.1;locus_tag=CCO47_RS11000;product=electron transport complex subunit RsxB;protein_id=WP_001092597.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2254083 2254664 . - . ID=gene-CCO47_RS11005;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=CCO47_RS11005;old_locus_tag=CCO47_11005 NZ_CP075113.1 Protein Homology CDS 2254083 2254664 . - 0 ID=cds-WP_000133179.1;Parent=gene-CCO47_RS11005;Dbxref=GenBank:WP_000133179.1;Name=WP_000133179.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=CCO47_RS11005;product=electron transport complex subunit RsxA;protein_id=WP_000133179.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2254741 2255181 . - . ID=gene-CCO47_RS11010;Name=CCO47_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11010;old_locus_tag=CCO47_11010 NZ_CP075113.1 Protein Homology CDS 2254741 2255181 . - 0 ID=cds-WP_000214061.1;Parent=gene-CCO47_RS11010;Dbxref=GenBank:WP_000214061.1;Name=WP_000214061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460423.1;locus_tag=CCO47_RS11010;product=DUF2569 domain-containing protein;protein_id=WP_000214061.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2255270 2255485 . - . ID=gene-CCO47_RS11015;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=CCO47_RS11015;old_locus_tag=CCO47_11015 NZ_CP075113.1 Protein Homology CDS 2255270 2255485 . - 0 ID=cds-WP_000217946.1;Parent=gene-CCO47_RS11015;Dbxref=GenBank:WP_000217946.1;Name=WP_000217946.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=CCO47_RS11015;product=transcription modulator YdgT;protein_id=WP_000217946.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2255794 2255919 . - . ID=gene-CCO47_RS11020;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=CCO47_RS11020;old_locus_tag=CCO47_11020 NZ_CP075113.1 Protein Homology CDS 2255794 2255919 . - 0 ID=cds-WP_001708800.1;Parent=gene-CCO47_RS11020;Dbxref=GenBank:WP_001708800.1;Name=WP_001708800.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=CCO47_RS11020;product=division septum protein Blr;protein_id=WP_001708800.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2256127 2257167 . + . ID=gene-CCO47_RS11025;Name=CCO47_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11025;old_locus_tag=CCO47_11025 NZ_CP075113.1 Protein Homology CDS 2256127 2257167 . + 0 ID=cds-WP_000998243.1;Parent=gene-CCO47_RS11025;Dbxref=GenBank:WP_000998243.1;Name=WP_000998243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=CCO47_RS11025;product=oxidoreductase;protein_id=WP_000998243.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2257242 2258243 . - . ID=gene-CCO47_RS11030;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=CCO47_RS11030;old_locus_tag=CCO47_11030 NZ_CP075113.1 Protein Homology CDS 2257242 2258243 . - 0 ID=cds-WP_000565572.1;Parent=gene-CCO47_RS11030;Dbxref=GenBank:WP_000565572.1;Name=WP_000565572.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460426.1;locus_tag=CCO47_RS11030;product=adenosine deaminase;protein_id=WP_000565572.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2258469 2258600 . - . ID=gene-CCO47_RS11035;Name=CCO47_RS11035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS11035;old_locus_tag=CCO47_11035;partial=true;pseudo=true;start_range=.,2258469 NZ_CP075113.1 Protein Homology CDS 2258469 2258600 . - 0 ID=cds-CCO47_RS11035;Parent=gene-CCO47_RS11035;Note=catalyzes the formation of homocysteine and pyruvate from cystathionine%3B also acts a a negative regulator for the mal regulon but interacting with the transcriptional activator MalT%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000459379.1;locus_tag=CCO47_RS11035;partial=true;product=transcriptional regulator;pseudo=true;start_range=.,2258469;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2258610 2258830 . - . ID=gene-CCO47_RS11040;Name=CCO47_RS11040;end_range=2258830,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS11040;old_locus_tag=CCO47_11040;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 2258610 2258830 . - 0 ID=cds-CCO47_RS11040;Parent=gene-CCO47_RS11040;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009401,GO:0008982;end_range=2258830,.;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310356.1;locus_tag=CCO47_RS11040;partial=true;product=glucose PTS transporter subunit EIIB;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2258949 2260457 . - . ID=gene-CCO47_RS11045;Name=CCO47_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11045;old_locus_tag=CCO47_11045 NZ_CP075113.1 Protein Homology CDS 2258949 2260457 . - 0 ID=cds-WP_000753341.1;Parent=gene-CCO47_RS11045;Dbxref=GenBank:WP_000753341.1;Name=WP_000753341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460427.1;locus_tag=CCO47_RS11045;product=YdgA family protein;protein_id=WP_000753341.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2260560 2261735 . - . ID=gene-CCO47_RS11050;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=CCO47_RS11050;old_locus_tag=CCO47_11050 NZ_CP075113.1 Protein Homology CDS 2260560 2261735 . - 0 ID=cds-WP_001170622.1;Parent=gene-CCO47_RS11050;Dbxref=GenBank:WP_001170622.1;Name=WP_001170622.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460428.1;locus_tag=CCO47_RS11050;product=mannose-6-phosphate isomerase;protein_id=WP_001170622.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2261935 2263581 . + . ID=gene-CCO47_RS11055;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=CCO47_RS11055;old_locus_tag=CCO47_11055 NZ_CP075113.1 Protein Homology CDS 2261935 2263581 . + 0 ID=cds-WP_000066611.1;Parent=gene-CCO47_RS11055;Dbxref=GenBank:WP_000066611.1;Name=WP_000066611.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=CCO47_RS11055;product=class I fumarate hydratase;protein_id=WP_000066611.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2263749 2265152 . + . ID=gene-CCO47_RS11060;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=CCO47_RS11060;old_locus_tag=CCO47_11060 NZ_CP075113.1 Protein Homology CDS 2263749 2265152 . + 0 ID=cds-WP_000259117.1;Parent=gene-CCO47_RS11060;Dbxref=GenBank:WP_000259117.1;Name=WP_000259117.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460430.1;locus_tag=CCO47_RS11060;product=class II fumarate hydratase;protein_id=WP_000259117.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2265149 2266078 . - . ID=gene-CCO47_RS11065;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=CCO47_RS11065;old_locus_tag=CCO47_11065 NZ_CP075113.1 Protein Homology CDS 2265149 2266078 . - 0 ID=cds-WP_000092497.1;Parent=gene-CCO47_RS11065;Dbxref=GenBank:WP_000092497.1;Name=WP_000092497.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=CCO47_RS11065;product=DNA replication terminus site-binding protein;protein_id=WP_000092497.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2266154 2267455 . - . ID=gene-CCO47_RS11070;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=CCO47_RS11070;old_locus_tag=CCO47_11070 NZ_CP075113.1 Protein Homology CDS 2266154 2267455 . - 0 ID=cds-WP_000732946.1;Parent=gene-CCO47_RS11070;Dbxref=GenBank:WP_000732946.1;Name=WP_000732946.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=CCO47_RS11070;product=two-component system sensor histidine kinase RstB;protein_id=WP_000732946.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2267566 2269272 . - . ID=gene-CCO47_RS11075;Name=CCO47_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11075;old_locus_tag=CCO47_11075 NZ_CP075113.1 Protein Homology CDS 2267566 2269272 . - 0 ID=cds-WP_000928671.1;Parent=gene-CCO47_RS11075;Dbxref=GenBank:WP_000928671.1;Name=WP_000928671.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460433.1;locus_tag=CCO47_RS11075;product=amidohydrolase;protein_id=WP_000928671.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2269425 2270576 . - . ID=gene-CCO47_RS11080;Name=ompS2;gbkey=Gene;gene=ompS2;gene_biotype=protein_coding;locus_tag=CCO47_RS11080;old_locus_tag=CCO47_11080 NZ_CP075113.1 Protein Homology CDS 2269425 2270576 . - 0 ID=cds-WP_000824329.1;Parent=gene-CCO47_RS11080;Dbxref=GenBank:WP_000824329.1;Name=WP_000824329.1;gbkey=CDS;gene=ompS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460434.1;locus_tag=CCO47_RS11080;product=porin OmpS2;protein_id=WP_000824329.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2271056 2271787 . - . ID=gene-CCO47_RS11085;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=CCO47_RS11085;old_locus_tag=CCO47_11085 NZ_CP075113.1 Protein Homology CDS 2271056 2271787 . - 0 ID=cds-WP_001080048.1;Parent=gene-CCO47_RS11085;Dbxref=GenBank:WP_001080048.1;Name=WP_001080048.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460435.1;locus_tag=CCO47_RS11085;product=two-component system response regulator RstA;protein_id=WP_001080048.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2271914 2272250 . + . ID=gene-CCO47_RS11090;Name=CCO47_RS11090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS11090;old_locus_tag=CCO47_11090;pseudo=true NZ_CP075113.1 Protein Homology CDS 2271914 2272250 . + 0 ID=cds-CCO47_RS11090;Parent=gene-CCO47_RS11090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460436.1;locus_tag=CCO47_RS11090;product=GlpM family protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2272312 2273695 . - . ID=gene-CCO47_RS11095;Name=CCO47_RS11095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS11095;old_locus_tag=CCO47_11095;pseudo=true NZ_CP075113.1 Protein Homology CDS 2272312 2273695 . - 0 ID=cds-CCO47_RS11095;Parent=gene-CCO47_RS11095;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460437.1;locus_tag=CCO47_RS11095;product=amino acid permease;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2273994 2274938 . - . ID=gene-CCO47_RS11100;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=CCO47_RS11100;old_locus_tag=CCO47_11100 NZ_CP075113.1 Protein Homology CDS 2273994 2274938 . - 0 ID=cds-WP_000769294.1;Parent=gene-CCO47_RS11100;Dbxref=GenBank:WP_000769294.1;Name=WP_000769294.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=CCO47_RS11100;product=DUF1471 family protein YdgH;protein_id=WP_000769294.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2275465 2276994 . + . ID=gene-CCO47_RS11105;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=CCO47_RS11105;old_locus_tag=CCO47_11105 NZ_CP075113.1 Protein Homology CDS 2275465 2276994 . + 0 ID=cds-WP_001219360.1;Parent=gene-CCO47_RS11105;Dbxref=GenBank:WP_001219360.1;Name=WP_001219360.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460439.1;locus_tag=CCO47_RS11105;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_001219360.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2277005 2278393 . + . ID=gene-CCO47_RS11110;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=CCO47_RS11110;old_locus_tag=CCO47_11110 NZ_CP075113.1 Protein Homology CDS 2277005 2278393 . + 0 ID=cds-WP_000014059.1;Parent=gene-CCO47_RS11110;Dbxref=GenBank:WP_000014059.1;Name=WP_000014059.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=CCO47_RS11110;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_000014059.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2278568 2279602 . - . ID=gene-CCO47_RS11115;Name=CCO47_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11115;old_locus_tag=CCO47_11115 NZ_CP075113.1 Protein Homology CDS 2278568 2279602 . - 0 ID=cds-WP_001118268.1;Parent=gene-CCO47_RS11115;Dbxref=GenBank:WP_001118268.1;Name=WP_001118268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460441.1;locus_tag=CCO47_RS11115;product=AI-2E family transporter;protein_id=WP_001118268.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2279738 2279908 . + . ID=gene-CCO47_RS24555;Name=CCO47_RS24555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24555 NZ_CP075113.1 Protein Homology CDS 2279738 2279908 . + 0 ID=cds-WP_001539987.1;Parent=gene-CCO47_RS24555;Dbxref=GenBank:WP_001539987.1;Name=WP_001539987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=CCO47_RS24555;product=protein YdgV;protein_id=WP_001539987.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2280020 2280382 . + . ID=gene-CCO47_RS11120;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=CCO47_RS11120;old_locus_tag=CCO47_11120 NZ_CP075113.1 Protein Homology CDS 2280020 2280382 . + 0 ID=cds-WP_000500278.1;Parent=gene-CCO47_RS11120;Dbxref=GenBank:WP_000500278.1;Name=WP_000500278.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460442.1;locus_tag=CCO47_RS11120;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_000500278.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2280369 2280698 . + . ID=gene-CCO47_RS11125;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=CCO47_RS11125;old_locus_tag=CCO47_11125 NZ_CP075113.1 Protein Homology CDS 2280369 2280698 . + 0 ID=cds-WP_001183821.1;Parent=gene-CCO47_RS11125;Dbxref=GenBank:WP_001183821.1;Name=WP_001183821.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460443.1;locus_tag=CCO47_RS11125;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_001183821.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2280738 2281559 . - . ID=gene-CCO47_RS11130;Name=CCO47_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11130;old_locus_tag=CCO47_11130 NZ_CP075113.1 Protein Homology CDS 2280738 2281559 . - 0 ID=cds-WP_000549649.1;Parent=gene-CCO47_RS11130;Dbxref=GenBank:WP_000549649.1;Name=WP_000549649.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460444.1;locus_tag=CCO47_RS11130;product=trypsin-like serine peptidase;protein_id=WP_000549649.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2281659 2281739 . - . ID=gene-CCO47_RS24560;Name=ydgU;gbkey=Gene;gene=ydgU;gene_biotype=protein_coding;locus_tag=CCO47_RS24560 NZ_CP075113.1 Protein Homology CDS 2281659 2281739 . - 0 ID=cds-WP_095470834.1;Parent=gene-CCO47_RS24560;Dbxref=GenBank:WP_095470834.1;Name=WP_095470834.1;gbkey=CDS;gene=ydgU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_276295187.1;locus_tag=CCO47_RS24560;product=small membrane protein YdgU;protein_id=WP_095470834.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2281828 2282076 . - . ID=gene-CCO47_RS11135;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=CCO47_RS11135;old_locus_tag=CCO47_11135 NZ_CP075113.1 Protein Homology CDS 2281828 2282076 . - 0 ID=cds-WP_000756313.1;Parent=gene-CCO47_RS11135;Dbxref=GenBank:WP_000756313.1;Name=WP_000756313.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310330.2;locus_tag=CCO47_RS11135;product=acid resistance repetitive basic protein Asr;protein_id=WP_000756313.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2282312 2282404 . + . ID=gene-CCO47_RS11140;Name=CCO47_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11140;old_locus_tag=CCO47_11140 NZ_CP075113.1 Protein Homology CDS 2282312 2282404 . + 0 ID=cds-WP_001068154.1;Parent=gene-CCO47_RS11140;Dbxref=GenBank:WP_001068154.1;Name=WP_001068154.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=CCO47_RS11140;product=KPN_01571 family protein;protein_id=WP_001068154.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2282471 2283724 . - . ID=gene-CCO47_RS11145;Name=CCO47_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11145;old_locus_tag=CCO47_11145 NZ_CP075113.1 Protein Homology CDS 2282471 2283724 . - 0 ID=cds-WP_000091796.1;Parent=gene-CCO47_RS11145;Dbxref=GenBank:WP_000091796.1;Name=WP_000091796.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460446.1;locus_tag=CCO47_RS11145;product=MFS transporter;protein_id=WP_000091796.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2283844 2284743 . + . ID=gene-CCO47_RS11150;Name=CCO47_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11150;old_locus_tag=CCO47_11150 NZ_CP075113.1 Protein Homology CDS 2283844 2284743 . + 0 ID=cds-WP_001019577.1;Parent=gene-CCO47_RS11150;Dbxref=GenBank:WP_001019577.1;Name=WP_001019577.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=CCO47_RS11150;product=LysR family transcriptional regulator;protein_id=WP_001019577.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2284871 2286091 . + . ID=gene-CCO47_RS11155;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=CCO47_RS11155;old_locus_tag=CCO47_11155 NZ_CP075113.1 Protein Homology CDS 2284871 2286091 . + 0 ID=cds-WP_000225087.1;Parent=gene-CCO47_RS11155;Dbxref=GenBank:WP_000225087.1;Name=WP_000225087.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=CCO47_RS11155;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_000225087.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2286217 2286912 . + . ID=gene-CCO47_RS11160;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=CCO47_RS11160;old_locus_tag=CCO47_11160 NZ_CP075113.1 Protein Homology CDS 2286217 2286912 . + 0 ID=cds-WP_000919233.1;Parent=gene-CCO47_RS11160;Dbxref=GenBank:WP_000919233.1;Name=WP_000919233.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=CCO47_RS11160;product=dethiobiotin synthase;protein_id=WP_000919233.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2286868 2288157 . - . ID=gene-CCO47_RS11165;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=CCO47_RS11165;old_locus_tag=CCO47_11165 NZ_CP075113.1 Protein Homology CDS 2286868 2288157 . - 0 ID=cds-WP_000554906.1;Parent=gene-CCO47_RS11165;Dbxref=GenBank:WP_000554906.1;Name=WP_000554906.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460450.3;locus_tag=CCO47_RS11165;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_000554906.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2288293 2289441 . - . ID=gene-CCO47_RS11170;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=CCO47_RS11170;old_locus_tag=CCO47_11170 NZ_CP075113.1 Protein Homology CDS 2288293 2289441 . - 0 ID=cds-WP_000593089.1;Parent=gene-CCO47_RS11170;Dbxref=GenBank:WP_000593089.1;Name=WP_000593089.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460451.1;locus_tag=CCO47_RS11170;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=WP_000593089.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2289441 2290088 . - . ID=gene-CCO47_RS11175;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=CCO47_RS11175;old_locus_tag=CCO47_11175 NZ_CP075113.1 Protein Homology CDS 2289441 2290088 . - 0 ID=cds-WP_000379673.1;Parent=gene-CCO47_RS11175;Dbxref=GenBank:WP_000379673.1;Name=WP_000379673.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460452.1;locus_tag=CCO47_RS11175;product=osmoprotectant ABC transporter permease OsmW;protein_id=WP_000379673.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2290098 2291000 . - . ID=gene-CCO47_RS11180;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=CCO47_RS11180;old_locus_tag=CCO47_11180 NZ_CP075113.1 Protein Homology CDS 2290098 2291000 . - 0 ID=cds-WP_001211193.1;Parent=gene-CCO47_RS11180;Dbxref=GenBank:WP_001211193.1;Name=WP_001211193.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=CCO47_RS11180;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=WP_001211193.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2291029 2291739 . - . ID=gene-CCO47_RS11185;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=CCO47_RS11185;old_locus_tag=CCO47_11185 NZ_CP075113.1 Protein Homology CDS 2291029 2291739 . - 0 ID=cds-WP_000557304.1;Parent=gene-CCO47_RS11185;Dbxref=GenBank:WP_000557304.1;Name=WP_000557304.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460454.1;locus_tag=CCO47_RS11185;product=osmoprotectant ABC transporter permease OsmY;protein_id=WP_000557304.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2292044 2292658 . - . ID=gene-CCO47_RS11190;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=CCO47_RS11190;old_locus_tag=CCO47_11190 NZ_CP075113.1 Protein Homology CDS 2292044 2292658 . - 0 ID=cds-WP_000206571.1;Parent=gene-CCO47_RS11190;Dbxref=GenBank:WP_000206571.1;Name=WP_000206571.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460455.1;locus_tag=CCO47_RS11190;product=Tat proofreading chaperone DmsD;protein_id=WP_000206571.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2292701 2293558 . - . ID=gene-CCO47_RS11195;Name=CCO47_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11195;old_locus_tag=CCO47_11195 NZ_CP075113.1 Protein Homology CDS 2292701 2293558 . - 0 ID=cds-WP_000534697.1;Parent=gene-CCO47_RS11195;Dbxref=GenBank:WP_000534697.1;Name=WP_000534697.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=CCO47_RS11195;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000534697.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2293560 2294177 . - . ID=gene-CCO47_RS11200;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=CCO47_RS11200;old_locus_tag=CCO47_11200 NZ_CP075113.1 Protein Homology CDS 2293560 2294177 . - 0 ID=cds-WP_000213062.1;Parent=gene-CCO47_RS11200;Dbxref=GenBank:WP_000213062.1;Name=WP_000213062.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=CCO47_RS11200;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213062.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2294188 2296623 . - . ID=gene-CCO47_RS11205;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=CCO47_RS11205;old_locus_tag=CCO47_11205 NZ_CP075113.1 Protein Homology CDS 2294188 2296623 . - 0 ID=cds-WP_000705291.1;Parent=gene-CCO47_RS11205;Dbxref=GenBank:WP_000705291.1;Name=WP_000705291.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=CCO47_RS11205;product=selenate/tellurate reductase subunit YnfF;protein_id=WP_000705291.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2296722 2299160 . - . ID=gene-CCO47_RS11210;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=CCO47_RS11210;old_locus_tag=CCO47_11210 NZ_CP075113.1 Protein Homology CDS 2296722 2299160 . - 0 ID=cds-WP_001117608.1;Parent=gene-CCO47_RS11210;Dbxref=GenBank:WP_001117608.1;Name=WP_001117608.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006788576.1;locus_tag=CCO47_RS11210;product=selenate/tellurate reductase subunit YnfE;protein_id=WP_001117608.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2299317 2299625 . - . ID=gene-CCO47_RS11215;Name=CCO47_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11215;old_locus_tag=CCO47_11215 NZ_CP075113.1 Protein Homology CDS 2299317 2299625 . - 0 ID=cds-WP_000975514.1;Parent=gene-CCO47_RS11215;Dbxref=GenBank:WP_000975514.1;Name=WP_000975514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=CCO47_RS11215;product=DUF1161 domain-containing protein;protein_id=WP_000975514.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2299729 2300439 . + . ID=gene-CCO47_RS11220;Name=CCO47_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11220;old_locus_tag=CCO47_11220 NZ_CP075113.1 Protein Homology CDS 2299729 2300439 . + 0 ID=cds-WP_000743123.1;Parent=gene-CCO47_RS11220;Dbxref=GenBank:WP_000743123.1;Name=WP_000743123.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465701.1;locus_tag=CCO47_RS11220;product=YnfC family lipoprotein;protein_id=WP_000743123.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2300480 2301040 . - . ID=gene-CCO47_RS11225;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=CCO47_RS11225;old_locus_tag=CCO47_11225 NZ_CP075113.1 Protein Homology CDS 2300480 2301040 . - 0 ID=cds-WP_000199997.1;Parent=gene-CCO47_RS11225;Dbxref=GenBank:WP_000199997.1;Name=WP_000199997.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460462.1;locus_tag=CCO47_RS11225;product=spermidine N1-acetyltransferase;protein_id=WP_000199997.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2301076 2301417 . - . ID=gene-CCO47_RS11230;Name=CCO47_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11230;old_locus_tag=CCO47_11230 NZ_CP075113.1 Protein Homology CDS 2301076 2301417 . - 0 ID=cds-WP_001066440.1;Parent=gene-CCO47_RS11230;Dbxref=GenBank:WP_001066440.1;Name=WP_001066440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460463.1;locus_tag=CCO47_RS11230;product=DUF1283 family protein;protein_id=WP_001066440.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2301570 2301896 . + . ID=gene-CCO47_RS11235;Name=CCO47_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11235;old_locus_tag=CCO47_11235 NZ_CP075113.1 Protein Homology CDS 2301570 2301896 . + 0 ID=cds-WP_000921391.1;Parent=gene-CCO47_RS11235;Dbxref=GenBank:WP_000921391.1;Name=WP_000921391.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460464.1;locus_tag=CCO47_RS11235;product=YnfA family protein;protein_id=WP_000921391.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2302018 2303232 . + . ID=gene-CCO47_RS11240;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=CCO47_RS11240;old_locus_tag=CCO47_11240 NZ_CP075113.1 Protein Homology CDS 2302018 2303232 . + 0 ID=cds-WP_000706269.1;Parent=gene-CCO47_RS11240;Dbxref=GenBank:WP_000706269.1;Name=WP_000706269.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=CCO47_RS11240;product=starvation-sensing protein RspA;protein_id=WP_000706269.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2303243 2304262 . + . ID=gene-CCO47_RS11245;Name=CCO47_RS11245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS11245;old_locus_tag=CCO47_11245;pseudo=true NZ_CP075113.1 Protein Homology CDS 2303243 2304262 . + 0 ID=cds-CCO47_RS11245;Parent=gene-CCO47_RS11245;Note=internal stop;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=CCO47_RS11245;product=Zn-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2304316 2305695 . + . ID=gene-CCO47_RS11250;Name=CCO47_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11250;old_locus_tag=CCO47_11250 NZ_CP075113.1 Protein Homology CDS 2304316 2305695 . + 0 ID=cds-WP_001675547.1;Parent=gene-CCO47_RS11250;Dbxref=GenBank:WP_001675547.1;Name=WP_001675547.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210164.1;locus_tag=CCO47_RS11250;product=MFS transporter;protein_id=WP_001675547.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2305839 2307305 . + . ID=gene-CCO47_RS11255;Name=CCO47_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11255;old_locus_tag=CCO47_11255 NZ_CP075113.1 Protein Homology CDS 2305839 2307305 . + 0 ID=cds-WP_001181259.1;Parent=gene-CCO47_RS11255;Dbxref=GenBank:WP_001181259.1;Name=WP_001181259.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460468.1;locus_tag=CCO47_RS11255;product=mannitol dehydrogenase family protein;protein_id=WP_001181259.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2307372 2307575 . - . ID=gene-CCO47_RS11260;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=CCO47_RS11260;old_locus_tag=CCO47_11260 NZ_CP075113.1 Protein Homology CDS 2307372 2307575 . - 0 ID=cds-WP_000989267.1;Parent=gene-CCO47_RS11260;Dbxref=GenBank:WP_000989267.1;Name=WP_000989267.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460469.1;locus_tag=CCO47_RS11260;product=putative selenium delivery protein YdfZ;protein_id=WP_000989267.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2307756 2308442 . - . ID=gene-CCO47_RS11265;Name=CCO47_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11265;old_locus_tag=CCO47_11265 NZ_CP075113.1 Protein Homology CDS 2307756 2308442 . - 0 ID=cds-WP_000215566.1;Parent=gene-CCO47_RS11265;Dbxref=GenBank:WP_000215566.1;Name=WP_000215566.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460470.1;locus_tag=CCO47_RS11265;product=GntR family transcriptional regulator;protein_id=WP_000215566.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2308572 2309318 . - . ID=gene-CCO47_RS11270;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=CCO47_RS11270;old_locus_tag=CCO47_11270 NZ_CP075113.1 Protein Homology CDS 2308572 2309318 . - 0 ID=cds-WP_000636564.1;Parent=gene-CCO47_RS11270;Dbxref=GenBank:WP_000636564.1;Name=WP_000636564.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460471.1;locus_tag=CCO47_RS11270;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_000636564.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2309457 2310422 . + . ID=gene-CCO47_RS11275;Name=CCO47_RS11275;end_range=2310422,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS11275;old_locus_tag=CCO47_11275;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 2309457 2310422 . + 0 ID=cds-CCO47_RS11275;Parent=gene-CCO47_RS11275;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006508,GO:0004222;end_range=2310422,.;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=CCO47_RS11275;partial=true;product=M3 family metallopeptidase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2310691 2310873 . + . ID=gene-CCO47_RS11280;Name=CCO47_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11280;old_locus_tag=CCO47_11280 NZ_CP075113.1 Protein Homology CDS 2310691 2310873 . + 0 ID=cds-WP_000807642.1;Parent=gene-CCO47_RS11280;Dbxref=GenBank:WP_000807642.1;Name=WP_000807642.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460473.1;locus_tag=CCO47_RS11280;product=con-10 family general stress protein;protein_id=WP_000807642.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2310993 2311520 . - . ID=gene-CCO47_RS11285;Name=CCO47_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11285;old_locus_tag=CCO47_11285 NZ_CP075113.1 Protein Homology CDS 2310993 2311520 . - 0 ID=cds-WP_001235355.1;Parent=gene-CCO47_RS11285;Dbxref=GenBank:WP_001235355.1;Name=WP_001235355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460474.1;locus_tag=CCO47_RS11285;product=2-oxo-tetronate isomerase;protein_id=WP_001235355.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2311948 2312340 . + . ID=gene-CCO47_RS11290;Name=CCO47_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11290;old_locus_tag=CCO47_11290 NZ_CP075113.1 Protein Homology CDS 2311948 2312340 . + 0 ID=cds-WP_000776351.1;Parent=gene-CCO47_RS11290;Dbxref=GenBank:WP_000776351.1;Name=WP_000776351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=CCO47_RS11290;product=YdeI family stress tolerance OB fold protein;protein_id=WP_000776351.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2312688 2312783 . - . ID=gene-CCO47_RS11295;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=CCO47_RS11295;old_locus_tag=CCO47_11295 NZ_CP075113.1 Protein Homology CDS 2312688 2312783 . - 0 ID=cds-WP_000901531.1;Parent=gene-CCO47_RS11295;Dbxref=GenBank:WP_000901531.1;Name=WP_000901531.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=CCO47_RS11295;product=protein MgtS;protein_id=WP_000901531.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2313031 2314217 . - . ID=gene-CCO47_RS11300;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=pseudogene;locus_tag=CCO47_RS11300;old_locus_tag=CCO47_11300;pseudo=true NZ_CP075113.1 Protein Homology CDS 2313031 2314217 . - 0 ID=cds-CCO47_RS11300;Parent=gene-CCO47_RS11300;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460476.1;locus_tag=CCO47_RS11300;product=efflux MFS transporter YdeE;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2314445 2315347 . + . ID=gene-CCO47_RS11305;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=CCO47_RS11305;old_locus_tag=CCO47_11305 NZ_CP075113.1 Protein Homology CDS 2314445 2315347 . + 0 ID=cds-WP_000987750.1;Parent=gene-CCO47_RS11305;Dbxref=GenBank:WP_000987750.1;Name=WP_000987750.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460477.1;locus_tag=CCO47_RS11305;product=O-acetylserine/cysteine exporter;protein_id=WP_000987750.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2315466 2315681 . - . ID=gene-CCO47_RS11310;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=CCO47_RS11310;old_locus_tag=CCO47_11310 NZ_CP075113.1 Protein Homology CDS 2315466 2315681 . - 0 ID=cds-WP_000783049.1;Parent=gene-CCO47_RS11310;Dbxref=GenBank:WP_000783049.1;Name=WP_000783049.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460478.1;locus_tag=CCO47_RS11310;product=multiple antibiotic resistance protein MarB;protein_id=WP_000783049.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2315710 2316093 . - . ID=gene-CCO47_RS11315;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=CCO47_RS11315;old_locus_tag=CCO47_11315 NZ_CP075113.1 Protein Homology CDS 2315710 2316093 . - 0 ID=cds-WP_000091194.1;Parent=gene-CCO47_RS11315;Dbxref=GenBank:WP_000091194.1;Name=WP_000091194.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091194.1;locus_tag=CCO47_RS11315;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091194.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2316113 2316547 . - . ID=gene-CCO47_RS11320;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=CCO47_RS11320;old_locus_tag=CCO47_11320 NZ_CP075113.1 Protein Homology CDS 2316113 2316547 . - 0 ID=cds-WP_000843434.1;Parent=gene-CCO47_RS11320;Dbxref=GenBank:WP_000843434.1;Name=WP_000843434.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=CCO47_RS11320;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_000843434.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2316806 2317471 . + . ID=gene-CCO47_RS11325;Name=CCO47_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11325;old_locus_tag=CCO47_11325 NZ_CP075113.1 Protein Homology CDS 2316806 2317471 . + 0 ID=cds-WP_000968967.1;Parent=gene-CCO47_RS11325;Dbxref=GenBank:WP_000968967.1;Name=WP_000968967.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460481.1;locus_tag=CCO47_RS11325;product=MarC family NAAT transporter;protein_id=WP_000968967.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2317518 2318708 . - . ID=gene-CCO47_RS11330;Name=CCO47_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11330;old_locus_tag=CCO47_11330 NZ_CP075113.1 Protein Homology CDS 2317518 2318708 . - 0 ID=cds-WP_000154617.1;Parent=gene-CCO47_RS11330;Dbxref=GenBank:WP_000154617.1;Name=WP_000154617.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460482.1;locus_tag=CCO47_RS11330;product=sugar transporter;protein_id=WP_000154617.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2318824 2319696 . - . ID=gene-CCO47_RS11335;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=CCO47_RS11335;old_locus_tag=CCO47_11335 NZ_CP075113.1 Protein Homology CDS 2318824 2319696 . - 0 ID=cds-WP_000366539.1;Parent=gene-CCO47_RS11335;Dbxref=GenBank:WP_000366539.1;Name=WP_000366539.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460483.1;locus_tag=CCO47_RS11335;product=putrescine utilization regulator PtrR;protein_id=WP_000366539.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2319799 2321187 . + . ID=gene-CCO47_RS11340;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=CCO47_RS11340;old_locus_tag=CCO47_11340 NZ_CP075113.1 Protein Homology CDS 2319799 2321187 . + 0 ID=cds-WP_000178407.1;Parent=gene-CCO47_RS11340;Dbxref=GenBank:WP_000178407.1;Name=WP_000178407.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=CCO47_RS11340;product=succinate-semialdehyde dehydrogenase;protein_id=WP_000178407.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2321260 2322186 . + . ID=gene-CCO47_RS11345;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=CCO47_RS11345;old_locus_tag=CCO47_11345 NZ_CP075113.1 Protein Homology CDS 2321260 2322186 . + 0 ID=cds-WP_000312239.1;Parent=gene-CCO47_RS11345;Dbxref=GenBank:WP_000312239.1;Name=WP_000312239.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=CCO47_RS11345;product=glutaminase B;protein_id=WP_000312239.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2322186 2322545 . + . ID=gene-CCO47_RS11350;Name=CCO47_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11350;old_locus_tag=CCO47_11350 NZ_CP075113.1 Protein Homology CDS 2322186 2322545 . + 0 ID=cds-WP_000992449.1;Parent=gene-CCO47_RS11350;Dbxref=GenBank:WP_000992449.1;Name=WP_000992449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460486.1;locus_tag=CCO47_RS11350;product=DUF4186 domain-containing protein;protein_id=WP_000992449.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2322799 2323713 . + . ID=gene-CCO47_RS11355;Name=CCO47_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11355;old_locus_tag=CCO47_11355 NZ_CP075113.1 Protein Homology CDS 2322799 2323713 . + 0 ID=cds-WP_001675544.1;Parent=gene-CCO47_RS11355;Dbxref=GenBank:WP_001675544.1;Name=WP_001675544.1;Ontology_term=GO:0005254;gbkey=CDS;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=CCO47_RS11355;product=bestrophin family protein;protein_id=WP_001675544.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2323769 2324311 . - . ID=gene-CCO47_RS11360;Name=CCO47_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11360;old_locus_tag=CCO47_11360 NZ_CP075113.1 Protein Homology CDS 2323769 2324311 . - 0 ID=cds-WP_000513126.1;Parent=gene-CCO47_RS11360;Dbxref=GenBank:WP_000513126.1;Name=WP_000513126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460488.1;locus_tag=CCO47_RS11360;product=YybH family protein;protein_id=WP_000513126.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2325028 2326146 . + . ID=gene-CCO47_RS11365;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=CCO47_RS11365;old_locus_tag=CCO47_11365 NZ_CP075113.1 Protein Homology CDS 2325028 2326146 . + 0 ID=cds-WP_000758335.1;Parent=gene-CCO47_RS11365;Dbxref=GenBank:WP_000758335.1;Name=WP_000758335.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=CCO47_RS11365;product=porin OmpC;protein_id=WP_000758335.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2326287 2326628 . - . ID=gene-CCO47_RS11370;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=CCO47_RS11370;old_locus_tag=CCO47_11370 NZ_CP075113.1 Protein Homology CDS 2326287 2326628 . - 0 ID=cds-WP_000544772.1;Parent=gene-CCO47_RS11370;Dbxref=GenBank:WP_000544772.1;Name=WP_000544772.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460491.1;locus_tag=CCO47_RS11370;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544772.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2326641 2327528 . - . ID=gene-CCO47_RS11375;Name=CCO47_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11375;old_locus_tag=CCO47_11375 NZ_CP075113.1 Protein Homology CDS 2326641 2327528 . - 0 ID=cds-WP_001189389.1;Parent=gene-CCO47_RS11375;Dbxref=GenBank:WP_001189389.1;Name=WP_001189389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460492.1;locus_tag=CCO47_RS11375;product=ATP/GTP-binding protein;protein_id=WP_001189389.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2327516 2328577 . - . ID=gene-CCO47_RS11380;Name=CCO47_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11380;old_locus_tag=CCO47_11380 NZ_CP075113.1 Protein Homology CDS 2327516 2328577 . - 0 ID=cds-WP_001109927.1;Parent=gene-CCO47_RS11380;Dbxref=GenBank:WP_001109927.1;Name=WP_001109927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460493.1;locus_tag=CCO47_RS11380;product=hydrogenase expression/formation C-terminal domain-containing protein;protein_id=WP_001109927.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2328595 2329005 . - . ID=gene-CCO47_RS11385;Name=CCO47_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11385;old_locus_tag=CCO47_11385 NZ_CP075113.1 Protein Homology CDS 2328595 2329005 . - 0 ID=cds-WP_000155985.1;Parent=gene-CCO47_RS11385;Dbxref=GenBank:WP_000155985.1;Name=WP_000155985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460494.1;locus_tag=CCO47_RS11385;product=thioredoxin domain-containing protein;protein_id=WP_000155985.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2329002 2329301 . - . ID=gene-CCO47_RS11390;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=CCO47_RS11390;old_locus_tag=CCO47_11390 NZ_CP075113.1 Protein Homology CDS 2329002 2329301 . - 0 ID=cds-WP_000334904.1;Parent=gene-CCO47_RS11390;Dbxref=GenBank:WP_000334904.1;Name=WP_000334904.1;Ontology_term=GO:0065003,GO:0016530,GO:0051082;gbkey=CDS;gene=hypC;go_function=metallochaperone activity|0016530||IEA,unfolded protein binding|0051082||IEA;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460495.1;locus_tag=CCO47_RS11390;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_000334904.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2329301 2329909 . - . ID=gene-CCO47_RS11395;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=CCO47_RS11395;old_locus_tag=CCO47_11395 NZ_CP075113.1 Protein Homology CDS 2329301 2329909 . - 0 ID=cds-WP_000852664.1;Parent=gene-CCO47_RS11395;Dbxref=GenBank:WP_000852664.1;Name=WP_000852664.1;Ontology_term=GO:0051604,GO:0004190,GO:0046872,GO:0009375;gbkey=CDS;gene=hybD;go_component=ferredoxin hydrogenase complex|0009375||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA,metal ion binding|0046872||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460496.1;locus_tag=CCO47_RS11395;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_000852664.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2329915 2330658 . - . ID=gene-CCO47_RS11400;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=CCO47_RS11400;old_locus_tag=CCO47_11400 NZ_CP075113.1 Protein Homology CDS 2329915 2330658 . - 0 ID=cds-WP_000924456.1;Parent=gene-CCO47_RS11400;Dbxref=GenBank:WP_000924456.1;Name=WP_000924456.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=CCO47_RS11400;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=WP_000924456.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2330609 2332411 . - . ID=gene-CCO47_RS11405;Name=CCO47_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11405;old_locus_tag=CCO47_11405 NZ_CP075113.1 Protein Homology CDS 2330609 2332411 . - 0 ID=cds-WP_000331200.1;Parent=gene-CCO47_RS11405;Dbxref=GenBank:WP_000331200.1;Name=WP_000331200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=CCO47_RS11405;product=nickel-dependent hydrogenase large subunit;protein_id=WP_000331200.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2332414 2333517 . - . ID=gene-CCO47_RS11410;Name=CCO47_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11410;old_locus_tag=CCO47_11410 NZ_CP075113.1 Protein Homology CDS 2332414 2333517 . - 0 ID=cds-WP_001194448.1;Parent=gene-CCO47_RS11410;Dbxref=GenBank:WP_001194448.1;Name=WP_001194448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460499.1;locus_tag=CCO47_RS11410;product=hydrogenase small subunit;protein_id=WP_001194448.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2333945 2335036 . + . ID=gene-CCO47_RS11415;Name=CCO47_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11415;old_locus_tag=CCO47_11415 NZ_CP075113.1 Protein Homology CDS 2333945 2335036 . + 0 ID=cds-WP_000976494.1;Parent=gene-CCO47_RS11415;Dbxref=GenBank:WP_000976494.1;Name=WP_000976494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460500.1;locus_tag=CCO47_RS11415;product=choloylglycine hydrolase family protein;protein_id=WP_000976494.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2335082 2335873 . + . ID=gene-CCO47_RS11420;Name=CCO47_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11420;old_locus_tag=CCO47_11420 NZ_CP075113.1 Protein Homology CDS 2335082 2335873 . + 0 ID=cds-WP_000388417.1;Parent=gene-CCO47_RS11420;Dbxref=GenBank:WP_000388417.1;Name=WP_000388417.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460501.1;locus_tag=CCO47_RS11420;product=FadR/GntR family transcriptional regulator;protein_id=WP_000388417.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2335932 2336957 . - . ID=gene-CCO47_RS11425;Name=CCO47_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11425;old_locus_tag=CCO47_11425 NZ_CP075113.1 Protein Homology CDS 2335932 2336957 . - 0 ID=cds-WP_000864924.1;Parent=gene-CCO47_RS11425;Dbxref=GenBank:WP_000864924.1;Name=WP_000864924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460502.1;locus_tag=CCO47_RS11425;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_000864924.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2336932 2338218 . - . ID=gene-CCO47_RS11430;Name=CCO47_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11430;old_locus_tag=CCO47_11430 NZ_CP075113.1 Protein Homology CDS 2336932 2338218 . - 0 ID=cds-WP_000824240.1;Parent=gene-CCO47_RS11430;Dbxref=GenBank:WP_000824240.1;Name=WP_000824240.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460503.1;locus_tag=CCO47_RS11430;product=MFS transporter;protein_id=WP_000824240.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2338395 2339951 . - . ID=gene-CCO47_RS11435;Name=CCO47_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11435;old_locus_tag=CCO47_11435 NZ_CP075113.1 Protein Homology CDS 2338395 2339951 . - 0 ID=cds-WP_094912320.1;Parent=gene-CCO47_RS11435;Dbxref=GenBank:WP_094912320.1;Name=WP_094912320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460504.1;locus_tag=CCO47_RS11435;product=PhoPQ-activated pathogenicity-related family protein;protein_id=WP_094912320.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2340021 2340368 . - . ID=gene-CCO47_RS11440;Name=CCO47_RS11440;end_range=2340368,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS11440;old_locus_tag=CCO47_11440;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 2340021 2340368 . - 0 ID=cds-CCO47_RS11440;Parent=gene-CCO47_RS11440;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2340368,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460505.1;locus_tag=CCO47_RS11440;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2340365 2340472 . - . ID=gene-CCO47_RS11445;Name=CCO47_RS11445;end_range=2340472,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS11445;old_locus_tag=CCO47_11445;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 2340365 2340472 . - 0 ID=cds-CCO47_RS11445;Parent=gene-CCO47_RS11445;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0017148,GO:0004521,GO:0110001;end_range=2340472,.;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460510.1;locus_tag=CCO47_RS11445;partial=true;product=type II toxin-antitoxin system RelE family toxin;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2340473 2340673 . + . ID=gene-CCO47_RS11450;Name=CCO47_RS11450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS11450;old_locus_tag=CCO47_11450;partial=true;pseudo=true;start_range=.,2340473 NZ_CP075113.1 Protein Homology CDS 2340473 2340673 . + 0 ID=cds-CCO47_RS11450;Parent=gene-CCO47_RS11450;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253166.1;locus_tag=CCO47_RS11450;partial=true;product=DUF1493 family protein;pseudo=true;start_range=.,2340473;transl_table=11 NZ_CP075113.1 RefSeq gene 2341055 2341177 . + . ID=gene-CCO47_RS24165;Name=CCO47_RS24165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24165 NZ_CP075113.1 GeneMarkS-2+ CDS 2341055 2341177 . + 0 ID=cds-WP_254888761.1;Parent=gene-CCO47_RS24165;Dbxref=GenBank:WP_254888761.1;Name=WP_254888761.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO47_RS24165;product=hypothetical protein;protein_id=WP_254888761.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2341474 2342481 . + . ID=gene-CCO47_RS11455;Name=CCO47_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11455;old_locus_tag=CCO47_11455 NZ_CP075113.1 Protein Homology CDS 2341474 2342481 . + 0 ID=cds-WP_000201082.1;Parent=gene-CCO47_RS11455;Dbxref=GenBank:WP_000201082.1;Name=WP_000201082.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460514.1;locus_tag=CCO47_RS11455;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000201082.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2342625 2344076 . + . ID=gene-CCO47_RS11460;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=CCO47_RS11460;old_locus_tag=CCO47_11460 NZ_CP075113.1 Protein Homology CDS 2342625 2344076 . + 0 ID=cds-WP_001276624.1;Parent=gene-CCO47_RS11460;Dbxref=GenBank:WP_001276624.1;Name=WP_001276624.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=CCO47_RS11460;product=Na+/H+ antiporter NhaC;protein_id=WP_001276624.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2344089 2345291 . + . ID=gene-CCO47_RS11465;Name=CCO47_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11465;old_locus_tag=CCO47_11465 NZ_CP075113.1 Protein Homology CDS 2344089 2345291 . + 0 ID=cds-WP_000347156.1;Parent=gene-CCO47_RS11465;Dbxref=GenBank:WP_000347156.1;Name=WP_000347156.1;Ontology_term=GO:0071265,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460516.1;locus_tag=CCO47_RS11465;product=MalY/PatB family protein;protein_id=WP_000347156.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2345404 2347479 . - . ID=gene-CCO47_RS11470;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=CCO47_RS11470;old_locus_tag=CCO47_11470 NZ_CP075113.1 Protein Homology CDS 2345404 2347479 . - 0 ID=cds-WP_000210596.1;Parent=gene-CCO47_RS11470;Dbxref=GenBank:WP_000210596.1;Name=WP_000210596.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=CCO47_RS11470;product=glycogen debranching protein GlgX;protein_id=WP_000210596.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2347536 2350064 . - . ID=gene-CCO47_RS11475;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=CCO47_RS11475;old_locus_tag=CCO47_11475 NZ_CP075113.1 Protein Homology CDS 2347536 2350064 . - 0 ID=cds-WP_000613139.1;Parent=gene-CCO47_RS11475;Dbxref=GenBank:WP_000613139.1;Name=WP_000613139.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=CCO47_RS11475;product=malto-oligosyltrehalose synthase;protein_id=WP_000613139.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2350061 2351845 . - . ID=gene-CCO47_RS11480;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=CCO47_RS11480;old_locus_tag=CCO47_11480 NZ_CP075113.1 Protein Homology CDS 2350061 2351845 . - 0 ID=cds-WP_000095548.1;Parent=gene-CCO47_RS11480;Dbxref=GenBank:WP_000095548.1;Name=WP_000095548.1;Ontology_term=GO:0005992,GO:0033942;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460519.1;locus_tag=CCO47_RS11480;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_000095548.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2351974 2352759 . - . ID=gene-CCO47_RS11485;Name=CCO47_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11485;old_locus_tag=CCO47_11485 NZ_CP075113.1 Protein Homology CDS 2351974 2352759 . - 0 ID=cds-WP_000698598.1;Parent=gene-CCO47_RS11485;Dbxref=GenBank:WP_000698598.1;Name=WP_000698598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460520.1;locus_tag=CCO47_RS11485;product=OBAP family protein;protein_id=WP_000698598.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2352902 2353231 . - . ID=gene-CCO47_RS11490;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=CCO47_RS11490;old_locus_tag=CCO47_11490 NZ_CP075113.1 Protein Homology CDS 2352902 2353231 . - 0 ID=cds-WP_001032161.1;Parent=gene-CCO47_RS11490;Dbxref=GenBank:WP_001032161.1;Name=WP_001032161.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460521.1;locus_tag=CCO47_RS11490;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001032161.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2353581 2354012 . - . ID=gene-CCO47_RS11495;Name=CCO47_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11495;old_locus_tag=CCO47_11495 NZ_CP075113.1 Protein Homology CDS 2353581 2354012 . - 0 ID=cds-WP_000152297.1;Parent=gene-CCO47_RS11495;Dbxref=GenBank:WP_000152297.1;Name=WP_000152297.1;Ontology_term=GO:0006972,GO:0006979,GO:0033194,GO:0004601,GO:0051920,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=peroxidase activity|0004601||IEA,peroxiredoxin activity|0051920||IEA;go_process=hyperosmotic response|0006972||IEA,response to oxidative stress|0006979||IEA,response to hydroperoxide|0033194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460522.1;locus_tag=CCO47_RS11495;product=OsmC family protein;protein_id=WP_000152297.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2354525 2354740 . + . ID=gene-CCO47_RS11500;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=CCO47_RS11500;old_locus_tag=CCO47_11500 NZ_CP075113.1 Protein Homology CDS 2354525 2354740 . + 0 ID=cds-WP_000495700.1;Parent=gene-CCO47_RS11500;Dbxref=GenBank:WP_000495700.1;Name=WP_000495700.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460523.1;locus_tag=CCO47_RS11500;product=biofilm-dependent modulation protein;protein_id=WP_000495700.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2354835 2354978 . + . ID=gene-CCO47_RS11505;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=CCO47_RS11505;old_locus_tag=CCO47_11505 NZ_CP075113.1 Protein Homology CDS 2354835 2354978 . + 0 ID=cds-WP_000841559.1;Parent=gene-CCO47_RS11505;Dbxref=GenBank:WP_000841559.1;Name=WP_000841559.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460524.1;locus_tag=CCO47_RS11505;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841559.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2355155 2356852 . + . ID=gene-CCO47_RS11510;Name=CCO47_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11510;old_locus_tag=CCO47_11510 NZ_CP075113.1 Protein Homology CDS 2355155 2356852 . + 0 ID=cds-WP_000447951.1;Parent=gene-CCO47_RS11510;Dbxref=GenBank:WP_000447951.1;Name=WP_000447951.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=CCO47_RS11510;product=NAD-dependent malic enzyme;protein_id=WP_000447951.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2357134 2358144 . + . ID=gene-CCO47_RS11515;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=CCO47_RS11515;old_locus_tag=CCO47_11515 NZ_CP075113.1 Protein Homology CDS 2357134 2358144 . + 0 ID=cds-WP_000642447.1;Parent=gene-CCO47_RS11515;Dbxref=GenBank:WP_000642447.1;Name=WP_000642447.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460526.1;locus_tag=CCO47_RS11515;product=alcohol dehydrogenase AdhP;protein_id=WP_000642447.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2358235 2358891 . - . ID=gene-CCO47_RS11520;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=CCO47_RS11520;old_locus_tag=CCO47_11520 NZ_CP075113.1 Protein Homology CDS 2358235 2358891 . - 0 ID=cds-WP_000045657.1;Parent=gene-CCO47_RS11520;Dbxref=GenBank:WP_000045657.1;Name=WP_000045657.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=CCO47_RS11520;product=formate dehydrogenase-N subunit gamma;protein_id=WP_000045657.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2358884 2359768 . - . ID=gene-CCO47_RS11525;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=CCO47_RS11525;old_locus_tag=CCO47_11525 NZ_CP075113.1 Protein Homology CDS 2358884 2359768 . - 0 ID=cds-WP_000061599.1;Parent=gene-CCO47_RS11525;Dbxref=GenBank:WP_000061599.1;Name=WP_000061599.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=CCO47_RS11525;product=formate dehydrogenase subunit beta;protein_id=WP_000061599.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2359782 2362829 . - . ID=gene-CCO47_RS11530;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=CCO47_RS11530;old_locus_tag=CCO47_11530 NZ_CP075113.1 Protein Homology CDS 2359782 2362829 . - 0 ID=cds-WP_001574320.1;Parent=gene-CCO47_RS11530;Dbxref=GenBank:WP_001574320.1;Name=WP_001574320.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=CCO47_RS11530;product=formate dehydrogenase-N subunit alpha;protein_id=WP_001574320.1;transl_except=(pos:complement(2362242..2362244)%2Caa:Sec);transl_table=11 NZ_CP075113.1 RefSeq gene 2363107 2363988 . + . ID=gene-CCO47_RS11535;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=CCO47_RS11535;old_locus_tag=CCO47_11535 NZ_CP075113.1 Protein Homology CDS 2363107 2363988 . + 0 ID=cds-WP_000203789.1;Parent=gene-CCO47_RS11535;Dbxref=GenBank:WP_000203789.1;Name=WP_000203789.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203799.1;locus_tag=CCO47_RS11535;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WP_000203789.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2364511 2365599 . + . ID=gene-CCO47_RS11540;Name=ompD;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=CCO47_RS11540;old_locus_tag=CCO47_11540 NZ_CP075113.1 Protein Homology CDS 2364511 2365599 . + 0 ID=cds-WP_000769037.1;Parent=gene-CCO47_RS11540;Dbxref=GenBank:WP_000769037.1;Name=WP_000769037.1;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=CCO47_RS11540;product=porin OmpD;protein_id=WP_000769037.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2365743 2366123 . + . ID=gene-CCO47_RS11545;Name=CCO47_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11545;old_locus_tag=CCO47_11545 NZ_CP075113.1 Protein Homology CDS 2365743 2366123 . + 0 ID=cds-WP_014343841.1;Parent=gene-CCO47_RS11545;Dbxref=GenBank:WP_014343841.1;Name=WP_014343841.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=CCO47_RS11545;product=GFA family protein;protein_id=WP_014343841.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2366148 2367635 . - . ID=gene-CCO47_RS11550;Name=smvA;gbkey=Gene;gene=smvA;gene_biotype=protein_coding;locus_tag=CCO47_RS11550;old_locus_tag=CCO47_11550 NZ_CP075113.1 Protein Homology CDS 2366148 2367635 . - 0 ID=cds-WP_000489736.1;Parent=gene-CCO47_RS11550;Dbxref=GenBank:WP_000489736.1;Name=WP_000489736.1;gbkey=CDS;gene=smvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460533.1;locus_tag=CCO47_RS11550;product=methyl viologen efflux MFS transporter SmvA;protein_id=WP_000489736.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2367753 2368331 . + . ID=gene-CCO47_RS11555;Name=CCO47_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11555;old_locus_tag=CCO47_11555 NZ_CP075113.1 Protein Homology CDS 2367753 2368331 . + 0 ID=cds-WP_000121051.1;Parent=gene-CCO47_RS11555;Dbxref=GenBank:WP_000121051.1;Name=WP_000121051.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460534.1;locus_tag=CCO47_RS11555;product=TetR family transcriptional regulator;protein_id=WP_000121051.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2368546 2369934 . + . ID=gene-CCO47_RS11560;Name=CCO47_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11560;old_locus_tag=CCO47_11560 NZ_CP075113.1 Protein Homology CDS 2368546 2369934 . + 0 ID=cds-WP_000198255.1;Parent=gene-CCO47_RS11560;Dbxref=GenBank:WP_000198255.1;Name=WP_000198255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=CCO47_RS11560;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_000198255.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2370026 2373766 . + . ID=gene-CCO47_RS11565;Name=CCO47_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11565;old_locus_tag=CCO47_11565 NZ_CP075113.1 Protein Homology CDS 2370026 2373766 . + 0 ID=cds-WP_000040402.1;Parent=gene-CCO47_RS11565;Dbxref=GenBank:WP_000040402.1;Name=WP_000040402.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=CCO47_RS11565;product=nitrate reductase subunit alpha;protein_id=WP_000040402.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2373763 2375307 . + . ID=gene-CCO47_RS11570;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=CCO47_RS11570;old_locus_tag=CCO47_11570 NZ_CP075113.1 Protein Homology CDS 2373763 2375307 . + 0 ID=cds-WP_000702595.1;Parent=gene-CCO47_RS11570;Dbxref=GenBank:WP_000702595.1;Name=WP_000702595.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=CCO47_RS11570;product=nitrate reductase subunit beta;protein_id=WP_000702595.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2375307 2376002 . + . ID=gene-CCO47_RS11575;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=CCO47_RS11575;old_locus_tag=CCO47_11575 NZ_CP075113.1 Protein Homology CDS 2375307 2376002 . + 0 ID=cds-WP_001166287.1;Parent=gene-CCO47_RS11575;Dbxref=GenBank:WP_001166287.1;Name=WP_001166287.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460538.1;locus_tag=CCO47_RS11575;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_001166287.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2375999 2376679 . + . ID=gene-CCO47_RS11580;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=CCO47_RS11580;old_locus_tag=CCO47_11580 NZ_CP075113.1 Protein Homology CDS 2375999 2376679 . + 0 ID=cds-WP_000617106.1;Parent=gene-CCO47_RS11580;Dbxref=GenBank:WP_000617106.1;Name=WP_000617106.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=CCO47_RS11580;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617106.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2376785 2377678 . + . ID=gene-CCO47_RS11585;Name=CCO47_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11585;old_locus_tag=CCO47_11585 NZ_CP075113.1 Protein Homology CDS 2376785 2377678 . + 0 ID=cds-WP_000804300.1;Parent=gene-CCO47_RS11585;Dbxref=GenBank:WP_000804300.1;Name=WP_000804300.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460540.1;locus_tag=CCO47_RS11585;product=PhzF family isomerase;protein_id=WP_000804300.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2377714 2378559 . - . ID=gene-CCO47_RS11590;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=CCO47_RS11590;old_locus_tag=CCO47_11590 NZ_CP075113.1 Protein Homology CDS 2377714 2378559 . - 0 ID=cds-WP_000200329.1;Parent=gene-CCO47_RS11590;Dbxref=GenBank:WP_000200329.1;Name=WP_000200329.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=CCO47_RS11590;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_000200329.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2378842 2379474 . - . ID=gene-CCO47_RS11595;Name=steA;gbkey=Gene;gene=steA;gene_biotype=protein_coding;locus_tag=CCO47_RS11595;old_locus_tag=CCO47_11595 NZ_CP075113.1 Protein Homology CDS 2378842 2379474 . - 0 ID=cds-WP_001147136.1;Parent=gene-CCO47_RS11595;Dbxref=GenBank:WP_001147136.1;Name=WP_001147136.1;gbkey=CDS;gene=steA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460542.1;locus_tag=CCO47_RS11595;product=type III secretion system effector SteA;protein_id=WP_001147136.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2379987 2381480 . + . ID=gene-CCO47_RS11600;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=CCO47_RS11600;old_locus_tag=CCO47_11600 NZ_CP075113.1 Protein Homology CDS 2379987 2381480 . + 0 ID=cds-WP_000857112.1;Parent=gene-CCO47_RS11600;Dbxref=GenBank:WP_000857112.1;Name=WP_000857112.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460543.1;locus_tag=CCO47_RS11600;product=L-asparagine permease;protein_id=WP_000857112.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2381557 2381778 . - . ID=gene-CCO47_RS11605;Name=CCO47_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11605;old_locus_tag=CCO47_11605 NZ_CP075113.1 Protein Homology CDS 2381557 2381778 . - 0 ID=cds-WP_000732364.1;Parent=gene-CCO47_RS11605;Dbxref=GenBank:WP_000732364.1;Name=WP_000732364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460544.1;locus_tag=CCO47_RS11605;product=YgdI/YgdR family lipoprotein;protein_id=WP_000732364.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2381923 2382984 . - . ID=gene-CCO47_RS11610;Name=yncE;gbkey=Gene;gene=yncE;gene_biotype=protein_coding;locus_tag=CCO47_RS11610;old_locus_tag=CCO47_11610 NZ_CP075113.1 Protein Homology CDS 2381923 2382984 . - 0 ID=cds-WP_000550640.1;Parent=gene-CCO47_RS11610;Dbxref=GenBank:WP_000550640.1;Name=WP_000550640.1;gbkey=CDS;gene=yncE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460545.1;locus_tag=CCO47_RS11610;product=7-bladed beta-propeller protein YncE;protein_id=WP_000550640.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2383248 2385368 . + . ID=gene-CCO47_RS11615;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=CCO47_RS11615;old_locus_tag=CCO47_11615 NZ_CP075113.1 Protein Homology CDS 2383248 2385368 . + 0 ID=cds-WP_000692059.1;Parent=gene-CCO47_RS11615;Dbxref=GenBank:WP_000692059.1;Name=WP_000692059.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=CCO47_RS11615;product=TonB-dependent receptor PqqU;protein_id=WP_000692059.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2385424 2386089 . - . ID=gene-CCO47_RS11620;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=CCO47_RS11620;old_locus_tag=CCO47_11620 NZ_CP075113.1 Protein Homology CDS 2385424 2386089 . - 0 ID=cds-WP_001119592.1;Parent=gene-CCO47_RS11620;Dbxref=GenBank:WP_001119592.1;Name=WP_001119592.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460547.1;locus_tag=CCO47_RS11620;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WP_001119592.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2386423 2387460 . - . ID=gene-CCO47_RS11625;Name=CCO47_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11625;old_locus_tag=CCO47_11625 NZ_CP075113.1 Protein Homology CDS 2386423 2387460 . - 0 ID=cds-WP_001517827.1;Parent=gene-CCO47_RS11625;Dbxref=GenBank:WP_001517827.1;Name=WP_001517827.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517827.1;locus_tag=CCO47_RS11625;product=NADPH-dependent curcumin/dihydrocurcumin reductase;protein_id=WP_001517827.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2387672 2388187 . + . ID=gene-CCO47_RS11630;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=CCO47_RS11630;old_locus_tag=CCO47_11630 NZ_CP075113.1 Protein Homology CDS 2387672 2388187 . + 0 ID=cds-WP_000155373.1;Parent=gene-CCO47_RS11630;Dbxref=GenBank:WP_000155373.1;Name=WP_000155373.1;Note=Keep exception level- 87%25 similar to E. coli K12 P76112%2C different gene symbol;gbkey=CDS;gene=mddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460549.1;locus_tag=CCO47_RS11630;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=WP_000155373.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2388187 2388636 . + . ID=gene-CCO47_RS11635;Name=CCO47_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11635;old_locus_tag=CCO47_11635 NZ_CP075113.1 Protein Homology CDS 2388187 2388636 . + 0 ID=cds-WP_001076565.1;Parent=gene-CCO47_RS11635;Dbxref=GenBank:WP_001076565.1;Name=WP_001076565.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460550.1;locus_tag=CCO47_RS11635;product=DMT family transporter;protein_id=WP_001076565.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2388641 2388874 . - . ID=gene-CCO47_RS11640;Name=CCO47_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11640;old_locus_tag=CCO47_11640 NZ_CP075113.1 Protein Homology CDS 2388641 2388874 . - 0 ID=cds-WP_000018720.1;Parent=gene-CCO47_RS11640;Dbxref=GenBank:WP_000018720.1;Name=WP_000018720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460551.1;locus_tag=CCO47_RS11640;product=YdcY family protein;protein_id=WP_000018720.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2389098 2390426 . + . ID=gene-CCO47_RS11645;Name=srfA;gbkey=Gene;gene=srfA;gene_biotype=protein_coding;locus_tag=CCO47_RS11645;old_locus_tag=CCO47_11645 NZ_CP075113.1 Protein Homology CDS 2389098 2390426 . + 0 ID=cds-WP_001129966.1;Parent=gene-CCO47_RS11645;Dbxref=GenBank:WP_001129966.1;Name=WP_001129966.1;gbkey=CDS;gene=srfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=CCO47_RS11645;product=virulence-associated effector SrfA;protein_id=WP_001129966.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2390431 2393412 . + . ID=gene-CCO47_RS11650;Name=CCO47_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11650;old_locus_tag=CCO47_11650 NZ_CP075113.1 Protein Homology CDS 2390431 2393412 . + 0 ID=cds-WP_000960825.1;Parent=gene-CCO47_RS11650;Dbxref=GenBank:WP_000960825.1;Name=WP_000960825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=CCO47_RS11650;product=virulence factor SrfB;protein_id=WP_000960825.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2393409 2395553 . + . ID=gene-CCO47_RS11655;Name=srfC;gbkey=Gene;gene=srfC;gene_biotype=protein_coding;locus_tag=CCO47_RS11655;old_locus_tag=CCO47_11655 NZ_CP075113.1 Protein Homology CDS 2393409 2395553 . + 0 ID=cds-WP_000165629.1;Parent=gene-CCO47_RS11655;Dbxref=GenBank:WP_000165629.1;Name=WP_000165629.1;gbkey=CDS;gene=srfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460554.1;locus_tag=CCO47_RS11655;product=virulence-associated effector SrfC;protein_id=WP_000165629.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2395598 2395771 . - . ID=gene-CCO47_RS11660;Name=CCO47_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11660;old_locus_tag=CCO47_11660 NZ_CP075113.1 Protein Homology CDS 2395598 2395771 . - 0 ID=cds-WP_000171943.1;Parent=gene-CCO47_RS11660;Dbxref=GenBank:WP_000171943.1;Name=WP_000171943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=CCO47_RS11660;product=GhoT/OrtT family toxin;protein_id=WP_000171943.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2395970 2396065 . + . ID=gene-CCO47_RS11665;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=CCO47_RS11665;old_locus_tag=CCO47_11665 NZ_CP075113.1 Protein Homology CDS 2395970 2396065 . + 0 ID=cds-WP_001103198.1;Parent=gene-CCO47_RS11665;Dbxref=GenBank:WP_001103198.1;Name=WP_001103198.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=CCO47_RS11665;product=stress response membrane protein YncL;protein_id=WP_001103198.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2396170 2397615 . - . ID=gene-CCO47_RS11670;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=CCO47_RS11670;old_locus_tag=CCO47_11670 NZ_CP075113.1 Protein Homology CDS 2396170 2397615 . - 0 ID=cds-WP_000158100.1;Parent=gene-CCO47_RS11670;Dbxref=GenBank:WP_000158100.1;Name=WP_000158100.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460556.3;locus_tag=CCO47_RS11670;product=aminobutyraldehyde dehydrogenase;protein_id=WP_000158100.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2397730 2399154 . - . ID=gene-CCO47_RS11675;Name=ycdR;gbkey=Gene;gene=ycdR;gene_biotype=protein_coding;locus_tag=CCO47_RS11675;old_locus_tag=CCO47_11675 NZ_CP075113.1 Protein Homology CDS 2397730 2399154 . - 0 ID=cds-WP_000760691.1;Parent=gene-CCO47_RS11675;Dbxref=GenBank:WP_000760691.1;Name=WP_000760691.1;gbkey=CDS;gene=ycdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=CCO47_RS11675;product=GntR family transcriptional regulator YdcR;protein_id=WP_000760691.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2399290 2400060 . - . ID=gene-CCO47_RS11680;Name=CCO47_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11680;old_locus_tag=CCO47_11680 NZ_CP075113.1 Protein Homology CDS 2399290 2400060 . - 0 ID=cds-WP_000237718.1;Parent=gene-CCO47_RS11680;Dbxref=GenBank:WP_000237718.1;Name=WP_000237718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460558.1;locus_tag=CCO47_RS11680;product=M15 family metallopeptidase;protein_id=WP_000237718.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2400319 2400549 . - . ID=gene-CCO47_RS11685;Name=CCO47_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11685;old_locus_tag=CCO47_11685 NZ_CP075113.1 Protein Homology CDS 2400319 2400549 . - 0 ID=cds-WP_001597849.1;Parent=gene-CCO47_RS11685;Dbxref=GenBank:WP_001597849.1;Name=WP_001597849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448018.1;locus_tag=CCO47_RS11685;product=hypothetical protein;protein_id=WP_001597849.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2400582 2400980 . - . ID=gene-CCO47_RS11690;Name=ugtL;gbkey=Gene;gene=ugtL;gene_biotype=protein_coding;locus_tag=CCO47_RS11690;old_locus_tag=CCO47_11690 NZ_CP075113.1 Protein Homology CDS 2400582 2400980 . - 0 ID=cds-WP_000747901.1;Parent=gene-CCO47_RS11690;Dbxref=GenBank:WP_000747901.1;Name=WP_000747901.1;gbkey=CDS;gene=ugtL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460560.1;locus_tag=CCO47_RS11690;product=regulatory protein UgtL;protein_id=WP_000747901.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2401509 2402459 . + . ID=gene-CCO47_RS11695;Name=sifB;gbkey=Gene;gene=sifB;gene_biotype=protein_coding;locus_tag=CCO47_RS11695;old_locus_tag=CCO47_11695 NZ_CP075113.1 Protein Homology CDS 2401509 2402459 . + 0 ID=cds-WP_001122922.1;Parent=gene-CCO47_RS11695;Dbxref=GenBank:WP_001122922.1;Name=WP_001122922.1;gbkey=CDS;gene=sifB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460561.1;locus_tag=CCO47_RS11695;product=SPI-2 type III secretion system effector SifB;protein_id=WP_001122922.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2402733 2402963 . + . ID=gene-CCO47_RS11700;Name=CCO47_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11700;old_locus_tag=CCO47_11700 NZ_CP075113.1 Protein Homology CDS 2402733 2402963 . + 0 ID=cds-WP_000956438.1;Parent=gene-CCO47_RS11700;Dbxref=GenBank:WP_000956438.1;Name=WP_000956438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460562.1;locus_tag=CCO47_RS11700;product=DUF2554 family protein;protein_id=WP_000956438.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2402964 2404928 . - . ID=gene-CCO47_RS11705;Name=CCO47_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11705;old_locus_tag=CCO47_11705 NZ_CP075113.1 Protein Homology CDS 2402964 2404928 . - 0 ID=cds-WP_001249756.1;Parent=gene-CCO47_RS11705;Dbxref=GenBank:WP_001249756.1;Name=WP_001249756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=CCO47_RS11705;product=peptidase U32 family protein;protein_id=WP_001249756.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2405007 2405543 . - . ID=gene-CCO47_RS11710;Name=CCO47_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11710;old_locus_tag=CCO47_11710 NZ_CP075113.1 Protein Homology CDS 2405007 2405543 . - 0 ID=cds-WP_000369537.1;Parent=gene-CCO47_RS11710;Dbxref=GenBank:WP_000369537.1;Name=WP_000369537.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460564.1;locus_tag=CCO47_RS11710;product=helix-turn-helix domain-containing protein;protein_id=WP_000369537.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2405635 2406813 . + . ID=gene-CCO47_RS11715;Name=CCO47_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11715;old_locus_tag=CCO47_11715 NZ_CP075113.1 Protein Homology CDS 2405635 2406813 . + 0 ID=cds-WP_001238492.1;Parent=gene-CCO47_RS11715;Dbxref=GenBank:WP_001238492.1;Name=WP_001238492.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=CCO47_RS11715;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_001238492.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2406867 2407535 . - . ID=gene-CCO47_RS11720;Name=CCO47_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11720;old_locus_tag=CCO47_11720 NZ_CP075113.1 Protein Homology CDS 2406867 2407535 . - 0 ID=cds-WP_001259025.1;Parent=gene-CCO47_RS11720;Dbxref=GenBank:WP_001259025.1;Name=WP_001259025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460566.1;locus_tag=CCO47_RS11720;product=DUF3313 domain-containing protein;protein_id=WP_001259025.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2407691 2408287 . - . ID=gene-CCO47_RS11725;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=CCO47_RS11725;old_locus_tag=CCO47_11725 NZ_CP075113.1 Protein Homology CDS 2407691 2408287 . - 0 ID=cds-WP_000218280.1;Parent=gene-CCO47_RS11725;Dbxref=GenBank:WP_000218280.1;Name=WP_000218280.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=CCO47_RS11725;product=tellurite resistance methyltransferase TehB;protein_id=WP_000218280.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2408274 2409287 . - . ID=gene-CCO47_RS11730;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=CCO47_RS11730;old_locus_tag=CCO47_11730 NZ_CP075113.1 Protein Homology CDS 2408274 2409287 . - 0 ID=cds-WP_001243996.1;Parent=gene-CCO47_RS11730;Dbxref=GenBank:WP_001243996.1;Name=WP_001243996.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460568.1;locus_tag=CCO47_RS11730;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_001243996.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2409394 2410374 . + . ID=gene-CCO47_RS11735;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=CCO47_RS11735;old_locus_tag=CCO47_11735 NZ_CP075113.1 Protein Homology CDS 2409394 2410374 . + 0 ID=cds-WP_000599086.1;Parent=gene-CCO47_RS11735;Dbxref=GenBank:WP_000599086.1;Name=WP_000599086.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460569.1;locus_tag=CCO47_RS11735;product=YdcK family protein;protein_id=WP_000599086.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2410371 2410910 . - . ID=gene-CCO47_RS11740;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=CCO47_RS11740;old_locus_tag=CCO47_11740 NZ_CP075113.1 Protein Homology CDS 2410371 2410910 . - 0 ID=cds-WP_000229306.1;Parent=gene-CCO47_RS11740;Dbxref=GenBank:WP_000229306.1;Name=WP_000229306.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460570.1;locus_tag=CCO47_RS11740;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_000229306.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2411127 2412245 . + . ID=gene-CCO47_RS11745;Name=CCO47_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11745;old_locus_tag=CCO47_11745 NZ_CP075113.1 Protein Homology CDS 2411127 2412245 . + 0 ID=cds-WP_000144629.1;Parent=gene-CCO47_RS11745;Dbxref=GenBank:WP_000144629.1;Name=WP_000144629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460571.1;locus_tag=CCO47_RS11745;product=M42 family metallopeptidase;protein_id=WP_000144629.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2412242 2412523 . + . ID=gene-CCO47_RS11750;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;locus_tag=CCO47_RS11750;old_locus_tag=CCO47_11750 NZ_CP075113.1 Protein Homology CDS 2412242 2412523 . + 0 ID=cds-WP_000976131.1;Parent=gene-CCO47_RS11750;Dbxref=GenBank:WP_000976131.1;Name=WP_000976131.1;gbkey=CDS;gene=sgcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460572.1;locus_tag=CCO47_RS11750;product=PTS sugar transporter subunit IIB SgcB;protein_id=WP_000976131.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2412534 2413847 . + . ID=gene-CCO47_RS11755;Name=sgcC;gbkey=Gene;gene=sgcC;gene_biotype=protein_coding;locus_tag=CCO47_RS11755;old_locus_tag=CCO47_11755 NZ_CP075113.1 Protein Homology CDS 2412534 2413847 . + 0 ID=cds-WP_000460835.1;Parent=gene-CCO47_RS11755;Dbxref=GenBank:WP_000460835.1;Name=WP_000460835.1;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=CCO47_RS11755;product=PTS sugar transporter subunit IIC SgcC;protein_id=WP_000460835.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2413861 2414667 . + . ID=gene-CCO47_RS11760;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=CCO47_RS11760;old_locus_tag=CCO47_11760 NZ_CP075113.1 Protein Homology CDS 2413861 2414667 . + 0 ID=cds-WP_000118619.1;Parent=gene-CCO47_RS11760;Dbxref=GenBank:WP_000118619.1;Name=WP_000118619.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=CCO47_RS11760;product=BtpA family protein SgcQ;protein_id=WP_000118619.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2414799 2415236 . + . ID=gene-CCO47_RS11765;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;locus_tag=CCO47_RS11765;old_locus_tag=CCO47_11765 NZ_CP075113.1 Protein Homology CDS 2414799 2415236 . + 0 ID=cds-WP_000606454.1;Parent=gene-CCO47_RS11765;Dbxref=GenBank:WP_000606454.1;Name=WP_000606454.1;gbkey=CDS;gene=sgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460575.1;locus_tag=CCO47_RS11765;product=SgcA family PTS sugar transporter subunit IIA;protein_id=WP_000606454.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2415248 2415880 . + . ID=gene-CCO47_RS11770;Name=CCO47_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11770;old_locus_tag=CCO47_11770 NZ_CP075113.1 Protein Homology CDS 2415248 2415880 . + 0 ID=cds-WP_000600619.1;Parent=gene-CCO47_RS11770;Dbxref=GenBank:WP_000600619.1;Name=WP_000600619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460576.1;locus_tag=CCO47_RS11770;product=ribulose-phosphate 3 epimerase family protein;protein_id=WP_000600619.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2415896 2416687 . + . ID=gene-CCO47_RS11775;Name=CCO47_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11775;old_locus_tag=CCO47_11775 NZ_CP075113.1 Protein Homology CDS 2415896 2416687 . + 0 ID=cds-WP_001670738.1;Parent=gene-CCO47_RS11775;Dbxref=GenBank:WP_001670738.1;Name=WP_001670738.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460577.1;locus_tag=CCO47_RS11775;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001670738.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2416687 2417124 . + . ID=gene-CCO47_RS11780;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=CCO47_RS11780;old_locus_tag=CCO47_11780 NZ_CP075113.1 Protein Homology CDS 2416687 2417124 . + 0 ID=cds-WP_000354860.1;Parent=gene-CCO47_RS11780;Dbxref=GenBank:WP_000354860.1;Name=WP_000354860.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=CCO47_RS11780;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=WP_000354860.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2417171 2418307 . - . ID=gene-CCO47_RS11785;Name=CCO47_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11785;old_locus_tag=CCO47_11785 NZ_CP075113.1 Protein Homology CDS 2417171 2418307 . - 0 ID=cds-WP_000848094.1;Parent=gene-CCO47_RS11785;Dbxref=GenBank:WP_000848094.1;Name=WP_000848094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460579.1;locus_tag=CCO47_RS11785;product=lactate oxidase;protein_id=WP_000848094.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2418319 2418894 . - . ID=gene-CCO47_RS11790;Name=CCO47_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11790;old_locus_tag=CCO47_11790 NZ_CP075113.1 Protein Homology CDS 2418319 2418894 . - 0 ID=cds-WP_001024305.1;Parent=gene-CCO47_RS11790;Dbxref=GenBank:WP_001024305.1;Name=WP_001024305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460580.1;locus_tag=CCO47_RS11790;product=YceI family protein;protein_id=WP_001024305.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2419090 2420745 . - . ID=gene-CCO47_RS11795;Name=CCO47_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11795;old_locus_tag=CCO47_11795 NZ_CP075113.1 Protein Homology CDS 2419090 2420745 . - 0 ID=cds-WP_001081957.1;Parent=gene-CCO47_RS11795;Dbxref=GenBank:WP_001081957.1;Name=WP_001081957.1;Ontology_term=GO:0009250,GO:0051274,GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;go_process=glucan biosynthetic process|0009250||IEA,beta-glucan biosynthetic process|0051274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=CCO47_RS11795;product=glucan biosynthesis protein D;protein_id=WP_001081957.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2420965 2422473 . - . ID=gene-CCO47_RS11800;Name=CCO47_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11800;old_locus_tag=CCO47_11800 NZ_CP075113.1 Protein Homology CDS 2420965 2422473 . - 0 ID=cds-WP_000933978.1;Parent=gene-CCO47_RS11800;Dbxref=GenBank:WP_000933978.1;Name=WP_000933978.1;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=CCO47_RS11800;product=carboxylesterase/lipase family protein;protein_id=WP_000933978.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2422522 2423865 . - . ID=gene-CCO47_RS11805;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=CCO47_RS11805;old_locus_tag=CCO47_11805 NZ_CP075113.1 Protein Homology CDS 2422522 2423865 . - 0 ID=cds-WP_000024096.1;Parent=gene-CCO47_RS11805;Dbxref=GenBank:WP_000024096.1;Name=WP_000024096.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=CCO47_RS11805;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_000024096.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2424158 2425081 . + . ID=gene-CCO47_RS11810;Name=CCO47_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11810;old_locus_tag=CCO47_11810 NZ_CP075113.1 Protein Homology CDS 2424158 2425081 . + 0 ID=cds-WP_000414259.1;Parent=gene-CCO47_RS11810;Dbxref=GenBank:WP_000414259.1;Name=WP_000414259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=CCO47_RS11810;product=LysR substrate-binding domain-containing protein;protein_id=WP_000414259.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2425142 2426767 . - . ID=gene-CCO47_RS11815;Name=CCO47_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11815;old_locus_tag=CCO47_11815 NZ_CP075113.1 Protein Homology CDS 2425142 2426767 . - 0 ID=cds-WP_000528483.1;Parent=gene-CCO47_RS11815;Dbxref=GenBank:WP_000528483.1;Name=WP_000528483.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=CCO47_RS11815;product=methyl-accepting chemotaxis protein;protein_id=WP_000528483.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2426936 2428054 . - . ID=gene-CCO47_RS11820;Name=CCO47_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11820;old_locus_tag=CCO47_11820 NZ_CP075113.1 Protein Homology CDS 2426936 2428054 . - 0 ID=cds-WP_000842143.1;Parent=gene-CCO47_RS11820;Dbxref=GenBank:WP_000842143.1;Name=WP_000842143.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=CCO47_RS11820;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_000842143.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2428086 2428361 . - . ID=gene-CCO47_RS11825;Name=CCO47_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11825;old_locus_tag=CCO47_11825 NZ_CP075113.1 Protein Homology CDS 2428086 2428361 . - 0 ID=cds-WP_001120770.1;Parent=gene-CCO47_RS11825;Dbxref=GenBank:WP_001120770.1;Name=WP_001120770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=CCO47_RS11825;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_001120770.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2428884 2429285 . + . ID=gene-CCO47_RS11830;Name=steB;gbkey=Gene;gene=steB;gene_biotype=protein_coding;locus_tag=CCO47_RS11830;old_locus_tag=CCO47_11830 NZ_CP075113.1 Protein Homology CDS 2428884 2429285 . + 0 ID=cds-WP_001540100.1;Parent=gene-CCO47_RS11830;Dbxref=GenBank:WP_001540100.1;Name=WP_001540100.1;gbkey=CDS;gene=steB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448047.1;locus_tag=CCO47_RS11830;product=type III secretion system effector SteB;protein_id=WP_001540100.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2429414 2430129 . - . ID=gene-CCO47_RS11835;Name=CCO47_RS11835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS11835;old_locus_tag=CCO47_11835;pseudo=true NZ_CP075113.1 Protein Homology CDS 2429414 2430129 . - 0 ID=cds-CCO47_RS11835;Parent=gene-CCO47_RS11835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=CCO47_RS11835;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2430555 2431781 . + . ID=gene-CCO47_RS11840;Name=sseJ;gbkey=Gene;gene=sseJ;gene_biotype=protein_coding;locus_tag=CCO47_RS11840;old_locus_tag=CCO47_11840 NZ_CP075113.1 Protein Homology CDS 2430555 2431781 . + 0 ID=cds-WP_001131425.1;Parent=gene-CCO47_RS11840;Dbxref=GenBank:WP_001131425.1;Name=WP_001131425.1;gbkey=CDS;gene=sseJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=CCO47_RS11840;product=SPI-2 type III secretion system effector SseJ;protein_id=WP_001131425.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2431902 2432246 . - . ID=gene-CCO47_RS11845;Name=CCO47_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11845;old_locus_tag=CCO47_11845 NZ_CP075113.1 Protein Homology CDS 2431902 2432246 . - 0 ID=cds-WP_000281187.1;Parent=gene-CCO47_RS11845;Dbxref=GenBank:WP_000281187.1;Name=WP_000281187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460591.1;locus_tag=CCO47_RS11845;product=DUF1294 domain-containing protein;protein_id=WP_000281187.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2433153 2433914 . + . ID=gene-CCO47_RS11850;Name=CCO47_RS11850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS11850;old_locus_tag=CCO47_11850;pseudo=true NZ_CP075113.1 Protein Homology CDS 2433153 2433914 . + 0 ID=cds-CCO47_RS11850;Parent=gene-CCO47_RS11850;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460592.1;locus_tag=CCO47_RS11850;product=transporter substrate-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2433921 2434568 . + . ID=gene-CCO47_RS11855;Name=CCO47_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11855;old_locus_tag=CCO47_11855 NZ_CP075113.1 Protein Homology CDS 2433921 2434568 . + 0 ID=cds-WP_000094446.1;Parent=gene-CCO47_RS11855;Dbxref=GenBank:WP_000094446.1;Name=WP_000094446.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460593.1;locus_tag=CCO47_RS11855;product=amino acid ABC transporter permease;protein_id=WP_000094446.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2434593 2435324 . + . ID=gene-CCO47_RS11860;Name=CCO47_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11860;old_locus_tag=CCO47_11860 NZ_CP075113.1 Protein Homology CDS 2434593 2435324 . + 0 ID=cds-WP_001196340.1;Parent=gene-CCO47_RS11860;Dbxref=GenBank:WP_001196340.1;Name=WP_001196340.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460594.1;locus_tag=CCO47_RS11860;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_001196340.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2435321 2436001 . + . ID=gene-CCO47_RS11865;Name=CCO47_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11865;old_locus_tag=CCO47_11865 NZ_CP075113.1 Protein Homology CDS 2435321 2436001 . + 0 ID=cds-WP_000560166.1;Parent=gene-CCO47_RS11865;Dbxref=GenBank:WP_000560166.1;Name=WP_000560166.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460595.1;locus_tag=CCO47_RS11865;product=amino acid ABC transporter permease;protein_id=WP_000560166.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2436138 2437688 . + . ID=gene-CCO47_RS11870;Name=CCO47_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11870;old_locus_tag=CCO47_11870 NZ_CP075113.1 Protein Homology CDS 2436138 2437688 . + 0 ID=cds-WP_001574292.1;Parent=gene-CCO47_RS11870;Dbxref=GenBank:WP_001574292.1;Name=WP_001574292.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460596.1;locus_tag=CCO47_RS11870;product=glycosyltransferase family 39 protein;protein_id=WP_001574292.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2438152 2438814 . + . ID=gene-CCO47_RS11875;Name=CCO47_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11875;old_locus_tag=CCO47_11875 NZ_CP075113.1 Protein Homology CDS 2438152 2438814 . + 0 ID=cds-WP_000683309.1;Parent=gene-CCO47_RS11875;Dbxref=GenBank:WP_000683309.1;Name=WP_000683309.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576082.1;locus_tag=CCO47_RS11875;product=class I SAM-dependent methyltransferase;protein_id=WP_000683309.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2439085 2439615 . - . ID=gene-CCO47_RS11880;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=CCO47_RS11880;old_locus_tag=CCO47_11880 NZ_CP075113.1 Protein Homology CDS 2439085 2439615 . - 0 ID=cds-WP_000527280.1;Parent=gene-CCO47_RS11880;Dbxref=GenBank:WP_000527280.1;Name=WP_000527280.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=CCO47_RS11880;product=cytochrome b561;protein_id=WP_000527280.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2439732 2440532 . - . ID=gene-CCO47_RS11885;Name=CCO47_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11885;old_locus_tag=CCO47_11885 NZ_CP075113.1 Protein Homology CDS 2439732 2440532 . - 0 ID=cds-WP_001098507.1;Parent=gene-CCO47_RS11885;Dbxref=GenBank:WP_001098507.1;Name=WP_001098507.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460599.1;locus_tag=CCO47_RS11885;product=YdcF family protein;protein_id=WP_001098507.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2440596 2444498 . - . ID=gene-CCO47_RS11890;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=CCO47_RS11890;old_locus_tag=CCO47_11890 NZ_CP075113.1 Protein Homology CDS 2440596 2444498 . - 0 ID=cds-WP_001574290.1;Parent=gene-CCO47_RS11890;Dbxref=GenBank:WP_001574290.1;Name=WP_001574290.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=CCO47_RS11890;product=ATP-dependent RNA helicase HrpA;protein_id=WP_001574290.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2444699 2445304 . + . ID=gene-CCO47_RS11895;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=CCO47_RS11895;old_locus_tag=CCO47_11895 NZ_CP075113.1 Protein Homology CDS 2444699 2445304 . + 0 ID=cds-WP_000048924.1;Parent=gene-CCO47_RS11895;Dbxref=GenBank:WP_000048924.1;Name=WP_000048924.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460601.1;locus_tag=CCO47_RS11895;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048924.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2445301 2445750 . - . ID=gene-CCO47_RS11900;Name=CCO47_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11900;old_locus_tag=CCO47_11900 NZ_CP075113.1 Protein Homology CDS 2445301 2445750 . - 0 ID=cds-WP_001531579.1;Parent=gene-CCO47_RS11900;Dbxref=GenBank:WP_001531579.1;Name=WP_001531579.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460602.1;locus_tag=CCO47_RS11900;product=GFA family protein;protein_id=WP_001531579.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2445893 2446216 . - . ID=gene-CCO47_RS11905;Name=CCO47_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11905;old_locus_tag=CCO47_11905 NZ_CP075113.1 Protein Homology CDS 2445893 2446216 . - 0 ID=cds-WP_000760414.1;Parent=gene-CCO47_RS11905;Dbxref=GenBank:WP_000760414.1;Name=WP_000760414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460603.1;locus_tag=CCO47_RS11905;product=YdbL family probable chaperone protein;protein_id=WP_000760414.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2446224 2446415 . - . ID=gene-CCO47_RS11910;Name=CCO47_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11910;old_locus_tag=CCO47_11910 NZ_CP075113.1 Protein Homology CDS 2446224 2446415 . - 0 ID=cds-WP_000784063.1;Parent=gene-CCO47_RS11910;Dbxref=GenBank:WP_000784063.1;Name=WP_000784063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460604.1;locus_tag=CCO47_RS11910;product=YnbE family lipoprotein;protein_id=WP_000784063.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2446415 2449051 . - . ID=gene-CCO47_RS11915;Name=CCO47_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11915;old_locus_tag=CCO47_11915 NZ_CP075113.1 Protein Homology CDS 2446415 2449051 . - 0 ID=cds-WP_000677013.1;Parent=gene-CCO47_RS11915;Dbxref=GenBank:WP_000677013.1;Name=WP_000677013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460605.1;locus_tag=CCO47_RS11915;product=YdbH family protein;protein_id=WP_000677013.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2449291 2450280 . + . ID=gene-CCO47_RS11920;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=CCO47_RS11920;old_locus_tag=CCO47_11920 NZ_CP075113.1 Protein Homology CDS 2449291 2450280 . + 0 ID=cds-WP_000762206.1;Parent=gene-CCO47_RS11920;Dbxref=GenBank:WP_000762206.1;Name=WP_000762206.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460606.1;locus_tag=CCO47_RS11920;product=D-lactate dehydrogenase;protein_id=WP_000762206.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2450391 2450801 . + . ID=gene-CCO47_RS11925;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=CCO47_RS11925;old_locus_tag=CCO47_11925 NZ_CP075113.1 Protein Homology CDS 2450391 2450801 . + 0 ID=cds-WP_000750315.1;Parent=gene-CCO47_RS11925;Dbxref=GenBank:WP_000750315.1;Name=WP_000750315.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460607.1;locus_tag=CCO47_RS11925;product=heat shock protein HslJ;protein_id=WP_000750315.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2450845 2451111 . - . ID=gene-CCO47_RS11930;Name=CCO47_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11930;old_locus_tag=CCO47_11930 NZ_CP075113.1 Protein Homology CDS 2450845 2451111 . - 0 ID=cds-WP_001200680.1;Parent=gene-CCO47_RS11930;Dbxref=GenBank:WP_001200680.1;Name=WP_001200680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=CCO47_RS11930;product=putative hemolysin;protein_id=WP_001200680.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2451027 2451326 . + . ID=gene-CCO47_RS11935;Name=CCO47_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11935;old_locus_tag=CCO47_11935 NZ_CP075113.1 Protein Homology CDS 2451027 2451326 . + 0 ID=cds-WP_001137722.1;Parent=gene-CCO47_RS11935;Dbxref=GenBank:WP_001137722.1;Name=WP_001137722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=CCO47_RS11935;product=hypothetical protein;protein_id=WP_001137722.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2451387 2454911 . + . ID=gene-CCO47_RS11940;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=CCO47_RS11940;old_locus_tag=CCO47_11940 NZ_CP075113.1 Protein Homology CDS 2451387 2454911 . + 0 ID=cds-WP_001193266.1;Parent=gene-CCO47_RS11940;Dbxref=GenBank:WP_001193266.1;Name=WP_001193266.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=CCO47_RS11940;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_001193266.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2455393 2455827 . + . ID=gene-CCO47_RS11945;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=CCO47_RS11945;old_locus_tag=CCO47_11945 NZ_CP075113.1 Protein Homology CDS 2455393 2455827 . + 0 ID=cds-WP_001082296.1;Parent=gene-CCO47_RS11945;Dbxref=GenBank:WP_001082296.1;Name=WP_001082296.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460611.1;locus_tag=CCO47_RS11945;product=universal stress protein UspF;protein_id=WP_001082296.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2455877 2456215 . - . ID=gene-CCO47_RS11950;Name=CCO47_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11950;old_locus_tag=CCO47_11950 NZ_CP075113.1 Protein Homology CDS 2455877 2456215 . - 0 ID=cds-WP_000159240.1;Parent=gene-CCO47_RS11950;Dbxref=GenBank:WP_000159240.1;Name=WP_000159240.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460612.1;locus_tag=CCO47_RS11950;product=SMR family transporter;protein_id=WP_000159240.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2456208 2456360 . - . ID=gene-CCO47_RS24360;Name=CCO47_RS24360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24360 NZ_CP075113.1 Protein Homology CDS 2456208 2456360 . - 0 ID=cds-WP_000089155.1;Parent=gene-CCO47_RS24360;Dbxref=GenBank:WP_000089155.1;Name=WP_000089155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465579.1;locus_tag=CCO47_RS24360;product=hypothetical protein;protein_id=WP_000089155.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2456316 2456519 . + . ID=gene-CCO47_RS11955;Name=CCO47_RS11955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS11955;old_locus_tag=CCO47_11955;partial=true;pseudo=true;start_range=.,2456316 NZ_CP075113.1 Protein Homology CDS 2456316 2456519 . + 0 ID=cds-CCO47_RS11955;Parent=gene-CCO47_RS11955;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=CCO47_RS11955;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,2456316;transl_table=11 NZ_CP075113.1 RefSeq gene 2456571 2457506 . + . ID=gene-CCO47_RS11960;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=CCO47_RS11960;old_locus_tag=CCO47_11960 NZ_CP075113.1 Protein Homology CDS 2456571 2457506 . + 0 ID=cds-WP_001156217.1;Parent=gene-CCO47_RS11960;Dbxref=GenBank:WP_001156217.1;Name=WP_001156217.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460613.1;locus_tag=CCO47_RS11960;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_001156217.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2457550 2458923 . - . ID=gene-CCO47_RS11965;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=CCO47_RS11965;old_locus_tag=CCO47_11965 NZ_CP075113.1 Protein Homology CDS 2457550 2458923 . - 0 ID=cds-WP_000123677.1;Parent=gene-CCO47_RS11965;Dbxref=GenBank:WP_000123677.1;Name=WP_000123677.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=CCO47_RS11965;product=ATP-dependent RNA helicase DbpA;protein_id=WP_000123677.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2458952 2459134 . - . ID=gene-CCO47_RS24565;Name=ynaL;gbkey=Gene;gene=ynaL;gene_biotype=protein_coding;locus_tag=CCO47_RS24565 NZ_CP075113.1 Protein Homology CDS 2458952 2459134 . - 0 ID=cds-WP_001670836.1;Parent=gene-CCO47_RS24565;Dbxref=GenBank:WP_001670836.1;Name=WP_001670836.1;gbkey=CDS;gene=ynaL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_271267465.1;locus_tag=CCO47_RS24565;product=proline-rich small protein YnaL;protein_id=WP_001670836.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2459408 2460391 . - . ID=gene-CCO47_RS11970;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=CCO47_RS11970;old_locus_tag=CCO47_11970 NZ_CP075113.1 Protein Homology CDS 2459408 2460391 . - 0 ID=cds-WP_000387374.1;Parent=gene-CCO47_RS11970;Dbxref=GenBank:WP_000387374.1;Name=WP_000387374.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=CCO47_RS11970;product=zinc transporter ZntB;protein_id=WP_000387374.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2460537 2461691 . - . ID=gene-CCO47_RS11975;Name=CCO47_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS11975;old_locus_tag=CCO47_11975 NZ_CP075113.1 Protein Homology CDS 2460537 2461691 . - 0 ID=cds-WP_000945627.1;Parent=gene-CCO47_RS11975;Dbxref=GenBank:WP_000945627.1;Name=WP_000945627.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460616.1;locus_tag=CCO47_RS11975;product=methyl-accepting chemotaxis protein;protein_id=WP_000945627.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2462102 2462665 . - . ID=gene-CCO47_RS11980;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=CCO47_RS11980;old_locus_tag=CCO47_11980 NZ_CP075113.1 Protein Homology CDS 2462102 2462665 . - 0 ID=cds-WP_001046799.1;Parent=gene-CCO47_RS11980;Dbxref=GenBank:WP_001046799.1;Name=WP_001046799.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=CCO47_RS11980;product=DNA endonuclease SmrA;protein_id=WP_001046799.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2462923 2463438 . + . ID=gene-CCO47_RS11985;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=CCO47_RS11985;old_locus_tag=CCO47_11985 NZ_CP075113.1 Protein Homology CDS 2462923 2463438 . + 0 ID=cds-WP_000945036.1;Parent=gene-CCO47_RS11985;Dbxref=GenBank:WP_000945036.1;Name=WP_000945036.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460618.1;locus_tag=CCO47_RS11985;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945036.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2463634 2464386 . + . ID=gene-CCO47_RS11990;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=CCO47_RS11990;old_locus_tag=CCO47_11990 NZ_CP075113.1 Protein Homology CDS 2463634 2464386 . + 0 ID=cds-WP_000611914.1;Parent=gene-CCO47_RS11990;Dbxref=GenBank:WP_000611914.1;Name=WP_000611914.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=CCO47_RS11990;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611914.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2464537 2465484 . + . ID=gene-CCO47_RS11995;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=CCO47_RS11995;old_locus_tag=CCO47_11995 NZ_CP075113.1 Protein Homology CDS 2464537 2465484 . + 0 ID=cds-WP_001262150.1;Parent=gene-CCO47_RS11995;Dbxref=GenBank:WP_001262150.1;Name=WP_001262150.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460620.1;locus_tag=CCO47_RS11995;product=universal stress protein UspE;protein_id=WP_001262150.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2465539 2465793 . - . ID=gene-CCO47_RS12000;Name=CCO47_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12000;old_locus_tag=CCO47_12000 NZ_CP075113.1 Protein Homology CDS 2465539 2465793 . - 0 ID=cds-WP_000605645.1;Parent=gene-CCO47_RS12000;Dbxref=GenBank:WP_000605645.1;Name=WP_000605645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460621.1;locus_tag=CCO47_RS12000;product=DUF2534 family protein;protein_id=WP_000605645.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2466032 2467063 . + . ID=gene-CCO47_RS12005;Name=CCO47_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12005;old_locus_tag=CCO47_12005 NZ_CP075113.1 Protein Homology CDS 2466032 2467063 . + 0 ID=cds-WP_000493666.1;Parent=gene-CCO47_RS12005;Dbxref=GenBank:WP_000493666.1;Name=WP_000493666.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460622.1;locus_tag=CCO47_RS12005;product=mechanosensitive ion channel family protein;protein_id=WP_000493666.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2467149 2467751 . - . ID=gene-CCO47_RS12010;Name=CCO47_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12010;old_locus_tag=CCO47_12010 NZ_CP075113.1 Protein Homology CDS 2467149 2467751 . - 0 ID=cds-WP_000163368.1;Parent=gene-CCO47_RS12010;Dbxref=GenBank:WP_000163368.1;Name=WP_000163368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460623.1;locus_tag=CCO47_RS12010;product=helix-turn-helix domain-containing protein;protein_id=WP_000163368.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2467795 2468481 . + . ID=gene-CCO47_RS12015;Name=CCO47_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12015;old_locus_tag=CCO47_12015 NZ_CP075113.1 Protein Homology CDS 2467795 2468481 . + 0 ID=cds-WP_000097265.1;Parent=gene-CCO47_RS12015;Dbxref=GenBank:WP_000097265.1;Name=WP_000097265.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460624.1;locus_tag=CCO47_RS12015;product=B3/B4 domain-containing protein;protein_id=WP_000097265.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2468509 2468847 . + . ID=gene-CCO47_RS12020;Name=CCO47_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12020;old_locus_tag=CCO47_12020 NZ_CP075113.1 Protein Homology CDS 2468509 2468847 . + 0 ID=cds-WP_000051816.1;Parent=gene-CCO47_RS12020;Dbxref=GenBank:WP_000051816.1;Name=WP_000051816.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051808.1;locus_tag=CCO47_RS12020;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_000051816.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2468954 2469511 . - . ID=gene-CCO47_RS12025;Name=CCO47_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12025;old_locus_tag=CCO47_12025 NZ_CP075113.1 Protein Homology CDS 2468954 2469511 . - 0 ID=cds-WP_001119109.1;Parent=gene-CCO47_RS12025;Dbxref=GenBank:WP_001119109.1;Name=WP_001119109.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460625.1;locus_tag=CCO47_RS12025;product=redoxin family protein;protein_id=WP_001119109.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2469610 2470434 . - . ID=gene-CCO47_RS12030;Name=zirS;gbkey=Gene;gene=zirS;gene_biotype=protein_coding;locus_tag=CCO47_RS12030;old_locus_tag=CCO47_12030 NZ_CP075113.1 Protein Homology CDS 2469610 2470434 . - 0 ID=cds-WP_000033766.1;Parent=gene-CCO47_RS12030;Dbxref=GenBank:WP_000033766.1;Name=WP_000033766.1;gbkey=CDS;gene=zirS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033768.1;locus_tag=CCO47_RS12030;product=two-partner-like secretion system exoprotein ZirS;protein_id=WP_000033766.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2470461 2472443 . - . ID=gene-CCO47_RS12035;Name=zirT;gbkey=Gene;gene=zirT;gene_biotype=protein_coding;locus_tag=CCO47_RS12035;old_locus_tag=CCO47_12035 NZ_CP075113.1 Protein Homology CDS 2470461 2472443 . - 0 ID=cds-WP_000232034.1;Parent=gene-CCO47_RS12035;Dbxref=GenBank:WP_000232034.1;Name=WP_000232034.1;gbkey=CDS;gene=zirT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=CCO47_RS12035;product=two-partner secretion translocator ZirT;protein_id=WP_000232034.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2472518 2473363 . - . ID=gene-CCO47_RS12040;Name=zirU;gbkey=Gene;gene=zirU;gene_biotype=protein_coding;locus_tag=CCO47_RS12040;old_locus_tag=CCO47_12040 NZ_CP075113.1 Protein Homology CDS 2472518 2473363 . - 0 ID=cds-WP_000273691.1;Parent=gene-CCO47_RS12040;Dbxref=GenBank:WP_000273691.1;Name=WP_000273691.1;gbkey=CDS;gene=zirU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460628.1;locus_tag=CCO47_RS12040;product=two-partner-like secretion system exoprotein ZirU;protein_id=WP_000273691.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2473657 2474514 . + . ID=gene-CCO47_RS12045;Name=CCO47_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12045;old_locus_tag=CCO47_12045 NZ_CP075113.1 Protein Homology CDS 2473657 2474514 . + 0 ID=cds-WP_001574283.1;Parent=gene-CCO47_RS12045;Dbxref=GenBank:WP_001574283.1;Name=WP_001574283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=CCO47_RS12045;product=GyrI-like domain-containing protein;protein_id=WP_001574283.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2474906 2476015 . + . ID=gene-CCO47_RS12050;Name=CCO47_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12050;old_locus_tag=CCO47_12050 NZ_CP075113.1 Protein Homology CDS 2474906 2476015 . + 0 ID=cds-WP_000275516.1;Parent=gene-CCO47_RS12050;Dbxref=GenBank:WP_000275516.1;Name=WP_000275516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=CCO47_RS12050;product=hypothetical protein;protein_id=WP_000275516.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2476229 2476465 . - . ID=gene-CCO47_RS12055;Name=CCO47_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12055;old_locus_tag=CCO47_12055 NZ_CP075113.1 Protein Homology CDS 2476229 2476465 . - 0 ID=cds-WP_001168014.1;Parent=gene-CCO47_RS12055;Dbxref=GenBank:WP_001168014.1;Name=WP_001168014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168019.1;locus_tag=CCO47_RS12055;product=YgdI/YgdR family lipoprotein;protein_id=WP_001168014.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2476594 2477184 . - . ID=gene-CCO47_RS12060;Name=CCO47_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12060;old_locus_tag=CCO47_12060 NZ_CP075113.1 Protein Homology CDS 2476594 2477184 . - 0 ID=cds-WP_000208474.1;Parent=gene-CCO47_RS12060;Dbxref=GenBank:WP_000208474.1;Name=WP_000208474.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460632.1;locus_tag=CCO47_RS12060;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000208474.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2477262 2477975 . + . ID=gene-CCO47_RS12065;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=CCO47_RS12065;old_locus_tag=CCO47_12065 NZ_CP075113.1 Protein Homology CDS 2477262 2477975 . + 0 ID=cds-WP_000979084.1;Parent=gene-CCO47_RS12065;Dbxref=GenBank:WP_000979084.1;Name=WP_000979084.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460633.1;locus_tag=CCO47_RS12065;product=SDR family oxidoreductase;protein_id=WP_000979084.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2478066 2478935 . - . ID=gene-CCO47_RS12070;Name=CCO47_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12070;old_locus_tag=CCO47_12070 NZ_CP075113.1 Protein Homology CDS 2478066 2478935 . - 0 ID=cds-WP_000456781.1;Parent=gene-CCO47_RS12070;Dbxref=GenBank:WP_000456781.1;Name=WP_000456781.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460634.1;locus_tag=CCO47_RS12070;product=aldo/keto reductase;protein_id=WP_000456781.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2479211 2480116 . - . ID=gene-CCO47_RS12075;Name=CCO47_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12075;old_locus_tag=CCO47_12075 NZ_CP075113.1 Protein Homology CDS 2479211 2480116 . - 0 ID=cds-WP_000359196.1;Parent=gene-CCO47_RS12075;Dbxref=GenBank:WP_000359196.1;Name=WP_000359196.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460635.1;locus_tag=CCO47_RS12075;product=LysR family transcriptional regulator;protein_id=WP_000359196.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2480235 2481164 . + . ID=gene-CCO47_RS12080;Name=CCO47_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12080;old_locus_tag=CCO47_12080 NZ_CP075113.1 Protein Homology CDS 2480235 2481164 . + 0 ID=cds-WP_000814354.1;Parent=gene-CCO47_RS12080;Dbxref=GenBank:WP_000814354.1;Name=WP_000814354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460636.1;locus_tag=CCO47_RS12080;product=aromatic alcohol reductase;protein_id=WP_000814354.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2481261 2482874 . - . ID=gene-CCO47_RS12085;Name=CCO47_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12085;old_locus_tag=CCO47_12085 NZ_CP075113.1 Protein Homology CDS 2481261 2482874 . - 0 ID=cds-WP_001216563.1;Parent=gene-CCO47_RS12085;Dbxref=GenBank:WP_001216563.1;Name=WP_001216563.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460637.1;locus_tag=CCO47_RS12085;product=peptide ABC transporter substrate-binding protein;protein_id=WP_001216563.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2483064 2483792 . + . ID=gene-CCO47_RS12090;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=CCO47_RS12090;old_locus_tag=CCO47_12090 NZ_CP075113.1 Protein Homology CDS 2483064 2483792 . + 0 ID=cds-WP_000219106.1;Parent=gene-CCO47_RS12090;Dbxref=GenBank:WP_000219106.1;Name=WP_000219106.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460638.1;locus_tag=CCO47_RS12090;product=murein tripeptide amidase MpaA;protein_id=WP_000219106.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2483767 2484732 . - . ID=gene-CCO47_RS12095;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=CCO47_RS12095;old_locus_tag=CCO47_12095 NZ_CP075113.1 Protein Homology CDS 2483767 2484732 . - 0 ID=cds-WP_001258067.1;Parent=gene-CCO47_RS12095;Dbxref=GenBank:WP_001258067.1;Name=WP_001258067.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460639.1;locus_tag=CCO47_RS12095;product=L-Ala-D/L-Glu epimerase;protein_id=WP_001258067.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2484848 2485354 . + . ID=gene-CCO47_RS12100;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=CCO47_RS12100;old_locus_tag=CCO47_12100 NZ_CP075113.1 Protein Homology CDS 2484848 2485354 . + 0 ID=cds-WP_000084401.1;Parent=gene-CCO47_RS12100;Dbxref=GenBank:WP_000084401.1;Name=WP_000084401.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460640.1;locus_tag=CCO47_RS12100;product=thiol peroxidase;protein_id=WP_000084401.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2485444 2486985 . - . ID=gene-CCO47_RS12105;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=CCO47_RS12105;old_locus_tag=CCO47_12105 NZ_CP075113.1 Protein Homology CDS 2485444 2486985 . - 0 ID=cds-WP_001235489.1;Parent=gene-CCO47_RS12105;Dbxref=GenBank:WP_001235489.1;Name=WP_001235489.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460641.1;locus_tag=CCO47_RS12105;product=transcriptional regulator TyrR;protein_id=WP_001235489.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2487133 2488194 . - . ID=gene-CCO47_RS12110;Name=CCO47_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12110;old_locus_tag=CCO47_12110 NZ_CP075113.1 Protein Homology CDS 2487133 2488194 . - 0 ID=cds-WP_001294464.1;Parent=gene-CCO47_RS12110;Dbxref=GenBank:WP_001294464.1;Name=WP_001294464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=CCO47_RS12110;product=YcjF family protein;protein_id=WP_001294464.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2488191 2489588 . - . ID=gene-CCO47_RS12115;Name=CCO47_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12115;old_locus_tag=CCO47_12115 NZ_CP075113.1 Protein Homology CDS 2488191 2489588 . - 0 ID=cds-WP_000825860.1;Parent=gene-CCO47_RS12115;Dbxref=GenBank:WP_000825860.1;Name=WP_000825860.1;Ontology_term=GO:0003924,GO:0005525,GO:0019003;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,GDP binding|0019003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=CCO47_RS12115;product=YcjX family GTP-binding protein;protein_id=WP_000825860.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2489737 2490051 . - . ID=gene-CCO47_RS12120;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=CCO47_RS12120;old_locus_tag=CCO47_12120 NZ_CP075113.1 Protein Homology CDS 2489737 2490051 . - 0 ID=cds-WP_000913432.1;Parent=gene-CCO47_RS12120;Dbxref=GenBank:WP_000913432.1;Name=WP_000913432.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460644.1;locus_tag=CCO47_RS12120;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000913432.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2490127 2490345 . - . ID=gene-CCO47_RS12125;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=CCO47_RS12125;old_locus_tag=CCO47_12125 NZ_CP075113.1 Protein Homology CDS 2490127 2490345 . - 0 ID=cds-WP_001097610.1;Parent=gene-CCO47_RS12125;Dbxref=GenBank:WP_001097610.1;Name=WP_001097610.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460645.1;locus_tag=CCO47_RS12125;product=phage shock protein PspD;protein_id=WP_001097610.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2490368 2490727 . - . ID=gene-CCO47_RS12130;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=CCO47_RS12130;old_locus_tag=CCO47_12130 NZ_CP075113.1 Protein Homology CDS 2490368 2490727 . - 0 ID=cds-WP_000508938.1;Parent=gene-CCO47_RS12130;Dbxref=GenBank:WP_000508938.1;Name=WP_000508938.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460646.1;locus_tag=CCO47_RS12130;product=envelope stress response membrane protein PspC;protein_id=WP_000508938.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2490727 2490951 . - . ID=gene-CCO47_RS12135;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=CCO47_RS12135;old_locus_tag=CCO47_12135 NZ_CP075113.1 Protein Homology CDS 2490727 2490951 . - 0 ID=cds-WP_001274953.1;Parent=gene-CCO47_RS12135;Dbxref=GenBank:WP_001274953.1;Name=WP_001274953.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460647.1;locus_tag=CCO47_RS12135;product=envelope stress response membrane protein PspB;protein_id=WP_001274953.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2491011 2491679 . - . ID=gene-CCO47_RS12140;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=CCO47_RS12140;old_locus_tag=CCO47_12140 NZ_CP075113.1 Protein Homology CDS 2491011 2491679 . - 0 ID=cds-WP_000511010.1;Parent=gene-CCO47_RS12140;Dbxref=GenBank:WP_000511010.1;Name=WP_000511010.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460648.1;locus_tag=CCO47_RS12140;product=phage shock protein PspA;protein_id=WP_000511010.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2491850 2492830 . + . ID=gene-CCO47_RS12145;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=CCO47_RS12145;old_locus_tag=CCO47_12145 NZ_CP075113.1 Protein Homology CDS 2491850 2492830 . + 0 ID=cds-WP_001675625.1;Parent=gene-CCO47_RS12145;Dbxref=GenBank:WP_001675625.1;Name=WP_001675625.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460649.1;locus_tag=CCO47_RS12145;product=phage shock protein operon transcriptional activator;protein_id=WP_001675625.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2492942 2494591 . + . ID=gene-CCO47_RS12150;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=CCO47_RS12150;old_locus_tag=CCO47_12150 NZ_CP075113.1 Protein Homology CDS 2492942 2494591 . + 0 ID=cds-WP_001241620.1;Parent=gene-CCO47_RS12150;Dbxref=GenBank:WP_001241620.1;Name=WP_001241620.1;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=CCO47_RS12150;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WP_001241620.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2494588 2495553 . + . ID=gene-CCO47_RS12155;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=CCO47_RS12155;old_locus_tag=CCO47_12155 NZ_CP075113.1 Protein Homology CDS 2494588 2495553 . + 0 ID=cds-WP_000583298.1;Parent=gene-CCO47_RS12155;Dbxref=GenBank:WP_000583298.1;Name=WP_000583298.1;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=CCO47_RS12155;product=peptide ABC transporter permease SapB;protein_id=WP_000583298.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2495540 2496430 . + . ID=gene-CCO47_RS12160;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=CCO47_RS12160;old_locus_tag=CCO47_12160 NZ_CP075113.1 Protein Homology CDS 2495540 2496430 . + 0 ID=cds-WP_001146149.1;Parent=gene-CCO47_RS12160;Dbxref=GenBank:WP_001146149.1;Name=WP_001146149.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460652.1;locus_tag=CCO47_RS12160;product=peptide ABC transporter permease SapC;protein_id=WP_001146149.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2496430 2497422 . + . ID=gene-CCO47_RS12165;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=CCO47_RS12165;old_locus_tag=CCO47_12165 NZ_CP075113.1 Protein Homology CDS 2496430 2497422 . + 0 ID=cds-WP_001128871.1;Parent=gene-CCO47_RS12165;Dbxref=GenBank:WP_001128871.1;Name=WP_001128871.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460653.1;locus_tag=CCO47_RS12165;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_001128871.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2497424 2498230 . + . ID=gene-CCO47_RS12170;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=CCO47_RS12170;old_locus_tag=CCO47_12170 NZ_CP075113.1 Protein Homology CDS 2497424 2498230 . + 0 ID=cds-WP_000230462.1;Parent=gene-CCO47_RS12170;Dbxref=GenBank:WP_000230462.1;Name=WP_000230462.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=CCO47_RS12170;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_000230462.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2498246 2498953 . - . ID=gene-CCO47_RS12175;Name=CCO47_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12175;old_locus_tag=CCO47_12175 NZ_CP075113.1 Protein Homology CDS 2498246 2498953 . - 0 ID=cds-WP_001268403.1;Parent=gene-CCO47_RS12175;Dbxref=GenBank:WP_001268403.1;Name=WP_001268403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748430.1;locus_tag=CCO47_RS12175;product=EAL domain-containing protein;protein_id=WP_001268403.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2499420 2500793 . - . ID=gene-CCO47_RS12180;Name=steC;gbkey=Gene;gene=steC;gene_biotype=protein_coding;locus_tag=CCO47_RS12180;old_locus_tag=CCO47_12180 NZ_CP075113.1 Protein Homology CDS 2499420 2500793 . - 0 ID=cds-WP_001116914.1;Parent=gene-CCO47_RS12180;Dbxref=GenBank:WP_001116914.1;Name=WP_001116914.1;gbkey=CDS;gene=steC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460656.1;locus_tag=CCO47_RS12180;product=SPI-2 type III secretion system effector kinase SteC;protein_id=WP_001116914.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2500828 2501007 . + . ID=gene-CCO47_RS12185;Name=CCO47_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12185;old_locus_tag=CCO47_12185 NZ_CP075113.1 Protein Homology CDS 2500828 2501007 . + 0 ID=cds-WP_001535215.1;Parent=gene-CCO47_RS12185;Dbxref=GenBank:WP_001535215.1;Name=WP_001535215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460657.1;locus_tag=CCO47_RS12185;product=hypothetical protein;protein_id=WP_001535215.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2500982 2501280 . + . ID=gene-CCO47_RS24170;Name=CCO47_RS24170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24170;pseudo=true NZ_CP075113.1 Protein Homology CDS 2500982 2501280 . + 0 ID=cds-CCO47_RS24170;Parent=gene-CCO47_RS24170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=CCO47_RS24170;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2501398 2502186 . + . ID=gene-CCO47_RS12190;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=CCO47_RS12190;old_locus_tag=CCO47_12190 NZ_CP075113.1 Protein Homology CDS 2501398 2502186 . + 0 ID=cds-WP_000506501.1;Parent=gene-CCO47_RS12190;Dbxref=GenBank:WP_000506501.1;Name=WP_000506501.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=CCO47_RS12190;product=enoyl-ACP reductase FabI;protein_id=WP_000506501.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2502386 2503363 . + . ID=gene-CCO47_RS12195;Name=CCO47_RS12195;end_range=2503363,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS12195;old_locus_tag=CCO47_12195;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 2502386 2503363 . + 0 ID=cds-CCO47_RS12195;Parent=gene-CCO47_RS12195;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2503363,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460660.1;locus_tag=CCO47_RS12195;partial=true;product=carboxymuconolactone decarboxylase family protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2503608 2505542 . + . ID=gene-CCO47_RS12200;Name=CCO47_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12200;old_locus_tag=CCO47_12200 NZ_CP075113.1 Protein Homology CDS 2503608 2505542 . + 0 ID=cds-WP_000485050.1;Parent=gene-CCO47_RS12200;Dbxref=GenBank:WP_000485050.1;Name=WP_000485050.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=CCO47_RS12200;product=exoribonuclease II;protein_id=WP_000485050.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2505804 2507786 . + . ID=gene-CCO47_RS12205;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=CCO47_RS12205;old_locus_tag=CCO47_12205 NZ_CP075113.1 Protein Homology CDS 2505804 2507786 . + 0 ID=cds-WP_001675620.1;Parent=gene-CCO47_RS12205;Dbxref=GenBank:WP_001675620.1;Name=WP_001675620.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=CCO47_RS12205;product=cyclic di-GMP phosphodiesterase;protein_id=WP_001675620.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2507908 2508087 . + . ID=gene-CCO47_RS12210;Name=CCO47_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12210;old_locus_tag=CCO47_12210 NZ_CP075113.1 Protein Homology CDS 2507908 2508087 . + 0 ID=cds-WP_001279854.1;Parent=gene-CCO47_RS12210;Dbxref=GenBank:WP_001279854.1;Name=WP_001279854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=CCO47_RS12210;product=YciZ family protein;protein_id=WP_001279854.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2508174 2508926 . + . ID=gene-CCO47_RS12215;Name=yciT;gbkey=Gene;gene=yciT;gene_biotype=protein_coding;gene_synonym=deoT;locus_tag=CCO47_RS12215;old_locus_tag=CCO47_12215 NZ_CP075113.1 Protein Homology CDS 2508174 2508926 . + 0 ID=cds-WP_001088593.1;Parent=gene-CCO47_RS12215;Dbxref=GenBank:WP_001088593.1;Name=WP_001088593.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yciT;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460663.1;locus_tag=CCO47_RS12215;product=DNA-binding transcriptional regulator YciT;protein_id=WP_001088593.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2509185 2509403 . + . ID=gene-CCO47_RS12220;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=CCO47_RS12220;old_locus_tag=CCO47_12220 NZ_CP075113.1 Protein Homology CDS 2509185 2509403 . + 0 ID=cds-WP_000481166.1;Parent=gene-CCO47_RS12220;Dbxref=GenBank:WP_000481166.1;Name=WP_000481166.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=CCO47_RS12220;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_000481166.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2509523 2509849 . - . ID=gene-CCO47_RS12225;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=CCO47_RS12225;old_locus_tag=CCO47_12225 NZ_CP075113.1 Protein Homology CDS 2509523 2509849 . - 0 ID=cds-WP_001285199.1;Parent=gene-CCO47_RS12225;Dbxref=GenBank:WP_001285199.1;Name=WP_001285199.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460665.1;locus_tag=CCO47_RS12225;product=stress response translation initiation inhibitor YciH;protein_id=WP_001285199.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2509849 2510586 . - . ID=gene-CCO47_RS12230;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=CCO47_RS12230;old_locus_tag=CCO47_12230 NZ_CP075113.1 Protein Homology CDS 2509849 2510586 . - 0 ID=cds-WP_001675160.1;Parent=gene-CCO47_RS12230;Dbxref=GenBank:WP_001675160.1;Name=WP_001675160.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460666.1;locus_tag=CCO47_RS12230;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_001675160.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2510777 2511946 . - . ID=gene-CCO47_RS12235;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=CCO47_RS12235;old_locus_tag=CCO47_12235 NZ_CP075113.1 Protein Homology CDS 2510777 2511946 . - 0 ID=cds-WP_000891378.1;Parent=gene-CCO47_RS12235;Dbxref=GenBank:WP_000891378.1;Name=WP_000891378.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=CCO47_RS12235;product=lipopolysaccharide assembly protein LapB;protein_id=WP_000891378.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2511953 2512261 . - . ID=gene-CCO47_RS12240;Name=CCO47_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12240;old_locus_tag=CCO47_12240 NZ_CP075113.1 Protein Homology CDS 2511953 2512261 . - 0 ID=cds-WP_000876301.1;Parent=gene-CCO47_RS12240;Dbxref=GenBank:WP_000876301.1;Name=WP_000876301.1;Ontology_term=GO:0008653,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460668.1;locus_tag=CCO47_RS12240;product=LapA family protein;protein_id=WP_000876301.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2512411 2513175 . - . ID=gene-CCO47_RS12245;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=CCO47_RS12245;old_locus_tag=CCO47_12245 NZ_CP075113.1 Protein Homology CDS 2512411 2513175 . - 0 ID=cds-WP_000948651.1;Parent=gene-CCO47_RS12245;Dbxref=GenBank:WP_000948651.1;Name=WP_000948651.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460669.1;locus_tag=CCO47_RS12245;product=phosphatidylglycerophosphatase B;protein_id=WP_000948651.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2513371 2513961 . + . ID=gene-CCO47_RS12250;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=CCO47_RS12250;old_locus_tag=CCO47_12250 NZ_CP075113.1 Protein Homology CDS 2513371 2513961 . + 0 ID=cds-WP_001675619.1;Parent=gene-CCO47_RS12250;Dbxref=GenBank:WP_001675619.1;Name=WP_001675619.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460670.1;locus_tag=CCO47_RS12250;product=GTP cyclohydrolase II;protein_id=WP_001675619.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2514017 2516692 . - . ID=gene-CCO47_RS12255;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=CCO47_RS12255;old_locus_tag=CCO47_12255 NZ_CP075113.1 Protein Homology CDS 2514017 2516692 . - 0 ID=cds-WP_000099470.1;Parent=gene-CCO47_RS12255;Dbxref=GenBank:WP_000099470.1;Name=WP_000099470.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=CCO47_RS12255;product=aconitate hydratase AcnA;protein_id=WP_000099470.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2516875 2516967 . - . ID=gene-CCO47_RS24175;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=CCO47_RS24175 NZ_CP075113.1 Protein Homology CDS 2516875 2516967 . - 0 ID=cds-WP_223148964.1;Parent=gene-CCO47_RS24175;Dbxref=GenBank:WP_223148964.1;Name=WP_223148964.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_226998799.1;locus_tag=CCO47_RS24175;product=small membrane protein YmiC;protein_id=WP_223148964.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2517077 2517247 . - . ID=gene-CCO47_RS12260;Name=CCO47_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12260;old_locus_tag=CCO47_12260 NZ_CP075113.1 Protein Homology CDS 2517077 2517247 . - 0 ID=cds-WP_000026198.1;Parent=gene-CCO47_RS12260;Dbxref=GenBank:WP_000026198.1;Name=WP_000026198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000029022.1;locus_tag=CCO47_RS12260;product=YciX family protein;protein_id=WP_000026198.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2517248 2517388 . - . ID=gene-CCO47_RS12265;Name=CCO47_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12265;old_locus_tag=CCO47_12265 NZ_CP075113.1 Protein Homology CDS 2517248 2517388 . - 0 ID=cds-WP_213083417.1;Parent=gene-CCO47_RS12265;Dbxref=GenBank:WP_213083417.1;Name=WP_213083417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=CCO47_RS12265;product=YmiA family putative membrane protein;protein_id=WP_213083417.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2517669 2518643 . - . ID=gene-CCO47_RS12270;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=CCO47_RS12270;old_locus_tag=CCO47_12270 NZ_CP075113.1 Protein Homology CDS 2517669 2518643 . - 0 ID=cds-WP_000776225.1;Parent=gene-CCO47_RS12270;Dbxref=GenBank:WP_000776225.1;Name=WP_000776225.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=CCO47_RS12270;product=HTH-type transcriptional regulator CysB;protein_id=WP_000776225.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2519054 2521651 . - . ID=gene-CCO47_RS12275;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=CCO47_RS12275;old_locus_tag=CCO47_12275 NZ_CP075113.1 Protein Homology CDS 2519054 2521651 . - 0 ID=cds-WP_000513597.1;Parent=gene-CCO47_RS12275;Dbxref=GenBank:WP_000513597.1;Name=WP_000513597.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=CCO47_RS12275;product=type I DNA topoisomerase;protein_id=WP_000513597.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2522054 2522305 . + . ID=gene-CCO47_RS12280;Name=CCO47_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12280;old_locus_tag=CCO47_12280 NZ_CP075113.1 Protein Homology CDS 2522054 2522305 . + 0 ID=cds-WP_000548616.1;Parent=gene-CCO47_RS12280;Dbxref=GenBank:WP_000548616.1;Name=WP_000548616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460674.1;locus_tag=CCO47_RS12280;product=YciN family protein;protein_id=WP_000548616.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2522347 2523393 . - . ID=gene-CCO47_RS12285;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=CCO47_RS12285;old_locus_tag=CCO47_12285 NZ_CP075113.1 Protein Homology CDS 2522347 2523393 . - 0 ID=cds-WP_000422082.1;Parent=gene-CCO47_RS12285;Dbxref=GenBank:WP_000422082.1;Name=WP_000422082.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460675.1;locus_tag=CCO47_RS12285;product=protease SohB;protein_id=WP_000422082.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2523631 2524392 . + . ID=gene-CCO47_RS12290;Name=CCO47_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12290;old_locus_tag=CCO47_12290 NZ_CP075113.1 Protein Homology CDS 2523631 2524392 . + 0 ID=cds-WP_000559310.1;Parent=gene-CCO47_RS12290;Dbxref=GenBank:WP_000559310.1;Name=WP_000559310.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460676.1;locus_tag=CCO47_RS12290;product=YciK family oxidoreductase;protein_id=WP_000559310.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2524389 2524979 . + . ID=gene-CCO47_RS12295;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=CCO47_RS12295;old_locus_tag=CCO47_12295 NZ_CP075113.1 Protein Homology CDS 2524389 2524979 . + 0 ID=cds-WP_001278856.1;Parent=gene-CCO47_RS12295;Dbxref=GenBank:WP_001278856.1;Name=WP_001278856.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460677.1;locus_tag=CCO47_RS12295;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_001278856.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2525066 2525941 . - . ID=gene-CCO47_RS12300;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=CCO47_RS12300;old_locus_tag=CCO47_12300 NZ_CP075113.1 Protein Homology CDS 2525066 2525941 . - 0 ID=cds-WP_001291233.1;Parent=gene-CCO47_RS12300;Dbxref=GenBank:WP_001291233.1;Name=WP_001291233.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=CCO47_RS12300;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001291233.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2526042 2526662 . - . ID=gene-CCO47_RS12305;Name=CCO47_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12305;old_locus_tag=CCO47_12305 NZ_CP075113.1 Protein Homology CDS 2526042 2526662 . - 0 ID=cds-WP_000077249.1;Parent=gene-CCO47_RS12305;Dbxref=GenBank:WP_000077249.1;Name=WP_000077249.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase activity|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=CCO47_RS12305;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_000077249.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2526670 2527551 . - . ID=gene-CCO47_RS12310;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=CCO47_RS12310;old_locus_tag=CCO47_12310 NZ_CP075113.1 Protein Homology CDS 2526670 2527551 . - 0 ID=cds-WP_000500446.1;Parent=gene-CCO47_RS12310;Dbxref=GenBank:WP_000500446.1;Name=WP_000500446.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460680.1;locus_tag=CCO47_RS12310;product=RNase RNM;protein_id=WP_000500446.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2527673 2527717 . + . ID=gene-CCO47_RS12315;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=CCO47_RS12315;old_locus_tag=CCO47_12315 NZ_CP075113.1 Protein Homology CDS 2527673 2527717 . + 0 ID=cds-WP_010989026.1;Parent=gene-CCO47_RS12315;Dbxref=GenBank:WP_010989026.1;Name=WP_010989026.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=CCO47_RS12315;product=trp operon leader peptide;protein_id=WP_010989026.1;transl_table=11 NZ_CP075113.1 cmsearch sequence_feature 2527694 2527789 . + . ID=id-NZ_CP075113.1:2527694..2527789;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_CP075113.1 RefSeq gene 2527812 2529374 . + . ID=gene-CCO47_RS12320;Name=CCO47_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12320;old_locus_tag=CCO47_12320 NZ_CP075113.1 Protein Homology CDS 2527812 2529374 . + 0 ID=cds-WP_001194386.1;Parent=gene-CCO47_RS12320;Dbxref=GenBank:WP_001194386.1;Name=WP_001194386.1;Ontology_term=GO:0009058,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460682.1;locus_tag=CCO47_RS12320;product=anthranilate synthase component 1;protein_id=WP_001194386.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2529374 2530969 . + . ID=gene-CCO47_RS12325;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=CCO47_RS12325;old_locus_tag=CCO47_12325 NZ_CP075113.1 Protein Homology CDS 2529374 2530969 . + 0 ID=cds-WP_000763488.1;Parent=gene-CCO47_RS12325;Dbxref=GenBank:WP_000763488.1;Name=WP_000763488.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=CCO47_RS12325;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_000763488.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2530973 2532331 . + . ID=gene-CCO47_RS12330;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=CCO47_RS12330;old_locus_tag=CCO47_12330 NZ_CP075113.1 Protein Homology CDS 2530973 2532331 . + 0 ID=cds-WP_001195280.1;Parent=gene-CCO47_RS12330;Dbxref=GenBank:WP_001195280.1;Name=WP_001195280.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=CCO47_RS12330;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_001195280.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2532341 2533534 . + . ID=gene-CCO47_RS12335;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=CCO47_RS12335;old_locus_tag=CCO47_12335 NZ_CP075113.1 Protein Homology CDS 2532341 2533534 . + 0 ID=cds-WP_000209485.1;Parent=gene-CCO47_RS12335;Dbxref=GenBank:WP_000209485.1;Name=WP_000209485.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460685.1;locus_tag=CCO47_RS12335;product=tryptophan synthase subunit beta;protein_id=WP_000209485.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2533534 2534340 . + . ID=gene-CCO47_RS12340;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=CCO47_RS12340;old_locus_tag=CCO47_12340 NZ_CP075113.1 Protein Homology CDS 2533534 2534340 . + 0 ID=cds-WP_000443029.1;Parent=gene-CCO47_RS12340;Dbxref=GenBank:WP_000443029.1;Name=WP_000443029.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460686.1;locus_tag=CCO47_RS12340;product=tryptophan synthase subunit alpha;protein_id=WP_000443029.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2534820 2535002 . + . ID=gene-CCO47_RS12345;Name=CCO47_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12345;old_locus_tag=CCO47_12345 NZ_CP075113.1 Protein Homology CDS 2534820 2535002 . + 0 ID=cds-WP_000807657.1;Parent=gene-CCO47_RS12345;Dbxref=GenBank:WP_000807657.1;Name=WP_000807657.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460687.1;locus_tag=CCO47_RS12345;product=con-10 family general stress protein;protein_id=WP_000807657.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2535092 2535595 . + . ID=gene-CCO47_RS12350;Name=CCO47_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12350;old_locus_tag=CCO47_12350 NZ_CP075113.1 Protein Homology CDS 2535092 2535595 . + 0 ID=cds-WP_001022826.1;Parent=gene-CCO47_RS12350;Dbxref=GenBank:WP_001022826.1;Name=WP_001022826.1;Ontology_term=GO:0004322,GO:0005506,GO:0046872;gbkey=CDS;go_function=ferroxidase activity|0004322||IEA,iron ion binding|0005506||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460688.1;locus_tag=CCO47_RS12350;product=YciE/YciF ferroxidase family protein;protein_id=WP_001022826.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2535669 2536175 . + . ID=gene-CCO47_RS12355;Name=CCO47_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12355;old_locus_tag=CCO47_12355 NZ_CP075113.1 Protein Homology CDS 2535669 2536175 . + 0 ID=cds-WP_001109977.1;Parent=gene-CCO47_RS12355;Dbxref=GenBank:WP_001109977.1;Name=WP_001109977.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460689.1;locus_tag=CCO47_RS12355;product=ferritin-like domain-containing protein;protein_id=WP_001109977.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2536195 2537073 . + . ID=gene-CCO47_RS12360;Name=CCO47_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12360;old_locus_tag=CCO47_12360 NZ_CP075113.1 Protein Homology CDS 2536195 2537073 . + 0 ID=cds-WP_000488349.1;Parent=gene-CCO47_RS12360;Dbxref=GenBank:WP_000488349.1;Name=WP_000488349.1;Ontology_term=GO:0004096,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460690.1;locus_tag=CCO47_RS12360;product=manganese catalase family protein;protein_id=WP_000488349.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2537155 2537793 . - . ID=gene-CCO47_RS12365;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=CCO47_RS12365;old_locus_tag=CCO47_12365 NZ_CP075113.1 Protein Homology CDS 2537155 2537793 . - 0 ID=cds-WP_000714799.1;Parent=gene-CCO47_RS12365;Dbxref=GenBank:WP_000714799.1;Name=WP_000714799.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460691.1;locus_tag=CCO47_RS12365;product=outer membrane protein OmpW;protein_id=WP_000714799.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2538131 2538535 . + . ID=gene-CCO47_RS12370;Name=CCO47_RS12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12370;old_locus_tag=CCO47_12370 NZ_CP075113.1 Protein Homology CDS 2538131 2538535 . + 0 ID=cds-WP_000114955.1;Parent=gene-CCO47_RS12370;Dbxref=GenBank:WP_000114955.1;Name=WP_000114955.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=CCO47_RS12370;product=YkgJ family cysteine cluster protein;protein_id=WP_000114955.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2538561 2539304 . + . ID=gene-CCO47_RS12375;Name=CCO47_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12375;old_locus_tag=CCO47_12375 NZ_CP075113.1 Protein Homology CDS 2538561 2539304 . + 0 ID=cds-WP_000028507.1;Parent=gene-CCO47_RS12375;Dbxref=GenBank:WP_000028507.1;Name=WP_000028507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=CCO47_RS12375;product=YciC family protein;protein_id=WP_000028507.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2539361 2539900 . + . ID=gene-CCO47_RS12380;Name=CCO47_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12380;old_locus_tag=CCO47_12380 NZ_CP075113.1 Protein Homology CDS 2539361 2539900 . + 0 ID=cds-WP_000808683.1;Parent=gene-CCO47_RS12380;Dbxref=GenBank:WP_000808683.1;Name=WP_000808683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460694.1;locus_tag=CCO47_RS12380;product=septation protein A;protein_id=WP_000808683.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2540061 2540462 . + . ID=gene-CCO47_RS12385;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=CCO47_RS12385;old_locus_tag=CCO47_12385 NZ_CP075113.1 Protein Homology CDS 2540061 2540462 . + 0 ID=cds-WP_000210317.1;Parent=gene-CCO47_RS12385;Dbxref=GenBank:WP_000210317.1;Name=WP_000210317.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460695.1;locus_tag=CCO47_RS12385;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000210317.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2540522 2541250 . - . ID=gene-CCO47_RS12390;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=CCO47_RS12390;old_locus_tag=CCO47_12390 NZ_CP075113.1 Protein Homology CDS 2540522 2541250 . - 0 ID=cds-WP_001675661.1;Parent=gene-CCO47_RS12390;Dbxref=GenBank:WP_001675661.1;Name=WP_001675661.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=CCO47_RS12390;product=TonB system transport protein TonB;protein_id=WP_001675661.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2541474 2541770 . + . ID=gene-CCO47_RS12395;Name=CCO47_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12395;old_locus_tag=CCO47_12395 NZ_CP075113.1 Protein Homology CDS 2541474 2541770 . + 0 ID=cds-WP_000967605.1;Parent=gene-CCO47_RS12395;Dbxref=GenBank:WP_000967605.1;Name=WP_000967605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460697.1;locus_tag=CCO47_RS12395;product=YciI family protein;protein_id=WP_000967605.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2541814 2541987 . - . ID=gene-CCO47_RS12400;Name=CCO47_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12400;old_locus_tag=CCO47_12400 NZ_CP075113.1 Protein Homology CDS 2541814 2541987 . - 0 ID=cds-WP_001531561.1;Parent=gene-CCO47_RS12400;Dbxref=GenBank:WP_001531561.1;Name=WP_001531561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=CCO47_RS12400;product=YciY family protein;protein_id=WP_001531561.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2542130 2543590 . + . ID=gene-CCO47_RS12405;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=CCO47_RS12405;old_locus_tag=CCO47_12405 NZ_CP075113.1 Protein Homology CDS 2542130 2543590 . + 0 ID=cds-WP_000206886.1;Parent=gene-CCO47_RS12405;Dbxref=GenBank:WP_000206886.1;Name=WP_000206886.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=CCO47_RS12405;product=cardiolipin synthase;protein_id=WP_000206886.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2543624 2543953 . + . ID=gene-CCO47_RS12410;Name=CCO47_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12410;old_locus_tag=CCO47_12410 NZ_CP075113.1 Protein Homology CDS 2543624 2543953 . + 0 ID=cds-WP_000425070.1;Parent=gene-CCO47_RS12410;Dbxref=GenBank:WP_000425070.1;Name=WP_000425070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448158.1;locus_tag=CCO47_RS12410;product=HI1450 family dsDNA-mimic protein;protein_id=WP_000425070.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2544001 2544837 . - . ID=gene-CCO47_RS12415;Name=CCO47_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12415;old_locus_tag=CCO47_12415 NZ_CP075113.1 Protein Homology CDS 2544001 2544837 . - 0 ID=cds-WP_000059074.1;Parent=gene-CCO47_RS12415;Dbxref=GenBank:WP_000059074.1;Name=WP_000059074.1;Ontology_term=GO:0034220,GO:0005216,GO:0005267;gbkey=CDS;go_function=monoatomic ion channel activity|0005216||IEA,potassium channel activity|0005267||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460700.1;locus_tag=CCO47_RS12415;product=ion transporter;protein_id=WP_000059074.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2544885 2545889 . - . ID=gene-CCO47_RS12420;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=CCO47_RS12420;old_locus_tag=CCO47_12420 NZ_CP075113.1 Protein Homology CDS 2544885 2545889 . - 0 ID=cds-WP_000994698.1;Parent=gene-CCO47_RS12420;Dbxref=GenBank:WP_000994698.1;Name=WP_000994698.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=CCO47_RS12420;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_000994698.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2545886 2546893 . - . ID=gene-CCO47_RS12425;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=CCO47_RS12425;old_locus_tag=CCO47_12425 NZ_CP075113.1 Protein Homology CDS 2545886 2546893 . - 0 ID=cds-WP_000058854.1;Parent=gene-CCO47_RS12425;Dbxref=GenBank:WP_000058854.1;Name=WP_000058854.1;gbkey=CDS;gene=oppD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460702.1;locus_tag=CCO47_RS12425;product=ABC transporter ATP-binding protein;protein_id=WP_000058854.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2546905 2547813 . - . ID=gene-CCO47_RS12430;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=CCO47_RS12430;old_locus_tag=CCO47_12430 NZ_CP075113.1 Protein Homology CDS 2546905 2547813 . - 0 ID=cds-WP_000979653.1;Parent=gene-CCO47_RS12430;Dbxref=GenBank:WP_000979653.1;Name=WP_000979653.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=CCO47_RS12430;product=oligopeptide ABC transporter permease OppC;protein_id=WP_000979653.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2547828 2548748 . - . ID=gene-CCO47_RS12435;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=CCO47_RS12435;old_locus_tag=CCO47_12435 NZ_CP075113.1 Protein Homology CDS 2547828 2548748 . - 0 ID=cds-WP_000911097.1;Parent=gene-CCO47_RS12435;Dbxref=GenBank:WP_000911097.1;Name=WP_000911097.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=CCO47_RS12435;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911097.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2548870 2550501 . - . ID=gene-CCO47_RS12440;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=CCO47_RS12440;old_locus_tag=CCO47_12440 NZ_CP075113.1 Protein Homology CDS 2548870 2550501 . - 0 ID=cds-WP_001676097.1;Parent=gene-CCO47_RS12440;Dbxref=GenBank:WP_001676097.1;Name=WP_001676097.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675662.1;locus_tag=CCO47_RS12440;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_001676097.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2551265 2551912 . - . ID=gene-CCO47_RS12445;Name=CCO47_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12445;old_locus_tag=CCO47_12445 NZ_CP075113.1 Protein Homology CDS 2551265 2551912 . - 0 ID=cds-WP_000615840.1;Parent=gene-CCO47_RS12445;Dbxref=GenBank:WP_000615840.1;Name=WP_000615840.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460707.1;locus_tag=CCO47_RS12445;product=YchE family NAAT transporter;protein_id=WP_000615840.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2552389 2555067 . + . ID=gene-CCO47_RS12450;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=CCO47_RS12450;old_locus_tag=CCO47_12450 NZ_CP075113.1 Protein Homology CDS 2552389 2555067 . + 0 ID=cds-WP_000301678.1;Parent=gene-CCO47_RS12450;Dbxref=GenBank:WP_000301678.1;Name=WP_000301678.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=CCO47_RS12450;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_000301678.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2555264 2555881 . - . ID=gene-CCO47_RS12455;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=CCO47_RS12455;old_locus_tag=CCO47_12455 NZ_CP075113.1 Protein Homology CDS 2555264 2555881 . - 0 ID=cds-WP_000068095.1;Parent=gene-CCO47_RS12455;Dbxref=GenBank:WP_000068095.1;Name=WP_000068095.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460709.1;locus_tag=CCO47_RS12455;product=thymidine kinase;protein_id=WP_000068095.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2556544 2556957 . + . ID=gene-CCO47_RS12460;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=CCO47_RS12460;old_locus_tag=CCO47_12460 NZ_CP075113.1 Protein Homology CDS 2556544 2556957 . + 0 ID=cds-WP_001287383.1;Parent=gene-CCO47_RS12460;Dbxref=GenBank:WP_001287383.1;Name=WP_001287383.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460710.1;locus_tag=CCO47_RS12460;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_001287383.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2557089 2557997 . - . ID=gene-CCO47_RS12465;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=CCO47_RS12465;old_locus_tag=CCO47_12465 NZ_CP075113.1 Protein Homology CDS 2557089 2557997 . - 0 ID=cds-WP_000729450.1;Parent=gene-CCO47_RS12465;Dbxref=GenBank:WP_000729450.1;Name=WP_000729450.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460711.1;locus_tag=CCO47_RS12465;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000729450.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2558200 2559213 . - . ID=gene-CCO47_RS12470;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=CCO47_RS12470;old_locus_tag=CCO47_12470 NZ_CP075113.1 Protein Homology CDS 2558200 2559213 . - 0 ID=cds-WP_000193429.1;Parent=gene-CCO47_RS12470;Dbxref=GenBank:WP_000193429.1;Name=WP_000193429.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460712.1;locus_tag=CCO47_RS12470;product=two-component system response regulator RssB;protein_id=WP_000193429.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2559304 2560209 . - . ID=gene-CCO47_RS12475;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=CCO47_RS12475;old_locus_tag=CCO47_12475 NZ_CP075113.1 Protein Homology CDS 2559304 2560209 . - 0 ID=cds-WP_001230575.1;Parent=gene-CCO47_RS12475;Dbxref=GenBank:WP_001230575.1;Name=WP_001230575.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=phosphatidylcholine lysophospholipase A1 activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460713.1;locus_tag=CCO47_RS12475;product=patatin-like phospholipase RssA;protein_id=WP_001230575.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2560320 2560778 . + . ID=gene-CCO47_RS12480;Name=CCO47_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12480;old_locus_tag=CCO47_12480 NZ_CP075113.1 Protein Homology CDS 2560320 2560778 . + 0 ID=cds-WP_001540172.1;Parent=gene-CCO47_RS12480;Dbxref=GenBank:WP_001540172.1;Name=WP_001540172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460714.1;locus_tag=CCO47_RS12480;product=YchJ family protein;protein_id=WP_001540172.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2560829 2561671 . + . ID=gene-CCO47_RS12485;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=CCO47_RS12485;old_locus_tag=CCO47_12485 NZ_CP075113.1 Protein Homology CDS 2560829 2561671 . + 0 ID=cds-WP_001191156.1;Parent=gene-CCO47_RS12485;Dbxref=GenBank:WP_001191156.1;Name=WP_001191156.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460715.1;locus_tag=CCO47_RS12485;product=formyltetrahydrofolate deformylase;protein_id=WP_001191156.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2561841 2561981 . + . ID=gene-CCO47_RS12490;Name=CCO47_RS12490;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO47_RS12490;old_locus_tag=CCO47_12490 NZ_CP075113.1 cmsearch ncRNA 2561841 2561981 . + . ID=rna-CCO47_RS12490;Parent=gene-CCO47_RS12490;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS12490;product=RtT sRNA NZ_CP075113.1 cmsearch exon 2561841 2561981 . + . ID=exon-CCO47_RS12490-1;Parent=rna-CCO47_RS12490;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS12490;product=RtT sRNA NZ_CP075113.1 RefSeq gene 2562012 2562096 . + . ID=gene-CCO47_RS12495;Name=CCO47_RS12495;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS12495;old_locus_tag=CCO47_12495 NZ_CP075113.1 tRNAscan-SE tRNA 2562012 2562096 . + . ID=rna-CCO47_RS12495;Parent=gene-CCO47_RS12495;anticodon=(pos:2562046..2562048);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS12495;product=tRNA-Tyr NZ_CP075113.1 tRNAscan-SE exon 2562012 2562096 . + . ID=exon-CCO47_RS12495-1;Parent=rna-CCO47_RS12495;anticodon=(pos:2562046..2562048);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS12495;product=tRNA-Tyr NZ_CP075113.1 RefSeq gene 2562141 2562272 . + . ID=gene-CCO47_RS12500;Name=CCO47_RS12500;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO47_RS12500;old_locus_tag=CCO47_12500 NZ_CP075113.1 cmsearch ncRNA 2562141 2562272 . + . ID=rna-CCO47_RS12500;Parent=gene-CCO47_RS12500;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS12500;product=RtT sRNA NZ_CP075113.1 cmsearch exon 2562141 2562272 . + . ID=exon-CCO47_RS12500-1;Parent=rna-CCO47_RS12500;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS12500;product=RtT sRNA NZ_CP075113.1 RefSeq gene 2562307 2562391 . + . ID=gene-CCO47_RS12505;Name=CCO47_RS12505;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS12505;old_locus_tag=CCO47_12505 NZ_CP075113.1 tRNAscan-SE tRNA 2562307 2562391 . + . ID=rna-CCO47_RS12505;Parent=gene-CCO47_RS12505;anticodon=(pos:2562341..2562343);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS12505;product=tRNA-Tyr NZ_CP075113.1 tRNAscan-SE exon 2562307 2562391 . + . ID=exon-CCO47_RS12505-1;Parent=rna-CCO47_RS12505;anticodon=(pos:2562341..2562343);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS12505;product=tRNA-Tyr NZ_CP075113.1 RefSeq gene 2562435 2562566 . + . ID=gene-CCO47_RS12510;Name=CCO47_RS12510;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO47_RS12510;old_locus_tag=CCO47_12510 NZ_CP075113.1 cmsearch ncRNA 2562435 2562566 . + . ID=rna-CCO47_RS12510;Parent=gene-CCO47_RS12510;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS12510;product=RtT sRNA NZ_CP075113.1 cmsearch exon 2562435 2562566 . + . ID=exon-CCO47_RS12510-1;Parent=rna-CCO47_RS12510;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS12510;product=RtT sRNA NZ_CP075113.1 RefSeq gene 2562610 2562741 . + . ID=gene-CCO47_RS12515;Name=CCO47_RS12515;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO47_RS12515;old_locus_tag=CCO47_12515 NZ_CP075113.1 cmsearch ncRNA 2562610 2562741 . + . ID=rna-CCO47_RS12515;Parent=gene-CCO47_RS12515;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS12515;product=RtT sRNA NZ_CP075113.1 cmsearch exon 2562610 2562741 . + . ID=exon-CCO47_RS12515-1;Parent=rna-CCO47_RS12515;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS12515;product=RtT sRNA NZ_CP075113.1 RefSeq gene 2562785 2562915 . + . ID=gene-CCO47_RS12520;Name=CCO47_RS12520;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO47_RS12520;old_locus_tag=CCO47_12520 NZ_CP075113.1 cmsearch ncRNA 2562785 2562915 . + . ID=rna-CCO47_RS12520;Parent=gene-CCO47_RS12520;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS12520;product=RtT sRNA NZ_CP075113.1 cmsearch exon 2562785 2562915 . + . ID=exon-CCO47_RS12520-1;Parent=rna-CCO47_RS12520;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS12520;product=RtT sRNA NZ_CP075113.1 RefSeq gene 2562959 2563090 . + . ID=gene-CCO47_RS12525;Name=CCO47_RS12525;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO47_RS12525;old_locus_tag=CCO47_12525 NZ_CP075113.1 cmsearch ncRNA 2562959 2563090 . + . ID=rna-CCO47_RS12525;Parent=gene-CCO47_RS12525;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS12525;product=RtT sRNA NZ_CP075113.1 cmsearch exon 2562959 2563090 . + . ID=exon-CCO47_RS12525-1;Parent=rna-CCO47_RS12525;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS12525;product=RtT sRNA NZ_CP075113.1 RefSeq gene 2563193 2564722 . - . ID=gene-CCO47_RS12530;Name=CCO47_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12530;old_locus_tag=CCO47_12530 NZ_CP075113.1 Protein Homology CDS 2563193 2564722 . - 0 ID=cds-WP_001212720.1;Parent=gene-CCO47_RS12530;Dbxref=GenBank:WP_001212720.1;Name=WP_001212720.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460716.1;locus_tag=CCO47_RS12530;product=tetratricopeptide repeat protein;protein_id=WP_001212720.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2564964 2565641 . - . ID=gene-CCO47_RS12535;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=CCO47_RS12535;old_locus_tag=CCO47_12535 NZ_CP075113.1 Protein Homology CDS 2564964 2565641 . - 0 ID=cds-WP_000545594.1;Parent=gene-CCO47_RS12535;Dbxref=GenBank:WP_000545594.1;Name=WP_000545594.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460717.1;locus_tag=CCO47_RS12535;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000545594.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2565641 2566351 . - . ID=gene-CCO47_RS12540;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=CCO47_RS12540;old_locus_tag=CCO47_12540 NZ_CP075113.1 Protein Homology CDS 2565641 2566351 . - 0 ID=cds-WP_000571673.1;Parent=gene-CCO47_RS12540;Dbxref=GenBank:WP_000571673.1;Name=WP_000571673.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=CCO47_RS12540;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_000571673.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2566348 2567886 . - . ID=gene-CCO47_RS12545;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=CCO47_RS12545;old_locus_tag=CCO47_12545 NZ_CP075113.1 Protein Homology CDS 2566348 2567886 . - 0 ID=cds-WP_000702615.1;Parent=gene-CCO47_RS12545;Dbxref=GenBank:WP_000702615.1;Name=WP_000702615.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460719.1;locus_tag=CCO47_RS12545;product=nitrate reductase subunit beta;protein_id=WP_000702615.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2567883 2571626 . - . ID=gene-CCO47_RS12550;Name=CCO47_RS12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12550;old_locus_tag=CCO47_12550 NZ_CP075113.1 Protein Homology CDS 2567883 2571626 . - 0 ID=cds-WP_000033028.1;Parent=gene-CCO47_RS12550;Dbxref=GenBank:WP_000033028.1;Name=WP_000033028.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=CCO47_RS12550;product=nitrate reductase subunit alpha;protein_id=WP_000033028.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2572014 2573411 . - . ID=gene-CCO47_RS12555;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=CCO47_RS12555;old_locus_tag=CCO47_12555 NZ_CP075113.1 Protein Homology CDS 2572014 2573411 . - 0 ID=cds-WP_000019841.1;Parent=gene-CCO47_RS12555;Dbxref=GenBank:WP_000019841.1;Name=WP_000019841.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460721.1;locus_tag=CCO47_RS12555;product=nitrate transporter NarK;protein_id=WP_000019841.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2573752 2575548 . + . ID=gene-CCO47_RS12560;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=CCO47_RS12560;old_locus_tag=CCO47_12560 NZ_CP075113.1 Protein Homology CDS 2573752 2575548 . + 0 ID=cds-WP_000476244.1;Parent=gene-CCO47_RS12560;Dbxref=GenBank:WP_000476244.1;Name=WP_000476244.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=CCO47_RS12560;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_000476244.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2575541 2576191 . + . ID=gene-CCO47_RS12565;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=CCO47_RS12565;old_locus_tag=CCO47_12565 NZ_CP075113.1 Protein Homology CDS 2575541 2576191 . + 0 ID=cds-WP_001064598.1;Parent=gene-CCO47_RS12565;Dbxref=GenBank:WP_001064598.1;Name=WP_001064598.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460723.1;locus_tag=CCO47_RS12565;product=two-component system response regulator NarL;protein_id=WP_001064598.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2576192 2577616 . - . ID=gene-CCO47_RS12570;Name=CCO47_RS12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12570;old_locus_tag=CCO47_12570 NZ_CP075113.1 Protein Homology CDS 2576192 2577616 . - 0 ID=cds-WP_001116349.1;Parent=gene-CCO47_RS12570;Dbxref=GenBank:WP_001116349.1;Name=WP_001116349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=CCO47_RS12570;product=YchO/YchP family invasin;protein_id=WP_001116349.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2577793 2578146 . + . ID=gene-CCO47_RS12575;Name=CCO47_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12575;old_locus_tag=CCO47_12575 NZ_CP075113.1 Protein Homology CDS 2577793 2578146 . + 0 ID=cds-WP_001179794.1;Parent=gene-CCO47_RS12575;Dbxref=GenBank:WP_001179794.1;Name=WP_001179794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460725.1;locus_tag=CCO47_RS12575;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WP_001179794.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2578226 2578456 . - . ID=gene-CCO47_RS12580;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=CCO47_RS12580;old_locus_tag=CCO47_12580 NZ_CP075113.1 Protein Homology CDS 2578226 2578456 . - 0 ID=cds-WP_001674919.1;Parent=gene-CCO47_RS12580;Dbxref=GenBank:WP_001674919.1;Name=WP_001674919.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=CCO47_RS12580;product=putative cation transport regulator ChaB;protein_id=WP_001674919.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2578724 2579824 . + . ID=gene-CCO47_RS12585;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=CCO47_RS12585;old_locus_tag=CCO47_12585 NZ_CP075113.1 Protein Homology CDS 2578724 2579824 . + 0 ID=cds-WP_000148425.1;Parent=gene-CCO47_RS12585;Dbxref=GenBank:WP_000148425.1;Name=WP_000148425.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460727.1;locus_tag=CCO47_RS12585;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_000148425.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2579878 2580732 . - . ID=gene-CCO47_RS12590;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=CCO47_RS12590;old_locus_tag=CCO47_12590 NZ_CP075113.1 Protein Homology CDS 2579878 2580732 . - 0 ID=cds-WP_000811046.1;Parent=gene-CCO47_RS12590;Dbxref=GenBank:WP_000811046.1;Name=WP_000811046.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460728.1;locus_tag=CCO47_RS12590;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811046.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2580770 2581579 . - . ID=gene-CCO47_RS12595;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=CCO47_RS12595;old_locus_tag=CCO47_12595 NZ_CP075113.1 Protein Homology CDS 2580770 2581579 . - 0 ID=cds-WP_001257065.1;Parent=gene-CCO47_RS12595;Dbxref=GenBank:WP_001257065.1;Name=WP_001257065.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460729.1;locus_tag=CCO47_RS12595;product=invasion regulator SirB1;protein_id=WP_001257065.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2581583 2581972 . - . ID=gene-CCO47_RS12600;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=CCO47_RS12600;old_locus_tag=CCO47_12600 NZ_CP075113.1 Protein Homology CDS 2581583 2581972 . - 0 ID=cds-WP_000150667.1;Parent=gene-CCO47_RS12600;Dbxref=GenBank:WP_000150667.1;Name=WP_000150667.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460730.1;locus_tag=CCO47_RS12600;product=invasion regulator SirB2;protein_id=WP_000150667.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2581969 2582802 . - . ID=gene-CCO47_RS12605;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=CCO47_RS12605;old_locus_tag=CCO47_12605 NZ_CP075113.1 Protein Homology CDS 2581969 2582802 . - 0 ID=cds-WP_000347310.1;Parent=gene-CCO47_RS12605;Dbxref=GenBank:WP_000347310.1;Name=WP_000347310.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=CCO47_RS12605;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_000347310.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2582802 2583884 . - . ID=gene-CCO47_RS12610;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=CCO47_RS12610;old_locus_tag=CCO47_12610 NZ_CP075113.1 Protein Homology CDS 2582802 2583884 . - 0 ID=cds-WP_000804703.1;Parent=gene-CCO47_RS12610;Dbxref=GenBank:WP_000804703.1;Name=WP_000804703.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=CCO47_RS12610;product=peptide chain release factor 1;protein_id=WP_000804703.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2583925 2585181 . - . ID=gene-CCO47_RS12615;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=CCO47_RS12615;old_locus_tag=CCO47_12615 NZ_CP075113.1 Protein Homology CDS 2583925 2585181 . - 0 ID=cds-WP_000173208.1;Parent=gene-CCO47_RS12615;Dbxref=GenBank:WP_000173208.1;Name=WP_000173208.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=CCO47_RS12615;product=glutamyl-tRNA reductase;protein_id=WP_000173208.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2585495 2586118 . + . ID=gene-CCO47_RS12620;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=CCO47_RS12620;old_locus_tag=CCO47_12620 NZ_CP075113.1 Protein Homology CDS 2585495 2586118 . + 0 ID=cds-WP_000174484.1;Parent=gene-CCO47_RS12620;Dbxref=GenBank:WP_000174484.1;Name=WP_000174484.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460734.1;locus_tag=CCO47_RS12620;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_000174484.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2586115 2586966 . + . ID=gene-CCO47_RS12625;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=CCO47_RS12625;old_locus_tag=CCO47_12625 NZ_CP075113.1 Protein Homology CDS 2586115 2586966 . + 0 ID=cds-WP_000988260.1;Parent=gene-CCO47_RS12625;Dbxref=GenBank:WP_000988260.1;Name=WP_000988260.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460735.1;locus_tag=CCO47_RS12625;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_000988260.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2587232 2588179 . + . ID=gene-CCO47_RS12630;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=CCO47_RS12630;old_locus_tag=CCO47_12630 NZ_CP075113.1 Protein Homology CDS 2587232 2588179 . + 0 ID=cds-WP_001518537.1;Parent=gene-CCO47_RS12630;Dbxref=GenBank:WP_001518537.1;Name=WP_001518537.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=CCO47_RS12630;product=ribose-phosphate diphosphokinase;protein_id=WP_001518537.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2588304 2589989 . + . ID=gene-CCO47_RS12635;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=CCO47_RS12635;old_locus_tag=CCO47_12635 NZ_CP075113.1 Protein Homology CDS 2588304 2589989 . + 0 ID=cds-WP_001037190.1;Parent=gene-CCO47_RS12635;Dbxref=GenBank:WP_001037190.1;Name=WP_001037190.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525165.1;locus_tag=CCO47_RS12635;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_001037190.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2590034 2590312 . - . ID=gene-CCO47_RS12640;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=CCO47_RS12640;old_locus_tag=CCO47_12640 NZ_CP075113.1 Protein Homology CDS 2590034 2590312 . - 0 ID=cds-WP_000823878.1;Parent=gene-CCO47_RS12640;Dbxref=GenBank:WP_000823878.1;Name=WP_000823878.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460738.1;locus_tag=CCO47_RS12640;product=stress-induced protein YchH;protein_id=WP_000823878.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2590588 2591172 . + . ID=gene-CCO47_RS12645;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=CCO47_RS12645;old_locus_tag=CCO47_12645 NZ_CP075113.1 Protein Homology CDS 2590588 2591172 . + 0 ID=cds-WP_001675521.1;Parent=gene-CCO47_RS12645;Dbxref=GenBank:WP_001675521.1;Name=WP_001675521.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=CCO47_RS12645;product=aminoacyl-tRNA hydrolase;protein_id=WP_001675521.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2591289 2592380 . + . ID=gene-CCO47_RS12650;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=CCO47_RS12650;old_locus_tag=CCO47_12650 NZ_CP075113.1 Protein Homology CDS 2591289 2592380 . + 0 ID=cds-WP_000505850.1;Parent=gene-CCO47_RS12650;Dbxref=GenBank:WP_000505850.1;Name=WP_000505850.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=CCO47_RS12650;product=redox-regulated ATPase YchF;protein_id=WP_000505850.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2593139 2593759 . + . ID=gene-CCO47_RS12655;Name=CCO47_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12655;old_locus_tag=CCO47_12655 NZ_CP075113.1 Protein Homology CDS 2593139 2593759 . + 0 ID=cds-WP_000376824.1;Parent=gene-CCO47_RS12655;Dbxref=GenBank:WP_000376824.1;Name=WP_000376824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376822.1;locus_tag=CCO47_RS12655;product=hypothetical protein;protein_id=WP_000376824.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2593798 2594250 . + . ID=gene-CCO47_RS12660;Name=CCO47_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12660;old_locus_tag=CCO47_12660 NZ_CP075113.1 Protein Homology CDS 2593798 2594250 . + 0 ID=cds-WP_000487330.1;Parent=gene-CCO47_RS12660;Dbxref=GenBank:WP_000487330.1;Name=WP_000487330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487332.1;locus_tag=CCO47_RS12660;product=hypothetical protein;protein_id=WP_000487330.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2594745 2594816 . + . ID=gene-CCO47_RS24425;Name=CCO47_RS24425;end_range=2594816,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24425;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 2594745 2594816 . + 0 ID=cds-CCO47_RS24425;Parent=gene-CCO47_RS24425;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2594816,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135374.1;locus_tag=CCO47_RS24425;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2595165 2596283 . + . ID=gene-CCO47_RS12665;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=CCO47_RS12665;old_locus_tag=CCO47_12665 NZ_CP075113.1 Protein Homology CDS 2595165 2596283 . + 0 ID=cds-WP_001058303.1;Parent=gene-CCO47_RS12665;Dbxref=GenBank:WP_001058303.1;Name=WP_001058303.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=CCO47_RS12665;product=hydrogenase 1 small subunit;protein_id=WP_001058303.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2596280 2598073 . + . ID=gene-CCO47_RS12670;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=CCO47_RS12670;old_locus_tag=CCO47_12670 NZ_CP075113.1 Protein Homology CDS 2596280 2598073 . + 0 ID=cds-WP_000070976.1;Parent=gene-CCO47_RS12670;Dbxref=GenBank:WP_000070976.1;Name=WP_000070976.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460743.1;locus_tag=CCO47_RS12670;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_000070976.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2598092 2598823 . + . ID=gene-CCO47_RS12675;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=CCO47_RS12675;old_locus_tag=CCO47_12675 NZ_CP075113.1 Protein Homology CDS 2598092 2598823 . + 0 ID=cds-WP_000147027.1;Parent=gene-CCO47_RS12675;Dbxref=GenBank:WP_000147027.1;Name=WP_000147027.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460744.1;locus_tag=CCO47_RS12675;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_000147027.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2598820 2599416 . + . ID=gene-CCO47_RS12680;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=CCO47_RS12680;old_locus_tag=CCO47_12680 NZ_CP075113.1 Protein Homology CDS 2598820 2599416 . + 0 ID=cds-WP_000993798.1;Parent=gene-CCO47_RS12680;Dbxref=GenBank:WP_000993798.1;Name=WP_000993798.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460745.1;locus_tag=CCO47_RS12680;product=hydrogenase 1 maturation protease;protein_id=WP_000993798.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2599406 2599810 . + . ID=gene-CCO47_RS12685;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=CCO47_RS12685;old_locus_tag=CCO47_12685 NZ_CP075113.1 Protein Homology CDS 2599406 2599810 . + 0 ID=cds-WP_001262580.1;Parent=gene-CCO47_RS12685;Dbxref=GenBank:WP_001262580.1;Name=WP_001262580.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460746.1;locus_tag=CCO47_RS12685;product=hydrogenase-1 operon protein HyaE;protein_id=WP_001262580.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2599807 2600655 . + . ID=gene-CCO47_RS12690;Name=CCO47_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12690;old_locus_tag=CCO47_12690 NZ_CP075113.1 Protein Homology CDS 2599807 2600655 . + 0 ID=cds-WP_000063376.1;Parent=gene-CCO47_RS12690;Dbxref=GenBank:WP_000063376.1;Name=WP_000063376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460747.1;locus_tag=CCO47_RS12690;product=hydrogenase expression/formation protein;protein_id=WP_000063376.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2600730 2602274 . + . ID=gene-CCO47_RS12695;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=CCO47_RS12695;old_locus_tag=CCO47_12695 NZ_CP075113.1 Protein Homology CDS 2600730 2602274 . + 0 ID=cds-WP_000263607.1;Parent=gene-CCO47_RS12695;Dbxref=GenBank:WP_000263607.1;Name=WP_000263607.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460748.1;locus_tag=CCO47_RS12695;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_000263607.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2602286 2603422 . + . ID=gene-CCO47_RS12700;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=CCO47_RS12700;old_locus_tag=CCO47_12700 NZ_CP075113.1 Protein Homology CDS 2602286 2603422 . + 0 ID=cds-WP_000888110.1;Parent=gene-CCO47_RS12700;Dbxref=GenBank:WP_000888110.1;Name=WP_000888110.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460749.1;locus_tag=CCO47_RS12700;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000888110.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2603435 2603524 . + . ID=gene-CCO47_RS12705;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=CCO47_RS12705;old_locus_tag=CCO47_12705 NZ_CP075113.1 Protein Homology CDS 2603435 2603524 . + 0 ID=cds-WP_000270301.1;Parent=gene-CCO47_RS12705;Dbxref=GenBank:WP_000270301.1;Name=WP_000270301.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=CCO47_RS12705;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270301.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2603919 2605193 . + . ID=gene-CCO47_RS12710;Name=CCO47_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12710;old_locus_tag=CCO47_12710 NZ_CP075113.1 Protein Homology CDS 2603919 2605193 . + 0 ID=cds-WP_001526439.1;Parent=gene-CCO47_RS12710;Dbxref=GenBank:WP_001526439.1;Name=WP_001526439.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=CCO47_RS12710;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_001526439.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2605407 2607119 . + . ID=gene-CCO47_RS12715;Name=CCO47_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12715;old_locus_tag=CCO47_12715 NZ_CP075113.1 Protein Homology CDS 2605407 2607119 . + 0 ID=cds-WP_000612838.1;Parent=gene-CCO47_RS12715;Dbxref=GenBank:WP_000612838.1;Name=WP_000612838.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=CCO47_RS12715;product=alpha%2Calpha-trehalase;protein_id=WP_000612838.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2607182 2607436 . - . ID=gene-CCO47_RS12720;Name=CCO47_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12720;old_locus_tag=CCO47_12720 NZ_CP075113.1 Protein Homology CDS 2607182 2607436 . - 0 ID=cds-WP_000511321.1;Parent=gene-CCO47_RS12720;Dbxref=GenBank:WP_000511321.1;Name=WP_000511321.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460753.1;locus_tag=CCO47_RS12720;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000511321.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2607605 2608339 . + . ID=gene-CCO47_RS12725;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=CCO47_RS12725;old_locus_tag=CCO47_12725 NZ_CP075113.1 Protein Homology CDS 2607605 2608339 . + 0 ID=cds-WP_000017414.1;Parent=gene-CCO47_RS12725;Dbxref=GenBank:WP_000017414.1;Name=WP_000017414.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=CCO47_RS12725;product=flagellar brake protein YcgR;protein_id=WP_000017414.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2608353 2608964 . - . ID=gene-CCO47_RS12730;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=CCO47_RS12730;old_locus_tag=CCO47_12730 NZ_CP075113.1 Protein Homology CDS 2608353 2608964 . - 0 ID=cds-WP_000776974.1;Parent=gene-CCO47_RS12730;Dbxref=GenBank:WP_000776974.1;Name=WP_000776974.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460755.1;locus_tag=CCO47_RS12730;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_000776974.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2609135 2610049 . + . ID=gene-CCO47_RS12735;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=CCO47_RS12735;old_locus_tag=CCO47_12735 NZ_CP075113.1 Protein Homology CDS 2609135 2610049 . + 0 ID=cds-WP_000051603.1;Parent=gene-CCO47_RS12735;Dbxref=GenBank:WP_000051603.1;Name=WP_000051603.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460756.1;locus_tag=CCO47_RS12735;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_000051603.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2610146 2611813 . + . ID=gene-CCO47_RS12740;Name=CCO47_RS12740;end_range=2611813,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS12740;old_locus_tag=CCO47_12740;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 2610146 2611813 . + 0 ID=cds-CCO47_RS12740;Parent=gene-CCO47_RS12740;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;end_range=2611813,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF003714.0;locus_tag=CCO47_RS12740;partial=true;product=potassium/proton antiporter;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2611817 2611909 . - . ID=gene-CCO47_RS24570;Name=CCO47_RS24570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24570;partial=true;pseudo=true;start_range=.,2611817 NZ_CP075113.1 Protein Homology CDS 2611817 2611909 . - 0 ID=cds-CCO47_RS24570;Parent=gene-CCO47_RS24570;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049075.2;locus_tag=CCO47_RS24570;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2611817;transl_table=11 NZ_CP075113.1 RefSeq gene 2611942 2613012 . - . ID=gene-CCO47_RS12745;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=CCO47_RS12745;old_locus_tag=CCO47_12745 NZ_CP075113.1 Protein Homology CDS 2611942 2613012 . - 0 ID=cds-WP_000197910.1;Parent=gene-CCO47_RS12745;Dbxref=GenBank:WP_000197910.1;Name=WP_000197910.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=CCO47_RS12745;product=catabolic alanine racemase DadX;protein_id=WP_000197910.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2613026 2614324 . - . ID=gene-CCO47_RS12750;Name=CCO47_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12750;old_locus_tag=CCO47_12750 NZ_CP075113.1 Protein Homology CDS 2613026 2614324 . - 0 ID=cds-WP_001266937.1;Parent=gene-CCO47_RS12750;Dbxref=GenBank:WP_001266937.1;Name=WP_001266937.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460759.1;locus_tag=CCO47_RS12750;product=D-amino acid dehydrogenase;protein_id=WP_001266937.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2614647 2616179 . + . ID=gene-CCO47_RS12755;Name=CCO47_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12755;old_locus_tag=CCO47_12755 NZ_CP075113.1 Protein Homology CDS 2614647 2616179 . + 0 ID=cds-WP_001240763.1;Parent=gene-CCO47_RS12755;Dbxref=GenBank:WP_001240763.1;Name=WP_001240763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460760.3;locus_tag=CCO47_RS12755;product=SpoVR family protein;protein_id=WP_001240763.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2616226 2616945 . - . ID=gene-CCO47_RS12760;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=CCO47_RS12760;old_locus_tag=CCO47_12760 NZ_CP075113.1 Protein Homology CDS 2616226 2616945 . - 0 ID=cds-WP_000234826.1;Parent=gene-CCO47_RS12760;Dbxref=GenBank:WP_000234826.1;Name=WP_000234826.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460761.1;locus_tag=CCO47_RS12760;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234826.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2617165 2618709 . + . ID=gene-CCO47_RS12765;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=CCO47_RS12765;old_locus_tag=CCO47_12765 NZ_CP075113.1 Protein Homology CDS 2617165 2618709 . + 0 ID=cds-WP_000406438.1;Parent=gene-CCO47_RS12765;Dbxref=GenBank:WP_000406438.1;Name=WP_000406438.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460762.1;locus_tag=CCO47_RS12765;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_000406438.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2618851 2619381 . + . ID=gene-CCO47_RS12770;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=CCO47_RS12770;old_locus_tag=CCO47_12770 NZ_CP075113.1 Protein Homology CDS 2618851 2619381 . + 0 ID=cds-WP_000943475.1;Parent=gene-CCO47_RS12770;Dbxref=GenBank:WP_000943475.1;Name=WP_000943475.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460763.1;locus_tag=CCO47_RS12770;product=disulfide bond formation protein DsbB;protein_id=WP_000943475.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2619490 2619831 . + . ID=gene-CCO47_RS12775;Name=CCO47_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12775;old_locus_tag=CCO47_12775 NZ_CP075113.1 Protein Homology CDS 2619490 2619831 . + 0 ID=cds-WP_000018967.1;Parent=gene-CCO47_RS12775;Dbxref=GenBank:WP_000018967.1;Name=WP_000018967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460764.1;locus_tag=CCO47_RS12775;product=TehB family protein;protein_id=WP_000018967.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2619903 2620076 . - . ID=gene-CCO47_RS12780;Name=CCO47_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12780;old_locus_tag=CCO47_12780 NZ_CP075113.1 Protein Homology CDS 2619903 2620076 . - 0 ID=cds-WP_001083582.1;Parent=gene-CCO47_RS12780;Dbxref=GenBank:WP_001083582.1;Name=WP_001083582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460765.1;locus_tag=CCO47_RS12780;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001083582.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2620268 2620405 . - . ID=gene-CCO47_RS12785;Name=CCO47_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12785;old_locus_tag=CCO47_12785 NZ_CP075113.1 Protein Homology CDS 2620268 2620405 . - 0 ID=cds-WP_001574247.1;Parent=gene-CCO47_RS12785;Dbxref=GenBank:WP_001574247.1;Name=WP_001574247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=CCO47_RS12785;product=hypothetical protein;protein_id=WP_001574247.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2620757 2621203 . - . ID=gene-CCO47_RS12790;Name=CCO47_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12790;old_locus_tag=CCO47_12790 NZ_CP075113.1 Protein Homology CDS 2620757 2621203 . - 0 ID=cds-WP_001285703.1;Parent=gene-CCO47_RS12790;Dbxref=GenBank:WP_001285703.1;Name=WP_001285703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=CCO47_RS12790;product=cysteine cluster protein YcgN;protein_id=WP_001285703.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2621296 2621955 . - . ID=gene-CCO47_RS12795;Name=CCO47_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12795;old_locus_tag=CCO47_12795 NZ_CP075113.1 Protein Homology CDS 2621296 2621955 . - 0 ID=cds-WP_001519895.1;Parent=gene-CCO47_RS12795;Dbxref=GenBank:WP_001519895.1;Name=WP_001519895.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460768.1;locus_tag=CCO47_RS12795;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_001519895.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2622005 2622298 . - . ID=gene-CCO47_RS12800;Name=CCO47_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12800;old_locus_tag=CCO47_12800 NZ_CP075113.1 Protein Homology CDS 2622005 2622298 . - 0 ID=cds-WP_001525604.1;Parent=gene-CCO47_RS12800;Dbxref=GenBank:WP_001525604.1;Name=WP_001525604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=CCO47_RS12800;product=YcgL domain-containing protein;protein_id=WP_001525604.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2622424 2623131 . + . ID=gene-CCO47_RS12805;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=CCO47_RS12805;old_locus_tag=CCO47_12805 NZ_CP075113.1 Protein Homology CDS 2622424 2623131 . + 0 ID=cds-WP_000072527.1;Parent=gene-CCO47_RS12805;Dbxref=GenBank:WP_000072527.1;Name=WP_000072527.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460770.1;locus_tag=CCO47_RS12805;product=septum site-determining protein MinC;protein_id=WP_000072527.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2623155 2623967 . + . ID=gene-CCO47_RS12810;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=CCO47_RS12810;old_locus_tag=CCO47_12810 NZ_CP075113.1 Protein Homology CDS 2623155 2623967 . + 0 ID=cds-WP_000101047.1;Parent=gene-CCO47_RS12810;Dbxref=GenBank:WP_000101047.1;Name=WP_000101047.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=CCO47_RS12810;product=septum site-determining protein MinD;protein_id=WP_000101047.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2623971 2624237 . + . ID=gene-CCO47_RS12815;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=CCO47_RS12815;old_locus_tag=CCO47_12815 NZ_CP075113.1 Protein Homology CDS 2623971 2624237 . + 0 ID=cds-WP_001185666.1;Parent=gene-CCO47_RS12815;Dbxref=GenBank:WP_001185666.1;Name=WP_001185666.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460772.1;locus_tag=CCO47_RS12815;product=cell division topological specificity factor MinE;protein_id=WP_001185666.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2624359 2625486 . - . ID=gene-CCO47_RS12820;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=CCO47_RS12820;old_locus_tag=CCO47_12820 NZ_CP075113.1 Protein Homology CDS 2624359 2625486 . - 0 ID=cds-WP_001109122.1;Parent=gene-CCO47_RS12820;Dbxref=GenBank:WP_001109122.1;Name=WP_001109122.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416318.1;locus_tag=CCO47_RS12820;product=ribonuclease D;protein_id=WP_001109122.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2625559 2627244 . - . ID=gene-CCO47_RS12825;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=CCO47_RS12825;old_locus_tag=CCO47_12825 NZ_CP075113.1 Protein Homology CDS 2625559 2627244 . - 0 ID=cds-WP_000758418.1;Parent=gene-CCO47_RS12825;Dbxref=GenBank:WP_000758418.1;Name=WP_000758418.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460774.1;locus_tag=CCO47_RS12825;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_000758418.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2627449 2628030 . - . ID=gene-CCO47_RS12830;Name=CCO47_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12830;old_locus_tag=CCO47_12830 NZ_CP075113.1 Protein Homology CDS 2627449 2628030 . - 0 ID=cds-WP_000290594.1;Parent=gene-CCO47_RS12830;Dbxref=GenBank:WP_000290594.1;Name=WP_000290594.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460775.1;locus_tag=CCO47_RS12830;product=Slp family lipoprotein;protein_id=WP_000290594.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2628102 2628797 . - . ID=gene-CCO47_RS12835;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=CCO47_RS12835;old_locus_tag=CCO47_12835 NZ_CP075113.1 Protein Homology CDS 2628102 2628797 . - 0 ID=cds-WP_001221017.1;Parent=gene-CCO47_RS12835;Dbxref=GenBank:WP_001221017.1;Name=WP_001221017.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460776.1;locus_tag=CCO47_RS12835;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001221017.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2628855 2630765 . - . ID=gene-CCO47_RS12840;Name=CCO47_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12840;old_locus_tag=CCO47_12840 NZ_CP075113.1 Protein Homology CDS 2628855 2630765 . - 0 ID=cds-WP_000128806.1;Parent=gene-CCO47_RS12840;Dbxref=GenBank:WP_000128806.1;Name=WP_000128806.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460777.1;locus_tag=CCO47_RS12840;product=DNA repair helicase YoaA;protein_id=WP_000128806.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2630896 2631240 . + . ID=gene-CCO47_RS12845;Name=CCO47_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12845;old_locus_tag=CCO47_12845 NZ_CP075113.1 Protein Homology CDS 2630896 2631240 . + 0 ID=cds-WP_000029550.1;Parent=gene-CCO47_RS12845;Dbxref=GenBank:WP_000029550.1;Name=WP_000029550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460778.1;locus_tag=CCO47_RS12845;product=RidA family protein;protein_id=WP_000029550.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2631246 2631425 . - . ID=gene-CCO47_RS12850;Name=CCO47_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12850;old_locus_tag=CCO47_12850 NZ_CP075113.1 Protein Homology CDS 2631246 2631425 . - 0 ID=cds-WP_000457328.1;Parent=gene-CCO47_RS12850;Dbxref=GenBank:WP_000457328.1;Name=WP_000457328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460779.1;locus_tag=CCO47_RS12850;product=YoaH family protein;protein_id=WP_000457328.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2631506 2632870 . + . ID=gene-CCO47_RS12855;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=CCO47_RS12855;old_locus_tag=CCO47_12855 NZ_CP075113.1 Protein Homology CDS 2631506 2632870 . + 0 ID=cds-WP_000978451.1;Parent=gene-CCO47_RS12855;Dbxref=GenBank:WP_000978451.1;Name=WP_000978451.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460780.1;locus_tag=CCO47_RS12855;product=aminodeoxychorismate synthase component 1;protein_id=WP_000978451.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2632874 2633452 . + . ID=gene-CCO47_RS12860;Name=CCO47_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12860;old_locus_tag=CCO47_12860 NZ_CP075113.1 Protein Homology CDS 2632874 2633452 . + 0 ID=cds-WP_000381548.1;Parent=gene-CCO47_RS12860;Dbxref=GenBank:WP_000381548.1;Name=WP_000381548.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460781.1;locus_tag=CCO47_RS12860;product=CoA pyrophosphatase;protein_id=WP_000381548.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2633716 2635080 . + . ID=gene-CCO47_RS12865;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=CCO47_RS12865;old_locus_tag=CCO47_12865 NZ_CP075113.1 Protein Homology CDS 2633716 2635080 . + 0 ID=cds-WP_000624273.1;Parent=gene-CCO47_RS12865;Dbxref=GenBank:WP_000624273.1;Name=WP_000624273.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460782.1;locus_tag=CCO47_RS12865;product=L-serine ammonia-lyase;protein_id=WP_000624273.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2635218 2636819 . + . ID=gene-CCO47_RS12870;Name=CCO47_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12870;old_locus_tag=CCO47_12870 NZ_CP075113.1 Protein Homology CDS 2635218 2636819 . + 0 ID=cds-WP_001192535.1;Parent=gene-CCO47_RS12870;Dbxref=GenBank:WP_001192535.1;Name=WP_001192535.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192512.1;locus_tag=CCO47_RS12870;product=EAL domain-containing protein;protein_id=WP_001192535.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2636841 2638400 . - . ID=gene-CCO47_RS12875;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=CCO47_RS12875;old_locus_tag=CCO47_12875 NZ_CP075113.1 Protein Homology CDS 2636841 2638400 . - 0 ID=cds-WP_000421815.1;Parent=gene-CCO47_RS12875;Dbxref=GenBank:WP_000421815.1;Name=WP_000421815.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460784.2;locus_tag=CCO47_RS12875;product=CNNM family cation transport protein YoaE;protein_id=WP_000421815.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2638388 2638720 . - . ID=gene-CCO47_RS24430;Name=CCO47_RS24430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24430 NZ_CP075113.1 Protein Homology CDS 2638388 2638720 . - 0 ID=cds-WP_011233029.1;Parent=gene-CCO47_RS24430;Dbxref=GenBank:WP_011233029.1;Name=WP_011233029.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046943.3;locus_tag=CCO47_RS24430;product=protein YoaL;protein_id=WP_011233029.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2638873 2639841 . + . ID=gene-CCO47_RS12880;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=CCO47_RS12880;old_locus_tag=CCO47_12880 NZ_CP075113.1 Protein Homology CDS 2638873 2639841 . + 0 ID=cds-WP_000150523.1;Parent=gene-CCO47_RS12880;Dbxref=GenBank:WP_000150523.1;Name=WP_000150523.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460786.1;locus_tag=CCO47_RS12880;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150523.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2639894 2640694 . + . ID=gene-CCO47_RS12885;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=CCO47_RS12885;old_locus_tag=CCO47_12885 NZ_CP075113.1 Protein Homology CDS 2639894 2640694 . + 0 ID=cds-WP_000406920.1;Parent=gene-CCO47_RS12885;Dbxref=GenBank:WP_000406920.1;Name=WP_000406920.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=CCO47_RS12885;product=PTS mannose transporter subunit IIC;protein_id=WP_000406920.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2640707 2641558 . + . ID=gene-CCO47_RS12890;Name=CCO47_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12890;old_locus_tag=CCO47_12890 NZ_CP075113.1 Protein Homology CDS 2640707 2641558 . + 0 ID=cds-WP_001518647.1;Parent=gene-CCO47_RS12890;Dbxref=GenBank:WP_001518647.1;Name=WP_001518647.1;Ontology_term=GO:0009401,GO:0015761,GO:0022870,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-mannose phosphotransferase system transporter activity|0022870||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,mannose transmembrane transport|0015761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228151.1;locus_tag=CCO47_RS12890;product=PTS mannose transporter subunit IID;protein_id=WP_001518647.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2641617 2642075 . + . ID=gene-CCO47_RS12895;Name=CCO47_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12895;old_locus_tag=CCO47_12895 NZ_CP075113.1 Protein Homology CDS 2641617 2642075 . + 0 ID=cds-WP_000156283.1;Parent=gene-CCO47_RS12895;Dbxref=GenBank:WP_000156283.1;Name=WP_000156283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=CCO47_RS12895;product=DUF986 family protein;protein_id=WP_000156283.1;transl_table=11 NZ_CP075113.1 cmsearch riboswitch 2642272 2642373 . + . ID=id-NZ_CP075113.1:2642272..2642373;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CP075113.1 RefSeq gene 2642485 2643051 . + . ID=gene-CCO47_RS12900;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=CCO47_RS12900;old_locus_tag=CCO47_12900 NZ_CP075113.1 Protein Homology CDS 2642485 2643051 . + 0 ID=cds-WP_001518359.1;Parent=gene-CCO47_RS12900;Dbxref=GenBank:WP_001518359.1;Name=WP_001518359.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=CCO47_RS12900;product=manganese efflux pump MntP;protein_id=WP_001518359.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2643048 2643857 . - . ID=gene-CCO47_RS12905;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=CCO47_RS12905;old_locus_tag=CCO47_12905 NZ_CP075113.1 Protein Homology CDS 2643048 2643857 . - 0 ID=cds-WP_000010923.1;Parent=gene-CCO47_RS12905;Dbxref=GenBank:WP_000010923.1;Name=WP_000010923.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460791.1;locus_tag=CCO47_RS12905;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_000010923.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2643923 2645668 . - . ID=gene-CCO47_RS12910;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=CCO47_RS12910;old_locus_tag=CCO47_12910 NZ_CP075113.1 Protein Homology CDS 2643923 2645668 . - 0 ID=cds-WP_000730323.1;Parent=gene-CCO47_RS12910;Dbxref=GenBank:WP_000730323.1;Name=WP_000730323.1;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005886;gbkey=CDS;gene=ftsI;go_component=plasma membrane|0005886||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460792.1;locus_tag=CCO47_RS12910;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000730323.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2645888 2646097 . - . ID=gene-CCO47_RS12915;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO47_RS12915;old_locus_tag=CCO47_12915 NZ_CP075113.1 Protein Homology CDS 2645888 2646097 . - 0 ID=cds-WP_001062678.1;Parent=gene-CCO47_RS12915;Dbxref=GenBank:WP_001062678.1;Name=WP_001062678.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=CCO47_RS12915;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2646110 2646253 . - . ID=gene-CCO47_RS12920;Name=CCO47_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12920;old_locus_tag=CCO47_12920 NZ_CP075113.1 Protein Homology CDS 2646110 2646253 . - 0 ID=cds-WP_001675517.1;Parent=gene-CCO47_RS12920;Dbxref=GenBank:WP_001675517.1;Name=WP_001675517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=CCO47_RS12920;product=DUF2627 domain-containing protein;protein_id=WP_001675517.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2646902 2647189 . - . ID=gene-CCO47_RS12925;Name=CCO47_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12925;old_locus_tag=CCO47_12925 NZ_CP075113.1 Protein Homology CDS 2646902 2647189 . - 0 ID=cds-WP_001000659.1;Parent=gene-CCO47_RS12925;Dbxref=GenBank:WP_001000659.1;Name=WP_001000659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460795.1;locus_tag=CCO47_RS12925;product=YebO family protein;protein_id=WP_001000659.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2647260 2647403 . - . ID=gene-CCO47_RS12930;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=CCO47_RS12930;old_locus_tag=CCO47_12930 NZ_CP075113.1 Protein Homology CDS 2647260 2647403 . - 0 ID=cds-WP_000847421.1;Parent=gene-CCO47_RS12930;Dbxref=GenBank:WP_000847421.1;Name=WP_000847421.1;Ontology_term=GO:0046677;gbkey=CDS;gene=mgrB;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460796.1;locus_tag=CCO47_RS12930;product=PhoP/PhoQ regulatory lipoprotein MgrB;protein_id=WP_000847421.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2647561 2647800 . + . ID=gene-CCO47_RS12935;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=CCO47_RS12935;old_locus_tag=CCO47_12935 NZ_CP075113.1 Protein Homology CDS 2647561 2647800 . + 0 ID=cds-WP_001236777.1;Parent=gene-CCO47_RS12935;Dbxref=GenBank:WP_001236777.1;Name=WP_001236777.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=CCO47_RS12935;product=invasion protein YobH;protein_id=WP_001236777.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2648012 2648803 . - . ID=gene-CCO47_RS12940;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=CCO47_RS12940;old_locus_tag=CCO47_12940 NZ_CP075113.1 Protein Homology CDS 2648012 2648803 . - 0 ID=cds-WP_001262195.1;Parent=gene-CCO47_RS12940;Dbxref=GenBank:WP_001262195.1;Name=WP_001262195.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460798.1;locus_tag=CCO47_RS12940;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262195.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2648979 2650352 . + . ID=gene-CCO47_RS12945;Name=CCO47_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12945;old_locus_tag=CCO47_12945 NZ_CP075113.1 Protein Homology CDS 2648979 2650352 . + 0 ID=cds-WP_000416139.1;Parent=gene-CCO47_RS12945;Dbxref=GenBank:WP_000416139.1;Name=WP_000416139.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460799.1;locus_tag=CCO47_RS12945;product=MFS transporter;protein_id=WP_000416139.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2650400 2651281 . - . ID=gene-CCO47_RS12950;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=CCO47_RS12950;old_locus_tag=CCO47_12950 NZ_CP075113.1 Protein Homology CDS 2650400 2651281 . - 0 ID=cds-WP_000984498.1;Parent=gene-CCO47_RS12950;Dbxref=GenBank:WP_000984498.1;Name=WP_000984498.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=CCO47_RS12950;product=protease HtpX;protein_id=WP_000984498.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2651474 2653522 . - . ID=gene-CCO47_RS12955;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;gene_synonym=tsp;locus_tag=CCO47_RS12955;old_locus_tag=CCO47_12955 NZ_CP075113.1 Protein Homology CDS 2651474 2653522 . - 0 ID=cds-WP_001091237.1;Parent=gene-CCO47_RS12955;Dbxref=GenBank:WP_001091237.1;Name=WP_001091237.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=CCO47_RS12955;product=carboxy terminal-processing peptidase;protein_id=WP_001091237.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2653542 2654228 . - . ID=gene-CCO47_RS12960;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=CCO47_RS12960;old_locus_tag=CCO47_12960 NZ_CP075113.1 Protein Homology CDS 2653542 2654228 . - 0 ID=cds-WP_000431401.1;Parent=gene-CCO47_RS12960;Dbxref=GenBank:WP_000431401.1;Name=WP_000431401.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460802.1;locus_tag=CCO47_RS12960;product=RNA chaperone ProQ;protein_id=WP_000431401.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2654326 2654823 . - . ID=gene-CCO47_RS12965;Name=CCO47_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12965;old_locus_tag=CCO47_12965 NZ_CP075113.1 Protein Homology CDS 2654326 2654823 . - 0 ID=cds-WP_001518229.1;Parent=gene-CCO47_RS12965;Dbxref=GenBank:WP_001518229.1;Name=WP_001518229.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=CCO47_RS12965;product=GAF domain-containing protein;protein_id=WP_001518229.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2654952 2656235 . + . ID=gene-CCO47_RS12970;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=CCO47_RS12970;old_locus_tag=CCO47_12970 NZ_CP075113.1 Protein Homology CDS 2654952 2656235 . + 0 ID=cds-WP_001207294.1;Parent=gene-CCO47_RS12970;Dbxref=GenBank:WP_001207294.1;Name=WP_001207294.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=CCO47_RS12970;product=membrane integrity lipid transport subunit YebS;protein_id=WP_001207294.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2656204 2658837 . + . ID=gene-CCO47_RS12975;Name=CCO47_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12975;old_locus_tag=CCO47_12975 NZ_CP075113.1 Protein Homology CDS 2656204 2658837 . + 0 ID=cds-WP_001574233.1;Parent=gene-CCO47_RS12975;Dbxref=GenBank:WP_001574233.1;Name=WP_001574233.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=CCO47_RS12975;product=PqiB family protein;protein_id=WP_001574233.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2658915 2660354 . + . ID=gene-CCO47_RS12980;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=CCO47_RS12980;old_locus_tag=CCO47_12980 NZ_CP075113.1 Protein Homology CDS 2658915 2660354 . + 0 ID=cds-WP_001531515.1;Parent=gene-CCO47_RS12980;Dbxref=GenBank:WP_001531515.1;Name=WP_001531515.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460806.1;locus_tag=CCO47_RS12980;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_001531515.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2660472 2660708 . + . ID=gene-CCO47_RS12985;Name=CCO47_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12985;old_locus_tag=CCO47_12985 NZ_CP075113.1 Protein Homology CDS 2660472 2660708 . + 0 ID=cds-WP_024131108.1;Parent=gene-CCO47_RS12985;Dbxref=GenBank:WP_024131108.1;Name=WP_024131108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=CCO47_RS12985;product=YebV family protein;protein_id=WP_024131108.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2660819 2661010 . + . ID=gene-CCO47_RS12990;Name=CCO47_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS12990;old_locus_tag=CCO47_12990 NZ_CP075113.1 Protein Homology CDS 2660819 2661010 . + 0 ID=cds-WP_000457838.1;Parent=gene-CCO47_RS12990;Dbxref=GenBank:WP_000457838.1;Name=WP_000457838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460808.1;locus_tag=CCO47_RS12990;product=YdfD/YebW family protein;protein_id=WP_000457838.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2661029 2661679 . - . ID=gene-CCO47_RS12995;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=CCO47_RS12995;old_locus_tag=CCO47_12995 NZ_CP075113.1 Protein Homology CDS 2661029 2661679 . - 0 ID=cds-WP_000986173.1;Parent=gene-CCO47_RS12995;Dbxref=GenBank:WP_000986173.1;Name=WP_000986173.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=CCO47_RS12995;product=protein-serine/threonine phosphatase;protein_id=WP_000986173.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2661697 2661912 . - . ID=gene-CCO47_RS24365;Name=CCO47_RS24365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24365 NZ_CP075113.1 Protein Homology CDS 2661697 2661912 . - 0 ID=cds-WP_001574231.1;Parent=gene-CCO47_RS24365;Dbxref=GenBank:WP_001574231.1;Name=WP_001574231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529227.1;locus_tag=CCO47_RS24365;product=hypothetical protein;protein_id=WP_001574231.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2661903 2662067 . - . ID=gene-CCO47_RS13000;Name=CCO47_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13000;old_locus_tag=CCO47_13000 NZ_CP075113.1 Protein Homology CDS 2661903 2662067 . - 0 ID=cds-WP_001134856.1;Parent=gene-CCO47_RS13000;Dbxref=GenBank:WP_001134856.1;Name=WP_001134856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=CCO47_RS13000;product=membrane protein;protein_id=WP_001134856.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2662352 2663074 . - . ID=gene-CCO47_RS13005;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=protein_coding;locus_tag=CCO47_RS13005;old_locus_tag=CCO47_13005 NZ_CP075113.1 Protein Homology CDS 2662352 2663074 . - 0 ID=cds-WP_000182072.1;Parent=gene-CCO47_RS13005;Dbxref=GenBank:WP_000182072.1;Name=WP_000182072.1;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=CCO47_RS13005;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;protein_id=WP_000182072.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2663758 2664099 . + . ID=gene-CCO47_RS13010;Name=CCO47_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13010;old_locus_tag=CCO47_13010 NZ_CP075113.1 Protein Homology CDS 2663758 2664099 . + 0 ID=cds-WP_001752424.1;Parent=gene-CCO47_RS13010;Dbxref=GenBank:WP_001752424.1;Name=WP_001752424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460812.1;locus_tag=CCO47_RS13010;product=DUF1398 family protein;protein_id=WP_001752424.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2664481 2664957 . + . ID=gene-CCO47_RS13015;Name=CCO47_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13015;old_locus_tag=CCO47_13015 NZ_CP075113.1 Protein Homology CDS 2664481 2664957 . + 0 ID=cds-WP_000030946.1;Parent=gene-CCO47_RS13015;Dbxref=GenBank:WP_000030946.1;Name=WP_000030946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030934.1;locus_tag=CCO47_RS13015;product=hypothetical protein;protein_id=WP_000030946.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2665330 2665749 . - . ID=gene-CCO47_RS13020;Name=CCO47_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13020;old_locus_tag=CCO47_13020 NZ_CP075113.1 Protein Homology CDS 2665330 2665749 . - 0 ID=cds-WP_000354407.1;Parent=gene-CCO47_RS13020;Dbxref=GenBank:WP_000354407.1;Name=WP_000354407.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460813.1;locus_tag=CCO47_RS13020;product=GNAT family N-acetyltransferase;protein_id=WP_000354407.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2666119 2666388 . + . ID=gene-CCO47_RS13025;Name=CCO47_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13025;old_locus_tag=CCO47_13025 NZ_CP075113.1 Protein Homology CDS 2666119 2666388 . + 0 ID=cds-WP_001752421.1;Parent=gene-CCO47_RS13025;Dbxref=GenBank:WP_001752421.1;Name=WP_001752421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460814.1;locus_tag=CCO47_RS13025;product=hypothetical protein;protein_id=WP_001752421.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2666554 2666694 . + . ID=gene-CCO47_RS13030;Name=CCO47_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13030;old_locus_tag=CCO47_13030 NZ_CP075113.1 Protein Homology CDS 2666554 2666694 . + 0 ID=cds-WP_001617922.1;Parent=gene-CCO47_RS13030;Dbxref=GenBank:WP_001617922.1;Name=WP_001617922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460815.3;locus_tag=CCO47_RS13030;product=hypothetical protein;protein_id=WP_001617922.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2666840 2668034 . - . ID=gene-CCO47_RS13035;Name=CCO47_RS13035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS13035;old_locus_tag=CCO47_13035;pseudo=true NZ_CP075113.1 Protein Homology CDS 2666840 2668034 . - 0 ID=cds-CCO47_RS13035;Parent=gene-CCO47_RS13035;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=CCO47_RS13035;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2668093 2668526 . + . ID=gene-CCO47_RS13040;Name=CCO47_RS13040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS13040;old_locus_tag=CCO47_13040;partial=true;pseudo=true;start_range=.,2668093 NZ_CP075113.1 Protein Homology CDS 2668093 2668526 . + 0 ID=cds-CCO47_RS13040;Parent=gene-CCO47_RS13040;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001189081.1;locus_tag=CCO47_RS13040;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,2668093;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2669822 2670737 . + . ID=gene-CCO47_RS13045;Name=pagO;gbkey=Gene;gene=pagO;gene_biotype=pseudogene;locus_tag=CCO47_RS13045;old_locus_tag=CCO47_13045;pseudo=true NZ_CP075113.1 Protein Homology CDS 2669822 2670737 . + 0 ID=cds-CCO47_RS13045;Parent=gene-CCO47_RS13045;Note=frameshifted;gbkey=CDS;gene=pagO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460818.1;locus_tag=CCO47_RS13045;product=PhoPQ-activated DMT family transporter PagO;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2670870 2671028 . + . ID=gene-CCO47_RS13050;Name=CCO47_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13050;old_locus_tag=CCO47_13050 NZ_CP075113.1 Protein Homology CDS 2670870 2671028 . + 0 ID=cds-WP_000480735.1;Parent=gene-CCO47_RS13050;Dbxref=GenBank:WP_000480735.1;Name=WP_000480735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460819.1;locus_tag=CCO47_RS13050;product=DUF5993 family protein;protein_id=WP_000480735.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2671038 2671652 . + . ID=gene-CCO47_RS13055;Name=CCO47_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13055;old_locus_tag=CCO47_13055 NZ_CP075113.1 Protein Homology CDS 2671038 2671652 . + 0 ID=cds-WP_000848073.1;Parent=gene-CCO47_RS13055;Dbxref=GenBank:WP_000848073.1;Name=WP_000848073.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460820.1;locus_tag=CCO47_RS13055;product=disulfide bond formation protein B;protein_id=WP_000848073.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2671979 2672125 . - . ID=gene-CCO47_RS24435;Name=CCO47_RS24435;end_range=2672125,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24435;old_locus_tag=CCO47_13060;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 2671979 2672125 . - 0 ID=cds-CCO47_RS24435;Parent=gene-CCO47_RS24435;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=2672125,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219268.1;locus_tag=CCO47_RS24435;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2672140 2672286 . + . ID=gene-CCO47_RS24440;Name=CCO47_RS24440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24440;old_locus_tag=CCO47_13065 NZ_CP075113.1 GeneMarkS-2+ CDS 2672140 2672286 . + 0 ID=cds-WP_001520350.1;Parent=gene-CCO47_RS24440;Dbxref=GenBank:WP_001520350.1;Name=WP_001520350.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO47_RS24440;product=hypothetical protein;protein_id=WP_001520350.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2672800 2672925 . - . ID=gene-CCO47_RS13070;Name=CCO47_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13070;old_locus_tag=CCO47_13070 NZ_CP075113.1 Protein Homology CDS 2672800 2672925 . - 0 ID=cds-WP_001574229.1;Parent=gene-CCO47_RS13070;Dbxref=GenBank:WP_001574229.1;Name=WP_001574229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457876.1;locus_tag=CCO47_RS13070;product=hypothetical protein;protein_id=WP_001574229.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2672916 2673116 . + . ID=gene-CCO47_RS24185;Name=CCO47_RS24185;end_range=2673116,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24185;partial=true;pseudo=true;start_range=.,2672916 NZ_CP075113.1 Protein Homology CDS 2672916 2673116 . + 0 ID=cds-CCO47_RS24185;Parent=gene-CCO47_RS24185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2673116,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=CCO47_RS24185;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,2672916;transl_table=11 NZ_CP075113.1 RefSeq gene 2673493 2673693 . + . ID=gene-CCO47_RS13075;Name=pagK;gbkey=Gene;gene=pagK;gene_biotype=protein_coding;gene_synonym=pagK1;locus_tag=CCO47_RS13075;old_locus_tag=CCO47_13075 NZ_CP075113.1 Protein Homology CDS 2673493 2673693 . + 0 ID=cds-WP_001751604.1;Parent=gene-CCO47_RS13075;Dbxref=GenBank:WP_001751604.1;Name=WP_001751604.1;gbkey=CDS;gene=pagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460822.1;locus_tag=CCO47_RS13075;product=vesicle-borne virulence factor PagK;protein_id=WP_001751604.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2673790 2674271 . - . ID=gene-CCO47_RS13080;Name=CCO47_RS13080;end_range=2674271,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS13080;old_locus_tag=CCO47_13080;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 2673790 2674271 . - 0 ID=cds-CCO47_RS13080;Parent=gene-CCO47_RS13080;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0098004;end_range=2674271,.;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461522.1;locus_tag=CCO47_RS13080;partial=true;product=tail fiber assembly protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2674250 2674623 . - . ID=gene-CCO47_RS13085;Name=CCO47_RS13085;end_range=2674623,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS13085;old_locus_tag=CCO47_13085;partial=true;pseudo=true;start_range=.,2674250 NZ_CP075113.1 Protein Homology CDS 2674250 2674623 . - 0 ID=cds-CCO47_RS13085;Parent=gene-CCO47_RS13085;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2674623,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461523.1;locus_tag=CCO47_RS13085;partial=true;product=macro domain-containing protein;pseudo=true;start_range=.,2674250;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2674615 2674839 . - . ID=gene-CCO47_RS24445;Name=CCO47_RS24445;end_range=2674839,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24445;partial=true;pseudo=true;start_range=.,2674615 NZ_CP075113.1 Protein Homology CDS 2674615 2674839 . - 0 ID=cds-CCO47_RS24445;Parent=gene-CCO47_RS24445;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2674839,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461524.1;locus_tag=CCO47_RS24445;partial=true;product=tail fiber protein;pseudo=true;start_range=.,2674615;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2674832 2675092 . - . ID=gene-CCO47_RS13090;Name=CCO47_RS13090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS13090;old_locus_tag=CCO47_13090;partial=true;pseudo=true;start_range=.,2674832 NZ_CP075113.1 Protein Homology CDS 2674832 2675092 . - 0 ID=cds-CCO47_RS13090;Parent=gene-CCO47_RS13090;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459886.1;locus_tag=CCO47_RS13090;partial=true;product=DUF1441 family protein;pseudo=true;start_range=.,2674832;transl_table=11 NZ_CP075113.1 RefSeq gene 2675147 2675338 . + . ID=gene-CCO47_RS13095;Name=CCO47_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13095;old_locus_tag=CCO47_13095 NZ_CP075113.1 Protein Homology CDS 2675147 2675338 . + 0 ID=cds-WP_001034751.1;Parent=gene-CCO47_RS13095;Dbxref=GenBank:WP_001034751.1;Name=WP_001034751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537366.1;locus_tag=CCO47_RS13095;product=hypothetical protein;protein_id=WP_001034751.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2675403 2675570 . + . ID=gene-CCO47_RS13100;Name=CCO47_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13100;old_locus_tag=CCO47_13100 NZ_CP075113.1 Protein Homology CDS 2675403 2675570 . + 0 ID=cds-WP_000789530.1;Parent=gene-CCO47_RS13100;Dbxref=GenBank:WP_000789530.1;Name=WP_000789530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460824.1;locus_tag=CCO47_RS13100;product=lytic enzyme;protein_id=WP_000789530.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2675827 2676360 . - . ID=gene-CCO47_RS13105;Name=CCO47_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13105;old_locus_tag=CCO47_13105 NZ_CP075113.1 Protein Homology CDS 2675827 2676360 . - 0 ID=cds-WP_000055326.1;Parent=gene-CCO47_RS13105;Dbxref=GenBank:WP_000055326.1;Name=WP_000055326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460825.1;locus_tag=CCO47_RS13105;product=DUF2514 domain-containing protein;protein_id=WP_000055326.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2676357 2676605 . - . ID=gene-CCO47_RS13110;Name=CCO47_RS13110;end_range=2676605,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS13110;old_locus_tag=CCO47_13110;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 2676357 2676605 . - 0 ID=cds-CCO47_RS13110;Parent=gene-CCO47_RS13110;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2676605,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459884.1;locus_tag=CCO47_RS13110;partial=true;product=glycoside hydrolase family 19 protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2676744 2677748 . + . ID=gene-CCO47_RS13115;Name=CCO47_RS13115;end_range=2677748,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS13115;old_locus_tag=CCO47_13115;partial=true;pseudo=true;start_range=.,2676744 NZ_CP075113.1 Protein Homology CDS 2676744 2677748 . + 0 ID=cds-CCO47_RS13115;Parent=gene-CCO47_RS13115;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004527;end_range=2677748,.;gbkey=CDS;go_function=exonuclease activity|0004527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023732.1;locus_tag=CCO47_RS13115;partial=true;product=exonuclease family protein;pseudo=true;start_range=.,2676744;transl_table=11 NZ_CP075113.1 RefSeq gene 2677778 2678857 . + . ID=gene-CCO47_RS13120;Name=CCO47_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13120;old_locus_tag=CCO47_13120 NZ_CP075113.1 Protein Homology CDS 2677778 2678857 . + 0 ID=cds-WP_076097973.1;Parent=gene-CCO47_RS13120;Dbxref=GenBank:WP_076097973.1;Name=WP_076097973.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=CCO47_RS13120;product=tyrosine-type recombinase/integrase;protein_id=WP_076097973.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2679811 2680611 . + . ID=gene-CCO47_RS13125;Name=CCO47_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13125;old_locus_tag=CCO47_13125 NZ_CP075113.1 Protein Homology CDS 2679811 2680611 . + 0 ID=cds-WP_001536069.1;Parent=gene-CCO47_RS13125;Dbxref=GenBank:WP_001536069.1;Name=WP_001536069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586172.1;locus_tag=CCO47_RS13125;product=hypothetical protein;protein_id=WP_001536069.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2680640 2680881 . - . ID=gene-CCO47_RS13130;Name=CCO47_RS13130;end_range=2680881,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS13130;old_locus_tag=CCO47_13130;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 2680640 2680881 . - 0 ID=cds-CCO47_RS13130;Parent=gene-CCO47_RS13130;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=2680881,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465755.1;locus_tag=CCO47_RS13130;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2681091 2681813 . + . ID=gene-CCO47_RS13135;Name=sopE;gbkey=Gene;gene=sopE;gene_biotype=protein_coding;locus_tag=CCO47_RS13135;old_locus_tag=CCO47_13135 NZ_CP075113.1 Protein Homology CDS 2681091 2681813 . + 0 ID=cds-WP_000161701.1;Parent=gene-CCO47_RS13135;Dbxref=GenBank:WP_000161701.1;Name=WP_000161701.1;gbkey=CDS;gene=sopE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000161707.1;locus_tag=CCO47_RS13135;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE;protein_id=WP_000161701.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2682015 2682584 . - . ID=gene-CCO47_RS13140;Name=CCO47_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13140;old_locus_tag=CCO47_13140 NZ_CP075113.1 Protein Homology CDS 2682015 2682584 . - 0 ID=cds-WP_000143180.1;Parent=gene-CCO47_RS13140;Dbxref=GenBank:WP_000143180.1;Name=WP_000143180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143180.1;locus_tag=CCO47_RS13140;product=tail fiber assembly protein;protein_id=WP_000143180.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2682584 2685001 . - . ID=gene-CCO47_RS13145;Name=CCO47_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13145;old_locus_tag=CCO47_13145 NZ_CP075113.1 Protein Homology CDS 2682584 2685001 . - 0 ID=cds-WP_001574223.1;Parent=gene-CCO47_RS13145;Dbxref=GenBank:WP_001574223.1;Name=WP_001574223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460024.1;locus_tag=CCO47_RS13145;product=phage tail protein;protein_id=WP_001574223.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2685055 2685297 . - . ID=gene-CCO47_RS13150;Name=CCO47_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13150;old_locus_tag=CCO47_13150 NZ_CP075113.1 Protein Homology CDS 2685055 2685297 . - 0 ID=cds-WP_000178848.1;Parent=gene-CCO47_RS13150;Dbxref=GenBank:WP_000178848.1;Name=WP_000178848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178849.1;locus_tag=CCO47_RS13150;product=hypothetical protein;protein_id=WP_000178848.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2685336 2686199 . - . ID=gene-CCO47_RS13155;Name=CCO47_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13155;old_locus_tag=CCO47_13155 NZ_CP075113.1 Protein Homology CDS 2685336 2686199 . - 0 ID=cds-WP_072100756.1;Parent=gene-CCO47_RS13155;Dbxref=GenBank:WP_072100756.1;Name=WP_072100756.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020885.6;locus_tag=CCO47_RS13155;product=phage tail tip fiber protein;protein_id=WP_072100756.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2686239 2688688 . - . ID=gene-CCO47_RS13160;Name=CCO47_RS13160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS13160;old_locus_tag=CCO47_13160;pseudo=true NZ_CP075113.1 Protein Homology CDS 2686239 2688688 . - 0 ID=cds-CCO47_RS13160;Parent=gene-CCO47_RS13160;Note=frameshifted;Ontology_term=GO:0019062,GO:0046813,GO:0098003,GO:0005515,GO:0098015;gbkey=CDS;go_component=virus tail|0098015||IEA;go_function=protein binding|0005515||IEA;go_process=virion attachment to host cell|0019062||IEA,receptor-mediated virion attachment to host cell|0046813||IEA,viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460023.1;locus_tag=CCO47_RS13160;product=TipJ family phage tail tip protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2688760 2689464 . - . ID=gene-CCO47_RS13165;Name=CCO47_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13165;old_locus_tag=CCO47_13165 NZ_CP075113.1 Protein Homology CDS 2688760 2689464 . - 0 ID=cds-WP_001576012.1;Parent=gene-CCO47_RS13165;Dbxref=GenBank:WP_001576012.1;Name=WP_001576012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460022.1;locus_tag=CCO47_RS13165;product=tail assembly protein;protein_id=WP_001576012.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2689368 2690099 . - . ID=gene-CCO47_RS13170;Name=CCO47_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13170;old_locus_tag=CCO47_13170 NZ_CP075113.1 Protein Homology CDS 2689368 2690099 . - 0 ID=cds-WP_000606352.1;Parent=gene-CCO47_RS13170;Dbxref=GenBank:WP_000606352.1;Name=WP_000606352.1;Ontology_term=GO:0006508,GO:0008234,GO:0008235,GO:0008270;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000606352.1;locus_tag=CCO47_RS13170;product=C40 family peptidase;protein_id=WP_000606352.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2690109 2690804 . - . ID=gene-CCO47_RS13175;Name=CCO47_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13175;old_locus_tag=CCO47_13175 NZ_CP075113.1 Protein Homology CDS 2690109 2690804 . - 0 ID=cds-WP_001152416.1;Parent=gene-CCO47_RS13175;Dbxref=GenBank:WP_001152416.1;Name=WP_001152416.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460020.1;locus_tag=CCO47_RS13175;product=phage minor tail protein L;protein_id=WP_001152416.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2690894 2691427 . + . ID=gene-CCO47_RS13180;Name=sodC1;gbkey=Gene;gene=sodC1;gene_biotype=protein_coding;gene_synonym=sodCI;locus_tag=CCO47_RS13180;old_locus_tag=CCO47_13180 NZ_CP075113.1 Protein Homology CDS 2690894 2691427 . + 0 ID=cds-WP_000877926.1;Parent=gene-CCO47_RS13180;Dbxref=GenBank:WP_000877926.1;Name=WP_000877926.1;gbkey=CDS;gene=sodC1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460019.1;locus_tag=CCO47_RS13180;product=superoxide dismutase [Cu-Zn] SodC1;protein_id=WP_000877926.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2691544 2692041 . - . ID=gene-CCO47_RS13185;Name=CCO47_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13185;old_locus_tag=CCO47_13185 NZ_CP075113.1 Protein Homology CDS 2691544 2692041 . - 0 ID=cds-WP_000725268.1;Parent=gene-CCO47_RS13185;Dbxref=GenBank:WP_000725268.1;Name=WP_000725268.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410972.1;locus_tag=CCO47_RS13185;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_000725268.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2692140 2692472 . - . ID=gene-CCO47_RS13190;Name=CCO47_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13190;old_locus_tag=CCO47_13190 NZ_CP075113.1 Protein Homology CDS 2692140 2692472 . - 0 ID=cds-WP_000978295.1;Parent=gene-CCO47_RS13190;Dbxref=GenBank:WP_000978295.1;Name=WP_000978295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460017.1;locus_tag=CCO47_RS13190;product=phage tail protein;protein_id=WP_000978295.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2692469 2695456 . - . ID=gene-CCO47_RS13195;Name=CCO47_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13195;old_locus_tag=CCO47_13195 NZ_CP075113.1 Protein Homology CDS 2692469 2695456 . - 0 ID=cds-WP_077906652.1;Parent=gene-CCO47_RS13195;Dbxref=GenBank:WP_077906652.1;Name=WP_077906652.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460016.1;locus_tag=CCO47_RS13195;product=phage tail tape measure protein;protein_id=WP_077906652.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2695536 2695865 . - . ID=gene-CCO47_RS13200;Name=CCO47_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13200;old_locus_tag=CCO47_13200 NZ_CP075113.1 Protein Homology CDS 2695536 2695865 . - 0 ID=cds-WP_010989009.1;Parent=gene-CCO47_RS13200;Dbxref=GenBank:WP_010989009.1;Name=WP_010989009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460015.1;locus_tag=CCO47_RS13200;product=phage tail assembly protein T;protein_id=WP_010989009.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2695862 2696260 . - . ID=gene-CCO47_RS13205;Name=gpG;gbkey=Gene;gene=gpG;gene_biotype=protein_coding;locus_tag=CCO47_RS13205;old_locus_tag=CCO47_13205 NZ_CP075113.1 Protein Homology CDS 2695862 2696260 . - 0 ID=cds-WP_000478858.1;Parent=gene-CCO47_RS13205;Dbxref=GenBank:WP_000478858.1;Name=WP_000478858.1;gbkey=CDS;gene=gpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460014.1;locus_tag=CCO47_RS13205;product=phage tail assembly chaperone G;protein_id=WP_000478858.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2696306 2697055 . - . ID=gene-CCO47_RS13210;Name=CCO47_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13210;old_locus_tag=CCO47_13210 NZ_CP075113.1 Protein Homology CDS 2696306 2697055 . - 0 ID=cds-WP_000132757.1;Parent=gene-CCO47_RS13210;Dbxref=GenBank:WP_000132757.1;Name=WP_000132757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460013.1;locus_tag=CCO47_RS13210;product=phage tail protein;protein_id=WP_000132757.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2697067 2697468 . - . ID=gene-CCO47_RS13215;Name=CCO47_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13215;old_locus_tag=CCO47_13215 NZ_CP075113.1 Protein Homology CDS 2697067 2697468 . - 0 ID=cds-WP_000196703.1;Parent=gene-CCO47_RS13215;Dbxref=GenBank:WP_000196703.1;Name=WP_000196703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460012.1;locus_tag=CCO47_RS13215;product=phage minor tail U family protein;protein_id=WP_000196703.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2697465 2698031 . - . ID=gene-CCO47_RS13220;Name=CCO47_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13220;old_locus_tag=CCO47_13220 NZ_CP075113.1 Protein Homology CDS 2697465 2698031 . - 0 ID=cds-WP_000453192.1;Parent=gene-CCO47_RS13220;Dbxref=GenBank:WP_000453192.1;Name=WP_000453192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460011.1;locus_tag=CCO47_RS13220;product=phage tail protein;protein_id=WP_000453192.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2698012 2698311 . - . ID=gene-CCO47_RS13225;Name=CCO47_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13225;old_locus_tag=CCO47_13225 NZ_CP075113.1 Protein Homology CDS 2698012 2698311 . - 0 ID=cds-WP_000774239.1;Parent=gene-CCO47_RS13225;Dbxref=GenBank:WP_000774239.1;Name=WP_000774239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460010.1;locus_tag=CCO47_RS13225;product=ATP-binding protein;protein_id=WP_000774239.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2698304 2698627 . - . ID=gene-CCO47_RS13230;Name=CCO47_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13230;old_locus_tag=CCO47_13230 NZ_CP075113.1 Protein Homology CDS 2698304 2698627 . - 0 ID=cds-WP_001107908.1;Parent=gene-CCO47_RS13230;Dbxref=GenBank:WP_001107908.1;Name=WP_001107908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460009.1;locus_tag=CCO47_RS13230;product=DUF2190 family protein;protein_id=WP_001107908.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2698718 2700799 . - . ID=gene-CCO47_RS13235;Name=CCO47_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13235;old_locus_tag=CCO47_13235 NZ_CP075113.1 Protein Homology CDS 2698718 2700799 . - 0 ID=cds-WP_010989008.1;Parent=gene-CCO47_RS13235;Dbxref=GenBank:WP_010989008.1;Name=WP_010989008.1;Ontology_term=GO:0019082,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460008.1;locus_tag=CCO47_RS13235;product=ClpP-like prohead protease/major capsid protein fusion protein;protein_id=WP_010989008.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2700723 2702270 . - . ID=gene-CCO47_RS13240;Name=CCO47_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13240;old_locus_tag=CCO47_13240 NZ_CP075113.1 Protein Homology CDS 2700723 2702270 . - 0 ID=cds-WP_001009211.1;Parent=gene-CCO47_RS13240;Dbxref=GenBank:WP_001009211.1;Name=WP_001009211.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001009205.1;locus_tag=CCO47_RS13240;product=phage portal protein;protein_id=WP_001009211.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2702267 2702473 . - . ID=gene-CCO47_RS13245;Name=CCO47_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13245;old_locus_tag=CCO47_13245 NZ_CP075113.1 Protein Homology CDS 2702267 2702473 . - 0 ID=cds-WP_000196190.1;Parent=gene-CCO47_RS13245;Dbxref=GenBank:WP_000196190.1;Name=WP_000196190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000196190.1;locus_tag=CCO47_RS13245;product=DUF6148 family protein;protein_id=WP_000196190.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2702470 2704608 . - . ID=gene-CCO47_RS13250;Name=CCO47_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13250;old_locus_tag=CCO47_13250 NZ_CP075113.1 Protein Homology CDS 2702470 2704608 . - 0 ID=cds-WP_000989241.1;Parent=gene-CCO47_RS13250;Dbxref=GenBank:WP_000989241.1;Name=WP_000989241.1;Ontology_term=GO:0004519,GO:0005524,GO:0016887;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460006.1;locus_tag=CCO47_RS13250;product=phage terminase large subunit family protein;protein_id=WP_000989241.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2704565 2705098 . - . ID=gene-CCO47_RS13255;Name=CCO47_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13255;old_locus_tag=CCO47_13255 NZ_CP075113.1 Protein Homology CDS 2704565 2705098 . - 0 ID=cds-WP_000371784.1;Parent=gene-CCO47_RS13255;Dbxref=GenBank:WP_000371784.1;Name=WP_000371784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460005.1;locus_tag=CCO47_RS13255;product=DUF1441 family protein;protein_id=WP_000371784.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2705306 2705785 . - . ID=gene-CCO47_RS13260;Name=CCO47_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13260;old_locus_tag=CCO47_13260 NZ_CP075113.1 Protein Homology CDS 2705306 2705785 . - 0 ID=cds-WP_001541990.1;Parent=gene-CCO47_RS13260;Dbxref=GenBank:WP_001541990.1;Name=WP_001541990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460004.1;locus_tag=CCO47_RS13260;product=lysis protein;protein_id=WP_001541990.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2705803 2706255 . - . ID=gene-CCO47_RS13265;Name=CCO47_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13265;old_locus_tag=CCO47_13265 NZ_CP075113.1 Protein Homology CDS 2705803 2706255 . - 0 ID=cds-WP_000984586.1;Parent=gene-CCO47_RS13265;Dbxref=GenBank:WP_000984586.1;Name=WP_000984586.1;Ontology_term=GO:0009253,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460003.1;locus_tag=CCO47_RS13265;product=lysozyme;protein_id=WP_000984586.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2706239 2706568 . - . ID=gene-CCO47_RS13270;Name=CCO47_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13270;old_locus_tag=CCO47_13270 NZ_CP075113.1 Protein Homology CDS 2706239 2706568 . - 0 ID=cds-WP_001574216.1;Parent=gene-CCO47_RS13270;Dbxref=GenBank:WP_001574216.1;Name=WP_001574216.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461549.1;locus_tag=CCO47_RS13270;product=phage holin%2C lambda family;protein_id=WP_001574216.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2706844 2707530 . + . ID=gene-CCO47_RS13275;Name=gtgA;gbkey=Gene;gene=gtgA;gene_biotype=protein_coding;locus_tag=CCO47_RS13275;old_locus_tag=CCO47_13275 NZ_CP075113.1 Protein Homology CDS 2706844 2707530 . + 0 ID=cds-WP_001574215.1;Parent=gene-CCO47_RS13275;Dbxref=GenBank:WP_001574215.1;Name=WP_001574215.1;gbkey=CDS;gene=gtgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461550.1;locus_tag=CCO47_RS13275;product=type III secretion system effector protease GtgA;protein_id=WP_001574215.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2707891 2708340 . + . ID=gene-CCO47_RS13280;Name=CCO47_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13280;old_locus_tag=CCO47_13280 NZ_CP075113.1 Protein Homology CDS 2707891 2708340 . + 0 ID=cds-WP_000798708.1;Parent=gene-CCO47_RS13280;Dbxref=GenBank:WP_000798708.1;Name=WP_000798708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460000.1;locus_tag=CCO47_RS13280;product=hypothetical protein;protein_id=WP_000798708.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2708714 2709238 . - . ID=gene-CCO47_RS13285;Name=CCO47_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13285;old_locus_tag=CCO47_13285 NZ_CP075113.1 Protein Homology CDS 2708714 2709238 . - 0 ID=cds-WP_001574213.1;Parent=gene-CCO47_RS13285;Dbxref=GenBank:WP_001574213.1;Name=WP_001574213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574213.1;locus_tag=CCO47_RS13285;product=hypothetical protein;protein_id=WP_001574213.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2709335 2709982 . - . ID=gene-CCO47_RS13290;Name=CCO47_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13290;old_locus_tag=CCO47_13290 NZ_CP075113.1 Protein Homology CDS 2709335 2709982 . - 0 ID=cds-WP_001097219.1;Parent=gene-CCO47_RS13290;Dbxref=GenBank:WP_001097219.1;Name=WP_001097219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001097218.1;locus_tag=CCO47_RS13290;product=bacteriophage antitermination protein Q;protein_id=WP_001097219.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2709979 2710062 . - . ID=gene-CCO47_RS24450;Name=CCO47_RS24450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24450 NZ_CP075113.1 Protein Homology CDS 2709979 2710062 . - 0 ID=cds-WP_012539865.1;Parent=gene-CCO47_RS24450;Dbxref=GenBank:WP_012539865.1;Name=WP_012539865.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033498.1;locus_tag=CCO47_RS24450;product=YlcG family protein;protein_id=WP_012539865.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2710112 2710258 . - . ID=gene-CCO47_RS24190;Name=CCO47_RS24190;end_range=2710258,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24190;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 2710112 2710258 . - 0 ID=cds-CCO47_RS24190;Parent=gene-CCO47_RS24190;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2710258,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461554.1;locus_tag=CCO47_RS24190;partial=true;product=recombination protein NinG;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2710336 2710935 . - . ID=gene-CCO47_RS13305;Name=CCO47_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13305;old_locus_tag=CCO47_13305 NZ_CP075113.1 Protein Homology CDS 2710336 2710935 . - 0 ID=cds-WP_000940753.1;Parent=gene-CCO47_RS13305;Dbxref=GenBank:WP_000940753.1;Name=WP_000940753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707250.1;locus_tag=CCO47_RS13305;product=DUF1367 family protein;protein_id=WP_000940753.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2710999 2711247 . - . ID=gene-CCO47_RS13310;Name=CCO47_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13310;old_locus_tag=CCO47_13310 NZ_CP075113.1 Protein Homology CDS 2710999 2711247 . - 0 ID=cds-WP_000911593.1;Parent=gene-CCO47_RS13310;Dbxref=GenBank:WP_000911593.1;Name=WP_000911593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000911590.1;locus_tag=CCO47_RS13310;product=hypothetical protein;protein_id=WP_000911593.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2711519 2711617 . - . ID=gene-CCO47_RS24195;Name=CCO47_RS24195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24195 NZ_CP075113.1 Protein Homology CDS 2711519 2711617 . - 0 ID=cds-WP_223151200.1;Parent=gene-CCO47_RS24195;Dbxref=GenBank:WP_223151200.1;Name=WP_223151200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000813257.1;locus_tag=CCO47_RS24195;product=hypothetical protein;protein_id=WP_223151200.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2711936 2713915 . - . ID=gene-CCO47_RS13320;Name=CCO47_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13320;old_locus_tag=CCO47_13320 NZ_CP075113.1 Protein Homology CDS 2711936 2713915 . - 0 ID=cds-WP_001237395.1;Parent=gene-CCO47_RS13320;Dbxref=GenBank:WP_001237395.1;Name=WP_001237395.1;Ontology_term=GO:0008484,GO:0046872,GO:0046983;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078314.1;locus_tag=CCO47_RS13320;product=alkyl/aryl-sulfatase;protein_id=WP_001237395.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2714312 2715442 . + . ID=gene-CCO47_RS13325;Name=CCO47_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13325;old_locus_tag=CCO47_13325 NZ_CP075113.1 Protein Homology CDS 2714312 2715442 . + 0 ID=cds-WP_000529512.1;Parent=gene-CCO47_RS13325;Dbxref=GenBank:WP_000529512.1;Name=WP_000529512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529511.1;locus_tag=CCO47_RS13325;product=GGDEF domain-containing protein;protein_id=WP_000529512.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2715729 2716124 . - . ID=gene-CCO47_RS13330;Name=CCO47_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13330;old_locus_tag=CCO47_13330 NZ_CP075113.1 Protein Homology CDS 2715729 2716124 . - 0 ID=cds-WP_000089417.1;Parent=gene-CCO47_RS13330;Dbxref=GenBank:WP_000089417.1;Name=WP_000089417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089414.1;locus_tag=CCO47_RS13330;product=DUF977 family protein;protein_id=WP_000089417.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2716137 2716679 . - . ID=gene-CCO47_RS13335;Name=CCO47_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13335;old_locus_tag=CCO47_13335 NZ_CP075113.1 Protein Homology CDS 2716137 2716679 . - 0 ID=cds-WP_158000546.1;Parent=gene-CCO47_RS13335;Dbxref=GenBank:WP_158000546.1;Name=WP_158000546.1;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001307798.1;locus_tag=CCO47_RS13335;product=replication protein P;protein_id=WP_158000546.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2716591 2717589 . - . ID=gene-CCO47_RS13340;Name=CCO47_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13340;old_locus_tag=CCO47_13340 NZ_CP075113.1 Protein Homology CDS 2716591 2717589 . - 0 ID=cds-WP_000729536.1;Parent=gene-CCO47_RS13340;Dbxref=GenBank:WP_000729536.1;Name=WP_000729536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729543.1;locus_tag=CCO47_RS13340;product=DUF1376 domain-containing protein;protein_id=WP_000729536.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2717636 2718130 . - . ID=gene-CCO47_RS13345;Name=CCO47_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13345;old_locus_tag=CCO47_13345 NZ_CP075113.1 Protein Homology CDS 2717636 2718130 . - 0 ID=cds-WP_001574210.1;Parent=gene-CCO47_RS13345;Dbxref=GenBank:WP_001574210.1;Name=WP_001574210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533160.1;locus_tag=CCO47_RS13345;product=toxin YdaT family protein;protein_id=WP_001574210.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2718117 2718371 . - . ID=gene-CCO47_RS13350;Name=CCO47_RS13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13350;old_locus_tag=CCO47_13350 NZ_CP075113.1 Protein Homology CDS 2718117 2718371 . - 0 ID=cds-WP_001033912.1;Parent=gene-CCO47_RS13350;Dbxref=GenBank:WP_001033912.1;Name=WP_001033912.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF013540.7;locus_tag=CCO47_RS13350;product=helix-turn-helix domain-containing protein;protein_id=WP_001033912.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2718470 2718868 . + . ID=gene-CCO47_RS13355;Name=CCO47_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13355;old_locus_tag=CCO47_13355 NZ_CP075113.1 Protein Homology CDS 2718470 2718868 . + 0 ID=cds-WP_001574209.1;Parent=gene-CCO47_RS13355;Dbxref=GenBank:WP_001574209.1;Name=WP_001574209.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574209.1;locus_tag=CCO47_RS13355;product=helix-turn-helix domain-containing protein;protein_id=WP_001574209.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2719310 2719624 . - . ID=gene-CCO47_RS13360;Name=CCO47_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13360;old_locus_tag=CCO47_13360 NZ_CP075113.1 Protein Homology CDS 2719310 2719624 . - 0 ID=cds-WP_071591195.1;Parent=gene-CCO47_RS13360;Dbxref=GenBank:WP_071591195.1;Name=WP_071591195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000188912.1;locus_tag=CCO47_RS13360;product=hypothetical protein;protein_id=WP_071591195.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2719886 2720161 . + . ID=gene-CCO47_RS13365;Name=CCO47_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13365;old_locus_tag=CCO47_13365 NZ_CP075113.1 Protein Homology CDS 2719886 2720161 . + 0 ID=cds-WP_000103933.1;Parent=gene-CCO47_RS13365;Dbxref=GenBank:WP_000103933.1;Name=WP_000103933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000103933.1;locus_tag=CCO47_RS13365;product=hypothetical protein;protein_id=WP_000103933.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2720165 2720371 . + . ID=gene-CCO47_RS13370;Name=CCO47_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13370;old_locus_tag=CCO47_13370 NZ_CP075113.1 Protein Homology CDS 2720165 2720371 . + 0 ID=cds-WP_000682660.1;Parent=gene-CCO47_RS13370;Dbxref=GenBank:WP_000682660.1;Name=WP_000682660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000682660.1;locus_tag=CCO47_RS13370;product=cell division inhibitor protein;protein_id=WP_000682660.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2720447 2720782 . + . ID=gene-CCO47_RS13375;Name=CCO47_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13375;old_locus_tag=CCO47_13375 NZ_CP075113.1 Protein Homology CDS 2720447 2720782 . + 0 ID=cds-WP_000799627.1;Parent=gene-CCO47_RS13375;Dbxref=GenBank:WP_000799627.1;Name=WP_000799627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799630.1;locus_tag=CCO47_RS13375;product=hypothetical protein;protein_id=WP_000799627.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2720923 2723613 . + . ID=gene-CCO47_RS13380;Name=recE;gbkey=Gene;gene=recE;gene_biotype=protein_coding;locus_tag=CCO47_RS13380;old_locus_tag=CCO47_13380 NZ_CP075113.1 Protein Homology CDS 2720923 2723613 . + 0 ID=cds-WP_000023732.1;Parent=gene-CCO47_RS13380;Dbxref=GenBank:WP_000023732.1;Name=WP_000023732.1;Ontology_term=GO:0090304,GO:0051908;gbkey=CDS;gene=recE;go_function=double-stranded DNA 5'-3' DNA exonuclease activity|0051908||IEA;go_process=nucleic acid metabolic process|0090304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023732.1;locus_tag=CCO47_RS13380;product=exodeoxyribonuclease VIII;protein_id=WP_000023732.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2723606 2724436 . + . ID=gene-CCO47_RS13385;Name=recT;gbkey=Gene;gene=recT;gene_biotype=protein_coding;locus_tag=CCO47_RS13385;old_locus_tag=CCO47_13385 NZ_CP075113.1 Protein Homology CDS 2723606 2724436 . + 0 ID=cds-WP_001126030.1;Parent=gene-CCO47_RS13385;Dbxref=GenBank:WP_001126030.1;Name=WP_001126030.1;Ontology_term=GO:0006259,GO:0003677;gbkey=CDS;gene=recT;go_function=DNA binding|0003677||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001126028.1;locus_tag=CCO47_RS13385;product=recombination protein RecT;protein_id=WP_001126030.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2724483 2724668 . + . ID=gene-CCO47_RS13390;Name=CCO47_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13390;old_locus_tag=CCO47_13390 NZ_CP075113.1 Protein Homology CDS 2724483 2724668 . + 0 ID=cds-WP_000280163.1;Parent=gene-CCO47_RS13390;Dbxref=GenBank:WP_000280163.1;Name=WP_000280163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280163.1;locus_tag=CCO47_RS13390;product=DUF1187 family protein;protein_id=WP_000280163.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2724767 2725195 . + . ID=gene-CCO47_RS13395;Name=CCO47_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13395;old_locus_tag=CCO47_13395 NZ_CP075113.1 Protein Homology CDS 2724767 2725195 . + 0 ID=cds-WP_000743301.1;Parent=gene-CCO47_RS13395;Dbxref=GenBank:WP_000743301.1;Name=WP_000743301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000743304.1;locus_tag=CCO47_RS13395;product=hypothetical protein;protein_id=WP_000743301.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2725256 2725534 . + . ID=gene-CCO47_RS13400;Name=CCO47_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13400;old_locus_tag=CCO47_13400 NZ_CP075113.1 Protein Homology CDS 2725256 2725534 . + 0 ID=cds-WP_001675651.1;Parent=gene-CCO47_RS13400;Dbxref=GenBank:WP_001675651.1;Name=WP_001675651.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575998.1;locus_tag=CCO47_RS13400;product=excisionase;protein_id=WP_001675651.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2725509 2726588 . + . ID=gene-CCO47_RS13405;Name=CCO47_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13405;old_locus_tag=CCO47_13405 NZ_CP075113.1 Protein Homology CDS 2725509 2726588 . + 0 ID=cds-WP_076031669.1;Parent=gene-CCO47_RS13405;Dbxref=GenBank:WP_076031669.1;Name=WP_076031669.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=CCO47_RS13405;product=tyrosine-type recombinase/integrase;protein_id=WP_076031669.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2726971 2727324 . - . ID=gene-CCO47_RS13410;Name=CCO47_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13410;old_locus_tag=CCO47_13410 NZ_CP075113.1 Protein Homology CDS 2726971 2727324 . - 0 ID=cds-WP_000722372.1;Parent=gene-CCO47_RS13410;Dbxref=GenBank:WP_000722372.1;Name=WP_000722372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460830.1;locus_tag=CCO47_RS13410;product=YebY family protein;protein_id=WP_000722372.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2727341 2728216 . - . ID=gene-CCO47_RS13415;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=CCO47_RS13415;old_locus_tag=CCO47_13415 NZ_CP075113.1 Protein Homology CDS 2727341 2728216 . - 0 ID=cds-WP_094912438.1;Parent=gene-CCO47_RS13415;Dbxref=GenBank:WP_094912438.1;Name=WP_094912438.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460831.1;locus_tag=CCO47_RS13415;product=copper homeostasis membrane protein CopD;protein_id=WP_094912438.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2728217 2728591 . - . ID=gene-CCO47_RS13420;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=CCO47_RS13420;old_locus_tag=CCO47_13420 NZ_CP075113.1 Protein Homology CDS 2728217 2728591 . - 0 ID=cds-WP_000168392.1;Parent=gene-CCO47_RS13420;Dbxref=GenBank:WP_000168392.1;Name=WP_000168392.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=CCO47_RS13420;product=CopC domain-containing protein YobA;protein_id=WP_000168392.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2728729 2728959 . + . ID=gene-CCO47_RS13425;Name=CCO47_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13425;old_locus_tag=CCO47_13425 NZ_CP075113.1 Protein Homology CDS 2728729 2728959 . + 0 ID=cds-WP_000856224.1;Parent=gene-CCO47_RS13425;Dbxref=GenBank:WP_000856224.1;Name=WP_000856224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460833.1;locus_tag=CCO47_RS13425;product=DNA polymerase III subunit theta;protein_id=WP_000856224.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2729067 2729723 . + . ID=gene-CCO47_RS13430;Name=CCO47_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13430;old_locus_tag=CCO47_13430 NZ_CP075113.1 Protein Homology CDS 2729067 2729723 . + 0 ID=cds-WP_000100257.1;Parent=gene-CCO47_RS13430;Dbxref=GenBank:WP_000100257.1;Name=WP_000100257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460834.1;locus_tag=CCO47_RS13430;product=carbon-nitrogen hydrolase family protein;protein_id=WP_000100257.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2729747 2730445 . + . ID=gene-CCO47_RS13435;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=CCO47_RS13435;old_locus_tag=CCO47_13435 NZ_CP075113.1 Protein Homology CDS 2729747 2730445 . + 0 ID=cds-WP_000944287.1;Parent=gene-CCO47_RS13435;Dbxref=GenBank:WP_000944287.1;Name=WP_000944287.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460835.1;locus_tag=CCO47_RS13435;product=exodeoxyribonuclease X;protein_id=WP_000944287.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2730482 2732533 . - . ID=gene-CCO47_RS13440;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=CCO47_RS13440;old_locus_tag=CCO47_13440 NZ_CP075113.1 Protein Homology CDS 2730482 2732533 . - 0 ID=cds-WP_000936999.1;Parent=gene-CCO47_RS13440;Dbxref=GenBank:WP_000936999.1;Name=WP_000936999.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460836.1;locus_tag=CCO47_RS13440;product=oligopeptidase B;protein_id=WP_000936999.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2732746 2733405 . - . ID=gene-CCO47_RS13445;Name=CCO47_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13445;old_locus_tag=CCO47_13445 NZ_CP075113.1 Protein Homology CDS 2732746 2733405 . - 0 ID=cds-WP_000024709.1;Parent=gene-CCO47_RS13445;Dbxref=GenBank:WP_000024709.1;Name=WP_000024709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=CCO47_RS13445;product=tellurite resistance TerB family protein;protein_id=WP_000024709.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2733499 2733852 . - . ID=gene-CCO47_RS13450;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=CCO47_RS13450;old_locus_tag=CCO47_13450 NZ_CP075113.1 Protein Homology CDS 2733499 2733852 . - 0 ID=cds-WP_001042123.1;Parent=gene-CCO47_RS13450;Dbxref=GenBank:WP_001042123.1;Name=WP_001042123.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460838.1;locus_tag=CCO47_RS13450;product=protein YebF;protein_id=WP_001042123.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2733920 2734210 . - . ID=gene-CCO47_RS13455;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=CCO47_RS13455;old_locus_tag=CCO47_13455 NZ_CP075113.1 Protein Homology CDS 2733920 2734210 . - 0 ID=cds-WP_000257723.1;Parent=gene-CCO47_RS13455;Dbxref=GenBank:WP_000257723.1;Name=WP_000257723.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460839.1;locus_tag=CCO47_RS13455;product=DNA damage-inducible protein YebG;protein_id=WP_000257723.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2734341 2735519 . + . ID=gene-CCO47_RS13460;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=CCO47_RS13460;old_locus_tag=CCO47_13460 NZ_CP075113.1 Protein Homology CDS 2734341 2735519 . + 0 ID=cds-WP_000173430.1;Parent=gene-CCO47_RS13460;Dbxref=GenBank:WP_000173430.1;Name=WP_000173430.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460840.1;locus_tag=CCO47_RS13460;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_000173430.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2735619 2736260 . - . ID=gene-CCO47_RS13465;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=CCO47_RS13465;old_locus_tag=CCO47_13465 NZ_CP075113.1 Protein Homology CDS 2735619 2736260 . - 0 ID=cds-WP_000800494.1;Parent=gene-CCO47_RS13465;Dbxref=GenBank:WP_000800494.1;Name=WP_000800494.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=CCO47_RS13465;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000800494.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2736298 2738109 . - . ID=gene-CCO47_RS13470;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=CCO47_RS13470;old_locus_tag=CCO47_13470 NZ_CP075113.1 Protein Homology CDS 2736298 2738109 . - 0 ID=cds-WP_001069124.1;Parent=gene-CCO47_RS13470;Dbxref=GenBank:WP_001069124.1;Name=WP_001069124.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460842.1;locus_tag=CCO47_RS13470;product=phosphogluconate dehydratase;protein_id=WP_001069124.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2738344 2739819 . - . ID=gene-CCO47_RS13475;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=CCO47_RS13475;old_locus_tag=CCO47_13475 NZ_CP075113.1 Protein Homology CDS 2738344 2739819 . - 0 ID=cds-WP_000301704.1;Parent=gene-CCO47_RS13475;Dbxref=GenBank:WP_000301704.1;Name=WP_000301704.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=CCO47_RS13475;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301704.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2740161 2741030 . + . ID=gene-CCO47_RS13480;Name=CCO47_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13480;old_locus_tag=CCO47_13480 NZ_CP075113.1 Protein Homology CDS 2740161 2741030 . + 0 ID=cds-WP_001056720.1;Parent=gene-CCO47_RS13480;Dbxref=GenBank:WP_001056720.1;Name=WP_001056720.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700,GO:0097367;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,carbohydrate derivative binding|0097367||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460844.1;locus_tag=CCO47_RS13480;product=MurR/RpiR family transcriptional regulator;protein_id=WP_001056720.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2741154 2742596 . + . ID=gene-CCO47_RS13485;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=CCO47_RS13485;old_locus_tag=CCO47_13485 NZ_CP075113.1 Protein Homology CDS 2741154 2742596 . + 0 ID=cds-WP_000091156.1;Parent=gene-CCO47_RS13485;Dbxref=GenBank:WP_000091156.1;Name=WP_000091156.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=CCO47_RS13485;product=pyruvate kinase;protein_id=WP_000091156.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2742669 2743640 . - . ID=gene-CCO47_RS13490;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=CCO47_RS13490;old_locus_tag=CCO47_13490 NZ_CP075113.1 Protein Homology CDS 2742669 2743640 . - 0 ID=cds-WP_000448401.1;Parent=gene-CCO47_RS13490;Dbxref=GenBank:WP_000448401.1;Name=WP_000448401.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460846.1;locus_tag=CCO47_RS13490;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_000448401.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2743757 2745076 . - . ID=gene-CCO47_RS13495;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=CCO47_RS13495;old_locus_tag=CCO47_13495 NZ_CP075113.1 Protein Homology CDS 2743757 2745076 . - 0 ID=cds-WP_001184028.1;Parent=gene-CCO47_RS13495;Dbxref=GenBank:WP_001184028.1;Name=WP_001184028.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=CCO47_RS13495;product=murein DD-endopeptidase MepM;protein_id=WP_001184028.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2745092 2746036 . - . ID=gene-CCO47_RS13500;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=CCO47_RS13500;old_locus_tag=CCO47_13500 NZ_CP075113.1 Protein Homology CDS 2745092 2746036 . - 0 ID=cds-WP_000939597.1;Parent=gene-CCO47_RS13500;Dbxref=GenBank:WP_000939597.1;Name=WP_000939597.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=CCO47_RS13500;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_000939597.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2746115 2746870 . + . ID=gene-CCO47_RS13505;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=CCO47_RS13505;old_locus_tag=CCO47_13505 NZ_CP075113.1 Protein Homology CDS 2746115 2746870 . + 0 ID=cds-WP_000203013.1;Parent=gene-CCO47_RS13505;Dbxref=GenBank:WP_000203013.1;Name=WP_000203013.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=CCO47_RS13505;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_000203013.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2746867 2747652 . + . ID=gene-CCO47_RS13510;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=CCO47_RS13510;old_locus_tag=CCO47_13510 NZ_CP075113.1 Protein Homology CDS 2746867 2747652 . + 0 ID=cds-WP_000571508.1;Parent=gene-CCO47_RS13510;Dbxref=GenBank:WP_000571508.1;Name=WP_000571508.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=CCO47_RS13510;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_000571508.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2747731 2748741 . - . ID=gene-CCO47_RS13515;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=CCO47_RS13515;old_locus_tag=CCO47_13515 NZ_CP075113.1 Protein Homology CDS 2747731 2748741 . - 0 ID=cds-WP_000568508.1;Parent=gene-CCO47_RS13515;Dbxref=GenBank:WP_000568508.1;Name=WP_000568508.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460851.1;locus_tag=CCO47_RS13515;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568508.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2748750 2749361 . - . ID=gene-CCO47_RS13520;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=CCO47_RS13520;old_locus_tag=CCO47_13520 NZ_CP075113.1 Protein Homology CDS 2748750 2749361 . - 0 ID=cds-WP_000580335.1;Parent=gene-CCO47_RS13520;Dbxref=GenBank:WP_000580335.1;Name=WP_000580335.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=CCO47_RS13520;product=Holliday junction branch migration protein RuvA;protein_id=WP_000580335.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2749721 2750413 . - . ID=gene-CCO47_RS13525;Name=CCO47_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13525;old_locus_tag=CCO47_13525 NZ_CP075113.1 Protein Homology CDS 2749721 2750413 . - 0 ID=cds-WP_001675835.1;Parent=gene-CCO47_RS13525;Dbxref=GenBank:WP_001675835.1;Name=WP_001675835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227317.1;locus_tag=CCO47_RS13525;product=hypothetical protein;protein_id=WP_001675835.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2750622 2751218 . + . ID=gene-CCO47_RS13530;Name=CCO47_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13530;old_locus_tag=CCO47_13530 NZ_CP075113.1 Protein Homology CDS 2750622 2751218 . + 0 ID=cds-WP_000716751.1;Parent=gene-CCO47_RS13530;Dbxref=GenBank:WP_000716751.1;Name=WP_000716751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716751.1;locus_tag=CCO47_RS13530;product=YebB family permuted papain-like enzyme;protein_id=WP_000716751.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2751318 2752814 . - . ID=gene-CCO47_RS13535;Name=CCO47_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13535;old_locus_tag=CCO47_13535 NZ_CP075113.1 Protein Homology CDS 2751318 2752814 . - 0 ID=cds-WP_000974702.1;Parent=gene-CCO47_RS13535;Dbxref=GenBank:WP_000974702.1;Name=WP_000974702.1;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000974705.1;locus_tag=CCO47_RS13535;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_000974702.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2752845 2753366 . - . ID=gene-CCO47_RS13540;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=CCO47_RS13540;old_locus_tag=CCO47_13540 NZ_CP075113.1 Protein Homology CDS 2752845 2753366 . - 0 ID=cds-WP_000022510.1;Parent=gene-CCO47_RS13540;Dbxref=GenBank:WP_000022510.1;Name=WP_000022510.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=CCO47_RS13540;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_000022510.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2753403 2754143 . - . ID=gene-CCO47_RS13545;Name=CCO47_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13545;old_locus_tag=CCO47_13545 NZ_CP075113.1 Protein Homology CDS 2753403 2754143 . - 0 ID=cds-WP_000907242.1;Parent=gene-CCO47_RS13545;Dbxref=GenBank:WP_000907242.1;Name=WP_000907242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=CCO47_RS13545;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000907242.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2754173 2754625 . - . ID=gene-CCO47_RS13550;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=CCO47_RS13550;old_locus_tag=CCO47_13550 NZ_CP075113.1 Protein Homology CDS 2754173 2754625 . - 0 ID=cds-WP_000653695.1;Parent=gene-CCO47_RS13550;Dbxref=GenBank:WP_000653695.1;Name=WP_000653695.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460857.1;locus_tag=CCO47_RS13550;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_000653695.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2754728 2756500 . - . ID=gene-CCO47_RS13555;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=CCO47_RS13555;old_locus_tag=CCO47_13555 NZ_CP075113.1 Protein Homology CDS 2754728 2756500 . - 0 ID=cds-WP_001258629.1;Parent=gene-CCO47_RS13555;Dbxref=GenBank:WP_001258629.1;Name=WP_001258629.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460858.1;locus_tag=CCO47_RS13555;product=aspartate--tRNA ligase;protein_id=WP_001258629.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2756825 2757391 . + . ID=gene-CCO47_RS13560;Name=CCO47_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13560;old_locus_tag=CCO47_13560 NZ_CP075113.1 Protein Homology CDS 2756825 2757391 . + 0 ID=cds-WP_000916144.1;Parent=gene-CCO47_RS13560;Dbxref=GenBank:WP_000916144.1;Name=WP_000916144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460859.1;locus_tag=CCO47_RS13560;product=hydrolase;protein_id=WP_000916144.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2757388 2758206 . + . ID=gene-CCO47_RS13565;Name=CCO47_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13565;old_locus_tag=CCO47_13565 NZ_CP075113.1 Protein Homology CDS 2757388 2758206 . + 0 ID=cds-WP_000639226.1;Parent=gene-CCO47_RS13565;Dbxref=GenBank:WP_000639226.1;Name=WP_000639226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=CCO47_RS13565;product=DUF72 domain-containing protein;protein_id=WP_000639226.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2758259 2758654 . + . ID=gene-CCO47_RS13570;Name=CCO47_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13570;old_locus_tag=CCO47_13570 NZ_CP075113.1 Protein Homology CDS 2758259 2758654 . + 0 ID=cds-WP_000252975.1;Parent=gene-CCO47_RS13570;Dbxref=GenBank:WP_000252975.1;Name=WP_000252975.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460861.1;locus_tag=CCO47_RS13570;product=MAPEG family protein;protein_id=WP_000252975.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2758695 2759438 . + . ID=gene-CCO47_RS13575;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=CCO47_RS13575;old_locus_tag=CCO47_13575 NZ_CP075113.1 Protein Homology CDS 2758695 2759438 . + 0 ID=cds-WP_000019609.1;Parent=gene-CCO47_RS13575;Dbxref=GenBank:WP_000019609.1;Name=WP_000019609.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460862.1;locus_tag=CCO47_RS13575;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_000019609.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2759435 2760406 . + . ID=gene-CCO47_RS13580;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=CCO47_RS13580;old_locus_tag=CCO47_13580 NZ_CP075113.1 Protein Homology CDS 2759435 2760406 . + 0 ID=cds-WP_000569026.1;Parent=gene-CCO47_RS13580;Dbxref=GenBank:WP_000569026.1;Name=WP_000569026.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460863.1;locus_tag=CCO47_RS13580;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_000569026.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2760642 2761388 . - . ID=gene-CCO47_RS13585;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=CCO47_RS13585;old_locus_tag=CCO47_13585 NZ_CP075113.1 Protein Homology CDS 2760642 2761388 . - 0 ID=cds-WP_001185770.1;Parent=gene-CCO47_RS13585;Dbxref=GenBank:WP_001185770.1;Name=WP_001185770.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460864.1;locus_tag=CCO47_RS13585;product=copper homeostasis protein CutC;protein_id=WP_001185770.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2761408 2761977 . - . ID=gene-CCO47_RS13590;Name=CCO47_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13590;old_locus_tag=CCO47_13590 NZ_CP075113.1 Protein Homology CDS 2761408 2761977 . - 0 ID=cds-WP_000024799.1;Parent=gene-CCO47_RS13590;Dbxref=GenBank:WP_000024799.1;Name=WP_000024799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460865.1;locus_tag=CCO47_RS13590;product=VOC family protein;protein_id=WP_000024799.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2762214 2763947 . + . ID=gene-CCO47_RS13595;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=CCO47_RS13595;old_locus_tag=CCO47_13595 NZ_CP075113.1 Protein Homology CDS 2762214 2763947 . + 0 ID=cds-WP_001025366.1;Parent=gene-CCO47_RS13595;Dbxref=GenBank:WP_001025366.1;Name=WP_001025366.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=CCO47_RS13595;product=arginine--tRNA ligase;protein_id=WP_001025366.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2764136 2766007 . + . ID=gene-CCO47_RS13600;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=CCO47_RS13600;old_locus_tag=CCO47_13600 NZ_CP075113.1 Protein Homology CDS 2764136 2766007 . + 0 ID=cds-WP_000142879.1;Parent=gene-CCO47_RS13600;Dbxref=GenBank:WP_000142879.1;Name=WP_000142879.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=CCO47_RS13600;product=penicillin-binding protein 2;protein_id=WP_000142879.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2766061 2767200 . - . ID=gene-CCO47_RS13605;Name=bglB;gbkey=Gene;gene=bglB;gene_biotype=protein_coding;locus_tag=CCO47_RS13605;old_locus_tag=CCO47_13605 NZ_CP075113.1 Protein Homology CDS 2766061 2767200 . - 0 ID=cds-WP_000989899.1;Parent=gene-CCO47_RS13605;Dbxref=GenBank:WP_000989899.1;Name=WP_000989899.1;Ontology_term=GO:0009313,GO:0004556;gbkey=CDS;gene=bglB;go_function=alpha-amylase activity|0004556||IEA;go_process=oligosaccharide catabolic process|0009313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=CCO47_RS13605;product=beta-galactosidase BglB;protein_id=WP_000989899.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2767436 2767828 . - . ID=gene-CCO47_RS13610;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=CCO47_RS13610;old_locus_tag=CCO47_13610 NZ_CP075113.1 Protein Homology CDS 2767436 2767828 . - 0 ID=cds-WP_001233619.1;Parent=gene-CCO47_RS13610;Dbxref=GenBank:WP_001233619.1;Name=WP_001233619.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460869.1;locus_tag=CCO47_RS13610;product=flagellar protein FlhE;protein_id=WP_001233619.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2767828 2769906 . - . ID=gene-CCO47_RS13615;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=CCO47_RS13615;old_locus_tag=CCO47_13615 NZ_CP075113.1 Protein Homology CDS 2767828 2769906 . - 0 ID=cds-WP_000002392.1;Parent=gene-CCO47_RS13615;Dbxref=GenBank:WP_000002392.1;Name=WP_000002392.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460870.1;locus_tag=CCO47_RS13615;product=flagellar biosynthesis protein FlhA;protein_id=WP_000002392.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2769899 2771050 . - . ID=gene-CCO47_RS13620;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=CCO47_RS13620;old_locus_tag=CCO47_13620 NZ_CP075113.1 Protein Homology CDS 2769899 2771050 . - 0 ID=cds-WP_000797090.1;Parent=gene-CCO47_RS13620;Dbxref=GenBank:WP_000797090.1;Name=WP_000797090.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=CCO47_RS13620;product=flagellar biosynthesis protein FlhB;protein_id=WP_000797090.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2771244 2771888 . - . ID=gene-CCO47_RS13625;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=CCO47_RS13625;old_locus_tag=CCO47_13625 NZ_CP075113.1 Protein Homology CDS 2771244 2771888 . - 0 ID=cds-WP_000983585.1;Parent=gene-CCO47_RS13625;Dbxref=GenBank:WP_000983585.1;Name=WP_000983585.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=CCO47_RS13625;product=protein phosphatase CheZ;protein_id=WP_000983585.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2771899 2772288 . - . ID=gene-CCO47_RS13630;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=CCO47_RS13630;old_locus_tag=CCO47_13630 NZ_CP075113.1 Protein Homology CDS 2771899 2772288 . - 0 ID=cds-WP_000763861.1;Parent=gene-CCO47_RS13630;Dbxref=GenBank:WP_000763861.1;Name=WP_000763861.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=CCO47_RS13630;product=chemotaxis response regulator CheY;protein_id=WP_000763861.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2772306 2773355 . - . ID=gene-CCO47_RS13635;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=CCO47_RS13635;old_locus_tag=CCO47_13635 NZ_CP075113.1 Protein Homology CDS 2772306 2773355 . - 0 ID=cds-WP_000036393.1;Parent=gene-CCO47_RS13635;Dbxref=GenBank:WP_000036393.1;Name=WP_000036393.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=CCO47_RS13635;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_000036393.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2773352 2774218 . - . ID=gene-CCO47_RS13640;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=CCO47_RS13640;old_locus_tag=CCO47_13640 NZ_CP075113.1 Protein Homology CDS 2773352 2774218 . - 0 ID=cds-WP_000204370.1;Parent=gene-CCO47_RS13640;Dbxref=GenBank:WP_000204370.1;Name=WP_000204370.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460875.1;locus_tag=CCO47_RS13640;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_000204370.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2774379 2776040 . - . ID=gene-CCO47_RS13645;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=CCO47_RS13645;old_locus_tag=CCO47_13645 NZ_CP075113.1 Protein Homology CDS 2774379 2776040 . - 0 ID=cds-WP_000483265.1;Parent=gene-CCO47_RS13645;Dbxref=GenBank:WP_000483265.1;Name=WP_000483265.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460876.1;locus_tag=CCO47_RS13645;product=methyl-accepting chemotaxis protein II;protein_id=WP_000483265.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2776277 2776780 . - . ID=gene-CCO47_RS13650;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=CCO47_RS13650;old_locus_tag=CCO47_13650 NZ_CP075113.1 Protein Homology CDS 2776277 2776780 . - 0 ID=cds-WP_000147295.1;Parent=gene-CCO47_RS13650;Dbxref=GenBank:WP_000147295.1;Name=WP_000147295.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=CCO47_RS13650;product=chemotaxis protein CheW;protein_id=WP_000147295.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2776801 2778816 . - . ID=gene-CCO47_RS13655;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=CCO47_RS13655;old_locus_tag=CCO47_13655 NZ_CP075113.1 Protein Homology CDS 2776801 2778816 . - 0 ID=cds-WP_000061316.1;Parent=gene-CCO47_RS13655;Dbxref=GenBank:WP_000061316.1;Name=WP_000061316.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=CCO47_RS13655;product=chemotaxis protein CheA;protein_id=WP_000061316.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2778821 2779750 . - . ID=gene-CCO47_RS13660;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=CCO47_RS13660;old_locus_tag=CCO47_13660 NZ_CP075113.1 Protein Homology CDS 2778821 2779750 . - 0 ID=cds-WP_000795653.1;Parent=gene-CCO47_RS13660;Dbxref=GenBank:WP_000795653.1;Name=WP_000795653.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=CCO47_RS13660;product=flagellar motor protein MotB;protein_id=WP_000795653.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2779747 2780634 . - . ID=gene-CCO47_RS13665;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=CCO47_RS13665;old_locus_tag=CCO47_13665 NZ_CP075113.1 Protein Homology CDS 2779747 2780634 . - 0 ID=cds-WP_000906312.1;Parent=gene-CCO47_RS13665;Dbxref=GenBank:WP_000906312.1;Name=WP_000906312.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=CCO47_RS13665;product=flagellar motor stator protein MotA;protein_id=WP_000906312.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2780759 2781343 . - . ID=gene-CCO47_RS13670;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=CCO47_RS13670;old_locus_tag=CCO47_13670 NZ_CP075113.1 Protein Homology CDS 2780759 2781343 . - 0 ID=cds-WP_000605987.1;Parent=gene-CCO47_RS13670;Dbxref=GenBank:WP_000605987.1;Name=WP_000605987.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460881.3;locus_tag=CCO47_RS13670;product=flagellar transcriptional regulator FlhC;protein_id=WP_000605987.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2781340 2781681 . - . ID=gene-CCO47_RS13675;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=CCO47_RS13675;old_locus_tag=CCO47_13675 NZ_CP075113.1 Protein Homology CDS 2781340 2781681 . - 0 ID=cds-WP_001518146.1;Parent=gene-CCO47_RS13675;Dbxref=GenBank:WP_001518146.1;Name=WP_001518146.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310629.2;locus_tag=CCO47_RS13675;product=flagellar transcriptional regulator FlhD;protein_id=WP_001518146.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2782364 2782480 . + . ID=gene-CCO47_RS13680;Name=CCO47_RS13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13680;old_locus_tag=CCO47_13680 NZ_CP075113.1 Protein Homology CDS 2782364 2782480 . + 0 ID=cds-WP_031617291.1;Parent=gene-CCO47_RS13680;Dbxref=GenBank:WP_031617291.1;Name=WP_031617291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=CCO47_RS13680;product=hypothetical protein;protein_id=WP_031617291.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2782477 2782905 . + . ID=gene-CCO47_RS13685;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=CCO47_RS13685;old_locus_tag=CCO47_13685 NZ_CP075113.1 Protein Homology CDS 2782477 2782905 . + 0 ID=cds-WP_000122606.1;Parent=gene-CCO47_RS13685;Dbxref=GenBank:WP_000122606.1;Name=WP_000122606.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=CCO47_RS13685;product=universal stress protein UspC;protein_id=WP_000122606.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2782923 2784344 . - . ID=gene-CCO47_RS13690;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=CCO47_RS13690;old_locus_tag=CCO47_13690 NZ_CP075113.1 Protein Homology CDS 2782923 2784344 . - 0 ID=cds-WP_000089042.1;Parent=gene-CCO47_RS13690;Dbxref=GenBank:WP_000089042.1;Name=WP_000089042.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460885.1;locus_tag=CCO47_RS13690;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_000089042.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2784319 2785122 . - . ID=gene-CCO47_RS13695;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=CCO47_RS13695;old_locus_tag=CCO47_13695 NZ_CP075113.1 Protein Homology CDS 2784319 2785122 . - 0 ID=cds-WP_000840114.1;Parent=gene-CCO47_RS13695;Dbxref=GenBank:WP_000840114.1;Name=WP_000840114.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460886.1;locus_tag=CCO47_RS13695;product=trehalose-phosphatase;protein_id=WP_000840114.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2785345 2785526 . - . ID=gene-CCO47_RS13700;Name=araH;end_range=2785526,.;gbkey=Gene;gene=araH;gene_biotype=pseudogene;locus_tag=CCO47_RS13700;old_locus_tag=CCO47_13700;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 2785345 2785526 . - 0 ID=cds-CCO47_RS13700;Parent=gene-CCO47_RS13700;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2785526,.;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026162.2;locus_tag=CCO47_RS13700;partial=true;product=L-arabinose ABC transporter permease AraH;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2785755 2786312 . - . ID=gene-CCO47_RS13705;Name=CCO47_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13705;old_locus_tag=CCO47_13705 NZ_CP075113.1 Protein Homology CDS 2785755 2786312 . - 0 ID=cds-WP_000754800.1;Parent=gene-CCO47_RS13705;Dbxref=GenBank:WP_000754800.1;Name=WP_000754800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=CCO47_RS13705;product=DJ-1/PfpI family protein;protein_id=WP_000754800.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2786863 2787366 . + . ID=gene-CCO47_RS13710;Name=CCO47_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13710;old_locus_tag=CCO47_13710 NZ_CP075113.1 Protein Homology CDS 2786863 2787366 . + 0 ID=cds-WP_000741707.1;Parent=gene-CCO47_RS13710;Dbxref=GenBank:WP_000741707.1;Name=WP_000741707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460888.1;locus_tag=CCO47_RS13710;product=non-heme ferritin-like protein;protein_id=WP_000741707.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2787545 2788183 . - . ID=gene-CCO47_RS13715;Name=CCO47_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13715;old_locus_tag=CCO47_13715 NZ_CP075113.1 Protein Homology CDS 2787545 2788183 . - 0 ID=cds-WP_000684804.1;Parent=gene-CCO47_RS13715;Dbxref=GenBank:WP_000684804.1;Name=WP_000684804.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460889.1;locus_tag=CCO47_RS13715;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_000684804.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2788439 2788774 . + . ID=gene-CCO47_RS13720;Name=CCO47_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13720;old_locus_tag=CCO47_13720 NZ_CP075113.1 Protein Homology CDS 2788439 2788774 . + 0 ID=cds-WP_000803234.1;Parent=gene-CCO47_RS13720;Dbxref=GenBank:WP_000803234.1;Name=WP_000803234.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460890.1;locus_tag=CCO47_RS13720;product=YecR-like family lipoprotein;protein_id=WP_000803234.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2789014 2789511 . + . ID=gene-CCO47_RS13725;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=CCO47_RS13725;old_locus_tag=CCO47_13725 NZ_CP075113.1 Protein Homology CDS 2789014 2789511 . + 0 ID=cds-WP_000920611.1;Parent=gene-CCO47_RS13725;Dbxref=GenBank:WP_000920611.1;Name=WP_000920611.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=CCO47_RS13725;product=non-heme ferritin;protein_id=WP_000920611.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2789557 2789796 . - . ID=gene-CCO47_RS13730;Name=CCO47_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13730;old_locus_tag=CCO47_13730 NZ_CP075113.1 Protein Homology CDS 2789557 2789796 . - 0 ID=cds-WP_000377238.1;Parent=gene-CCO47_RS13730;Dbxref=GenBank:WP_000377238.1;Name=WP_000377238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460892.1;locus_tag=CCO47_RS13730;product=YecH family metal-binding protein;protein_id=WP_000377238.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2790023 2791234 . + . ID=gene-CCO47_RS13735;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=CCO47_RS13735;old_locus_tag=CCO47_13735 NZ_CP075113.1 Protein Homology CDS 2790023 2791234 . + 0 ID=cds-WP_001562965.1;Parent=gene-CCO47_RS13735;Dbxref=GenBank:WP_001562965.1;Name=WP_001562965.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460893.1;locus_tag=CCO47_RS13735;product=tyrosine transporter TyrP;protein_id=WP_001562965.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2791309 2791974 . - . ID=gene-CCO47_RS13740;Name=CCO47_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13740;old_locus_tag=CCO47_13740 NZ_CP075113.1 Protein Homology CDS 2791309 2791974 . - 0 ID=cds-WP_000781526.1;Parent=gene-CCO47_RS13740;Dbxref=GenBank:WP_000781526.1;Name=WP_000781526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460894.1;locus_tag=CCO47_RS13740;product=YecA/YgfB family protein;protein_id=WP_000781526.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2792213 2792539 . - . ID=gene-CCO47_RS13745;Name=CCO47_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13745;old_locus_tag=CCO47_13745 NZ_CP075113.1 Protein Homology CDS 2792213 2792539 . - 0 ID=cds-WP_000240832.1;Parent=gene-CCO47_RS13745;Dbxref=GenBank:WP_000240832.1;Name=WP_000240832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=CCO47_RS13745;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000240832.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2792752 2794191 . - . ID=gene-CCO47_RS13750;Name=CCO47_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13750;old_locus_tag=CCO47_13750 NZ_CP075113.1 Protein Homology CDS 2792752 2794191 . - 0 ID=cds-WP_001574190.1;Parent=gene-CCO47_RS13750;Dbxref=GenBank:WP_001574190.1;Name=WP_001574190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=CCO47_RS13750;product=SH3 domain-containing C40 family peptidase;protein_id=WP_001574190.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2794405 2794736 . - . ID=gene-CCO47_RS13755;Name=CCO47_RS13755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS13755;old_locus_tag=CCO47_13755;pseudo=true NZ_CP075113.1 Protein Homology CDS 2794405 2794736 . - 0 ID=cds-CCO47_RS13755;Parent=gene-CCO47_RS13755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460897.1;locus_tag=CCO47_RS13755;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2794986 2795072 . - . ID=gene-CCO47_RS13760;Name=CCO47_RS13760;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS13760;old_locus_tag=CCO47_13760 NZ_CP075113.1 tRNAscan-SE tRNA 2794986 2795072 . - . ID=rna-CCO47_RS13760;Parent=gene-CCO47_RS13760;anticodon=(pos:complement(2795036..2795038));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS13760;product=tRNA-Leu NZ_CP075113.1 tRNAscan-SE exon 2794986 2795072 . - . ID=exon-CCO47_RS13760-1;Parent=rna-CCO47_RS13760;anticodon=(pos:complement(2795036..2795038));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS13760;product=tRNA-Leu NZ_CP075113.1 RefSeq gene 2795084 2795157 . - . ID=gene-CCO47_RS13765;Name=CCO47_RS13765;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS13765;old_locus_tag=CCO47_13765 NZ_CP075113.1 tRNAscan-SE tRNA 2795084 2795157 . - . ID=rna-CCO47_RS13765;Parent=gene-CCO47_RS13765;anticodon=(pos:complement(2795123..2795125));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS13765;product=tRNA-Cys NZ_CP075113.1 tRNAscan-SE exon 2795084 2795157 . - . ID=exon-CCO47_RS13765-1;Parent=rna-CCO47_RS13765;anticodon=(pos:complement(2795123..2795125));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS13765;product=tRNA-Cys NZ_CP075113.1 RefSeq gene 2795210 2795285 . - . ID=gene-CCO47_RS13770;Name=CCO47_RS13770;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS13770;old_locus_tag=CCO47_13770 NZ_CP075113.1 tRNAscan-SE tRNA 2795210 2795285 . - . ID=rna-CCO47_RS13770;Parent=gene-CCO47_RS13770;anticodon=(pos:complement(2795250..2795252));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS13770;product=tRNA-Gly NZ_CP075113.1 tRNAscan-SE exon 2795210 2795285 . - . ID=exon-CCO47_RS13770-1;Parent=rna-CCO47_RS13770;anticodon=(pos:complement(2795250..2795252));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS13770;product=tRNA-Gly NZ_CP075113.1 RefSeq gene 2795437 2795985 . - . ID=gene-CCO47_RS13775;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=CCO47_RS13775;old_locus_tag=CCO47_13775 NZ_CP075113.1 Protein Homology CDS 2795437 2795985 . - 0 ID=cds-WP_001160192.1;Parent=gene-CCO47_RS13775;Dbxref=GenBank:WP_001160192.1;Name=WP_001160192.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460898.1;locus_tag=CCO47_RS13775;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001160192.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2796042 2797874 . - . ID=gene-CCO47_RS13780;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=CCO47_RS13780;old_locus_tag=CCO47_13780 NZ_CP075113.1 Protein Homology CDS 2796042 2797874 . - 0 ID=cds-WP_094912441.1;Parent=gene-CCO47_RS13780;Dbxref=GenBank:WP_094912441.1;Name=WP_094912441.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460899.1;locus_tag=CCO47_RS13780;product=excinuclease ABC subunit UvrC;protein_id=WP_094912441.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2797871 2798527 . - . ID=gene-CCO47_RS13785;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=CCO47_RS13785;old_locus_tag=CCO47_13785 NZ_CP075113.1 Protein Homology CDS 2797871 2798527 . - 0 ID=cds-WP_000611323.1;Parent=gene-CCO47_RS13785;Dbxref=GenBank:WP_000611323.1;Name=WP_000611323.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460900.1;locus_tag=CCO47_RS13785;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_000611323.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2798839 2798994 . + . ID=gene-CCO47_RS13790;Name=CCO47_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13790;old_locus_tag=CCO47_13790 NZ_CP075113.1 Protein Homology CDS 2798839 2798994 . + 0 ID=cds-WP_000546188.1;Parent=gene-CCO47_RS13790;Dbxref=GenBank:WP_000546188.1;Name=WP_000546188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=CCO47_RS13790;product=hypothetical protein;protein_id=WP_000546188.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2798991 2799215 . + . ID=gene-CCO47_RS13795;Name=CCO47_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13795;old_locus_tag=CCO47_13795 NZ_CP075113.1 Protein Homology CDS 2798991 2799215 . + 0 ID=cds-WP_000106483.1;Parent=gene-CCO47_RS13795;Dbxref=GenBank:WP_000106483.1;Name=WP_000106483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460902.1;locus_tag=CCO47_RS13795;product=DUF2594 family protein;protein_id=WP_000106483.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2799282 2800004 . - . ID=gene-CCO47_RS13800;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=CCO47_RS13800;old_locus_tag=CCO47_13800 NZ_CP075113.1 Protein Homology CDS 2799282 2800004 . - 0 ID=cds-WP_001157165.1;Parent=gene-CCO47_RS13800;Dbxref=GenBank:WP_001157165.1;Name=WP_001157165.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460903.1;locus_tag=CCO47_RS13800;product=quorum-sensing transcriptional regulator SdiA;protein_id=WP_001157165.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2800237 2800989 . - . ID=gene-CCO47_RS13805;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=CCO47_RS13805;old_locus_tag=CCO47_13805 NZ_CP075113.1 Protein Homology CDS 2800237 2800989 . - 0 ID=cds-WP_001273044.1;Parent=gene-CCO47_RS13805;Dbxref=GenBank:WP_001273044.1;Name=WP_001273044.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460904.1;locus_tag=CCO47_RS13805;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_001273044.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2800986 2801654 . - . ID=gene-CCO47_RS13810;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=CCO47_RS13810;old_locus_tag=CCO47_13810 NZ_CP075113.1 Protein Homology CDS 2800986 2801654 . - 0 ID=cds-WP_001158237.1;Parent=gene-CCO47_RS13810;Dbxref=GenBank:WP_001158237.1;Name=WP_001158237.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460905.1;locus_tag=CCO47_RS13810;product=cystine ABC transporter permease;protein_id=WP_001158237.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2801675 2802661 . - . ID=gene-CCO47_RS13815;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=CCO47_RS13815;old_locus_tag=CCO47_13815 NZ_CP075113.1 Protein Homology CDS 2801675 2802661 . - 0 ID=cds-WP_001128188.1;Parent=gene-CCO47_RS13815;Dbxref=GenBank:WP_001128188.1;Name=WP_001128188.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=CCO47_RS13815;product=D-cysteine desulfhydrase;protein_id=WP_001128188.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2802815 2803615 . - . ID=gene-CCO47_RS13820;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=CCO47_RS13820;old_locus_tag=CCO47_13820 NZ_CP075113.1 Protein Homology CDS 2802815 2803615 . - 0 ID=cds-WP_000761628.1;Parent=gene-CCO47_RS13820;Dbxref=GenBank:WP_000761628.1;Name=WP_000761628.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460907.1;locus_tag=CCO47_RS13820;product=cystine ABC transporter substrate-binding protein;protein_id=WP_000761628.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2803762 2804313 . - . ID=gene-CCO47_RS13825;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=CCO47_RS13825;old_locus_tag=CCO47_13825 NZ_CP075113.1 Protein Homology CDS 2803762 2804313 . - 0 ID=cds-WP_000218080.1;Parent=gene-CCO47_RS13825;Dbxref=GenBank:WP_000218080.1;Name=WP_000218080.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460908.1;locus_tag=CCO47_RS13825;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_000218080.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2804372 2805091 . - . ID=gene-CCO47_RS13830;Name=CCO47_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13830;old_locus_tag=CCO47_13830 NZ_CP075113.1 Protein Homology CDS 2804372 2805091 . - 0 ID=cds-WP_001087453.1;Parent=gene-CCO47_RS13830;Dbxref=GenBank:WP_001087453.1;Name=WP_001087453.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460909.1;locus_tag=CCO47_RS13830;product=RNA polymerase sigma factor FliA;protein_id=WP_001087453.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2805288 2806493 . - . ID=gene-CCO47_RS13835;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=protein_coding;locus_tag=CCO47_RS13835;old_locus_tag=CCO47_13835 NZ_CP075113.1 Protein Homology CDS 2805288 2806493 . - 0 ID=cds-WP_000659245.1;Parent=gene-CCO47_RS13835;Dbxref=GenBank:WP_000659245.1;Name=WP_000659245.1;gbkey=CDS;gene=fliB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=CCO47_RS13835;product=flagellin lysine-N-methylase;protein_id=WP_000659245.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2806572 2808089 . - . ID=gene-CCO47_RS13840;Name=CCO47_RS13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13840;old_locus_tag=CCO47_13840 NZ_CP075113.1 Protein Homology CDS 2806572 2808089 . - 0 ID=cds-WP_000079834.1;Parent=gene-CCO47_RS13840;Dbxref=GenBank:WP_000079834.1;Name=WP_000079834.1;Ontology_term=GO:0071973,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079837.1;locus_tag=CCO47_RS13840;product=flagellin N-terminal helical domain-containing protein;protein_id=WP_000079834.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2808107 2808346 . - . ID=gene-CCO47_RS13845;Name=CCO47_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13845;old_locus_tag=CCO47_13845 NZ_CP075113.1 GeneMarkS-2+ CDS 2808107 2808346 . - 0 ID=cds-WP_001141165.1;Parent=gene-CCO47_RS13845;Dbxref=GenBank:WP_001141165.1;Name=WP_001141165.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO47_RS13845;product=hypothetical protein;protein_id=WP_001141165.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2808345 2809751 . + . ID=gene-CCO47_RS13850;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=CCO47_RS13850;old_locus_tag=CCO47_13850 NZ_CP075113.1 Protein Homology CDS 2808345 2809751 . + 0 ID=cds-WP_000146816.1;Parent=gene-CCO47_RS13850;Dbxref=GenBank:WP_000146816.1;Name=WP_000146816.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460913.1;locus_tag=CCO47_RS13850;product=flagellar filament capping protein FliD;protein_id=WP_000146816.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2809766 2810173 . + . ID=gene-CCO47_RS13855;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=CCO47_RS13855;old_locus_tag=CCO47_13855 NZ_CP075113.1 Protein Homology CDS 2809766 2810173 . + 0 ID=cds-WP_000287764.1;Parent=gene-CCO47_RS13855;Dbxref=GenBank:WP_000287764.1;Name=WP_000287764.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460914.1;locus_tag=CCO47_RS13855;product=flagellar export chaperone FliS;protein_id=WP_000287764.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2810173 2810541 . + . ID=gene-CCO47_RS13860;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=CCO47_RS13860;old_locus_tag=CCO47_13860 NZ_CP075113.1 Protein Homology CDS 2810173 2810541 . + 0 ID=cds-WP_000204899.1;Parent=gene-CCO47_RS13860;Dbxref=GenBank:WP_000204899.1;Name=WP_000204899.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460915.1;locus_tag=CCO47_RS13860;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_000204899.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2810613 2812097 . + . ID=gene-CCO47_RS13865;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=CCO47_RS13865;old_locus_tag=CCO47_13865 NZ_CP075113.1 Protein Homology CDS 2810613 2812097 . + 0 ID=cds-WP_000795480.1;Parent=gene-CCO47_RS13865;Dbxref=GenBank:WP_000795480.1;Name=WP_000795480.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=CCO47_RS13865;product=alpha-amylase;protein_id=WP_000795480.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2812137 2812550 . - . ID=gene-CCO47_RS13870;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=CCO47_RS13870;old_locus_tag=CCO47_13870 NZ_CP075113.1 Protein Homology CDS 2812137 2812550 . - 0 ID=cds-WP_000754699.1;Parent=gene-CCO47_RS13870;Dbxref=GenBank:WP_000754699.1;Name=WP_000754699.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754699.1;locus_tag=CCO47_RS13870;product=lipoprotein YedD;protein_id=WP_000754699.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2812736 2813941 . + . ID=gene-CCO47_RS13875;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=CCO47_RS13875;old_locus_tag=CCO47_13875 NZ_CP075113.1 Protein Homology CDS 2812736 2813941 . + 0 ID=cds-WP_001531105.1;Parent=gene-CCO47_RS13875;Dbxref=GenBank:WP_001531105.1;Name=WP_001531105.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156840.1;locus_tag=CCO47_RS13875;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_001531105.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2813938 2814171 . + . ID=gene-CCO47_RS13880;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=CCO47_RS13880;old_locus_tag=CCO47_13880 NZ_CP075113.1 Protein Homology CDS 2813938 2814171 . + 0 ID=cds-WP_000790504.1;Parent=gene-CCO47_RS13880;Dbxref=GenBank:WP_000790504.1;Name=WP_000790504.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=CCO47_RS13880;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000790504.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2814436 2814822 . + . ID=gene-CCO47_RS13885;Name=CCO47_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13885;old_locus_tag=CCO47_13885 NZ_CP075113.1 Protein Homology CDS 2814436 2814822 . + 0 ID=cds-WP_000639596.1;Parent=gene-CCO47_RS13885;Dbxref=GenBank:WP_000639596.1;Name=WP_000639596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=CCO47_RS13885;product=hypothetical protein;protein_id=WP_000639596.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2814942 2815256 . - . ID=gene-CCO47_RS13890;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=CCO47_RS13890;old_locus_tag=CCO47_13890 NZ_CP075113.1 Protein Homology CDS 2814942 2815256 . - 0 ID=cds-WP_000719037.1;Parent=gene-CCO47_RS13890;Dbxref=GenBank:WP_000719037.1;Name=WP_000719037.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460921.1;locus_tag=CCO47_RS13890;product=flagellar hook-basal body complex protein FliE;protein_id=WP_000719037.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2815473 2817146 . + . ID=gene-CCO47_RS13895;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=CCO47_RS13895;old_locus_tag=CCO47_13895 NZ_CP075113.1 Protein Homology CDS 2815473 2817146 . + 0 ID=cds-WP_001276844.1;Parent=gene-CCO47_RS13895;Dbxref=GenBank:WP_001276844.1;Name=WP_001276844.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001276844.1;locus_tag=CCO47_RS13895;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_001276844.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2817139 2818134 . + . ID=gene-CCO47_RS13900;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=CCO47_RS13900;old_locus_tag=CCO47_13900 NZ_CP075113.1 Protein Homology CDS 2817139 2818134 . + 0 ID=cds-WP_000067735.1;Parent=gene-CCO47_RS13900;Dbxref=GenBank:WP_000067735.1;Name=WP_000067735.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460923.1;locus_tag=CCO47_RS13900;product=flagellar motor switch protein FliG;protein_id=WP_000067735.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2818127 2818834 . + . ID=gene-CCO47_RS13905;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=CCO47_RS13905;old_locus_tag=CCO47_13905 NZ_CP075113.1 Protein Homology CDS 2818127 2818834 . + 0 ID=cds-WP_000064158.1;Parent=gene-CCO47_RS13905;Dbxref=GenBank:WP_000064158.1;Name=WP_000064158.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460924.1;locus_tag=CCO47_RS13905;product=flagellar assembly protein FliH;protein_id=WP_000064158.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2818834 2820204 . + . ID=gene-CCO47_RS13910;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=CCO47_RS13910;old_locus_tag=CCO47_13910 NZ_CP075113.1 Protein Homology CDS 2818834 2820204 . + 0 ID=cds-WP_000213257.1;Parent=gene-CCO47_RS13910;Dbxref=GenBank:WP_000213257.1;Name=WP_000213257.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=CCO47_RS13910;product=flagellar protein export ATPase FliI;protein_id=WP_000213257.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2820226 2820669 . + . ID=gene-CCO47_RS13915;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=CCO47_RS13915;old_locus_tag=CCO47_13915 NZ_CP075113.1 Protein Homology CDS 2820226 2820669 . + 0 ID=cds-WP_000046981.1;Parent=gene-CCO47_RS13915;Dbxref=GenBank:WP_000046981.1;Name=WP_000046981.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460926.1;locus_tag=CCO47_RS13915;product=flagellar export protein FliJ;protein_id=WP_000046981.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2820666 2821883 . + . ID=gene-CCO47_RS13920;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=CCO47_RS13920;old_locus_tag=CCO47_13920 NZ_CP075113.1 Protein Homology CDS 2820666 2821883 . + 0 ID=cds-WP_000631684.1;Parent=gene-CCO47_RS13920;Dbxref=GenBank:WP_000631684.1;Name=WP_000631684.1;Ontology_term=GO:0044780,GO:0009424;gbkey=CDS;gene=fliK;go_component=bacterial-type flagellum hook|0009424||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=CCO47_RS13920;product=flagellar hook length control protein FliK;protein_id=WP_000631684.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2821988 2822455 . + . ID=gene-CCO47_RS13925;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=CCO47_RS13925;old_locus_tag=CCO47_13925 NZ_CP075113.1 Protein Homology CDS 2821988 2822455 . + 0 ID=cds-WP_000132169.1;Parent=gene-CCO47_RS13925;Dbxref=GenBank:WP_000132169.1;Name=WP_000132169.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=CCO47_RS13925;product=flagellar basal body-associated protein FliL;protein_id=WP_000132169.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2822460 2823464 . + . ID=gene-CCO47_RS13930;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=CCO47_RS13930;old_locus_tag=CCO47_13930 NZ_CP075113.1 Protein Homology CDS 2822460 2823464 . + 0 ID=cds-WP_000502811.1;Parent=gene-CCO47_RS13930;Dbxref=GenBank:WP_000502811.1;Name=WP_000502811.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=CCO47_RS13930;product=flagellar motor switch protein FliM;protein_id=WP_000502811.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2823461 2823874 . + . ID=gene-CCO47_RS13935;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=CCO47_RS13935;old_locus_tag=CCO47_13935 NZ_CP075113.1 Protein Homology CDS 2823461 2823874 . + 0 ID=cds-WP_001282111.1;Parent=gene-CCO47_RS13935;Dbxref=GenBank:WP_001282111.1;Name=WP_001282111.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460930.1;locus_tag=CCO47_RS13935;product=flagellar motor switch protein FliN;protein_id=WP_001282111.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2823874 2824251 . + . ID=gene-CCO47_RS13940;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=CCO47_RS13940;old_locus_tag=CCO47_13940 NZ_CP075113.1 Protein Homology CDS 2823874 2824251 . + 0 ID=cds-WP_000978276.1;Parent=gene-CCO47_RS13940;Dbxref=GenBank:WP_000978276.1;Name=WP_000978276.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460931.3;locus_tag=CCO47_RS13940;product=flagellar biosynthetic protein FliO;protein_id=WP_000978276.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2824251 2824988 . + . ID=gene-CCO47_RS13945;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=CCO47_RS13945;old_locus_tag=CCO47_13945 NZ_CP075113.1 Protein Homology CDS 2824251 2824988 . + 0 ID=cds-WP_001253411.1;Parent=gene-CCO47_RS13945;Dbxref=GenBank:WP_001253411.1;Name=WP_001253411.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460932.1;locus_tag=CCO47_RS13945;product=flagellar type III secretion system pore protein FliP;protein_id=WP_001253411.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2824998 2825267 . + . ID=gene-CCO47_RS13950;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=CCO47_RS13950;old_locus_tag=CCO47_13950 NZ_CP075113.1 Protein Homology CDS 2824998 2825267 . + 0 ID=cds-WP_000187355.1;Parent=gene-CCO47_RS13950;Dbxref=GenBank:WP_000187355.1;Name=WP_000187355.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=CCO47_RS13950;product=flagellar biosynthesis protein FliQ;protein_id=WP_000187355.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2825276 2826070 . + . ID=gene-CCO47_RS13955;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=CCO47_RS13955;old_locus_tag=CCO47_13955 NZ_CP075113.1 Protein Homology CDS 2825276 2826070 . + 0 ID=cds-WP_000616955.1;Parent=gene-CCO47_RS13955;Dbxref=GenBank:WP_000616955.1;Name=WP_000616955.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=CCO47_RS13955;product=flagellar biosynthetic protein FliR;protein_id=WP_000616955.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2826352 2826975 . + . ID=gene-CCO47_RS13960;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=CCO47_RS13960;old_locus_tag=CCO47_13960 NZ_CP075113.1 Protein Homology CDS 2826352 2826975 . + 0 ID=cds-WP_000103974.1;Parent=gene-CCO47_RS13960;Dbxref=GenBank:WP_000103974.1;Name=WP_000103974.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460935.1;locus_tag=CCO47_RS13960;product=transcriptional regulator RcsA;protein_id=WP_000103974.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2827014 2827208 . - . ID=gene-CCO47_RS13965;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=CCO47_RS13965;old_locus_tag=CCO47_13965 NZ_CP075113.1 Protein Homology CDS 2827014 2827208 . - 0 ID=cds-WP_000867218.1;Parent=gene-CCO47_RS13965;Dbxref=GenBank:WP_000867218.1;Name=WP_000867218.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736680.1;locus_tag=CCO47_RS13965;product=protein DsrB;protein_id=WP_000867218.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2827337 2827564 . + . ID=gene-CCO47_RS13970;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=CCO47_RS13970;old_locus_tag=CCO47_13970 NZ_CP075113.1 Protein Homology CDS 2827337 2827564 . + 0 ID=cds-WP_000844798.1;Parent=gene-CCO47_RS13970;Dbxref=GenBank:WP_000844798.1;Name=WP_000844798.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460936.1;locus_tag=CCO47_RS13970;product=YodD family peroxide/acid resistance protein;protein_id=WP_000844798.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2827874 2828710 . + . ID=gene-CCO47_RS13975;Name=CCO47_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13975;old_locus_tag=CCO47_13975 NZ_CP075113.1 Protein Homology CDS 2827874 2828710 . + 0 ID=cds-WP_000948784.1;Parent=gene-CCO47_RS13975;Dbxref=GenBank:WP_000948784.1;Name=WP_000948784.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460937.1;locus_tag=CCO47_RS13975;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_000948784.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2828689 2830401 . - . ID=gene-CCO47_RS13980;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=CCO47_RS13980;old_locus_tag=CCO47_13980 NZ_CP075113.1 Protein Homology CDS 2828689 2830401 . - 0 ID=cds-WP_001119828.1;Parent=gene-CCO47_RS13980;Dbxref=GenBank:WP_001119828.1;Name=WP_001119828.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460938.1;locus_tag=CCO47_RS13980;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_001119828.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2830566 2830751 . - . ID=gene-CCO47_RS13985;Name=CCO47_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13985;old_locus_tag=CCO47_13985 NZ_CP075113.1 Protein Homology CDS 2830566 2830751 . - 0 ID=cds-WP_001521741.1;Parent=gene-CCO47_RS13985;Dbxref=GenBank:WP_001521741.1;Name=WP_001521741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549490.1;locus_tag=CCO47_RS13985;product=YodC family protein;protein_id=WP_001521741.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2830828 2831745 . - . ID=gene-CCO47_RS13990;Name=CCO47_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS13990;old_locus_tag=CCO47_13990 NZ_CP075113.1 Protein Homology CDS 2830828 2831745 . - 0 ID=cds-WP_085983347.1;Parent=gene-CCO47_RS13990;Dbxref=GenBank:WP_085983347.1;Name=WP_085983347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=CCO47_RS13990;product=DUF808 domain-containing protein;protein_id=WP_085983347.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2831915 2832835 . + . ID=gene-CCO47_RS13995;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=CCO47_RS13995;old_locus_tag=CCO47_13995 NZ_CP075113.1 Protein Homology CDS 2831915 2832835 . + 0 ID=cds-WP_001212267.1;Parent=gene-CCO47_RS13995;Dbxref=GenBank:WP_001212267.1;Name=WP_001212267.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460941.1;locus_tag=CCO47_RS13995;product=drug/metabolite exporter YedA;protein_id=WP_001212267.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2832824 2833294 . - . ID=gene-CCO47_RS14000;Name=CCO47_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14000;old_locus_tag=CCO47_14000 NZ_CP075113.1 Protein Homology CDS 2832824 2833294 . - 0 ID=cds-WP_000785978.1;Parent=gene-CCO47_RS14000;Dbxref=GenBank:WP_000785978.1;Name=WP_000785978.1;Ontology_term=GO:0006298,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460942.1;locus_tag=CCO47_RS14000;product=very short patch repair endonuclease;protein_id=WP_000785978.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2833275 2834705 . - . ID=gene-CCO47_RS14005;Name=CCO47_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14005;old_locus_tag=CCO47_14005 NZ_CP075113.1 Protein Homology CDS 2833275 2834705 . - 0 ID=cds-WP_001157309.1;Parent=gene-CCO47_RS14005;Dbxref=GenBank:WP_001157309.1;Name=WP_001157309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460943.1;locus_tag=CCO47_RS14005;product=DNA cytosine methyltransferase;protein_id=WP_001157309.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2834779 2835474 . - . ID=gene-CCO47_RS14010;Name=CCO47_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14010;old_locus_tag=CCO47_14010 NZ_CP075113.1 Protein Homology CDS 2834779 2835474 . - 0 ID=cds-WP_000377040.1;Parent=gene-CCO47_RS14010;Dbxref=GenBank:WP_000377040.1;Name=WP_000377040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460944.1;locus_tag=CCO47_RS14010;product=phosphohydrolase;protein_id=WP_000377040.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2835554 2835865 . - . ID=gene-CCO47_RS14015;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=CCO47_RS14015;old_locus_tag=CCO47_14015 NZ_CP075113.1 Protein Homology CDS 2835554 2835865 . - 0 ID=cds-WP_000107437.1;Parent=gene-CCO47_RS14015;Dbxref=GenBank:WP_000107437.1;Name=WP_000107437.1;Ontology_term=GO:0051301;gbkey=CDS;gene=drpB;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460945.1;locus_tag=CCO47_RS14015;product=cell division protein DrpB;protein_id=WP_000107437.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2836515 2837726 . + . ID=gene-CCO47_RS14020;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=pseudogene;locus_tag=CCO47_RS14020;old_locus_tag=CCO47_14020;pseudo=true NZ_CP075113.1 Protein Homology CDS 2836515 2837726 . + 0 ID=cds-CCO47_RS14020;Parent=gene-CCO47_RS14020;Note=internal stop;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=CCO47_RS14020;product=porin OmpC;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2837985 2838173 . - . ID=gene-CCO47_RS14025;Name=ymcF;gbkey=Gene;gene=ymcF;gene_biotype=protein_coding;locus_tag=CCO47_RS14025;old_locus_tag=CCO47_14025 NZ_CP075113.1 Protein Homology CDS 2837985 2838173 . - 0 ID=cds-WP_024131163.1;Parent=gene-CCO47_RS14025;Dbxref=GenBank:WP_024131163.1;Name=WP_024131163.1;gbkey=CDS;gene=ymcF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=CCO47_RS14025;product=cold shock small protein YmcF;protein_id=WP_024131163.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2838184 2838396 . - . ID=gene-CCO47_RS14030;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO47_RS14030;old_locus_tag=CCO47_14030 NZ_CP075113.1 Protein Homology CDS 2838184 2838396 . - 0 ID=cds-WP_000208509.1;Parent=gene-CCO47_RS14030;Dbxref=GenBank:WP_000208509.1;Name=WP_000208509.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460947.1;locus_tag=CCO47_RS14030;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000208509.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2838936 2839313 . - . ID=gene-CCO47_RS14035;Name=CCO47_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14035;old_locus_tag=CCO47_14035 NZ_CP075113.1 Protein Homology CDS 2838936 2839313 . - 0 ID=cds-WP_001574179.1;Parent=gene-CCO47_RS14035;Dbxref=GenBank:WP_001574179.1;Name=WP_001574179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574179.1;locus_tag=CCO47_RS14035;product=hypothetical protein;protein_id=WP_001574179.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2839310 2839588 . - . ID=gene-CCO47_RS14040;Name=CCO47_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14040;old_locus_tag=CCO47_14040 NZ_CP075113.1 Protein Homology CDS 2839310 2839588 . - 0 ID=cds-WP_001675348.1;Parent=gene-CCO47_RS14040;Dbxref=GenBank:WP_001675348.1;Name=WP_001675348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675348.1;locus_tag=CCO47_RS14040;product=hypothetical protein;protein_id=WP_001675348.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2839856 2840635 . + . ID=gene-CCO47_RS14045;Name=CCO47_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14045;old_locus_tag=CCO47_14045 NZ_CP075113.1 Protein Homology CDS 2839856 2840635 . + 0 ID=cds-WP_000686692.1;Parent=gene-CCO47_RS14045;Dbxref=GenBank:WP_000686692.1;Name=WP_000686692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000686692.1;locus_tag=CCO47_RS14045;product=lipoprotein YafT;protein_id=WP_000686692.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2840774 2841922 . - . ID=gene-CCO47_RS14050;Name=CCO47_RS14050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS14050;old_locus_tag=CCO47_14050;pseudo=true NZ_CP075113.1 Protein Homology CDS 2840774 2841922 . - 0 ID=cds-CCO47_RS14050;Parent=gene-CCO47_RS14050;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=CCO47_RS14050;product=IS3-like element IS1230B family transposase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2842116 2842565 . - . ID=gene-CCO47_RS14055;Name=CCO47_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14055;old_locus_tag=CCO47_14055 NZ_CP075113.1 Protein Homology CDS 2842116 2842565 . - 0 ID=cds-WP_012543341.1;Parent=gene-CCO47_RS14055;Dbxref=GenBank:WP_012543341.1;Name=WP_012543341.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675827.1;locus_tag=CCO47_RS14055;product=tetratricopeptide repeat protein;protein_id=WP_012543341.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2842628 2843080 . - . ID=gene-CCO47_RS14065;Name=CCO47_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14065;old_locus_tag=CCO47_14065 NZ_CP075113.1 Protein Homology CDS 2842628 2843080 . - 0 ID=cds-WP_001675351.1;Parent=gene-CCO47_RS14065;Dbxref=GenBank:WP_001675351.1;Name=WP_001675351.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675351.1;locus_tag=CCO47_RS14065;product=tetratricopeptide repeat protein;protein_id=WP_001675351.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2843148 2843660 . - . ID=gene-CCO47_RS14070;Name=CCO47_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14070;old_locus_tag=CCO47_14070 NZ_CP075113.1 Protein Homology CDS 2843148 2843660 . - 0 ID=cds-WP_001574177.1;Parent=gene-CCO47_RS14070;Dbxref=GenBank:WP_001574177.1;Name=WP_001574177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662368.1;locus_tag=CCO47_RS14070;product=hypothetical protein;protein_id=WP_001574177.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2843906 2844238 . - . ID=gene-CCO47_RS14075;Name=CCO47_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14075;old_locus_tag=CCO47_14075 NZ_CP075113.1 Protein Homology CDS 2843906 2844238 . - 0 ID=cds-WP_094912442.1;Parent=gene-CCO47_RS14075;Dbxref=GenBank:WP_094912442.1;Name=WP_094912442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675826.1;locus_tag=CCO47_RS14075;product=hypothetical protein;protein_id=WP_094912442.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2844238 2848455 . - . ID=gene-CCO47_RS14080;Name=CCO47_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14080;old_locus_tag=CCO47_14080 NZ_CP075113.1 Protein Homology CDS 2844238 2848455 . - 0 ID=cds-WP_001675825.1;Parent=gene-CCO47_RS14080;Dbxref=GenBank:WP_001675825.1;Name=WP_001675825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675825.1;locus_tag=CCO47_RS14080;product=RHS element core protein;protein_id=WP_001675825.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2848557 2850671 . - . ID=gene-CCO47_RS14085;Name=CCO47_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14085;old_locus_tag=CCO47_14085 NZ_CP075113.1 Protein Homology CDS 2848557 2850671 . - 0 ID=cds-WP_000103458.1;Parent=gene-CCO47_RS14085;Dbxref=GenBank:WP_000103458.1;Name=WP_000103458.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000103445.1;locus_tag=CCO47_RS14085;product=type VI secretion system Vgr family protein;protein_id=WP_000103458.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2850893 2851411 . - . ID=gene-CCO47_RS14090;Name=CCO47_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14090;old_locus_tag=CCO47_14090 NZ_CP075113.1 Protein Homology CDS 2850893 2851411 . - 0 ID=cds-WP_001142966.1;Parent=gene-CCO47_RS14090;Dbxref=GenBank:WP_001142966.1;Name=WP_001142966.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308261.1;locus_tag=CCO47_RS14090;product=Hcp family type VI secretion system effector;protein_id=WP_001142966.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2851805 2851984 . - . ID=gene-CCO47_RS24455;Name=CCO47_RS24455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24455 NZ_CP075113.1 Protein Homology CDS 2851805 2851984 . - 0 ID=cds-WP_001112226.1;Parent=gene-CCO47_RS24455;Dbxref=GenBank:WP_001112226.1;Name=WP_001112226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112226.1;locus_tag=CCO47_RS24455;product=hypothetical protein;protein_id=WP_001112226.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2852041 2852544 . + . ID=gene-CCO47_RS14095;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=CCO47_RS14095;old_locus_tag=CCO47_14095 NZ_CP075113.1 Protein Homology CDS 2852041 2852544 . + 0 ID=cds-WP_000031252.1;Parent=gene-CCO47_RS14095;Dbxref=GenBank:WP_000031252.1;Name=WP_000031252.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308260.1;locus_tag=CCO47_RS14095;product=type VI secretion system contractile sheath small subunit;protein_id=WP_000031252.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2852835 2854307 . + . ID=gene-CCO47_RS14100;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=CCO47_RS14100;old_locus_tag=CCO47_14100 NZ_CP075113.1 Protein Homology CDS 2852835 2854307 . + 0 ID=cds-WP_000056999.1;Parent=gene-CCO47_RS14100;Dbxref=GenBank:WP_000056999.1;Name=WP_000056999.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000056998.1;locus_tag=CCO47_RS14100;product=type VI secretion system contractile sheath large subunit;protein_id=WP_000056999.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2854304 2854720 . + . ID=gene-CCO47_RS14105;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=CCO47_RS14105;old_locus_tag=CCO47_14105 NZ_CP075113.1 Protein Homology CDS 2854304 2854720 . + 0 ID=cds-WP_000611698.1;Parent=gene-CCO47_RS14105;Dbxref=GenBank:WP_000611698.1;Name=WP_000611698.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686004.1;locus_tag=CCO47_RS14105;product=type VI secretion system baseplate subunit TssE;protein_id=WP_000611698.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2854725 2856578 . + . ID=gene-CCO47_RS14110;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=CCO47_RS14110;old_locus_tag=CCO47_14110 NZ_CP075113.1 Protein Homology CDS 2854725 2856578 . + 0 ID=cds-WP_000393868.1;Parent=gene-CCO47_RS14110;Dbxref=GenBank:WP_000393868.1;Name=WP_000393868.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308256.1;locus_tag=CCO47_RS14110;product=type VI secretion system baseplate subunit TssF;protein_id=WP_000393868.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2856542 2857630 . + . ID=gene-CCO47_RS14115;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=CCO47_RS14115;old_locus_tag=CCO47_14115 NZ_CP075113.1 Protein Homology CDS 2856542 2857630 . + 0 ID=cds-WP_000509049.1;Parent=gene-CCO47_RS14115;Dbxref=GenBank:WP_000509049.1;Name=WP_000509049.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509052.1;locus_tag=CCO47_RS14115;product=type VI secretion system baseplate subunit TssG;protein_id=WP_000509049.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2857655 2858941 . + . ID=gene-CCO47_RS14120;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=CCO47_RS14120;old_locus_tag=CCO47_14120 NZ_CP075113.1 Protein Homology CDS 2857655 2858941 . + 0 ID=cds-WP_000796942.1;Parent=gene-CCO47_RS14120;Dbxref=GenBank:WP_000796942.1;Name=WP_000796942.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tagH;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308254.1;locus_tag=CCO47_RS14120;product=type VI secretion system-associated FHA domain protein TagH;protein_id=WP_000796942.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2858938 2859471 . + . ID=gene-CCO47_RS14125;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=CCO47_RS14125;old_locus_tag=CCO47_14125 NZ_CP075113.1 Protein Homology CDS 2858938 2859471 . + 0 ID=cds-WP_000147702.1;Parent=gene-CCO47_RS14125;Dbxref=GenBank:WP_000147702.1;Name=WP_000147702.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308253.1;locus_tag=CCO47_RS14125;product=type VI secretion system lipoprotein TssJ;protein_id=WP_000147702.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2859474 2860805 . + . ID=gene-CCO47_RS14130;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=CCO47_RS14130;old_locus_tag=CCO47_14130 NZ_CP075113.1 Protein Homology CDS 2859474 2860805 . + 0 ID=cds-WP_000246455.1;Parent=gene-CCO47_RS14130;Dbxref=GenBank:WP_000246455.1;Name=WP_000246455.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308252.1;locus_tag=CCO47_RS14130;product=type VI secretion system baseplate subunit TssK;protein_id=WP_000246455.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2860810 2861568 . + . ID=gene-CCO47_RS14135;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=CCO47_RS14135;old_locus_tag=CCO47_14135 NZ_CP075113.1 Protein Homology CDS 2860810 2861568 . + 0 ID=cds-WP_000343978.1;Parent=gene-CCO47_RS14135;Dbxref=GenBank:WP_000343978.1;Name=WP_000343978.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343977.1;locus_tag=CCO47_RS14135;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_000343978.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2861581 2864316 . + . ID=gene-CCO47_RS14140;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=CCO47_RS14140;old_locus_tag=CCO47_14140 NZ_CP075113.1 Protein Homology CDS 2861581 2864316 . + 0 ID=cds-WP_000614299.1;Parent=gene-CCO47_RS14140;Dbxref=GenBank:WP_000614299.1;Name=WP_000614299.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000614299.1;locus_tag=CCO47_RS14140;product=type VI secretion system ATPase TssH;protein_id=WP_000614299.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2864313 2865050 . + . ID=gene-CCO47_RS14145;Name=vasI;gbkey=Gene;gene=vasI;gene_biotype=protein_coding;locus_tag=CCO47_RS14145;old_locus_tag=CCO47_14145 NZ_CP075113.1 Protein Homology CDS 2864313 2865050 . + 0 ID=cds-WP_000089148.1;Parent=gene-CCO47_RS14145;Dbxref=GenBank:WP_000089148.1;Name=WP_000089148.1;gbkey=CDS;gene=vasI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089149.1;locus_tag=CCO47_RS14145;product=type VI secretion system-associated protein VasI;protein_id=WP_000089148.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2865052 2866464 . + . ID=gene-CCO47_RS14150;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=CCO47_RS14150;old_locus_tag=CCO47_14150 NZ_CP075113.1 Protein Homology CDS 2865052 2866464 . + 0 ID=cds-WP_000365803.1;Parent=gene-CCO47_RS14150;Dbxref=GenBank:WP_000365803.1;Name=WP_000365803.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752219.1;locus_tag=CCO47_RS14150;product=type VI secretion system protein TssA;protein_id=WP_000365803.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2866543 2870004 . + . ID=gene-CCO47_RS14155;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=CCO47_RS14155;old_locus_tag=CCO47_14155 NZ_CP075113.1 Protein Homology CDS 2866543 2870004 . + 0 ID=cds-WP_001137104.1;Parent=gene-CCO47_RS14155;Dbxref=GenBank:WP_001137104.1;Name=WP_001137104.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssM;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003914744.1;locus_tag=CCO47_RS14155;product=type VI secretion system membrane subunit TssM;protein_id=WP_001137104.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2870015 2871379 . + . ID=gene-CCO47_RS14160;Name=impA;gbkey=Gene;gene=impA;gene_biotype=protein_coding;locus_tag=CCO47_RS14160;old_locus_tag=CCO47_14160 NZ_CP075113.1 Protein Homology CDS 2870015 2871379 . + 0 ID=cds-WP_000076066.1;Parent=gene-CCO47_RS14160;Dbxref=GenBank:WP_000076066.1;Name=WP_000076066.1;gbkey=CDS;gene=impA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000076066.1;locus_tag=CCO47_RS14160;product=type VI secretion system protein ImpA;protein_id=WP_000076066.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2871395 2871874 . + . ID=gene-CCO47_RS14165;Name=CCO47_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14165;old_locus_tag=CCO47_14165 NZ_CP075113.1 Protein Homology CDS 2871395 2871874 . + 0 ID=cds-WP_001284963.1;Parent=gene-CCO47_RS14165;Dbxref=GenBank:WP_001284963.1;Name=WP_001284963.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284963.1;locus_tag=CCO47_RS14165;product=Hcp family type VI secretion system effector;protein_id=WP_001284963.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2871907 2872779 . + . ID=gene-CCO47_RS14170;Name=CCO47_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14170;old_locus_tag=CCO47_14170 NZ_CP075113.1 Protein Homology CDS 2871907 2872779 . + 0 ID=cds-WP_000248210.1;Parent=gene-CCO47_RS14170;Dbxref=GenBank:WP_000248210.1;Name=WP_000248210.1;Ontology_term=GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712141.1;locus_tag=CCO47_RS14170;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_000248210.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2872799 2873239 . + . ID=gene-CCO47_RS14175;Name=CCO47_RS14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14175;old_locus_tag=CCO47_14175 NZ_CP075113.1 Protein Homology CDS 2872799 2873239 . + 0 ID=cds-WP_001022121.1;Parent=gene-CCO47_RS14175;Dbxref=GenBank:WP_001022121.1;Name=WP_001022121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001022123.1;locus_tag=CCO47_RS14175;product=lysozyme inhibitor LprI family protein;protein_id=WP_001022121.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2873248 2873619 . + . ID=gene-CCO47_RS14180;Name=CCO47_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14180;old_locus_tag=CCO47_14180 NZ_CP075113.1 Protein Homology CDS 2873248 2873619 . + 0 ID=cds-WP_001675823.1;Parent=gene-CCO47_RS14180;Dbxref=GenBank:WP_001675823.1;Name=WP_001675823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747240.1;locus_tag=CCO47_RS14180;product=hypothetical protein;protein_id=WP_001675823.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2873743 2874201 . + . ID=gene-CCO47_RS14185;Name=CCO47_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14185;old_locus_tag=CCO47_14185 NZ_CP075113.1 Protein Homology CDS 2873743 2874201 . + 0 ID=cds-WP_000623372.1;Parent=gene-CCO47_RS14185;Dbxref=GenBank:WP_000623372.1;Name=WP_000623372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000623372.1;locus_tag=CCO47_RS14185;product=lysozyme inhibitor LprI family protein;protein_id=WP_000623372.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2874802 2875020 . - . ID=gene-CCO47_RS14190;Name=CCO47_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14190;old_locus_tag=CCO47_14190 NZ_CP075113.1 Protein Homology CDS 2874802 2875020 . - 0 ID=cds-WP_000880617.1;Parent=gene-CCO47_RS14190;Dbxref=GenBank:WP_000880617.1;Name=WP_000880617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000880618.1;locus_tag=CCO47_RS14190;product=hypothetical protein;protein_id=WP_000880617.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2875051 2875344 . + . ID=gene-CCO47_RS14195;Name=CCO47_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14195;old_locus_tag=CCO47_14195 NZ_CP075113.1 Protein Homology CDS 2875051 2875344 . + 0 ID=cds-WP_000114401.1;Parent=gene-CCO47_RS14195;Dbxref=GenBank:WP_000114401.1;Name=WP_000114401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806398.1;locus_tag=CCO47_RS14195;product=YciI family protein;protein_id=WP_000114401.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2875511 2876617 . - . ID=gene-CCO47_RS14200;Name=CCO47_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14200;old_locus_tag=CCO47_14200 NZ_CP075113.1 Protein Homology CDS 2875511 2876617 . - 0 ID=cds-WP_000988586.1;Parent=gene-CCO47_RS14200;Dbxref=GenBank:WP_000988586.1;Name=WP_000988586.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460105.1;locus_tag=CCO47_RS14200;product=Gfo/Idh/MocA family protein;protein_id=WP_000988586.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2876628 2877909 . - . ID=gene-CCO47_RS14205;Name=CCO47_RS14205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS14205;old_locus_tag=CCO47_14205;pseudo=true NZ_CP075113.1 Protein Homology CDS 2876628 2877909 . - 0 ID=cds-CCO47_RS14205;Parent=gene-CCO47_RS14205;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460104.1;locus_tag=CCO47_RS14205;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2878192 2878884 . - . ID=gene-CCO47_RS14210;Name=CCO47_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14210;old_locus_tag=CCO47_14210 NZ_CP075113.1 Protein Homology CDS 2878192 2878884 . - 0 ID=cds-WP_000700611.1;Parent=gene-CCO47_RS14210;Dbxref=GenBank:WP_000700611.1;Name=WP_000700611.1;Ontology_term=GO:0015772,GO:0034219,GO:0015288;gbkey=CDS;go_function=porin activity|0015288||IEA;go_process=oligosaccharide transport|0015772||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460103.1;locus_tag=CCO47_RS14210;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_000700611.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2878929 2880083 . - . ID=gene-CCO47_RS14215;Name=CCO47_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14215;old_locus_tag=CCO47_14215 NZ_CP075113.1 Protein Homology CDS 2878929 2880083 . - 0 ID=cds-WP_000525768.1;Parent=gene-CCO47_RS14215;Dbxref=GenBank:WP_000525768.1;Name=WP_000525768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460102.1;locus_tag=CCO47_RS14215;product=N-acetylneuraminate epimerase;protein_id=WP_000525768.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2880589 2881269 . + . ID=gene-CCO47_RS14220;Name=CCO47_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14220;old_locus_tag=CCO47_14220 NZ_CP075113.1 Protein Homology CDS 2880589 2881269 . + 0 ID=cds-WP_000054241.1;Parent=gene-CCO47_RS14220;Dbxref=GenBank:WP_000054241.1;Name=WP_000054241.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460101.1;locus_tag=CCO47_RS14220;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054241.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2881606 2883102 . + . ID=gene-CCO47_RS14225;Name=CCO47_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14225;old_locus_tag=CCO47_14225 NZ_CP075113.1 Protein Homology CDS 2881606 2883102 . + 0 ID=cds-WP_000628085.1;Parent=gene-CCO47_RS14225;Dbxref=GenBank:WP_000628085.1;Name=WP_000628085.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460100.1;locus_tag=CCO47_RS14225;product=sodium:solute symporter family protein;protein_id=WP_000628085.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2883388 2884269 . + . ID=gene-CCO47_RS14230;Name=CCO47_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14230;old_locus_tag=CCO47_14230 NZ_CP075113.1 Protein Homology CDS 2883388 2884269 . + 0 ID=cds-WP_000433673.1;Parent=gene-CCO47_RS14230;Dbxref=GenBank:WP_000433673.1;Name=WP_000433673.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460099.1;locus_tag=CCO47_RS14230;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000433673.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2884375 2885163 . - . ID=gene-CCO47_RS14235;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=CCO47_RS14235;old_locus_tag=CCO47_14235 NZ_CP075113.1 Protein Homology CDS 2884375 2885163 . - 0 ID=cds-WP_000533528.1;Parent=gene-CCO47_RS14235;Dbxref=GenBank:WP_000533528.1;Name=WP_000533528.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=CCO47_RS14235;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000533528.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2886056 2887564 . - . ID=gene-CCO47_RS14240;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=CCO47_RS14240;old_locus_tag=CCO47_14240 NZ_CP075113.1 Protein Homology CDS 2886056 2887564 . - 0 ID=cds-WP_001018467.1;Parent=gene-CCO47_RS14240;Dbxref=GenBank:WP_001018467.1;Name=WP_001018467.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460097.1;locus_tag=CCO47_RS14240;product=sodium/proline symporter PutP;protein_id=WP_001018467.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2887985 2891947 . + . ID=gene-CCO47_RS14245;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=CCO47_RS14245;old_locus_tag=CCO47_14245 NZ_CP075113.1 Protein Homology CDS 2887985 2891947 . + 0 ID=cds-WP_001675819.1;Parent=gene-CCO47_RS14245;Dbxref=GenBank:WP_001675819.1;Name=WP_001675819.1;Ontology_term=GO:0006355,GO:0055129,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,L-glutamate gamma-semialdehyde dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=CCO47_RS14245;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_001675819.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2892006 2892401 . + . ID=gene-CCO47_RS14250;Name=CCO47_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14250;old_locus_tag=CCO47_14250 NZ_CP075113.1 Protein Homology CDS 2892006 2892401 . + 0 ID=cds-WP_000821066.1;Parent=gene-CCO47_RS14250;Dbxref=GenBank:WP_000821066.1;Name=WP_000821066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460095.1;locus_tag=CCO47_RS14250;product=lysozyme inhibitor LprI family protein;protein_id=WP_000821066.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2892398 2893036 . - . ID=gene-CCO47_RS14255;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=CCO47_RS14255;old_locus_tag=CCO47_14255 NZ_CP075113.1 Protein Homology CDS 2892398 2893036 . - 0 ID=cds-WP_000083130.1;Parent=gene-CCO47_RS14255;Dbxref=GenBank:WP_000083130.1;Name=WP_000083130.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460094.1;locus_tag=CCO47_RS14255;product=HTH-type transcriptional regulator RutR;protein_id=WP_000083130.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2893173 2893340 . - . ID=gene-CCO47_RS14260;Name=CCO47_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14260;old_locus_tag=CCO47_14260 NZ_CP075113.1 Protein Homology CDS 2893173 2893340 . - 0 ID=cds-WP_001273663.1;Parent=gene-CCO47_RS14260;Dbxref=GenBank:WP_001273663.1;Name=WP_001273663.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460093.1;locus_tag=CCO47_RS14260;product=con-10 family general stress protein;protein_id=WP_001273663.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2893725 2894321 . + . ID=gene-CCO47_RS14265;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=CCO47_RS14265;old_locus_tag=CCO47_14265 NZ_CP075113.1 Protein Homology CDS 2893725 2894321 . + 0 ID=cds-WP_001062898.1;Parent=gene-CCO47_RS14265;Dbxref=GenBank:WP_001062898.1;Name=WP_001062898.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=CCO47_RS14265;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001062898.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2894342 2894569 . + . ID=gene-CCO47_RS14270;Name=CCO47_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14270;old_locus_tag=CCO47_14270 NZ_CP075113.1 Protein Homology CDS 2894342 2894569 . + 0 ID=cds-WP_001143125.1;Parent=gene-CCO47_RS14270;Dbxref=GenBank:WP_001143125.1;Name=WP_001143125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=CCO47_RS14270;product=YccJ family protein;protein_id=WP_001143125.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2894602 2895843 . - . ID=gene-CCO47_RS14275;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=CCO47_RS14275;old_locus_tag=CCO47_14275 NZ_CP075113.1 Protein Homology CDS 2894602 2895843 . - 0 ID=cds-WP_000749193.1;Parent=gene-CCO47_RS14275;Dbxref=GenBank:WP_000749193.1;Name=WP_000749193.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=CCO47_RS14275;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_000749193.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2895976 2896482 . - . ID=gene-CCO47_RS14280;Name=CCO47_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14280;old_locus_tag=CCO47_14280 NZ_CP075113.1 Protein Homology CDS 2895976 2896482 . - 0 ID=cds-WP_000907523.1;Parent=gene-CCO47_RS14280;Dbxref=GenBank:WP_000907523.1;Name=WP_000907523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460089.1;locus_tag=CCO47_RS14280;product=protein disulfide oxidoreductase;protein_id=WP_000907523.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2896472 2897095 . - . ID=gene-CCO47_RS14285;Name=CCO47_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14285;old_locus_tag=CCO47_14285 NZ_CP075113.1 Protein Homology CDS 2896472 2897095 . - 0 ID=cds-WP_000876690.1;Parent=gene-CCO47_RS14285;Dbxref=GenBank:WP_000876690.1;Name=WP_000876690.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460088.1;locus_tag=CCO47_RS14285;product=DsbA family protein;protein_id=WP_000876690.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2897092 2898978 . - . ID=gene-CCO47_RS14290;Name=CCO47_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14290;old_locus_tag=CCO47_14290 NZ_CP075113.1 Protein Homology CDS 2897092 2898978 . - 0 ID=cds-WP_000972969.1;Parent=gene-CCO47_RS14290;Dbxref=GenBank:WP_000972969.1;Name=WP_000972969.1;Ontology_term=GO:0009055,GO:0015036;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460087.1;locus_tag=CCO47_RS14290;product=protein-disulfide reductase DsbD family protein;protein_id=WP_000972969.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2899027 2899389 . - . ID=gene-CCO47_RS14295;Name=CCO47_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14295;old_locus_tag=CCO47_14295 NZ_CP075113.1 Protein Homology CDS 2899027 2899389 . - 0 ID=cds-WP_001118898.1;Parent=gene-CCO47_RS14295;Dbxref=GenBank:WP_001118898.1;Name=WP_001118898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460086.1;locus_tag=CCO47_RS14295;product=copper resistance protein;protein_id=WP_001118898.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2899625 2900545 . + . ID=gene-CCO47_RS14300;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=CCO47_RS14300;old_locus_tag=CCO47_14300 NZ_CP075113.1 Protein Homology CDS 2899625 2900545 . + 0 ID=cds-WP_000420603.1;Parent=gene-CCO47_RS14300;Dbxref=GenBank:WP_000420603.1;Name=WP_000420603.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460085.1;locus_tag=CCO47_RS14300;product=curved DNA-binding protein;protein_id=WP_000420603.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2900545 2900850 . + . ID=gene-CCO47_RS14305;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=CCO47_RS14305;old_locus_tag=CCO47_14305 NZ_CP075113.1 Protein Homology CDS 2900545 2900850 . + 0 ID=cds-WP_001284251.1;Parent=gene-CCO47_RS14305;Dbxref=GenBank:WP_001284251.1;Name=WP_001284251.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460084.1;locus_tag=CCO47_RS14305;product=chaperone modulator CbpM;protein_id=WP_001284251.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2901504 2901866 . + . ID=gene-CCO47_RS14310;Name=CCO47_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14310;old_locus_tag=CCO47_14310 NZ_CP075113.1 Protein Homology CDS 2901504 2901866 . + 0 ID=cds-WP_001675818.1;Parent=gene-CCO47_RS14310;Dbxref=GenBank:WP_001675818.1;Name=WP_001675818.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=CCO47_RS14310;product=anti-adapter protein IraM;protein_id=WP_001675818.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2902274 2903212 . - . ID=gene-CCO47_RS14315;Name=CCO47_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14315;old_locus_tag=CCO47_14315 NZ_CP075113.1 Protein Homology CDS 2902274 2903212 . - 0 ID=cds-WP_000976563.1;Parent=gene-CCO47_RS14315;Dbxref=GenBank:WP_000976563.1;Name=WP_000976563.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460082.1;locus_tag=CCO47_RS14315;product=MBL fold metallo-hydrolase;protein_id=WP_000976563.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2903226 2904122 . - . ID=gene-CCO47_RS14320;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=CCO47_RS14320;old_locus_tag=CCO47_14320 NZ_CP075113.1 Protein Homology CDS 2903226 2904122 . - 0 ID=cds-WP_000336602.1;Parent=gene-CCO47_RS14320;Dbxref=GenBank:WP_000336602.1;Name=WP_000336602.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460081.1;locus_tag=CCO47_RS14320;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_000336602.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2904132 2905508 . - . ID=gene-CCO47_RS14325;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=CCO47_RS14325;old_locus_tag=CCO47_14325 NZ_CP075113.1 Protein Homology CDS 2904132 2905508 . - 0 ID=cds-WP_001285788.1;Parent=gene-CCO47_RS14325;Dbxref=GenBank:WP_001285788.1;Name=WP_001285788.1;Ontology_term=GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=CCO47_RS14325;product=4-hydroxyphenylacetate permease;protein_id=WP_001285788.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2905581 2906372 . - . ID=gene-CCO47_RS14330;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=CCO47_RS14330;old_locus_tag=CCO47_14330 NZ_CP075113.1 Protein Homology CDS 2905581 2906372 . - 0 ID=cds-WP_000785077.1;Parent=gene-CCO47_RS14330;Dbxref=GenBank:WP_000785077.1;Name=WP_000785077.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460079.1;locus_tag=CCO47_RS14330;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_000785077.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2906383 2907186 . - . ID=gene-CCO47_RS14335;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=CCO47_RS14335;old_locus_tag=CCO47_14335 NZ_CP075113.1 Protein Homology CDS 2906383 2907186 . - 0 ID=cds-WP_000884795.1;Parent=gene-CCO47_RS14335;Dbxref=GenBank:WP_000884795.1;Name=WP_000884795.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460078.1;locus_tag=CCO47_RS14335;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_000884795.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2907330 2907710 . - . ID=gene-CCO47_RS14340;Name=CCO47_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14340;old_locus_tag=CCO47_14340 NZ_CP075113.1 Protein Homology CDS 2907330 2907710 . - 0 ID=cds-WP_001119849.1;Parent=gene-CCO47_RS14340;Dbxref=GenBank:WP_001119849.1;Name=WP_001119849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=CCO47_RS14340;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_001119849.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2907720 2908571 . - . ID=gene-CCO47_RS14345;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=CCO47_RS14345;old_locus_tag=CCO47_14345 NZ_CP075113.1 Protein Homology CDS 2907720 2908571 . - 0 ID=cds-WP_000516978.1;Parent=gene-CCO47_RS14345;Dbxref=GenBank:WP_000516978.1;Name=WP_000516978.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=CCO47_RS14345;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_000516978.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2908573 2910039 . - . ID=gene-CCO47_RS14350;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=CCO47_RS14350;old_locus_tag=CCO47_14350 NZ_CP075113.1 Protein Homology CDS 2908573 2910039 . - 0 ID=cds-WP_000723528.1;Parent=gene-CCO47_RS14350;Dbxref=GenBank:WP_000723528.1;Name=WP_000723528.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=CCO47_RS14350;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_000723528.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2910036 2911325 . - . ID=gene-CCO47_RS14355;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=CCO47_RS14355;old_locus_tag=CCO47_14355 NZ_CP075113.1 Protein Homology CDS 2910036 2911325 . - 0 ID=cds-WP_000679212.1;Parent=gene-CCO47_RS14355;Dbxref=GenBank:WP_000679212.1;Name=WP_000679212.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=CCO47_RS14355;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WP_000679212.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2911601 2912041 . + . ID=gene-CCO47_RS14360;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=CCO47_RS14360;old_locus_tag=CCO47_14360 NZ_CP075113.1 Protein Homology CDS 2911601 2912041 . + 0 ID=cds-WP_000543922.1;Parent=gene-CCO47_RS14360;Dbxref=GenBank:WP_000543922.1;Name=WP_000543922.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460073.1;locus_tag=CCO47_RS14360;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_000543922.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2912259 2913821 . + . ID=gene-CCO47_RS14365;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=CCO47_RS14365;old_locus_tag=CCO47_14365 NZ_CP075113.1 Protein Homology CDS 2912259 2913821 . + 0 ID=cds-WP_000801492.1;Parent=gene-CCO47_RS14365;Dbxref=GenBank:WP_000801492.1;Name=WP_000801492.1;Ontology_term=GO:0010124,GO:0016712,GO:0050660;gbkey=CDS;gene=hpaB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C reduced flavin or flavoprotein as one donor%2C and incorporation of one atom of oxygen|0016712||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=CCO47_RS14365;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_000801492.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2913839 2914351 . + . ID=gene-CCO47_RS14370;Name=CCO47_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14370;old_locus_tag=CCO47_14370 NZ_CP075113.1 Protein Homology CDS 2913839 2914351 . + 0 ID=cds-WP_001195550.1;Parent=gene-CCO47_RS14370;Dbxref=GenBank:WP_001195550.1;Name=WP_001195550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460071.1;locus_tag=CCO47_RS14370;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WP_001195550.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2914684 2915040 . - . ID=gene-CCO47_RS14375;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=CCO47_RS14375;old_locus_tag=CCO47_14375 NZ_CP075113.1 Protein Homology CDS 2914684 2915040 . - 0 ID=cds-WP_001574144.1;Parent=gene-CCO47_RS14375;Dbxref=GenBank:WP_001574144.1;Name=WP_001574144.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439826.1;locus_tag=CCO47_RS14375;product=hydroxyisourate hydrolase;protein_id=WP_001574144.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2915230 2915910 . + . ID=gene-CCO47_RS14380;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=CCO47_RS14380;old_locus_tag=CCO47_14380 NZ_CP075113.1 Protein Homology CDS 2915230 2915910 . + 0 ID=cds-WP_000698209.1;Parent=gene-CCO47_RS14380;Dbxref=GenBank:WP_000698209.1;Name=WP_000698209.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698203.1;locus_tag=CCO47_RS14380;product=response regulator transcription factor HprR;protein_id=WP_000698209.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2915903 2917267 . + . ID=gene-CCO47_RS14385;Name=CCO47_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14385;old_locus_tag=CCO47_14385 NZ_CP075113.1 Protein Homology CDS 2915903 2917267 . + 0 ID=cds-WP_000240029.1;Parent=gene-CCO47_RS14385;Dbxref=GenBank:WP_000240029.1;Name=WP_000240029.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447527.1;locus_tag=CCO47_RS14385;product=heavy metal sensor histidine kinase;protein_id=WP_000240029.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2917440 2918909 . + . ID=gene-CCO47_RS14390;Name=CCO47_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14390;old_locus_tag=CCO47_14390 NZ_CP075113.1 Protein Homology CDS 2917440 2918909 . + 0 ID=cds-WP_000760236.1;Parent=gene-CCO47_RS14390;Dbxref=GenBank:WP_000760236.1;Name=WP_000760236.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460067.1;locus_tag=CCO47_RS14390;product=C69 family dipeptidase;protein_id=WP_000760236.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2919018 2919128 . + . ID=gene-CCO47_RS14395;Name=CCO47_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14395;old_locus_tag=CCO47_14395 NZ_CP075113.1 Protein Homology CDS 2919018 2919128 . + 0 ID=cds-WP_000174813.1;Parent=gene-CCO47_RS14395;Dbxref=GenBank:WP_000174813.1;Name=WP_000174813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=CCO47_RS14395;product=hypothetical protein;protein_id=WP_000174813.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2919129 2919299 . - . ID=gene-CCO47_RS14400;Name=CCO47_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14400;old_locus_tag=CCO47_14400 NZ_CP075113.1 Protein Homology CDS 2919129 2919299 . - 0 ID=cds-WP_001111006.1;Parent=gene-CCO47_RS14400;Dbxref=GenBank:WP_001111006.1;Name=WP_001111006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460065.1;locus_tag=CCO47_RS14400;product=YlcI/YnfO family protein;protein_id=WP_001111006.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2919631 2921316 . + . ID=gene-CCO47_RS14405;Name=sopB;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;locus_tag=CCO47_RS14405;old_locus_tag=CCO47_14405 NZ_CP075113.1 Protein Homology CDS 2919631 2921316 . + 0 ID=cds-WP_001166952.1;Parent=gene-CCO47_RS14405;Dbxref=GenBank:WP_001166952.1;Name=WP_001166952.1;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460064.1;locus_tag=CCO47_RS14405;product=SPI-1 type III secretion system effector inositol phosphate phosphatase SopB;protein_id=WP_001166952.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2921333 2921674 . + . ID=gene-CCO47_RS14410;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=CCO47_RS14410;old_locus_tag=CCO47_14410 NZ_CP075113.1 Protein Homology CDS 2921333 2921674 . + 0 ID=cds-WP_000444720.1;Parent=gene-CCO47_RS14410;Dbxref=GenBank:WP_000444720.1;Name=WP_000444720.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460063.1;locus_tag=CCO47_RS14410;product=type III secretion system chaperone SigE;protein_id=WP_000444720.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2921684 2922007 . - . ID=gene-CCO47_RS14415;Name=CCO47_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14415;old_locus_tag=CCO47_14415 NZ_CP075113.1 Protein Homology CDS 2921684 2922007 . - 0 ID=cds-WP_077906650.1;Parent=gene-CCO47_RS14415;Dbxref=GenBank:WP_077906650.1;Name=WP_077906650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539657.1;locus_tag=CCO47_RS14415;product=hypothetical protein;protein_id=WP_077906650.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2922222 2923097 . + . ID=gene-CCO47_RS14420;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=CCO47_RS14420;old_locus_tag=CCO47_14420 NZ_CP075113.1 Protein Homology CDS 2922222 2923097 . + 0 ID=cds-WP_001123035.1;Parent=gene-CCO47_RS14420;Dbxref=GenBank:WP_001123035.1;Name=WP_001123035.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460061.1;locus_tag=CCO47_RS14420;product=SPI-2 type III secretion system effector PipB;protein_id=WP_001123035.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2923319 2923999 . + . ID=gene-CCO47_RS14425;Name=pipA;gbkey=Gene;gene=pipA;gene_biotype=protein_coding;locus_tag=CCO47_RS14425;old_locus_tag=CCO47_14425 NZ_CP075113.1 Protein Homology CDS 2923319 2923999 . + 0 ID=cds-WP_000938188.1;Parent=gene-CCO47_RS14425;Dbxref=GenBank:WP_000938188.1;Name=WP_000938188.1;gbkey=CDS;gene=pipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460060.1;locus_tag=CCO47_RS14425;product=type III secretion system effector protease PipA;protein_id=WP_000938188.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2924156 2924243 . - . ID=gene-CCO47_RS14430;Name=CCO47_RS14430;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS14430;old_locus_tag=CCO47_14430 NZ_CP075113.1 tRNAscan-SE tRNA 2924156 2924243 . - . ID=rna-CCO47_RS14430;Parent=gene-CCO47_RS14430;anticodon=(pos:complement(2924207..2924209));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS14430;product=tRNA-Ser NZ_CP075113.1 tRNAscan-SE exon 2924156 2924243 . - . ID=exon-CCO47_RS14430-1;Parent=rna-CCO47_RS14430;anticodon=(pos:complement(2924207..2924209));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS14430;product=tRNA-Ser NZ_CP075113.1 RefSeq gene 2924638 2925297 . + . ID=gene-CCO47_RS14435;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=CCO47_RS14435;old_locus_tag=CCO47_14435 NZ_CP075113.1 Protein Homology CDS 2924638 2925297 . + 0 ID=cds-WP_000374046.1;Parent=gene-CCO47_RS14435;Dbxref=GenBank:WP_000374046.1;Name=WP_000374046.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=CCO47_RS14435;product=FtsH protease modulator YccA;protein_id=WP_000374046.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2925384 2925713 . + . ID=gene-CCO47_RS14440;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=CCO47_RS14440;old_locus_tag=CCO47_14440 NZ_CP075113.1 Protein Homology CDS 2925384 2925713 . + 0 ID=cds-WP_000904446.1;Parent=gene-CCO47_RS14440;Dbxref=GenBank:WP_000904446.1;Name=WP_000904446.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460058.1;locus_tag=CCO47_RS14440;product=sulfurtransferase TusE;protein_id=WP_000904446.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2925710 2925991 . - . ID=gene-CCO47_RS14445;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=CCO47_RS14445;old_locus_tag=CCO47_14445 NZ_CP075113.1 Protein Homology CDS 2925710 2925991 . - 0 ID=cds-WP_000072884.1;Parent=gene-CCO47_RS14445;Dbxref=GenBank:WP_000072884.1;Name=WP_000072884.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460057.1;locus_tag=CCO47_RS14445;product=acylphosphatase;protein_id=WP_000072884.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2926040 2926819 . - . ID=gene-CCO47_RS14450;Name=CCO47_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14450;old_locus_tag=CCO47_14450 NZ_CP075113.1 Protein Homology CDS 2926040 2926819 . - 0 ID=cds-WP_000548091.1;Parent=gene-CCO47_RS14450;Dbxref=GenBank:WP_000548091.1;Name=WP_000548091.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=CCO47_RS14450;product=helix-turn-helix transcriptional regulator;protein_id=WP_000548091.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2926845 2927393 . - . ID=gene-CCO47_RS14455;Name=CCO47_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14455;old_locus_tag=CCO47_14455 NZ_CP075113.1 Protein Homology CDS 2926845 2927393 . - 0 ID=cds-WP_000859415.1;Parent=gene-CCO47_RS14455;Dbxref=GenBank:WP_000859415.1;Name=WP_000859415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=CCO47_RS14455;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_000859415.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2927608 2928819 . + . ID=gene-CCO47_RS14460;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=CCO47_RS14460;old_locus_tag=CCO47_14460 NZ_CP075113.1 Protein Homology CDS 2927608 2928819 . + 0 ID=cds-WP_000140480.1;Parent=gene-CCO47_RS14460;Dbxref=GenBank:WP_000140480.1;Name=WP_000140480.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=CCO47_RS14460;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_000140480.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2928877 2929194 . + . ID=gene-CCO47_RS14465;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=CCO47_RS14465;old_locus_tag=CCO47_14465 NZ_CP075113.1 Protein Homology CDS 2928877 2929194 . + 0 ID=cds-WP_000561983.1;Parent=gene-CCO47_RS14465;Dbxref=GenBank:WP_000561983.1;Name=WP_000561983.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=CCO47_RS14465;product=heat shock protein HspQ;protein_id=WP_000561983.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2929239 2929652 . - . ID=gene-CCO47_RS14470;Name=CCO47_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14470;old_locus_tag=CCO47_14470 NZ_CP075113.1 Protein Homology CDS 2929239 2929652 . - 0 ID=cds-WP_001537782.1;Parent=gene-CCO47_RS14470;Dbxref=GenBank:WP_001537782.1;Name=WP_001537782.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=CCO47_RS14470;product=CoA-binding protein;protein_id=WP_001537782.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2929826 2930488 . + . ID=gene-CCO47_RS14475;Name=CCO47_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14475;old_locus_tag=CCO47_14475 NZ_CP075113.1 Protein Homology CDS 2929826 2930488 . + 0 ID=cds-WP_000847736.1;Parent=gene-CCO47_RS14475;Dbxref=GenBank:WP_000847736.1;Name=WP_000847736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460051.1;locus_tag=CCO47_RS14475;product=DUF2057 family protein;protein_id=WP_000847736.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2930583 2931041 . + . ID=gene-CCO47_RS14480;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=CCO47_RS14480;old_locus_tag=CCO47_14480 NZ_CP075113.1 Protein Homology CDS 2930583 2931041 . + 0 ID=cds-WP_000424187.1;Parent=gene-CCO47_RS14480;Dbxref=GenBank:WP_000424187.1;Name=WP_000424187.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460050.1;locus_tag=CCO47_RS14480;product=methylglyoxal synthase;protein_id=WP_000424187.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2931077 2933131 . - . ID=gene-CCO47_RS14485;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=CCO47_RS14485;old_locus_tag=CCO47_14485 NZ_CP075113.1 Protein Homology CDS 2931077 2933131 . - 0 ID=cds-WP_000420503.1;Parent=gene-CCO47_RS14485;Dbxref=GenBank:WP_000420503.1;Name=WP_000420503.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=CCO47_RS14485;product=DNA helicase IV;protein_id=WP_000420503.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2933255 2933701 . + . ID=gene-CCO47_RS14490;Name=CCO47_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14490;old_locus_tag=CCO47_14490 NZ_CP075113.1 Protein Homology CDS 2933255 2933701 . + 0 ID=cds-WP_001261222.1;Parent=gene-CCO47_RS14490;Dbxref=GenBank:WP_001261222.1;Name=WP_001261222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460048.1;locus_tag=CCO47_RS14490;product=YccF domain-containing protein;protein_id=WP_001261222.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2933720 2935873 . + . ID=gene-CCO47_RS14495;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=CCO47_RS14495;old_locus_tag=CCO47_14495 NZ_CP075113.1 Protein Homology CDS 2933720 2935873 . + 0 ID=cds-WP_000950876.1;Parent=gene-CCO47_RS14495;Dbxref=GenBank:WP_000950876.1;Name=WP_000950876.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460047.1;locus_tag=CCO47_RS14495;product=YccS family putative transporter;protein_id=WP_000950876.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2935860 2936465 . - . ID=gene-CCO47_RS14500;Name=CCO47_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14500;old_locus_tag=CCO47_14500 NZ_CP075113.1 Protein Homology CDS 2935860 2936465 . - 0 ID=cds-WP_001202375.1;Parent=gene-CCO47_RS14500;Dbxref=GenBank:WP_001202375.1;Name=WP_001202375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=CCO47_RS14500;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_001202375.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2936682 2937191 . + . ID=gene-CCO47_RS14505;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=CCO47_RS14505;old_locus_tag=CCO47_14505 NZ_CP075113.1 Protein Homology CDS 2936682 2937191 . + 0 ID=cds-WP_000288733.1;Parent=gene-CCO47_RS14505;Dbxref=GenBank:WP_000288733.1;Name=WP_000288733.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460045.1;locus_tag=CCO47_RS14505;product=SOS-induced cell division inhibitor SulA;protein_id=WP_000288733.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2937548 2938600 . + . ID=gene-CCO47_RS14510;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=CCO47_RS14510;old_locus_tag=CCO47_14510 NZ_CP075113.1 Protein Homology CDS 2937548 2938600 . + 0 ID=cds-WP_001674965.1;Parent=gene-CCO47_RS14510;Dbxref=GenBank:WP_001674965.1;Name=WP_001674965.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460044.1;locus_tag=CCO47_RS14510;product=porin OmpA;protein_id=WP_001674965.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2938672 2939124 . - . ID=gene-CCO47_RS14515;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=CCO47_RS14515;old_locus_tag=CCO47_14515 NZ_CP075113.1 Protein Homology CDS 2938672 2939124 . - 0 ID=cds-WP_000877172.1;Parent=gene-CCO47_RS14515;Dbxref=GenBank:WP_000877172.1;Name=WP_000877172.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=CCO47_RS14515;product=macrodomain Ter protein MatP;protein_id=WP_000877172.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2939310 2941070 . + . ID=gene-CCO47_RS14520;Name=CCO47_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14520;old_locus_tag=CCO47_14520 NZ_CP075113.1 Protein Homology CDS 2939310 2941070 . + 0 ID=cds-WP_000156448.1;Parent=gene-CCO47_RS14520;Dbxref=GenBank:WP_000156448.1;Name=WP_000156448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460042.1;locus_tag=CCO47_RS14520;product=AAA family ATPase;protein_id=WP_000156448.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2941139 2941657 . + . ID=gene-CCO47_RS14525;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=CCO47_RS14525;old_locus_tag=CCO47_14525 NZ_CP075113.1 Protein Homology CDS 2941139 2941657 . + 0 ID=cds-WP_000227928.1;Parent=gene-CCO47_RS14525;Dbxref=GenBank:WP_000227928.1;Name=WP_000227928.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=CCO47_RS14525;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227928.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2941757 2941924 . - . ID=gene-CCO47_RS14530;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=CCO47_RS14530;old_locus_tag=CCO47_14530 NZ_CP075113.1 Protein Homology CDS 2941757 2941924 . - 0 ID=cds-WP_001537784.1;Parent=gene-CCO47_RS14530;Dbxref=GenBank:WP_001537784.1;Name=WP_001537784.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=CCO47_RS14530;product=ribosome modulation factor;protein_id=WP_001537784.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2942180 2942743 . - . ID=gene-CCO47_RS14535;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=CCO47_RS14535;old_locus_tag=CCO47_14535 NZ_CP075113.1 Protein Homology CDS 2942180 2942743 . - 0 ID=cds-WP_000759134.1;Parent=gene-CCO47_RS14535;Dbxref=GenBank:WP_000759134.1;Name=WP_000759134.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460039.1;locus_tag=CCO47_RS14535;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759134.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2942740 2944380 . - . ID=gene-CCO47_RS14540;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=CCO47_RS14540;old_locus_tag=CCO47_14540 NZ_CP075113.1 Protein Homology CDS 2942740 2944380 . - 0 ID=cds-WP_000433414.1;Parent=gene-CCO47_RS14540;Dbxref=GenBank:WP_000433414.1;Name=WP_000433414.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=CCO47_RS14540;product=intermembrane transport protein PqiB;protein_id=WP_000433414.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2944385 2945638 . - . ID=gene-CCO47_RS14545;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=CCO47_RS14545;old_locus_tag=CCO47_14545 NZ_CP075113.1 Protein Homology CDS 2944385 2945638 . - 0 ID=cds-WP_000333152.1;Parent=gene-CCO47_RS14545;Dbxref=GenBank:WP_000333152.1;Name=WP_000333152.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460037.1;locus_tag=CCO47_RS14545;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_000333152.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2945653 2947560 . - . ID=gene-CCO47_RS14550;Name=CCO47_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14550;old_locus_tag=CCO47_14550 NZ_CP075113.1 Protein Homology CDS 2945653 2947560 . - 0 ID=cds-WP_000053044.1;Parent=gene-CCO47_RS14550;Dbxref=GenBank:WP_000053044.1;Name=WP_000053044.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=CCO47_RS14550;product=ABC transporter ATP-binding protein;protein_id=WP_000053044.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2947573 2949681 . - . ID=gene-CCO47_RS14555;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=CCO47_RS14555;old_locus_tag=CCO47_14555 NZ_CP075113.1 Protein Homology CDS 2947573 2949681 . - 0 ID=cds-WP_001086485.1;Parent=gene-CCO47_RS14555;Dbxref=GenBank:WP_001086485.1;Name=WP_001086485.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=CCO47_RS14555;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_001086485.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2949780 2950889 . + . ID=gene-CCO47_RS14560;Name=CCO47_RS14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14560;old_locus_tag=CCO47_14560 NZ_CP075113.1 Protein Homology CDS 2949780 2950889 . + 0 ID=cds-WP_000224079.1;Parent=gene-CCO47_RS14560;Dbxref=GenBank:WP_000224079.1;Name=WP_000224079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460034.1;locus_tag=CCO47_RS14560;product=YcbX family protein;protein_id=WP_000224079.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2950886 2951428 . - . ID=gene-CCO47_RS14565;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=CCO47_RS14565;old_locus_tag=CCO47_14565 NZ_CP075113.1 Protein Homology CDS 2950886 2951428 . - 0 ID=cds-WP_001574119.1;Parent=gene-CCO47_RS14565;Dbxref=GenBank:WP_001574119.1;Name=WP_001574119.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=CCO47_RS14565;product=cell division protein ZapC;protein_id=WP_001574119.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2951594 2952604 . - . ID=gene-CCO47_RS14570;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=CCO47_RS14570;old_locus_tag=CCO47_14570 NZ_CP075113.1 Protein Homology CDS 2951594 2952604 . - 0 ID=cds-WP_000291723.1;Parent=gene-CCO47_RS14570;Dbxref=GenBank:WP_000291723.1;Name=WP_000291723.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=CCO47_RS14570;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_000291723.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2952812 2955424 . - . ID=gene-CCO47_RS14575;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=CCO47_RS14575;old_locus_tag=CCO47_14575 NZ_CP075113.1 Protein Homology CDS 2952812 2955424 . - 0 ID=cds-WP_000193790.1;Parent=gene-CCO47_RS14575;Dbxref=GenBank:WP_000193790.1;Name=WP_000193790.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=CCO47_RS14575;product=aminopeptidase N;protein_id=WP_000193790.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2955851 2956042 . + . ID=gene-CCO47_RS14580;Name=CCO47_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14580;old_locus_tag=CCO47_14580 NZ_CP075113.1 Protein Homology CDS 2955851 2956042 . + 0 ID=cds-WP_000497439.1;Parent=gene-CCO47_RS14580;Dbxref=GenBank:WP_000497439.1;Name=WP_000497439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460030.1;locus_tag=CCO47_RS14580;product=DinI-like family protein;protein_id=WP_000497439.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2956313 2956999 . + . ID=gene-CCO47_RS14585;Name=gtgE;gbkey=Gene;gene=gtgE;gene_biotype=protein_coding;locus_tag=CCO47_RS14585;old_locus_tag=CCO47_14585 NZ_CP075113.1 Protein Homology CDS 2956313 2956999 . + 0 ID=cds-WP_001525490.1;Parent=gene-CCO47_RS14585;Dbxref=GenBank:WP_001525490.1;Name=WP_001525490.1;gbkey=CDS;gene=gtgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460029.1;locus_tag=CCO47_RS14585;product=virulence effector protease GtgE;protein_id=WP_001525490.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2956984 2957290 . + . ID=gene-CCO47_RS14590;Name=CCO47_RS14590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS14590;old_locus_tag=CCO47_14590;pseudo=true NZ_CP075113.1 Protein Homology CDS 2956984 2957290 . + 0 ID=cds-CCO47_RS14590;Parent=gene-CCO47_RS14590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460028.1;locus_tag=CCO47_RS14590;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2957359 2957985 . + . ID=gene-CCO47_RS14595;Name=CCO47_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14595;old_locus_tag=CCO47_14595 NZ_CP075113.1 Protein Homology CDS 2957359 2957985 . + 0 ID=cds-WP_000334547.1;Parent=gene-CCO47_RS14595;Dbxref=GenBank:WP_000334547.1;Name=WP_000334547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460027.1;locus_tag=CCO47_RS14595;product=SOS response-associated peptidase;protein_id=WP_000334547.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2958117 2958535 . - . ID=gene-CCO47_RS14600;Name=CCO47_RS14600;end_range=2958535,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS14600;old_locus_tag=CCO47_14600;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 2958117 2958535 . - 0 ID=cds-CCO47_RS14600;Parent=gene-CCO47_RS14600;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2958535,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611684.1;locus_tag=CCO47_RS14600;partial=true;product=IS66 family transposase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2958633 2959601 . - . ID=gene-CCO47_RS14605;Name=sseI;gbkey=Gene;gene=sseI;gene_biotype=protein_coding;locus_tag=CCO47_RS14605;old_locus_tag=CCO47_14605 NZ_CP075113.1 Protein Homology CDS 2958633 2959601 . - 0 ID=cds-WP_001574112.1;Parent=gene-CCO47_RS14605;Dbxref=GenBank:WP_001574112.1;Name=WP_001574112.1;gbkey=CDS;gene=sseI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460026.1;locus_tag=CCO47_RS14605;product=SPI-2 type III secretion system effector SseI;protein_id=WP_001574112.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2959860 2960075 . + . ID=gene-CCO47_RS14615;Name=CCO47_RS14615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS14615;old_locus_tag=CCO47_14615;partial=true;pseudo=true;start_range=.,2959860 NZ_CP075113.1 Protein Homology CDS 2959860 2960075 . + 0 ID=cds-CCO47_RS14615;Parent=gene-CCO47_RS14615;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461633.1;locus_tag=CCO47_RS14615;partial=true;product=tail fiber assembly protein;pseudo=true;start_range=.,2959860;transl_table=11 NZ_CP075113.1 RefSeq gene 2960079 2960660 . - . ID=gene-CCO47_RS14620;Name=CCO47_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14620;old_locus_tag=CCO47_14620 NZ_CP075113.1 Protein Homology CDS 2960079 2960660 . - 0 ID=cds-WP_000143167.1;Parent=gene-CCO47_RS14620;Dbxref=GenBank:WP_000143167.1;Name=WP_000143167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460025.1;locus_tag=CCO47_RS14620;product=tail fiber assembly protein;protein_id=WP_000143167.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2960660 2961532 . - . ID=gene-CCO47_RS24200;Name=CCO47_RS24200;end_range=2961532,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24200;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 2960660 2961532 . - 0 ID=cds-CCO47_RS24200;Parent=gene-CCO47_RS24200;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2961532,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461524.1;locus_tag=CCO47_RS24200;partial=true;product=phage tail protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2962366 2962992 . - . ID=gene-CCO47_RS14630;Name=CCO47_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14630;old_locus_tag=CCO47_14630 NZ_CP075113.1 Protein Homology CDS 2962366 2962992 . - 0 ID=cds-WP_000729406.1;Parent=gene-CCO47_RS14630;Dbxref=GenBank:WP_000729406.1;Name=WP_000729406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729407.1;locus_tag=CCO47_RS14630;product=hypothetical protein;protein_id=WP_000729406.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2962976 2964202 . - . ID=gene-CCO47_RS14635;Name=CCO47_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14635;old_locus_tag=CCO47_14635 NZ_CP075113.1 Protein Homology CDS 2962976 2964202 . - 0 ID=cds-WP_001281709.1;Parent=gene-CCO47_RS14635;Dbxref=GenBank:WP_001281709.1;Name=WP_001281709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001281708.1;locus_tag=CCO47_RS14635;product=baseplate J/gp47 family protein;protein_id=WP_001281709.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2964199 2964531 . - . ID=gene-CCO47_RS14640;Name=CCO47_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14640;old_locus_tag=CCO47_14640 NZ_CP075113.1 Protein Homology CDS 2964199 2964531 . - 0 ID=cds-WP_001261467.1;Parent=gene-CCO47_RS14640;Dbxref=GenBank:WP_001261467.1;Name=WP_001261467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001261465.1;locus_tag=CCO47_RS14640;product=hypothetical protein;protein_id=WP_001261467.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2964528 2965244 . - . ID=gene-CCO47_RS14645;Name=CCO47_RS14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14645;old_locus_tag=CCO47_14645 NZ_CP075113.1 Protein Homology CDS 2964528 2965244 . - 0 ID=cds-WP_000055864.1;Parent=gene-CCO47_RS14645;Dbxref=GenBank:WP_000055864.1;Name=WP_000055864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000026344.1;locus_tag=CCO47_RS14645;product=hypothetical protein;protein_id=WP_000055864.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2965241 2966293 . - . ID=gene-CCO47_RS14650;Name=CCO47_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14650;old_locus_tag=CCO47_14650 NZ_CP075113.1 Protein Homology CDS 2965241 2966293 . - 0 ID=cds-WP_001271127.1;Parent=gene-CCO47_RS14650;Dbxref=GenBank:WP_001271127.1;Name=WP_001271127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751782.1;locus_tag=CCO47_RS14650;product=hypothetical protein;protein_id=WP_001271127.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2966293 2966568 . - . ID=gene-CCO47_RS14655;Name=CCO47_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14655;old_locus_tag=CCO47_14655 NZ_CP075113.1 Protein Homology CDS 2966293 2966568 . - 0 ID=cds-WP_000100901.1;Parent=gene-CCO47_RS14655;Dbxref=GenBank:WP_000100901.1;Name=WP_000100901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000100901.1;locus_tag=CCO47_RS14655;product=hypothetical protein;protein_id=WP_000100901.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2966784 2967281 . - . ID=gene-CCO47_RS14660;Name=CCO47_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14660;old_locus_tag=CCO47_14660 NZ_CP075113.1 Protein Homology CDS 2966784 2967281 . - 0 ID=cds-WP_000011140.1;Parent=gene-CCO47_RS14660;Dbxref=GenBank:WP_000011140.1;Name=WP_000011140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000011140.1;locus_tag=CCO47_RS14660;product=hypothetical protein;protein_id=WP_000011140.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2967281 2969335 . - . ID=gene-CCO47_RS14665;Name=CCO47_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14665;old_locus_tag=CCO47_14665 NZ_CP075113.1 Protein Homology CDS 2967281 2969335 . - 0 ID=cds-WP_000729222.1;Parent=gene-CCO47_RS14665;Dbxref=GenBank:WP_000729222.1;Name=WP_000729222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729222.1;locus_tag=CCO47_RS14665;product=hypothetical protein;protein_id=WP_000729222.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2969459 2970046 . - . ID=gene-CCO47_RS14670;Name=CCO47_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14670;old_locus_tag=CCO47_14670 NZ_CP075113.1 Protein Homology CDS 2969459 2970046 . - 0 ID=cds-WP_000268742.1;Parent=gene-CCO47_RS14670;Dbxref=GenBank:WP_000268742.1;Name=WP_000268742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000268742.1;locus_tag=CCO47_RS14670;product=hypothetical protein;protein_id=WP_000268742.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2970046 2970483 . - . ID=gene-CCO47_RS14675;Name=CCO47_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14675;old_locus_tag=CCO47_14675 NZ_CP075113.1 Protein Homology CDS 2970046 2970483 . - 0 ID=cds-WP_001133547.1;Parent=gene-CCO47_RS14675;Dbxref=GenBank:WP_001133547.1;Name=WP_001133547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001133547.1;locus_tag=CCO47_RS14675;product=hypothetical protein;protein_id=WP_001133547.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2970487 2971881 . - . ID=gene-CCO47_RS14680;Name=CCO47_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14680;old_locus_tag=CCO47_14680 NZ_CP075113.1 Protein Homology CDS 2970487 2971881 . - 0 ID=cds-WP_001018952.1;Parent=gene-CCO47_RS14680;Dbxref=GenBank:WP_001018952.1;Name=WP_001018952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835740.1;locus_tag=CCO47_RS14680;product=hypothetical protein;protein_id=WP_001018952.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2971886 2972824 . - . ID=gene-CCO47_RS14685;Name=CCO47_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14685;old_locus_tag=CCO47_14685 NZ_CP075113.1 Protein Homology CDS 2971886 2972824 . - 0 ID=cds-WP_001139602.1;Parent=gene-CCO47_RS14685;Dbxref=GenBank:WP_001139602.1;Name=WP_001139602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001139605.1;locus_tag=CCO47_RS14685;product=hypothetical protein;protein_id=WP_001139602.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2972808 2973239 . - . ID=gene-CCO47_RS14690;Name=CCO47_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14690;old_locus_tag=CCO47_14690 NZ_CP075113.1 Protein Homology CDS 2972808 2973239 . - 0 ID=cds-WP_000766225.1;Parent=gene-CCO47_RS14690;Dbxref=GenBank:WP_000766225.1;Name=WP_000766225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000766224.1;locus_tag=CCO47_RS14690;product=hypothetical protein;protein_id=WP_000766225.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2973236 2973661 . - . ID=gene-CCO47_RS14695;Name=CCO47_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14695;old_locus_tag=CCO47_14695 NZ_CP075113.1 Protein Homology CDS 2973236 2973661 . - 0 ID=cds-WP_001114360.1;Parent=gene-CCO47_RS14695;Dbxref=GenBank:WP_001114360.1;Name=WP_001114360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001114359.1;locus_tag=CCO47_RS14695;product=hypothetical protein;protein_id=WP_001114360.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2973674 2974159 . - . ID=gene-CCO47_RS14700;Name=CCO47_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14700;old_locus_tag=CCO47_14700 NZ_CP075113.1 Protein Homology CDS 2973674 2974159 . - 0 ID=cds-WP_000780866.1;Parent=gene-CCO47_RS14700;Dbxref=GenBank:WP_000780866.1;Name=WP_000780866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000780865.1;locus_tag=CCO47_RS14700;product=hypothetical protein;protein_id=WP_000780866.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2974224 2975255 . - . ID=gene-CCO47_RS14705;Name=CCO47_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14705;old_locus_tag=CCO47_14705 NZ_CP075113.1 Protein Homology CDS 2974224 2975255 . - 0 ID=cds-WP_001110971.1;Parent=gene-CCO47_RS14705;Dbxref=GenBank:WP_001110971.1;Name=WP_001110971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406010.1;locus_tag=CCO47_RS14705;product=major capsid family protein;protein_id=WP_001110971.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2975273 2976145 . - . ID=gene-CCO47_RS14710;Name=CCO47_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14710;old_locus_tag=CCO47_14710 NZ_CP075113.1 Protein Homology CDS 2975273 2976145 . - 0 ID=cds-WP_001574105.1;Parent=gene-CCO47_RS14710;Dbxref=GenBank:WP_001574105.1;Name=WP_001574105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574105.1;locus_tag=CCO47_RS14710;product=hypothetical protein;protein_id=WP_001574105.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2976166 2977740 . - . ID=gene-CCO47_RS14715;Name=CCO47_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14715;old_locus_tag=CCO47_14715 NZ_CP075113.1 Protein Homology CDS 2976166 2977740 . - 0 ID=cds-WP_001099363.1;Parent=gene-CCO47_RS14715;Dbxref=GenBank:WP_001099363.1;Name=WP_001099363.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406012.1;locus_tag=CCO47_RS14715;product=NUDIX hydrolase;protein_id=WP_001099363.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2977741 2978616 . - . ID=gene-CCO47_RS14720;Name=CCO47_RS14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14720;old_locus_tag=CCO47_14720 NZ_CP075113.1 Protein Homology CDS 2977741 2978616 . - 0 ID=cds-WP_001084016.1;Parent=gene-CCO47_RS14720;Dbxref=GenBank:WP_001084016.1;Name=WP_001084016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835735.1;locus_tag=CCO47_RS14720;product=hypothetical protein;protein_id=WP_001084016.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2978588 2980018 . - . ID=gene-CCO47_RS14725;Name=CCO47_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14725;old_locus_tag=CCO47_14725 NZ_CP075113.1 Protein Homology CDS 2978588 2980018 . - 0 ID=cds-WP_001150142.1;Parent=gene-CCO47_RS14725;Dbxref=GenBank:WP_001150142.1;Name=WP_001150142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001150139.1;locus_tag=CCO47_RS14725;product=anti-CBASS protein Acb1 family protein;protein_id=WP_001150142.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2980018 2981289 . - . ID=gene-CCO47_RS14730;Name=CCO47_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14730;old_locus_tag=CCO47_14730 NZ_CP075113.1 Protein Homology CDS 2980018 2981289 . - 0 ID=cds-WP_000179870.1;Parent=gene-CCO47_RS14730;Dbxref=GenBank:WP_000179870.1;Name=WP_000179870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016152532.1;locus_tag=CCO47_RS14730;product=hypothetical protein;protein_id=WP_000179870.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2981279 2982253 . - . ID=gene-CCO47_RS14735;Name=CCO47_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14735;old_locus_tag=CCO47_14735 NZ_CP075113.1 Protein Homology CDS 2981279 2982253 . - 0 ID=cds-WP_001118137.1;Parent=gene-CCO47_RS14735;Dbxref=GenBank:WP_001118137.1;Name=WP_001118137.1;Ontology_term=GO:0051276,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=chromosome organization|0051276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118139.1;locus_tag=CCO47_RS14735;product=terminase small subunit;protein_id=WP_001118137.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2982315 2982728 . - . ID=gene-CCO47_RS14740;Name=CCO47_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14740;old_locus_tag=CCO47_14740 NZ_CP075113.1 Protein Homology CDS 2982315 2982728 . - 0 ID=cds-WP_000403520.1;Parent=gene-CCO47_RS14740;Dbxref=GenBank:WP_000403520.1;Name=WP_000403520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403520.1;locus_tag=CCO47_RS14740;product=hypothetical protein;protein_id=WP_000403520.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2982718 2983269 . - . ID=gene-CCO47_RS14745;Name=CCO47_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14745;old_locus_tag=CCO47_14745 NZ_CP075113.1 Protein Homology CDS 2982718 2983269 . - 0 ID=cds-WP_001050813.1;Parent=gene-CCO47_RS14745;Dbxref=GenBank:WP_001050813.1;Name=WP_001050813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050813.1;locus_tag=CCO47_RS14745;product=DUF2514 family protein;protein_id=WP_001050813.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2983266 2983880 . - . ID=gene-CCO47_RS14750;Name=CCO47_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14750;old_locus_tag=CCO47_14750 NZ_CP075113.1 Protein Homology CDS 2983266 2983880 . - 0 ID=cds-WP_001005899.1;Parent=gene-CCO47_RS14750;Dbxref=GenBank:WP_001005899.1;Name=WP_001005899.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459884.1;locus_tag=CCO47_RS14750;product=glycoside hydrolase family 19 protein;protein_id=WP_001005899.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2983883 2984224 . - . ID=gene-CCO47_RS14755;Name=CCO47_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14755;old_locus_tag=CCO47_14755 NZ_CP075113.1 Protein Homology CDS 2983883 2984224 . - 0 ID=cds-WP_162096904.1;Parent=gene-CCO47_RS14755;Dbxref=GenBank:WP_162096904.1;Name=WP_162096904.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000781787.1;locus_tag=CCO47_RS14755;product=phage holin%2C lambda family;protein_id=WP_162096904.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2984629 2985426 . - . ID=gene-CCO47_RS14760;Name=CCO47_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14760;old_locus_tag=CCO47_14760 NZ_CP075113.1 Protein Homology CDS 2984629 2985426 . - 0 ID=cds-WP_001047633.1;Parent=gene-CCO47_RS14760;Dbxref=GenBank:WP_001047633.1;Name=WP_001047633.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459997.1;locus_tag=CCO47_RS14760;product=antitermination protein Q;protein_id=WP_001047633.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2985416 2985562 . - . ID=gene-CCO47_RS14765;Name=CCO47_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14765;old_locus_tag=CCO47_14765 NZ_CP075113.1 Protein Homology CDS 2985416 2985562 . - 0 ID=cds-WP_001617856.1;Parent=gene-CCO47_RS14765;Dbxref=GenBank:WP_001617856.1;Name=WP_001617856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001648706.1;locus_tag=CCO47_RS14765;product=YlcG family protein;protein_id=WP_001617856.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2985559 2986083 . - . ID=gene-CCO47_RS14770;Name=CCO47_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14770;old_locus_tag=CCO47_14770 NZ_CP075113.1 Protein Homology CDS 2985559 2986083 . - 0 ID=cds-WP_094912337.1;Parent=gene-CCO47_RS14770;Dbxref=GenBank:WP_094912337.1;Name=WP_094912337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459996.1;locus_tag=CCO47_RS14770;product=recombination protein NinG;protein_id=WP_094912337.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2986086 2986292 . - . ID=gene-CCO47_RS24205;Name=CCO47_RS24205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24205 NZ_CP075113.1 Protein Homology CDS 2986086 2986292 . - 0 ID=cds-WP_001241019.1;Parent=gene-CCO47_RS24205;Dbxref=GenBank:WP_001241019.1;Name=WP_001241019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528771.1;locus_tag=CCO47_RS24205;product=hypothetical protein;protein_id=WP_001241019.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2986292 2986894 . - . ID=gene-CCO47_RS14775;Name=CCO47_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14775;old_locus_tag=CCO47_14775 NZ_CP075113.1 Protein Homology CDS 2986292 2986894 . - 0 ID=cds-WP_000929791.1;Parent=gene-CCO47_RS14775;Dbxref=GenBank:WP_000929791.1;Name=WP_000929791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461555.1;locus_tag=CCO47_RS14775;product=DUF1367 family protein;protein_id=WP_000929791.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2987229 2987468 . - . ID=gene-CCO47_RS14780;Name=CCO47_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14780;old_locus_tag=CCO47_14780 NZ_CP075113.1 Protein Homology CDS 2987229 2987468 . - 0 ID=cds-WP_001217670.1;Parent=gene-CCO47_RS14780;Dbxref=GenBank:WP_001217670.1;Name=WP_001217670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001217670.1;locus_tag=CCO47_RS14780;product=DinI family protein;protein_id=WP_001217670.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2987984 2988556 . - . ID=gene-CCO47_RS14785;Name=CCO47_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14785;old_locus_tag=CCO47_14785 NZ_CP075113.1 Protein Homology CDS 2987984 2988556 . - 0 ID=cds-WP_000208074.1;Parent=gene-CCO47_RS14785;Dbxref=GenBank:WP_000208074.1;Name=WP_000208074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751779.1;locus_tag=CCO47_RS14785;product=DUF550 domain-containing protein;protein_id=WP_000208074.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2988560 2989033 . - . ID=gene-CCO47_RS14790;Name=CCO47_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14790;old_locus_tag=CCO47_14790 NZ_CP075113.1 Protein Homology CDS 2988560 2989033 . - 0 ID=cds-WP_000445793.1;Parent=gene-CCO47_RS14790;Dbxref=GenBank:WP_000445793.1;Name=WP_000445793.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000840609.1;locus_tag=CCO47_RS14790;product=class I SAM-dependent methyltransferase;protein_id=WP_000445793.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2989033 2989557 . - . ID=gene-CCO47_RS14795;Name=CCO47_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14795;old_locus_tag=CCO47_14795 NZ_CP075113.1 Protein Homology CDS 2989033 2989557 . - 0 ID=cds-WP_000065105.1;Parent=gene-CCO47_RS14795;Dbxref=GenBank:WP_000065105.1;Name=WP_000065105.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025303.7;locus_tag=CCO47_RS14795;product=ead/Ea22-like family protein;protein_id=WP_000065105.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2989554 2989901 . - . ID=gene-CCO47_RS14800;Name=CCO47_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14800;old_locus_tag=CCO47_14800 NZ_CP075113.1 Protein Homology CDS 2989554 2989901 . - 0 ID=cds-WP_000113623.1;Parent=gene-CCO47_RS14800;Dbxref=GenBank:WP_000113623.1;Name=WP_000113623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459991.1;locus_tag=CCO47_RS14800;product=DUF977 family protein;protein_id=WP_000113623.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2989912 2990661 . - . ID=gene-CCO47_RS14805;Name=CCO47_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14805;old_locus_tag=CCO47_14805 NZ_CP075113.1 Protein Homology CDS 2989912 2990661 . - 0 ID=cds-WP_000800010.1;Parent=gene-CCO47_RS14805;Dbxref=GenBank:WP_000800010.1;Name=WP_000800010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459990.1;locus_tag=CCO47_RS14805;product=ATP-binding protein;protein_id=WP_000800010.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2990664 2991647 . - . ID=gene-CCO47_RS14810;Name=CCO47_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14810;old_locus_tag=CCO47_14810 NZ_CP075113.1 Protein Homology CDS 2990664 2991647 . - 0 ID=cds-WP_000062941.1;Parent=gene-CCO47_RS14810;Dbxref=GenBank:WP_000062941.1;Name=WP_000062941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459989.1;locus_tag=CCO47_RS14810;product=replication protein;protein_id=WP_000062941.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2991732 2992106 . - . ID=gene-CCO47_RS14815;Name=CCO47_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14815;old_locus_tag=CCO47_14815 NZ_CP075113.1 Protein Homology CDS 2991732 2992106 . - 0 ID=cds-WP_001574095.1;Parent=gene-CCO47_RS14815;Dbxref=GenBank:WP_001574095.1;Name=WP_001574095.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459988.1;locus_tag=CCO47_RS14815;product=CII family transcriptional regulator;protein_id=WP_001574095.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2992072 2992308 . - . ID=gene-CCO47_RS14820;Name=CCO47_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14820;old_locus_tag=CCO47_14820 NZ_CP075113.1 Protein Homology CDS 2992072 2992308 . - 0 ID=cds-WP_000869364.1;Parent=gene-CCO47_RS14820;Dbxref=GenBank:WP_000869364.1;Name=WP_000869364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000869364.1;locus_tag=CCO47_RS14820;product=transcriptional regulator;protein_id=WP_000869364.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2992438 2992842 . + . ID=gene-CCO47_RS14825;Name=CCO47_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14825;old_locus_tag=CCO47_14825 NZ_CP075113.1 Protein Homology CDS 2992438 2992842 . + 0 ID=cds-WP_001009036.1;Parent=gene-CCO47_RS14825;Dbxref=GenBank:WP_001009036.1;Name=WP_001009036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001009036.1;locus_tag=CCO47_RS14825;product=transcriptional regulator;protein_id=WP_001009036.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2993093 2993248 . + . ID=gene-CCO47_RS24210;Name=CCO47_RS24210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24210;partial=true;pseudo=true;start_range=.,2993093 NZ_CP075113.1 Protein Homology CDS 2993093 2993248 . + 0 ID=cds-CCO47_RS24210;Parent=gene-CCO47_RS24210;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461564.1;locus_tag=CCO47_RS24210;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2993093;transl_table=11 NZ_CP075113.1 RefSeq gene 2993241 2993411 . + . ID=gene-CCO47_RS14830;Name=CCO47_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14830;old_locus_tag=CCO47_14830 NZ_CP075113.1 Protein Homology CDS 2993241 2993411 . + 0 ID=cds-WP_000917690.1;Parent=gene-CCO47_RS14830;Dbxref=GenBank:WP_000917690.1;Name=WP_000917690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000917690.1;locus_tag=CCO47_RS14830;product=YdaE family protein;protein_id=WP_000917690.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2993552 2996740 . + . ID=gene-CCO47_RS14835;Name=CCO47_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14835;old_locus_tag=CCO47_14835 NZ_CP075113.1 Protein Homology CDS 2993552 2996740 . + 0 ID=cds-WP_000394220.1;Parent=gene-CCO47_RS14835;Dbxref=GenBank:WP_000394220.1;Name=WP_000394220.1;Ontology_term=GO:0090304,GO:0051908;gbkey=CDS;go_function=double-stranded DNA 5'-3' DNA exonuclease activity|0051908||IEA;go_process=nucleic acid metabolic process|0090304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000394220.1;locus_tag=CCO47_RS14835;product=RecE family exodeoxyribonuclease;protein_id=WP_000394220.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 2996703 2997862 . + . ID=gene-CCO47_RS14840;Name=CCO47_RS14840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS14840;old_locus_tag=CCO47_14840;pseudo=true NZ_CP075113.1 Protein Homology CDS 2996703 2997862 . + 0 ID=cds-CCO47_RS14840;Parent=gene-CCO47_RS14840;Note=frameshifted;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459983.3;locus_tag=CCO47_RS14840;product=RecT family recombinase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 2997905 2998144 . + . ID=gene-CCO47_RS14845;Name=CCO47_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14845;old_locus_tag=CCO47_14845 NZ_CP075113.1 Protein Homology CDS 2997905 2998144 . + 0 ID=cds-WP_001237031.1;Parent=gene-CCO47_RS14845;Dbxref=GenBank:WP_001237031.1;Name=WP_001237031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459982.1;locus_tag=CCO47_RS14845;product=DUF4060 family protein;protein_id=WP_001237031.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2998185 2998433 . + . ID=gene-CCO47_RS14850;Name=xis;gbkey=Gene;gene=xis;gene_biotype=protein_coding;locus_tag=CCO47_RS14850;old_locus_tag=CCO47_14850 NZ_CP075113.1 Protein Homology CDS 2998185 2998433 . + 0 ID=cds-WP_000065276.1;Parent=gene-CCO47_RS14850;Dbxref=GenBank:WP_000065276.1;Name=WP_000065276.1;gbkey=CDS;gene=xis;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459981.1;locus_tag=CCO47_RS14850;product=excisionase Xis;protein_id=WP_000065276.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2998478 2999770 . + . ID=gene-CCO47_RS14855;Name=int;gbkey=Gene;gene=int;gene_biotype=protein_coding;locus_tag=CCO47_RS14855;old_locus_tag=CCO47_14855 NZ_CP075113.1 Protein Homology CDS 2998478 2999770 . + 0 ID=cds-WP_001262311.1;Parent=gene-CCO47_RS14855;Dbxref=GenBank:WP_001262311.1;Name=WP_001262311.1;gbkey=CDS;gene=int;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459980.1;locus_tag=CCO47_RS14855;product=FimB-specific integrase Int;protein_id=WP_001262311.1;transl_table=11 NZ_CP075113.1 RefSeq gene 2999965 3001167 . + . ID=gene-CCO47_RS14860;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=CCO47_RS14860;old_locus_tag=CCO47_14860 NZ_CP075113.1 Protein Homology CDS 2999965 3001167 . + 0 ID=cds-WP_000191404.1;Parent=gene-CCO47_RS14860;Dbxref=GenBank:WP_000191404.1;Name=WP_000191404.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459979.1;locus_tag=CCO47_RS14860;product=nicotinate phosphoribosyltransferase;protein_id=WP_000191404.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3001245 3002681 . - . ID=gene-CCO47_RS14865;Name=CCO47_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14865;old_locus_tag=CCO47_14865 NZ_CP075113.1 Protein Homology CDS 3001245 3002681 . - 0 ID=cds-WP_000893202.1;Parent=gene-CCO47_RS14865;Dbxref=GenBank:WP_000893202.1;Name=WP_000893202.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459978.1;locus_tag=CCO47_RS14865;product=alanine/glycine:cation symporter family protein;protein_id=WP_000893202.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3002927 3004141 . - . ID=gene-CCO47_RS14870;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=CCO47_RS14870;old_locus_tag=CCO47_14870 NZ_CP075113.1 Protein Homology CDS 3002927 3004141 . - 0 ID=cds-WP_000544855.1;Parent=gene-CCO47_RS14870;Dbxref=GenBank:WP_000544855.1;Name=WP_000544855.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459977.1;locus_tag=CCO47_RS14870;product=diaminopropionate ammonia-lyase;protein_id=WP_000544855.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3004459 3004920 . + . ID=gene-CCO47_RS14875;Name=CCO47_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14875;old_locus_tag=CCO47_14875 NZ_CP075113.1 Protein Homology CDS 3004459 3004920 . + 0 ID=cds-WP_000762342.1;Parent=gene-CCO47_RS14875;Dbxref=GenBank:WP_000762342.1;Name=WP_000762342.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459976.1;locus_tag=CCO47_RS14875;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_000762342.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3005121 3006521 . + . ID=gene-CCO47_RS14880;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=CCO47_RS14880;old_locus_tag=CCO47_14880 NZ_CP075113.1 Protein Homology CDS 3005121 3006521 . + 0 ID=cds-WP_000117867.1;Parent=gene-CCO47_RS14880;Dbxref=GenBank:WP_000117867.1;Name=WP_000117867.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=CCO47_RS14880;product=asparagine--tRNA ligase;protein_id=WP_000117867.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3007115 3008206 . + . ID=gene-CCO47_RS14885;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=CCO47_RS14885;old_locus_tag=CCO47_14885 NZ_CP075113.1 Protein Homology CDS 3007115 3008206 . + 0 ID=cds-WP_000977709.1;Parent=gene-CCO47_RS14885;Dbxref=GenBank:WP_000977709.1;Name=WP_000977709.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459974.1;locus_tag=CCO47_RS14885;product=porin OmpF;protein_id=WP_000977709.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3008391 3009581 . + . ID=gene-CCO47_RS14890;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=CCO47_RS14890;old_locus_tag=CCO47_14890 NZ_CP075113.1 Protein Homology CDS 3008391 3009581 . + 0 ID=cds-WP_000462653.1;Parent=gene-CCO47_RS14890;Dbxref=GenBank:WP_000462653.1;Name=WP_000462653.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=CCO47_RS14890;product=aspartate transaminase;protein_id=WP_000462653.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3009643 3010290 . - . ID=gene-CCO47_RS14895;Name=CCO47_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14895;old_locus_tag=CCO47_14895 NZ_CP075113.1 Protein Homology CDS 3009643 3010290 . - 0 ID=cds-WP_001109471.1;Parent=gene-CCO47_RS14895;Dbxref=GenBank:WP_001109471.1;Name=WP_001109471.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=CCO47_RS14895;product=MBL fold metallo-hydrolase;protein_id=WP_001109471.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3010318 3010866 . - . ID=gene-CCO47_RS14900;Name=mepK;gbkey=Gene;gene=mepK;gene_biotype=protein_coding;locus_tag=CCO47_RS14900;old_locus_tag=CCO47_14900 NZ_CP075113.1 Protein Homology CDS 3010318 3010866 . - 0 ID=cds-WP_000357052.1;Parent=gene-CCO47_RS14900;Dbxref=GenBank:WP_000357052.1;Name=WP_000357052.1;Ontology_term=GO:0006508,GO:0009254,GO:0071555,GO:0004175,GO:0008237,GO:0046872;gbkey=CDS;gene=mepK;go_function=endopeptidase activity|0004175||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA,peptidoglycan turnover|0009254||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=CCO47_RS14900;product=peptidoglycan L%2CD-endopeptidase MepK;protein_id=WP_000357052.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3011126 3012976 . - . ID=gene-CCO47_RS14905;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=CCO47_RS14905;old_locus_tag=CCO47_14905 NZ_CP075113.1 Protein Homology CDS 3011126 3012976 . - 0 ID=cds-WP_000925867.1;Parent=gene-CCO47_RS14905;Dbxref=GenBank:WP_000925867.1;Name=WP_000925867.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=CCO47_RS14905;product=L%2CD-transpeptidase;protein_id=WP_000925867.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3013321 3017775 . - . ID=gene-CCO47_RS14910;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=CCO47_RS14910;old_locus_tag=CCO47_14910 NZ_CP075113.1 Protein Homology CDS 3013321 3017775 . - 0 ID=cds-WP_000572757.1;Parent=gene-CCO47_RS14910;Dbxref=GenBank:WP_000572757.1;Name=WP_000572757.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=CCO47_RS14910;product=chromosome partition protein MukB;protein_id=WP_000572757.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3017775 3018479 . - . ID=gene-CCO47_RS14915;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=CCO47_RS14915;old_locus_tag=CCO47_14915 NZ_CP075113.1 Protein Homology CDS 3017775 3018479 . - 0 ID=cds-WP_000060025.1;Parent=gene-CCO47_RS14915;Dbxref=GenBank:WP_000060025.1;Name=WP_000060025.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=CCO47_RS14915;product=chromosome partition protein MukE;protein_id=WP_000060025.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3018460 3019782 . - . ID=gene-CCO47_RS14920;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=CCO47_RS14920;old_locus_tag=CCO47_14920 NZ_CP075113.1 Protein Homology CDS 3018460 3019782 . - 0 ID=cds-WP_001288828.1;Parent=gene-CCO47_RS14920;Dbxref=GenBank:WP_001288828.1;Name=WP_001288828.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=CCO47_RS14920;product=chromosome partition protein MukF;protein_id=WP_001288828.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3019775 3020578 . - . ID=gene-CCO47_RS14925;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=CCO47_RS14925;old_locus_tag=CCO47_14925 NZ_CP075113.1 Protein Homology CDS 3019775 3020578 . - 0 ID=cds-WP_001154025.1;Parent=gene-CCO47_RS14925;Dbxref=GenBank:WP_001154025.1;Name=WP_001154025.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459966.1;locus_tag=CCO47_RS14925;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_001154025.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3020714 3021490 . + . ID=gene-CCO47_RS14930;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=CCO47_RS14930;old_locus_tag=CCO47_14930 NZ_CP075113.1 Protein Homology CDS 3020714 3021490 . + 0 ID=cds-WP_000899553.1;Parent=gene-CCO47_RS14930;Dbxref=GenBank:WP_000899553.1;Name=WP_000899553.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459965.1;locus_tag=CCO47_RS14930;product=envelope biogenesis factor ElyC;protein_id=WP_000899553.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3021470 3022363 . - . ID=gene-CCO47_RS14935;Name=CCO47_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14935;old_locus_tag=CCO47_14935 NZ_CP075113.1 Protein Homology CDS 3021470 3022363 . - 0 ID=cds-WP_000436889.1;Parent=gene-CCO47_RS14935;Dbxref=GenBank:WP_000436889.1;Name=WP_000436889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459964.1;locus_tag=CCO47_RS14935;product=YcbJ family phosphotransferase;protein_id=WP_000436889.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3022574 3023320 . - . ID=gene-CCO47_RS14940;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=CCO47_RS14940;old_locus_tag=CCO47_14940 NZ_CP075113.1 Protein Homology CDS 3022574 3023320 . - 0 ID=cds-WP_000011585.1;Parent=gene-CCO47_RS14940;Dbxref=GenBank:WP_000011585.1;Name=WP_000011585.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459963.1;locus_tag=CCO47_RS14940;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_000011585.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3023317 3023499 . - . ID=gene-CCO47_RS14945;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=CCO47_RS14945;old_locus_tag=CCO47_14945 NZ_CP075113.1 Protein Homology CDS 3023317 3023499 . - 0 ID=cds-WP_000350061.1;Parent=gene-CCO47_RS14945;Dbxref=GenBank:WP_000350061.1;Name=WP_000350061.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459962.1;locus_tag=CCO47_RS14945;product=protein YcaR;protein_id=WP_000350061.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3023551 3024783 . - . ID=gene-CCO47_RS14950;Name=CCO47_RS14950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS14950;old_locus_tag=CCO47_14950;pseudo=true NZ_CP075113.1 Protein Homology CDS 3023551 3024783 . - 0 ID=cds-CCO47_RS14950;Parent=gene-CCO47_RS14950;Note=internal stop;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=CCO47_RS14950;product=winged helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3024827 3025804 . - . ID=gene-CCO47_RS14955;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=CCO47_RS14955;old_locus_tag=CCO47_14955 NZ_CP075113.1 Protein Homology CDS 3024827 3025804 . - 0 ID=cds-WP_000561699.1;Parent=gene-CCO47_RS14955;Dbxref=GenBank:WP_000561699.1;Name=WP_000561699.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=lipid-A 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459960.1;locus_tag=CCO47_RS14955;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_000561699.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3025801 3027549 . - . ID=gene-CCO47_RS14960;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=CCO47_RS14960;old_locus_tag=CCO47_14960 NZ_CP075113.1 Protein Homology CDS 3025801 3027549 . - 0 ID=cds-WP_000551246.1;Parent=gene-CCO47_RS14960;Dbxref=GenBank:WP_000551246.1;Name=WP_000551246.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459959.1;locus_tag=CCO47_RS14960;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551246.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3027586 3029850 . - . ID=gene-CCO47_RS14965;Name=CCO47_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS14965;old_locus_tag=CCO47_14965 NZ_CP075113.1 Protein Homology CDS 3027586 3029850 . - 0 ID=cds-WP_000705770.1;Parent=gene-CCO47_RS14965;Dbxref=GenBank:WP_000705770.1;Name=WP_000705770.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459958.1;locus_tag=CCO47_RS14965;product=ComEC family protein;protein_id=WP_000705770.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3030080 3030364 . - . ID=gene-CCO47_RS14970;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=CCO47_RS14970;old_locus_tag=CCO47_14970 NZ_CP075113.1 Protein Homology CDS 3030080 3030364 . - 0 ID=cds-WP_000167332.1;Parent=gene-CCO47_RS14970;Dbxref=GenBank:WP_000167332.1;Name=WP_000167332.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=CCO47_RS14970;product=integration host factor subunit beta;protein_id=WP_000167332.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3030520 3032193 . - . ID=gene-CCO47_RS14975;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=CCO47_RS14975;old_locus_tag=CCO47_14975 NZ_CP075113.1 Protein Homology CDS 3030520 3032193 . - 0 ID=cds-WP_000140324.1;Parent=gene-CCO47_RS14975;Dbxref=GenBank:WP_000140324.1;Name=WP_000140324.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=CCO47_RS14975;product=30S ribosomal protein S1;protein_id=WP_000140324.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3032307 3032990 . - . ID=gene-CCO47_RS14980;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=CCO47_RS14980;old_locus_tag=CCO47_14980 NZ_CP075113.1 Protein Homology CDS 3032307 3032990 . - 0 ID=cds-WP_000125007.1;Parent=gene-CCO47_RS14980;Dbxref=GenBank:WP_000125007.1;Name=WP_000125007.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=CCO47_RS14980;product=(d)CMP kinase;protein_id=WP_000125007.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3033163 3033924 . - . ID=gene-CCO47_RS14985;Name=loiP;gbkey=Gene;gene=loiP;gene_biotype=protein_coding;locus_tag=CCO47_RS14985;old_locus_tag=CCO47_14985 NZ_CP075113.1 Protein Homology CDS 3033163 3033924 . - 0 ID=cds-WP_000792301.1;Parent=gene-CCO47_RS14985;Dbxref=GenBank:WP_000792301.1;Name=WP_000792301.1;Ontology_term=GO:0004222;gbkey=CDS;gene=loiP;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459954.1;locus_tag=CCO47_RS14985;product=metalloprotease LoiP;protein_id=WP_000792301.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3034067 3035350 . - . ID=gene-CCO47_RS14990;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=CCO47_RS14990;old_locus_tag=CCO47_14990 NZ_CP075113.1 Protein Homology CDS 3034067 3035350 . - 0 ID=cds-WP_000445198.1;Parent=gene-CCO47_RS14990;Dbxref=GenBank:WP_000445198.1;Name=WP_000445198.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=CCO47_RS14990;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_000445198.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3035421 3036509 . - . ID=gene-CCO47_RS14995;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=CCO47_RS14995;old_locus_tag=CCO47_14995 NZ_CP075113.1 Protein Homology CDS 3035421 3036509 . - 0 ID=cds-WP_000079590.1;Parent=gene-CCO47_RS14995;Dbxref=GenBank:WP_000079590.1;Name=WP_000079590.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459952.1;locus_tag=CCO47_RS14995;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_000079590.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3036695 3037387 . - . ID=gene-CCO47_RS15000;Name=CCO47_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15000;old_locus_tag=CCO47_15000 NZ_CP075113.1 Protein Homology CDS 3036695 3037387 . - 0 ID=cds-WP_000642867.1;Parent=gene-CCO47_RS15000;Dbxref=GenBank:WP_000642867.1;Name=WP_000642867.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459951.1;locus_tag=CCO47_RS15000;product=DUF421 domain-containing protein;protein_id=WP_000642867.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3037524 3039284 . + . ID=gene-CCO47_RS15005;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=CCO47_RS15005;old_locus_tag=CCO47_15005 NZ_CP075113.1 Protein Homology CDS 3037524 3039284 . + 0 ID=cds-WP_000194823.1;Parent=gene-CCO47_RS15005;Dbxref=GenBank:WP_000194823.1;Name=WP_000194823.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=CCO47_RS15005;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_000194823.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3039690 3040547 . + . ID=gene-CCO47_RS15010;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=CCO47_RS15010;old_locus_tag=CCO47_15010 NZ_CP075113.1 Protein Homology CDS 3039690 3040547 . + 0 ID=cds-WP_000642538.1;Parent=gene-CCO47_RS15010;Dbxref=GenBank:WP_000642538.1;Name=WP_000642538.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459949.1;locus_tag=CCO47_RS15010;product=formate transporter FocA;protein_id=WP_000642538.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3040607 3042889 . + . ID=gene-CCO47_RS15015;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=CCO47_RS15015;old_locus_tag=CCO47_15015 NZ_CP075113.1 Protein Homology CDS 3040607 3042889 . + 0 ID=cds-WP_001292799.1;Parent=gene-CCO47_RS15015;Dbxref=GenBank:WP_001292799.1;Name=WP_001292799.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=CCO47_RS15015;product=formate C-acetyltransferase;protein_id=WP_001292799.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3042965 3043924 . - . ID=gene-CCO47_RS15020;Name=sopD2;gbkey=Gene;gene=sopD2;gene_biotype=protein_coding;locus_tag=CCO47_RS15020;old_locus_tag=CCO47_15020 NZ_CP075113.1 Protein Homology CDS 3042965 3043924 . - 0 ID=cds-WP_094912334.1;Parent=gene-CCO47_RS15020;Dbxref=GenBank:WP_094912334.1;Name=WP_094912334.1;gbkey=CDS;gene=sopD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459947.1;locus_tag=CCO47_RS15020;product=SPI-2 type III secretion system effector SopD2;protein_id=WP_094912334.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3044055 3044381 . + . ID=gene-CCO47_RS15025;Name=CCO47_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15025;old_locus_tag=CCO47_15025 NZ_CP075113.1 Protein Homology CDS 3044055 3044381 . + 0 ID=cds-WP_012543336.1;Parent=gene-CCO47_RS15025;Dbxref=GenBank:WP_012543336.1;Name=WP_012543336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459946.1;locus_tag=CCO47_RS15025;product=hypothetical protein;protein_id=WP_012543336.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3044500 3045297 . + . ID=gene-CCO47_RS15030;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=CCO47_RS15030;old_locus_tag=CCO47_15030 NZ_CP075113.1 Protein Homology CDS 3044500 3045297 . + 0 ID=cds-WP_000067973.1;Parent=gene-CCO47_RS15030;Dbxref=GenBank:WP_000067973.1;Name=WP_000067973.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696619.1;locus_tag=CCO47_RS15030;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000067973.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3045590 3047011 . - . ID=gene-CCO47_RS15035;Name=CCO47_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15035;old_locus_tag=CCO47_15035 NZ_CP075113.1 Protein Homology CDS 3045590 3047011 . - 0 ID=cds-WP_001134268.1;Parent=gene-CCO47_RS15035;Dbxref=GenBank:WP_001134268.1;Name=WP_001134268.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459944.1;locus_tag=CCO47_RS15035;product=APC family permease;protein_id=WP_001134268.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3047229 3048377 . - . ID=gene-CCO47_RS15040;Name=CCO47_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15040;old_locus_tag=CCO47_15040 NZ_CP075113.1 Protein Homology CDS 3047229 3048377 . - 0 ID=cds-WP_000109266.1;Parent=gene-CCO47_RS15040;Dbxref=GenBank:WP_000109266.1;Name=WP_000109266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=CCO47_RS15040;product=MFS transporter;protein_id=WP_000109266.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3048727 3049590 . - . ID=gene-CCO47_RS15045;Name=CCO47_RS15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15045;old_locus_tag=CCO47_15045 NZ_CP075113.1 Protein Homology CDS 3048727 3049590 . - 0 ID=cds-WP_000534676.1;Parent=gene-CCO47_RS15045;Dbxref=GenBank:WP_000534676.1;Name=WP_000534676.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459942.1;locus_tag=CCO47_RS15045;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000534676.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3049592 3050209 . - . ID=gene-CCO47_RS15050;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=CCO47_RS15050;old_locus_tag=CCO47_15050 NZ_CP075113.1 Protein Homology CDS 3049592 3050209 . - 0 ID=cds-WP_000213069.1;Parent=gene-CCO47_RS15050;Dbxref=GenBank:WP_000213069.1;Name=WP_000213069.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=CCO47_RS15050;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213069.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3050220 3052664 . - . ID=gene-CCO47_RS15055;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=CCO47_RS15055;old_locus_tag=CCO47_15055 NZ_CP075113.1 Protein Homology CDS 3050220 3052664 . - 0 ID=cds-WP_000850262.1;Parent=gene-CCO47_RS15055;Dbxref=GenBank:WP_000850262.1;Name=WP_000850262.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=CCO47_RS15055;product=dimethylsulfoxide reductase subunit A;protein_id=WP_000850262.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3052901 3054193 . - . ID=gene-CCO47_RS15060;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=CCO47_RS15060;old_locus_tag=CCO47_15060 NZ_CP075113.1 Protein Homology CDS 3052901 3054193 . - 0 ID=cds-WP_000886697.1;Parent=gene-CCO47_RS15060;Dbxref=GenBank:WP_000886697.1;Name=WP_000886697.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=CCO47_RS15060;product=serine--tRNA ligase;protein_id=WP_000886697.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3054452 3055795 . - . ID=gene-CCO47_RS15065;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=CCO47_RS15065;old_locus_tag=CCO47_15065 NZ_CP075113.1 Protein Homology CDS 3054452 3055795 . - 0 ID=cds-WP_000067792.1;Parent=gene-CCO47_RS15065;Dbxref=GenBank:WP_000067792.1;Name=WP_000067792.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123573.1;locus_tag=CCO47_RS15065;product=replication-associated recombination protein RarA;protein_id=WP_000067792.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3055805 3056416 . - . ID=gene-CCO47_RS15070;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=CCO47_RS15070;old_locus_tag=CCO47_15070 NZ_CP075113.1 Protein Homology CDS 3055805 3056416 . - 0 ID=cds-WP_001519746.1;Parent=gene-CCO47_RS15070;Dbxref=GenBank:WP_001519746.1;Name=WP_001519746.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=CCO47_RS15070;product=outer membrane lipoprotein periplasmic chaperone LolA;protein_id=WP_001519746.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3056559 3060485 . - . ID=gene-CCO47_RS15075;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=CCO47_RS15075;old_locus_tag=CCO47_15075 NZ_CP075113.1 Protein Homology CDS 3056559 3060485 . - 0 ID=cds-WP_080200829.1;Parent=gene-CCO47_RS15075;Dbxref=GenBank:WP_080200829.1;Name=WP_080200829.1;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=CCO47_RS15075;product=DNA translocase FtsK;protein_id=WP_080200829.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3060620 3061114 . - . ID=gene-CCO47_RS15080;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=CCO47_RS15080;old_locus_tag=CCO47_15080 NZ_CP075113.1 Protein Homology CDS 3060620 3061114 . - 0 ID=cds-WP_000228469.1;Parent=gene-CCO47_RS15080;Dbxref=GenBank:WP_000228469.1;Name=WP_000228469.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=CCO47_RS15080;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228469.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3061660 3062628 . + . ID=gene-CCO47_RS15085;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=CCO47_RS15085;old_locus_tag=CCO47_15085 NZ_CP075113.1 Protein Homology CDS 3061660 3062628 . + 0 ID=cds-WP_000537407.1;Parent=gene-CCO47_RS15085;Dbxref=GenBank:WP_000537407.1;Name=WP_000537407.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459934.1;locus_tag=CCO47_RS15085;product=thioredoxin-disulfide reductase;protein_id=WP_000537407.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3062742 3064508 . + . ID=gene-CCO47_RS15090;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=CCO47_RS15090;old_locus_tag=CCO47_15090 NZ_CP075113.1 Protein Homology CDS 3062742 3064508 . + 0 ID=cds-WP_001044549.1;Parent=gene-CCO47_RS15090;Dbxref=GenBank:WP_001044549.1;Name=WP_001044549.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=CCO47_RS15090;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_001044549.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3064509 3066230 . + . ID=gene-CCO47_RS15095;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=CCO47_RS15095;old_locus_tag=CCO47_15095 NZ_CP075113.1 Protein Homology CDS 3064509 3066230 . + 0 ID=cds-WP_001202268.1;Parent=gene-CCO47_RS15095;Dbxref=GenBank:WP_001202268.1;Name=WP_001202268.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=CCO47_RS15095;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_001202268.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3066275 3066979 . + . ID=gene-CCO47_RS15100;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=CCO47_RS15100;old_locus_tag=CCO47_15100 NZ_CP075113.1 Protein Homology CDS 3066275 3066979 . + 0 ID=cds-WP_001241647.1;Parent=gene-CCO47_RS15100;Dbxref=GenBank:WP_001241647.1;Name=WP_001241647.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459931.1;locus_tag=CCO47_RS15100;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_001241647.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3067291 3067509 . + . ID=gene-CCO47_RS15110;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=CCO47_RS15110;old_locus_tag=CCO47_15110 NZ_CP075113.1 Protein Homology CDS 3067291 3067509 . + 0 ID=cds-WP_001040187.1;Parent=gene-CCO47_RS15110;Dbxref=GenBank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=CCO47_RS15110;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3067600 3068511 . - . ID=gene-CCO47_RS15115;Name=CCO47_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15115;old_locus_tag=CCO47_15115 NZ_CP075113.1 Protein Homology CDS 3067600 3068511 . - 0 ID=cds-WP_000597928.1;Parent=gene-CCO47_RS15115;Dbxref=GenBank:WP_000597928.1;Name=WP_000597928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459928.1;locus_tag=CCO47_RS15115;product=LysR family transcriptional regulator;protein_id=WP_000597928.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3068620 3069480 . + . ID=gene-CCO47_RS15120;Name=CCO47_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15120;old_locus_tag=CCO47_15120 NZ_CP075113.1 Protein Homology CDS 3068620 3069480 . + 0 ID=cds-WP_000809969.1;Parent=gene-CCO47_RS15120;Dbxref=GenBank:WP_000809969.1;Name=WP_000809969.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=CCO47_RS15120;product=pirin family protein;protein_id=WP_000809969.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3069500 3070177 . + . ID=gene-CCO47_RS15125;Name=CCO47_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15125;old_locus_tag=CCO47_15125 NZ_CP075113.1 Protein Homology CDS 3069500 3070177 . + 0 ID=cds-WP_000097893.1;Parent=gene-CCO47_RS15125;Dbxref=GenBank:WP_000097893.1;Name=WP_000097893.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=CCO47_RS15125;product=hydrolase;protein_id=WP_000097893.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3070326 3070413 . + . ID=gene-CCO47_RS15130;Name=CCO47_RS15130;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS15130;old_locus_tag=CCO47_15130 NZ_CP075113.1 tRNAscan-SE tRNA 3070326 3070413 . + . ID=rna-CCO47_RS15130;Parent=gene-CCO47_RS15130;anticodon=(pos:3070360..3070362);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS15130;product=tRNA-Ser NZ_CP075113.1 tRNAscan-SE exon 3070326 3070413 . + . ID=exon-CCO47_RS15130-1;Parent=rna-CCO47_RS15130;anticodon=(pos:3070360..3070362);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS15130;product=tRNA-Ser NZ_CP075113.1 RefSeq pseudogene 3070609 3070962 . + . ID=gene-CCO47_RS15135;Name=CCO47_RS15135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS15135;old_locus_tag=CCO47_15135;partial=true;pseudo=true;start_range=.,3070609 NZ_CP075113.1 Protein Homology CDS 3070609 3070962 . + 0 ID=cds-CCO47_RS15135;Parent=gene-CCO47_RS15135;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524896.1;locus_tag=CCO47_RS15135;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,3070609;transl_table=11 NZ_CP075113.1 RefSeq gene 3071124 3071321 . + . ID=gene-CCO47_RS15140;Name=CCO47_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15140;old_locus_tag=CCO47_15140 NZ_CP075113.1 Protein Homology CDS 3071124 3071321 . + 0 ID=cds-WP_001117984.1;Parent=gene-CCO47_RS15140;Dbxref=GenBank:WP_001117984.1;Name=WP_001117984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111984.1;locus_tag=CCO47_RS15140;product=hypothetical protein;protein_id=WP_001117984.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3071534 3073810 . - . ID=gene-CCO47_RS15145;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=CCO47_RS15145;old_locus_tag=CCO47_15145 NZ_CP075113.1 Protein Homology CDS 3071534 3073810 . - 0 ID=cds-WP_000934064.1;Parent=gene-CCO47_RS15145;Dbxref=GenBank:WP_000934064.1;Name=WP_000934064.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=CCO47_RS15145;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_000934064.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3073841 3074161 . - . ID=gene-CCO47_RS15150;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=CCO47_RS15150;old_locus_tag=CCO47_15150 NZ_CP075113.1 Protein Homology CDS 3073841 3074161 . - 0 ID=cds-WP_000520789.1;Parent=gene-CCO47_RS15150;Dbxref=GenBank:WP_000520789.1;Name=WP_000520789.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=CCO47_RS15150;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520789.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3074257 3074334 . - . ID=gene-CCO47_RS15155;Name=CCO47_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15155;old_locus_tag=CCO47_15155 NZ_CP075113.1 Protein Homology CDS 3074257 3074334 . - 0 ID=cds-WP_212742690.1;Parent=gene-CCO47_RS15155;Dbxref=GenBank:WP_212742690.1;Name=WP_212742690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=CCO47_RS15155;product=hypothetical protein;protein_id=WP_212742690.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3074485 3074706 . + . ID=gene-CCO47_RS15160;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=CCO47_RS15160;old_locus_tag=CCO47_15160 NZ_CP075113.1 Protein Homology CDS 3074485 3074706 . + 0 ID=cds-WP_000447499.1;Parent=gene-CCO47_RS15160;Dbxref=GenBank:WP_000447499.1;Name=WP_000447499.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=CCO47_RS15160;product=cold shock-like protein CspD;protein_id=WP_000447499.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3074836 3076782 . - . ID=gene-CCO47_RS15165;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=CCO47_RS15165;old_locus_tag=CCO47_15165 NZ_CP075113.1 Protein Homology CDS 3074836 3076782 . - 0 ID=cds-WP_000125884.1;Parent=gene-CCO47_RS15165;Dbxref=GenBank:WP_000125884.1;Name=WP_000125884.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459919.1;locus_tag=CCO47_RS15165;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_000125884.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3076779 3077897 . - . ID=gene-CCO47_RS15170;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=CCO47_RS15170;old_locus_tag=CCO47_15170 NZ_CP075113.1 Protein Homology CDS 3076779 3077897 . - 0 ID=cds-WP_001201752.1;Parent=gene-CCO47_RS15170;Dbxref=GenBank:WP_001201752.1;Name=WP_001201752.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=CCO47_RS15170;product=macrolide transporter subunit MacA;protein_id=WP_001201752.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3078043 3078993 . + . ID=gene-CCO47_RS15175;Name=CCO47_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15175;old_locus_tag=CCO47_15175 NZ_CP075113.1 Protein Homology CDS 3078043 3078993 . + 0 ID=cds-WP_001537300.1;Parent=gene-CCO47_RS15175;Dbxref=GenBank:WP_001537300.1;Name=WP_001537300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519667.1;locus_tag=CCO47_RS15175;product=VirK/YbjX family protein;protein_id=WP_001537300.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3078990 3080648 . - . ID=gene-CCO47_RS15180;Name=CCO47_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15180;old_locus_tag=CCO47_15180 NZ_CP075113.1 Protein Homology CDS 3078990 3080648 . - 0 ID=cds-WP_000599761.1;Parent=gene-CCO47_RS15180;Dbxref=GenBank:WP_000599761.1;Name=WP_000599761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=CCO47_RS15180;product=ATP-dependent endonuclease;protein_id=WP_000599761.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3080850 3081749 . + . ID=gene-CCO47_RS15185;Name=CCO47_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15185;old_locus_tag=CCO47_15185 NZ_CP075113.1 Protein Homology CDS 3080850 3081749 . + 0 ID=cds-WP_000491118.1;Parent=gene-CCO47_RS15185;Dbxref=GenBank:WP_000491118.1;Name=WP_000491118.1;Ontology_term=GO:1903401,GO:0015661;gbkey=CDS;go_function=L-lysine efflux transmembrane transporter activity|0015661||IEA;go_process=L-lysine transmembrane transport|1903401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=CCO47_RS15185;product=LysO family transporter;protein_id=WP_000491118.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3081893 3083545 . + . ID=gene-CCO47_RS15190;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=CCO47_RS15190;old_locus_tag=CCO47_15190 NZ_CP075113.1 Protein Homology CDS 3081893 3083545 . + 0 ID=cds-WP_000458788.1;Parent=gene-CCO47_RS15190;Dbxref=GenBank:WP_000458788.1;Name=WP_000458788.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=CCO47_RS15190;product=hydroxylamine reductase;protein_id=WP_000458788.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3083557 3084525 . + . ID=gene-CCO47_RS15195;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=CCO47_RS15195;old_locus_tag=CCO47_15195 NZ_CP075113.1 Protein Homology CDS 3083557 3084525 . + 0 ID=cds-WP_001675420.1;Parent=gene-CCO47_RS15195;Dbxref=GenBank:WP_001675420.1;Name=WP_001675420.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=CCO47_RS15195;product=NADH oxidoreductase;protein_id=WP_001675420.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3084684 3086402 . + . ID=gene-CCO47_RS15200;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=CCO47_RS15200;old_locus_tag=CCO47_15200 NZ_CP075113.1 Protein Homology CDS 3084684 3086402 . + 0 ID=cds-WP_000815309.1;Parent=gene-CCO47_RS15200;Dbxref=GenBank:WP_000815309.1;Name=WP_000815309.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459912.1;locus_tag=CCO47_RS15200;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_000815309.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3086441 3087442 . + . ID=gene-CCO47_RS15205;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=CCO47_RS15205;old_locus_tag=CCO47_15205 NZ_CP075113.1 Protein Homology CDS 3086441 3087442 . + 0 ID=cds-WP_000566338.1;Parent=gene-CCO47_RS15205;Dbxref=GenBank:WP_000566338.1;Name=WP_000566338.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=CCO47_RS15205;product=low-specificity L-threonine aldolase;protein_id=WP_000566338.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3087453 3088886 . + . ID=gene-CCO47_RS15210;Name=CCO47_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15210;old_locus_tag=CCO47_15210 NZ_CP075113.1 Protein Homology CDS 3087453 3088886 . + 0 ID=cds-WP_000068996.1;Parent=gene-CCO47_RS15210;Dbxref=GenBank:WP_000068996.1;Name=WP_000068996.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459910.1;locus_tag=CCO47_RS15210;product=SDR family oxidoreductase;protein_id=WP_000068996.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3088982 3089995 . + . ID=gene-CCO47_RS15215;Name=CCO47_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15215;old_locus_tag=CCO47_15215 NZ_CP075113.1 Protein Homology CDS 3088982 3089995 . + 0 ID=cds-WP_000866905.1;Parent=gene-CCO47_RS15215;Dbxref=GenBank:WP_000866905.1;Name=WP_000866905.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459909.1;locus_tag=CCO47_RS15215;product=3-beta-hydroxysteroid dehydrogenase;protein_id=WP_000866905.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3089992 3090822 . - . ID=gene-CCO47_RS15220;Name=CCO47_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15220;old_locus_tag=CCO47_15220 NZ_CP075113.1 Protein Homology CDS 3089992 3090822 . - 0 ID=cds-WP_000645850.1;Parent=gene-CCO47_RS15220;Dbxref=GenBank:WP_000645850.1;Name=WP_000645850.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745,GO:0042834,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459908.1;locus_tag=CCO47_RS15220;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_000645850.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3090819 3091142 . - . ID=gene-CCO47_RS15225;Name=CCO47_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15225;old_locus_tag=CCO47_15225 NZ_CP075113.1 Protein Homology CDS 3090819 3091142 . - 0 ID=cds-WP_001160727.1;Parent=gene-CCO47_RS15225;Dbxref=GenBank:WP_001160727.1;Name=WP_001160727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=CCO47_RS15225;product=heavy metal-binding domain-containing protein;protein_id=WP_001160727.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3091270 3091785 . + . ID=gene-CCO47_RS15230;Name=CCO47_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15230;old_locus_tag=CCO47_15230 NZ_CP075113.1 Protein Homology CDS 3091270 3091785 . + 0 ID=cds-WP_001270725.1;Parent=gene-CCO47_RS15230;Dbxref=GenBank:WP_001270725.1;Name=WP_001270725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459868.1;locus_tag=CCO47_RS15230;product=lipoprotein;protein_id=WP_001270725.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3092015 3092743 . + . ID=gene-CCO47_RS15235;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=CCO47_RS15235;old_locus_tag=CCO47_15235 NZ_CP075113.1 Protein Homology CDS 3092015 3092743 . + 0 ID=cds-WP_000027186.1;Parent=gene-CCO47_RS15235;Dbxref=GenBank:WP_000027186.1;Name=WP_000027186.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=CCO47_RS15235;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027186.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3092761 3093492 . + . ID=gene-CCO47_RS15240;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=CCO47_RS15240;old_locus_tag=CCO47_15240 NZ_CP075113.1 Protein Homology CDS 3092761 3093492 . + 0 ID=cds-WP_000756586.1;Parent=gene-CCO47_RS15240;Dbxref=GenBank:WP_000756586.1;Name=WP_000756586.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459866.1;locus_tag=CCO47_RS15240;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=WP_000756586.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3093499 3094215 . + . ID=gene-CCO47_RS15245;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=CCO47_RS15245;old_locus_tag=CCO47_15245 NZ_CP075113.1 Protein Homology CDS 3093499 3094215 . + 0 ID=cds-WP_001001677.1;Parent=gene-CCO47_RS15245;Dbxref=GenBank:WP_001001677.1;Name=WP_001001677.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459865.1;locus_tag=CCO47_RS15245;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001677.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3094215 3094883 . + . ID=gene-CCO47_RS15250;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=CCO47_RS15250;old_locus_tag=CCO47_15250 NZ_CP075113.1 Protein Homology CDS 3094215 3094883 . + 0 ID=cds-WP_000895396.1;Parent=gene-CCO47_RS15250;Dbxref=GenBank:WP_000895396.1;Name=WP_000895396.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459864.1;locus_tag=CCO47_RS15250;product=arginine ABC transporter permease ArtM;protein_id=WP_000895396.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3095120 3095851 . + . ID=gene-CCO47_RS15255;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=CCO47_RS15255;old_locus_tag=CCO47_15255 NZ_CP075113.1 Protein Homology CDS 3095120 3095851 . + 0 ID=cds-WP_000737538.1;Parent=gene-CCO47_RS15255;Dbxref=GenBank:WP_000737538.1;Name=WP_000737538.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459863.1;locus_tag=CCO47_RS15255;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=WP_000737538.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3096059 3097546 . - . ID=gene-CCO47_RS15260;Name=CCO47_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15260;old_locus_tag=CCO47_15260 NZ_CP075113.1 Protein Homology CDS 3096059 3097546 . - 0 ID=cds-WP_000644036.1;Parent=gene-CCO47_RS15260;Dbxref=GenBank:WP_000644036.1;Name=WP_000644036.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459862.1;locus_tag=CCO47_RS15260;product=sulfatase;protein_id=WP_000644036.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3097556 3097876 . - . ID=gene-CCO47_RS15265;Name=CCO47_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15265;old_locus_tag=CCO47_15265 NZ_CP075113.1 Protein Homology CDS 3097556 3097876 . - 0 ID=cds-WP_000567331.1;Parent=gene-CCO47_RS15265;Dbxref=GenBank:WP_000567331.1;Name=WP_000567331.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=CCO47_RS15265;product=PTS sugar transporter subunit IIB;protein_id=WP_000567331.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3097906 3099249 . - . ID=gene-CCO47_RS15270;Name=CCO47_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15270;old_locus_tag=CCO47_15270 NZ_CP075113.1 Protein Homology CDS 3097906 3099249 . - 0 ID=cds-WP_000399313.1;Parent=gene-CCO47_RS15270;Dbxref=GenBank:WP_000399313.1;Name=WP_000399313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=CCO47_RS15270;product=PTS sugar transporter subunit IIC;protein_id=WP_000399313.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3099544 3100671 . - . ID=gene-CCO47_RS15275;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=CCO47_RS15275;old_locus_tag=CCO47_15275 NZ_CP075113.1 Protein Homology CDS 3099544 3100671 . - 0 ID=cds-WP_001149796.1;Parent=gene-CCO47_RS15275;Dbxref=GenBank:WP_001149796.1;Name=WP_001149796.1;Ontology_term=GO:0000154,GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA,RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149796.1;locus_tag=CCO47_RS15275;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_001149796.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3100714 3101187 . - . ID=gene-CCO47_RS15280;Name=CCO47_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15280;old_locus_tag=CCO47_15280 NZ_CP075113.1 Protein Homology CDS 3100714 3101187 . - 0 ID=cds-WP_000505788.1;Parent=gene-CCO47_RS15280;Dbxref=GenBank:WP_000505788.1;Name=WP_000505788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459858.1;locus_tag=CCO47_RS15280;product=YbjO family protein;protein_id=WP_000505788.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3101261 3102106 . - . ID=gene-CCO47_RS15285;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=CCO47_RS15285;old_locus_tag=CCO47_15285 NZ_CP075113.1 Protein Homology CDS 3101261 3102106 . - 0 ID=cds-WP_001061632.1;Parent=gene-CCO47_RS15285;Dbxref=GenBank:WP_001061632.1;Name=WP_001061632.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=CCO47_RS15285;product=putrescine ABC transporter permease PotI;protein_id=WP_001061632.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3102103 3103056 . - . ID=gene-CCO47_RS15290;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=CCO47_RS15290;old_locus_tag=CCO47_15290 NZ_CP075113.1 Protein Homology CDS 3102103 3103056 . - 0 ID=cds-WP_000105453.1;Parent=gene-CCO47_RS15290;Dbxref=GenBank:WP_000105453.1;Name=WP_000105453.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=CCO47_RS15290;product=putrescine ABC transporter permease PotH;protein_id=WP_000105453.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3103066 3104199 . - . ID=gene-CCO47_RS15295;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=CCO47_RS15295;old_locus_tag=CCO47_15295 NZ_CP075113.1 Protein Homology CDS 3103066 3104199 . - 0 ID=cds-WP_001000700.1;Parent=gene-CCO47_RS15295;Dbxref=GenBank:WP_001000700.1;Name=WP_001000700.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=CCO47_RS15295;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_001000700.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3104287 3105399 . - . ID=gene-CCO47_RS15300;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=CCO47_RS15300;old_locus_tag=CCO47_15300 NZ_CP075113.1 Protein Homology CDS 3104287 3105399 . - 0 ID=cds-WP_000125769.1;Parent=gene-CCO47_RS15300;Dbxref=GenBank:WP_000125769.1;Name=WP_000125769.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=CCO47_RS15300;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_000125769.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3105748 3106224 . - . ID=gene-CCO47_RS15305;Name=CCO47_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15305;old_locus_tag=CCO47_15305 NZ_CP075113.1 Protein Homology CDS 3105748 3106224 . - 0 ID=cds-WP_000624814.1;Parent=gene-CCO47_RS15305;Dbxref=GenBank:WP_000624814.1;Name=WP_000624814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459853.1;locus_tag=CCO47_RS15305;product=YbjN domain-containing protein;protein_id=WP_000624814.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3106320 3107222 . - . ID=gene-CCO47_RS15310;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=CCO47_RS15310;old_locus_tag=CCO47_15310 NZ_CP075113.1 Protein Homology CDS 3106320 3107222 . - 0 ID=cds-WP_000684361.1;Parent=gene-CCO47_RS15310;Dbxref=GenBank:WP_000684361.1;Name=WP_000684361.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459852.1;locus_tag=CCO47_RS15310;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_000684361.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3107280 3108002 . - . ID=gene-CCO47_RS15315;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=CCO47_RS15315;old_locus_tag=CCO47_15315 NZ_CP075113.1 Protein Homology CDS 3107280 3108002 . - 0 ID=cds-WP_000075300.1;Parent=gene-CCO47_RS15315;Dbxref=GenBank:WP_000075300.1;Name=WP_000075300.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459851.1;locus_tag=CCO47_RS15315;product=nitroreductase NfsA;protein_id=WP_000075300.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3107986 3108276 . - . ID=gene-CCO47_RS15320;Name=CCO47_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15320;old_locus_tag=CCO47_15320 NZ_CP075113.1 Protein Homology CDS 3107986 3108276 . - 0 ID=cds-WP_001259137.1;Parent=gene-CCO47_RS15320;Dbxref=GenBank:WP_001259137.1;Name=WP_001259137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459850.1;locus_tag=CCO47_RS15320;product=YbjC family protein;protein_id=WP_001259137.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3108446 3108709 . + . ID=gene-CCO47_RS15325;Name=CCO47_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15325;old_locus_tag=CCO47_15325 NZ_CP075113.1 Protein Homology CDS 3108446 3108709 . + 0 ID=cds-WP_000495513.1;Parent=gene-CCO47_RS15325;Dbxref=GenBank:WP_000495513.1;Name=WP_000495513.1;Ontology_term=GO:0045454,GO:0009055,GO:0015035;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459849.1;locus_tag=CCO47_RS15325;product=GrxA family glutaredoxin;protein_id=WP_000495513.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3108741 3109118 . - . ID=gene-CCO47_RS15330;Name=CCO47_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15330;old_locus_tag=CCO47_15330 NZ_CP075113.1 Protein Homology CDS 3108741 3109118 . - 0 ID=cds-WP_000680850.1;Parent=gene-CCO47_RS15330;Dbxref=GenBank:WP_000680850.1;Name=WP_000680850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459848.1;locus_tag=CCO47_RS15330;product=inner membrane protein YbjM;protein_id=WP_000680850.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3109389 3111074 . + . ID=gene-CCO47_RS15335;Name=CCO47_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15335;old_locus_tag=CCO47_15335 NZ_CP075113.1 Protein Homology CDS 3109389 3111074 . + 0 ID=cds-WP_001024853.1;Parent=gene-CCO47_RS15335;Dbxref=GenBank:WP_001024853.1;Name=WP_001024853.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=CCO47_RS15335;product=aspartate:alanine antiporter;protein_id=WP_001024853.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3111191 3111811 . - . ID=gene-CCO47_RS15340;Name=CCO47_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15340;old_locus_tag=CCO47_15340 NZ_CP075113.1 Protein Homology CDS 3111191 3111811 . - 0 ID=cds-WP_000661881.1;Parent=gene-CCO47_RS15340;Dbxref=GenBank:WP_000661881.1;Name=WP_000661881.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459846.1;locus_tag=CCO47_RS15340;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000661881.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3111979 3113190 . + . ID=gene-CCO47_RS15345;Name=CCO47_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15345;old_locus_tag=CCO47_15345 NZ_CP075113.1 Protein Homology CDS 3111979 3113190 . + 0 ID=cds-WP_000217416.1;Parent=gene-CCO47_RS15345;Dbxref=GenBank:WP_000217416.1;Name=WP_000217416.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=CCO47_RS15345;product=MFS transporter;protein_id=WP_000217416.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3113187 3114002 . + . ID=gene-CCO47_RS15350;Name=CCO47_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15350;old_locus_tag=CCO47_15350 NZ_CP075113.1 Protein Homology CDS 3113187 3114002 . + 0 ID=cds-WP_000023547.1;Parent=gene-CCO47_RS15350;Dbxref=GenBank:WP_000023547.1;Name=WP_000023547.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459844.1;locus_tag=CCO47_RS15350;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000023547.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3114056 3115288 . - . ID=gene-CCO47_RS15355;Name=CCO47_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15355;old_locus_tag=CCO47_15355 NZ_CP075113.1 Protein Homology CDS 3114056 3115288 . - 0 ID=cds-WP_001181285.1;Parent=gene-CCO47_RS15355;Dbxref=GenBank:WP_001181285.1;Name=WP_001181285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459843.1;locus_tag=CCO47_RS15355;product=MFS transporter;protein_id=WP_001181285.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3115601 3116209 . + . ID=gene-CCO47_RS15360;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=CCO47_RS15360;old_locus_tag=CCO47_15360 NZ_CP075113.1 Protein Homology CDS 3115601 3116209 . + 0 ID=cds-WP_001531378.1;Parent=gene-CCO47_RS15360;Dbxref=GenBank:WP_001531378.1;Name=WP_001531378.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459842.1;locus_tag=CCO47_RS15360;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001531378.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3116281 3117039 . + . ID=gene-CCO47_RS15365;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=CCO47_RS15365;old_locus_tag=CCO47_15365 NZ_CP075113.1 Protein Homology CDS 3116281 3117039 . + 0 ID=cds-WP_000450098.1;Parent=gene-CCO47_RS15365;Dbxref=GenBank:WP_000450098.1;Name=WP_000450098.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459841.1;locus_tag=CCO47_RS15365;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450098.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3117084 3118286 . - . ID=gene-CCO47_RS15370;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=CCO47_RS15370;old_locus_tag=CCO47_15370 NZ_CP075113.1 Protein Homology CDS 3117084 3118286 . - 0 ID=cds-WP_000195712.1;Parent=gene-CCO47_RS15370;Dbxref=GenBank:WP_000195712.1;Name=WP_000195712.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459840.1;locus_tag=CCO47_RS15370;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_000195712.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3118530 3119156 . + . ID=gene-CCO47_RS15375;Name=CCO47_RS15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15375;old_locus_tag=CCO47_15375 NZ_CP075113.1 Protein Homology CDS 3118530 3119156 . + 0 ID=cds-WP_000631900.1;Parent=gene-CCO47_RS15375;Dbxref=GenBank:WP_000631900.1;Name=WP_000631900.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459839.1;locus_tag=CCO47_RS15375;product=glutathione S-transferase family protein;protein_id=WP_000631900.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3119153 3119655 . - . ID=gene-CCO47_RS24215;Name=CCO47_RS24215;end_range=3119655,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24215;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 3119153 3119655 . - 0 ID=cds-CCO47_RS24215;Parent=gene-CCO47_RS24215;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3119655,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000554957.1;locus_tag=CCO47_RS24215;partial=true;product=PQQ-dependent sugar dehydrogenase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3119641 3119844 . - . ID=gene-CCO47_RS24220;Name=CCO47_RS24220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24220;partial=true;pseudo=true;start_range=.,3119641 NZ_CP075113.1 Protein Homology CDS 3119641 3119844 . - 0 ID=cds-CCO47_RS24220;Parent=gene-CCO47_RS24220;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611160.1;locus_tag=CCO47_RS24220;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,3119641;transl_table=11 NZ_CP075113.1 RefSeq gene 3120191 3120616 . + . ID=gene-CCO47_RS15390;Name=CCO47_RS15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15390;old_locus_tag=CCO47_15390 NZ_CP075113.1 Protein Homology CDS 3120191 3120616 . + 0 ID=cds-WP_000287110.1;Parent=gene-CCO47_RS15390;Dbxref=GenBank:WP_000287110.1;Name=WP_000287110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459837.1;locus_tag=CCO47_RS15390;product=GntP family permease;protein_id=WP_000287110.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3120881 3121771 . + . ID=gene-CCO47_RS15395;Name=CCO47_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15395;old_locus_tag=CCO47_15395 NZ_CP075113.1 Protein Homology CDS 3120881 3121771 . + 0 ID=cds-WP_000545335.1;Parent=gene-CCO47_RS15395;Dbxref=GenBank:WP_000545335.1;Name=WP_000545335.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459836.1;locus_tag=CCO47_RS15395;product=LysR family transcriptional regulator;protein_id=WP_000545335.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3121777 3123462 . - . ID=gene-CCO47_RS15400;Name=CCO47_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15400;old_locus_tag=CCO47_15400 NZ_CP075113.1 Protein Homology CDS 3121777 3123462 . - 0 ID=cds-WP_001000310.1;Parent=gene-CCO47_RS15400;Dbxref=GenBank:WP_001000310.1;Name=WP_001000310.1;Ontology_term=GO:0022900,GO:0004174,GO:0046872,GO:0051539;gbkey=CDS;go_function=electron-transferring-flavoprotein dehydrogenase activity|0004174||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459835.1;locus_tag=CCO47_RS15400;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WP_001000310.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3123910 3125073 . - . ID=gene-CCO47_RS15405;Name=CCO47_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15405;old_locus_tag=CCO47_15405 NZ_CP075113.1 Protein Homology CDS 3123910 3125073 . - 0 ID=cds-WP_000835388.1;Parent=gene-CCO47_RS15405;Dbxref=GenBank:WP_000835388.1;Name=WP_000835388.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459834.1;locus_tag=CCO47_RS15405;product=acyl-CoA dehydrogenase family protein;protein_id=WP_000835388.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3125137 3125334 . - . ID=gene-CCO47_RS15410;Name=CCO47_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15410;old_locus_tag=CCO47_15410 NZ_CP075113.1 GeneMarkS-2+ CDS 3125137 3125334 . - 0 ID=cds-WP_001200424.1;Parent=gene-CCO47_RS15410;Dbxref=GenBank:WP_001200424.1;Name=WP_001200424.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO47_RS15410;product=hypothetical protein;protein_id=WP_001200424.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3125367 3126320 . - . ID=gene-CCO47_RS15415;Name=CCO47_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15415;old_locus_tag=CCO47_15415 NZ_CP075113.1 Protein Homology CDS 3125367 3126320 . - 0 ID=cds-WP_000157774.1;Parent=gene-CCO47_RS15415;Dbxref=GenBank:WP_000157774.1;Name=WP_000157774.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459833.1;locus_tag=CCO47_RS15415;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_000157774.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3126331 3127080 . - . ID=gene-CCO47_RS15420;Name=CCO47_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15420;old_locus_tag=CCO47_15420 NZ_CP075113.1 Protein Homology CDS 3126331 3127080 . - 0 ID=cds-WP_001523061.1;Parent=gene-CCO47_RS15420;Dbxref=GenBank:WP_001523061.1;Name=WP_001523061.1;Ontology_term=GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002949615.1;locus_tag=CCO47_RS15420;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_001523061.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3127103 3127618 . - . ID=gene-CCO47_RS15425;Name=CCO47_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15425;old_locus_tag=CCO47_15425 NZ_CP075113.1 Protein Homology CDS 3127103 3127618 . - 0 ID=cds-WP_001574067.1;Parent=gene-CCO47_RS15425;Dbxref=GenBank:WP_001574067.1;Name=WP_001574067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459831.1;locus_tag=CCO47_RS15425;product=STM0854 family CoA ester lyase;protein_id=WP_001574067.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3127944 3128229 . - . ID=gene-CCO47_RS24225;Name=CCO47_RS24225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24225;partial=true;pseudo=true;start_range=.,3127944 NZ_CP075113.1 Protein Homology CDS 3127944 3128229 . - 0 ID=cds-CCO47_RS24225;Parent=gene-CCO47_RS24225;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_046881606.1;locus_tag=CCO47_RS24225;partial=true;product=IS4-like element ISEc60 family transposase;pseudo=true;start_range=.,3127944;transl_table=11 NZ_CP075113.1 RefSeq gene 3128331 3128714 . - . ID=gene-CCO47_RS15430;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=CCO47_RS15430;old_locus_tag=CCO47_15430 NZ_CP075113.1 Protein Homology CDS 3128331 3128714 . - 0 ID=cds-WP_000259651.1;Parent=gene-CCO47_RS15430;Dbxref=GenBank:WP_000259651.1;Name=WP_000259651.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459830.1;locus_tag=CCO47_RS15430;product=biofilm formation regulator BssR;protein_id=WP_000259651.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3128945 3130270 . + . ID=gene-CCO47_RS15435;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=CCO47_RS15435;old_locus_tag=CCO47_15435 NZ_CP075113.1 Protein Homology CDS 3128945 3130270 . + 0 ID=cds-WP_094912332.1;Parent=gene-CCO47_RS15435;Dbxref=GenBank:WP_094912332.1;Name=WP_094912332.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=CCO47_RS15435;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_094912332.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3130361 3131272 . - . ID=gene-CCO47_RS15440;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=CCO47_RS15440;old_locus_tag=CCO47_15440 NZ_CP075113.1 Protein Homology CDS 3130361 3131272 . - 0 ID=cds-WP_001236024.1;Parent=gene-CCO47_RS15440;Dbxref=GenBank:WP_001236024.1;Name=WP_001236024.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459828.1;locus_tag=CCO47_RS15440;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236024.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3131275 3132195 . - . ID=gene-CCO47_RS15445;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=CCO47_RS15445;old_locus_tag=CCO47_15445 NZ_CP075113.1 Protein Homology CDS 3131275 3132195 . - 0 ID=cds-WP_000936066.1;Parent=gene-CCO47_RS15445;Dbxref=GenBank:WP_000936066.1;Name=WP_000936066.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459827.1;locus_tag=CCO47_RS15445;product=glutathione ABC transporter permease GsiC;protein_id=WP_000936066.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3132256 3133794 . - . ID=gene-CCO47_RS15450;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=CCO47_RS15450;old_locus_tag=CCO47_15450 NZ_CP075113.1 Protein Homology CDS 3132256 3133794 . - 0 ID=cds-WP_000191440.1;Parent=gene-CCO47_RS15450;Dbxref=GenBank:WP_000191440.1;Name=WP_000191440.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459826.1;locus_tag=CCO47_RS15450;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_000191440.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3133827 3135698 . - . ID=gene-CCO47_RS15455;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=CCO47_RS15455;old_locus_tag=CCO47_15455 NZ_CP075113.1 Protein Homology CDS 3133827 3135698 . - 0 ID=cds-WP_001120577.1;Parent=gene-CCO47_RS15455;Dbxref=GenBank:WP_001120577.1;Name=WP_001120577.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=CCO47_RS15455;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_001120577.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3135709 3136650 . - . ID=gene-CCO47_RS15460;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=CCO47_RS15460;old_locus_tag=CCO47_15460 NZ_CP075113.1 Protein Homology CDS 3135709 3136650 . - 0 ID=cds-WP_001030488.1;Parent=gene-CCO47_RS15460;Dbxref=GenBank:WP_001030488.1;Name=WP_001030488.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459824.1;locus_tag=CCO47_RS15460;product=beta-aspartyl-peptidase;protein_id=WP_001030488.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3136854 3138089 . + . ID=gene-CCO47_RS15465;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=CCO47_RS15465;old_locus_tag=CCO47_15465 NZ_CP075113.1 Protein Homology CDS 3136854 3138089 . + 0 ID=cds-WP_000395783.1;Parent=gene-CCO47_RS15465;Dbxref=GenBank:WP_000395783.1;Name=WP_000395783.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=CCO47_RS15465;product=molybdopterin molybdotransferase MoeA;protein_id=WP_000395783.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3138089 3138838 . + . ID=gene-CCO47_RS15470;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=CCO47_RS15470;old_locus_tag=CCO47_15470 NZ_CP075113.1 Protein Homology CDS 3138089 3138838 . + 0 ID=cds-WP_000829281.1;Parent=gene-CCO47_RS15470;Dbxref=GenBank:WP_000829281.1;Name=WP_000829281.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459822.1;locus_tag=CCO47_RS15470;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_000829281.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3139116 3140015 . + . ID=gene-CCO47_RS15475;Name=CCO47_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15475;old_locus_tag=CCO47_15475 NZ_CP075113.1 Protein Homology CDS 3139116 3140015 . + 0 ID=cds-WP_000576953.1;Parent=gene-CCO47_RS15475;Dbxref=GenBank:WP_000576953.1;Name=WP_000576953.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459821.1;locus_tag=CCO47_RS15475;product=glycyl-radical enzyme activating protein;protein_id=WP_000576953.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3140021 3142453 . + . ID=gene-CCO47_RS15480;Name=CCO47_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15480;old_locus_tag=CCO47_15480 NZ_CP075113.1 Protein Homology CDS 3140021 3142453 . + 0 ID=cds-WP_000192665.1;Parent=gene-CCO47_RS15480;Dbxref=GenBank:WP_000192665.1;Name=WP_000192665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459820.1;locus_tag=CCO47_RS15480;product=glycyl radical protein;protein_id=WP_000192665.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3142531 3143340 . - . ID=gene-CCO47_RS15485;Name=CCO47_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15485;old_locus_tag=CCO47_15485 NZ_CP075113.1 Protein Homology CDS 3142531 3143340 . - 0 ID=cds-WP_000217910.1;Parent=gene-CCO47_RS15485;Dbxref=GenBank:WP_000217910.1;Name=WP_000217910.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459819.1;locus_tag=CCO47_RS15485;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000217910.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3143602 3144867 . + . ID=gene-CCO47_RS15490;Name=CCO47_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15490;old_locus_tag=CCO47_15490 NZ_CP075113.1 Protein Homology CDS 3143602 3144867 . + 0 ID=cds-WP_000210956.1;Parent=gene-CCO47_RS15490;Dbxref=GenBank:WP_000210956.1;Name=WP_000210956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459818.1;locus_tag=CCO47_RS15490;product=DUF1479 domain-containing protein;protein_id=WP_000210956.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3144989 3145072 . - . ID=gene-CCO47_RS24460;Name=CCO47_RS24460;end_range=3145072,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24460;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 3144989 3145072 . - 0 ID=cds-CCO47_RS24460;Parent=gene-CCO47_RS24460;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3145072,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961428.1;locus_tag=CCO47_RS24460;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3145063 3145794 . + . ID=gene-CCO47_RS15495;Name=CCO47_RS15495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS15495;old_locus_tag=CCO47_15495;partial=true;pseudo=true;start_range=.,3145063 NZ_CP075113.1 Protein Homology CDS 3145063 3145794 . + 0 ID=cds-CCO47_RS15495;Parent=gene-CCO47_RS15495;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000114249.1;locus_tag=CCO47_RS15495;partial=true;product=Cof-type HAD-IIB family hydrolase;pseudo=true;start_range=.,3145063;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3145823 3146566 . - . ID=gene-CCO47_RS15500;Name=CCO47_RS15500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS15500;old_locus_tag=CCO47_15500;pseudo=true NZ_CP075113.1 Protein Homology CDS 3145823 3146566 . - 0 ID=cds-CCO47_RS15500;Parent=gene-CCO47_RS15500;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459816.1;locus_tag=CCO47_RS15500;product=DUF4261 domain-containing protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3147174 3148766 . - . ID=gene-CCO47_RS15505;Name=CCO47_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15505;old_locus_tag=CCO47_15505 NZ_CP075113.1 Protein Homology CDS 3147174 3148766 . - 0 ID=cds-WP_000961477.1;Parent=gene-CCO47_RS15505;Dbxref=GenBank:WP_000961477.1;Name=WP_000961477.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459815.1;locus_tag=CCO47_RS15505;product=ABC-F family ATPase;protein_id=WP_000961477.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3148985 3149905 . + . ID=gene-CCO47_RS15510;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=CCO47_RS15510;old_locus_tag=CCO47_15510 NZ_CP075113.1 Protein Homology CDS 3148985 3149905 . + 0 ID=cds-WP_001056409.1;Parent=gene-CCO47_RS15510;Dbxref=GenBank:WP_001056409.1;Name=WP_001056409.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459814.1;locus_tag=CCO47_RS15510;product=L%2CD-transpeptidase;protein_id=WP_001056409.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3149949 3151061 . - . ID=gene-CCO47_RS15515;Name=CCO47_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15515;old_locus_tag=CCO47_15515 NZ_CP075113.1 Protein Homology CDS 3149949 3151061 . - 0 ID=cds-WP_000050089.1;Parent=gene-CCO47_RS15515;Dbxref=GenBank:WP_000050089.1;Name=WP_000050089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459813.1;locus_tag=CCO47_RS15515;product=anion transporter;protein_id=WP_000050089.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3151058 3151531 . - . ID=gene-CCO47_RS15520;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=CCO47_RS15520;old_locus_tag=CCO47_15520 NZ_CP075113.1 Protein Homology CDS 3151058 3151531 . - 0 ID=cds-WP_000533542.1;Parent=gene-CCO47_RS15520;Dbxref=GenBank:WP_000533542.1;Name=WP_000533542.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459812.1;locus_tag=CCO47_RS15520;product=manganese-binding transcriptional regulator MntR;protein_id=WP_000533542.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3151717 3151845 . + . ID=gene-CCO47_RS15525;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=CCO47_RS15525;old_locus_tag=CCO47_15525 NZ_CP075113.1 Protein Homology CDS 3151717 3151845 . + 0 ID=cds-WP_001001755.1;Parent=gene-CCO47_RS15525;Dbxref=GenBank:WP_001001755.1;Name=WP_001001755.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=CCO47_RS15525;product=manganase accumulation protein MntS;protein_id=WP_001001755.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3152110 3153690 . + . ID=gene-CCO47_RS15530;Name=CCO47_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15530;old_locus_tag=CCO47_15530 NZ_CP075113.1 Protein Homology CDS 3152110 3153690 . + 0 ID=cds-WP_001089315.1;Parent=gene-CCO47_RS15530;Dbxref=GenBank:WP_001089315.1;Name=WP_001089315.1;Ontology_term=GO:0009244,GO:1900727,GO:0016776;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=CCO47_RS15530;product=phosphoethanolamine transferase;protein_id=WP_001089315.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3153752 3154267 . - . ID=gene-CCO47_RS15535;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=CCO47_RS15535;old_locus_tag=CCO47_15535 NZ_CP075113.1 Protein Homology CDS 3153752 3154267 . - 0 ID=cds-WP_000716763.1;Parent=gene-CCO47_RS15535;Dbxref=GenBank:WP_000716763.1;Name=WP_000716763.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459810.1;locus_tag=CCO47_RS15535;product=outer membrane protein OmpX;protein_id=WP_000716763.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3154621 3155481 . + . ID=gene-CCO47_RS15540;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=CCO47_RS15540;old_locus_tag=CCO47_15540 NZ_CP075113.1 Protein Homology CDS 3154621 3155481 . + 0 ID=cds-WP_001119556.1;Parent=gene-CCO47_RS15540;Dbxref=GenBank:WP_001119556.1;Name=WP_001119556.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=CCO47_RS15540;product=threonine/homoserine exporter RhtA;protein_id=WP_001119556.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3155784 3156287 . + . ID=gene-CCO47_RS15545;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=CCO47_RS15545;old_locus_tag=CCO47_15545 NZ_CP075113.1 Protein Homology CDS 3155784 3156287 . + 0 ID=cds-WP_000100805.1;Parent=gene-CCO47_RS15545;Dbxref=GenBank:WP_000100805.1;Name=WP_000100805.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=CCO47_RS15545;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100805.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3156764 3157510 . + . ID=gene-CCO47_RS15550;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=CCO47_RS15550;old_locus_tag=CCO47_15550 NZ_CP075113.1 Protein Homology CDS 3156764 3157510 . + 0 ID=cds-WP_000838673.1;Parent=gene-CCO47_RS15550;Dbxref=GenBank:WP_000838673.1;Name=WP_000838673.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=CCO47_RS15550;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_000838673.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3157654 3158313 . + . ID=gene-CCO47_RS15555;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=CCO47_RS15555;old_locus_tag=CCO47_15555 NZ_CP075113.1 Protein Homology CDS 3157654 3158313 . + 0 ID=cds-WP_001159076.1;Parent=gene-CCO47_RS15555;Dbxref=GenBank:WP_001159076.1;Name=WP_001159076.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=CCO47_RS15555;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159076.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3158310 3159032 . + . ID=gene-CCO47_RS15560;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=CCO47_RS15560;old_locus_tag=CCO47_15560 NZ_CP075113.1 Protein Homology CDS 3158310 3159032 . + 0 ID=cds-WP_000569093.1;Parent=gene-CCO47_RS15560;Dbxref=GenBank:WP_000569093.1;Name=WP_000569093.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=CCO47_RS15560;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_000569093.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3159151 3161373 . + . ID=gene-CCO47_RS15565;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=CCO47_RS15565;old_locus_tag=CCO47_15565 NZ_CP075113.1 Protein Homology CDS 3159151 3161373 . + 0 ID=cds-WP_001267699.1;Parent=gene-CCO47_RS15565;Dbxref=GenBank:WP_001267699.1;Name=WP_001267699.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=CCO47_RS15565;product=mechanosensitive channel protein;protein_id=WP_001267699.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3161370 3162296 . - . ID=gene-CCO47_RS15570;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=CCO47_RS15570;old_locus_tag=CCO47_15570 NZ_CP075113.1 Protein Homology CDS 3161370 3162296 . - 0 ID=cds-WP_001275962.1;Parent=gene-CCO47_RS15570;Dbxref=GenBank:WP_001275962.1;Name=WP_001275962.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=CCO47_RS15570;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_001275962.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3162501 3162767 . + . ID=gene-CCO47_RS15575;Name=CCO47_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15575;old_locus_tag=CCO47_15575 NZ_CP075113.1 Protein Homology CDS 3162501 3162767 . + 0 ID=cds-WP_000146332.1;Parent=gene-CCO47_RS15575;Dbxref=GenBank:WP_000146332.1;Name=WP_000146332.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459802.1;locus_tag=CCO47_RS15575;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_000146332.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3163052 3163312 . + . ID=gene-CCO47_RS15580;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=CCO47_RS15580;old_locus_tag=CCO47_15580 NZ_CP075113.1 Protein Homology CDS 3163052 3163312 . + 0 ID=cds-WP_000849089.1;Parent=gene-CCO47_RS15580;Dbxref=GenBank:WP_000849089.1;Name=WP_000849089.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459801.1;locus_tag=CCO47_RS15580;product=DUF1471 family protein YbiJ;protein_id=WP_000849089.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3163468 3164442 . - . ID=gene-CCO47_RS15585;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=CCO47_RS15585;old_locus_tag=CCO47_15585 NZ_CP075113.1 Protein Homology CDS 3163468 3164442 . - 0 ID=cds-WP_000386476.1;Parent=gene-CCO47_RS15585;Dbxref=GenBank:WP_000386476.1;Name=WP_000386476.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=CCO47_RS15585;product=DNA-binding protein YbiB;protein_id=WP_000386476.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3164472 3166616 . - . ID=gene-CCO47_RS15590;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=CCO47_RS15590;old_locus_tag=CCO47_15590 NZ_CP075113.1 Protein Homology CDS 3164472 3166616 . - 0 ID=cds-WP_001218635.1;Parent=gene-CCO47_RS15590;Dbxref=GenBank:WP_001218635.1;Name=WP_001218635.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=CCO47_RS15590;product=ATP-dependent DNA helicase DinG;protein_id=WP_001218635.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3166824 3168185 . - . ID=gene-CCO47_RS15595;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=CCO47_RS15595;old_locus_tag=CCO47_15595 NZ_CP075113.1 Protein Homology CDS 3166824 3168185 . - 0 ID=cds-WP_000007065.1;Parent=gene-CCO47_RS15595;Dbxref=GenBank:WP_000007065.1;Name=WP_000007065.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459798.1;locus_tag=CCO47_RS15595;product=ATP-dependent RNA helicase RhlE;protein_id=WP_000007065.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3168415 3169089 . + . ID=gene-CCO47_RS15600;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=CCO47_RS15600;old_locus_tag=CCO47_15600 NZ_CP075113.1 Protein Homology CDS 3168415 3169089 . + 0 ID=cds-WP_001025254.1;Parent=gene-CCO47_RS15600;Dbxref=GenBank:WP_001025254.1;Name=WP_001025254.1;Ontology_term=GO:2000142,GO:0003700;gbkey=CDS;gene=cecR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459797.1;locus_tag=CCO47_RS15600;product=transcriptional regulator CecR;protein_id=WP_001025254.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3169089 3170084 . + . ID=gene-CCO47_RS15605;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=CCO47_RS15605;old_locus_tag=CCO47_15605 NZ_CP075113.1 Protein Homology CDS 3169089 3170084 . + 0 ID=cds-WP_000743436.1;Parent=gene-CCO47_RS15605;Dbxref=GenBank:WP_000743436.1;Name=WP_000743436.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=CCO47_RS15605;product=secretion protein HlyD;protein_id=WP_000743436.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3170077 3171813 . + . ID=gene-CCO47_RS15610;Name=CCO47_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15610;old_locus_tag=CCO47_15610 NZ_CP075113.1 Protein Homology CDS 3170077 3171813 . + 0 ID=cds-WP_001287611.1;Parent=gene-CCO47_RS15610;Dbxref=GenBank:WP_001287611.1;Name=WP_001287611.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459795.1;locus_tag=CCO47_RS15610;product=ATP-binding cassette domain-containing protein;protein_id=WP_001287611.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3171806 3172936 . + . ID=gene-CCO47_RS15615;Name=CCO47_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15615;old_locus_tag=CCO47_15615 NZ_CP075113.1 Protein Homology CDS 3171806 3172936 . + 0 ID=cds-WP_000045765.1;Parent=gene-CCO47_RS15615;Dbxref=GenBank:WP_000045765.1;Name=WP_000045765.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459794.1;locus_tag=CCO47_RS15615;product=ABC transporter permease;protein_id=WP_000045765.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3173052 3174158 . + . ID=gene-CCO47_RS15620;Name=CCO47_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15620;old_locus_tag=CCO47_15620 NZ_CP075113.1 Protein Homology CDS 3173052 3174158 . + 0 ID=cds-WP_000469051.1;Parent=gene-CCO47_RS15620;Dbxref=GenBank:WP_000469051.1;Name=WP_000469051.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459793.1;locus_tag=CCO47_RS15620;product=ABC transporter permease;protein_id=WP_000469051.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3174120 3174530 . - . ID=gene-CCO47_RS15625;Name=CCO47_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15625;old_locus_tag=CCO47_15625 NZ_CP075113.1 Protein Homology CDS 3174120 3174530 . - 0 ID=cds-WP_000871968.1;Parent=gene-CCO47_RS15625;Dbxref=GenBank:WP_000871968.1;Name=WP_000871968.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459792.1;locus_tag=CCO47_RS15625;product=YbhQ family protein;protein_id=WP_000871968.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3174663 3175421 . + . ID=gene-CCO47_RS15630;Name=CCO47_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15630;old_locus_tag=CCO47_15630 NZ_CP075113.1 Protein Homology CDS 3174663 3175421 . + 0 ID=cds-WP_000192039.1;Parent=gene-CCO47_RS15630;Dbxref=GenBank:WP_000192039.1;Name=WP_000192039.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=CCO47_RS15630;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_000192039.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3175418 3176659 . + . ID=gene-CCO47_RS15635;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=CCO47_RS15635;old_locus_tag=CCO47_15635 NZ_CP075113.1 Protein Homology CDS 3175418 3176659 . + 0 ID=cds-WP_000649641.1;Parent=gene-CCO47_RS15635;Dbxref=GenBank:WP_000649641.1;Name=WP_000649641.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459790.1;locus_tag=CCO47_RS15635;product=cardiolipin synthase ClsB;protein_id=WP_000649641.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3176659 3177621 . + . ID=gene-CCO47_RS15640;Name=CCO47_RS15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15640;old_locus_tag=CCO47_15640 NZ_CP075113.1 Protein Homology CDS 3176659 3177621 . + 0 ID=cds-WP_001129817.1;Parent=gene-CCO47_RS15640;Dbxref=GenBank:WP_001129817.1;Name=WP_001129817.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459789.1;locus_tag=CCO47_RS15640;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=WP_001129817.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3177624 3178183 . - . ID=gene-CCO47_RS24230;Name=CCO47_RS24230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24230;pseudo=true NZ_CP075113.1 Protein Homology CDS 3177624 3178183 . - 0 ID=cds-CCO47_RS24230;Parent=gene-CCO47_RS24230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459788.1;locus_tag=CCO47_RS24230;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3178191 3178799 . - . ID=gene-CCO47_RS15655;Name=CCO47_RS15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15655;old_locus_tag=CCO47_15655 NZ_CP075113.1 Protein Homology CDS 3178191 3178799 . - 0 ID=cds-WP_001574057.1;Parent=gene-CCO47_RS15655;Dbxref=GenBank:WP_001574057.1;Name=WP_001574057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459787.1;locus_tag=CCO47_RS15655;product=hypothetical protein;protein_id=WP_001574057.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3178823 3179530 . - . ID=gene-CCO47_RS15660;Name=CCO47_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15660;old_locus_tag=CCO47_15660 NZ_CP075113.1 Protein Homology CDS 3178823 3179530 . - 0 ID=cds-WP_000529062.1;Parent=gene-CCO47_RS15660;Dbxref=GenBank:WP_000529062.1;Name=WP_000529062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459786.1;locus_tag=CCO47_RS15660;product=Bax inhibitor-1 family protein;protein_id=WP_000529062.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3179675 3180379 . - . ID=gene-CCO47_RS15665;Name=CCO47_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15665;old_locus_tag=CCO47_15665 NZ_CP075113.1 Protein Homology CDS 3179675 3180379 . - 0 ID=cds-WP_000373611.1;Parent=gene-CCO47_RS15665;Dbxref=GenBank:WP_000373611.1;Name=WP_000373611.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459785.1;locus_tag=CCO47_RS15665;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000373611.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3180427 3180879 . - . ID=gene-CCO47_RS15670;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=CCO47_RS15670;old_locus_tag=CCO47_15670 NZ_CP075113.1 Protein Homology CDS 3180427 3180879 . - 0 ID=cds-WP_001209387.1;Parent=gene-CCO47_RS15670;Dbxref=GenBank:WP_001209387.1;Name=WP_001209387.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459784.1;locus_tag=CCO47_RS15670;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_001209387.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3180881 3181126 . - . ID=gene-CCO47_RS15675;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=CCO47_RS15675;old_locus_tag=CCO47_15675 NZ_CP075113.1 Protein Homology CDS 3180881 3181126 . - 0 ID=cds-WP_000598596.1;Parent=gene-CCO47_RS15675;Dbxref=GenBank:WP_000598596.1;Name=WP_000598596.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308889.1;locus_tag=CCO47_RS15675;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598596.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3181119 3181604 . - . ID=gene-CCO47_RS15680;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=CCO47_RS15680;old_locus_tag=CCO47_15680 NZ_CP075113.1 Protein Homology CDS 3181119 3181604 . - 0 ID=cds-WP_000080897.1;Parent=gene-CCO47_RS15680;Dbxref=GenBank:WP_000080897.1;Name=WP_000080897.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=CCO47_RS15680;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_000080897.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3181607 3182119 . - . ID=gene-CCO47_RS15685;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=CCO47_RS15685;old_locus_tag=CCO47_15685 NZ_CP075113.1 Protein Homology CDS 3181607 3182119 . - 0 ID=cds-WP_000084604.1;Parent=gene-CCO47_RS15685;Dbxref=GenBank:WP_000084604.1;Name=WP_000084604.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=CCO47_RS15685;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084604.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3182141 3183130 . - . ID=gene-CCO47_RS15690;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=CCO47_RS15690;old_locus_tag=CCO47_15690 NZ_CP075113.1 Protein Homology CDS 3182141 3183130 . - 0 ID=cds-WP_000168181.1;Parent=gene-CCO47_RS15690;Dbxref=GenBank:WP_000168181.1;Name=WP_000168181.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459780.1;locus_tag=CCO47_RS15690;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_000168181.1;transl_table=11 NZ_CP075113.1 cmsearch riboswitch 3183118 3183262 . - . ID=id-NZ_CP075113.1:3183118..3183262;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CP075113.1 RefSeq gene 3183527 3184435 . + . ID=gene-CCO47_RS15695;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=CCO47_RS15695;old_locus_tag=CCO47_15695 NZ_CP075113.1 Protein Homology CDS 3183527 3184435 . + 0 ID=cds-WP_001246038.1;Parent=gene-CCO47_RS15695;Dbxref=GenBank:WP_001246038.1;Name=WP_001246038.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459779.1;locus_tag=CCO47_RS15695;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_001246038.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3184527 3186794 . - . ID=gene-CCO47_RS15700;Name=slrP;gbkey=Gene;gene=slrP;gene_biotype=protein_coding;locus_tag=CCO47_RS15700;old_locus_tag=CCO47_15700 NZ_CP075113.1 Protein Homology CDS 3184527 3186794 . - 0 ID=cds-WP_000482010.1;Parent=gene-CCO47_RS15700;Dbxref=GenBank:WP_000482010.1;Name=WP_000482010.1;gbkey=CDS;gene=slrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459778.1;locus_tag=CCO47_RS15700;product=SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP;protein_id=WP_000482010.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3186802 3186975 . - . ID=gene-CCO47_RS15705;Name=CCO47_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15705;old_locus_tag=CCO47_15705 NZ_CP075113.1 Protein Homology CDS 3186802 3186975 . - 0 ID=cds-WP_001575831.1;Parent=gene-CCO47_RS15705;Dbxref=GenBank:WP_001575831.1;Name=WP_001575831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447236.1;locus_tag=CCO47_RS15705;product=hypothetical protein;protein_id=WP_001575831.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3187284 3189305 . - . ID=gene-CCO47_RS15710;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=CCO47_RS15710;old_locus_tag=CCO47_15710 NZ_CP075113.1 Protein Homology CDS 3187284 3189305 . - 0 ID=cds-WP_000042502.1;Parent=gene-CCO47_RS15710;Dbxref=GenBank:WP_000042502.1;Name=WP_000042502.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=CCO47_RS15710;product=excinuclease ABC subunit UvrB;protein_id=WP_000042502.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3189956 3190642 . - . ID=gene-CCO47_RS15715;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=CCO47_RS15715;old_locus_tag=CCO47_15715 NZ_CP075113.1 Protein Homology CDS 3189956 3190642 . - 0 ID=cds-WP_000167219.1;Parent=gene-CCO47_RS15715;Dbxref=GenBank:WP_000167219.1;Name=WP_000167219.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459775.1;locus_tag=CCO47_RS15715;product=dethiobiotin synthase;protein_id=WP_000167219.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3190635 3191390 . - . ID=gene-CCO47_RS15720;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=CCO47_RS15720;old_locus_tag=CCO47_15720 NZ_CP075113.1 Protein Homology CDS 3190635 3191390 . - 0 ID=cds-WP_000079917.1;Parent=gene-CCO47_RS15720;Dbxref=GenBank:WP_000079917.1;Name=WP_000079917.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459774.1;locus_tag=CCO47_RS15720;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_000079917.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3191374 3192531 . - . ID=gene-CCO47_RS15725;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=CCO47_RS15725;old_locus_tag=CCO47_15725 NZ_CP075113.1 Protein Homology CDS 3191374 3192531 . - 0 ID=cds-WP_000118940.1;Parent=gene-CCO47_RS15725;Dbxref=GenBank:WP_000118940.1;Name=WP_000118940.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459773.1;locus_tag=CCO47_RS15725;product=8-amino-7-oxononanoate synthase;protein_id=WP_000118940.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3192528 3193568 . - . ID=gene-CCO47_RS15730;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=CCO47_RS15730;old_locus_tag=CCO47_15730 NZ_CP075113.1 Protein Homology CDS 3192528 3193568 . - 0 ID=cds-WP_000090727.1;Parent=gene-CCO47_RS15730;Dbxref=GenBank:WP_000090727.1;Name=WP_000090727.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459772.1;locus_tag=CCO47_RS15730;product=biotin synthase BioB;protein_id=WP_000090727.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3193655 3194953 . + . ID=gene-CCO47_RS15735;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=CCO47_RS15735;old_locus_tag=CCO47_15735 NZ_CP075113.1 Protein Homology CDS 3193655 3194953 . + 0 ID=cds-WP_000205516.1;Parent=gene-CCO47_RS15735;Dbxref=GenBank:WP_000205516.1;Name=WP_000205516.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000205516.1;locus_tag=CCO47_RS15735;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_000205516.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3195001 3195477 . + . ID=gene-CCO47_RS15740;Name=CCO47_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15740;old_locus_tag=CCO47_15740 NZ_CP075113.1 Protein Homology CDS 3195001 3195477 . + 0 ID=cds-WP_000767403.1;Parent=gene-CCO47_RS15740;Dbxref=GenBank:WP_000767403.1;Name=WP_000767403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459770.1;locus_tag=CCO47_RS15740;product=kinase inhibitor;protein_id=WP_000767403.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3195562 3197082 . - . ID=gene-CCO47_RS15745;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=CCO47_RS15745;old_locus_tag=CCO47_15745 NZ_CP075113.1 Protein Homology CDS 3195562 3197082 . - 0 ID=cds-WP_094912330.1;Parent=gene-CCO47_RS15745;Dbxref=GenBank:WP_094912330.1;Name=WP_094912330.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=CCO47_RS15745;product=histidine ammonia-lyase;protein_id=WP_094912330.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3197084 3198769 . - . ID=gene-CCO47_RS15750;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=CCO47_RS15750;old_locus_tag=CCO47_15750 NZ_CP075113.1 Protein Homology CDS 3197084 3198769 . - 0 ID=cds-WP_001115193.1;Parent=gene-CCO47_RS15750;Dbxref=GenBank:WP_001115193.1;Name=WP_001115193.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441920.1;locus_tag=CCO47_RS15750;product=urocanate hydratase;protein_id=WP_001115193.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3198966 3199691 . - . ID=gene-CCO47_RS15755;Name=CCO47_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15755;old_locus_tag=CCO47_15755 NZ_CP075113.1 Protein Homology CDS 3198966 3199691 . - 0 ID=cds-WP_000287413.1;Parent=gene-CCO47_RS15755;Dbxref=GenBank:WP_000287413.1;Name=WP_000287413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459768.1;locus_tag=CCO47_RS15755;product=histidine utilization repressor;protein_id=WP_000287413.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3199736 3200677 . - . ID=gene-CCO47_RS15760;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=CCO47_RS15760;old_locus_tag=CCO47_15760 NZ_CP075113.1 Protein Homology CDS 3199736 3200677 . - 0 ID=cds-WP_000195683.1;Parent=gene-CCO47_RS15760;Dbxref=GenBank:WP_000195683.1;Name=WP_000195683.1;Ontology_term=GO:0006548,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459767.1;locus_tag=CCO47_RS15760;product=formimidoylglutamase;protein_id=WP_000195683.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3200674 3201897 . - . ID=gene-CCO47_RS15765;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=CCO47_RS15765;old_locus_tag=CCO47_15765 NZ_CP075113.1 Protein Homology CDS 3200674 3201897 . - 0 ID=cds-WP_001249485.1;Parent=gene-CCO47_RS15765;Dbxref=GenBank:WP_001249485.1;Name=WP_001249485.1;Ontology_term=GO:0006548,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459766.1;locus_tag=CCO47_RS15765;product=imidazolonepropionase;protein_id=WP_001249485.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3202135 3203418 . + . ID=gene-CCO47_RS15770;Name=CCO47_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15770;old_locus_tag=CCO47_15770 NZ_CP075113.1 Protein Homology CDS 3202135 3203418 . + 0 ID=cds-WP_001094769.1;Parent=gene-CCO47_RS15770;Dbxref=GenBank:WP_001094769.1;Name=WP_001094769.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=CCO47_RS15770;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001094769.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3203562 3204557 . - . ID=gene-CCO47_RS15775;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;gene_synonym=ybhE;locus_tag=CCO47_RS15775;old_locus_tag=CCO47_15775 NZ_CP075113.1 Protein Homology CDS 3203562 3204557 . - 0 ID=cds-WP_000815468.1;Parent=gene-CCO47_RS15775;Dbxref=GenBank:WP_000815468.1;Name=WP_000815468.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=CCO47_RS15775;product=6-phosphogluconolactonase;protein_id=WP_000815468.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3204721 3205539 . + . ID=gene-CCO47_RS15780;Name=CCO47_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15780;old_locus_tag=CCO47_15780 NZ_CP075113.1 Protein Homology CDS 3204721 3205539 . + 0 ID=cds-WP_000127031.1;Parent=gene-CCO47_RS15780;Dbxref=GenBank:WP_000127031.1;Name=WP_000127031.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=CCO47_RS15780;product=pyridoxal phosphatase;protein_id=WP_000127031.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3205540 3206598 . - . ID=gene-CCO47_RS15785;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=CCO47_RS15785;old_locus_tag=CCO47_15785 NZ_CP075113.1 Protein Homology CDS 3205540 3206598 . - 0 ID=cds-WP_000891710.1;Parent=gene-CCO47_RS15785;Dbxref=GenBank:WP_000891710.1;Name=WP_000891710.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=CCO47_RS15785;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_000891710.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3206601 3207290 . - . ID=gene-CCO47_RS15790;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=CCO47_RS15790;old_locus_tag=CCO47_15790 NZ_CP075113.1 Protein Homology CDS 3206601 3207290 . - 0 ID=cds-WP_000604026.1;Parent=gene-CCO47_RS15790;Dbxref=GenBank:WP_000604026.1;Name=WP_000604026.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459761.1;locus_tag=CCO47_RS15790;product=molybdate ABC transporter permease subunit;protein_id=WP_000604026.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3207290 3208063 . - . ID=gene-CCO47_RS15795;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=CCO47_RS15795;old_locus_tag=CCO47_15795 NZ_CP075113.1 Protein Homology CDS 3207290 3208063 . - 0 ID=cds-WP_000951416.1;Parent=gene-CCO47_RS15795;Dbxref=GenBank:WP_000951416.1;Name=WP_000951416.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459760.1;locus_tag=CCO47_RS15795;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_000951416.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3208230 3208379 . - . ID=gene-CCO47_RS15800;Name=CCO47_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15800;old_locus_tag=CCO47_15800 NZ_CP075113.1 Protein Homology CDS 3208230 3208379 . - 0 ID=cds-WP_000891513.1;Parent=gene-CCO47_RS15800;Dbxref=GenBank:WP_000891513.1;Name=WP_000891513.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459759.1;locus_tag=CCO47_RS15800;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_000891513.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3208508 3209296 . + . ID=gene-CCO47_RS15805;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=CCO47_RS15805;old_locus_tag=CCO47_15805 NZ_CP075113.1 Protein Homology CDS 3208508 3209296 . + 0 ID=cds-WP_001147412.1;Parent=gene-CCO47_RS15805;Dbxref=GenBank:WP_001147412.1;Name=WP_001147412.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459758.1;locus_tag=CCO47_RS15805;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147412.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3209364 3210839 . + . ID=gene-CCO47_RS15810;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=CCO47_RS15810;old_locus_tag=CCO47_15810 NZ_CP075113.1 Protein Homology CDS 3209364 3210839 . + 0 ID=cds-WP_000096940.1;Parent=gene-CCO47_RS15810;Dbxref=GenBank:WP_000096940.1;Name=WP_000096940.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459757.1;locus_tag=CCO47_RS15810;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_000096940.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3211010 3211918 . + . ID=gene-CCO47_RS15815;Name=CCO47_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15815;old_locus_tag=CCO47_15815 NZ_CP075113.1 Protein Homology CDS 3211010 3211918 . + 0 ID=cds-WP_000885531.1;Parent=gene-CCO47_RS15815;Dbxref=GenBank:WP_000885531.1;Name=WP_000885531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459756.1;locus_tag=CCO47_RS15815;product=DUF2167 domain-containing protein;protein_id=WP_000885531.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3212141 3213157 . + . ID=gene-CCO47_RS15820;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=CCO47_RS15820;old_locus_tag=CCO47_15820 NZ_CP075113.1 Protein Homology CDS 3212141 3213157 . + 0 ID=cds-WP_001265465.1;Parent=gene-CCO47_RS15820;Dbxref=GenBank:WP_001265465.1;Name=WP_001265465.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459755.1;locus_tag=CCO47_RS15820;product=UDP-glucose 4-epimerase GalE;protein_id=WP_001265465.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3213168 3214214 . + . ID=gene-CCO47_RS15825;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=CCO47_RS15825;old_locus_tag=CCO47_15825 NZ_CP075113.1 Protein Homology CDS 3213168 3214214 . + 0 ID=cds-WP_000187473.1;Parent=gene-CCO47_RS15825;Dbxref=GenBank:WP_000187473.1;Name=WP_000187473.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459754.1;locus_tag=CCO47_RS15825;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_000187473.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3214217 3215365 . + . ID=gene-CCO47_RS15830;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=CCO47_RS15830;old_locus_tag=CCO47_15830 NZ_CP075113.1 Protein Homology CDS 3214217 3215365 . + 0 ID=cds-WP_001049364.1;Parent=gene-CCO47_RS15830;Dbxref=GenBank:WP_001049364.1;Name=WP_001049364.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=CCO47_RS15830;product=galactokinase;protein_id=WP_001049364.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3215359 3216399 . + . ID=gene-CCO47_RS15835;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=CCO47_RS15835;old_locus_tag=CCO47_15835 NZ_CP075113.1 Protein Homology CDS 3215359 3216399 . + 0 ID=cds-WP_000931426.1;Parent=gene-CCO47_RS15835;Dbxref=GenBank:WP_000931426.1;Name=WP_000931426.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459752.1;locus_tag=CCO47_RS15835;product=galactose-1-epimerase;protein_id=WP_000931426.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3216623 3217375 . + . ID=gene-CCO47_RS15840;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=CCO47_RS15840;old_locus_tag=CCO47_15840 NZ_CP075113.1 Protein Homology CDS 3216623 3217375 . + 0 ID=cds-WP_000301552.1;Parent=gene-CCO47_RS15840;Dbxref=GenBank:WP_000301552.1;Name=WP_000301552.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=CCO47_RS15840;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_000301552.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3217466 3218242 . - . ID=gene-CCO47_RS15845;Name=CCO47_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15845;old_locus_tag=CCO47_15845 NZ_CP075113.1 Protein Homology CDS 3217466 3218242 . - 0 ID=cds-WP_001214704.1;Parent=gene-CCO47_RS15845;Dbxref=GenBank:WP_001214704.1;Name=WP_001214704.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459750.1;locus_tag=CCO47_RS15845;product=ABC transporter ATP-binding protein;protein_id=WP_001214704.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3218242 3219321 . - . ID=gene-CCO47_RS15850;Name=CCO47_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15850;old_locus_tag=CCO47_15850 NZ_CP075113.1 Protein Homology CDS 3218242 3219321 . - 0 ID=cds-WP_000128331.1;Parent=gene-CCO47_RS15850;Dbxref=GenBank:WP_000128331.1;Name=WP_000128331.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459749.1;locus_tag=CCO47_RS15850;product=FecCD family ABC transporter permease;protein_id=WP_000128331.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3219701 3220399 . - . ID=gene-CCO47_RS15855;Name=CCO47_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15855;old_locus_tag=CCO47_15855 NZ_CP075113.1 Protein Homology CDS 3219701 3220399 . - 0 ID=cds-WP_001005987.1;Parent=gene-CCO47_RS15855;Dbxref=GenBank:WP_001005987.1;Name=WP_001005987.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459748.1;locus_tag=CCO47_RS15855;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_001005987.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3220518 3221819 . - . ID=gene-CCO47_RS15860;Name=CCO47_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15860;old_locus_tag=CCO47_15860 NZ_CP075113.1 Protein Homology CDS 3220518 3221819 . - 0 ID=cds-WP_000444846.1;Parent=gene-CCO47_RS15860;Dbxref=GenBank:WP_000444846.1;Name=WP_000444846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=CCO47_RS15860;product=oxalacetate decarboxylase subunit beta;protein_id=WP_000444846.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3221832 3223604 . - . ID=gene-CCO47_RS15865;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=CCO47_RS15865;old_locus_tag=CCO47_15865 NZ_CP075113.1 Protein Homology CDS 3221832 3223604 . - 0 ID=cds-WP_000150443.1;Parent=gene-CCO47_RS15865;Dbxref=GenBank:WP_000150443.1;Name=WP_000150443.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=CCO47_RS15865;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_000150443.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3223620 3223868 . - . ID=gene-CCO47_RS15870;Name=CCO47_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15870;old_locus_tag=CCO47_15870 NZ_CP075113.1 Protein Homology CDS 3223620 3223868 . - 0 ID=cds-WP_001089085.1;Parent=gene-CCO47_RS15870;Dbxref=GenBank:WP_001089085.1;Name=WP_001089085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459746.1;locus_tag=CCO47_RS15870;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_001089085.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3223918 3225186 . - . ID=gene-CCO47_RS15875;Name=CCO47_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15875;old_locus_tag=CCO47_15875 NZ_CP075113.1 Protein Homology CDS 3223918 3225186 . - 0 ID=cds-WP_000074128.1;Parent=gene-CCO47_RS15875;Dbxref=GenBank:WP_000074128.1;Name=WP_000074128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074132.1;locus_tag=CCO47_RS15875;product=SLC13 family permease;protein_id=WP_000074128.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3225409 3226392 . + . ID=gene-CCO47_RS15880;Name=CCO47_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15880;old_locus_tag=CCO47_15880 NZ_CP075113.1 Protein Homology CDS 3225409 3226392 . + 0 ID=cds-WP_000282117.1;Parent=gene-CCO47_RS15880;Dbxref=GenBank:WP_000282117.1;Name=WP_000282117.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459744.1;locus_tag=CCO47_RS15880;product=LysR family transcriptional regulator;protein_id=WP_000282117.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3226393 3227283 . - . ID=gene-CCO47_RS15885;Name=CCO47_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15885;old_locus_tag=CCO47_15885 NZ_CP075113.1 Protein Homology CDS 3226393 3227283 . - 0 ID=cds-WP_000405927.1;Parent=gene-CCO47_RS15885;Dbxref=GenBank:WP_000405927.1;Name=WP_000405927.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539513.1;locus_tag=CCO47_RS15885;product=LysR family transcriptional regulator;protein_id=WP_000405927.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3227413 3228258 . + . ID=gene-CCO47_RS15890;Name=CCO47_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15890;old_locus_tag=CCO47_15890 NZ_CP075113.1 Protein Homology CDS 3227413 3228258 . + 0 ID=cds-WP_000086834.1;Parent=gene-CCO47_RS15890;Dbxref=GenBank:WP_000086834.1;Name=WP_000086834.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459742.1;locus_tag=CCO47_RS15890;product=fumarate hydratase;protein_id=WP_000086834.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3228273 3228818 . + . ID=gene-CCO47_RS15895;Name=CCO47_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15895;old_locus_tag=CCO47_15895 NZ_CP075113.1 Protein Homology CDS 3228273 3228818 . + 0 ID=cds-WP_000970374.1;Parent=gene-CCO47_RS15895;Dbxref=GenBank:WP_000970374.1;Name=WP_000970374.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459741.1;locus_tag=CCO47_RS15895;product=FumA C-terminus/TtdB family hydratase beta subunit;protein_id=WP_000970374.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3228912 3229964 . - . ID=gene-CCO47_RS15900;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=CCO47_RS15900;old_locus_tag=CCO47_15900 NZ_CP075113.1 Protein Homology CDS 3228912 3229964 . - 0 ID=cds-WP_001109233.1;Parent=gene-CCO47_RS15900;Dbxref=GenBank:WP_001109233.1;Name=WP_001109233.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=CCO47_RS15900;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_001109233.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3230283 3230669 . + . ID=gene-CCO47_RS15905;Name=CCO47_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS15905;old_locus_tag=CCO47_15905 NZ_CP075113.1 Protein Homology CDS 3230283 3230669 . + 0 ID=cds-WP_000784385.1;Parent=gene-CCO47_RS15905;Dbxref=GenBank:WP_000784385.1;Name=WP_000784385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459739.1;locus_tag=CCO47_RS15905;product=YbgS-like family protein;protein_id=WP_000784385.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3230780 3231718 . + . ID=gene-CCO47_RS15910;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=CCO47_RS15910;old_locus_tag=CCO47_15910 NZ_CP075113.1 Protein Homology CDS 3230780 3231718 . + 0 ID=cds-WP_000951250.1;Parent=gene-CCO47_RS15910;Dbxref=GenBank:WP_000951250.1;Name=WP_000951250.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459738.1;locus_tag=CCO47_RS15910;product=CDF family zinc transporter ZitB;protein_id=WP_000951250.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3231715 3232434 . - . ID=gene-CCO47_RS15915;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=CCO47_RS15915;old_locus_tag=CCO47_15915 NZ_CP075113.1 Protein Homology CDS 3231715 3232434 . - 0 ID=cds-WP_000345361.1;Parent=gene-CCO47_RS15915;Dbxref=GenBank:WP_000345361.1;Name=WP_000345361.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459737.1;locus_tag=CCO47_RS15915;product=nicotinamide riboside transporter PnuC;protein_id=WP_000345361.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3232459 3233502 . - . ID=gene-CCO47_RS15920;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=CCO47_RS15920;old_locus_tag=CCO47_15920 NZ_CP075113.1 Protein Homology CDS 3232459 3233502 . - 0 ID=cds-WP_000115339.1;Parent=gene-CCO47_RS15920;Dbxref=GenBank:WP_000115339.1;Name=WP_000115339.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=CCO47_RS15920;product=quinolinate synthase NadA;protein_id=WP_000115339.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3233797 3233872 . - . ID=gene-CCO47_RS15925;Name=CCO47_RS15925;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS15925;old_locus_tag=CCO47_15925 NZ_CP075113.1 tRNAscan-SE tRNA 3233797 3233872 . - . ID=rna-CCO47_RS15925;Parent=gene-CCO47_RS15925;anticodon=(pos:complement(3233837..3233839));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS15925;product=tRNA-Lys NZ_CP075113.1 tRNAscan-SE exon 3233797 3233872 . - . ID=exon-CCO47_RS15925-1;Parent=rna-CCO47_RS15925;anticodon=(pos:complement(3233837..3233839));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS15925;product=tRNA-Lys NZ_CP075113.1 RefSeq gene 3234012 3234087 . - . ID=gene-CCO47_RS15930;Name=CCO47_RS15930;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS15930;old_locus_tag=CCO47_15930 NZ_CP075113.1 tRNAscan-SE tRNA 3234012 3234087 . - . ID=rna-CCO47_RS15930;Parent=gene-CCO47_RS15930;anticodon=(pos:complement(3234052..3234054));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS15930;product=tRNA-Lys NZ_CP075113.1 tRNAscan-SE exon 3234012 3234087 . - . ID=exon-CCO47_RS15930-1;Parent=rna-CCO47_RS15930;anticodon=(pos:complement(3234052..3234054));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS15930;product=tRNA-Lys NZ_CP075113.1 RefSeq gene 3234091 3234166 . - . ID=gene-CCO47_RS15935;Name=CCO47_RS15935;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS15935;old_locus_tag=CCO47_15935 NZ_CP075113.1 tRNAscan-SE tRNA 3234091 3234166 . - . ID=rna-CCO47_RS15935;Parent=gene-CCO47_RS15935;anticodon=(pos:complement(3234131..3234133));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS15935;product=tRNA-Val NZ_CP075113.1 tRNAscan-SE exon 3234091 3234166 . - . ID=exon-CCO47_RS15935-1;Parent=rna-CCO47_RS15935;anticodon=(pos:complement(3234131..3234133));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS15935;product=tRNA-Val NZ_CP075113.1 RefSeq gene 3234303 3234378 . - . ID=gene-CCO47_RS15940;Name=CCO47_RS15940;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS15940;old_locus_tag=CCO47_15940 NZ_CP075113.1 tRNAscan-SE tRNA 3234303 3234378 . - . ID=rna-CCO47_RS15940;Parent=gene-CCO47_RS15940;anticodon=(pos:complement(3234343..3234345));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS15940;product=tRNA-Lys NZ_CP075113.1 tRNAscan-SE exon 3234303 3234378 . - . ID=exon-CCO47_RS15940-1;Parent=rna-CCO47_RS15940;anticodon=(pos:complement(3234343..3234345));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS15940;product=tRNA-Lys NZ_CP075113.1 RefSeq gene 3234543 3235331 . - . ID=gene-CCO47_RS15945;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=CCO47_RS15945;old_locus_tag=CCO47_15945 NZ_CP075113.1 Protein Homology CDS 3234543 3235331 . - 0 ID=cds-WP_000097553.1;Parent=gene-CCO47_RS15945;Dbxref=GenBank:WP_000097553.1;Name=WP_000097553.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459735.1;locus_tag=CCO47_RS15945;product=cell division protein CpoB;protein_id=WP_000097553.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3235341 3235865 . - . ID=gene-CCO47_RS15950;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=CCO47_RS15950;old_locus_tag=CCO47_15950 NZ_CP075113.1 Protein Homology CDS 3235341 3235865 . - 0 ID=cds-WP_001176621.1;Parent=gene-CCO47_RS15950;Dbxref=GenBank:WP_001176621.1;Name=WP_001176621.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459734.1;locus_tag=CCO47_RS15950;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001176621.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3235900 3237192 . - . ID=gene-CCO47_RS15955;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=CCO47_RS15955;old_locus_tag=CCO47_15955 NZ_CP075113.1 Protein Homology CDS 3235900 3237192 . - 0 ID=cds-WP_094912363.1;Parent=gene-CCO47_RS15955;Dbxref=GenBank:WP_094912363.1;Name=WP_094912363.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=CCO47_RS15955;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_094912363.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3237316 3238449 . - . ID=gene-CCO47_RS15960;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=CCO47_RS15960;old_locus_tag=CCO47_15960 NZ_CP075113.1 Protein Homology CDS 3237316 3238449 . - 0 ID=cds-WP_001700942.1;Parent=gene-CCO47_RS15960;Dbxref=GenBank:WP_001700942.1;Name=WP_001700942.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=CCO47_RS15960;product=cell envelope integrity protein TolA;protein_id=WP_001700942.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3238514 3238942 . - . ID=gene-CCO47_RS15965;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=CCO47_RS15965;old_locus_tag=CCO47_15965 NZ_CP075113.1 Protein Homology CDS 3238514 3238942 . - 0 ID=cds-WP_000124676.1;Parent=gene-CCO47_RS15965;Dbxref=GenBank:WP_000124676.1;Name=WP_000124676.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=CCO47_RS15965;product=colicin uptake protein TolR;protein_id=WP_000124676.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3238946 3239638 . - . ID=gene-CCO47_RS15970;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=CCO47_RS15970;old_locus_tag=CCO47_15970 NZ_CP075113.1 Protein Homology CDS 3238946 3239638 . - 0 ID=cds-WP_000131318.1;Parent=gene-CCO47_RS15970;Dbxref=GenBank:WP_000131318.1;Name=WP_000131318.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459730.1;locus_tag=CCO47_RS15970;product=Tol-Pal system protein TolQ;protein_id=WP_000131318.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3239635 3240039 . - . ID=gene-CCO47_RS15975;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=CCO47_RS15975;old_locus_tag=CCO47_15975 NZ_CP075113.1 Protein Homology CDS 3239635 3240039 . - 0 ID=cds-WP_001046240.1;Parent=gene-CCO47_RS15975;Dbxref=GenBank:WP_001046240.1;Name=WP_001046240.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459729.1;locus_tag=CCO47_RS15975;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001046240.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3240268 3240561 . - . ID=gene-CCO47_RS15980;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=CCO47_RS15980;old_locus_tag=CCO47_15980 NZ_CP075113.1 Protein Homology CDS 3240268 3240561 . - 0 ID=cds-WP_000148790.1;Parent=gene-CCO47_RS15980;Dbxref=GenBank:WP_000148790.1;Name=WP_000148790.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006712473.1;locus_tag=CCO47_RS15980;product=cyd operon protein YbgE;protein_id=WP_000148790.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3240561 3240674 . - . ID=gene-CCO47_RS15985;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;gene_synonym=ybgT;locus_tag=CCO47_RS15985;old_locus_tag=CCO47_15985 NZ_CP075113.1 Protein Homology CDS 3240561 3240674 . - 0 ID=cds-WP_000270278.1;Parent=gene-CCO47_RS15985;Dbxref=GenBank:WP_000270278.1;Name=WP_000270278.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459727.1;locus_tag=CCO47_RS15985;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270278.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3240689 3241828 . - . ID=gene-CCO47_RS15990;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=CCO47_RS15990;old_locus_tag=CCO47_15990 NZ_CP075113.1 Protein Homology CDS 3240689 3241828 . - 0 ID=cds-WP_000568258.1;Parent=gene-CCO47_RS15990;Dbxref=GenBank:WP_000568258.1;Name=WP_000568258.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=CCO47_RS15990;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000568258.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3241844 3243412 . - . ID=gene-CCO47_RS15995;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=CCO47_RS15995;old_locus_tag=CCO47_15995 NZ_CP075113.1 Protein Homology CDS 3241844 3243412 . - 0 ID=cds-WP_000884369.1;Parent=gene-CCO47_RS15995;Dbxref=GenBank:WP_000884369.1;Name=WP_000884369.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459725.1;locus_tag=CCO47_RS15995;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000884369.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3244995 3245864 . - . ID=gene-CCO47_RS16000;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=CCO47_RS16000;old_locus_tag=CCO47_16000 NZ_CP075113.1 Protein Homology CDS 3244995 3245864 . - 0 ID=cds-WP_000114635.1;Parent=gene-CCO47_RS16000;Dbxref=GenBank:WP_000114635.1;Name=WP_000114635.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=CCO47_RS16000;product=succinate--CoA ligase subunit alpha;protein_id=WP_000114635.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3245864 3247030 . - . ID=gene-CCO47_RS16005;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=CCO47_RS16005;old_locus_tag=CCO47_16005 NZ_CP075113.1 Protein Homology CDS 3245864 3247030 . - 0 ID=cds-WP_001048588.1;Parent=gene-CCO47_RS16005;Dbxref=GenBank:WP_001048588.1;Name=WP_001048588.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=CCO47_RS16005;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_001048588.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3247172 3248380 . - . ID=gene-CCO47_RS16010;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=CCO47_RS16010;old_locus_tag=CCO47_16010 NZ_CP075113.1 Protein Homology CDS 3247172 3248380 . - 0 ID=cds-WP_000099858.1;Parent=gene-CCO47_RS16010;Dbxref=GenBank:WP_000099858.1;Name=WP_000099858.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459722.1;locus_tag=CCO47_RS16010;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_000099858.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3248395 3251196 . - . ID=gene-CCO47_RS16015;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=CCO47_RS16015;old_locus_tag=CCO47_16015 NZ_CP075113.1 Protein Homology CDS 3248395 3251196 . - 0 ID=cds-WP_001181500.1;Parent=gene-CCO47_RS16015;Dbxref=GenBank:WP_001181500.1;Name=WP_001181500.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459721.1;locus_tag=CCO47_RS16015;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181500.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3251722 3252438 . - . ID=gene-CCO47_RS16020;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=CCO47_RS16020;old_locus_tag=CCO47_16020 NZ_CP075113.1 Protein Homology CDS 3251722 3252438 . - 0 ID=cds-WP_001537859.1;Parent=gene-CCO47_RS16020;Dbxref=GenBank:WP_001537859.1;Name=WP_001537859.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=CCO47_RS16020;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001537859.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3252455 3254221 . - . ID=gene-CCO47_RS16025;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=CCO47_RS16025;old_locus_tag=CCO47_16025 NZ_CP075113.1 Protein Homology CDS 3252455 3254221 . - 0 ID=cds-WP_000775561.1;Parent=gene-CCO47_RS16025;Dbxref=GenBank:WP_000775561.1;Name=WP_000775561.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=CCO47_RS16025;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775561.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3254221 3254568 . - . ID=gene-CCO47_RS16030;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=CCO47_RS16030;old_locus_tag=CCO47_16030 NZ_CP075113.1 Protein Homology CDS 3254221 3254568 . - 0 ID=cds-WP_000254356.1;Parent=gene-CCO47_RS16030;Dbxref=GenBank:WP_000254356.1;Name=WP_000254356.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=CCO47_RS16030;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254356.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3254562 3254966 . - . ID=gene-CCO47_RS16035;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=CCO47_RS16035;old_locus_tag=CCO47_16035 NZ_CP075113.1 Protein Homology CDS 3254562 3254966 . - 0 ID=cds-WP_000263340.1;Parent=gene-CCO47_RS16035;Dbxref=GenBank:WP_000263340.1;Name=WP_000263340.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=CCO47_RS16035;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263340.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3255349 3255480 . + . ID=gene-CCO47_RS24575;Name=CCO47_RS24575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24575 NZ_CP075113.1 Protein Homology CDS 3255349 3255480 . + 0 ID=cds-WP_418142699.1;Parent=gene-CCO47_RS24575;Dbxref=GenBank:WP_418142699.1;Name=WP_418142699.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049035.2;locus_tag=CCO47_RS24575;product=hypothetical protein;protein_id=WP_418142699.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3255706 3256989 . + . ID=gene-CCO47_RS16045;Name=CCO47_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16045;old_locus_tag=CCO47_16045 NZ_CP075113.1 Protein Homology CDS 3255706 3256989 . + 0 ID=cds-WP_000785811.1;Parent=gene-CCO47_RS16045;Dbxref=GenBank:WP_000785811.1;Name=WP_000785811.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459715.1;locus_tag=CCO47_RS16045;product=citrate synthase;protein_id=WP_000785811.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3257126 3258172 . + . ID=gene-CCO47_RS16050;Name=CCO47_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16050;old_locus_tag=CCO47_16050 NZ_CP075113.1 Protein Homology CDS 3257126 3258172 . + 0 ID=cds-WP_001122036.1;Parent=gene-CCO47_RS16050;Dbxref=GenBank:WP_001122036.1;Name=WP_001122036.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459714.1;locus_tag=CCO47_RS16050;product=AbrB family transcriptional regulator;protein_id=WP_001122036.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3258227 3259018 . - . ID=gene-CCO47_RS16055;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=CCO47_RS16055;old_locus_tag=CCO47_16055 NZ_CP075113.1 Protein Homology CDS 3258227 3259018 . - 0 ID=cds-WP_001113972.1;Parent=gene-CCO47_RS16055;Dbxref=GenBank:WP_001113972.1;Name=WP_001113972.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459713.1;locus_tag=CCO47_RS16055;product=endonuclease VIII;protein_id=WP_001113972.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3259140 3259874 . - . ID=gene-CCO47_RS16060;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=CCO47_RS16060;old_locus_tag=CCO47_16060 NZ_CP075113.1 Protein Homology CDS 3259140 3259874 . - 0 ID=cds-WP_001017925.1;Parent=gene-CCO47_RS16060;Dbxref=GenBank:WP_001017925.1;Name=WP_001017925.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459699.1;locus_tag=CCO47_RS16060;product=5-oxoprolinase subunit PxpA;protein_id=WP_001017925.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3259864 3260796 . - . ID=gene-CCO47_RS16065;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=CCO47_RS16065;old_locus_tag=CCO47_16065 NZ_CP075113.1 Protein Homology CDS 3259864 3260796 . - 0 ID=cds-WP_000932042.1;Parent=gene-CCO47_RS16065;Dbxref=GenBank:WP_000932042.1;Name=WP_000932042.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpC;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459698.1;locus_tag=CCO47_RS16065;product=5-oxoprolinase subunit PxpC;protein_id=WP_000932042.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3260790 3261446 . - . ID=gene-CCO47_RS16070;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=CCO47_RS16070;old_locus_tag=CCO47_16070 NZ_CP075113.1 Protein Homology CDS 3260790 3261446 . - 0 ID=cds-WP_001188371.1;Parent=gene-CCO47_RS16070;Dbxref=GenBank:WP_001188371.1;Name=WP_001188371.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=CCO47_RS16070;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188371.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3261462 3262205 . - . ID=gene-CCO47_RS16075;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=CCO47_RS16075;old_locus_tag=CCO47_16075 NZ_CP075113.1 Protein Homology CDS 3261462 3262205 . - 0 ID=cds-WP_000798844.1;Parent=gene-CCO47_RS16075;Dbxref=GenBank:WP_000798844.1;Name=WP_000798844.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=CCO47_RS16075;product=radiation resistance protein YbgI;protein_id=WP_000798844.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3262534 3264015 . + . ID=gene-CCO47_RS16080;Name=CCO47_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16080;old_locus_tag=CCO47_16080 NZ_CP075113.1 Protein Homology CDS 3262534 3264015 . + 0 ID=cds-WP_001041123.1;Parent=gene-CCO47_RS16080;Dbxref=GenBank:WP_001041123.1;Name=WP_001041123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459695.1;locus_tag=CCO47_RS16080;product=MFS transporter;protein_id=WP_001041123.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3264054 3265475 . - . ID=gene-CCO47_RS16085;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=CCO47_RS16085;old_locus_tag=CCO47_16085 NZ_CP075113.1 Protein Homology CDS 3264054 3265475 . - 0 ID=cds-WP_001142033.1;Parent=gene-CCO47_RS16085;Dbxref=GenBank:WP_001142033.1;Name=WP_001142033.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459694.1;locus_tag=CCO47_RS16085;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_001142033.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3265587 3265793 . - . ID=gene-CCO47_RS16090;Name=CCO47_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16090;old_locus_tag=CCO47_16090 NZ_CP075113.1 Protein Homology CDS 3265587 3265793 . - 0 ID=cds-WP_000401435.1;Parent=gene-CCO47_RS16090;Dbxref=GenBank:WP_000401435.1;Name=WP_000401435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459693.1;locus_tag=CCO47_RS16090;product=YbfA family protein;protein_id=WP_000401435.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3266130 3266219 . + . ID=gene-CCO47_RS16095;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=CCO47_RS16095;old_locus_tag=CCO47_16095 NZ_CP075113.1 Protein Homology CDS 3266130 3266219 . + 0 ID=cds-WP_001670793.1;Parent=gene-CCO47_RS16095;Dbxref=GenBank:WP_001670793.1;Name=WP_001670793.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=CCO47_RS16095;product=K(+)-transporting ATPase subunit F;protein_id=WP_001670793.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3266219 3267898 . + . ID=gene-CCO47_RS16100;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=CCO47_RS16100;old_locus_tag=CCO47_16100 NZ_CP075113.1 Protein Homology CDS 3266219 3267898 . + 0 ID=cds-WP_000730072.1;Parent=gene-CCO47_RS16100;Dbxref=GenBank:WP_000730072.1;Name=WP_000730072.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459691.1;locus_tag=CCO47_RS16100;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_000730072.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3267919 3269967 . + . ID=gene-CCO47_RS16105;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=CCO47_RS16105;old_locus_tag=CCO47_16105 NZ_CP075113.1 Protein Homology CDS 3267919 3269967 . + 0 ID=cds-WP_000088025.1;Parent=gene-CCO47_RS16105;Dbxref=GenBank:WP_000088025.1;Name=WP_000088025.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459690.1;locus_tag=CCO47_RS16105;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_000088025.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3269976 3270560 . + . ID=gene-CCO47_RS16110;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=CCO47_RS16110;old_locus_tag=CCO47_16110 NZ_CP075113.1 Protein Homology CDS 3269976 3270560 . + 0 ID=cds-WP_001518103.1;Parent=gene-CCO47_RS16110;Dbxref=GenBank:WP_001518103.1;Name=WP_001518103.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=CCO47_RS16110;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_001518103.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3270557 3273241 . + . ID=gene-CCO47_RS16115;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=CCO47_RS16115;old_locus_tag=CCO47_16115 NZ_CP075113.1 Protein Homology CDS 3270557 3273241 . + 0 ID=cds-WP_000997469.1;Parent=gene-CCO47_RS16115;Dbxref=GenBank:WP_000997469.1;Name=WP_000997469.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459688.1;locus_tag=CCO47_RS16115;product=two-component system sensor histidine kinase KdpD;protein_id=WP_000997469.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3273238 3273915 . + . ID=gene-CCO47_RS16120;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=CCO47_RS16120;old_locus_tag=CCO47_16120 NZ_CP075113.1 Protein Homology CDS 3273238 3273915 . + 0 ID=cds-WP_000186059.1;Parent=gene-CCO47_RS16120;Dbxref=GenBank:WP_000186059.1;Name=WP_000186059.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=CCO47_RS16120;product=two-component system response regulator KdpE;protein_id=WP_000186059.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3274193 3274298 . + . ID=gene-CCO47_RS16125;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=pseudogene;locus_tag=CCO47_RS16125;old_locus_tag=CCO47_16125;pseudo=true NZ_CP075113.1 Protein Homology CDS 3274193 3274298 . + 0 ID=cds-CCO47_RS16125;Parent=gene-CCO47_RS16125;Note=frameshifted;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=CCO47_RS16125;product=leader peptide SpeFL;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3274678 3276876 . + . ID=gene-CCO47_RS16130;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=CCO47_RS16130;old_locus_tag=CCO47_16130 NZ_CP075113.1 Protein Homology CDS 3274678 3276876 . + 0 ID=cds-WP_001292402.1;Parent=gene-CCO47_RS16130;Dbxref=GenBank:WP_001292402.1;Name=WP_001292402.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=CCO47_RS16130;product=ornithine decarboxylase SpeF;protein_id=WP_001292402.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3276873 3278192 . + . ID=gene-CCO47_RS16135;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=CCO47_RS16135;old_locus_tag=CCO47_16135 NZ_CP075113.1 Protein Homology CDS 3276873 3278192 . + 0 ID=cds-WP_000042658.1;Parent=gene-CCO47_RS16135;Dbxref=GenBank:WP_000042658.1;Name=WP_000042658.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=CCO47_RS16135;product=putrescine-ornithine antiporter;protein_id=WP_000042658.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3278257 3278742 . + . ID=gene-CCO47_RS16140;Name=CCO47_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16140;old_locus_tag=CCO47_16140 NZ_CP075113.1 Protein Homology CDS 3278257 3278742 . + 0 ID=cds-WP_000070058.1;Parent=gene-CCO47_RS16140;Dbxref=GenBank:WP_000070058.1;Name=WP_000070058.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459684.1;locus_tag=CCO47_RS16140;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_000070058.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3278857 3280497 . - . ID=gene-CCO47_RS16145;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=CCO47_RS16145;old_locus_tag=CCO47_16145 NZ_CP075113.1 Protein Homology CDS 3278857 3280497 . - 0 ID=cds-WP_000974384.1;Parent=gene-CCO47_RS16145;Dbxref=GenBank:WP_000974384.1;Name=WP_000974384.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459683.1;locus_tag=CCO47_RS16145;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_000974384.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3280522 3281064 . - . ID=gene-CCO47_RS16150;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=CCO47_RS16150;old_locus_tag=CCO47_16150 NZ_CP075113.1 Protein Homology CDS 3280522 3281064 . - 0 ID=cds-WP_000848395.1;Parent=gene-CCO47_RS16150;Dbxref=GenBank:WP_000848395.1;Name=WP_000848395.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459682.1;locus_tag=CCO47_RS16150;product=replication initiation negative regulator SeqA;protein_id=WP_000848395.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3281249 3282019 . + . ID=gene-CCO47_RS16155;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=CCO47_RS16155;old_locus_tag=CCO47_16155 NZ_CP075113.1 Protein Homology CDS 3281249 3282019 . + 0 ID=cds-WP_000773245.1;Parent=gene-CCO47_RS16155;Dbxref=GenBank:WP_000773245.1;Name=WP_000773245.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459681.1;locus_tag=CCO47_RS16155;product=esterase;protein_id=WP_000773245.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3282153 3282446 . + . ID=gene-CCO47_RS16160;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=CCO47_RS16160;old_locus_tag=CCO47_16160 NZ_CP075113.1 Protein Homology CDS 3282153 3282446 . + 0 ID=cds-WP_001040939.1;Parent=gene-CCO47_RS16160;Dbxref=GenBank:WP_001040939.1;Name=WP_001040939.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459680.1;locus_tag=CCO47_RS16160;product=LexA regulated protein;protein_id=WP_001040939.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3282597 3283127 . + . ID=gene-CCO47_RS16165;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=CCO47_RS16165;old_locus_tag=CCO47_16165 NZ_CP075113.1 Protein Homology CDS 3282597 3283127 . + 0 ID=cds-WP_001018621.1;Parent=gene-CCO47_RS16165;Dbxref=GenBank:WP_001018621.1;Name=WP_001018621.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=CCO47_RS16165;product=flavodoxin FldA;protein_id=WP_001018621.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3283331 3283416 . + . ID=gene-CCO47_RS16170;Name=CCO47_RS16170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS16170;old_locus_tag=CCO47_16170;pseudo=true NZ_CP075113.1 Protein Homology CDS 3283331 3283416 . + 0 ID=cds-CCO47_RS16170;Parent=gene-CCO47_RS16170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=CCO47_RS16170;product=fur leader peptide;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3283409 3283861 . + . ID=gene-CCO47_RS16175;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=CCO47_RS16175;old_locus_tag=CCO47_16175 NZ_CP075113.1 Protein Homology CDS 3283409 3283861 . + 0 ID=cds-WP_000131700.1;Parent=gene-CCO47_RS16175;Dbxref=GenBank:WP_000131700.1;Name=WP_000131700.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459678.1;locus_tag=CCO47_RS16175;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131700.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3283976 3284902 . + . ID=gene-CCO47_RS16180;Name=tcuR;gbkey=Gene;gene=tcuR;gene_biotype=protein_coding;locus_tag=CCO47_RS16180;old_locus_tag=CCO47_16180 NZ_CP075113.1 Protein Homology CDS 3283976 3284902 . + 0 ID=cds-WP_000423384.1;Parent=gene-CCO47_RS16180;Dbxref=GenBank:WP_000423384.1;Name=WP_000423384.1;gbkey=CDS;gene=tcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459677.1;locus_tag=CCO47_RS16180;product=tricarballylate utilization LysR family transcriptional regulator TcuR;protein_id=WP_000423384.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3285000 3286403 . + . ID=gene-CCO47_RS16185;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=CCO47_RS16185;old_locus_tag=CCO47_16185 NZ_CP075113.1 Protein Homology CDS 3285000 3286403 . + 0 ID=cds-WP_000228709.1;Parent=gene-CCO47_RS16185;Dbxref=GenBank:WP_000228709.1;Name=WP_000228709.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459676.1;locus_tag=CCO47_RS16185;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=WP_000228709.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3286390 3287529 . + . ID=gene-CCO47_RS16190;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=CCO47_RS16190;old_locus_tag=CCO47_16190 NZ_CP075113.1 Protein Homology CDS 3286390 3287529 . + 0 ID=cds-WP_000811134.1;Parent=gene-CCO47_RS16190;Dbxref=GenBank:WP_000811134.1;Name=WP_000811134.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459675.1;locus_tag=CCO47_RS16190;product=tricarballylate utilization protein TcuB;protein_id=WP_000811134.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3287580 3288884 . + . ID=gene-CCO47_RS16195;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=CCO47_RS16195;old_locus_tag=CCO47_16195 NZ_CP075113.1 Protein Homology CDS 3287580 3288884 . + 0 ID=cds-WP_000057014.1;Parent=gene-CCO47_RS16195;Dbxref=GenBank:WP_000057014.1;Name=WP_000057014.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459674.1;locus_tag=CCO47_RS16195;product=tricarballylate/proton symporter TcuC;protein_id=WP_000057014.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3288933 3289265 . - . ID=gene-CCO47_RS16200;Name=CCO47_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16200;old_locus_tag=CCO47_16200 NZ_CP075113.1 Protein Homology CDS 3288933 3289265 . - 0 ID=cds-WP_000722258.1;Parent=gene-CCO47_RS16200;Dbxref=GenBank:WP_000722258.1;Name=WP_000722258.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459673.1;locus_tag=CCO47_RS16200;product=ChiQ/YbfN family lipoprotein;protein_id=WP_000722258.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3289315 3290722 . - . ID=gene-CCO47_RS16205;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=pseudogene;locus_tag=CCO47_RS16205;old_locus_tag=CCO47_16205;pseudo=true NZ_CP075113.1 Protein Homology CDS 3289315 3290722 . - 0 ID=cds-CCO47_RS16205;Parent=gene-CCO47_RS16205;Note=frameshifted;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459672.1;locus_tag=CCO47_RS16205;product=chitoporin ChiP;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3291383 3293050 . - . ID=gene-CCO47_RS16210;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=CCO47_RS16210;old_locus_tag=CCO47_16210 NZ_CP075113.1 Protein Homology CDS 3291383 3293050 . - 0 ID=cds-WP_001287181.1;Parent=gene-CCO47_RS16210;Dbxref=GenBank:WP_001287181.1;Name=WP_001287181.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=CCO47_RS16210;product=glutamine--tRNA ligase;protein_id=WP_001287181.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3293261 3295213 . - . ID=gene-CCO47_RS16215;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=CCO47_RS16215;old_locus_tag=CCO47_16215 NZ_CP075113.1 Protein Homology CDS 3293261 3295213 . - 0 ID=cds-WP_001023069.1;Parent=gene-CCO47_RS16215;Dbxref=GenBank:WP_001023069.1;Name=WP_001023069.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459670.1;locus_tag=CCO47_RS16215;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_001023069.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3295540 3296340 . + . ID=gene-CCO47_RS16220;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=CCO47_RS16220;old_locus_tag=CCO47_16220 NZ_CP075113.1 Protein Homology CDS 3295540 3296340 . + 0 ID=cds-WP_001237059.1;Parent=gene-CCO47_RS16220;Dbxref=GenBank:WP_001237059.1;Name=WP_001237059.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=CCO47_RS16220;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237059.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3296400 3297554 . + . ID=gene-CCO47_RS16225;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=CCO47_RS16225;old_locus_tag=CCO47_16225 NZ_CP075113.1 Protein Homology CDS 3296400 3297554 . + 0 ID=cds-WP_000271186.1;Parent=gene-CCO47_RS16225;Dbxref=GenBank:WP_000271186.1;Name=WP_000271186.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459668.1;locus_tag=CCO47_RS16225;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_000271186.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3297559 3298779 . + . ID=gene-CCO47_RS16230;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=CCO47_RS16230;old_locus_tag=CCO47_16230 NZ_CP075113.1 Protein Homology CDS 3297559 3298779 . + 0 ID=cds-WP_000187578.1;Parent=gene-CCO47_RS16230;Dbxref=GenBank:WP_000187578.1;Name=WP_000187578.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459667.1;locus_tag=CCO47_RS16230;product=DNA-binding transcriptional regulator NagC;protein_id=WP_000187578.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3298826 3299578 . + . ID=gene-CCO47_RS16235;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=CCO47_RS16235;old_locus_tag=CCO47_16235 NZ_CP075113.1 Protein Homology CDS 3298826 3299578 . + 0 ID=cds-WP_000153143.1;Parent=gene-CCO47_RS16235;Dbxref=GenBank:WP_000153143.1;Name=WP_000153143.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373873.1;locus_tag=CCO47_RS16235;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153143.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3299869 3301533 . + . ID=gene-CCO47_RS16240;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=CCO47_RS16240;old_locus_tag=CCO47_16240 NZ_CP075113.1 Protein Homology CDS 3299869 3301533 . + 0 ID=cds-WP_000337034.1;Parent=gene-CCO47_RS16240;Dbxref=GenBank:WP_000337034.1;Name=WP_000337034.1;Ontology_term=GO:0070981,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=L-asparagine biosynthetic process|0070981||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=CCO47_RS16240;product=asparagine synthase B;protein_id=WP_000337034.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3301756 3301832 . + . ID=gene-CCO47_RS16245;Name=CCO47_RS16245;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS16245;old_locus_tag=CCO47_16245 NZ_CP075113.1 tRNAscan-SE tRNA 3301756 3301832 . + . ID=rna-CCO47_RS16245;Parent=gene-CCO47_RS16245;anticodon=(pos:3301790..3301792);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS16245;product=tRNA-Met NZ_CP075113.1 tRNAscan-SE exon 3301756 3301832 . + . ID=exon-CCO47_RS16245-1;Parent=rna-CCO47_RS16245;anticodon=(pos:3301790..3301792);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS16245;product=tRNA-Met NZ_CP075113.1 RefSeq gene 3301841 3301925 . + . ID=gene-CCO47_RS16250;Name=CCO47_RS16250;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS16250;old_locus_tag=CCO47_16250 NZ_CP075113.1 tRNAscan-SE tRNA 3301841 3301925 . + . ID=rna-CCO47_RS16250;Parent=gene-CCO47_RS16250;anticodon=(pos:3301875..3301877);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS16250;product=tRNA-Leu NZ_CP075113.1 tRNAscan-SE exon 3301841 3301925 . + . ID=exon-CCO47_RS16250-1;Parent=rna-CCO47_RS16250;anticodon=(pos:3301875..3301877);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS16250;product=tRNA-Leu NZ_CP075113.1 RefSeq gene 3301949 3302023 . + . ID=gene-CCO47_RS16255;Name=CCO47_RS16255;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS16255;old_locus_tag=CCO47_16255 NZ_CP075113.1 tRNAscan-SE tRNA 3301949 3302023 . + . ID=rna-CCO47_RS16255;Parent=gene-CCO47_RS16255;anticodon=(pos:3301981..3301983);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS16255;product=tRNA-Gln NZ_CP075113.1 tRNAscan-SE exon 3301949 3302023 . + . ID=exon-CCO47_RS16255-1;Parent=rna-CCO47_RS16255;anticodon=(pos:3301981..3301983);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS16255;product=tRNA-Gln NZ_CP075113.1 RefSeq gene 3302059 3302133 . + . ID=gene-CCO47_RS16260;Name=CCO47_RS16260;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS16260;old_locus_tag=CCO47_16260 NZ_CP075113.1 tRNAscan-SE tRNA 3302059 3302133 . + . ID=rna-CCO47_RS16260;Parent=gene-CCO47_RS16260;anticodon=(pos:3302091..3302093);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS16260;product=tRNA-Gln NZ_CP075113.1 tRNAscan-SE exon 3302059 3302133 . + . ID=exon-CCO47_RS16260-1;Parent=rna-CCO47_RS16260;anticodon=(pos:3302091..3302093);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS16260;product=tRNA-Gln NZ_CP075113.1 RefSeq gene 3302149 3302225 . + . ID=gene-CCO47_RS16265;Name=CCO47_RS16265;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS16265;old_locus_tag=CCO47_16265 NZ_CP075113.1 tRNAscan-SE tRNA 3302149 3302225 . + . ID=rna-CCO47_RS16265;Parent=gene-CCO47_RS16265;anticodon=(pos:3302183..3302185);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS16265;product=tRNA-Met NZ_CP075113.1 tRNAscan-SE exon 3302149 3302225 . + . ID=exon-CCO47_RS16265-1;Parent=rna-CCO47_RS16265;anticodon=(pos:3302183..3302185);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS16265;product=tRNA-Met NZ_CP075113.1 RefSeq gene 3302272 3302346 . + . ID=gene-CCO47_RS16270;Name=CCO47_RS16270;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS16270;old_locus_tag=CCO47_16270 NZ_CP075113.1 tRNAscan-SE tRNA 3302272 3302346 . + . ID=rna-CCO47_RS16270;Parent=gene-CCO47_RS16270;anticodon=(pos:3302304..3302306);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS16270;product=tRNA-Gln NZ_CP075113.1 tRNAscan-SE exon 3302272 3302346 . + . ID=exon-CCO47_RS16270-1;Parent=rna-CCO47_RS16270;anticodon=(pos:3302304..3302306);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS16270;product=tRNA-Gln NZ_CP075113.1 RefSeq gene 3302390 3302464 . + . ID=gene-CCO47_RS16275;Name=CCO47_RS16275;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS16275;old_locus_tag=CCO47_16275 NZ_CP075113.1 tRNAscan-SE tRNA 3302390 3302464 . + . ID=rna-CCO47_RS16275;Parent=gene-CCO47_RS16275;anticodon=(pos:3302422..3302424);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS16275;product=tRNA-Gln NZ_CP075113.1 tRNAscan-SE exon 3302390 3302464 . + . ID=exon-CCO47_RS16275-1;Parent=rna-CCO47_RS16275;anticodon=(pos:3302422..3302424);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS16275;product=tRNA-Gln NZ_CP075113.1 RefSeq gene 3302600 3303175 . + . ID=gene-CCO47_RS16280;Name=CCO47_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16280;old_locus_tag=CCO47_16280 NZ_CP075113.1 Protein Homology CDS 3302600 3303175 . + 0 ID=cds-WP_094912358.1;Parent=gene-CCO47_RS16280;Dbxref=GenBank:WP_094912358.1;Name=WP_094912358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459664.1;locus_tag=CCO47_RS16280;product=hypothetical protein;protein_id=WP_094912358.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3303242 3304417 . - . ID=gene-CCO47_RS16285;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=CCO47_RS16285;old_locus_tag=CCO47_16285 NZ_CP075113.1 Protein Homology CDS 3303242 3304417 . - 0 ID=cds-WP_000184633.1;Parent=gene-CCO47_RS16285;Dbxref=GenBank:WP_000184633.1;Name=WP_000184633.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=CCO47_RS16285;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_000184633.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3304561 3305985 . + . ID=gene-CCO47_RS16290;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=CCO47_RS16290;old_locus_tag=CCO47_16290 NZ_CP075113.1 Protein Homology CDS 3304561 3305985 . + 0 ID=cds-WP_001519200.1;Parent=gene-CCO47_RS16290;Dbxref=GenBank:WP_001519200.1;Name=WP_001519200.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=CCO47_RS16290;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_001519200.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3306190 3307236 . + . ID=gene-CCO47_RS16295;Name=CCO47_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16295;old_locus_tag=CCO47_16295 NZ_CP075113.1 Protein Homology CDS 3306190 3307236 . + 0 ID=cds-WP_001018045.1;Parent=gene-CCO47_RS16295;Dbxref=GenBank:WP_001018045.1;Name=WP_001018045.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=CCO47_RS16295;product=PhoH family protein;protein_id=WP_001018045.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3307233 3307706 . + . ID=gene-CCO47_RS16300;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=CCO47_RS16300;old_locus_tag=CCO47_16300 NZ_CP075113.1 Protein Homology CDS 3307233 3307706 . + 0 ID=cds-WP_000084480.1;Parent=gene-CCO47_RS16300;Dbxref=GenBank:WP_000084480.1;Name=WP_000084480.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459660.1;locus_tag=CCO47_RS16300;product=rRNA maturation RNase YbeY;protein_id=WP_000084480.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3307864 3308742 . + . ID=gene-CCO47_RS16305;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=CCO47_RS16305;old_locus_tag=CCO47_16305 NZ_CP075113.1 Protein Homology CDS 3307864 3308742 . + 0 ID=cds-WP_001278615.1;Parent=gene-CCO47_RS16305;Dbxref=GenBank:WP_001278615.1;Name=WP_001278615.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459659.1;locus_tag=CCO47_RS16305;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278615.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3308762 3310300 . + . ID=gene-CCO47_RS16310;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=CCO47_RS16310;old_locus_tag=CCO47_16310 NZ_CP075113.1 Protein Homology CDS 3308762 3310300 . + 0 ID=cds-WP_001574036.1;Parent=gene-CCO47_RS16310;Dbxref=GenBank:WP_001574036.1;Name=WP_001574036.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=CCO47_RS16310;product=apolipoprotein N-acyltransferase;protein_id=WP_001574036.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3310655 3311563 . + . ID=gene-CCO47_RS16315;Name=CCO47_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16315;old_locus_tag=CCO47_16315 NZ_CP075113.1 Protein Homology CDS 3310655 3311563 . + 0 ID=cds-WP_001518176.1;Parent=gene-CCO47_RS16315;Dbxref=GenBank:WP_001518176.1;Name=WP_001518176.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=CCO47_RS16315;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_001518176.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3311723 3312463 . + . ID=gene-CCO47_RS16320;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=CCO47_RS16320;old_locus_tag=CCO47_16320 NZ_CP075113.1 Protein Homology CDS 3311723 3312463 . + 0 ID=cds-WP_000020930.1;Parent=gene-CCO47_RS16320;Dbxref=GenBank:WP_000020930.1;Name=WP_000020930.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459656.1;locus_tag=CCO47_RS16320;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_000020930.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3312463 3313137 . + . ID=gene-CCO47_RS16325;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=CCO47_RS16325;old_locus_tag=CCO47_16325 NZ_CP075113.1 Protein Homology CDS 3312463 3313137 . + 0 ID=cds-WP_000272794.1;Parent=gene-CCO47_RS16325;Dbxref=GenBank:WP_000272794.1;Name=WP_000272794.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=CCO47_RS16325;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272794.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3313137 3313862 . + . ID=gene-CCO47_RS16330;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=CCO47_RS16330;old_locus_tag=CCO47_16330 NZ_CP075113.1 Protein Homology CDS 3313137 3313862 . + 0 ID=cds-WP_000631369.1;Parent=gene-CCO47_RS16330;Dbxref=GenBank:WP_000631369.1;Name=WP_000631369.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=CCO47_RS16330;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WP_000631369.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3313979 3314914 . + . ID=gene-CCO47_RS16335;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=CCO47_RS16335;old_locus_tag=CCO47_16335 NZ_CP075113.1 Protein Homology CDS 3313979 3314914 . + 0 ID=cds-WP_001207442.1;Parent=gene-CCO47_RS16335;Dbxref=GenBank:WP_001207442.1;Name=WP_001207442.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459653.1;locus_tag=CCO47_RS16335;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_001207442.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3314946 3316184 . + . ID=gene-CCO47_RS16340;Name=CCO47_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16340;old_locus_tag=CCO47_16340 NZ_CP075113.1 Protein Homology CDS 3314946 3316184 . + 0 ID=cds-WP_000498869.1;Parent=gene-CCO47_RS16340;Dbxref=GenBank:WP_000498869.1;Name=WP_000498869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459652.1;locus_tag=CCO47_RS16340;product=hypothetical protein;protein_id=WP_000498869.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3316260 3317939 . + . ID=gene-CCO47_RS16345;Name=hscC;gbkey=Gene;gene=hscC;gene_biotype=protein_coding;locus_tag=CCO47_RS16345;old_locus_tag=CCO47_16345 NZ_CP075113.1 Protein Homology CDS 3316260 3317939 . + 0 ID=cds-WP_000368030.1;Parent=gene-CCO47_RS16345;Dbxref=GenBank:WP_000368030.1;Name=WP_000368030.1;gbkey=CDS;gene=hscC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459651.1;locus_tag=CCO47_RS16345;product=molecular chaperone HscC;protein_id=WP_000368030.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3317961 3319433 . - . ID=gene-CCO47_RS16350;Name=CCO47_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16350;old_locus_tag=CCO47_16350 NZ_CP075113.1 Protein Homology CDS 3317961 3319433 . - 0 ID=cds-WP_001017751.1;Parent=gene-CCO47_RS16350;Dbxref=GenBank:WP_001017751.1;Name=WP_001017751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459650.1;locus_tag=CCO47_RS16350;product=J domain-containing protein;protein_id=WP_001017751.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3319430 3320125 . - . ID=gene-CCO47_RS16355;Name=CCO47_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16355;old_locus_tag=CCO47_16355 NZ_CP075113.1 Protein Homology CDS 3319430 3320125 . - 0 ID=cds-WP_000356626.1;Parent=gene-CCO47_RS16355;Dbxref=GenBank:WP_000356626.1;Name=WP_000356626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459649.1;locus_tag=CCO47_RS16355;product=DUF1266 domain-containing protein;protein_id=WP_000356626.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3320137 3321570 . - . ID=gene-CCO47_RS16360;Name=CCO47_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16360;old_locus_tag=CCO47_16360 NZ_CP075113.1 Protein Homology CDS 3320137 3321570 . - 0 ID=cds-WP_000845205.1;Parent=gene-CCO47_RS16360;Dbxref=GenBank:WP_000845205.1;Name=WP_000845205.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459648.1;locus_tag=CCO47_RS16360;product=J domain-containing protein;protein_id=WP_000845205.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3321567 3322274 . - . ID=gene-CCO47_RS16365;Name=CCO47_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16365;old_locus_tag=CCO47_16365 NZ_CP075113.1 Protein Homology CDS 3321567 3322274 . - 0 ID=cds-WP_001575803.1;Parent=gene-CCO47_RS16365;Dbxref=GenBank:WP_001575803.1;Name=WP_001575803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459647.1;locus_tag=CCO47_RS16365;product=DUF1266 domain-containing protein;protein_id=WP_001575803.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3322399 3323394 . + . ID=gene-CCO47_RS16370;Name=CCO47_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16370;old_locus_tag=CCO47_16370 NZ_CP075113.1 Protein Homology CDS 3322399 3323394 . + 0 ID=cds-WP_001016627.1;Parent=gene-CCO47_RS16370;Dbxref=GenBank:WP_001016627.1;Name=WP_001016627.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459646.1;locus_tag=CCO47_RS16370;product=tetratricopeptide repeat protein;protein_id=WP_001016627.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3323433 3323906 . - . ID=gene-CCO47_RS16375;Name=CCO47_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16375;old_locus_tag=CCO47_16375 NZ_CP075113.1 Protein Homology CDS 3323433 3323906 . - 0 ID=cds-WP_001044884.1;Parent=gene-CCO47_RS16375;Dbxref=GenBank:WP_001044884.1;Name=WP_001044884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=CCO47_RS16375;product=zinc ribbon-containing protein;protein_id=WP_001044884.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3323999 3325927 . - . ID=gene-CCO47_RS16380;Name=CCO47_RS16380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS16380;old_locus_tag=CCO47_16380;pseudo=true NZ_CP075113.1 Protein Homology CDS 3323999 3325927 . - 0 ID=cds-CCO47_RS16380;Parent=gene-CCO47_RS16380;Note=internal stop;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=CCO47_RS16380;product=sigma 54-interacting transcriptional regulator;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3325995 3326948 . - . ID=gene-CCO47_RS16385;Name=CCO47_RS16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16385;old_locus_tag=CCO47_16385 NZ_CP075113.1 Protein Homology CDS 3325995 3326948 . - 0 ID=cds-WP_000694480.1;Parent=gene-CCO47_RS16385;Dbxref=GenBank:WP_000694480.1;Name=WP_000694480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459643.1;locus_tag=CCO47_RS16385;product=2-keto-3-deoxygluconate permease;protein_id=WP_000694480.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3326998 3328170 . - . ID=gene-CCO47_RS16390;Name=CCO47_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16390;old_locus_tag=CCO47_16390 NZ_CP075113.1 Protein Homology CDS 3326998 3328170 . - 0 ID=cds-WP_001675440.1;Parent=gene-CCO47_RS16390;Dbxref=GenBank:WP_001675440.1;Name=WP_001675440.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=CCO47_RS16390;product=UxaA family hydrolase;protein_id=WP_001675440.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3328187 3328528 . - . ID=gene-CCO47_RS16395;Name=CCO47_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16395;old_locus_tag=CCO47_16395 NZ_CP075113.1 Protein Homology CDS 3328187 3328528 . - 0 ID=cds-WP_001574029.1;Parent=gene-CCO47_RS16395;Dbxref=GenBank:WP_001574029.1;Name=WP_001574029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=CCO47_RS16395;product=UxaA family hydrolase;protein_id=WP_001574029.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3328765 3331347 . + . ID=gene-CCO47_RS16400;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=CCO47_RS16400;old_locus_tag=CCO47_16400 NZ_CP075113.1 Protein Homology CDS 3328765 3331347 . + 0 ID=cds-WP_001157918.1;Parent=gene-CCO47_RS16400;Dbxref=GenBank:WP_001157918.1;Name=WP_001157918.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=CCO47_RS16400;product=leucine--tRNA ligase;protein_id=WP_001157918.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3331362 3331952 . + . ID=gene-CCO47_RS16405;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=CCO47_RS16405;old_locus_tag=CCO47_16405 NZ_CP075113.1 Protein Homology CDS 3331362 3331952 . + 0 ID=cds-WP_001269950.1;Parent=gene-CCO47_RS16405;Dbxref=GenBank:WP_001269950.1;Name=WP_001269950.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459639.1;locus_tag=CCO47_RS16405;product=LPS assembly lipoprotein LptE;protein_id=WP_001269950.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3331952 3332983 . + . ID=gene-CCO47_RS16410;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=CCO47_RS16410;old_locus_tag=CCO47_16410 NZ_CP075113.1 Protein Homology CDS 3331952 3332983 . + 0 ID=cds-WP_000620491.1;Parent=gene-CCO47_RS16410;Dbxref=GenBank:WP_000620491.1;Name=WP_000620491.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459638.1;locus_tag=CCO47_RS16410;product=DNA polymerase III subunit delta;protein_id=WP_000620491.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3332985 3333626 . + . ID=gene-CCO47_RS16415;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=CCO47_RS16415;old_locus_tag=CCO47_16415 NZ_CP075113.1 Protein Homology CDS 3332985 3333626 . + 0 ID=cds-WP_001518902.1;Parent=gene-CCO47_RS16415;Dbxref=GenBank:WP_001518902.1;Name=WP_001518902.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459637.1;locus_tag=CCO47_RS16415;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_001518902.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3333601 3334695 . - . ID=gene-CCO47_RS16420;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=CCO47_RS16420;old_locus_tag=CCO47_16420 NZ_CP075113.1 Protein Homology CDS 3333601 3334695 . - 0 ID=cds-WP_001173267.1;Parent=gene-CCO47_RS16420;Dbxref=GenBank:WP_001173267.1;Name=WP_001173267.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;gene=cobD;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459636.1;locus_tag=CCO47_RS16420;product=threonine-phosphate decarboxylase CobD;protein_id=WP_001173267.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3334792 3335400 . + . ID=gene-CCO47_RS16425;Name=CCO47_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16425;old_locus_tag=CCO47_16425 NZ_CP075113.1 Protein Homology CDS 3334792 3335400 . + 0 ID=cds-WP_001241913.1;Parent=gene-CCO47_RS16425;Dbxref=GenBank:WP_001241913.1;Name=WP_001241913.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459635.1;locus_tag=CCO47_RS16425;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_001241913.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3335729 3336046 . + . ID=gene-CCO47_RS16430;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=CCO47_RS16430;old_locus_tag=CCO47_16430 NZ_CP075113.1 Protein Homology CDS 3335729 3336046 . + 0 ID=cds-WP_001161673.1;Parent=gene-CCO47_RS16430;Dbxref=GenBank:WP_001161673.1;Name=WP_001161673.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=CCO47_RS16430;product=ribosome silencing factor;protein_id=WP_001161673.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3336050 3336517 . + . ID=gene-CCO47_RS16435;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=CCO47_RS16435;old_locus_tag=CCO47_16435 NZ_CP075113.1 Protein Homology CDS 3336050 3336517 . + 0 ID=cds-WP_000776107.1;Parent=gene-CCO47_RS16435;Dbxref=GenBank:WP_000776107.1;Name=WP_000776107.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=CCO47_RS16435;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000776107.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3336548 3338449 . + . ID=gene-CCO47_RS16440;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=CCO47_RS16440;old_locus_tag=CCO47_16440 NZ_CP075113.1 Protein Homology CDS 3336548 3338449 . + 0 ID=cds-WP_000828700.1;Parent=gene-CCO47_RS16440;Dbxref=GenBank:WP_000828700.1;Name=WP_000828700.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=CCO47_RS16440;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_000828700.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3338452 3339564 . + . ID=gene-CCO47_RS16445;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=CCO47_RS16445;old_locus_tag=CCO47_16445 NZ_CP075113.1 Protein Homology CDS 3338452 3339564 . + 0 ID=cds-WP_000131713.1;Parent=gene-CCO47_RS16445;Dbxref=GenBank:WP_000131713.1;Name=WP_000131713.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=CCO47_RS16445;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_000131713.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3339575 3340708 . + . ID=gene-CCO47_RS16450;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=CCO47_RS16450;old_locus_tag=CCO47_16450 NZ_CP075113.1 Protein Homology CDS 3339575 3340708 . + 0 ID=cds-WP_001231303.1;Parent=gene-CCO47_RS16450;Dbxref=GenBank:WP_001231303.1;Name=WP_001231303.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=CCO47_RS16450;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_001231303.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3340848 3342059 . + . ID=gene-CCO47_RS16455;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=CCO47_RS16455;old_locus_tag=CCO47_16455 NZ_CP075113.1 Protein Homology CDS 3340848 3342059 . + 0 ID=cds-WP_000858711.1;Parent=gene-CCO47_RS16455;Dbxref=GenBank:WP_000858711.1;Name=WP_000858711.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=CCO47_RS16455;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_000858711.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3342168 3342431 . + . ID=gene-CCO47_RS16460;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=CCO47_RS16460;old_locus_tag=CCO47_16460 NZ_CP075113.1 Protein Homology CDS 3342168 3342431 . + 0 ID=cds-WP_000850547.1;Parent=gene-CCO47_RS16460;Dbxref=GenBank:WP_000850547.1;Name=WP_000850547.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=CCO47_RS16460;product=DUF493 family protein YbeD;protein_id=WP_000850547.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3342531 3343172 . + . ID=gene-CCO47_RS16465;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=CCO47_RS16465;old_locus_tag=CCO47_16465 NZ_CP075113.1 Protein Homology CDS 3342531 3343172 . + 0 ID=cds-WP_000284009.1;Parent=gene-CCO47_RS16465;Dbxref=GenBank:WP_000284009.1;Name=WP_000284009.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=CCO47_RS16465;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_000284009.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3343474 3344427 . + . ID=gene-CCO47_RS16470;Name=CCO47_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16470;old_locus_tag=CCO47_16470 NZ_CP075113.1 Protein Homology CDS 3343474 3344427 . + 0 ID=cds-WP_001282817.1;Parent=gene-CCO47_RS16470;Dbxref=GenBank:WP_001282817.1;Name=WP_001282817.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459626.1;locus_tag=CCO47_RS16470;product=YbeF family transcriptional regulator;protein_id=WP_001282817.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3344633 3345598 . + . ID=gene-CCO47_RS16475;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=CCO47_RS16475;old_locus_tag=CCO47_16475 NZ_CP075113.1 Protein Homology CDS 3344633 3345598 . + 0 ID=cds-WP_000042640.1;Parent=gene-CCO47_RS16475;Dbxref=GenBank:WP_000042640.1;Name=WP_000042640.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=CCO47_RS16475;product=lipoyl synthase;protein_id=WP_000042640.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3345684 3345887 . - . ID=gene-CCO47_RS16480;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=CCO47_RS16480;old_locus_tag=CCO47_16480 NZ_CP075113.1 Protein Homology CDS 3345684 3345887 . - 0 ID=cds-WP_000503938.1;Parent=gene-CCO47_RS16480;Dbxref=GenBank:WP_000503938.1;Name=WP_000503938.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459624.1;locus_tag=CCO47_RS16480;product=twin-arginine translocase subunit TatE;protein_id=WP_000503938.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3346016 3346804 . - . ID=gene-CCO47_RS16485;Name=CCO47_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16485;old_locus_tag=CCO47_16485 NZ_CP075113.1 Protein Homology CDS 3346016 3346804 . - 0 ID=cds-WP_000495790.1;Parent=gene-CCO47_RS16485;Dbxref=GenBank:WP_000495790.1;Name=WP_000495790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459623.1;locus_tag=CCO47_RS16485;product=deaminated glutathione amidase;protein_id=WP_000495790.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3346895 3347278 . + . ID=gene-CCO47_RS16490;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=CCO47_RS16490;old_locus_tag=CCO47_16490 NZ_CP075113.1 Protein Homology CDS 3346895 3347278 . + 0 ID=cds-WP_000939753.1;Parent=gene-CCO47_RS16490;Dbxref=GenBank:WP_000939753.1;Name=WP_000939753.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459622.1;locus_tag=CCO47_RS16490;product=fluoride efflux transporter CrcB;protein_id=WP_000939753.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3347336 3347545 . - . ID=gene-CCO47_RS16495;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO47_RS16495;old_locus_tag=CCO47_16495 NZ_CP075113.1 Protein Homology CDS 3347336 3347545 . - 0 ID=cds-WP_000034826.1;Parent=gene-CCO47_RS16495;Dbxref=GenBank:WP_000034826.1;Name=WP_000034826.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459621.1;locus_tag=CCO47_RS16495;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034826.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3347733 3348305 . - . ID=gene-CCO47_RS16500;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=CCO47_RS16500;old_locus_tag=CCO47_16500 NZ_CP075113.1 Protein Homology CDS 3347733 3348305 . - 0 ID=cds-WP_001574017.1;Parent=gene-CCO47_RS16500;Dbxref=GenBank:WP_001574017.1;Name=WP_001574017.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459620.1;locus_tag=CCO47_RS16500;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_001574017.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3348684 3350069 . + . ID=gene-CCO47_RS16505;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=CCO47_RS16505;old_locus_tag=CCO47_16505 NZ_CP075113.1 Protein Homology CDS 3348684 3350069 . + 0 ID=cds-WP_000958611.1;Parent=gene-CCO47_RS16505;Dbxref=GenBank:WP_000958611.1;Name=WP_000958611.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459619.1;locus_tag=CCO47_RS16505;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000958611.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3350123 3350803 . - . ID=gene-CCO47_RS16510;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=CCO47_RS16510;old_locus_tag=CCO47_16510 NZ_CP075113.1 Protein Homology CDS 3350123 3350803 . - 0 ID=cds-WP_000138778.1;Parent=gene-CCO47_RS16510;Dbxref=GenBank:WP_000138778.1;Name=WP_000138778.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=CCO47_RS16510;product=two-component response regulator DpiA;protein_id=WP_000138778.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3350772 3352430 . - . ID=gene-CCO47_RS16515;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=pseudogene;locus_tag=CCO47_RS16515;old_locus_tag=CCO47_16515;pseudo=true NZ_CP075113.1 Protein Homology CDS 3350772 3352430 . - 0 ID=cds-CCO47_RS16515;Parent=gene-CCO47_RS16515;Note=frameshifted;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=CCO47_RS16515;product=sensor histidine kinase DpiB;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3352815 3353891 . + . ID=gene-CCO47_RS16520;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=CCO47_RS16520;old_locus_tag=CCO47_16520 NZ_CP075113.1 Protein Homology CDS 3352815 3353891 . + 0 ID=cds-WP_000467872.1;Parent=gene-CCO47_RS16520;Dbxref=GenBank:WP_000467872.1;Name=WP_000467872.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=CCO47_RS16520;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_000467872.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3353888 3354184 . + . ID=gene-CCO47_RS16525;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=CCO47_RS16525;old_locus_tag=CCO47_16525 NZ_CP075113.1 Protein Homology CDS 3353888 3354184 . + 0 ID=cds-WP_000700679.1;Parent=gene-CCO47_RS16525;Dbxref=GenBank:WP_000700679.1;Name=WP_000700679.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459615.1;locus_tag=CCO47_RS16525;product=citrate lyase acyl carrier protein;protein_id=WP_000700679.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3354181 3355089 . + . ID=gene-CCO47_RS16530;Name=CCO47_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16530;old_locus_tag=CCO47_16530 NZ_CP075113.1 Protein Homology CDS 3354181 3355089 . + 0 ID=cds-WP_000622343.1;Parent=gene-CCO47_RS16530;Dbxref=GenBank:WP_000622343.1;Name=WP_000622343.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=CCO47_RS16530;product=aldolase/citrate lyase family protein;protein_id=WP_000622343.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3355099 3356628 . + . ID=gene-CCO47_RS16535;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=CCO47_RS16535;old_locus_tag=CCO47_16535 NZ_CP075113.1 Protein Homology CDS 3355099 3356628 . + 0 ID=cds-WP_000192348.1;Parent=gene-CCO47_RS16535;Dbxref=GenBank:WP_000192348.1;Name=WP_000192348.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459613.1;locus_tag=CCO47_RS16535;product=citrate lyase subunit alpha;protein_id=WP_000192348.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3356632 3357183 . + . ID=gene-CCO47_RS16540;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=CCO47_RS16540;old_locus_tag=CCO47_16540 NZ_CP075113.1 Protein Homology CDS 3356632 3357183 . + 0 ID=cds-WP_001236075.1;Parent=gene-CCO47_RS16540;Dbxref=GenBank:WP_001236075.1;Name=WP_001236075.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459612.1;locus_tag=CCO47_RS16540;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_001236075.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3357155 3358051 . + . ID=gene-CCO47_RS16545;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=CCO47_RS16545;old_locus_tag=CCO47_16545 NZ_CP075113.1 Protein Homology CDS 3357155 3358051 . + 0 ID=cds-WP_000982659.1;Parent=gene-CCO47_RS16545;Dbxref=GenBank:WP_000982659.1;Name=WP_000982659.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459611.1;locus_tag=CCO47_RS16545;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000982659.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3358089 3359552 . + . ID=gene-CCO47_RS16550;Name=citT;gbkey=Gene;gene=citT;gene_biotype=pseudogene;locus_tag=CCO47_RS16550;old_locus_tag=CCO47_16550;pseudo=true NZ_CP075113.1 Protein Homology CDS 3358089 3359552 . + 0 ID=cds-CCO47_RS16550;Parent=gene-CCO47_RS16550;Note=internal stop;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459610.1;locus_tag=CCO47_RS16550;product=citrate/succinate antiporter CitT;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3359662 3360468 . + . ID=gene-CCO47_RS16555;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=CCO47_RS16555;old_locus_tag=CCO47_16555 NZ_CP075113.1 Protein Homology CDS 3359662 3360468 . + 0 ID=cds-WP_039507891.1;Parent=gene-CCO47_RS16555;Dbxref=GenBank:WP_039507891.1;Name=WP_039507891.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459609.1;locus_tag=CCO47_RS16555;product=ribonuclease I;protein_id=WP_039507891.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3360703 3361113 . + . ID=gene-CCO47_RS16560;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=CCO47_RS16560;old_locus_tag=CCO47_16560 NZ_CP075113.1 Protein Homology CDS 3360703 3361113 . + 0 ID=cds-WP_000089748.1;Parent=gene-CCO47_RS16560;Dbxref=GenBank:WP_000089748.1;Name=WP_000089748.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459608.1;locus_tag=CCO47_RS16560;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089748.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3361196 3362434 . - . ID=gene-CCO47_RS16565;Name=CCO47_RS16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16565;old_locus_tag=CCO47_16565 NZ_CP075113.1 Protein Homology CDS 3361196 3362434 . - 0 ID=cds-WP_000646104.1;Parent=gene-CCO47_RS16565;Dbxref=GenBank:WP_000646104.1;Name=WP_000646104.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459607.1;locus_tag=CCO47_RS16565;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_000646104.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3362657 3363085 . + . ID=gene-CCO47_RS16570;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=CCO47_RS16570;old_locus_tag=CCO47_16570 NZ_CP075113.1 Protein Homology CDS 3362657 3363085 . + 0 ID=cds-WP_000278499.1;Parent=gene-CCO47_RS16570;Dbxref=GenBank:WP_000278499.1;Name=WP_000278499.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459606.1;locus_tag=CCO47_RS16570;product=universal stress protein UspG;protein_id=WP_000278499.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3363153 3363920 . - . ID=gene-CCO47_RS16575;Name=CCO47_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16575;old_locus_tag=CCO47_16575 NZ_CP075113.1 Protein Homology CDS 3363153 3363920 . - 0 ID=cds-WP_000417090.1;Parent=gene-CCO47_RS16575;Dbxref=GenBank:WP_000417090.1;Name=WP_000417090.1;Ontology_term=GO:0019645,GO:0009389,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459605.1;locus_tag=CCO47_RS16575;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000417090.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3363920 3364477 . - . ID=gene-CCO47_RS16580;Name=CCO47_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16580;old_locus_tag=CCO47_16580 NZ_CP075113.1 Protein Homology CDS 3363920 3364477 . - 0 ID=cds-WP_001250381.1;Parent=gene-CCO47_RS16580;Dbxref=GenBank:WP_001250381.1;Name=WP_001250381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459604.1;locus_tag=CCO47_RS16580;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001250381.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3364474 3366754 . - . ID=gene-CCO47_RS16585;Name=CCO47_RS16585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS16585;old_locus_tag=CCO47_16585;pseudo=true NZ_CP075113.1 Protein Homology CDS 3364474 3366754 . - 0 ID=cds-CCO47_RS16585;Parent=gene-CCO47_RS16585;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=CCO47_RS16585;product=molybdopterin-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3366747 3367307 . - . ID=gene-CCO47_RS16595;Name=CCO47_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16595;old_locus_tag=CCO47_16595 NZ_CP075113.1 Protein Homology CDS 3366747 3367307 . - 0 ID=cds-WP_000377433.1;Parent=gene-CCO47_RS16595;Dbxref=GenBank:WP_000377433.1;Name=WP_000377433.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459602.1;locus_tag=CCO47_RS16595;product=TorD/DmsD family molecular chaperone;protein_id=WP_000377433.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3367640 3369205 . - . ID=gene-CCO47_RS16600;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=CCO47_RS16600;old_locus_tag=CCO47_16600 NZ_CP075113.1 Protein Homology CDS 3367640 3369205 . - 0 ID=cds-WP_000887644.1;Parent=gene-CCO47_RS16600;Dbxref=GenBank:WP_000887644.1;Name=WP_000887644.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459601.1;locus_tag=CCO47_RS16600;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887644.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3369447 3370010 . - . ID=gene-CCO47_RS16605;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=CCO47_RS16605;old_locus_tag=CCO47_16605 NZ_CP075113.1 Protein Homology CDS 3369447 3370010 . - 0 ID=cds-WP_000052802.1;Parent=gene-CCO47_RS16605;Dbxref=GenBank:WP_000052802.1;Name=WP_000052802.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=CCO47_RS16605;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052802.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3370451 3371197 . + . ID=gene-CCO47_RS16610;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=CCO47_RS16610;old_locus_tag=CCO47_16610 NZ_CP075113.1 Protein Homology CDS 3370451 3371197 . + 0 ID=cds-WP_000597119.1;Parent=gene-CCO47_RS16610;Dbxref=GenBank:WP_000597119.1;Name=WP_000597119.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459599.1;locus_tag=CCO47_RS16610;product=thiol:disulfide interchange protein DsbG;protein_id=WP_000597119.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3371514 3372431 . + . ID=gene-CCO47_RS16615;Name=citR;gbkey=Gene;gene=citR;gene_biotype=protein_coding;gene_synonym=ybdO;locus_tag=CCO47_RS16615;old_locus_tag=CCO47_16615 NZ_CP075113.1 Protein Homology CDS 3371514 3372431 . + 0 ID=cds-WP_000002498.1;Parent=gene-CCO47_RS16615;Dbxref=GenBank:WP_000002498.1;Name=WP_000002498.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=citR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000002498.1;locus_tag=CCO47_RS16615;product=DNA-binding transcriptional repressor CitR;protein_id=WP_000002498.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3372581 3373816 . + . ID=gene-CCO47_RS16620;Name=CCO47_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16620;old_locus_tag=CCO47_16620 NZ_CP075113.1 Protein Homology CDS 3372581 3373816 . + 0 ID=cds-WP_000118137.1;Parent=gene-CCO47_RS16620;Dbxref=GenBank:WP_000118137.1;Name=WP_000118137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459597.1;locus_tag=CCO47_RS16620;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000118137.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3373789 3374406 . + . ID=gene-CCO47_RS16625;Name=CCO47_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16625;old_locus_tag=CCO47_16625 NZ_CP075113.1 Protein Homology CDS 3373789 3374406 . + 0 ID=cds-WP_001164756.1;Parent=gene-CCO47_RS16625;Dbxref=GenBank:WP_001164756.1;Name=WP_001164756.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459596.1;locus_tag=CCO47_RS16625;product=IbrB-like domain-containing protein;protein_id=WP_001164756.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3374407 3375567 . - . ID=gene-CCO47_RS16630;Name=CCO47_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16630;old_locus_tag=CCO47_16630 NZ_CP075113.1 Protein Homology CDS 3374407 3375567 . - 0 ID=cds-WP_001245592.1;Parent=gene-CCO47_RS16630;Dbxref=GenBank:WP_001245592.1;Name=WP_001245592.1;Ontology_term=GO:0008483,GO:0016740;gbkey=CDS;go_function=transaminase activity|0008483||IEA,transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459595.1;locus_tag=CCO47_RS16630;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_001245592.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3375694 3376780 . + . ID=gene-CCO47_RS16635;Name=CCO47_RS16635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS16635;old_locus_tag=CCO47_16635;pseudo=true NZ_CP075113.1 Protein Homology CDS 3375694 3376780 . + 0 ID=cds-CCO47_RS16635;Parent=gene-CCO47_RS16635;Note=frameshifted;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459594.1;locus_tag=CCO47_RS16635;product=oxidoreductase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3376816 3377013 . - . ID=gene-CCO47_RS16640;Name=CCO47_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16640;old_locus_tag=CCO47_16640 NZ_CP075113.1 Protein Homology CDS 3376816 3377013 . - 0 ID=cds-WP_000460619.1;Parent=gene-CCO47_RS16640;Dbxref=GenBank:WP_000460619.1;Name=WP_000460619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=CCO47_RS16640;product=YbdD/YjiX family protein;protein_id=WP_000460619.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3377077 3379182 . - . ID=gene-CCO47_RS16645;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=CCO47_RS16645;old_locus_tag=CCO47_16645 NZ_CP075113.1 Protein Homology CDS 3377077 3379182 . - 0 ID=cds-WP_001043108.1;Parent=gene-CCO47_RS16645;Dbxref=GenBank:WP_001043108.1;Name=WP_001043108.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459592.1;locus_tag=CCO47_RS16645;product=pyruvate/proton symporter CstA;protein_id=WP_001043108.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3379364 3379777 . - . ID=gene-CCO47_RS16650;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=CCO47_RS16650;old_locus_tag=CCO47_16650 NZ_CP075113.1 Protein Homology CDS 3379364 3379777 . - 0 ID=cds-WP_000637966.1;Parent=gene-CCO47_RS16650;Dbxref=GenBank:WP_000637966.1;Name=WP_000637966.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459591.1;locus_tag=CCO47_RS16650;product=proofreading thioesterase EntH;protein_id=WP_000637966.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3379780 3380535 . - . ID=gene-CCO47_RS16655;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=CCO47_RS16655;old_locus_tag=CCO47_16655 NZ_CP075113.1 Protein Homology CDS 3379780 3380535 . - 0 ID=cds-WP_001112177.1;Parent=gene-CCO47_RS16655;Dbxref=GenBank:WP_001112177.1;Name=WP_001112177.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459590.1;locus_tag=CCO47_RS16655;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_001112177.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3380535 3381392 . - . ID=gene-CCO47_RS16660;Name=CCO47_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16660;old_locus_tag=CCO47_16660 NZ_CP075113.1 Protein Homology CDS 3380535 3381392 . - 0 ID=cds-WP_001007166.1;Parent=gene-CCO47_RS16660;Dbxref=GenBank:WP_001007166.1;Name=WP_001007166.1;Ontology_term=GO:0008908,GO:0016879;gbkey=CDS;go_function=isochorismatase activity|0008908||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=CCO47_RS16660;product=isochorismatase;protein_id=WP_001007166.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3381406 3383016 . - . ID=gene-CCO47_RS16665;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=CCO47_RS16665;old_locus_tag=CCO47_16665 NZ_CP075113.1 Protein Homology CDS 3381406 3383016 . - 0 ID=cds-WP_001222457.1;Parent=gene-CCO47_RS16665;Dbxref=GenBank:WP_001222457.1;Name=WP_001222457.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459588.1;locus_tag=CCO47_RS16665;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_001222457.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3383026 3384201 . - . ID=gene-CCO47_RS16670;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=CCO47_RS16670;old_locus_tag=CCO47_16670 NZ_CP075113.1 Protein Homology CDS 3383026 3384201 . - 0 ID=cds-WP_000367604.1;Parent=gene-CCO47_RS16670;Dbxref=GenBank:WP_000367604.1;Name=WP_000367604.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=CCO47_RS16670;product=isochorismate synthase EntC;protein_id=WP_000367604.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3384510 3385466 . + . ID=gene-CCO47_RS16675;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=CCO47_RS16675;old_locus_tag=CCO47_16675 NZ_CP075113.1 Protein Homology CDS 3384510 3385466 . + 0 ID=cds-WP_001238987.1;Parent=gene-CCO47_RS16675;Dbxref=GenBank:WP_001238987.1;Name=WP_001238987.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459586.1;locus_tag=CCO47_RS16675;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_001238987.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3385529 3386773 . - . ID=gene-CCO47_RS16680;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=CCO47_RS16680;old_locus_tag=CCO47_16680 NZ_CP075113.1 Protein Homology CDS 3385529 3386773 . - 0 ID=cds-WP_001081658.1;Parent=gene-CCO47_RS16680;Dbxref=GenBank:WP_001081658.1;Name=WP_001081658.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=CCO47_RS16680;product=enterobactin transporter EntS;protein_id=WP_001081658.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3386884 3387891 . + . ID=gene-CCO47_RS16685;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=CCO47_RS16685;old_locus_tag=CCO47_16685 NZ_CP075113.1 Protein Homology CDS 3386884 3387891 . + 0 ID=cds-WP_001277879.1;Parent=gene-CCO47_RS16685;Dbxref=GenBank:WP_001277879.1;Name=WP_001277879.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459584.1;locus_tag=CCO47_RS16685;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_001277879.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3387891 3388880 . + . ID=gene-CCO47_RS16690;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=CCO47_RS16690;old_locus_tag=CCO47_16690 NZ_CP075113.1 Protein Homology CDS 3387891 3388880 . + 0 ID=cds-WP_000480061.1;Parent=gene-CCO47_RS16690;Dbxref=GenBank:WP_000480061.1;Name=WP_000480061.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459583.1;locus_tag=CCO47_RS16690;product=iron-enterobactin ABC transporter permease;protein_id=WP_000480061.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3388877 3389671 . + . ID=gene-CCO47_RS16695;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=CCO47_RS16695;old_locus_tag=CCO47_16695 NZ_CP075113.1 Protein Homology CDS 3388877 3389671 . + 0 ID=cds-WP_000140620.1;Parent=gene-CCO47_RS16695;Dbxref=GenBank:WP_000140620.1;Name=WP_000140620.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459582.1;locus_tag=CCO47_RS16695;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_000140620.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3389724 3390860 . - . ID=gene-CCO47_RS16700;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=CCO47_RS16700;old_locus_tag=CCO47_16700 NZ_CP075113.1 Protein Homology CDS 3389724 3390860 . - 0 ID=cds-WP_001139582.1;Parent=gene-CCO47_RS16700;Dbxref=GenBank:WP_001139582.1;Name=WP_001139582.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=CCO47_RS16700;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_001139582.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3391110 3394994 . - . ID=gene-CCO47_RS16705;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=CCO47_RS16705;old_locus_tag=CCO47_16705 NZ_CP075113.1 Protein Homology CDS 3391110 3394994 . - 0 ID=cds-WP_000194135.1;Parent=gene-CCO47_RS16705;Dbxref=GenBank:WP_000194135.1;Name=WP_000194135.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=CCO47_RS16705;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_000194135.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3394991 3395209 . - . ID=gene-CCO47_RS16710;Name=CCO47_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16710;old_locus_tag=CCO47_16710 NZ_CP075113.1 Protein Homology CDS 3394991 3395209 . - 0 ID=cds-WP_000396012.1;Parent=gene-CCO47_RS16710;Dbxref=GenBank:WP_000396012.1;Name=WP_000396012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459579.1;locus_tag=CCO47_RS16710;product=MbtH family protein;protein_id=WP_000396012.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3395240 3396454 . - . ID=gene-CCO47_RS16715;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=CCO47_RS16715;old_locus_tag=CCO47_16715 NZ_CP075113.1 Protein Homology CDS 3395240 3396454 . - 0 ID=cds-WP_000656609.1;Parent=gene-CCO47_RS16715;Dbxref=GenBank:WP_000656609.1;Name=WP_000656609.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=CCO47_RS16715;product=enterochelin esterase;protein_id=WP_000656609.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3396643 3398898 . + . ID=gene-CCO47_RS16720;Name=CCO47_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16720;old_locus_tag=CCO47_16720 NZ_CP075113.1 Protein Homology CDS 3396643 3398898 . + 0 ID=cds-WP_001034966.1;Parent=gene-CCO47_RS16720;Dbxref=GenBank:WP_001034966.1;Name=WP_001034966.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459577.1;locus_tag=CCO47_RS16720;product=TonB-dependent siderophore receptor;protein_id=WP_001034966.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3398945 3399649 . + . ID=gene-CCO47_RS16725;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=CCO47_RS16725;old_locus_tag=CCO47_16725 NZ_CP075113.1 Protein Homology CDS 3398945 3399649 . + 0 ID=cds-WP_001260568.1;Parent=gene-CCO47_RS16725;Dbxref=GenBank:WP_001260568.1;Name=WP_001260568.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459576.1;locus_tag=CCO47_RS16725;product=enterobactin synthase subunit EntD;protein_id=WP_001260568.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3399661 3400779 . + . ID=gene-CCO47_RS16730;Name=CCO47_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16730;old_locus_tag=CCO47_16730 NZ_CP075113.1 Protein Homology CDS 3399661 3400779 . + 0 ID=cds-WP_001196902.1;Parent=gene-CCO47_RS16730;Dbxref=GenBank:WP_001196902.1;Name=WP_001196902.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=CCO47_RS16730;product=YbdK family carboxylate-amine ligase;protein_id=WP_001196902.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3400846 3401094 . + . ID=gene-CCO47_RS16735;Name=CCO47_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16735;old_locus_tag=CCO47_16735 NZ_CP075113.1 Protein Homology CDS 3400846 3401094 . + 0 ID=cds-WP_000682497.1;Parent=gene-CCO47_RS16735;Dbxref=GenBank:WP_000682497.1;Name=WP_000682497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459574.1;locus_tag=CCO47_RS16735;product=DUF1158 family protein;protein_id=WP_000682497.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3401100 3401441 . - . ID=gene-CCO47_RS16740;Name=CCO47_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16740;old_locus_tag=CCO47_16740 NZ_CP075113.1 Protein Homology CDS 3401100 3401441 . - 0 ID=cds-WP_000155633.1;Parent=gene-CCO47_RS16740;Dbxref=GenBank:WP_000155633.1;Name=WP_000155633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459573.1;locus_tag=CCO47_RS16740;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WP_000155633.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3401730 3402311 . + . ID=gene-CCO47_RS16745;Name=CCO47_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16745;old_locus_tag=CCO47_16745 NZ_CP075113.1 Protein Homology CDS 3401730 3402311 . + 0 ID=cds-WP_000113613.1;Parent=gene-CCO47_RS16745;Dbxref=GenBank:WP_000113613.1;Name=WP_000113613.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459572.1;locus_tag=CCO47_RS16745;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000113613.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3402311 3402679 . + . ID=gene-CCO47_RS16750;Name=CCO47_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16750;old_locus_tag=CCO47_16750 NZ_CP075113.1 Protein Homology CDS 3402311 3402679 . + 0 ID=cds-WP_000348989.1;Parent=gene-CCO47_RS16750;Dbxref=GenBank:WP_000348989.1;Name=WP_000348989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459571.1;locus_tag=CCO47_RS16750;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000348989.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3402776 3403429 . + . ID=gene-CCO47_RS16755;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=CCO47_RS16755;old_locus_tag=CCO47_16755 NZ_CP075113.1 Protein Homology CDS 3402776 3403429 . + 0 ID=cds-WP_000355879.1;Parent=gene-CCO47_RS16755;Dbxref=GenBank:WP_000355879.1;Name=WP_000355879.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459570.1;locus_tag=CCO47_RS16755;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_000355879.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3403695 3405681 . - . ID=gene-CCO47_RS16760;Name=CCO47_RS16760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS16760;old_locus_tag=CCO47_16760;pseudo=true NZ_CP075113.1 Protein Homology CDS 3403695 3405681 . - 0 ID=cds-CCO47_RS16760;Parent=gene-CCO47_RS16760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=CCO47_RS16760;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3405992 3407239 . + . ID=gene-CCO47_RS16765;Name=CCO47_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16765;old_locus_tag=CCO47_16765 NZ_CP075113.1 Protein Homology CDS 3405992 3407239 . + 0 ID=cds-WP_001156971.1;Parent=gene-CCO47_RS16765;Dbxref=GenBank:WP_001156971.1;Name=WP_001156971.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459561.1;locus_tag=CCO47_RS16765;product=mechanosensitive ion channel family protein;protein_id=WP_001156971.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3407281 3408675 . - . ID=gene-CCO47_RS16770;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=CCO47_RS16770;old_locus_tag=CCO47_16770 NZ_CP075113.1 Protein Homology CDS 3407281 3408675 . - 0 ID=cds-WP_000786288.1;Parent=gene-CCO47_RS16770;Dbxref=GenBank:WP_000786288.1;Name=WP_000786288.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=CCO47_RS16770;product=phenylalanine transporter;protein_id=WP_000786288.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3409001 3410176 . + . ID=gene-CCO47_RS16775;Name=CCO47_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16775;old_locus_tag=CCO47_16775 NZ_CP075113.1 Protein Homology CDS 3409001 3410176 . + 0 ID=cds-WP_001033453.1;Parent=gene-CCO47_RS16775;Dbxref=GenBank:WP_001033453.1;Name=WP_001033453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=CCO47_RS16775;product=coiled-coil domain-containing protein;protein_id=WP_001033453.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3410263 3410823 . - . ID=gene-CCO47_RS16780;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=CCO47_RS16780;old_locus_tag=CCO47_16780 NZ_CP075113.1 Protein Homology CDS 3410263 3410823 . - 0 ID=cds-WP_000362181.1;Parent=gene-CCO47_RS16780;Dbxref=GenBank:WP_000362181.1;Name=WP_000362181.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459558.1;locus_tag=CCO47_RS16780;product=reactive chlorine resistance membrane protein RclC;protein_id=WP_000362181.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3410836 3411072 . - . ID=gene-CCO47_RS16785;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=CCO47_RS16785;old_locus_tag=CCO47_16785 NZ_CP075113.1 Protein Homology CDS 3410836 3411072 . - 0 ID=cds-WP_000922173.1;Parent=gene-CCO47_RS16785;Dbxref=GenBank:WP_000922173.1;Name=WP_000922173.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459557.1;locus_tag=CCO47_RS16785;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WP_000922173.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3411229 3412554 . - . ID=gene-CCO47_RS16790;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=CCO47_RS16790;old_locus_tag=CCO47_16790 NZ_CP075113.1 Protein Homology CDS 3411229 3412554 . - 0 ID=cds-WP_000195929.1;Parent=gene-CCO47_RS16790;Dbxref=GenBank:WP_000195929.1;Name=WP_000195929.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=CCO47_RS16790;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WP_000195929.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3412770 3413624 . + . ID=gene-CCO47_RS16795;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=CCO47_RS16795;old_locus_tag=CCO47_16795 NZ_CP075113.1 Protein Homology CDS 3412770 3413624 . + 0 ID=cds-WP_000339632.1;Parent=gene-CCO47_RS16795;Dbxref=GenBank:WP_000339632.1;Name=WP_000339632.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459555.1;locus_tag=CCO47_RS16795;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WP_000339632.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3413675 3413914 . - . ID=gene-CCO47_RS16800;Name=CCO47_RS16800;end_range=3413914,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS16800;old_locus_tag=CCO47_16800;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 3413675 3413914 . - 0 ID=cds-CCO47_RS16800;Parent=gene-CCO47_RS16800;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=3413914,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000574020.1;locus_tag=CCO47_RS16800;partial=true;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3413918 3414292 . + . ID=gene-CCO47_RS16805;Name=CCO47_RS16805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS16805;old_locus_tag=CCO47_16805;partial=true;pseudo=true;start_range=.,3413918 NZ_CP075113.1 Protein Homology CDS 3413918 3414292 . + 0 ID=cds-CCO47_RS16805;Parent=gene-CCO47_RS16805;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635961.1;locus_tag=CCO47_RS16805;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,3413918;transl_table=11 NZ_CP075113.1 RefSeq gene 3414492 3414737 . + . ID=gene-CCO47_RS16810;Name=CCO47_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16810;old_locus_tag=CCO47_16810 NZ_CP075113.1 Protein Homology CDS 3414492 3414737 . + 0 ID=cds-WP_000445907.1;Parent=gene-CCO47_RS16810;Dbxref=GenBank:WP_000445907.1;Name=WP_000445907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000230236.1;locus_tag=CCO47_RS16810;product=hypothetical protein;protein_id=WP_000445907.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3415162 3415524 . + . ID=gene-CCO47_RS16815;Name=CCO47_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16815;old_locus_tag=CCO47_16815 NZ_CP075113.1 Protein Homology CDS 3415162 3415524 . + 0 ID=cds-WP_000915523.1;Parent=gene-CCO47_RS16815;Dbxref=GenBank:WP_000915523.1;Name=WP_000915523.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459552.1;locus_tag=CCO47_RS16815;product=GtrA family protein;protein_id=WP_000915523.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3415521 3416447 . + . ID=gene-CCO47_RS16820;Name=CCO47_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16820;old_locus_tag=CCO47_16820 NZ_CP075113.1 Protein Homology CDS 3415521 3416447 . + 0 ID=cds-WP_000703618.1;Parent=gene-CCO47_RS16820;Dbxref=GenBank:WP_000703618.1;Name=WP_000703618.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459551.1;locus_tag=CCO47_RS16820;product=glycosyltransferase family 2 protein;protein_id=WP_000703618.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3416428 3418080 . + . ID=gene-CCO47_RS16825;Name=gtrC1;gbkey=Gene;gene=gtrC1;gene_biotype=protein_coding;locus_tag=CCO47_RS16825;old_locus_tag=CCO47_16825 NZ_CP075113.1 Protein Homology CDS 3416428 3418080 . + 0 ID=cds-WP_001575778.1;Parent=gene-CCO47_RS16825;Dbxref=GenBank:WP_001575778.1;Name=WP_001575778.1;gbkey=CDS;gene=gtrC1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459550.1;locus_tag=CCO47_RS16825;product=putative glucosyltransferase GtrC1;protein_id=WP_001575778.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3418467 3418723 . + . ID=gene-CCO47_RS24235;Name=CCO47_RS24235;end_range=3418723,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24235;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 3418467 3418723 . + 0 ID=cds-CCO47_RS24235;Parent=gene-CCO47_RS24235;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=3418723,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_196249857.1;locus_tag=CCO47_RS24235;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3418756 3419134 . + . ID=gene-CCO47_RS24240;Name=CCO47_RS24240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24240;partial=true;pseudo=true;start_range=.,3418756 NZ_CP075113.1 Protein Homology CDS 3418756 3419134 . + 0 ID=cds-CCO47_RS24240;Parent=gene-CCO47_RS24240;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612005.1;locus_tag=CCO47_RS24240;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,3418756;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3419103 3419201 . + . ID=gene-CCO47_RS24465;Name=CCO47_RS24465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24465;partial=true;pseudo=true;start_range=.,3419103 NZ_CP075113.1 Protein Homology CDS 3419103 3419201 . + 0 ID=cds-CCO47_RS24465;Parent=gene-CCO47_RS24465;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415069.1;locus_tag=CCO47_RS24465;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3419103;transl_table=11 NZ_CP075113.1 RefSeq gene 3419564 3419926 . + . ID=gene-CCO47_RS16835;Name=CCO47_RS16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16835;old_locus_tag=CCO47_16835 NZ_CP075113.1 Protein Homology CDS 3419564 3419926 . + 0 ID=cds-WP_000915528.1;Parent=gene-CCO47_RS16835;Dbxref=GenBank:WP_000915528.1;Name=WP_000915528.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459552.1;locus_tag=CCO47_RS16835;product=GtrA family protein;protein_id=WP_000915528.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3419923 3420855 . + . ID=gene-CCO47_RS16840;Name=CCO47_RS16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16840;old_locus_tag=CCO47_16840 NZ_CP075113.1 Protein Homology CDS 3419923 3420855 . + 0 ID=cds-WP_000703639.1;Parent=gene-CCO47_RS16840;Dbxref=GenBank:WP_000703639.1;Name=WP_000703639.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016048813.1;locus_tag=CCO47_RS16840;product=glycosyltransferase family 2 protein;protein_id=WP_000703639.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3420845 3422302 . + . ID=gene-CCO47_RS16845;Name=CCO47_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16845;old_locus_tag=CCO47_16845 NZ_CP075113.1 Protein Homology CDS 3420845 3422302 . + 0 ID=cds-WP_000671499.1;Parent=gene-CCO47_RS16845;Dbxref=GenBank:WP_000671499.1;Name=WP_000671499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835885.1;locus_tag=CCO47_RS16845;product=glucosyltransferase domain-containing protein;protein_id=WP_000671499.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3422361 3424364 . - . ID=gene-CCO47_RS16850;Name=CCO47_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16850;old_locus_tag=CCO47_16850 NZ_CP075113.1 Protein Homology CDS 3422361 3424364 . - 0 ID=cds-WP_000129929.1;Parent=gene-CCO47_RS16850;Dbxref=GenBank:WP_000129929.1;Name=WP_000129929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016048838.1;locus_tag=CCO47_RS16850;product=tail spike protein;protein_id=WP_000129929.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3424500 3424751 . + . ID=gene-CCO47_RS16855;Name=CCO47_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16855;old_locus_tag=CCO47_16855 NZ_CP075113.1 Protein Homology CDS 3424500 3424751 . + 0 ID=cds-WP_000532175.1;Parent=gene-CCO47_RS16855;Dbxref=GenBank:WP_000532175.1;Name=WP_000532175.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000532175.1;locus_tag=CCO47_RS16855;product=Arc family DNA-binding protein;protein_id=WP_000532175.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3424851 3425030 . + . ID=gene-CCO47_RS16860;Name=CCO47_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16860;old_locus_tag=CCO47_16860 NZ_CP075113.1 Protein Homology CDS 3424851 3425030 . + 0 ID=cds-WP_001085430.1;Parent=gene-CCO47_RS16860;Dbxref=GenBank:WP_001085430.1;Name=WP_001085430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001085430.1;locus_tag=CCO47_RS16860;product=hypothetical protein;protein_id=WP_001085430.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3425044 3425409 . - . ID=gene-CCO47_RS16865;Name=CCO47_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16865;old_locus_tag=CCO47_16865 NZ_CP075113.1 Protein Homology CDS 3425044 3425409 . - 0 ID=cds-WP_000757527.1;Parent=gene-CCO47_RS16865;Dbxref=GenBank:WP_000757527.1;Name=WP_000757527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000757527.1;locus_tag=CCO47_RS16865;product=hypothetical protein;protein_id=WP_000757527.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3425440 3425769 . + . ID=gene-CCO47_RS16870;Name=CCO47_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16870;old_locus_tag=CCO47_16870 NZ_CP075113.1 Protein Homology CDS 3425440 3425769 . + 0 ID=cds-WP_000889769.1;Parent=gene-CCO47_RS16870;Dbxref=GenBank:WP_000889769.1;Name=WP_000889769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000889769.1;locus_tag=CCO47_RS16870;product=hypothetical protein;protein_id=WP_000889769.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3425787 3427700 . - . ID=gene-CCO47_RS16875;Name=CCO47_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16875;old_locus_tag=CCO47_16875 NZ_CP075113.1 Protein Homology CDS 3425787 3427700 . - 0 ID=cds-WP_001262317.1;Parent=gene-CCO47_RS16875;Dbxref=GenBank:WP_001262317.1;Name=WP_001262317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001262317.1;locus_tag=CCO47_RS16875;product=P22-gp16 family phage DNA ejection protein;protein_id=WP_001262317.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3427700 3429004 . - . ID=gene-CCO47_RS16880;Name=CCO47_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16880;old_locus_tag=CCO47_16880 NZ_CP075113.1 Protein Homology CDS 3427700 3429004 . - 0 ID=cds-WP_000246968.1;Parent=gene-CCO47_RS16880;Dbxref=GenBank:WP_000246968.1;Name=WP_000246968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015973870.1;locus_tag=CCO47_RS16880;product=DNA transfer protein;protein_id=WP_000246968.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3429015 3429704 . - . ID=gene-CCO47_RS16885;Name=CCO47_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16885;old_locus_tag=CCO47_16885 NZ_CP075113.1 Protein Homology CDS 3429015 3429704 . - 0 ID=cds-WP_000964898.1;Parent=gene-CCO47_RS16885;Dbxref=GenBank:WP_000964898.1;Name=WP_000964898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706179.1;locus_tag=CCO47_RS16885;product=hypothetical protein;protein_id=WP_000964898.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3429707 3430162 . - . ID=gene-CCO47_RS16890;Name=CCO47_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16890;old_locus_tag=CCO47_16890 NZ_CP075113.1 Protein Homology CDS 3429707 3430162 . - 0 ID=cds-WP_000627695.1;Parent=gene-CCO47_RS16890;Dbxref=GenBank:WP_000627695.1;Name=WP_000627695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706178.2;locus_tag=CCO47_RS16890;product=DUF2824 family protein;protein_id=WP_000627695.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3430162 3430863 . - . ID=gene-CCO47_RS16895;Name=CCO47_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16895;old_locus_tag=CCO47_16895 NZ_CP075113.1 Protein Homology CDS 3430162 3430863 . - 0 ID=cds-WP_000774923.1;Parent=gene-CCO47_RS16895;Dbxref=GenBank:WP_000774923.1;Name=WP_000774923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774926.1;locus_tag=CCO47_RS16895;product=coiled-coil domain-containing protein;protein_id=WP_000774923.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3430867 3432285 . - . ID=gene-CCO47_RS16900;Name=CCO47_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16900;old_locus_tag=CCO47_16900 NZ_CP075113.1 Protein Homology CDS 3430867 3432285 . - 0 ID=cds-WP_001122417.1;Parent=gene-CCO47_RS16900;Dbxref=GenBank:WP_001122417.1;Name=WP_001122417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706176.1;locus_tag=CCO47_RS16900;product=packaged DNA stabilization protein gp10;protein_id=WP_001122417.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3432245 3432745 . - . ID=gene-CCO47_RS16905;Name=CCO47_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16905;old_locus_tag=CCO47_16905 NZ_CP075113.1 Protein Homology CDS 3432245 3432745 . - 0 ID=cds-WP_001166101.1;Parent=gene-CCO47_RS16905;Dbxref=GenBank:WP_001166101.1;Name=WP_001166101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015975196.1;locus_tag=CCO47_RS16905;product=packaged DNA stabilization gp4 family protein;protein_id=WP_001166101.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3432729 3433289 . - . ID=gene-CCO47_RS16910;Name=CCO47_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16910;old_locus_tag=CCO47_16910 NZ_CP075113.1 Protein Homology CDS 3432729 3433289 . - 0 ID=cds-WP_000538677.1;Parent=gene-CCO47_RS16910;Dbxref=GenBank:WP_000538677.1;Name=WP_000538677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000538670.1;locus_tag=CCO47_RS16910;product=WDGH domain-containing protein;protein_id=WP_000538677.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3433330 3434622 . - . ID=gene-CCO47_RS16915;Name=CCO47_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16915;old_locus_tag=CCO47_16915 NZ_CP075113.1 Protein Homology CDS 3433330 3434622 . - 0 ID=cds-WP_001196933.1;Parent=gene-CCO47_RS16915;Dbxref=GenBank:WP_001196933.1;Name=WP_001196933.1;Ontology_term=GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015995280.1;locus_tag=CCO47_RS16915;product=P22 phage gp5 family major capsid protein;protein_id=WP_001196933.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3434622 3435533 . - . ID=gene-CCO47_RS16920;Name=CCO47_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16920;old_locus_tag=CCO47_16920 NZ_CP075113.1 Protein Homology CDS 3434622 3435533 . - 0 ID=cds-WP_000433856.1;Parent=gene-CCO47_RS16920;Dbxref=GenBank:WP_000433856.1;Name=WP_000433856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706172.1;locus_tag=CCO47_RS16920;product=scaffold protein;protein_id=WP_000433856.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3435547 3437724 . - . ID=gene-CCO47_RS16925;Name=CCO47_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16925;old_locus_tag=CCO47_16925 NZ_CP075113.1 Protein Homology CDS 3435547 3437724 . - 0 ID=cds-WP_000774659.1;Parent=gene-CCO47_RS16925;Dbxref=GenBank:WP_000774659.1;Name=WP_000774659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706171.2;locus_tag=CCO47_RS16925;product=portal protein;protein_id=WP_000774659.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3437724 3439223 . - . ID=gene-CCO47_RS16930;Name=CCO47_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16930;old_locus_tag=CCO47_16930 NZ_CP075113.1 Protein Homology CDS 3437724 3439223 . - 0 ID=cds-WP_000417865.1;Parent=gene-CCO47_RS16930;Dbxref=GenBank:WP_000417865.1;Name=WP_000417865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000417856.1;locus_tag=CCO47_RS16930;product=terminase large subunit;protein_id=WP_000417865.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3439201 3439689 . - . ID=gene-CCO47_RS16935;Name=CCO47_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16935;old_locus_tag=CCO47_16935 NZ_CP075113.1 Protein Homology CDS 3439201 3439689 . - 0 ID=cds-WP_000729924.1;Parent=gene-CCO47_RS16935;Dbxref=GenBank:WP_000729924.1;Name=WP_000729924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729926.1;locus_tag=CCO47_RS16935;product=DNA-packaging protein;protein_id=WP_000729924.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3439693 3440097 . - . ID=gene-CCO47_RS16940;Name=CCO47_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16940;old_locus_tag=CCO47_16940 NZ_CP075113.1 Protein Homology CDS 3439693 3440097 . - 0 ID=cds-WP_000013072.1;Parent=gene-CCO47_RS16940;Dbxref=GenBank:WP_000013072.1;Name=WP_000013072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000013072.1;locus_tag=CCO47_RS16940;product=hypothetical protein;protein_id=WP_000013072.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3440097 3440486 . - . ID=gene-CCO47_RS16945;Name=CCO47_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16945;old_locus_tag=CCO47_16945 NZ_CP075113.1 Protein Homology CDS 3440097 3440486 . - 0 ID=cds-WP_001140560.1;Parent=gene-CCO47_RS16945;Dbxref=GenBank:WP_001140560.1;Name=WP_001140560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750863.1;locus_tag=CCO47_RS16945;product=hypothetical protein;protein_id=WP_001140560.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3440490 3440732 . - . ID=gene-CCO47_RS16950;Name=CCO47_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16950;old_locus_tag=CCO47_16950 NZ_CP075113.1 Protein Homology CDS 3440490 3440732 . - 0 ID=cds-WP_000807788.1;Parent=gene-CCO47_RS16950;Dbxref=GenBank:WP_000807788.1;Name=WP_000807788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001561773.1;locus_tag=CCO47_RS16950;product=DUF2560 family protein;protein_id=WP_000807788.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3440991 3441521 . - . ID=gene-CCO47_RS16955;Name=CCO47_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16955;old_locus_tag=CCO47_16955 NZ_CP075113.1 Protein Homology CDS 3440991 3441521 . - 0 ID=cds-WP_000877030.1;Parent=gene-CCO47_RS16955;Dbxref=GenBank:WP_000877030.1;Name=WP_000877030.1;Ontology_term=GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000877025.1;locus_tag=CCO47_RS16955;product=KilA-N domain-containing protein;protein_id=WP_000877030.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3441734 3442183 . - . ID=gene-CCO47_RS16960;Name=CCO47_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16960;old_locus_tag=CCO47_16960 NZ_CP075113.1 Protein Homology CDS 3441734 3442183 . - 0 ID=cds-WP_108597125.1;Parent=gene-CCO47_RS16960;Dbxref=GenBank:WP_108597125.1;Name=WP_108597125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540671.1;locus_tag=CCO47_RS16960;product=lysis protein;protein_id=WP_108597125.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3442201 3442638 . - . ID=gene-CCO47_RS16965;Name=CCO47_RS16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16965;old_locus_tag=CCO47_16965 NZ_CP075113.1 Protein Homology CDS 3442201 3442638 . - 0 ID=cds-WP_001167374.1;Parent=gene-CCO47_RS16965;Dbxref=GenBank:WP_001167374.1;Name=WP_001167374.1;Ontology_term=GO:0009253,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001167369.1;locus_tag=CCO47_RS16965;product=lysozyme;protein_id=WP_001167374.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3442622 3442948 . - . ID=gene-CCO47_RS16970;Name=CCO47_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16970;old_locus_tag=CCO47_16970 NZ_CP075113.1 Protein Homology CDS 3442622 3442948 . - 0 ID=cds-WP_000738703.1;Parent=gene-CCO47_RS16970;Dbxref=GenBank:WP_000738703.1;Name=WP_000738703.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000738844.1;locus_tag=CCO47_RS16970;product=phage holin%2C lambda family;protein_id=WP_000738703.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3443328 3443816 . - . ID=gene-CCO47_RS16975;Name=CCO47_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16975;old_locus_tag=CCO47_16975 NZ_CP075113.1 Protein Homology CDS 3443328 3443816 . - 0 ID=cds-WP_000027545.1;Parent=gene-CCO47_RS16975;Dbxref=GenBank:WP_000027545.1;Name=WP_000027545.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027540.1;locus_tag=CCO47_RS16975;product=antiterminator Q family protein;protein_id=WP_000027545.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3443886 3444089 . - . ID=gene-CCO47_RS16980;Name=CCO47_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16980;old_locus_tag=CCO47_16980 NZ_CP075113.1 Protein Homology CDS 3443886 3444089 . - 0 ID=cds-WP_000176947.1;Parent=gene-CCO47_RS16980;Dbxref=GenBank:WP_000176947.1;Name=WP_000176947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000149880.1;locus_tag=CCO47_RS16980;product=phage NinH family protein;protein_id=WP_000176947.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3444086 3444481 . - . ID=gene-CCO47_RS16985;Name=rusA;gbkey=Gene;gene=rusA;gene_biotype=protein_coding;locus_tag=CCO47_RS16985;old_locus_tag=CCO47_16985 NZ_CP075113.1 Protein Homology CDS 3444086 3444481 . - 0 ID=cds-WP_001008211.1;Parent=gene-CCO47_RS16985;Dbxref=GenBank:WP_001008211.1;Name=WP_001008211.1;Ontology_term=GO:0006281,GO:0006310,GO:0000287,GO:0000400,GO:0008821;gbkey=CDS;gene=rusA;go_function=magnesium ion binding|0000287||IEA,four-way junction DNA binding|0000400||IEA,crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015968599.1;locus_tag=CCO47_RS16985;product=crossover junction endodeoxyribonuclease RusA;protein_id=WP_001008211.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3444478 3444759 . - . ID=gene-CCO47_RS24245;Name=CCO47_RS24245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24245 NZ_CP075113.1 Protein Homology CDS 3444478 3444759 . - 0 ID=cds-WP_001218096.1;Parent=gene-CCO47_RS24245;Dbxref=GenBank:WP_001218096.1;Name=WP_001218096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218097.1;locus_tag=CCO47_RS24245;product=hypothetical protein;protein_id=WP_001218096.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3444737 3444913 . - . ID=gene-CCO47_RS16990;Name=CCO47_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16990;old_locus_tag=CCO47_16990 NZ_CP075113.1 Protein Homology CDS 3444737 3444913 . - 0 ID=cds-WP_000566852.1;Parent=gene-CCO47_RS16990;Dbxref=GenBank:WP_000566852.1;Name=WP_000566852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566853.1;locus_tag=CCO47_RS16990;product=protein NinF;protein_id=WP_000566852.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3444910 3445092 . - . ID=gene-CCO47_RS16995;Name=CCO47_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS16995;old_locus_tag=CCO47_16995 NZ_CP075113.1 Protein Homology CDS 3444910 3445092 . - 0 ID=cds-WP_000113760.1;Parent=gene-CCO47_RS16995;Dbxref=GenBank:WP_000113760.1;Name=WP_000113760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016063117.1;locus_tag=CCO47_RS16995;product=NinE family protein;protein_id=WP_000113760.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3445059 3445232 . - . ID=gene-CCO47_RS17000;Name=ninD;gbkey=Gene;gene=ninD;gene_biotype=protein_coding;locus_tag=CCO47_RS17000;old_locus_tag=CCO47_17000 NZ_CP075113.1 Protein Homology CDS 3445059 3445232 . - 0 ID=cds-WP_000679699.1;Parent=gene-CCO47_RS17000;Dbxref=GenBank:WP_000679699.1;Name=WP_000679699.1;gbkey=CDS;gene=ninD;inference=COORDINATES: protein motif:HMM:NF036649.7;locus_tag=CCO47_RS17000;product=protein NinD;protein_id=WP_000679699.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3445229 3446101 . - . ID=gene-CCO47_RS17005;Name=CCO47_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17005;old_locus_tag=CCO47_17005 NZ_CP075113.1 Protein Homology CDS 3445229 3446101 . - 0 ID=cds-WP_001573980.1;Parent=gene-CCO47_RS17005;Dbxref=GenBank:WP_001573980.1;Name=WP_001573980.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000611491.1;locus_tag=CCO47_RS17005;product=phosphoadenosine phosphosulfate reductase domain-containing protein;protein_id=WP_001573980.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3446098 3446538 . - . ID=gene-CCO47_RS17010;Name=CCO47_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17010;old_locus_tag=CCO47_17010 NZ_CP075113.1 Protein Homology CDS 3446098 3446538 . - 0 ID=cds-WP_000736920.1;Parent=gene-CCO47_RS17010;Dbxref=GenBank:WP_000736920.1;Name=WP_000736920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001513013.1;locus_tag=CCO47_RS17010;product=recombination protein NinB;protein_id=WP_000736920.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3446612 3447988 . - . ID=gene-CCO47_RS17015;Name=CCO47_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17015;old_locus_tag=CCO47_17015 NZ_CP075113.1 Protein Homology CDS 3446612 3447988 . - 0 ID=cds-WP_001248409.1;Parent=gene-CCO47_RS17015;Dbxref=GenBank:WP_001248409.1;Name=WP_001248409.1;Ontology_term=GO:0006269,GO:0003677,GO:0003678,GO:0005524,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248398.1;locus_tag=CCO47_RS17015;product=replicative DNA helicase;protein_id=WP_001248409.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3447985 3448818 . - . ID=gene-CCO47_RS17020;Name=CCO47_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17020;old_locus_tag=CCO47_17020 NZ_CP075113.1 Protein Homology CDS 3447985 3448818 . - 0 ID=cds-WP_000067074.1;Parent=gene-CCO47_RS17020;Dbxref=GenBank:WP_000067074.1;Name=WP_000067074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531205.1;locus_tag=CCO47_RS17020;product=replication protein;protein_id=WP_000067074.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3448811 3448957 . - . ID=gene-CCO47_RS17025;Name=CCO47_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17025;old_locus_tag=CCO47_17025 NZ_CP075113.1 Protein Homology CDS 3448811 3448957 . - 0 ID=cds-WP_001125981.1;Parent=gene-CCO47_RS17025;Dbxref=GenBank:WP_001125981.1;Name=WP_001125981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309215.1;locus_tag=CCO47_RS17025;product=DUF2740 family protein;protein_id=WP_001125981.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3448992 3449273 . - . ID=gene-CCO47_RS17030;Name=CCO47_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17030;old_locus_tag=CCO47_17030 NZ_CP075113.1 Protein Homology CDS 3448992 3449273 . - 0 ID=cds-WP_001103492.1;Parent=gene-CCO47_RS17030;Dbxref=GenBank:WP_001103492.1;Name=WP_001103492.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015995142.1;locus_tag=CCO47_RS17030;product=CII family transcriptional regulator;protein_id=WP_001103492.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3449384 3449599 . - . ID=gene-CCO47_RS17035;Name=CCO47_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17035;old_locus_tag=CCO47_17035 NZ_CP075113.1 Protein Homology CDS 3449384 3449599 . - 0 ID=cds-WP_000182204.1;Parent=gene-CCO47_RS17035;Dbxref=GenBank:WP_000182204.1;Name=WP_000182204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000182204.1;locus_tag=CCO47_RS17035;product=transcriptional regulator;protein_id=WP_000182204.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3449710 3450399 . + . ID=gene-CCO47_RS17040;Name=CCO47_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17040;old_locus_tag=CCO47_17040 NZ_CP075113.1 Protein Homology CDS 3449710 3450399 . + 0 ID=cds-WP_000712403.1;Parent=gene-CCO47_RS17040;Dbxref=GenBank:WP_000712403.1;Name=WP_000712403.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000712403.1;locus_tag=CCO47_RS17040;product=XRE family transcriptional regulator;protein_id=WP_000712403.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3450488 3451411 . + . ID=gene-CCO47_RS17045;Name=CCO47_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17045;old_locus_tag=CCO47_17045 NZ_CP075113.1 Protein Homology CDS 3450488 3451411 . + 0 ID=cds-WP_000248006.1;Parent=gene-CCO47_RS17045;Dbxref=GenBank:WP_000248006.1;Name=WP_000248006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000248006.1;locus_tag=CCO47_RS17045;product=BstA C-terminal domain-containing protein;protein_id=WP_000248006.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3451447 3451656 . - . ID=gene-CCO47_RS17050;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=CCO47_RS17050;old_locus_tag=CCO47_17050 NZ_CP075113.1 Protein Homology CDS 3451447 3451656 . - 0 ID=cds-WP_000786969.1;Parent=gene-CCO47_RS17050;Dbxref=GenBank:WP_000786969.1;Name=WP_000786969.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000786965.1;locus_tag=CCO47_RS17050;product=fumarate hydratase FumD;protein_id=WP_000786969.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3452020 3452352 . + . ID=gene-CCO47_RS17055;Name=CCO47_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17055;old_locus_tag=CCO47_17055 NZ_CP075113.1 Protein Homology CDS 3452020 3452352 . + 0 ID=cds-WP_000216172.1;Parent=gene-CCO47_RS17055;Dbxref=GenBank:WP_000216172.1;Name=WP_000216172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006786547.1;locus_tag=CCO47_RS17055;product=transcriptional antitermination N peptide;protein_id=WP_000216172.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3452431 3452631 . + . ID=gene-CCO47_RS17060;Name=CCO47_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17060;old_locus_tag=CCO47_17060 NZ_CP075113.1 Protein Homology CDS 3452431 3452631 . + 0 ID=cds-WP_000246164.1;Parent=gene-CCO47_RS17060;Dbxref=GenBank:WP_000246164.1;Name=WP_000246164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213972.1;locus_tag=CCO47_RS17060;product=antirestriction Ral family protein;protein_id=WP_000246164.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3452671 3452970 . + . ID=gene-CCO47_RS17065;Name=CCO47_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17065;old_locus_tag=CCO47_17065 NZ_CP075113.1 Protein Homology CDS 3452671 3452970 . + 0 ID=cds-WP_001751411.1;Parent=gene-CCO47_RS17065;Dbxref=GenBank:WP_001751411.1;Name=WP_001751411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750236.1;locus_tag=CCO47_RS17065;product=XkdD/Y8K6 family phage-associated protein;protein_id=WP_001751411.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3452970 3453095 . + . ID=gene-CCO47_RS24250;Name=CCO47_RS24250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24250 NZ_CP075113.1 Protein Homology CDS 3452970 3453095 . + 0 ID=cds-WP_000405108.1;Parent=gene-CCO47_RS24250;Dbxref=GenBank:WP_000405108.1;Name=WP_000405108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000405108.1;locus_tag=CCO47_RS24250;product=hypothetical protein;protein_id=WP_000405108.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3453294 3453434 . + . ID=gene-CCO47_RS17070;Name=CCO47_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17070;old_locus_tag=CCO47_17070 NZ_CP075113.1 Protein Homology CDS 3453294 3453434 . + 0 ID=cds-WP_001200016.1;Parent=gene-CCO47_RS17070;Dbxref=GenBank:WP_001200016.1;Name=WP_001200016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200014.1;locus_tag=CCO47_RS17070;product=protease FtsH-inhibitory lysogeny factor CIII;protein_id=WP_001200016.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3453427 3453540 . + . ID=gene-CCO47_RS17075;Name=kil;gbkey=Gene;gene=kil;gene_biotype=protein_coding;locus_tag=CCO47_RS17075;old_locus_tag=CCO47_17075 NZ_CP075113.1 Protein Homology CDS 3453427 3453540 . + 0 ID=cds-WP_000361564.1;Parent=gene-CCO47_RS17075;Dbxref=GenBank:WP_000361564.1;Name=WP_000361564.1;gbkey=CDS;gene=kil;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361565.1;locus_tag=CCO47_RS17075;product=host cell division inhibitory peptide Kil;protein_id=WP_000361564.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3453537 3453725 . + . ID=gene-CCO47_RS24255;Name=CCO47_RS24255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24255 NZ_CP075113.1 Protein Homology CDS 3453537 3453725 . + 0 ID=cds-WP_001552364.1;Parent=gene-CCO47_RS24255;Dbxref=GenBank:WP_001552364.1;Name=WP_001552364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015976819.1;locus_tag=CCO47_RS24255;product=hypothetical protein;protein_id=WP_001552364.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3453734 3454441 . + . ID=gene-CCO47_RS17080;Name=CCO47_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17080;old_locus_tag=CCO47_17080 NZ_CP075113.1 Protein Homology CDS 3453734 3454441 . + 0 ID=cds-WP_000365270.1;Parent=gene-CCO47_RS17080;Dbxref=GenBank:WP_000365270.1;Name=WP_000365270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231971.1;locus_tag=CCO47_RS17080;product=Rad52/Rad22 family DNA repair protein;protein_id=WP_000365270.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3454442 3454948 . + . ID=gene-CCO47_RS17085;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=CCO47_RS17085;old_locus_tag=CCO47_17085 NZ_CP075113.1 Protein Homology CDS 3454442 3454948 . + 0 ID=cds-WP_000168282.1;Parent=gene-CCO47_RS17085;Dbxref=GenBank:WP_000168282.1;Name=WP_000168282.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168270.1;locus_tag=CCO47_RS17085;product=single-stranded DNA-binding protein;protein_id=WP_000168282.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3454957 3455505 . + . ID=gene-CCO47_RS17090;Name=CCO47_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17090;old_locus_tag=CCO47_17090 NZ_CP075113.1 Protein Homology CDS 3454957 3455505 . + 0 ID=cds-WP_001016182.1;Parent=gene-CCO47_RS17090;Dbxref=GenBank:WP_001016182.1;Name=WP_001016182.1;Ontology_term=GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016248935.1;locus_tag=CCO47_RS17090;product=3'-5' exonuclease;protein_id=WP_001016182.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3455521 3455814 . + . ID=gene-CCO47_RS17095;Name=CCO47_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17095;old_locus_tag=CCO47_17095 NZ_CP075113.1 Protein Homology CDS 3455521 3455814 . + 0 ID=cds-WP_001111323.1;Parent=gene-CCO47_RS17095;Dbxref=GenBank:WP_001111323.1;Name=WP_001111323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001111277.1;locus_tag=CCO47_RS17095;product=phage anti-RecBCD protein;protein_id=WP_001111323.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3455825 3455995 . + . ID=gene-CCO47_RS17100;Name=CCO47_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17100;old_locus_tag=CCO47_17100 NZ_CP075113.1 Protein Homology CDS 3455825 3455995 . + 0 ID=cds-WP_001214770.1;Parent=gene-CCO47_RS17100;Dbxref=GenBank:WP_001214770.1;Name=WP_001214770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001214771.1;locus_tag=CCO47_RS17100;product=DUF2737 family protein;protein_id=WP_001214770.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3455992 3456573 . + . ID=gene-CCO47_RS17105;Name=CCO47_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17105;old_locus_tag=CCO47_17105 NZ_CP075113.1 Protein Homology CDS 3455992 3456573 . + 0 ID=cds-WP_000665849.1;Parent=gene-CCO47_RS17105;Dbxref=GenBank:WP_000665849.1;Name=WP_000665849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000665849.1;locus_tag=CCO47_RS17105;product=hypothetical protein;protein_id=WP_000665849.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3456958 3457251 . + . ID=gene-CCO47_RS17110;Name=CCO47_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17110;old_locus_tag=CCO47_17110 NZ_CP075113.1 Protein Homology CDS 3456958 3457251 . + 0 ID=cds-WP_000267992.1;Parent=gene-CCO47_RS17110;Dbxref=GenBank:WP_000267992.1;Name=WP_000267992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000267992.1;locus_tag=CCO47_RS17110;product=hypothetical protein;protein_id=WP_000267992.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3457248 3458330 . + . ID=gene-CCO47_RS17115;Name=CCO47_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17115;old_locus_tag=CCO47_17115 NZ_CP075113.1 Protein Homology CDS 3457248 3458330 . + 0 ID=cds-WP_000208077.1;Parent=gene-CCO47_RS17115;Dbxref=GenBank:WP_000208077.1;Name=WP_000208077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000208077.1;locus_tag=CCO47_RS17115;product=dATP/dGTP pyrophosphohydrolase domain-containing protein;protein_id=WP_000208077.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3458323 3458604 . + . ID=gene-CCO47_RS17120;Name=CCO47_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17120;old_locus_tag=CCO47_17120 NZ_CP075113.1 Protein Homology CDS 3458323 3458604 . + 0 ID=cds-WP_000002089.1;Parent=gene-CCO47_RS17120;Dbxref=GenBank:WP_000002089.1;Name=WP_000002089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576840.1;locus_tag=CCO47_RS17120;product=hypothetical protein;protein_id=WP_000002089.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3458698 3458997 . + . ID=gene-CCO47_RS17125;Name=CCO47_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17125;old_locus_tag=CCO47_17125 NZ_CP075113.1 Protein Homology CDS 3458698 3458997 . + 0 ID=cds-WP_001447403.1;Parent=gene-CCO47_RS17125;Dbxref=GenBank:WP_001447403.1;Name=WP_001447403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309189.2;locus_tag=CCO47_RS17125;product=hypothetical protein;protein_id=WP_001447403.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3459075 3459419 . + . ID=gene-CCO47_RS17130;Name=CCO47_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17130;old_locus_tag=CCO47_17130 NZ_CP075113.1 Protein Homology CDS 3459075 3459419 . + 0 ID=cds-WP_001281201.1;Parent=gene-CCO47_RS17130;Dbxref=GenBank:WP_001281201.1;Name=WP_001281201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016248831.1;locus_tag=CCO47_RS17130;product=hypothetical protein;protein_id=WP_001281201.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3459422 3459484 . + . ID=gene-CCO47_RS24260;Name=CCO47_RS24260;end_range=3459484,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24260;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 3459422 3459484 . + 0 ID=cds-CCO47_RS24260;Parent=gene-CCO47_RS24260;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3459484,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024139.7;locus_tag=CCO47_RS24260;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3459649 3460812 . + . ID=gene-CCO47_RS17140;Name=CCO47_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17140;old_locus_tag=CCO47_17140 NZ_CP075113.1 Protein Homology CDS 3459649 3460812 . + 0 ID=cds-WP_001573970.1;Parent=gene-CCO47_RS17140;Dbxref=GenBank:WP_001573970.1;Name=WP_001573970.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415069.1;locus_tag=CCO47_RS17140;product=integrase;protein_id=WP_001573970.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3460828 3460904 . - . ID=gene-CCO47_RS17145;Name=CCO47_RS17145;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS17145;old_locus_tag=CCO47_17145 NZ_CP075113.1 tRNAscan-SE tRNA 3460828 3460904 . - . ID=rna-CCO47_RS17145;Parent=gene-CCO47_RS17145;anticodon=(pos:complement(3460868..3460870));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS17145;product=tRNA-Arg NZ_CP075113.1 tRNAscan-SE exon 3460828 3460904 . - . ID=exon-CCO47_RS17145-1;Parent=rna-CCO47_RS17145;anticodon=(pos:complement(3460868..3460870));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS17145;product=tRNA-Arg NZ_CP075113.1 RefSeq gene 3461159 3461755 . + . ID=gene-CCO47_RS17150;Name=fimW;gbkey=Gene;gene=fimW;gene_biotype=protein_coding;locus_tag=CCO47_RS17150;old_locus_tag=CCO47_17150 NZ_CP075113.1 Protein Homology CDS 3461159 3461755 . + 0 ID=cds-WP_000944154.1;Parent=gene-CCO47_RS17150;Dbxref=GenBank:WP_000944154.1;Name=WP_000944154.1;gbkey=CDS;gene=fimW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459547.1;locus_tag=CCO47_RS17150;product=fimbria biosynthesis transcriptional regulator FimW;protein_id=WP_000944154.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3461917 3462227 . + . ID=gene-CCO47_RS17155;Name=CCO47_RS17155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS17155;old_locus_tag=CCO47_17155;pseudo=true NZ_CP075113.1 Protein Homology CDS 3461917 3462227 . + 0 ID=cds-CCO47_RS17155;Parent=gene-CCO47_RS17155;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459546.1;locus_tag=CCO47_RS17155;product=diguanylate cyclase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3462246 3462968 . + . ID=gene-CCO47_RS17160;Name=fimY;gbkey=Gene;gene=fimY;gene_biotype=protein_coding;locus_tag=CCO47_RS17160;old_locus_tag=CCO47_17160 NZ_CP075113.1 Protein Homology CDS 3462246 3462968 . + 0 ID=cds-WP_001258110.1;Parent=gene-CCO47_RS17160;Dbxref=GenBank:WP_001258110.1;Name=WP_001258110.1;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459545.1;locus_tag=CCO47_RS17160;product=fimbria biosynthesis regulator FimY;protein_id=WP_001258110.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3463572 3464204 . + . ID=gene-CCO47_RS17165;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=CCO47_RS17165;old_locus_tag=CCO47_17165 NZ_CP075113.1 Protein Homology CDS 3463572 3464204 . + 0 ID=cds-WP_000801273.1;Parent=gene-CCO47_RS17165;Dbxref=GenBank:WP_000801273.1;Name=WP_000801273.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459544.1;locus_tag=CCO47_RS17165;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_000801273.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3464250 3464768 . - . ID=gene-CCO47_RS17170;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=CCO47_RS17170;old_locus_tag=CCO47_17170 NZ_CP075113.1 Protein Homology CDS 3464250 3464768 . - 0 ID=cds-WP_000577507.1;Parent=gene-CCO47_RS17170;Dbxref=GenBank:WP_000577507.1;Name=WP_000577507.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459543.1;locus_tag=CCO47_RS17170;product=fimbria assembly protein;protein_id=WP_000577507.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3464778 3465785 . - . ID=gene-CCO47_RS17175;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=CCO47_RS17175;old_locus_tag=CCO47_17175 NZ_CP075113.1 Protein Homology CDS 3464778 3465785 . - 0 ID=cds-WP_000708660.1;Parent=gene-CCO47_RS17175;Dbxref=GenBank:WP_000708660.1;Name=WP_000708660.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459542.1;locus_tag=CCO47_RS17175;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_000708660.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3465800 3468412 . - . ID=gene-CCO47_RS17180;Name=CCO47_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17180;old_locus_tag=CCO47_17180 NZ_CP075113.1 Protein Homology CDS 3465800 3468412 . - 0 ID=cds-WP_000754223.1;Parent=gene-CCO47_RS17180;Dbxref=GenBank:WP_000754223.1;Name=WP_000754223.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=CCO47_RS17180;product=fimbrial biogenesis usher protein;protein_id=WP_000754223.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3468443 3469135 . - . ID=gene-CCO47_RS17185;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=CCO47_RS17185;old_locus_tag=CCO47_17185 NZ_CP075113.1 Protein Homology CDS 3468443 3469135 . - 0 ID=cds-WP_001675699.1;Parent=gene-CCO47_RS17185;Dbxref=GenBank:WP_001675699.1;Name=WP_001675699.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459540.1;locus_tag=CCO47_RS17185;product=type 1 fimbria chaperone FimC;protein_id=WP_001675699.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3469179 3469712 . - . ID=gene-CCO47_RS17190;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=pseudogene;locus_tag=CCO47_RS17190;old_locus_tag=CCO47_17190;pseudo=true NZ_CP075113.1 Protein Homology CDS 3469179 3469712 . - 0 ID=cds-CCO47_RS17190;Parent=gene-CCO47_RS17190;Note=internal stop;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=CCO47_RS17190;product=type 1 fimbrial protein subunit FimI;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3469786 3470343 . - . ID=gene-CCO47_RS17195;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=CCO47_RS17195;old_locus_tag=CCO47_17195 NZ_CP075113.1 Protein Homology CDS 3469786 3470343 . - 0 ID=cds-WP_000681023.1;Parent=gene-CCO47_RS17195;Dbxref=GenBank:WP_000681023.1;Name=WP_000681023.1;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459538.3;locus_tag=CCO47_RS17195;product=type 1 fimbrial protein subunit FimA;protein_id=WP_000681023.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3470890 3471756 . + . ID=gene-CCO47_RS17200;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=CCO47_RS17200;old_locus_tag=CCO47_17200 NZ_CP075113.1 Protein Homology CDS 3470890 3471756 . + 0 ID=cds-WP_000729165.1;Parent=gene-CCO47_RS17200;Dbxref=GenBank:WP_000729165.1;Name=WP_000729165.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459537.1;locus_tag=CCO47_RS17200;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729165.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3471758 3471970 . + . ID=gene-CCO47_RS17205;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=CCO47_RS17205;old_locus_tag=CCO47_17205 NZ_CP075113.1 Protein Homology CDS 3471758 3471970 . + 0 ID=cds-WP_000190281.1;Parent=gene-CCO47_RS17205;Dbxref=GenBank:WP_000190281.1;Name=WP_000190281.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459536.1;locus_tag=CCO47_RS17205;product=ribosome-associated protein YbcJ;protein_id=WP_000190281.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3472097 3472642 . + . ID=gene-CCO47_RS17210;Name=CCO47_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17210;old_locus_tag=CCO47_17210 NZ_CP075113.1 Protein Homology CDS 3472097 3472642 . + 0 ID=cds-WP_001143571.1;Parent=gene-CCO47_RS17210;Dbxref=GenBank:WP_001143571.1;Name=WP_001143571.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459535.1;locus_tag=CCO47_RS17210;product=metal-dependent hydrolase;protein_id=WP_001143571.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3472635 3473072 . + . ID=gene-CCO47_RS17215;Name=CCO47_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17215;old_locus_tag=CCO47_17215 NZ_CP075113.1 Protein Homology CDS 3472635 3473072 . + 0 ID=cds-WP_001038574.1;Parent=gene-CCO47_RS17215;Dbxref=GenBank:WP_001038574.1;Name=WP_001038574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459534.1;locus_tag=CCO47_RS17215;product=STM0539 family protein;protein_id=WP_001038574.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3473069 3473893 . + . ID=gene-CCO47_RS17220;Name=CCO47_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17220;old_locus_tag=CCO47_17220 NZ_CP075113.1 Protein Homology CDS 3473069 3473893 . + 0 ID=cds-WP_000819121.1;Parent=gene-CCO47_RS17220;Dbxref=GenBank:WP_000819121.1;Name=WP_000819121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459533.1;locus_tag=CCO47_RS17220;product=DUF2145 domain-containing protein;protein_id=WP_000819121.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3473938 3475323 . - . ID=gene-CCO47_RS17225;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=CCO47_RS17225;old_locus_tag=CCO47_17225 NZ_CP075113.1 Protein Homology CDS 3473938 3475323 . - 0 ID=cds-WP_000912377.1;Parent=gene-CCO47_RS17225;Dbxref=GenBank:WP_000912377.1;Name=WP_000912377.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=CCO47_RS17225;product=cysteine--tRNA ligase;protein_id=WP_000912377.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3475496 3475990 . + . ID=gene-CCO47_RS17230;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=CCO47_RS17230;old_locus_tag=CCO47_17230 NZ_CP075113.1 Protein Homology CDS 3475496 3475990 . + 0 ID=cds-WP_000255991.1;Parent=gene-CCO47_RS17230;Dbxref=GenBank:WP_000255991.1;Name=WP_000255991.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=CCO47_RS17230;product=peptidylprolyl isomerase B;protein_id=WP_000255991.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3475993 3476715 . + . ID=gene-CCO47_RS17235;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=CCO47_RS17235;old_locus_tag=CCO47_17235 NZ_CP075113.1 Protein Homology CDS 3475993 3476715 . + 0 ID=cds-WP_000212278.1;Parent=gene-CCO47_RS17235;Dbxref=GenBank:WP_000212278.1;Name=WP_000212278.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459530.1;locus_tag=CCO47_RS17235;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_000212278.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3476833 3477342 . + . ID=gene-CCO47_RS17240;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=CCO47_RS17240;old_locus_tag=CCO47_17240 NZ_CP075113.1 Protein Homology CDS 3476833 3477342 . + 0 ID=cds-WP_000098736.1;Parent=gene-CCO47_RS17240;Dbxref=GenBank:WP_000098736.1;Name=WP_000098736.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459529.1;locus_tag=CCO47_RS17240;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_000098736.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3477339 3478406 . + . ID=gene-CCO47_RS17245;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=CCO47_RS17245;old_locus_tag=CCO47_17245 NZ_CP075113.1 Protein Homology CDS 3477339 3478406 . + 0 ID=cds-WP_000815603.1;Parent=gene-CCO47_RS17245;Dbxref=GenBank:WP_000815603.1;Name=WP_000815603.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459528.1;locus_tag=CCO47_RS17245;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_000815603.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3478447 3479340 . - . ID=gene-CCO47_RS17250;Name=CCO47_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17250;old_locus_tag=CCO47_17250 NZ_CP075113.1 Protein Homology CDS 3478447 3479340 . - 0 ID=cds-WP_000855334.1;Parent=gene-CCO47_RS17250;Dbxref=GenBank:WP_000855334.1;Name=WP_000855334.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459527.1;locus_tag=CCO47_RS17250;product=carbamate kinase;protein_id=WP_000855334.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3479344 3480153 . - . ID=gene-CCO47_RS17255;Name=CCO47_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17255;old_locus_tag=CCO47_17255 NZ_CP075113.1 Protein Homology CDS 3479344 3480153 . - 0 ID=cds-WP_000821191.1;Parent=gene-CCO47_RS17255;Dbxref=GenBank:WP_000821191.1;Name=WP_000821191.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459526.1;locus_tag=CCO47_RS17255;product=oxamate carbamoyltransferase subunit AllH family protein;protein_id=WP_000821191.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3480165 3481424 . - . ID=gene-CCO47_RS17260;Name=CCO47_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17260;old_locus_tag=CCO47_17260 NZ_CP075113.1 Protein Homology CDS 3480165 3481424 . - 0 ID=cds-WP_000495336.1;Parent=gene-CCO47_RS17260;Dbxref=GenBank:WP_000495336.1;Name=WP_000495336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459525.1;locus_tag=CCO47_RS17260;product=YlbE family protein;protein_id=WP_000495336.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3481434 3483098 . - . ID=gene-CCO47_RS17265;Name=CCO47_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17265;old_locus_tag=CCO47_17265 NZ_CP075113.1 Protein Homology CDS 3481434 3483098 . - 0 ID=cds-WP_000580903.1;Parent=gene-CCO47_RS17265;Dbxref=GenBank:WP_000580903.1;Name=WP_000580903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459524.1;locus_tag=CCO47_RS17265;product=acyl-CoA synthetase FdrA;protein_id=WP_000580903.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3483414 3484463 . + . ID=gene-CCO47_RS17270;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=CCO47_RS17270;old_locus_tag=CCO47_17270 NZ_CP075113.1 Protein Homology CDS 3483414 3484463 . + 0 ID=cds-WP_000703934.1;Parent=gene-CCO47_RS17270;Dbxref=GenBank:WP_000703934.1;Name=WP_000703934.1;gbkey=CDS;gene=allD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459523.1;locus_tag=CCO47_RS17270;product=ureidoglycolate dehydrogenase AllD;protein_id=WP_000703934.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3484485 3485720 . + . ID=gene-CCO47_RS17275;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=CCO47_RS17275;old_locus_tag=CCO47_17275 NZ_CP075113.1 Protein Homology CDS 3484485 3485720 . + 0 ID=cds-WP_000589769.1;Parent=gene-CCO47_RS17275;Dbxref=GenBank:WP_000589769.1;Name=WP_000589769.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459522.1;locus_tag=CCO47_RS17275;product=allantoate deiminase;protein_id=WP_000589769.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3485731 3486516 . + . ID=gene-CCO47_RS17280;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=CCO47_RS17280;old_locus_tag=CCO47_17280 NZ_CP075113.1 Protein Homology CDS 3485731 3486516 . + 0 ID=cds-WP_000540985.1;Parent=gene-CCO47_RS17280;Dbxref=GenBank:WP_000540985.1;Name=WP_000540985.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459521.1;locus_tag=CCO47_RS17280;product=(S)-ureidoglycine aminohydrolase;protein_id=WP_000540985.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3486596 3487744 . - . ID=gene-CCO47_RS17285;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=CCO47_RS17285;old_locus_tag=CCO47_17285 NZ_CP075113.1 Protein Homology CDS 3486596 3487744 . - 0 ID=cds-WP_000706327.1;Parent=gene-CCO47_RS17285;Dbxref=GenBank:WP_000706327.1;Name=WP_000706327.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459520.1;locus_tag=CCO47_RS17285;product=glycerate 3-kinase;protein_id=WP_000706327.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3487767 3489065 . - . ID=gene-CCO47_RS17290;Name=CCO47_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17290;old_locus_tag=CCO47_17290 NZ_CP075113.1 Protein Homology CDS 3487767 3489065 . - 0 ID=cds-WP_000484505.1;Parent=gene-CCO47_RS17290;Dbxref=GenBank:WP_000484505.1;Name=WP_000484505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459519.1;locus_tag=CCO47_RS17290;product=uracil/xanthine transporter;protein_id=WP_000484505.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3489124 3490485 . - . ID=gene-CCO47_RS17295;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=CCO47_RS17295;old_locus_tag=CCO47_17295 NZ_CP075113.1 Protein Homology CDS 3489124 3490485 . - 0 ID=cds-WP_000006865.1;Parent=gene-CCO47_RS17295;Dbxref=GenBank:WP_000006865.1;Name=WP_000006865.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459518.1;locus_tag=CCO47_RS17295;product=allantoinase AllB;protein_id=WP_000006865.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3490564 3492018 . - . ID=gene-CCO47_RS17300;Name=CCO47_RS17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17300;old_locus_tag=CCO47_17300 NZ_CP075113.1 Protein Homology CDS 3490564 3492018 . - 0 ID=cds-WP_000401061.1;Parent=gene-CCO47_RS17300;Dbxref=GenBank:WP_000401061.1;Name=WP_000401061.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=CCO47_RS17300;product=allantoin transporter;protein_id=WP_000401061.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3492114 3493360 . - . ID=gene-CCO47_RS17305;Name=CCO47_RS17305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS17305;old_locus_tag=CCO47_17305;pseudo=true NZ_CP075113.1 Protein Homology CDS 3492114 3493360 . - 0 ID=cds-CCO47_RS17305;Parent=gene-CCO47_RS17305;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459515.1;locus_tag=CCO47_RS17305;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3493426 3494304 . - . ID=gene-CCO47_RS17310;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=CCO47_RS17310;old_locus_tag=CCO47_17310 NZ_CP075113.1 Protein Homology CDS 3493426 3494304 . - 0 ID=cds-WP_000765815.1;Parent=gene-CCO47_RS17310;Dbxref=GenBank:WP_000765815.1;Name=WP_000765815.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459514.1;locus_tag=CCO47_RS17310;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000765815.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3494405 3495181 . - . ID=gene-CCO47_RS17315;Name=gip;gbkey=Gene;gene=gip;gene_biotype=protein_coding;locus_tag=CCO47_RS17315;old_locus_tag=CCO47_17315 NZ_CP075113.1 Protein Homology CDS 3494405 3495181 . - 0 ID=cds-WP_000943591.1;Parent=gene-CCO47_RS17315;Dbxref=GenBank:WP_000943591.1;Name=WP_000943591.1;gbkey=CDS;gene=gip;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459513.1;locus_tag=CCO47_RS17315;product=hydroxypyruvate isomerase Gip;protein_id=WP_000943591.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3495194 3496975 . - . ID=gene-CCO47_RS17320;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=CCO47_RS17320;old_locus_tag=CCO47_17320 NZ_CP075113.1 Protein Homology CDS 3495194 3496975 . - 0 ID=cds-WP_001096859.1;Parent=gene-CCO47_RS17320;Dbxref=GenBank:WP_001096859.1;Name=WP_001096859.1;Ontology_term=GO:0009436,GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459512.1;locus_tag=CCO47_RS17320;product=glyoxylate carboligase;protein_id=WP_001096859.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3497060 3497878 . - . ID=gene-CCO47_RS17325;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=CCO47_RS17325;old_locus_tag=CCO47_17325 NZ_CP075113.1 Protein Homology CDS 3497060 3497878 . - 0 ID=cds-WP_000141265.1;Parent=gene-CCO47_RS17325;Dbxref=GenBank:WP_000141265.1;Name=WP_000141265.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459511.1;locus_tag=CCO47_RS17325;product=HTH-type transcriptional repressor AllR;protein_id=WP_000141265.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3497957 3498439 . - . ID=gene-CCO47_RS17330;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=CCO47_RS17330;old_locus_tag=CCO47_17330 NZ_CP075113.1 Protein Homology CDS 3497957 3498439 . - 0 ID=cds-WP_000764659.1;Parent=gene-CCO47_RS17330;Dbxref=GenBank:WP_000764659.1;Name=WP_000764659.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459510.1;locus_tag=CCO47_RS17330;product=ureidoglycolate lyase;protein_id=WP_000764659.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3498666 3499592 . + . ID=gene-CCO47_RS17335;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=CCO47_RS17335;old_locus_tag=CCO47_17335 NZ_CP075113.1 Protein Homology CDS 3498666 3499592 . + 0 ID=cds-WP_000460169.1;Parent=gene-CCO47_RS17335;Dbxref=GenBank:WP_000460169.1;Name=WP_000460169.1;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459509.1;locus_tag=CCO47_RS17335;product=HTH-type transcriptional activator AllS;protein_id=WP_000460169.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3499662 3500756 . + . ID=gene-CCO47_RS17340;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=CCO47_RS17340;old_locus_tag=CCO47_17340 NZ_CP075113.1 Protein Homology CDS 3499662 3500756 . + 0 ID=cds-WP_001154062.1;Parent=gene-CCO47_RS17340;Dbxref=GenBank:WP_001154062.1;Name=WP_001154062.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459508.1;locus_tag=CCO47_RS17340;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_001154062.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3500795 3501454 . - . ID=gene-CCO47_RS17345;Name=CCO47_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17345;old_locus_tag=CCO47_17345 NZ_CP075113.1 Protein Homology CDS 3500795 3501454 . - 0 ID=cds-WP_000342247.1;Parent=gene-CCO47_RS17345;Dbxref=GenBank:WP_000342247.1;Name=WP_000342247.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459507.1;locus_tag=CCO47_RS17345;product=methionine ABC transporter permease;protein_id=WP_000342247.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3501447 3502463 . - . ID=gene-CCO47_RS17350;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=CCO47_RS17350;old_locus_tag=CCO47_17350 NZ_CP075113.1 Protein Homology CDS 3501447 3502463 . - 0 ID=cds-WP_000569660.1;Parent=gene-CCO47_RS17350;Dbxref=GenBank:WP_000569660.1;Name=WP_000569660.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459506.1;locus_tag=CCO47_RS17350;product=virulence-associated ABC transporter ATP-binding protein SfbB;protein_id=WP_000569660.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3502500 3503330 . - . ID=gene-CCO47_RS17355;Name=CCO47_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17355;old_locus_tag=CCO47_17355 NZ_CP075113.1 Protein Homology CDS 3502500 3503330 . - 0 ID=cds-WP_000524320.1;Parent=gene-CCO47_RS17355;Dbxref=GenBank:WP_000524320.1;Name=WP_000524320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459505.1;locus_tag=CCO47_RS17355;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_000524320.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3503587 3504720 . - . ID=gene-CCO47_RS17360;Name=CCO47_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17360;old_locus_tag=CCO47_17360 NZ_CP075113.1 Protein Homology CDS 3503587 3504720 . - 0 ID=cds-WP_000152864.1;Parent=gene-CCO47_RS17360;Dbxref=GenBank:WP_000152864.1;Name=WP_000152864.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=CCO47_RS17360;product=porin;protein_id=WP_000152864.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3504906 3507320 . - . ID=gene-CCO47_RS17365;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=CCO47_RS17365;old_locus_tag=CCO47_17365 NZ_CP075113.1 Protein Homology CDS 3504906 3507320 . - 0 ID=cds-WP_000561770.1;Parent=gene-CCO47_RS17365;Dbxref=GenBank:WP_000561770.1;Name=WP_000561770.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=CCO47_RS17365;product=putative ABC transporter permease subunit YbbP;protein_id=WP_000561770.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3507317 3508003 . - . ID=gene-CCO47_RS17370;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=CCO47_RS17370;old_locus_tag=CCO47_17370 NZ_CP075113.1 Protein Homology CDS 3507317 3508003 . - 0 ID=cds-WP_001110591.1;Parent=gene-CCO47_RS17370;Dbxref=GenBank:WP_001110591.1;Name=WP_001110591.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904898.1;locus_tag=CCO47_RS17370;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_001110591.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3507974 3508588 . + . ID=gene-CCO47_RS17375;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=CCO47_RS17375;old_locus_tag=CCO47_17375 NZ_CP075113.1 Protein Homology CDS 3507974 3508588 . + 0 ID=cds-WP_001010574.1;Parent=gene-CCO47_RS17375;Dbxref=GenBank:WP_001010574.1;Name=WP_001010574.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459501.1;locus_tag=CCO47_RS17375;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_001010574.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3508743 3509513 . + . ID=gene-CCO47_RS17380;Name=CCO47_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17380;old_locus_tag=CCO47_17380 NZ_CP075113.1 Protein Homology CDS 3508743 3509513 . + 0 ID=cds-WP_001172804.1;Parent=gene-CCO47_RS17380;Dbxref=GenBank:WP_001172804.1;Name=WP_001172804.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459500.1;locus_tag=CCO47_RS17380;product=SDR family oxidoreductase;protein_id=WP_001172804.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3509573 3510427 . + . ID=gene-CCO47_RS17385;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=CCO47_RS17385;old_locus_tag=CCO47_17385 NZ_CP075113.1 Protein Homology CDS 3509573 3510427 . + 0 ID=cds-WP_000116060.1;Parent=gene-CCO47_RS17385;Dbxref=GenBank:WP_000116060.1;Name=WP_000116060.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459499.1;locus_tag=CCO47_RS17385;product=chaperedoxin;protein_id=WP_000116060.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3510513 3511292 . - . ID=gene-CCO47_RS17390;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=CCO47_RS17390;old_locus_tag=CCO47_17390 NZ_CP075113.1 Protein Homology CDS 3510513 3511292 . - 0 ID=cds-WP_001002132.1;Parent=gene-CCO47_RS17390;Dbxref=GenBank:WP_001002132.1;Name=WP_001002132.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459498.1;locus_tag=CCO47_RS17390;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_001002132.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3511279 3511956 . - . ID=gene-CCO47_RS17395;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=CCO47_RS17395;old_locus_tag=CCO47_17395 NZ_CP075113.1 Protein Homology CDS 3511279 3511956 . - 0 ID=cds-WP_000140194.1;Parent=gene-CCO47_RS17395;Dbxref=GenBank:WP_000140194.1;Name=WP_000140194.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=CCO47_RS17395;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_000140194.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3512103 3513020 . + . ID=gene-CCO47_RS17400;Name=CCO47_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17400;old_locus_tag=CCO47_17400 NZ_CP075113.1 Protein Homology CDS 3512103 3513020 . + 0 ID=cds-WP_000906146.1;Parent=gene-CCO47_RS17400;Dbxref=GenBank:WP_000906146.1;Name=WP_000906146.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=CCO47_RS17400;product=SPFH domain-containing protein;protein_id=WP_000906146.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3513017 3513469 . + . ID=gene-CCO47_RS17405;Name=CCO47_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17405;old_locus_tag=CCO47_17405 NZ_CP075113.1 Protein Homology CDS 3513017 3513469 . + 0 ID=cds-WP_000561181.1;Parent=gene-CCO47_RS17405;Dbxref=GenBank:WP_000561181.1;Name=WP_000561181.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459495.1;locus_tag=CCO47_RS17405;product=NfeD family protein;protein_id=WP_000561181.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3513470 3513886 . - . ID=gene-CCO47_RS17410;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=CCO47_RS17410;old_locus_tag=CCO47_17410 NZ_CP075113.1 Protein Homology CDS 3513470 3513886 . - 0 ID=cds-WP_001026757.1;Parent=gene-CCO47_RS17410;Dbxref=GenBank:WP_001026757.1;Name=WP_001026757.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459494.1;locus_tag=CCO47_RS17410;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026757.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3513996 3516497 . + . ID=gene-CCO47_RS17415;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=CCO47_RS17415;old_locus_tag=CCO47_17415 NZ_CP075113.1 Protein Homology CDS 3513996 3516497 . + 0 ID=cds-WP_094912355.1;Parent=gene-CCO47_RS17415;Dbxref=GenBank:WP_094912355.1;Name=WP_094912355.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=CCO47_RS17415;product=copper-exporting P-type ATPase CopA;protein_id=WP_094912355.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3516651 3517478 . + . ID=gene-CCO47_RS17420;Name=CCO47_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17420;old_locus_tag=CCO47_17420 NZ_CP075113.1 Protein Homology CDS 3516651 3517478 . + 0 ID=cds-WP_000488559.1;Parent=gene-CCO47_RS17420;Dbxref=GenBank:WP_000488559.1;Name=WP_000488559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459492.1;locus_tag=CCO47_RS17420;product=lysozyme inhibitor LprI family protein;protein_id=WP_000488559.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3517564 3518358 . + . ID=gene-CCO47_RS17425;Name=CCO47_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17425;old_locus_tag=CCO47_17425 NZ_CP075113.1 Protein Homology CDS 3517564 3518358 . + 0 ID=cds-WP_000421861.1;Parent=gene-CCO47_RS17425;Dbxref=GenBank:WP_000421861.1;Name=WP_000421861.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459491.1;locus_tag=CCO47_RS17425;product=TraB/GumN family protein;protein_id=WP_000421861.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3518560 3519039 . + . ID=gene-CCO47_RS17430;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=CCO47_RS17430;old_locus_tag=CCO47_17430 NZ_CP075113.1 Protein Homology CDS 3518560 3519039 . + 0 ID=cds-WP_000186618.1;Parent=gene-CCO47_RS17430;Dbxref=GenBank:WP_000186618.1;Name=WP_000186618.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=CCO47_RS17430;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186618.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3519156 3520808 . - . ID=gene-CCO47_RS17435;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=CCO47_RS17435;old_locus_tag=CCO47_17435 NZ_CP075113.1 Protein Homology CDS 3519156 3520808 . - 0 ID=cds-WP_000670408.1;Parent=gene-CCO47_RS17435;Dbxref=GenBank:WP_000670408.1;Name=WP_000670408.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=CCO47_RS17435;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_000670408.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3520981 3522201 . + . ID=gene-CCO47_RS17440;Name=CCO47_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17440;old_locus_tag=CCO47_17440 NZ_CP075113.1 Protein Homology CDS 3520981 3522201 . + 0 ID=cds-WP_001251592.1;Parent=gene-CCO47_RS17440;Dbxref=GenBank:WP_001251592.1;Name=WP_001251592.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=CCO47_RS17440;product=MFS transporter;protein_id=WP_001251592.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3522416 3524092 . + . ID=gene-CCO47_RS17445;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=CCO47_RS17445;old_locus_tag=CCO47_17445 NZ_CP075113.1 Protein Homology CDS 3522416 3524092 . + 0 ID=cds-WP_000546209.1;Parent=gene-CCO47_RS17445;Dbxref=GenBank:WP_000546209.1;Name=WP_000546209.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459487.1;locus_tag=CCO47_RS17445;product=YbaL family putative K(+) efflux transporter;protein_id=WP_000546209.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3524141 3525445 . - . ID=gene-CCO47_RS17450;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=CCO47_RS17450;old_locus_tag=CCO47_17450 NZ_CP075113.1 Protein Homology CDS 3524141 3525445 . - 0 ID=cds-WP_001573960.1;Parent=gene-CCO47_RS17450;Dbxref=GenBank:WP_001573960.1;Name=WP_001573960.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=CCO47_RS17450;product=inosine/guanosine kinase;protein_id=WP_001573960.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3525598 3526569 . + . ID=gene-CCO47_RS17455;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=CCO47_RS17455;old_locus_tag=CCO47_17455 NZ_CP075113.1 Protein Homology CDS 3525598 3526569 . + 0 ID=cds-WP_000801777.1;Parent=gene-CCO47_RS17455;Dbxref=GenBank:WP_000801777.1;Name=WP_000801777.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459485.1;locus_tag=CCO47_RS17455;product=acetyl esterase;protein_id=WP_000801777.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3526566 3527528 . - . ID=gene-CCO47_RS17460;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=CCO47_RS17460;old_locus_tag=CCO47_17460 NZ_CP075113.1 Protein Homology CDS 3526566 3527528 . - 0 ID=cds-WP_001250083.1;Parent=gene-CCO47_RS17460;Dbxref=GenBank:WP_001250083.1;Name=WP_001250083.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459484.1;locus_tag=CCO47_RS17460;product=ferrochelatase;protein_id=WP_001250083.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3527757 3528401 . - . ID=gene-CCO47_RS17465;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=CCO47_RS17465;old_locus_tag=CCO47_17465 NZ_CP075113.1 Protein Homology CDS 3527757 3528401 . - 0 ID=cds-WP_001220237.1;Parent=gene-CCO47_RS17465;Dbxref=GenBank:WP_001220237.1;Name=WP_001220237.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=AMP kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=CCO47_RS17465;product=adenylate kinase;protein_id=WP_001220237.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3528759 3530633 . - . ID=gene-CCO47_RS17470;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=CCO47_RS17470;old_locus_tag=CCO47_17470 NZ_CP075113.1 Protein Homology CDS 3528759 3530633 . - 0 ID=cds-WP_001573956.1;Parent=gene-CCO47_RS17470;Dbxref=GenBank:WP_001573956.1;Name=WP_001573956.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=CCO47_RS17470;product=molecular chaperone HtpG;protein_id=WP_001573956.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3530744 3531349 . - . ID=gene-CCO47_RS17475;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=CCO47_RS17475;old_locus_tag=CCO47_17475 NZ_CP075113.1 Protein Homology CDS 3530744 3531349 . - 0 ID=cds-WP_001195023.1;Parent=gene-CCO47_RS17475;Dbxref=GenBank:WP_001195023.1;Name=WP_001195023.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459481.1;locus_tag=CCO47_RS17475;product=recombination mediator RecR;protein_id=WP_001195023.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3531349 3531678 . - . ID=gene-CCO47_RS17480;Name=CCO47_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17480;old_locus_tag=CCO47_17480 NZ_CP075113.1 Protein Homology CDS 3531349 3531678 . - 0 ID=cds-WP_000467098.1;Parent=gene-CCO47_RS17480;Dbxref=GenBank:WP_000467098.1;Name=WP_000467098.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=CCO47_RS17480;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3531724 3533652 . - . ID=gene-CCO47_RS17485;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=CCO47_RS17485;old_locus_tag=CCO47_17485 NZ_CP075113.1 Protein Homology CDS 3531724 3533652 . - 0 ID=cds-WP_000121974.1;Parent=gene-CCO47_RS17485;Dbxref=GenBank:WP_000121974.1;Name=WP_000121974.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=CCO47_RS17485;product=DNA polymerase III subunit gamma/tau;protein_id=WP_000121974.1;transl_table=11 NZ_CP075113.1 cmsearch sequence_feature 3532327 3532391 . - . ID=id-CCO47_RS17485;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS17485 NZ_CP075113.1 RefSeq gene 3533766 3534317 . - . ID=gene-CCO47_RS17490;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=CCO47_RS17490;old_locus_tag=CCO47_17490 NZ_CP075113.1 Protein Homology CDS 3533766 3534317 . - 0 ID=cds-WP_000127350.1;Parent=gene-CCO47_RS17490;Dbxref=GenBank:WP_000127350.1;Name=WP_000127350.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=CCO47_RS17490;product=adenine phosphoribosyltransferase;protein_id=WP_000127350.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3534470 3534847 . - . ID=gene-CCO47_RS17495;Name=CCO47_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17495;old_locus_tag=CCO47_17495 NZ_CP075113.1 Protein Homology CDS 3534470 3534847 . - 0 ID=cds-WP_001189860.1;Parent=gene-CCO47_RS17495;Dbxref=GenBank:WP_001189860.1;Name=WP_001189860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459477.1;locus_tag=CCO47_RS17495;product=DUF454 family protein;protein_id=WP_001189860.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3534916 3535443 . + . ID=gene-CCO47_RS17500;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=CCO47_RS17500;old_locus_tag=CCO47_17500 NZ_CP075113.1 Protein Homology CDS 3534916 3535443 . + 0 ID=cds-WP_001575715.1;Parent=gene-CCO47_RS17500;Dbxref=GenBank:WP_001575715.1;Name=WP_001575715.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001454692.1;locus_tag=CCO47_RS17500;product=primosomal replication protein N'';protein_id=WP_001575715.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3535457 3535624 . + . ID=gene-CCO47_RS17505;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=CCO47_RS17505;old_locus_tag=CCO47_17505 NZ_CP075113.1 Protein Homology CDS 3535457 3535624 . + 0 ID=cds-WP_000051161.1;Parent=gene-CCO47_RS17505;Dbxref=GenBank:WP_000051161.1;Name=WP_000051161.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459475.1;locus_tag=CCO47_RS17505;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051161.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3535694 3536629 . + . ID=gene-CCO47_RS17510;Name=CCO47_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17510;old_locus_tag=CCO47_17510 NZ_CP075113.1 Protein Homology CDS 3535694 3536629 . + 0 ID=cds-WP_000440504.1;Parent=gene-CCO47_RS17510;Dbxref=GenBank:WP_000440504.1;Name=WP_000440504.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004536,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA nuclease activity|0004536||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=CCO47_RS17510;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000440504.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3536671 3540033 . - . ID=gene-CCO47_RS17515;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=CCO47_RS17515;old_locus_tag=CCO47_17515 NZ_CP075113.1 Protein Homology CDS 3536671 3540033 . - 0 ID=cds-WP_000178241.1;Parent=gene-CCO47_RS17515;Dbxref=GenBank:WP_000178241.1;Name=WP_000178241.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459473.1;locus_tag=CCO47_RS17515;product=mechanosensitive channel MscK;protein_id=WP_000178241.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3540152 3540805 . - . ID=gene-CCO47_RS17520;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=CCO47_RS17520;old_locus_tag=CCO47_17520 NZ_CP075113.1 Protein Homology CDS 3540152 3540805 . - 0 ID=cds-WP_000101753.1;Parent=gene-CCO47_RS17520;Dbxref=GenBank:WP_000101753.1;Name=WP_000101753.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459472.1;locus_tag=CCO47_RS17520;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101753.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3540947 3542140 . + . ID=gene-CCO47_RS17525;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=CCO47_RS17525;old_locus_tag=CCO47_17525 NZ_CP075113.1 Protein Homology CDS 3540947 3542140 . + 0 ID=cds-WP_001039202.1;Parent=gene-CCO47_RS17525;Dbxref=GenBank:WP_001039202.1;Name=WP_001039202.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459471.1;locus_tag=CCO47_RS17525;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_001039202.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3542163 3545312 . + . ID=gene-CCO47_RS17530;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=CCO47_RS17530;old_locus_tag=CCO47_17530 NZ_CP075113.1 Protein Homology CDS 3542163 3545312 . + 0 ID=cds-WP_001132508.1;Parent=gene-CCO47_RS17530;Dbxref=GenBank:WP_001132508.1;Name=WP_001132508.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=CCO47_RS17530;product=efflux RND transporter permease AcrB;protein_id=WP_001132508.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3545808 3546182 . + . ID=gene-CCO47_RS17535;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=CCO47_RS17535;old_locus_tag=CCO47_17535 NZ_CP075113.1 Protein Homology CDS 3545808 3546182 . + 0 ID=cds-WP_000344807.1;Parent=gene-CCO47_RS17535;Dbxref=GenBank:WP_000344807.1;Name=WP_000344807.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=CCO47_RS17535;product=Hha toxicity modulator TomB;protein_id=WP_000344807.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3546210 3546428 . + . ID=gene-CCO47_RS17540;Name=CCO47_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17540;old_locus_tag=CCO47_17540 NZ_CP075113.1 Protein Homology CDS 3546210 3546428 . + 0 ID=cds-WP_001280991.1;Parent=gene-CCO47_RS17540;Dbxref=GenBank:WP_001280991.1;Name=WP_001280991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=CCO47_RS17540;product=hemolysin expression-modulating protein Hha;protein_id=WP_001280991.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3546607 3547158 . + . ID=gene-CCO47_RS17545;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=CCO47_RS17545;old_locus_tag=CCO47_17545 NZ_CP075113.1 Protein Homology CDS 3546607 3547158 . + 0 ID=cds-WP_001278787.1;Parent=gene-CCO47_RS17545;Dbxref=GenBank:WP_001278787.1;Name=WP_001278787.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459467.1;locus_tag=CCO47_RS17545;product=maltose O-acetyltransferase;protein_id=WP_001278787.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3547276 3547746 . + . ID=gene-CCO47_RS17550;Name=CCO47_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17550;old_locus_tag=CCO47_17550 NZ_CP075113.1 Protein Homology CDS 3547276 3547746 . + 0 ID=cds-WP_000136183.1;Parent=gene-CCO47_RS17550;Dbxref=GenBank:WP_000136183.1;Name=WP_000136183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459466.1;locus_tag=CCO47_RS17550;product=YlaC family protein;protein_id=WP_000136183.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3547802 3547942 . - . ID=gene-CCO47_RS17555;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=CCO47_RS17555;old_locus_tag=CCO47_17555 NZ_CP075113.1 Protein Homology CDS 3547802 3547942 . - 0 ID=cds-WP_001197749.1;Parent=gene-CCO47_RS17555;Dbxref=GenBank:WP_001197749.1;Name=WP_001197749.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=CCO47_RS17555;product=type B 50S ribosomal protein L36;protein_id=WP_001197749.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3547948 3548208 . - . ID=gene-CCO47_RS17560;Name=CCO47_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17560;old_locus_tag=CCO47_17560 NZ_CP075113.1 Protein Homology CDS 3547948 3548208 . - 0 ID=cds-WP_000801415.1;Parent=gene-CCO47_RS17560;Dbxref=GenBank:WP_000801415.1;Name=WP_000801415.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459464.1;locus_tag=CCO47_RS17560;product=type B 50S ribosomal protein L31;protein_id=WP_000801415.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3548433 3549983 . + . ID=gene-CCO47_RS17565;Name=CCO47_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17565;old_locus_tag=CCO47_17565 NZ_CP075113.1 Protein Homology CDS 3548433 3549983 . + 0 ID=cds-WP_000213140.1;Parent=gene-CCO47_RS17565;Dbxref=GenBank:WP_000213140.1;Name=WP_000213140.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459463.1;locus_tag=CCO47_RS17565;product=EAL domain-containing protein;protein_id=WP_000213140.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3550033 3550129 . - . ID=gene-CCO47_RS17570;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=CCO47_RS17570;old_locus_tag=CCO47_17570 NZ_CP075113.1 cmsearch SRP_RNA 3550033 3550129 . - . ID=rna-CCO47_RS17570;Parent=gene-CCO47_RS17570;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS17570;product=signal recognition particle sRNA small type NZ_CP075113.1 cmsearch exon 3550033 3550129 . - . ID=exon-CCO47_RS17570-1;Parent=rna-CCO47_RS17570;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS17570;product=signal recognition particle sRNA small type NZ_CP075113.1 RefSeq gene 3550214 3550603 . + . ID=gene-CCO47_RS17575;Name=CCO47_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17575;old_locus_tag=CCO47_17575 NZ_CP075113.1 Protein Homology CDS 3550214 3550603 . + 0 ID=cds-WP_000961287.1;Parent=gene-CCO47_RS17575;Dbxref=GenBank:WP_000961287.1;Name=WP_000961287.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459462.1;locus_tag=CCO47_RS17575;product=MGMT family protein;protein_id=WP_000961287.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3550636 3551205 . - . ID=gene-CCO47_RS17580;Name=CCO47_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17580;old_locus_tag=CCO47_17580 NZ_CP075113.1 Protein Homology CDS 3550636 3551205 . - 0 ID=cds-WP_000779802.1;Parent=gene-CCO47_RS17580;Dbxref=GenBank:WP_000779802.1;Name=WP_000779802.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459461.1;locus_tag=CCO47_RS17580;product=YbaY family lipoprotein;protein_id=WP_000779802.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3551420 3552280 . + . ID=gene-CCO47_RS17585;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=CCO47_RS17585;old_locus_tag=CCO47_17585 NZ_CP075113.1 Protein Homology CDS 3551420 3552280 . + 0 ID=cds-WP_000084176.1;Parent=gene-CCO47_RS17585;Dbxref=GenBank:WP_000084176.1;Name=WP_000084176.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459460.1;locus_tag=CCO47_RS17585;product=acyl-CoA thioesterase II;protein_id=WP_000084176.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3552380 3553666 . - . ID=gene-CCO47_RS17590;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=CCO47_RS17590;old_locus_tag=CCO47_17590 NZ_CP075113.1 Protein Homology CDS 3552380 3553666 . - 0 ID=cds-WP_000684917.1;Parent=gene-CCO47_RS17590;Dbxref=GenBank:WP_000684917.1;Name=WP_000684917.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459459.1;locus_tag=CCO47_RS17590;product=ammonium transporter AmtB;protein_id=WP_000684917.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3553698 3554036 . - . ID=gene-CCO47_RS17595;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=CCO47_RS17595;old_locus_tag=CCO47_17595 NZ_CP075113.1 Protein Homology CDS 3553698 3554036 . - 0 ID=cds-WP_000780341.1;Parent=gene-CCO47_RS17595;Dbxref=GenBank:WP_000780341.1;Name=WP_000780341.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459458.1;locus_tag=CCO47_RS17595;product=P-II family nitrogen regulator;protein_id=WP_000780341.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3554092 3554217 . + . ID=gene-CCO47_RS24265;Name=CCO47_RS24265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24265 NZ_CP075113.1 GeneMarkS-2+ CDS 3554092 3554217 . + 0 ID=cds-WP_016712120.1;Parent=gene-CCO47_RS24265;Dbxref=GenBank:WP_016712120.1;Name=WP_016712120.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO47_RS24265;product=hypothetical protein;protein_id=WP_016712120.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3554249 3556030 . - . ID=gene-CCO47_RS17600;Name=CCO47_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17600;old_locus_tag=CCO47_17600 NZ_CP075113.1 Protein Homology CDS 3554249 3556030 . - 0 ID=cds-WP_001256083.1;Parent=gene-CCO47_RS17600;Dbxref=GenBank:WP_001256083.1;Name=WP_001256083.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=CCO47_RS17600;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_001256083.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3556023 3557795 . - . ID=gene-CCO47_RS17605;Name=CCO47_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17605;old_locus_tag=CCO47_17605 NZ_CP075113.1 Protein Homology CDS 3556023 3557795 . - 0 ID=cds-WP_001235567.1;Parent=gene-CCO47_RS17605;Dbxref=GenBank:WP_001235567.1;Name=WP_001235567.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459456.1;locus_tag=CCO47_RS17605;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_001235567.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3557836 3558294 . - . ID=gene-CCO47_RS17610;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=CCO47_RS17610;old_locus_tag=CCO47_17610 NZ_CP075113.1 Protein Homology CDS 3557836 3558294 . - 0 ID=cds-WP_000884593.1;Parent=gene-CCO47_RS17610;Dbxref=GenBank:WP_000884593.1;Name=WP_000884593.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459455.1;locus_tag=CCO47_RS17610;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884593.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3558407 3559462 . + . ID=gene-CCO47_RS17615;Name=cdsH;gbkey=Gene;gene=cdsH;gene_biotype=protein_coding;locus_tag=CCO47_RS17615;old_locus_tag=CCO47_17615 NZ_CP075113.1 Protein Homology CDS 3558407 3559462 . + 0 ID=cds-WP_000987849.1;Parent=gene-CCO47_RS17615;Dbxref=GenBank:WP_000987849.1;Name=WP_000987849.1;gbkey=CDS;gene=cdsH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459454.1;locus_tag=CCO47_RS17615;product=cysteine desulfhydrase;protein_id=WP_000987849.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3559512 3560330 . - . ID=gene-CCO47_RS17620;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=CCO47_RS17620;old_locus_tag=CCO47_17620 NZ_CP075113.1 Protein Homology CDS 3559512 3560330 . - 0 ID=cds-WP_000113030.1;Parent=gene-CCO47_RS17620;Dbxref=GenBank:WP_000113030.1;Name=WP_000113030.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=CCO47_RS17620;product=HMP-PP phosphatase;protein_id=WP_000113030.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3560431 3562131 . + . ID=gene-CCO47_RS17625;Name=CCO47_RS17625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS17625;old_locus_tag=CCO47_17625;pseudo=true NZ_CP075113.1 Protein Homology CDS 3560431 3562131 . + 0 ID=cds-CCO47_RS17625;Parent=gene-CCO47_RS17625;Note=internal stop;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459452.1;locus_tag=CCO47_RS17625;product=SgrR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3562196 3562891 . + . ID=gene-CCO47_RS17630;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=CCO47_RS17630;old_locus_tag=CCO47_17630 NZ_CP075113.1 Protein Homology CDS 3562196 3562891 . + 0 ID=cds-WP_000817201.1;Parent=gene-CCO47_RS17630;Dbxref=GenBank:WP_000817201.1;Name=WP_000817201.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459451.1;locus_tag=CCO47_RS17630;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_000817201.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3562997 3563395 . - . ID=gene-CCO47_RS17635;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=CCO47_RS17635;old_locus_tag=CCO47_17635 NZ_CP075113.1 Protein Homology CDS 3562997 3563395 . - 0 ID=cds-WP_001194543.1;Parent=gene-CCO47_RS17635;Dbxref=GenBank:WP_001194543.1;Name=WP_001194543.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459450.1;locus_tag=CCO47_RS17635;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194543.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3563499 3563873 . - . ID=gene-CCO47_RS17640;Name=CCO47_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17640;old_locus_tag=CCO47_17640 NZ_CP075113.1 Protein Homology CDS 3563499 3563873 . - 0 ID=cds-WP_000680322.1;Parent=gene-CCO47_RS17640;Dbxref=GenBank:WP_000680322.1;Name=WP_000680322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459449.1;locus_tag=CCO47_RS17640;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000680322.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3564023 3565894 . - . ID=gene-CCO47_RS17645;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=CCO47_RS17645;old_locus_tag=CCO47_17645 NZ_CP075113.1 Protein Homology CDS 3564023 3565894 . - 0 ID=cds-WP_000969438.1;Parent=gene-CCO47_RS17645;Dbxref=GenBank:WP_000969438.1;Name=WP_000969438.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459448.1;locus_tag=CCO47_RS17645;product=peptidylprolyl isomerase;protein_id=WP_000969438.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3566185 3566457 . - . ID=gene-CCO47_RS17650;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=CCO47_RS17650;old_locus_tag=CCO47_17650 NZ_CP075113.1 Protein Homology CDS 3566185 3566457 . - 0 ID=cds-WP_001043544.1;Parent=gene-CCO47_RS17650;Dbxref=GenBank:WP_001043544.1;Name=WP_001043544.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535194.1;locus_tag=CCO47_RS17650;product=nucleoid-associated protein HU-beta;protein_id=WP_001043544.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3566666 3569020 . - . ID=gene-CCO47_RS17655;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=CCO47_RS17655;old_locus_tag=CCO47_17655 NZ_CP075113.1 Protein Homology CDS 3566666 3569020 . - 0 ID=cds-WP_001067723.1;Parent=gene-CCO47_RS17655;Dbxref=GenBank:WP_001067723.1;Name=WP_001067723.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=CCO47_RS17655;product=endopeptidase La;protein_id=WP_001067723.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3569206 3570477 . - . ID=gene-CCO47_RS17660;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=CCO47_RS17660;old_locus_tag=CCO47_17660 NZ_CP075113.1 Protein Homology CDS 3569206 3570477 . - 0 ID=cds-WP_000130314.1;Parent=gene-CCO47_RS17660;Dbxref=GenBank:WP_000130314.1;Name=WP_000130314.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=CCO47_RS17660;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_000130314.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3570729 3571352 . - . ID=gene-CCO47_RS17665;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=CCO47_RS17665;old_locus_tag=CCO47_17665 NZ_CP075113.1 Protein Homology CDS 3570729 3571352 . - 0 ID=cds-WP_000122257.1;Parent=gene-CCO47_RS17665;Dbxref=GenBank:WP_000122257.1;Name=WP_000122257.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=CCO47_RS17665;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122257.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3571600 3572898 . - . ID=gene-CCO47_RS17670;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=CCO47_RS17670;old_locus_tag=CCO47_17670 NZ_CP075113.1 Protein Homology CDS 3571600 3572898 . - 0 ID=cds-WP_001198403.1;Parent=gene-CCO47_RS17670;Dbxref=GenBank:WP_001198403.1;Name=WP_001198403.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=CCO47_RS17670;product=trigger factor;protein_id=WP_001198403.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3573245 3573562 . - . ID=gene-CCO47_RS17675;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=CCO47_RS17675;old_locus_tag=CCO47_17675 NZ_CP075113.1 Protein Homology CDS 3573245 3573562 . - 0 ID=cds-WP_000973433.1;Parent=gene-CCO47_RS17675;Dbxref=GenBank:WP_000973433.1;Name=WP_000973433.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459442.1;locus_tag=CCO47_RS17675;product=transcriptional regulator BolA;protein_id=WP_000973433.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3573866 3574444 . + . ID=gene-CCO47_RS17680;Name=CCO47_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17680;old_locus_tag=CCO47_17680 NZ_CP075113.1 Protein Homology CDS 3573866 3574444 . + 0 ID=cds-WP_001537832.1;Parent=gene-CCO47_RS17680;Dbxref=GenBank:WP_001537832.1;Name=WP_001537832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=CCO47_RS17680;product=lipoprotein;protein_id=WP_001537832.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3574488 3575963 . + . ID=gene-CCO47_RS17685;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=CCO47_RS17685;old_locus_tag=CCO47_17685 NZ_CP075113.1 Protein Homology CDS 3574488 3575963 . + 0 ID=cds-WP_000098473.1;Parent=gene-CCO47_RS17685;Dbxref=GenBank:WP_000098473.1;Name=WP_000098473.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459440.1;locus_tag=CCO47_RS17685;product=muropeptide MFS transporter AmpG;protein_id=WP_000098473.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3576416 3577372 . + . ID=gene-CCO47_RS17690;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=CCO47_RS17690;old_locus_tag=CCO47_17690 NZ_CP075113.1 Protein Homology CDS 3576416 3577372 . + 0 ID=cds-WP_001239448.1;Parent=gene-CCO47_RS17690;Dbxref=GenBank:WP_001239448.1;Name=WP_001239448.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459439.1;locus_tag=CCO47_RS17690;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_001239448.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3577383 3579374 . + . ID=gene-CCO47_RS17695;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=CCO47_RS17695;old_locus_tag=CCO47_17695 NZ_CP075113.1 Protein Homology CDS 3577383 3579374 . + 0 ID=cds-WP_000467158.1;Parent=gene-CCO47_RS17695;Dbxref=GenBank:WP_000467158.1;Name=WP_000467158.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=CCO47_RS17695;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_000467158.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3579364 3579978 . + . ID=gene-CCO47_RS17700;Name=CCO47_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17700;old_locus_tag=CCO47_17700 NZ_CP075113.1 Protein Homology CDS 3579364 3579978 . + 0 ID=cds-WP_000179833.1;Parent=gene-CCO47_RS17700;Dbxref=GenBank:WP_000179833.1;Name=WP_000179833.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=CCO47_RS17700;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179833.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3579978 3580307 . + . ID=gene-CCO47_RS17705;Name=CCO47_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17705;old_locus_tag=CCO47_17705 NZ_CP075113.1 Protein Homology CDS 3579978 3580307 . + 0 ID=cds-WP_000019878.1;Parent=gene-CCO47_RS17705;Dbxref=GenBank:WP_000019878.1;Name=WP_000019878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459436.1;locus_tag=CCO47_RS17705;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019878.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3580319 3581209 . + . ID=gene-CCO47_RS17710;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=CCO47_RS17710;old_locus_tag=CCO47_17710 NZ_CP075113.1 Protein Homology CDS 3580319 3581209 . + 0 ID=cds-WP_000971352.1;Parent=gene-CCO47_RS17710;Dbxref=GenBank:WP_000971352.1;Name=WP_000971352.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459435.1;locus_tag=CCO47_RS17710;product=heme o synthase;protein_id=WP_000971352.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3581291 3582784 . - . ID=gene-CCO47_RS17715;Name=CCO47_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17715;old_locus_tag=CCO47_17715 NZ_CP075113.1 Protein Homology CDS 3581291 3582784 . - 0 ID=cds-WP_000595934.1;Parent=gene-CCO47_RS17715;Dbxref=GenBank:WP_000595934.1;Name=WP_000595934.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595936.1;locus_tag=CCO47_RS17715;product=tetratricopeptide repeat protein;protein_id=WP_000595934.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3582796 3584307 . - . ID=gene-CCO47_RS17720;Name=CCO47_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17720;old_locus_tag=CCO47_17720 NZ_CP075113.1 Protein Homology CDS 3582796 3584307 . - 0 ID=cds-WP_000403146.1;Parent=gene-CCO47_RS17720;Dbxref=GenBank:WP_000403146.1;Name=WP_000403146.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459433.1;locus_tag=CCO47_RS17720;product=SEL1-like repeat protein;protein_id=WP_000403146.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3584832 3586196 . + . ID=gene-CCO47_RS17725;Name=CCO47_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17725;old_locus_tag=CCO47_17725 NZ_CP075113.1 Protein Homology CDS 3584832 3586196 . + 0 ID=cds-WP_001000925.1;Parent=gene-CCO47_RS17725;Dbxref=GenBank:WP_001000925.1;Name=WP_001000925.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507029.1;locus_tag=CCO47_RS17725;product=MFS transporter;protein_id=WP_001000925.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3586243 3586734 . - . ID=gene-CCO47_RS17730;Name=CCO47_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17730;old_locus_tag=CCO47_17730 NZ_CP075113.1 Protein Homology CDS 3586243 3586734 . - 0 ID=cds-WP_001138913.1;Parent=gene-CCO47_RS17730;Dbxref=GenBank:WP_001138913.1;Name=WP_001138913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=CCO47_RS17730;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_001138913.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3586860 3587771 . + . ID=gene-CCO47_RS17735;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=CCO47_RS17735;old_locus_tag=CCO47_17735 NZ_CP075113.1 Protein Homology CDS 3586860 3587771 . + 0 ID=cds-WP_000705816.1;Parent=gene-CCO47_RS17735;Dbxref=GenBank:WP_000705816.1;Name=WP_000705816.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459429.1;locus_tag=CCO47_RS17735;product=2-dehydropantoate 2-reductase;protein_id=WP_000705816.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3587734 3588324 . + . ID=gene-CCO47_RS17740;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=CCO47_RS17740;old_locus_tag=CCO47_17740 NZ_CP075113.1 Protein Homology CDS 3587734 3588324 . + 0 ID=cds-WP_001275809.1;Parent=gene-CCO47_RS17740;Dbxref=GenBank:WP_001275809.1;Name=WP_001275809.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459428.1;locus_tag=CCO47_RS17740;product=protein deglycase YajL;protein_id=WP_001275809.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3588333 3588415 . - . ID=gene-CCO47_RS24470;Name=CCO47_RS24470;end_range=3588415,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24470;partial=true;pseudo=true;start_range=.,3588333 NZ_CP075113.1 Protein Homology CDS 3588333 3588415 . - 0 ID=cds-CCO47_RS24470;Parent=gene-CCO47_RS24470;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3588415,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO47_RS24470;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3588333;transl_table=11 NZ_CP075113.1 RefSeq gene 3588421 3589230 . - . ID=gene-CCO47_RS17745;Name=phnX;gbkey=Gene;gene=phnX;gene_biotype=protein_coding;locus_tag=CCO47_RS17745;old_locus_tag=CCO47_17745 NZ_CP075113.1 Protein Homology CDS 3588421 3589230 . - 0 ID=cds-WP_001675137.1;Parent=gene-CCO47_RS17745;Dbxref=GenBank:WP_001675137.1;Name=WP_001675137.1;Ontology_term=GO:0019700,GO:0050194;gbkey=CDS;gene=phnX;go_function=phosphonoacetaldehyde hydrolase activity|0050194||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229535.1;locus_tag=CCO47_RS17745;product=phosphonoacetaldehyde hydrolase;protein_id=WP_001675137.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3589240 3590343 . - . ID=gene-CCO47_RS17750;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=CCO47_RS17750;old_locus_tag=CCO47_17750 NZ_CP075113.1 Protein Homology CDS 3589240 3590343 . - 0 ID=cds-WP_000203973.1;Parent=gene-CCO47_RS17750;Dbxref=GenBank:WP_000203973.1;Name=WP_000203973.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;gene=phnW;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459426.1;locus_tag=CCO47_RS17750;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_000203973.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3590483 3591202 . + . ID=gene-CCO47_RS17755;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=CCO47_RS17755;old_locus_tag=CCO47_17755 NZ_CP075113.1 Protein Homology CDS 3590483 3591202 . + 0 ID=cds-WP_000836263.1;Parent=gene-CCO47_RS17755;Dbxref=GenBank:WP_000836263.1;Name=WP_000836263.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=phnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459425.1;locus_tag=CCO47_RS17755;product=phosphonate utilization transcriptional regulator PhnR;protein_id=WP_000836263.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3591400 3592413 . + . ID=gene-CCO47_RS17760;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=CCO47_RS17760;old_locus_tag=CCO47_17760 NZ_CP075113.1 Protein Homology CDS 3591400 3592413 . + 0 ID=cds-WP_000778013.1;Parent=gene-CCO47_RS17760;Dbxref=GenBank:WP_000778013.1;Name=WP_000778013.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=phnS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459424.1;locus_tag=CCO47_RS17760;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_000778013.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3592419 3593528 . + . ID=gene-CCO47_RS17765;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=CCO47_RS17765;old_locus_tag=CCO47_17765 NZ_CP075113.1 Protein Homology CDS 3592419 3593528 . + 0 ID=cds-WP_000928799.1;Parent=gene-CCO47_RS17765;Dbxref=GenBank:WP_000928799.1;Name=WP_000928799.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459423.1;locus_tag=CCO47_RS17765;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WP_000928799.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3593531 3594400 . + . ID=gene-CCO47_RS17770;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=protein_coding;locus_tag=CCO47_RS17770;old_locus_tag=CCO47_17770 NZ_CP075113.1 Protein Homology CDS 3593531 3594400 . + 0 ID=cds-WP_000052717.1;Parent=gene-CCO47_RS17770;Dbxref=GenBank:WP_000052717.1;Name=WP_000052717.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnU;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052714.1;locus_tag=CCO47_RS17770;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_000052717.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3594394 3595191 . + . ID=gene-CCO47_RS17775;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=CCO47_RS17775;old_locus_tag=CCO47_17775 NZ_CP075113.1 Protein Homology CDS 3594394 3595191 . + 0 ID=cds-WP_000909797.1;Parent=gene-CCO47_RS17775;Dbxref=GenBank:WP_000909797.1;Name=WP_000909797.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnV;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=CCO47_RS17775;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WP_000909797.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3595235 3596683 . - . ID=gene-CCO47_RS17780;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=CCO47_RS17780;old_locus_tag=CCO47_17780 NZ_CP075113.1 Protein Homology CDS 3595235 3596683 . - 0 ID=cds-WP_000668652.1;Parent=gene-CCO47_RS17780;Dbxref=GenBank:WP_000668652.1;Name=WP_000668652.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=CCO47_RS17780;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_000668652.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3596893 3597135 . + . ID=gene-CCO47_RS17785;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=CCO47_RS17785;old_locus_tag=CCO47_17785 NZ_CP075113.1 Protein Homology CDS 3596893 3597135 . + 0 ID=cds-WP_001124944.1;Parent=gene-CCO47_RS17785;Dbxref=GenBank:WP_001124944.1;Name=WP_001124944.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459419.1;locus_tag=CCO47_RS17785;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124944.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3597136 3598035 . + . ID=gene-CCO47_RS17790;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=CCO47_RS17790;old_locus_tag=CCO47_17790 NZ_CP075113.1 Protein Homology CDS 3597136 3598035 . + 0 ID=cds-WP_000348074.1;Parent=gene-CCO47_RS17790;Dbxref=GenBank:WP_000348074.1;Name=WP_000348074.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459418.1;locus_tag=CCO47_RS17790;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000348074.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3598059 3599921 . + . ID=gene-CCO47_RS17795;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=CCO47_RS17795;old_locus_tag=CCO47_17795 NZ_CP075113.1 Protein Homology CDS 3598059 3599921 . + 0 ID=cds-WP_000006777.1;Parent=gene-CCO47_RS17795;Dbxref=GenBank:WP_000006777.1;Name=WP_000006777.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459417.1;locus_tag=CCO47_RS17795;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_000006777.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3599978 3600952 . + . ID=gene-CCO47_RS17800;Name=CCO47_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17800;old_locus_tag=CCO47_17800 NZ_CP075113.1 Protein Homology CDS 3599978 3600952 . + 0 ID=cds-WP_001199872.1;Parent=gene-CCO47_RS17800;Dbxref=GenBank:WP_001199872.1;Name=WP_001199872.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459416.1;locus_tag=CCO47_RS17800;product=aldo/keto reductase;protein_id=WP_001199872.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3600960 3601051 . + . ID=gene-CCO47_RS24475;Name=CCO47_RS24475;end_range=3601051,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24475;partial=true;pseudo=true;start_range=.,3600960 NZ_CP075113.1 Protein Homology CDS 3600960 3601051 . + 0 ID=cds-CCO47_RS24475;Parent=gene-CCO47_RS24475;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3601051,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO47_RS24475;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3600960;transl_table=11 NZ_CP075113.1 RefSeq gene 3601056 3601571 . - . ID=gene-CCO47_RS17805;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=CCO47_RS17805;old_locus_tag=CCO47_17805 NZ_CP075113.1 Protein Homology CDS 3601056 3601571 . - 0 ID=cds-WP_000154065.1;Parent=gene-CCO47_RS17805;Dbxref=GenBank:WP_000154065.1;Name=WP_000154065.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459415.1;locus_tag=CCO47_RS17805;product=phosphatidylglycerophosphatase A;protein_id=WP_000154065.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3601549 3602529 . - . ID=gene-CCO47_RS17810;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=CCO47_RS17810;old_locus_tag=CCO47_17810 NZ_CP075113.1 Protein Homology CDS 3601549 3602529 . - 0 ID=cds-WP_000742083.1;Parent=gene-CCO47_RS17810;Dbxref=GenBank:WP_000742083.1;Name=WP_000742083.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308497.1;locus_tag=CCO47_RS17810;product=thiamine-phosphate kinase;protein_id=WP_000742083.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3602608 3603027 . - . ID=gene-CCO47_RS17815;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=CCO47_RS17815;old_locus_tag=CCO47_17815 NZ_CP075113.1 Protein Homology CDS 3602608 3603027 . - 0 ID=cds-WP_000801129.1;Parent=gene-CCO47_RS17815;Dbxref=GenBank:WP_000801129.1;Name=WP_000801129.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=CCO47_RS17815;product=transcription antitermination factor NusB;protein_id=WP_000801129.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3603048 3603518 . - . ID=gene-CCO47_RS17820;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=CCO47_RS17820;old_locus_tag=CCO47_17820 NZ_CP075113.1 Protein Homology CDS 3603048 3603518 . - 0 ID=cds-WP_001021372.1;Parent=gene-CCO47_RS17820;Dbxref=GenBank:WP_001021372.1;Name=WP_001021372.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=CCO47_RS17820;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021372.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3603607 3604710 . - . ID=gene-CCO47_RS17825;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=CCO47_RS17825;old_locus_tag=CCO47_17825 NZ_CP075113.1 Protein Homology CDS 3603607 3604710 . - 0 ID=cds-WP_001150229.1;Parent=gene-CCO47_RS17825;Dbxref=GenBank:WP_001150229.1;Name=WP_001150229.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459411.1;locus_tag=CCO47_RS17825;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_001150229.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3604714 3605163 . - . ID=gene-CCO47_RS17830;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=CCO47_RS17830;old_locus_tag=CCO47_17830 NZ_CP075113.1 Protein Homology CDS 3604714 3605163 . - 0 ID=cds-WP_000543533.1;Parent=gene-CCO47_RS17830;Dbxref=GenBank:WP_000543533.1;Name=WP_000543533.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=CCO47_RS17830;product=transcriptional regulator NrdR;protein_id=WP_000543533.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3605315 3605854 . + . ID=gene-CCO47_RS17835;Name=CCO47_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17835;old_locus_tag=CCO47_17835 NZ_CP075113.1 Protein Homology CDS 3605315 3605854 . + 0 ID=cds-WP_000198484.1;Parent=gene-CCO47_RS17835;Dbxref=GenBank:WP_000198484.1;Name=WP_000198484.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459409.1;locus_tag=CCO47_RS17835;product=SadB/YajI family lipoprotein;protein_id=WP_000198484.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3606154 3607017 . + . ID=gene-CCO47_RS17840;Name=CCO47_RS17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17840;old_locus_tag=CCO47_17840 NZ_CP075113.1 Protein Homology CDS 3606154 3607017 . + 0 ID=cds-WP_000752021.1;Parent=gene-CCO47_RS17840;Dbxref=GenBank:WP_000752021.1;Name=WP_000752021.1;Ontology_term=GO:0015858,GO:0015471,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside-specific channel forming porin activity|0015471||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459408.1;locus_tag=CCO47_RS17840;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_000752021.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3607101 3607208 . - . ID=gene-CCO47_RS24370;Name=CCO47_RS24370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24370;old_locus_tag=CCO47_17845 NZ_CP075113.1 Protein Homology CDS 3607101 3607208 . - 0 ID=cds-WP_000176312.1;Parent=gene-CCO47_RS24370;Dbxref=GenBank:WP_000176312.1;Name=WP_000176312.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025308.7;locus_tag=CCO47_RS24370;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000176312.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3607646 3607993 . - . ID=gene-CCO47_RS17850;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=CCO47_RS17850;old_locus_tag=CCO47_17850 NZ_CP075113.1 Protein Homology CDS 3607646 3607993 . - 0 ID=cds-WP_000974818.1;Parent=gene-CCO47_RS17850;Dbxref=GenBank:WP_000974818.1;Name=WP_000974818.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459406.1;locus_tag=CCO47_RS17850;product=HNH nuclease YajD;protein_id=WP_000974818.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3608163 3608855 . - . ID=gene-CCO47_RS17855;Name=CCO47_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17855;old_locus_tag=CCO47_17855 NZ_CP075113.1 Protein Homology CDS 3608163 3608855 . - 0 ID=cds-WP_000198318.1;Parent=gene-CCO47_RS17855;Dbxref=GenBank:WP_000198318.1;Name=WP_000198318.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459405.1;locus_tag=CCO47_RS17855;product=helix-turn-helix transcriptional regulator;protein_id=WP_000198318.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3608881 3609246 . - . ID=gene-CCO47_RS17860;Name=CCO47_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17860;old_locus_tag=CCO47_17860 NZ_CP075113.1 Protein Homology CDS 3608881 3609246 . - 0 ID=cds-WP_000793035.1;Parent=gene-CCO47_RS17860;Dbxref=GenBank:WP_000793035.1;Name=WP_000793035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459404.1;locus_tag=CCO47_RS17860;product=VOC family protein;protein_id=WP_000793035.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3609391 3610362 . - . ID=gene-CCO47_RS17865;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=CCO47_RS17865;old_locus_tag=CCO47_17865 NZ_CP075113.1 Protein Homology CDS 3609391 3610362 . - 0 ID=cds-WP_000046629.1;Parent=gene-CCO47_RS17865;Dbxref=GenBank:WP_000046629.1;Name=WP_000046629.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459403.1;locus_tag=CCO47_RS17865;product=protein translocase subunit SecF;protein_id=WP_000046629.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3610373 3612220 . - . ID=gene-CCO47_RS17870;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=CCO47_RS17870;old_locus_tag=CCO47_17870 NZ_CP075113.1 Protein Homology CDS 3610373 3612220 . - 0 ID=cds-WP_000934811.1;Parent=gene-CCO47_RS17870;Dbxref=GenBank:WP_000934811.1;Name=WP_000934811.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=CCO47_RS17870;product=protein translocase subunit SecD;protein_id=WP_000934811.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3612248 3612580 . - . ID=gene-CCO47_RS17875;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=CCO47_RS17875;old_locus_tag=CCO47_17875 NZ_CP075113.1 Protein Homology CDS 3612248 3612580 . - 0 ID=cds-WP_000007628.1;Parent=gene-CCO47_RS17875;Dbxref=GenBank:WP_000007628.1;Name=WP_000007628.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=CCO47_RS17875;product=preprotein translocase subunit YajC;protein_id=WP_000007628.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3612603 3613730 . - . ID=gene-CCO47_RS17880;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=CCO47_RS17880;old_locus_tag=CCO47_17880 NZ_CP075113.1 Protein Homology CDS 3612603 3613730 . - 0 ID=cds-WP_000667302.1;Parent=gene-CCO47_RS17880;Dbxref=GenBank:WP_000667302.1;Name=WP_000667302.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=CCO47_RS17880;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000667302.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3613927 3614991 . - . ID=gene-CCO47_RS17885;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=CCO47_RS17885;old_locus_tag=CCO47_17885 NZ_CP075113.1 Protein Homology CDS 3613927 3614991 . - 0 ID=cds-WP_001266522.1;Parent=gene-CCO47_RS17885;Dbxref=GenBank:WP_001266522.1;Name=WP_001266522.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=CCO47_RS17885;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266522.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3615085 3615666 . + . ID=gene-CCO47_RS17890;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=CCO47_RS17890;old_locus_tag=CCO47_17890 NZ_CP075113.1 Protein Homology CDS 3615085 3615666 . + 0 ID=cds-WP_001009855.1;Parent=gene-CCO47_RS17890;Dbxref=GenBank:WP_001009855.1;Name=WP_001009855.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459398.1;locus_tag=CCO47_RS17890;product=ACP phosphodiesterase;protein_id=WP_001009855.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3615876 3616478 . + . ID=gene-CCO47_RS17895;Name=CCO47_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17895;old_locus_tag=CCO47_17895 NZ_CP075113.1 Protein Homology CDS 3615876 3616478 . + 0 ID=cds-WP_000244731.1;Parent=gene-CCO47_RS17895;Dbxref=GenBank:WP_000244731.1;Name=WP_000244731.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459397.1;locus_tag=CCO47_RS17895;product=peroxiredoxin;protein_id=WP_000244731.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3616550 3618367 . - . ID=gene-CCO47_RS17900;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=pseudogene;locus_tag=CCO47_RS17900;old_locus_tag=CCO47_17900;pseudo=true NZ_CP075113.1 Protein Homology CDS 3616550 3618367 . - 0 ID=cds-CCO47_RS17900;Parent=gene-CCO47_RS17900;Note=internal stop;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459396.1;locus_tag=CCO47_RS17900;product=maltodextrin glucosidase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3618529 3619899 . - . ID=gene-CCO47_RS17905;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=CCO47_RS17905;old_locus_tag=CCO47_17905 NZ_CP075113.1 Protein Homology CDS 3618529 3619899 . - 0 ID=cds-WP_001537837.1;Parent=gene-CCO47_RS17905;Dbxref=GenBank:WP_001537837.1;Name=WP_001537837.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=CCO47_RS17905;product=proline-specific permease ProY;protein_id=WP_001537837.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3619974 3621293 . - . ID=gene-CCO47_RS17910;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=CCO47_RS17910;old_locus_tag=CCO47_17910 NZ_CP075113.1 Protein Homology CDS 3619974 3621293 . - 0 ID=cds-WP_000149619.1;Parent=gene-CCO47_RS17910;Dbxref=GenBank:WP_000149619.1;Name=WP_000149619.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459394.1;locus_tag=CCO47_RS17910;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_000149619.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3621702 3622997 . - . ID=gene-CCO47_RS17915;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=CCO47_RS17915;old_locus_tag=CCO47_17915 NZ_CP075113.1 Protein Homology CDS 3621702 3622997 . - 0 ID=cds-WP_000893636.1;Parent=gene-CCO47_RS17915;Dbxref=GenBank:WP_000893636.1;Name=WP_000893636.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459393.1;locus_tag=CCO47_RS17915;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_000893636.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3623067 3623756 . - . ID=gene-CCO47_RS17920;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=CCO47_RS17920;old_locus_tag=CCO47_17920 NZ_CP075113.1 Protein Homology CDS 3623067 3623756 . - 0 ID=cds-WP_000113921.1;Parent=gene-CCO47_RS17920;Dbxref=GenBank:WP_000113921.1;Name=WP_000113921.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=CCO47_RS17920;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113921.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3623970 3625172 . + . ID=gene-CCO47_RS17925;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=CCO47_RS17925;old_locus_tag=CCO47_17925 NZ_CP075113.1 Protein Homology CDS 3623970 3625172 . + 0 ID=cds-WP_001221264.1;Parent=gene-CCO47_RS17925;Dbxref=GenBank:WP_001221264.1;Name=WP_001221264.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=CCO47_RS17925;product=exonuclease subunit SbcD;protein_id=WP_001221264.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3625169 3628309 . + . ID=gene-CCO47_RS17930;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=CCO47_RS17930;old_locus_tag=CCO47_17930 NZ_CP075113.1 Protein Homology CDS 3625169 3628309 . + 0 ID=cds-WP_001573932.1;Parent=gene-CCO47_RS17930;Dbxref=GenBank:WP_001573932.1;Name=WP_001573932.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=CCO47_RS17930;product=exonuclease subunit SbcC;protein_id=WP_001573932.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3628482 3629654 . + . ID=gene-CCO47_RS17935;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=CCO47_RS17935;old_locus_tag=CCO47_17935 NZ_CP075113.1 Protein Homology CDS 3628482 3629654 . + 0 ID=cds-WP_000755619.1;Parent=gene-CCO47_RS17935;Dbxref=GenBank:WP_000755619.1;Name=WP_000755619.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=CCO47_RS17935;product=MFS transporter AraJ;protein_id=WP_000755619.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3629676 3630584 . - . ID=gene-CCO47_RS17940;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=CCO47_RS17940;old_locus_tag=CCO47_17940 NZ_CP075113.1 Protein Homology CDS 3629676 3630584 . - 0 ID=cds-WP_001219271.1;Parent=gene-CCO47_RS17940;Dbxref=GenBank:WP_001219271.1;Name=WP_001219271.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459388.1;locus_tag=CCO47_RS17940;product=fructokinase;protein_id=WP_001219271.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3630710 3631621 . + . ID=gene-CCO47_RS17945;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=CCO47_RS17945;old_locus_tag=CCO47_17945 NZ_CP075113.1 Protein Homology CDS 3630710 3631621 . + 0 ID=cds-WP_000964305.1;Parent=gene-CCO47_RS17945;Dbxref=GenBank:WP_000964305.1;Name=WP_000964305.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=CCO47_RS17945;product=recombination-associated protein RdgC;protein_id=WP_000964305.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3631659 3631943 . - . ID=gene-CCO47_RS17950;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=CCO47_RS17950;old_locus_tag=CCO47_17950 NZ_CP075113.1 Protein Homology CDS 3631659 3631943 . - 0 ID=cds-WP_000941953.1;Parent=gene-CCO47_RS17950;Dbxref=GenBank:WP_000941953.1;Name=WP_000941953.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459386.1;locus_tag=CCO47_RS17950;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_000941953.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3632014 3632691 . - . ID=gene-CCO47_RS17955;Name=CCO47_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17955;old_locus_tag=CCO47_17955 NZ_CP075113.1 Protein Homology CDS 3632014 3632691 . - 0 ID=cds-WP_001276437.1;Parent=gene-CCO47_RS17955;Dbxref=GenBank:WP_001276437.1;Name=WP_001276437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459385.1;locus_tag=CCO47_RS17955;product=AroM family protein;protein_id=WP_001276437.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3632942 3633133 . - . ID=gene-CCO47_RS17960;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=CCO47_RS17960;old_locus_tag=CCO47_17960 NZ_CP075113.1 Protein Homology CDS 3632942 3633133 . - 0 ID=cds-WP_001143161.1;Parent=gene-CCO47_RS17960;Dbxref=GenBank:WP_001143161.1;Name=WP_001143161.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=CCO47_RS17960;product=protein YaiA;protein_id=WP_001143161.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3633160 3633705 . - . ID=gene-CCO47_RS17965;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=CCO47_RS17965;old_locus_tag=CCO47_17965 NZ_CP075113.1 Protein Homology CDS 3633160 3633705 . - 0 ID=cds-WP_000983565.1;Parent=gene-CCO47_RS17965;Dbxref=GenBank:WP_000983565.1;Name=WP_000983565.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459383.1;locus_tag=CCO47_RS17965;product=shikimate kinase AroL;protein_id=WP_000983565.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3633907 3634362 . - . ID=gene-CCO47_RS17970;Name=CCO47_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS17970;old_locus_tag=CCO47_17970 NZ_CP075113.1 Protein Homology CDS 3633907 3634362 . - 0 ID=cds-WP_000158137.1;Parent=gene-CCO47_RS17970;Dbxref=GenBank:WP_000158137.1;Name=WP_000158137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459382.1;locus_tag=CCO47_RS17970;product=YaiI/YqxD family protein;protein_id=WP_000158137.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3634502 3635311 . + . ID=gene-CCO47_RS17975;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=CCO47_RS17975;old_locus_tag=CCO47_17975 NZ_CP075113.1 Protein Homology CDS 3634502 3635311 . + 0 ID=cds-WP_000412193.1;Parent=gene-CCO47_RS17975;Dbxref=GenBank:WP_000412193.1;Name=WP_000412193.1;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459381.1;locus_tag=CCO47_RS17975;product=pyrroline-5-carboxylate reductase;protein_id=WP_000412193.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3635326 3636438 . - . ID=gene-CCO47_RS17980;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=CCO47_RS17980;old_locus_tag=CCO47_17980 NZ_CP075113.1 Protein Homology CDS 3635326 3636438 . - 0 ID=cds-WP_000484098.1;Parent=gene-CCO47_RS17980;Dbxref=GenBank:WP_000484098.1;Name=WP_000484098.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459380.1;locus_tag=CCO47_RS17980;product=diguanylate cyclase AdrA;protein_id=WP_000484098.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3636530 3636850 . - . ID=gene-CCO47_RS17985;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=CCO47_RS17985;old_locus_tag=CCO47_17985 NZ_CP075113.1 Protein Homology CDS 3636530 3636850 . - 0 ID=cds-WP_000705165.1;Parent=gene-CCO47_RS17985;Dbxref=GenBank:WP_000705165.1;Name=WP_000705165.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459379.1;locus_tag=CCO47_RS17985;product=phosphate starvation-inducible protein PsiF;protein_id=WP_000705165.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3637203 3637463 . - . ID=gene-CCO47_RS17990;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=CCO47_RS17990;old_locus_tag=CCO47_17990 NZ_CP075113.1 Protein Homology CDS 3637203 3637463 . - 0 ID=cds-WP_001518423.1;Parent=gene-CCO47_RS17990;Dbxref=GenBank:WP_001518423.1;Name=WP_001518423.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748986.1;locus_tag=CCO47_RS17990;product=anti-adapter protein IraP;protein_id=WP_001518423.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3637760 3638971 . - . ID=gene-CCO47_RS17995;Name=CCO47_RS17995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS17995;old_locus_tag=CCO47_17995;pseudo=true NZ_CP075113.1 Protein Homology CDS 3637760 3638971 . - 0 ID=cds-CCO47_RS17995;Parent=gene-CCO47_RS17995;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=CCO47_RS17995;product=multidrug efflux MFS transporter;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3639140 3639853 . - . ID=gene-CCO47_RS18000;Name=CCO47_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18000;old_locus_tag=CCO47_18000 NZ_CP075113.1 Protein Homology CDS 3639140 3639853 . - 0 ID=cds-WP_000480794.1;Parent=gene-CCO47_RS18000;Dbxref=GenBank:WP_000480794.1;Name=WP_000480794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459376.1;locus_tag=CCO47_RS18000;product=extensin-like domain-containing protein;protein_id=WP_000480794.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3639931 3641025 . + . ID=gene-CCO47_RS18005;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=CCO47_RS18005;old_locus_tag=CCO47_18005 NZ_CP075113.1 Protein Homology CDS 3639931 3641025 . + 0 ID=cds-WP_001096593.1;Parent=gene-CCO47_RS18005;Dbxref=GenBank:WP_001096593.1;Name=WP_001096593.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459375.1;locus_tag=CCO47_RS18005;product=D-alanine--D-alanine ligase;protein_id=WP_001096593.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3641051 3641266 . - . ID=gene-CCO47_RS18010;Name=CCO47_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18010;old_locus_tag=CCO47_18010 NZ_CP075113.1 Protein Homology CDS 3641051 3641266 . - 0 ID=cds-WP_001239244.1;Parent=gene-CCO47_RS18010;Dbxref=GenBank:WP_001239244.1;Name=WP_001239244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459374.1;locus_tag=CCO47_RS18010;product=DUF2754 family protein;protein_id=WP_001239244.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3641534 3641842 . + . ID=gene-CCO47_RS18015;Name=CCO47_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18015;old_locus_tag=CCO47_18015 NZ_CP075113.1 Protein Homology CDS 3641534 3641842 . + 0 ID=cds-WP_000763139.1;Parent=gene-CCO47_RS18015;Dbxref=GenBank:WP_000763139.1;Name=WP_000763139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459373.1;locus_tag=CCO47_RS18015;product=YaiY family protein;protein_id=WP_000763139.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3641880 3642974 . - . ID=gene-CCO47_RS18020;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=CCO47_RS18020;old_locus_tag=CCO47_18020 NZ_CP075113.1 Protein Homology CDS 3641880 3642974 . - 0 ID=cds-WP_001271421.1;Parent=gene-CCO47_RS18020;Dbxref=GenBank:WP_001271421.1;Name=WP_001271421.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459372.1;locus_tag=CCO47_RS18020;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_001271421.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3642989 3644209 . - . ID=gene-CCO47_RS18025;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=CCO47_RS18025;old_locus_tag=CCO47_18025 NZ_CP075113.1 Protein Homology CDS 3642989 3644209 . - 0 ID=cds-WP_000477019.1;Parent=gene-CCO47_RS18025;Dbxref=GenBank:WP_000477019.1;Name=WP_000477019.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459371.1;locus_tag=CCO47_RS18025;product=peptide antibiotic transporter SbmA;protein_id=WP_000477019.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3644556 3645713 . + . ID=gene-CCO47_RS18030;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=CCO47_RS18030;old_locus_tag=CCO47_18030 NZ_CP075113.1 Protein Homology CDS 3644556 3645713 . + 0 ID=cds-WP_000830780.1;Parent=gene-CCO47_RS18030;Dbxref=GenBank:WP_000830780.1;Name=WP_000830780.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=CCO47_RS18030;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_000830780.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3645758 3646381 . - . ID=gene-CCO47_RS18035;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=CCO47_RS18035;old_locus_tag=CCO47_18035 NZ_CP075113.1 Protein Homology CDS 3645758 3646381 . - 0 ID=cds-WP_000950242.1;Parent=gene-CCO47_RS18035;Dbxref=GenBank:WP_000950242.1;Name=WP_000950242.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459369.1;locus_tag=CCO47_RS18035;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_000950242.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3646467 3649412 . - . ID=gene-CCO47_RS18040;Name=CCO47_RS18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18040;old_locus_tag=CCO47_18040 NZ_CP075113.1 Protein Homology CDS 3646467 3649412 . - 0 ID=cds-WP_000556539.1;Parent=gene-CCO47_RS18040;Dbxref=GenBank:WP_000556539.1;Name=WP_000556539.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459368.1;locus_tag=CCO47_RS18040;product=autotransporter YaiT-related protein;protein_id=WP_000556539.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3649925 3650899 . + . ID=gene-CCO47_RS18045;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=CCO47_RS18045;old_locus_tag=CCO47_18045 NZ_CP075113.1 Protein Homology CDS 3649925 3650899 . + 0 ID=cds-WP_000130728.1;Parent=gene-CCO47_RS18045;Dbxref=GenBank:WP_000130728.1;Name=WP_000130728.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459367.1;locus_tag=CCO47_RS18045;product=porphobilinogen synthase;protein_id=WP_000130728.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3651003 3652889 . - . ID=gene-CCO47_RS18050;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=CCO47_RS18050;old_locus_tag=CCO47_18050 NZ_CP075113.1 Protein Homology CDS 3651003 3652889 . - 0 ID=cds-WP_000010229.1;Parent=gene-CCO47_RS18050;Dbxref=GenBank:WP_000010229.1;Name=WP_000010229.1;Ontology_term=GO:0019629,GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=CCO47_RS18050;product=propionate--CoA ligase;protein_id=WP_000010229.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3652930 3654381 . - . ID=gene-CCO47_RS18055;Name=CCO47_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18055;old_locus_tag=CCO47_18055 NZ_CP075113.1 Protein Homology CDS 3652930 3654381 . - 0 ID=cds-WP_001272702.1;Parent=gene-CCO47_RS18055;Dbxref=GenBank:WP_001272702.1;Name=WP_001272702.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459365.1;locus_tag=CCO47_RS18055;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WP_001272702.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3654419 3655588 . - . ID=gene-CCO47_RS18060;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=CCO47_RS18060;old_locus_tag=CCO47_18060 NZ_CP075113.1 Protein Homology CDS 3654419 3655588 . - 0 ID=cds-WP_000132748.1;Parent=gene-CCO47_RS18060;Dbxref=GenBank:WP_000132748.1;Name=WP_000132748.1;Ontology_term=GO:0019679,GO:0036440,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate synthase activity|0036440||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459364.1;locus_tag=CCO47_RS18060;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_000132748.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3655711 3656598 . - . ID=gene-CCO47_RS18065;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=CCO47_RS18065;old_locus_tag=CCO47_18065 NZ_CP075113.1 Protein Homology CDS 3655711 3656598 . - 0 ID=cds-WP_000052227.1;Parent=gene-CCO47_RS18065;Dbxref=GenBank:WP_000052227.1;Name=WP_000052227.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459363.1;locus_tag=CCO47_RS18065;product=methylisocitrate lyase;protein_id=WP_000052227.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3656864 3658397 . + . ID=gene-CCO47_RS18070;Name=CCO47_RS18070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS18070;old_locus_tag=CCO47_18070;pseudo=true NZ_CP075113.1 Protein Homology CDS 3656864 3658397 . + 0 ID=cds-CCO47_RS18070;Parent=gene-CCO47_RS18070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459362.1;locus_tag=CCO47_RS18070;product=sigma-54-dependent Fis family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3658533 3658808 . - . ID=gene-CCO47_RS18075;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=CCO47_RS18075;old_locus_tag=CCO47_18075 NZ_CP075113.1 Protein Homology CDS 3658533 3658808 . - 0 ID=cds-WP_000848026.1;Parent=gene-CCO47_RS18075;Dbxref=GenBank:WP_000848026.1;Name=WP_000848026.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459361.1;locus_tag=CCO47_RS18075;product=DUF1471 family periplasmic protein YahO;protein_id=WP_000848026.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3659040 3659672 . + . ID=gene-CCO47_RS18080;Name=CCO47_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18080;old_locus_tag=CCO47_18080 NZ_CP075113.1 Protein Homology CDS 3659040 3659672 . + 0 ID=cds-WP_000433131.1;Parent=gene-CCO47_RS18080;Dbxref=GenBank:WP_000433131.1;Name=WP_000433131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459360.1;locus_tag=CCO47_RS18080;product=LysE family transporter;protein_id=WP_000433131.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3659711 3661819 . - . ID=gene-CCO47_RS18085;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=pseudogene;locus_tag=CCO47_RS18085;old_locus_tag=CCO47_18085;pseudo=true NZ_CP075113.1 Protein Homology CDS 3659711 3661819 . - 0 ID=cds-CCO47_RS18085;Parent=gene-CCO47_RS18085;Note=internal stop;Ontology_term=GO:0015344,GO:0038023;gbkey=CDS;gene=foxA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=CCO47_RS18085;product=ferrioxamine B receptor FoxA;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3661965 3662969 . - . ID=gene-CCO47_RS18090;Name=foxR;gbkey=Gene;gene=foxR;gene_biotype=protein_coding;locus_tag=CCO47_RS18090;old_locus_tag=CCO47_18090 NZ_CP075113.1 Protein Homology CDS 3661965 3662969 . - 0 ID=cds-WP_000074605.1;Parent=gene-CCO47_RS18090;Dbxref=GenBank:WP_000074605.1;Name=WP_000074605.1;gbkey=CDS;gene=foxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459358.1;locus_tag=CCO47_RS18090;product=ferrioxamine uptake transcriptional regulator FoxR;protein_id=WP_000074605.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3663065 3663256 . - . ID=gene-CCO47_RS24275;Name=CCO47_RS24275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24275 NZ_CP075113.1 Protein Homology CDS 3663065 3663256 . - 0 ID=cds-WP_229023857.1;Parent=gene-CCO47_RS24275;Dbxref=GenBank:WP_229023857.1;Name=WP_229023857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459357.3;locus_tag=CCO47_RS24275;product=hypothetical protein;protein_id=WP_229023857.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3663175 3663360 . - . ID=gene-CCO47_RS24480;Name=CCO47_RS24480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24480;old_locus_tag=CCO47_18095 NZ_CP075113.1 Protein Homology CDS 3663175 3663360 . - 0 ID=cds-WP_305954967.1;Parent=gene-CCO47_RS24480;Dbxref=GenBank:WP_305954967.1;Name=WP_305954967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022085.7;locus_tag=CCO47_RS24480;product=DUF2474 domain-containing protein;protein_id=WP_305954967.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3663306 3664316 . - . ID=gene-CCO47_RS18100;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=CCO47_RS18100;old_locus_tag=CCO47_18100 NZ_CP075113.1 Protein Homology CDS 3663306 3664316 . - 0 ID=cds-WP_000151049.1;Parent=gene-CCO47_RS18100;Dbxref=GenBank:WP_000151049.1;Name=WP_000151049.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=CCO47_RS18100;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000151049.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3664313 3665716 . - . ID=gene-CCO47_RS18105;Name=CCO47_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18105;old_locus_tag=CCO47_18105 NZ_CP075113.1 Protein Homology CDS 3664313 3665716 . - 0 ID=cds-WP_000393711.1;Parent=gene-CCO47_RS18105;Dbxref=GenBank:WP_000393711.1;Name=WP_000393711.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459355.1;locus_tag=CCO47_RS18105;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000393711.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3665833 3665934 . - . ID=gene-CCO47_RS18110;Name=ssaA;gbkey=Gene;gene=ssaA;gene_biotype=protein_coding;locus_tag=CCO47_RS18110;old_locus_tag=CCO47_18110 NZ_CP075113.1 Protein Homology CDS 3665833 3665934 . - 0 ID=cds-WP_000934834.1;Parent=gene-CCO47_RS18110;Dbxref=GenBank:WP_000934834.1;Name=WP_000934834.1;gbkey=CDS;gene=ssaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=CCO47_RS18110;product=small effector SsaA;protein_id=WP_000934834.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3666211 3669183 . - . ID=gene-CCO47_RS18115;Name=CCO47_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18115;old_locus_tag=CCO47_18115 NZ_CP075113.1 Protein Homology CDS 3666211 3669183 . - 0 ID=cds-WP_077906640.1;Parent=gene-CCO47_RS18115;Dbxref=GenBank:WP_077906640.1;Name=WP_077906640.1;Ontology_term=GO:0003677,GO:0016788;gbkey=CDS;go_function=DNA binding|0003677||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=CCO47_RS18115;product=type III restriction-modification system endonuclease;protein_id=WP_077906640.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3669193 3671151 . - . ID=gene-CCO47_RS18120;Name=CCO47_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18120;old_locus_tag=CCO47_18120 NZ_CP075113.1 Protein Homology CDS 3669193 3671151 . - 0 ID=cds-WP_000910371.1;Parent=gene-CCO47_RS18120;Dbxref=GenBank:WP_000910371.1;Name=WP_000910371.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459352.1;locus_tag=CCO47_RS18120;product=site-specific DNA-methyltransferase;protein_id=WP_000910371.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3671340 3672593 . - . ID=gene-CCO47_RS18125;Name=CCO47_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18125;old_locus_tag=CCO47_18125 NZ_CP075113.1 Protein Homology CDS 3671340 3672593 . - 0 ID=cds-WP_000288501.1;Parent=gene-CCO47_RS18125;Dbxref=GenBank:WP_000288501.1;Name=WP_000288501.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459351.1;locus_tag=CCO47_RS18125;product=MFS transporter;protein_id=WP_000288501.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3672886 3673080 . - . ID=gene-CCO47_RS18130;Name=golB;gbkey=Gene;gene=golB;gene_biotype=protein_coding;locus_tag=CCO47_RS18130;old_locus_tag=CCO47_18130 NZ_CP075113.1 Protein Homology CDS 3672886 3673080 . - 0 ID=cds-WP_001159469.1;Parent=gene-CCO47_RS18130;Dbxref=GenBank:WP_001159469.1;Name=WP_001159469.1;gbkey=CDS;gene=golB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459350.1;locus_tag=CCO47_RS18130;product=gold resistance metallochaperone GolB;protein_id=WP_001159469.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3673158 3673622 . - . ID=gene-CCO47_RS18135;Name=golS;gbkey=Gene;gene=golS;gene_biotype=protein_coding;locus_tag=CCO47_RS18135;old_locus_tag=CCO47_18135 NZ_CP075113.1 Protein Homology CDS 3673158 3673622 . - 0 ID=cds-WP_001020586.1;Parent=gene-CCO47_RS18135;Dbxref=GenBank:WP_001020586.1;Name=WP_001020586.1;gbkey=CDS;gene=golS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459349.1;locus_tag=CCO47_RS18135;product=Au(I) sensor transcriptional regulator GolS;protein_id=WP_001020586.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3673619 3675922 . - . ID=gene-CCO47_RS18140;Name=golT;gbkey=Gene;gene=golT;gene_biotype=protein_coding;locus_tag=CCO47_RS18140;old_locus_tag=CCO47_18140 NZ_CP075113.1 Protein Homology CDS 3673619 3675922 . - 0 ID=cds-WP_000083303.1;Parent=gene-CCO47_RS18140;Dbxref=GenBank:WP_000083303.1;Name=WP_000083303.1;gbkey=CDS;gene=golT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083318.1;locus_tag=CCO47_RS18140;product=gold/copper-translocating P-type ATPase GolT;protein_id=WP_000083303.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3676199 3677425 . + . ID=gene-CCO47_RS18145;Name=mdsA;gbkey=Gene;gene=mdsA;gene_biotype=protein_coding;locus_tag=CCO47_RS18145;old_locus_tag=CCO47_18145 NZ_CP075113.1 Protein Homology CDS 3676199 3677425 . + 0 ID=cds-WP_001254863.1;Parent=gene-CCO47_RS18145;Dbxref=GenBank:WP_001254863.1;Name=WP_001254863.1;gbkey=CDS;gene=mdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=CCO47_RS18145;product=multidrug efflux RND transporter periplasmic adaptor subunit MdsA;protein_id=WP_001254863.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3677422 3680589 . + . ID=gene-CCO47_RS18150;Name=mdsB;gbkey=Gene;gene=mdsB;gene_biotype=protein_coding;locus_tag=CCO47_RS18150;old_locus_tag=CCO47_18150 NZ_CP075113.1 Protein Homology CDS 3677422 3680589 . + 0 ID=cds-WP_000673145.1;Parent=gene-CCO47_RS18150;Dbxref=GenBank:WP_000673145.1;Name=WP_000673145.1;gbkey=CDS;gene=mdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=CCO47_RS18150;product=multidrug efflux RND transporter permease subunit MdsB;protein_id=WP_000673145.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3680606 3682063 . + . ID=gene-CCO47_RS18155;Name=mdsC;gbkey=Gene;gene=mdsC;gene_biotype=protein_coding;locus_tag=CCO47_RS18155;old_locus_tag=CCO47_18155 NZ_CP075113.1 Protein Homology CDS 3680606 3682063 . + 0 ID=cds-WP_125831846.1;Parent=gene-CCO47_RS18155;Dbxref=GenBank:WP_125831846.1;Name=WP_125831846.1;gbkey=CDS;gene=mdsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521068.1;locus_tag=CCO47_RS18155;product=multidrug efflux transporter outer membrane subunit MdsC;protein_id=WP_125831846.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3682133 3682492 . - . ID=gene-CCO47_RS18160;Name=CCO47_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18160;old_locus_tag=CCO47_18160 NZ_CP075113.1 Protein Homology CDS 3682133 3682492 . - 0 ID=cds-WP_000722978.1;Parent=gene-CCO47_RS18160;Dbxref=GenBank:WP_000722978.1;Name=WP_000722978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459344.1;locus_tag=CCO47_RS18160;product=DUF4156 domain-containing protein;protein_id=WP_000722978.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3682550 3682774 . - . ID=gene-CCO47_RS18165;Name=CCO47_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18165;old_locus_tag=CCO47_18165 NZ_CP075113.1 Protein Homology CDS 3682550 3682774 . - 0 ID=cds-WP_000737127.1;Parent=gene-CCO47_RS18165;Dbxref=GenBank:WP_000737127.1;Name=WP_000737127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=CCO47_RS18165;product=membrane protein;protein_id=WP_000737127.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3682785 3683426 . - . ID=gene-CCO47_RS18170;Name=CCO47_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18170;old_locus_tag=CCO47_18170 NZ_CP075113.1 Protein Homology CDS 3682785 3683426 . - 0 ID=cds-WP_094912349.1;Parent=gene-CCO47_RS18170;Dbxref=GenBank:WP_094912349.1;Name=WP_094912349.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459342.1;locus_tag=CCO47_RS18170;product=helix-turn-helix transcriptional regulator;protein_id=WP_094912349.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3683570 3684094 . - . ID=gene-CCO47_RS18175;Name=CCO47_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18175;old_locus_tag=CCO47_18175 NZ_CP075113.1 Protein Homology CDS 3683570 3684094 . - 0 ID=cds-WP_000830237.1;Parent=gene-CCO47_RS18175;Dbxref=GenBank:WP_000830237.1;Name=WP_000830237.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459341.1;locus_tag=CCO47_RS18175;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_000830237.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3684494 3684982 . - . ID=gene-CCO47_RS18180;Name=CCO47_RS18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18180;old_locus_tag=CCO47_18180 NZ_CP075113.1 Protein Homology CDS 3684494 3684982 . - 0 ID=cds-WP_000545419.1;Parent=gene-CCO47_RS18180;Dbxref=GenBank:WP_000545419.1;Name=WP_000545419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459340.1;locus_tag=CCO47_RS18180;product=hypothetical protein;protein_id=WP_000545419.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3684955 3685698 . - . ID=gene-CCO47_RS18185;Name=CCO47_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18185;old_locus_tag=CCO47_18185 NZ_CP075113.1 Protein Homology CDS 3684955 3685698 . - 0 ID=cds-WP_000081368.1;Parent=gene-CCO47_RS18185;Dbxref=GenBank:WP_000081368.1;Name=WP_000081368.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=CCO47_RS18185;product=transcriptional regulator;protein_id=WP_000081368.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3685798 3687372 . - . ID=gene-CCO47_RS18190;Name=CCO47_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18190;old_locus_tag=CCO47_18190 NZ_CP075113.1 Protein Homology CDS 3685798 3687372 . - 0 ID=cds-WP_000868291.1;Parent=gene-CCO47_RS18190;Dbxref=GenBank:WP_000868291.1;Name=WP_000868291.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459338.1;locus_tag=CCO47_RS18190;product=EAL domain-containing protein;protein_id=WP_000868291.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3687874 3688174 . - . ID=gene-CCO47_RS18195;Name=CCO47_RS18195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS18195;old_locus_tag=CCO47_18195;pseudo=true NZ_CP075113.1 Protein Homology CDS 3687874 3688174 . - 0 ID=cds-CCO47_RS18195;Parent=gene-CCO47_RS18195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=CCO47_RS18195;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3688147 3688881 . - . ID=gene-CCO47_RS18200;Name=CCO47_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18200;old_locus_tag=CCO47_18200 NZ_CP075113.1 Protein Homology CDS 3688147 3688881 . - 0 ID=cds-WP_001005866.1;Parent=gene-CCO47_RS18200;Dbxref=GenBank:WP_001005866.1;Name=WP_001005866.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005860.1;locus_tag=CCO47_RS18200;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001005866.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3689545 3690081 . + . ID=gene-CCO47_RS18205;Name=CCO47_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18205;old_locus_tag=CCO47_18205 NZ_CP075113.1 Protein Homology CDS 3689545 3690081 . + 0 ID=cds-WP_000062036.1;Parent=gene-CCO47_RS18205;Dbxref=GenBank:WP_000062036.1;Name=WP_000062036.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459335.1;locus_tag=CCO47_RS18205;product=fimbrial protein;protein_id=WP_000062036.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3690143 3690904 . + . ID=gene-CCO47_RS18210;Name=stbB;gbkey=Gene;gene=stbB;gene_biotype=protein_coding;locus_tag=CCO47_RS18210;old_locus_tag=CCO47_18210 NZ_CP075113.1 Protein Homology CDS 3690143 3690904 . + 0 ID=cds-WP_000781492.1;Parent=gene-CCO47_RS18210;Dbxref=GenBank:WP_000781492.1;Name=WP_000781492.1;gbkey=CDS;gene=stbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459334.1;locus_tag=CCO47_RS18210;product=fimbrial biogenesis chaperone StbB;protein_id=WP_000781492.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3690888 3693449 . + . ID=gene-CCO47_RS18215;Name=CCO47_RS18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18215;old_locus_tag=CCO47_18215 NZ_CP075113.1 Protein Homology CDS 3690888 3693449 . + 0 ID=cds-WP_000075315.1;Parent=gene-CCO47_RS18215;Dbxref=GenBank:WP_000075315.1;Name=WP_000075315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459333.1;locus_tag=CCO47_RS18215;product=fimbrial outer membrane usher protein;protein_id=WP_000075315.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3693454 3694779 . + . ID=gene-CCO47_RS18220;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=CCO47_RS18220;old_locus_tag=CCO47_18220 NZ_CP075113.1 Protein Homology CDS 3693454 3694779 . + 0 ID=cds-WP_000899103.1;Parent=gene-CCO47_RS18220;Dbxref=GenBank:WP_000899103.1;Name=WP_000899103.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=CCO47_RS18220;product=fimbrial usher protein StbD;protein_id=WP_000899103.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3694745 3695503 . + . ID=gene-CCO47_RS18225;Name=stbE;gbkey=Gene;gene=stbE;gene_biotype=protein_coding;locus_tag=CCO47_RS18225;old_locus_tag=CCO47_18225 NZ_CP075113.1 Protein Homology CDS 3694745 3695503 . + 0 ID=cds-WP_001247029.1;Parent=gene-CCO47_RS18225;Dbxref=GenBank:WP_001247029.1;Name=WP_001247029.1;gbkey=CDS;gene=stbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459331.1;locus_tag=CCO47_RS18225;product=fimbrial biogenesis chaperone StbE;protein_id=WP_001247029.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3695551 3695949 . - . ID=gene-CCO47_RS18230;Name=CCO47_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18230;old_locus_tag=CCO47_18230 NZ_CP075113.1 Protein Homology CDS 3695551 3695949 . - 0 ID=cds-WP_000766848.1;Parent=gene-CCO47_RS18230;Dbxref=GenBank:WP_000766848.1;Name=WP_000766848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459330.1;locus_tag=CCO47_RS18230;product=hypothetical protein;protein_id=WP_000766848.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3696640 3696912 . + . ID=gene-CCO47_RS18235;Name=CCO47_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18235;old_locus_tag=CCO47_18235 NZ_CP075113.1 Protein Homology CDS 3696640 3696912 . + 0 ID=cds-WP_001675688.1;Parent=gene-CCO47_RS18235;Dbxref=GenBank:WP_001675688.1;Name=WP_001675688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459329.1;locus_tag=CCO47_RS18235;product=hypothetical protein;protein_id=WP_001675688.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3696857 3697822 . - . ID=gene-CCO47_RS18240;Name=CCO47_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18240;old_locus_tag=CCO47_18240 NZ_CP075113.1 Protein Homology CDS 3696857 3697822 . - 0 ID=cds-WP_000859022.1;Parent=gene-CCO47_RS18240;Dbxref=GenBank:WP_000859022.1;Name=WP_000859022.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459328.1;locus_tag=CCO47_RS18240;product=LysR family transcriptional regulator;protein_id=WP_000859022.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3697856 3698770 . - . ID=gene-CCO47_RS18245;Name=CCO47_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18245;old_locus_tag=CCO47_18245 NZ_CP075113.1 Protein Homology CDS 3697856 3698770 . - 0 ID=cds-WP_000105592.1;Parent=gene-CCO47_RS18245;Dbxref=GenBank:WP_000105592.1;Name=WP_000105592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459327.1;locus_tag=CCO47_RS18245;product=alpha/beta fold hydrolase;protein_id=WP_000105592.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3698770 3699648 . - . ID=gene-CCO47_RS18250;Name=CCO47_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18250;old_locus_tag=CCO47_18250 NZ_CP075113.1 Protein Homology CDS 3698770 3699648 . - 0 ID=cds-WP_094912347.1;Parent=gene-CCO47_RS18250;Dbxref=GenBank:WP_094912347.1;Name=WP_094912347.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459326.1;locus_tag=CCO47_RS18250;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_094912347.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3699663 3700289 . - . ID=gene-CCO47_RS18255;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=CCO47_RS18255;old_locus_tag=CCO47_18255 NZ_CP075113.1 Protein Homology CDS 3699663 3700289 . - 0 ID=cds-WP_000379339.1;Parent=gene-CCO47_RS18255;Dbxref=GenBank:WP_000379339.1;Name=WP_000379339.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459325.1;locus_tag=CCO47_RS18255;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000379339.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3700291 3701712 . - . ID=gene-CCO47_RS18260;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=CCO47_RS18260;old_locus_tag=CCO47_18260 NZ_CP075113.1 Protein Homology CDS 3700291 3701712 . - 0 ID=cds-WP_001274863.1;Parent=gene-CCO47_RS18260;Dbxref=GenBank:WP_001274863.1;Name=WP_001274863.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459324.1;locus_tag=CCO47_RS18260;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001274863.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3701844 3703082 . - . ID=gene-CCO47_RS18265;Name=CCO47_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18265;old_locus_tag=CCO47_18265 NZ_CP075113.1 Protein Homology CDS 3701844 3703082 . - 0 ID=cds-WP_077906648.1;Parent=gene-CCO47_RS18265;Dbxref=GenBank:WP_077906648.1;Name=WP_077906648.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459323.3;locus_tag=CCO47_RS18265;product=MFS transporter;protein_id=WP_077906648.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3703424 3703747 . - . ID=gene-CCO47_RS18270;Name=CCO47_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18270;old_locus_tag=CCO47_18270 NZ_CP075113.1 Protein Homology CDS 3703424 3703747 . - 0 ID=cds-WP_001573898.1;Parent=gene-CCO47_RS18270;Dbxref=GenBank:WP_001573898.1;Name=WP_001573898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459322.1;locus_tag=CCO47_RS18270;product=DUF1889 family protein;protein_id=WP_001573898.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3703857 3703985 . - . ID=gene-CCO47_RS24485;Name=CCO47_RS24485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24485;old_locus_tag=CCO47_18275 NZ_CP075113.1 Protein Homology CDS 3703857 3703985 . - 0 ID=cds-WP_077221214.1;Parent=gene-CCO47_RS24485;Dbxref=GenBank:WP_077221214.1;Name=WP_077221214.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020417.7;locus_tag=CCO47_RS24485;product=diol dehydratase reactivase ATPase-like domain-containing protein;protein_id=WP_077221214.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3703933 3704298 . - . ID=gene-CCO47_RS18280;Name=CCO47_RS18280;end_range=3704298,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS18280;old_locus_tag=CCO47_18280;partial=true;pseudo=true;start_range=.,3703933 NZ_CP075113.1 Protein Homology CDS 3703933 3704298 . - 0 ID=cds-CCO47_RS18280;Parent=gene-CCO47_RS18280;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3704298,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228916.1;locus_tag=CCO47_RS18280;partial=true;product=diol dehydratase reactivase ATPase-like domain-containing protein;pseudo=true;start_range=.,3703933;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3704365 3705071 . + . ID=gene-CCO47_RS18285;Name=CCO47_RS18285;end_range=3705071,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS18285;old_locus_tag=CCO47_18285;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 3704365 3705071 . + 0 ID=cds-CCO47_RS18285;Parent=gene-CCO47_RS18285;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=3705071,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=CCO47_RS18285;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3705048 3705272 . - . ID=gene-CCO47_RS18290;Name=CCO47_RS18290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS18290;old_locus_tag=CCO47_18290;partial=true;pseudo=true;start_range=.,3705048 NZ_CP075113.1 Protein Homology CDS 3705048 3705272 . - 0 ID=cds-CCO47_RS18290;Parent=gene-CCO47_RS18290;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225313.1;locus_tag=CCO47_RS18290;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;start_range=.,3705048;transl_table=11 NZ_CP075113.1 RefSeq gene 3705436 3705511 . - . ID=gene-CCO47_RS18295;Name=CCO47_RS18295;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS18295;old_locus_tag=CCO47_18295 NZ_CP075113.1 tRNAscan-SE tRNA 3705436 3705511 . - . ID=rna-CCO47_RS18295;Parent=gene-CCO47_RS18295;anticodon=(pos:complement(3705476..3705478));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS18295;product=tRNA-Thr NZ_CP075113.1 tRNAscan-SE exon 3705436 3705511 . - . ID=exon-CCO47_RS18295-1;Parent=rna-CCO47_RS18295;anticodon=(pos:complement(3705476..3705478));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS18295;product=tRNA-Thr NZ_CP075113.1 RefSeq gene 3705627 3706874 . - . ID=gene-CCO47_RS18300;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=CCO47_RS18300;old_locus_tag=CCO47_18300 NZ_CP075113.1 Protein Homology CDS 3705627 3706874 . - 0 ID=cds-WP_000893239.1;Parent=gene-CCO47_RS18300;Dbxref=GenBank:WP_000893239.1;Name=WP_000893239.1;Ontology_term=GO:0055129,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459319.1;locus_tag=CCO47_RS18300;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_000893239.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3706886 3707989 . - . ID=gene-CCO47_RS18305;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=CCO47_RS18305;old_locus_tag=CCO47_18305 NZ_CP075113.1 Protein Homology CDS 3706886 3707989 . - 0 ID=cds-WP_001285275.1;Parent=gene-CCO47_RS18305;Dbxref=GenBank:WP_001285275.1;Name=WP_001285275.1;Ontology_term=GO:0055129,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459318.1;locus_tag=CCO47_RS18305;product=glutamate 5-kinase;protein_id=WP_001285275.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3708273 3709325 . + . ID=gene-CCO47_RS18310;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=CCO47_RS18310;old_locus_tag=CCO47_18310 NZ_CP075113.1 Protein Homology CDS 3708273 3709325 . + 0 ID=cds-WP_001043667.1;Parent=gene-CCO47_RS18310;Dbxref=GenBank:WP_001043667.1;Name=WP_001043667.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459317.1;locus_tag=CCO47_RS18310;product=phosphoporin PhoE;protein_id=WP_001043667.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3709376 3709777 . - . ID=gene-CCO47_RS18315;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=CCO47_RS18315;old_locus_tag=CCO47_18315 NZ_CP075113.1 Protein Homology CDS 3709376 3709777 . - 0 ID=cds-WP_000174693.1;Parent=gene-CCO47_RS18315;Dbxref=GenBank:WP_000174693.1;Name=WP_000174693.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459316.1;locus_tag=CCO47_RS18315;product=sigma factor-binding protein Crl;protein_id=WP_000174693.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3709835 3711079 . - . ID=gene-CCO47_RS18320;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=CCO47_RS18320;old_locus_tag=CCO47_18320 NZ_CP075113.1 Protein Homology CDS 3709835 3711079 . - 0 ID=cds-WP_000189582.1;Parent=gene-CCO47_RS18320;Dbxref=GenBank:WP_000189582.1;Name=WP_000189582.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459315.1;locus_tag=CCO47_RS18320;product=esterase FrsA;protein_id=WP_000189582.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3711168 3711626 . - . ID=gene-CCO47_RS18325;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=CCO47_RS18325;old_locus_tag=CCO47_18325 NZ_CP075113.1 Protein Homology CDS 3711168 3711626 . - 0 ID=cds-WP_001292018.1;Parent=gene-CCO47_RS18325;Dbxref=GenBank:WP_001292018.1;Name=WP_001292018.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=CCO47_RS18325;product=xanthine phosphoribosyltransferase;protein_id=WP_001292018.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3711875 3713332 . + . ID=gene-CCO47_RS18330;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=CCO47_RS18330;old_locus_tag=CCO47_18330 NZ_CP075113.1 Protein Homology CDS 3711875 3713332 . + 0 ID=cds-WP_001292977.1;Parent=gene-CCO47_RS18330;Dbxref=GenBank:WP_001292977.1;Name=WP_001292977.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=CCO47_RS18330;product=cytosol nonspecific dipeptidase;protein_id=WP_001292977.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3713487 3714101 . - . ID=gene-CCO47_RS18335;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=CCO47_RS18335;old_locus_tag=CCO47_18335 NZ_CP075113.1 Protein Homology CDS 3713487 3714101 . - 0 ID=cds-WP_000602086.1;Parent=gene-CCO47_RS18335;Dbxref=GenBank:WP_000602086.1;Name=WP_000602086.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459312.1;locus_tag=CCO47_RS18335;product=peptide chain release factor H;protein_id=WP_000602086.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3714098 3715237 . - . ID=gene-CCO47_RS18340;Name=CCO47_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18340;old_locus_tag=CCO47_18340 NZ_CP075113.1 Protein Homology CDS 3714098 3715237 . - 0 ID=cds-WP_000528879.1;Parent=gene-CCO47_RS18340;Dbxref=GenBank:WP_000528879.1;Name=WP_000528879.1;Ontology_term=GO:0006415;gbkey=CDS;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006895405.1;locus_tag=CCO47_RS18340;product=RNA ligase RtcB family protein;protein_id=WP_000528879.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3715456 3716511 . - . ID=gene-CCO47_RS18345;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=CCO47_RS18345;old_locus_tag=CCO47_18345 NZ_CP075113.1 Protein Homology CDS 3715456 3716511 . - 0 ID=cds-WP_001226204.1;Parent=gene-CCO47_RS18345;Dbxref=GenBank:WP_001226204.1;Name=WP_001226204.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459311.1;locus_tag=CCO47_RS18345;product=DNA polymerase IV;protein_id=WP_001226204.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3716761 3717501 . + . ID=gene-CCO47_RS18350;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=CCO47_RS18350;old_locus_tag=CCO47_18350 NZ_CP075113.1 Protein Homology CDS 3716761 3717501 . + 0 ID=cds-WP_001225658.1;Parent=gene-CCO47_RS18350;Dbxref=GenBank:WP_001225658.1;Name=WP_001225658.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459310.1;locus_tag=CCO47_RS18350;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_001225658.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3717472 3718239 . - . ID=gene-CCO47_RS18355;Name=CCO47_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18355;old_locus_tag=CCO47_18355 NZ_CP075113.1 Protein Homology CDS 3717472 3718239 . - 0 ID=cds-WP_000333387.1;Parent=gene-CCO47_RS18355;Dbxref=GenBank:WP_000333387.1;Name=WP_000333387.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459309.1;locus_tag=CCO47_RS18355;product=class II glutamine amidotransferase;protein_id=WP_000333387.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3718452 3719030 . - . ID=gene-CCO47_RS18360;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=CCO47_RS18360;old_locus_tag=CCO47_18360 NZ_CP075113.1 Protein Homology CDS 3718452 3719030 . - 0 ID=cds-WP_000284049.1;Parent=gene-CCO47_RS18360;Dbxref=GenBank:WP_000284049.1;Name=WP_000284049.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459308.1;locus_tag=CCO47_RS18360;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_000284049.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3719270 3721714 . + . ID=gene-CCO47_RS18365;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=CCO47_RS18365;old_locus_tag=CCO47_18365 NZ_CP075113.1 Protein Homology CDS 3719270 3721714 . + 0 ID=cds-WP_094912473.1;Parent=gene-CCO47_RS18365;Dbxref=GenBank:WP_094912473.1;Name=WP_094912473.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=CCO47_RS18365;product=acyl-CoA dehydrogenase FadE;protein_id=WP_094912473.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3721823 3722590 . + . ID=gene-CCO47_RS18370;Name=CCO47_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18370;old_locus_tag=CCO47_18370 NZ_CP075113.1 Protein Homology CDS 3721823 3722590 . + 0 ID=cds-WP_000015789.1;Parent=gene-CCO47_RS18370;Dbxref=GenBank:WP_000015789.1;Name=WP_000015789.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459306.1;locus_tag=CCO47_RS18370;product=amidohydrolase;protein_id=WP_000015789.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3722900 3723307 . + . ID=gene-CCO47_RS18375;Name=CCO47_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18375;old_locus_tag=CCO47_18375 NZ_CP075113.1 Protein Homology CDS 3722900 3723307 . + 0 ID=cds-WP_000788200.1;Parent=gene-CCO47_RS18375;Dbxref=GenBank:WP_000788200.1;Name=WP_000788200.1;Ontology_term=GO:0006457,GO:0044183,GO:0051082;gbkey=CDS;go_function=protein folding chaperone|0044183||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459305.1;locus_tag=CCO47_RS18375;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_000788200.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3723638 3724357 . + . ID=gene-CCO47_RS18380;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=CCO47_RS18380;old_locus_tag=CCO47_18380 NZ_CP075113.1 Protein Homology CDS 3723638 3724357 . + 0 ID=cds-WP_000787603.1;Parent=gene-CCO47_RS18380;Dbxref=GenBank:WP_000787603.1;Name=WP_000787603.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459304.1;locus_tag=CCO47_RS18380;product=adhesin/invasin protein PagN;protein_id=WP_000787603.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3724361 3724576 . - . ID=gene-CCO47_RS24280;Name=CCO47_RS24280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24280;pseudo=true NZ_CP075113.1 Protein Homology CDS 3724361 3724576 . - 0 ID=cds-CCO47_RS24280;Parent=gene-CCO47_RS24280;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=CCO47_RS24280;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3724696 3725643 . - . ID=gene-CCO47_RS18390;Name=CCO47_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18390;old_locus_tag=CCO47_18390 NZ_CP075113.1 Protein Homology CDS 3724696 3725643 . - 0 ID=cds-WP_000970300.1;Parent=gene-CCO47_RS18390;Dbxref=GenBank:WP_000970300.1;Name=WP_000970300.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=CCO47_RS18390;product=LysR family transcriptional regulator;protein_id=WP_000970300.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3726138 3726375 . - . ID=gene-CCO47_RS18395;Name=CCO47_RS18395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS18395;old_locus_tag=CCO47_18395;partial=true;pseudo=true;start_range=.,3726138 NZ_CP075113.1 Protein Homology CDS 3726138 3726375 . - 0 ID=cds-CCO47_RS18395;Parent=gene-CCO47_RS18395;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602066.1;locus_tag=CCO47_RS18395;partial=true;product=PerC family transcriptional regulator;pseudo=true;start_range=.,3726138;transl_table=11 NZ_CP075113.1 RefSeq gene 3726458 3727279 . - . ID=gene-CCO47_RS18400;Name=CCO47_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18400;old_locus_tag=CCO47_18400 NZ_CP075113.1 Protein Homology CDS 3726458 3727279 . - 0 ID=cds-WP_000119387.1;Parent=gene-CCO47_RS18400;Dbxref=GenBank:WP_000119387.1;Name=WP_000119387.1;Ontology_term=GO:0005975,GO:0016787,GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459301.1;locus_tag=CCO47_RS18400;product=polysaccharide deacetylase family protein;protein_id=WP_000119387.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3727687 3728157 . - . ID=gene-CCO47_RS18405;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=CCO47_RS18405;old_locus_tag=CCO47_18405 NZ_CP075113.1 Protein Homology CDS 3727687 3728157 . - 0 ID=cds-WP_000266946.1;Parent=gene-CCO47_RS18405;Dbxref=GenBank:WP_000266946.1;Name=WP_000266946.1;gbkey=CDS;gene=afaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000266935.1;locus_tag=CCO47_RS18405;product=AfaD family invasin;protein_id=WP_000266946.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3728179 3730689 . - . ID=gene-CCO47_RS18410;Name=CCO47_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18410;old_locus_tag=CCO47_18410 NZ_CP075113.1 Protein Homology CDS 3728179 3730689 . - 0 ID=cds-WP_000669624.1;Parent=gene-CCO47_RS18410;Dbxref=GenBank:WP_000669624.1;Name=WP_000669624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=CCO47_RS18410;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_000669624.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3730713 3731449 . - . ID=gene-CCO47_RS18415;Name=safB;gbkey=Gene;gene=safB;gene_biotype=pseudogene;locus_tag=CCO47_RS18415;old_locus_tag=CCO47_18415;pseudo=true NZ_CP075113.1 Protein Homology CDS 3730713 3731449 . - 0 ID=cds-CCO47_RS18415;Parent=gene-CCO47_RS18415;Note=frameshifted;gbkey=CDS;gene=safB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264198.1;locus_tag=CCO47_RS18415;product=pili assembly chaperone SafB;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3731533 3731985 . - . ID=gene-CCO47_RS18420;Name=CCO47_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18420;old_locus_tag=CCO47_18420 NZ_CP075113.1 Protein Homology CDS 3731533 3731985 . - 0 ID=cds-WP_001675682.1;Parent=gene-CCO47_RS18420;Dbxref=GenBank:WP_001675682.1;Name=WP_001675682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749863.1;locus_tag=CCO47_RS18420;product=Saf-pilin pilus formation protein SafA;protein_id=WP_001675682.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3732794 3733364 . - . ID=gene-CCO47_RS18425;Name=CCO47_RS18425;end_range=3733364,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS18425;old_locus_tag=CCO47_18425;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 3732794 3733364 . - 0 ID=cds-CCO47_RS18425;Parent=gene-CCO47_RS18425;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=3733364,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558178.1;locus_tag=CCO47_RS18425;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3733285 3733494 . - . ID=gene-CCO47_RS18430;Name=CCO47_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18430;old_locus_tag=CCO47_18430 NZ_CP075113.1 GeneMarkS-2+ CDS 3733285 3733494 . - 0 ID=cds-WP_001676010.1;Parent=gene-CCO47_RS18430;Dbxref=GenBank:WP_001676010.1;Name=WP_001676010.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO47_RS18430;product=helix-turn-helix domain-containing protein;protein_id=WP_001676010.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3733547 3733861 . + . ID=gene-CCO47_RS18435;Name=CCO47_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18435;old_locus_tag=CCO47_18435 NZ_CP075113.1 Protein Homology CDS 3733547 3733861 . + 0 ID=cds-WP_072100769.1;Parent=gene-CCO47_RS18435;Dbxref=GenBank:WP_072100769.1;Name=WP_072100769.1;Ontology_term=GO:0016070,GO:0003723,GO:0004521;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632802.1;locus_tag=CCO47_RS18435;product=SymE family type I addiction module toxin;protein_id=WP_072100769.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3733928 3734206 . - . ID=gene-CCO47_RS18440;Name=CCO47_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18440;old_locus_tag=CCO47_18440 NZ_CP075113.1 Protein Homology CDS 3733928 3734206 . - 0 ID=cds-WP_012543321.1;Parent=gene-CCO47_RS18440;Dbxref=GenBank:WP_012543321.1;Name=WP_012543321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459293.1;locus_tag=CCO47_RS18440;product=hypothetical protein;protein_id=WP_012543321.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3734337 3734492 . - . ID=gene-CCO47_RS24490;Name=CCO47_RS24490;end_range=3734492,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24490;partial=true;pseudo=true;start_range=.,3734337 NZ_CP075113.1 Protein Homology CDS 3734337 3734492 . - 0 ID=cds-CCO47_RS24490;Parent=gene-CCO47_RS24490;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3734492,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238642.1;locus_tag=CCO47_RS24490;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,3734337;transl_table=11 NZ_CP075113.1 RefSeq gene 3734522 3734989 . - . ID=gene-CCO47_RS18445;Name=CCO47_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18445;old_locus_tag=CCO47_18445 NZ_CP075113.1 Protein Homology CDS 3734522 3734989 . - 0 ID=cds-WP_000828183.1;Parent=gene-CCO47_RS18445;Dbxref=GenBank:WP_000828183.1;Name=WP_000828183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828176.1;locus_tag=CCO47_RS18445;product=sugar tyrosine-protein kinase;protein_id=WP_000828183.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3734986 3735303 . - . ID=gene-CCO47_RS18450;Name=CCO47_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18450;old_locus_tag=CCO47_18450 NZ_CP075113.1 Protein Homology CDS 3734986 3735303 . - 0 ID=cds-WP_176210647.1;Parent=gene-CCO47_RS18450;Dbxref=GenBank:WP_176210647.1;Name=WP_176210647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751277.1;locus_tag=CCO47_RS18450;product=hypothetical protein;protein_id=WP_176210647.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3735861 3736094 . - . ID=gene-CCO47_RS18455;Name=CCO47_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18455;old_locus_tag=CCO47_18455 NZ_CP075113.1 GeneMarkS-2+ CDS 3735861 3736094 . - 0 ID=cds-WP_124084119.1;Parent=gene-CCO47_RS18455;Dbxref=GenBank:WP_124084119.1;Name=WP_124084119.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO47_RS18455;product=hypothetical protein;protein_id=WP_124084119.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3736119 3736292 . - . ID=gene-CCO47_RS24495;Name=CCO47_RS24495;end_range=3736292,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24495;partial=true;pseudo=true;start_range=.,3736119 NZ_CP075113.1 Protein Homology CDS 3736119 3736292 . - 0 ID=cds-CCO47_RS24495;Parent=gene-CCO47_RS24495;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3736292,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=CCO47_RS24495;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,3736119;transl_table=11 NZ_CP075113.1 RefSeq gene 3736429 3736686 . + . ID=gene-CCO47_RS18460;Name=CCO47_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18460;old_locus_tag=CCO47_18460 NZ_CP075113.1 Protein Homology CDS 3736429 3736686 . + 0 ID=cds-WP_000994230.1;Parent=gene-CCO47_RS18460;Dbxref=GenBank:WP_000994230.1;Name=WP_000994230.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994230.1;locus_tag=CCO47_RS18460;product=SymE family type I addiction module toxin;protein_id=WP_000994230.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3736752 3737198 . - . ID=gene-CCO47_RS18465;Name=CCO47_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18465;old_locus_tag=CCO47_18465 NZ_CP075113.1 Protein Homology CDS 3736752 3737198 . - 0 ID=cds-WP_000171102.1;Parent=gene-CCO47_RS18465;Dbxref=GenBank:WP_000171102.1;Name=WP_000171102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171103.1;locus_tag=CCO47_RS18465;product=hypothetical protein;protein_id=WP_000171102.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3737195 3740017 . - . ID=gene-CCO47_RS18470;Name=CCO47_RS18470;end_range=3740017,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS18470;old_locus_tag=CCO47_18470;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 3737195 3740017 . - 0 ID=cds-CCO47_RS18470;Parent=gene-CCO47_RS18470;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3740017,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503219.1;locus_tag=CCO47_RS18470;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3740065 3740274 . + . ID=gene-CCO47_RS18475;Name=CCO47_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18475;old_locus_tag=CCO47_18475 NZ_CP075113.1 Protein Homology CDS 3740065 3740274 . + 0 ID=cds-WP_001675680.1;Parent=gene-CCO47_RS18475;Dbxref=GenBank:WP_001675680.1;Name=WP_001675680.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675680.1;locus_tag=CCO47_RS18475;product=SymE family type I addiction module toxin;protein_id=WP_001675680.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3740392 3740730 . - . ID=gene-CCO47_RS18480;Name=CCO47_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18480;old_locus_tag=CCO47_18480 NZ_CP075113.1 Protein Homology CDS 3740392 3740730 . - 0 ID=cds-WP_000201550.1;Parent=gene-CCO47_RS18480;Dbxref=GenBank:WP_000201550.1;Name=WP_000201550.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049362.2;locus_tag=CCO47_RS18480;product=DUF7716 domain-containing protein;protein_id=WP_000201550.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3740752 3741072 . - . ID=gene-CCO47_RS18485;Name=CCO47_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18485;old_locus_tag=CCO47_18485 NZ_CP075113.1 Protein Homology CDS 3740752 3741072 . - 0 ID=cds-WP_016695071.1;Parent=gene-CCO47_RS18485;Dbxref=GenBank:WP_016695071.1;Name=WP_016695071.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024053.7;locus_tag=CCO47_RS18485;product=HNH endonuclease;protein_id=WP_016695071.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3741046 3741443 . - . ID=gene-CCO47_RS24285;Name=CCO47_RS24285;end_range=3741443,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24285;partial=true;pseudo=true;start_range=.,3741046 NZ_CP075113.1 Protein Homology CDS 3741046 3741443 . - 0 ID=cds-CCO47_RS24285;Parent=gene-CCO47_RS24285;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3741443,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=CCO47_RS24285;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,3741046;transl_table=11 NZ_CP075113.1 RefSeq gene 3741529 3741966 . - . ID=gene-CCO47_RS18495;Name=CCO47_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18495;old_locus_tag=CCO47_18495 NZ_CP075113.1 Protein Homology CDS 3741529 3741966 . - 0 ID=cds-WP_000870136.1;Parent=gene-CCO47_RS18495;Dbxref=GenBank:WP_000870136.1;Name=WP_000870136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000870136.1;locus_tag=CCO47_RS18495;product=hypothetical protein;protein_id=WP_000870136.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3741966 3742307 . - . ID=gene-CCO47_RS18500;Name=CCO47_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18500;old_locus_tag=CCO47_18500 NZ_CP075113.1 GeneMarkS-2+ CDS 3741966 3742307 . - 0 ID=cds-WP_001751274.1;Parent=gene-CCO47_RS18500;Dbxref=GenBank:WP_001751274.1;Name=WP_001751274.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO47_RS18500;product=hypothetical protein;protein_id=WP_001751274.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3742291 3746042 . - . ID=gene-CCO47_RS18505;Name=CCO47_RS18505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS18505;old_locus_tag=CCO47_18505;partial=true;pseudo=true;start_range=.,3742291 NZ_CP075113.1 Protein Homology CDS 3742291 3746042 . - 0 ID=cds-CCO47_RS18505;Parent=gene-CCO47_RS18505;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=CCO47_RS18505;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,3742291;transl_table=11 NZ_CP075113.1 RefSeq gene 3746061 3746507 . - . ID=gene-CCO47_RS18510;Name=CCO47_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18510;old_locus_tag=CCO47_18510 NZ_CP075113.1 Protein Homology CDS 3746061 3746507 . - 0 ID=cds-WP_000375834.1;Parent=gene-CCO47_RS18510;Dbxref=GenBank:WP_000375834.1;Name=WP_000375834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459288.1;locus_tag=CCO47_RS18510;product=DcrB-related protein;protein_id=WP_000375834.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3746531 3748720 . - . ID=gene-CCO47_RS18515;Name=CCO47_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18515;old_locus_tag=CCO47_18515 NZ_CP075113.1 Protein Homology CDS 3746531 3748720 . - 0 ID=cds-WP_000011530.1;Parent=gene-CCO47_RS18515;Dbxref=GenBank:WP_000011530.1;Name=WP_000011530.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459287.1;locus_tag=CCO47_RS18515;product=type VI secretion system Vgr family protein;protein_id=WP_000011530.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3749117 3749638 . - . ID=gene-CCO47_RS18520;Name=CCO47_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18520;old_locus_tag=CCO47_18520 NZ_CP075113.1 Protein Homology CDS 3749117 3749638 . - 0 ID=cds-WP_000968384.1;Parent=gene-CCO47_RS18520;Dbxref=GenBank:WP_000968384.1;Name=WP_000968384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459286.1;locus_tag=CCO47_RS18520;product=DUF2778 domain-containing protein;protein_id=WP_000968384.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3749662 3750078 . - . ID=gene-CCO47_RS18525;Name=CCO47_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18525;old_locus_tag=CCO47_18525 NZ_CP075113.1 Protein Homology CDS 3749662 3750078 . - 0 ID=cds-WP_000759642.1;Parent=gene-CCO47_RS18525;Dbxref=GenBank:WP_000759642.1;Name=WP_000759642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459285.1;locus_tag=CCO47_RS18525;product=DUF2195 family protein;protein_id=WP_000759642.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3750075 3750863 . - . ID=gene-CCO47_RS18530;Name=CCO47_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18530;old_locus_tag=CCO47_18530 NZ_CP075113.1 Protein Homology CDS 3750075 3750863 . - 0 ID=cds-WP_001254128.1;Parent=gene-CCO47_RS18530;Dbxref=GenBank:WP_001254128.1;Name=WP_001254128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459284.1;locus_tag=CCO47_RS18530;product=TagF domain-containing protein;protein_id=WP_001254128.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3750863 3754732 . - . ID=gene-CCO47_RS18535;Name=icmF;gbkey=Gene;gene=icmF;gene_biotype=protein_coding;locus_tag=CCO47_RS18535;old_locus_tag=CCO47_18535 NZ_CP075113.1 Protein Homology CDS 3750863 3754732 . - 0 ID=cds-WP_001168967.1;Parent=gene-CCO47_RS18535;Dbxref=GenBank:WP_001168967.1;Name=WP_001168967.1;gbkey=CDS;gene=icmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=CCO47_RS18535;product=type VI secretion protein IcmF;protein_id=WP_001168967.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3754766 3755197 . - . ID=gene-CCO47_RS18540;Name=sciR;gbkey=Gene;gene=sciR;gene_biotype=protein_coding;locus_tag=CCO47_RS18540;old_locus_tag=CCO47_18540 NZ_CP075113.1 Protein Homology CDS 3754766 3755197 . - 0 ID=cds-WP_077906638.1;Parent=gene-CCO47_RS18540;Dbxref=GenBank:WP_077906638.1;Name=WP_077906638.1;gbkey=CDS;gene=sciR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459282.1;locus_tag=CCO47_RS18540;product=Shiga-like toxin A subunit SciR;protein_id=WP_077906638.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3755400 3756173 . - . ID=gene-CCO47_RS18545;Name=CCO47_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18545;old_locus_tag=CCO47_18545 NZ_CP075113.1 Protein Homology CDS 3755400 3756173 . - 0 ID=cds-WP_000976555.1;Parent=gene-CCO47_RS18545;Dbxref=GenBank:WP_000976555.1;Name=WP_000976555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459281.1;locus_tag=CCO47_RS18545;product=Rap1a/Tai family immunity protein;protein_id=WP_000976555.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3756178 3757482 . - . ID=gene-CCO47_RS18550;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=CCO47_RS18550;old_locus_tag=CCO47_18550 NZ_CP075113.1 Protein Homology CDS 3756178 3757482 . - 0 ID=cds-WP_000132486.1;Parent=gene-CCO47_RS18550;Dbxref=GenBank:WP_000132486.1;Name=WP_000132486.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssL;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459280.1;locus_tag=CCO47_RS18550;product=type VI secretion system protein TssL%2C long form;protein_id=WP_000132486.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3757479 3758822 . - . ID=gene-CCO47_RS18555;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=CCO47_RS18555;old_locus_tag=CCO47_18555 NZ_CP075113.1 Protein Homology CDS 3757479 3758822 . - 0 ID=cds-WP_000118732.1;Parent=gene-CCO47_RS18555;Dbxref=GenBank:WP_000118732.1;Name=WP_000118732.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459279.1;locus_tag=CCO47_RS18555;product=type VI secretion system baseplate subunit TssK;protein_id=WP_000118732.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3758826 3759362 . - . ID=gene-CCO47_RS18560;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=CCO47_RS18560;old_locus_tag=CCO47_18560 NZ_CP075113.1 Protein Homology CDS 3758826 3759362 . - 0 ID=cds-WP_001007103.1;Parent=gene-CCO47_RS18560;Dbxref=GenBank:WP_001007103.1;Name=WP_001007103.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=CCO47_RS18560;product=type VI secretion system lipoprotein TssJ;protein_id=WP_001007103.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3759429 3759914 . - . ID=gene-CCO47_RS18565;Name=CCO47_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18565;old_locus_tag=CCO47_18565 NZ_CP075113.1 Protein Homology CDS 3759429 3759914 . - 0 ID=cds-WP_000312792.1;Parent=gene-CCO47_RS18565;Dbxref=GenBank:WP_000312792.1;Name=WP_000312792.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=CCO47_RS18565;product=Hcp family type VI secretion system effector;protein_id=WP_000312792.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3760166 3760612 . - . ID=gene-CCO47_RS18570;Name=CCO47_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18570;old_locus_tag=CCO47_18570 NZ_CP075113.1 Protein Homology CDS 3760166 3760612 . - 0 ID=cds-WP_001573854.1;Parent=gene-CCO47_RS18570;Dbxref=GenBank:WP_001573854.1;Name=WP_001573854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535435.1;locus_tag=CCO47_RS18570;product=STY0301 family protein;protein_id=WP_001573854.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3760625 3761011 . - . ID=gene-CCO47_RS18575;Name=CCO47_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18575;old_locus_tag=CCO47_18575 NZ_CP075113.1 Protein Homology CDS 3760625 3761011 . - 0 ID=cds-WP_000323514.1;Parent=gene-CCO47_RS18575;Dbxref=GenBank:WP_000323514.1;Name=WP_000323514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000323515.1;locus_tag=CCO47_RS18575;product=BPSL0067 family protein;protein_id=WP_000323514.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3761078 3762586 . - . ID=gene-CCO47_RS18580;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=CCO47_RS18580;old_locus_tag=CCO47_18580 NZ_CP075113.1 Protein Homology CDS 3761078 3762586 . - 0 ID=cds-WP_000013881.1;Parent=gene-CCO47_RS18580;Dbxref=GenBank:WP_000013881.1;Name=WP_000013881.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459271.1;locus_tag=CCO47_RS18580;product=type VI secretion system contractile sheath large subunit;protein_id=WP_000013881.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3762610 3763152 . - . ID=gene-CCO47_RS18585;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=CCO47_RS18585;old_locus_tag=CCO47_18585 NZ_CP075113.1 Protein Homology CDS 3762610 3763152 . - 0 ID=cds-WP_000996817.1;Parent=gene-CCO47_RS18585;Dbxref=GenBank:WP_000996817.1;Name=WP_000996817.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459270.1;locus_tag=CCO47_RS18585;product=type VI secretion system contractile sheath small subunit;protein_id=WP_000996817.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3763252 3765891 . - . ID=gene-CCO47_RS18590;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=CCO47_RS18590;old_locus_tag=CCO47_18590 NZ_CP075113.1 Protein Homology CDS 3763252 3765891 . - 0 ID=cds-WP_000449784.1;Parent=gene-CCO47_RS18590;Dbxref=GenBank:WP_000449784.1;Name=WP_000449784.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459269.1;locus_tag=CCO47_RS18590;product=type VI secretion system ATPase TssH;protein_id=WP_000449784.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3766259 3767161 . + . ID=gene-CCO47_RS18595;Name=tagK;gbkey=Gene;gene=tagK;gene_biotype=protein_coding;locus_tag=CCO47_RS18595;old_locus_tag=CCO47_18595 NZ_CP075113.1 Protein Homology CDS 3766259 3767161 . + 0 ID=cds-WP_000806684.1;Parent=gene-CCO47_RS18595;Dbxref=GenBank:WP_000806684.1;Name=WP_000806684.1;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459268.1;locus_tag=CCO47_RS18595;product=type VI secretion system-associated protein TagK;protein_id=WP_000806684.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3767148 3767972 . + . ID=gene-CCO47_RS18600;Name=CCO47_RS18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18600;old_locus_tag=CCO47_18600 NZ_CP075113.1 Protein Homology CDS 3767148 3767972 . + 0 ID=cds-WP_000750548.1;Parent=gene-CCO47_RS18600;Dbxref=GenBank:WP_000750548.1;Name=WP_000750548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459267.1;locus_tag=CCO47_RS18600;product=type VI secretion system accessory protein TagJ;protein_id=WP_000750548.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3767969 3768463 . + . ID=gene-CCO47_RS18605;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=CCO47_RS18605;old_locus_tag=CCO47_18605 NZ_CP075113.1 Protein Homology CDS 3767969 3768463 . + 0 ID=cds-WP_000108007.1;Parent=gene-CCO47_RS18605;Dbxref=GenBank:WP_000108007.1;Name=WP_000108007.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459266.1;locus_tag=CCO47_RS18605;product=type VI secretion system baseplate subunit TssE;protein_id=WP_000108007.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3768479 3770316 . + . ID=gene-CCO47_RS18610;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=pseudogene;locus_tag=CCO47_RS18610;old_locus_tag=CCO47_18610;pseudo=true NZ_CP075113.1 Protein Homology CDS 3768479 3770316 . + 0 ID=cds-CCO47_RS18610;Parent=gene-CCO47_RS18610;Note=frameshifted;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459265.1;locus_tag=CCO47_RS18610;product=type VI secretion system baseplate subunit TssF;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3770313 3771308 . + . ID=gene-CCO47_RS18615;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=CCO47_RS18615;old_locus_tag=CCO47_18615 NZ_CP075113.1 Protein Homology CDS 3770313 3771308 . + 0 ID=cds-WP_000145239.1;Parent=gene-CCO47_RS18615;Dbxref=GenBank:WP_000145239.1;Name=WP_000145239.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459264.1;locus_tag=CCO47_RS18615;product=type VI secretion system baseplate subunit TssG;protein_id=WP_000145239.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3771319 3772374 . + . ID=gene-CCO47_RS18620;Name=CCO47_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18620;old_locus_tag=CCO47_18620 NZ_CP075113.1 Protein Homology CDS 3771319 3772374 . + 0 ID=cds-WP_000367626.1;Parent=gene-CCO47_RS18620;Dbxref=GenBank:WP_000367626.1;Name=WP_000367626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459263.1;locus_tag=CCO47_RS18620;product=type VI secretion system protein TssA;protein_id=WP_000367626.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3772696 3772772 . - . ID=gene-CCO47_RS18625;Name=CCO47_RS18625;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS18625;old_locus_tag=CCO47_18625 NZ_CP075113.1 tRNAscan-SE tRNA 3772696 3772772 . - . ID=rna-CCO47_RS18625;Parent=gene-CCO47_RS18625;anticodon=(pos:complement(3772736..3772738));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS18625;product=tRNA-Asp NZ_CP075113.1 tRNAscan-SE exon 3772696 3772772 . - . ID=exon-CCO47_RS18625-1;Parent=rna-CCO47_RS18625;anticodon=(pos:complement(3772736..3772738));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS18625;product=tRNA-Asp NZ_CP075113.1 RefSeq gene 3772906 3773637 . - . ID=gene-CCO47_RS18630;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=CCO47_RS18630;old_locus_tag=CCO47_18630 NZ_CP075113.1 Protein Homology CDS 3772906 3773637 . - 0 ID=cds-WP_001670675.1;Parent=gene-CCO47_RS18630;Dbxref=GenBank:WP_001670675.1;Name=WP_001670675.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459262.1;locus_tag=CCO47_RS18630;product=DNA polymerase III subunit epsilon;protein_id=WP_001670675.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3773701 3774168 . + . ID=gene-CCO47_RS18635;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=CCO47_RS18635;old_locus_tag=CCO47_18635 NZ_CP075113.1 Protein Homology CDS 3773701 3774168 . + 0 ID=cds-WP_000917872.1;Parent=gene-CCO47_RS18635;Dbxref=GenBank:WP_000917872.1;Name=WP_000917872.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459261.1;locus_tag=CCO47_RS18635;product=ribonuclease HI;protein_id=WP_000917872.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3774165 3774887 . - . ID=gene-CCO47_RS18640;Name=CCO47_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18640;old_locus_tag=CCO47_18640 NZ_CP075113.1 Protein Homology CDS 3774165 3774887 . - 0 ID=cds-WP_000801230.1;Parent=gene-CCO47_RS18640;Dbxref=GenBank:WP_000801230.1;Name=WP_000801230.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459260.1;locus_tag=CCO47_RS18640;product=class I SAM-dependent methyltransferase;protein_id=WP_000801230.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3774922 3775677 . + . ID=gene-CCO47_RS18645;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=CCO47_RS18645;old_locus_tag=CCO47_18645 NZ_CP075113.1 Protein Homology CDS 3774922 3775677 . + 0 ID=cds-WP_001052774.1;Parent=gene-CCO47_RS18645;Dbxref=GenBank:WP_001052774.1;Name=WP_001052774.1;Ontology_term=GO:0051596,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459259.1;locus_tag=CCO47_RS18645;product=hydroxyacylglutathione hydrolase;protein_id=WP_001052774.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3775749 3777116 . + . ID=gene-CCO47_RS18650;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=CCO47_RS18650;old_locus_tag=CCO47_18650 NZ_CP075113.1 Protein Homology CDS 3775749 3777116 . + 0 ID=cds-WP_000644706.1;Parent=gene-CCO47_RS18650;Dbxref=GenBank:WP_000644706.1;Name=WP_000644706.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=CCO47_RS18650;product=murein transglycosylase D;protein_id=WP_000644706.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3777172 3777942 . - . ID=gene-CCO47_RS18655;Name=CCO47_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18655;old_locus_tag=CCO47_18655 NZ_CP075113.1 Protein Homology CDS 3777172 3777942 . - 0 ID=cds-WP_000207238.1;Parent=gene-CCO47_RS18655;Dbxref=GenBank:WP_000207238.1;Name=WP_000207238.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459257.1;locus_tag=CCO47_RS18655;product=class I SAM-dependent methyltransferase;protein_id=WP_000207238.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3778020 3778820 . - . ID=gene-CCO47_RS18660;Name=CCO47_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18660;old_locus_tag=CCO47_18660 NZ_CP075113.1 Protein Homology CDS 3778020 3778820 . - 0 ID=cds-WP_001230986.1;Parent=gene-CCO47_RS18660;Dbxref=GenBank:WP_001230986.1;Name=WP_001230986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=CCO47_RS18660;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001230986.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3778952 3780127 . - . ID=gene-CCO47_RS18665;Name=CCO47_RS18665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18665;old_locus_tag=CCO47_18665 NZ_CP075113.1 Protein Homology CDS 3778952 3780127 . - 0 ID=cds-WP_001127532.1;Parent=gene-CCO47_RS18665;Dbxref=GenBank:WP_001127532.1;Name=WP_001127532.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=CCO47_RS18665;product=MFS transporter;protein_id=WP_001127532.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3780232 3781146 . + . ID=gene-CCO47_RS18670;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=CCO47_RS18670;old_locus_tag=CCO47_18670 NZ_CP075113.1 Protein Homology CDS 3780232 3781146 . + 0 ID=cds-WP_000648524.1;Parent=gene-CCO47_RS18670;Dbxref=GenBank:WP_000648524.1;Name=WP_000648524.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459254.1;locus_tag=CCO47_RS18670;product=DNA-binding transcriptional regulator YafC;protein_id=WP_000648524.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3781167 3781970 . - . ID=gene-CCO47_RS18675;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=CCO47_RS18675;old_locus_tag=CCO47_18675 NZ_CP075113.1 Protein Homology CDS 3781167 3781970 . - 0 ID=cds-WP_000154867.1;Parent=gene-CCO47_RS18675;Dbxref=GenBank:WP_000154867.1;Name=WP_000154867.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=CCO47_RS18675;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_000154867.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3782135 3782211 . - . ID=gene-CCO47_RS18680;Name=CCO47_RS18680;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS18680;old_locus_tag=CCO47_18680 NZ_CP075113.1 tRNAscan-SE tRNA 3782135 3782211 . - . ID=rna-CCO47_RS18680;Parent=gene-CCO47_RS18680;anticodon=(pos:complement(3782175..3782177));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS18680;product=tRNA-Asp NZ_CP075113.1 tRNAscan-SE exon 3782135 3782211 . - . ID=exon-CCO47_RS18680-1;Parent=rna-CCO47_RS18680;anticodon=(pos:complement(3782175..3782177));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS18680;product=tRNA-Asp NZ_CP075113.1 RefSeq gene 3782403 3782518 . - . ID=gene-CCO47_RS18685;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO47_RS18685;old_locus_tag=CCO47_18685 NZ_CP075113.1 cmsearch rRNA 3782403 3782518 . - . ID=rna-CCO47_RS18685;Parent=gene-CCO47_RS18685;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS18685;product=5S ribosomal RNA NZ_CP075113.1 cmsearch exon 3782403 3782518 . - . ID=exon-CCO47_RS18685-1;Parent=rna-CCO47_RS18685;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS18685;product=5S ribosomal RNA NZ_CP075113.1 RefSeq gene 3782716 3785803 . - . ID=gene-CCO47_RS18690;Name=CCO47_RS18690;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO47_RS18690;old_locus_tag=CCO47_18690 NZ_CP075113.1 cmsearch rRNA 3782716 3785803 . - . ID=rna-CCO47_RS18690;Parent=gene-CCO47_RS18690;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS18690;product=23S ribosomal RNA NZ_CP075113.1 cmsearch exon 3782716 3785803 . - . ID=exon-CCO47_RS18690-1;Parent=rna-CCO47_RS18690;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS18690;product=23S ribosomal RNA NZ_CP075113.1 RefSeq gene 3785986 3786061 . - . ID=gene-CCO47_RS18695;Name=CCO47_RS18695;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS18695;old_locus_tag=CCO47_18695 NZ_CP075113.1 tRNAscan-SE tRNA 3785986 3786061 . - . ID=rna-CCO47_RS18695;Parent=gene-CCO47_RS18695;anticodon=(pos:complement(3786026..3786028));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS18695;product=tRNA-Ala NZ_CP075113.1 tRNAscan-SE exon 3785986 3786061 . - . ID=exon-CCO47_RS18695-1;Parent=rna-CCO47_RS18695;anticodon=(pos:complement(3786026..3786028));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS18695;product=tRNA-Ala NZ_CP075113.1 RefSeq gene 3786173 3786249 . - . ID=gene-CCO47_RS18700;Name=CCO47_RS18700;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS18700;old_locus_tag=CCO47_18700 NZ_CP075113.1 tRNAscan-SE tRNA 3786173 3786249 . - . ID=rna-CCO47_RS18700;Parent=gene-CCO47_RS18700;anticodon=(pos:complement(3786213..3786215));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS18700;product=tRNA-Ile NZ_CP075113.1 tRNAscan-SE exon 3786173 3786249 . - . ID=exon-CCO47_RS18700-1;Parent=rna-CCO47_RS18700;anticodon=(pos:complement(3786213..3786215));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS18700;product=tRNA-Ile NZ_CP075113.1 RefSeq gene 3786319 3787860 . - . ID=gene-CCO47_RS18705;Name=CCO47_RS18705;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO47_RS18705;old_locus_tag=CCO47_18705 NZ_CP075113.1 cmsearch rRNA 3786319 3787860 . - . ID=rna-CCO47_RS18705;Parent=gene-CCO47_RS18705;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS18705;product=16S ribosomal RNA NZ_CP075113.1 cmsearch exon 3786319 3787860 . - . ID=exon-CCO47_RS18705-1;Parent=rna-CCO47_RS18705;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS18705;product=16S ribosomal RNA NZ_CP075113.1 RefSeq gene 3788231 3788797 . - . ID=gene-CCO47_RS18710;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=CCO47_RS18710;old_locus_tag=CCO47_18710 NZ_CP075113.1 Protein Homology CDS 3788231 3788797 . - 0 ID=cds-WP_001051726.1;Parent=gene-CCO47_RS18710;Dbxref=GenBank:WP_001051726.1;Name=WP_001051726.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459252.1;locus_tag=CCO47_RS18710;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_001051726.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3788987 3790018 . + . ID=gene-CCO47_RS18715;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=CCO47_RS18715;old_locus_tag=CCO47_18715 NZ_CP075113.1 Protein Homology CDS 3788987 3790018 . + 0 ID=cds-WP_000594021.1;Parent=gene-CCO47_RS18715;Dbxref=GenBank:WP_000594021.1;Name=WP_000594021.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=CCO47_RS18715;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_000594021.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3790011 3790664 . + . ID=gene-CCO47_RS18720;Name=CCO47_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18720;old_locus_tag=CCO47_18720 NZ_CP075113.1 Protein Homology CDS 3790011 3790664 . + 0 ID=cds-WP_001287486.1;Parent=gene-CCO47_RS18720;Dbxref=GenBank:WP_001287486.1;Name=WP_001287486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=CCO47_RS18720;product=methionine ABC transporter permease MetI;protein_id=WP_001287486.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3790703 3791518 . + . ID=gene-CCO47_RS18725;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=CCO47_RS18725;old_locus_tag=CCO47_18725 NZ_CP075113.1 Protein Homology CDS 3790703 3791518 . + 0 ID=cds-WP_000874215.1;Parent=gene-CCO47_RS18725;Dbxref=GenBank:WP_000874215.1;Name=WP_000874215.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=CCO47_RS18725;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_000874215.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3791637 3792041 . + . ID=gene-CCO47_RS18730;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=CCO47_RS18730;old_locus_tag=CCO47_18730 NZ_CP075113.1 Protein Homology CDS 3791637 3792041 . + 0 ID=cds-WP_001202315.1;Parent=gene-CCO47_RS18730;Dbxref=GenBank:WP_001202315.1;Name=WP_001202315.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=CCO47_RS18730;product=Rcs stress response system protein RcsF;protein_id=WP_001202315.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3792038 3792745 . + . ID=gene-CCO47_RS18735;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=CCO47_RS18735;old_locus_tag=CCO47_18735 NZ_CP075113.1 Protein Homology CDS 3792038 3792745 . + 0 ID=cds-WP_000093988.1;Parent=gene-CCO47_RS18735;Dbxref=GenBank:WP_000093988.1;Name=WP_000093988.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459247.1;locus_tag=CCO47_RS18735;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_000093988.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3792856 3794574 . + . ID=gene-CCO47_RS18740;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=CCO47_RS18740;old_locus_tag=CCO47_18740 NZ_CP075113.1 Protein Homology CDS 3792856 3794574 . + 0 ID=cds-WP_001260683.1;Parent=gene-CCO47_RS18740;Dbxref=GenBank:WP_001260683.1;Name=WP_001260683.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=CCO47_RS18740;product=proline--tRNA ligase;protein_id=WP_001260683.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3794648 3795349 . - . ID=gene-CCO47_RS18745;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=CCO47_RS18745;old_locus_tag=CCO47_18745 NZ_CP075113.1 Protein Homology CDS 3794648 3795349 . - 0 ID=cds-WP_000252579.1;Parent=gene-CCO47_RS18745;Dbxref=GenBank:WP_000252579.1;Name=WP_000252579.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006899150.1;locus_tag=CCO47_RS18745;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_000252579.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3795381 3795803 . - . ID=gene-CCO47_RS18750;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=CCO47_RS18750;old_locus_tag=CCO47_18750 NZ_CP075113.1 Protein Homology CDS 3795381 3795803 . - 0 ID=cds-WP_000560527.1;Parent=gene-CCO47_RS18750;Dbxref=GenBank:WP_000560527.1;Name=WP_000560527.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459245.1;locus_tag=CCO47_RS18750;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_000560527.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3795800 3796345 . - . ID=gene-CCO47_RS18755;Name=CCO47_RS18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18755;old_locus_tag=CCO47_18755 NZ_CP075113.1 Protein Homology CDS 3795800 3796345 . - 0 ID=cds-WP_001185319.1;Parent=gene-CCO47_RS18755;Dbxref=GenBank:WP_001185319.1;Name=WP_001185319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459244.1;locus_tag=CCO47_RS18755;product=YaeQ family protein;protein_id=WP_001185319.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3796543 3796743 . + . ID=gene-CCO47_RS18760;Name=CCO47_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18760;old_locus_tag=CCO47_18760 NZ_CP075113.1 Protein Homology CDS 3796543 3796743 . + 0 ID=cds-WP_001518678.1;Parent=gene-CCO47_RS18760;Dbxref=GenBank:WP_001518678.1;Name=WP_001518678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=CCO47_RS18760;product=YaeP family protein;protein_id=WP_001518678.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3796730 3796990 . + . ID=gene-CCO47_RS18765;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=CCO47_RS18765;old_locus_tag=CCO47_18765 NZ_CP075113.1 Protein Homology CDS 3796730 3796990 . + 0 ID=cds-WP_000062330.1;Parent=gene-CCO47_RS18765;Dbxref=GenBank:WP_000062330.1;Name=WP_000062330.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=CCO47_RS18765;product=Rho-binding antiterminator;protein_id=WP_000062330.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3797074 3798366 . - . ID=gene-CCO47_RS18770;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=CCO47_RS18770;old_locus_tag=CCO47_18770 NZ_CP075113.1 Protein Homology CDS 3797074 3798366 . - 0 ID=cds-WP_000210070.1;Parent=gene-CCO47_RS18770;Dbxref=GenBank:WP_000210070.1;Name=WP_000210070.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459241.1;locus_tag=CCO47_RS18770;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_000210070.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3798429 3798818 . - . ID=gene-CCO47_RS18775;Name=CCO47_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18775;old_locus_tag=CCO47_18775 NZ_CP075113.1 Protein Homology CDS 3798429 3798818 . - 0 ID=cds-WP_000901088.1;Parent=gene-CCO47_RS18775;Dbxref=GenBank:WP_000901088.1;Name=WP_000901088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459240.1;locus_tag=CCO47_RS18775;product=VOC family protein;protein_id=WP_000901088.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3798874 3801015 . - . ID=gene-CCO47_RS18780;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=CCO47_RS18780;old_locus_tag=CCO47_18780 NZ_CP075113.1 Protein Homology CDS 3798874 3801015 . - 0 ID=cds-WP_001021060.1;Parent=gene-CCO47_RS18780;Dbxref=GenBank:WP_001021060.1;Name=WP_001021060.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459239.1;locus_tag=CCO47_RS18780;product=lysine decarboxylase LdcC;protein_id=WP_001021060.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3801091 3802854 . - . ID=gene-CCO47_RS18785;Name=CCO47_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18785;old_locus_tag=CCO47_18785 NZ_CP075113.1 Protein Homology CDS 3801091 3802854 . - 0 ID=cds-WP_000524168.1;Parent=gene-CCO47_RS18785;Dbxref=GenBank:WP_000524168.1;Name=WP_000524168.1;Ontology_term=GO:0006032,GO:0016998,GO:0004568;gbkey=CDS;go_function=chitinase activity|0004568||IEA;go_process=chitin catabolic process|0006032||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459238.1;locus_tag=CCO47_RS18785;product=chitinase;protein_id=WP_000524168.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3803034 3803993 . - . ID=gene-CCO47_RS18790;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=CCO47_RS18790;old_locus_tag=CCO47_18790 NZ_CP075113.1 Protein Homology CDS 3803034 3803993 . - 0 ID=cds-WP_000055754.1;Parent=gene-CCO47_RS18790;Dbxref=GenBank:WP_000055754.1;Name=WP_000055754.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=CCO47_RS18790;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055754.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3804006 3807488 . - . ID=gene-CCO47_RS18795;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=CCO47_RS18795;old_locus_tag=CCO47_18795 NZ_CP075113.1 Protein Homology CDS 3804006 3807488 . - 0 ID=cds-WP_001294827.1;Parent=gene-CCO47_RS18795;Dbxref=GenBank:WP_001294827.1;Name=WP_001294827.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459236.1;locus_tag=CCO47_RS18795;product=DNA polymerase III subunit alpha;protein_id=WP_001294827.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3807512 3808108 . - . ID=gene-CCO47_RS18800;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=CCO47_RS18800;old_locus_tag=CCO47_18800 NZ_CP075113.1 Protein Homology CDS 3807512 3808108 . - 0 ID=cds-WP_000569412.1;Parent=gene-CCO47_RS18800;Dbxref=GenBank:WP_000569412.1;Name=WP_000569412.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459235.1;locus_tag=CCO47_RS18800;product=ribonuclease HII;protein_id=WP_000569412.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3808105 3809253 . - . ID=gene-CCO47_RS18805;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=CCO47_RS18805;old_locus_tag=CCO47_18805 NZ_CP075113.1 Protein Homology CDS 3808105 3809253 . - 0 ID=cds-WP_000741216.1;Parent=gene-CCO47_RS18805;Dbxref=GenBank:WP_000741216.1;Name=WP_000741216.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459234.1;locus_tag=CCO47_RS18805;product=lipid-A-disaccharide synthase;protein_id=WP_000741216.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3809253 3810041 . - . ID=gene-CCO47_RS18810;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=CCO47_RS18810;old_locus_tag=CCO47_18810 NZ_CP075113.1 Protein Homology CDS 3809253 3810041 . - 0 ID=cds-WP_000565948.1;Parent=gene-CCO47_RS18810;Dbxref=GenBank:WP_000565948.1;Name=WP_000565948.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=CCO47_RS18810;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_000565948.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3810045 3810500 . - . ID=gene-CCO47_RS18815;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=CCO47_RS18815;old_locus_tag=CCO47_18815 NZ_CP075113.1 Protein Homology CDS 3810045 3810500 . - 0 ID=cds-WP_000210741.1;Parent=gene-CCO47_RS18815;Dbxref=GenBank:WP_000210741.1;Name=WP_000210741.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=CCO47_RS18815;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210741.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3810606 3811631 . - . ID=gene-CCO47_RS18820;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=CCO47_RS18820;old_locus_tag=CCO47_18820 NZ_CP075113.1 Protein Homology CDS 3810606 3811631 . - 0 ID=cds-WP_001139265.1;Parent=gene-CCO47_RS18820;Dbxref=GenBank:WP_001139265.1;Name=WP_001139265.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=CCO47_RS18820;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139265.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3811635 3812120 . - . ID=gene-CCO47_RS18825;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=CCO47_RS18825;old_locus_tag=CCO47_18825 NZ_CP075113.1 Protein Homology CDS 3811635 3812120 . - 0 ID=cds-WP_000758966.1;Parent=gene-CCO47_RS18825;Dbxref=GenBank:WP_000758966.1;Name=WP_000758966.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459230.1;locus_tag=CCO47_RS18825;product=molecular chaperone Skp;protein_id=WP_000758966.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3812243 3814657 . - . ID=gene-CCO47_RS18830;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=CCO47_RS18830;old_locus_tag=CCO47_18830 NZ_CP075113.1 Protein Homology CDS 3812243 3814657 . - 0 ID=cds-WP_001240929.1;Parent=gene-CCO47_RS18830;Dbxref=GenBank:WP_001240929.1;Name=WP_001240929.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459229.1;locus_tag=CCO47_RS18830;product=outer membrane protein assembly factor BamA;protein_id=WP_001240929.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3814689 3816041 . - . ID=gene-CCO47_RS18835;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=CCO47_RS18835;old_locus_tag=CCO47_18835 NZ_CP075113.1 Protein Homology CDS 3814689 3816041 . - 0 ID=cds-WP_000949013.1;Parent=gene-CCO47_RS18835;Dbxref=GenBank:WP_000949013.1;Name=WP_000949013.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=CCO47_RS18835;product=sigma E protease regulator RseP;protein_id=WP_000949013.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3816053 3816910 . - . ID=gene-CCO47_RS18840;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=CCO47_RS18840;old_locus_tag=CCO47_18840 NZ_CP075113.1 Protein Homology CDS 3816053 3816910 . - 0 ID=cds-WP_000922422.1;Parent=gene-CCO47_RS18840;Dbxref=GenBank:WP_000922422.1;Name=WP_000922422.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459227.1;locus_tag=CCO47_RS18840;product=phosphatidate cytidylyltransferase;protein_id=WP_000922422.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3816923 3817681 . - . ID=gene-CCO47_RS18845;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=CCO47_RS18845;old_locus_tag=CCO47_18845 NZ_CP075113.1 Protein Homology CDS 3816923 3817681 . - 0 ID=cds-WP_000947413.1;Parent=gene-CCO47_RS18845;Dbxref=GenBank:WP_000947413.1;Name=WP_000947413.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=CCO47_RS18845;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_000947413.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3817994 3819190 . - . ID=gene-CCO47_RS18850;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=CCO47_RS18850;old_locus_tag=CCO47_18850 NZ_CP075113.1 Protein Homology CDS 3817994 3819190 . - 0 ID=cds-WP_000811903.1;Parent=gene-CCO47_RS18850;Dbxref=GenBank:WP_000811903.1;Name=WP_000811903.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459225.1;locus_tag=CCO47_RS18850;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_000811903.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3819331 3819888 . - . ID=gene-CCO47_RS18855;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=CCO47_RS18855;old_locus_tag=CCO47_18855 NZ_CP075113.1 Protein Homology CDS 3819331 3819888 . - 0 ID=cds-WP_000622423.1;Parent=gene-CCO47_RS18855;Dbxref=GenBank:WP_000622423.1;Name=WP_000622423.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=CCO47_RS18855;product=ribosome recycling factor;protein_id=WP_000622423.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3820035 3820760 . - . ID=gene-CCO47_RS18860;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=CCO47_RS18860;old_locus_tag=CCO47_18860 NZ_CP075113.1 Protein Homology CDS 3820035 3820760 . - 0 ID=cds-WP_000224567.1;Parent=gene-CCO47_RS18860;Dbxref=GenBank:WP_000224567.1;Name=WP_000224567.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=CCO47_RS18860;product=UMP kinase;protein_id=WP_000224567.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3820905 3821756 . - . ID=gene-CCO47_RS18865;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=CCO47_RS18865;old_locus_tag=CCO47_18865 NZ_CP075113.1 Protein Homology CDS 3820905 3821756 . - 0 ID=cds-WP_000808106.1;Parent=gene-CCO47_RS18865;Dbxref=GenBank:WP_000808106.1;Name=WP_000808106.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=CCO47_RS18865;product=translation elongation factor Ts;protein_id=WP_000808106.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3822014 3822739 . - . ID=gene-CCO47_RS18870;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=CCO47_RS18870;old_locus_tag=CCO47_18870 NZ_CP075113.1 Protein Homology CDS 3822014 3822739 . - 0 ID=cds-WP_000246886.1;Parent=gene-CCO47_RS18870;Dbxref=GenBank:WP_000246886.1;Name=WP_000246886.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=CCO47_RS18870;product=30S ribosomal protein S2;protein_id=WP_000246886.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3823190 3823984 . + . ID=gene-CCO47_RS18875;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=CCO47_RS18875;old_locus_tag=CCO47_18875 NZ_CP075113.1 Protein Homology CDS 3823190 3823984 . + 0 ID=cds-WP_001018214.1;Parent=gene-CCO47_RS18875;Dbxref=GenBank:WP_001018214.1;Name=WP_001018214.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459220.1;locus_tag=CCO47_RS18875;product=type I methionyl aminopeptidase;protein_id=WP_001018214.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3824222 3826894 . + . ID=gene-CCO47_RS18880;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=CCO47_RS18880;old_locus_tag=CCO47_18880 NZ_CP075113.1 Protein Homology CDS 3824222 3826894 . + 0 ID=cds-WP_001675797.1;Parent=gene-CCO47_RS18880;Dbxref=GenBank:WP_001675797.1;Name=WP_001675797.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459219.1;locus_tag=CCO47_RS18880;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_001675797.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3826924 3827748 . + . ID=gene-CCO47_RS18885;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=CCO47_RS18885;old_locus_tag=CCO47_18885 NZ_CP075113.1 Protein Homology CDS 3826924 3827748 . + 0 ID=cds-WP_001186673.1;Parent=gene-CCO47_RS18885;Dbxref=GenBank:WP_001186673.1;Name=WP_001186673.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=L-lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=CCO47_RS18885;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186673.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3827784 3829085 . - . ID=gene-CCO47_RS18890;Name=CCO47_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18890;old_locus_tag=CCO47_18890 NZ_CP075113.1 Protein Homology CDS 3827784 3829085 . - 0 ID=cds-WP_000017197.1;Parent=gene-CCO47_RS18890;Dbxref=GenBank:WP_000017197.1;Name=WP_000017197.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=CCO47_RS18890;product=MFS transporter;protein_id=WP_000017197.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3829332 3829718 . + . ID=gene-CCO47_RS18895;Name=CCO47_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18895;old_locus_tag=CCO47_18895 NZ_CP075113.1 Protein Homology CDS 3829332 3829718 . + 0 ID=cds-WP_000272193.1;Parent=gene-CCO47_RS18895;Dbxref=GenBank:WP_000272193.1;Name=WP_000272193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=CCO47_RS18895;product=DUF3461 family protein;protein_id=WP_000272193.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3829904 3832936 . + . ID=gene-CCO47_RS18900;Name=CCO47_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18900;old_locus_tag=CCO47_18900 NZ_CP075113.1 Protein Homology CDS 3829904 3832936 . + 0 ID=cds-WP_000191142.1;Parent=gene-CCO47_RS18900;Dbxref=GenBank:WP_000191142.1;Name=WP_000191142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000191143.1;locus_tag=CCO47_RS18900;product=putative mucin/carbohydrate-binding domain-containing protein;protein_id=WP_000191142.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3832993 3834150 . - . ID=gene-CCO47_RS18905;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=CCO47_RS18905;old_locus_tag=CCO47_18905 NZ_CP075113.1 Protein Homology CDS 3832993 3834150 . - 0 ID=cds-WP_000929458.1;Parent=gene-CCO47_RS18905;Dbxref=GenBank:WP_000929458.1;Name=WP_000929458.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=CCO47_RS18905;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_000929458.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3834303 3835730 . - . ID=gene-CCO47_RS18910;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=CCO47_RS18910;old_locus_tag=CCO47_18910 NZ_CP075113.1 Protein Homology CDS 3834303 3835730 . - 0 ID=cds-WP_000753958.1;Parent=gene-CCO47_RS18910;Dbxref=GenBank:WP_000753958.1;Name=WP_000753958.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=CCO47_RS18910;product=serine endoprotease DegP;protein_id=WP_000753958.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3835860 3837377 . - . ID=gene-CCO47_RS18915;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=CCO47_RS18915;old_locus_tag=CCO47_18915 NZ_CP075113.1 Protein Homology CDS 3835860 3837377 . - 0 ID=cds-WP_000146450.1;Parent=gene-CCO47_RS18915;Dbxref=GenBank:WP_000146450.1;Name=WP_000146450.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459213.1;locus_tag=CCO47_RS18915;product=dGTPase;protein_id=WP_000146450.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3837462 3838160 . + . ID=gene-CCO47_RS18920;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=CCO47_RS18920;old_locus_tag=CCO47_18920 NZ_CP075113.1 Protein Homology CDS 3837462 3838160 . + 0 ID=cds-WP_000689822.1;Parent=gene-CCO47_RS18920;Dbxref=GenBank:WP_000689822.1;Name=WP_000689822.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459212.1;locus_tag=CCO47_RS18920;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689822.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3838153 3838953 . + . ID=gene-CCO47_RS18925;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=CCO47_RS18925;old_locus_tag=CCO47_18925 NZ_CP075113.1 Protein Homology CDS 3838153 3838953 . + 0 ID=cds-WP_000240674.1;Parent=gene-CCO47_RS18925;Dbxref=GenBank:WP_000240674.1;Name=WP_000240674.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=CCO47_RS18925;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_000240674.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3838990 3839613 . + . ID=gene-CCO47_RS18930;Name=CCO47_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18930;old_locus_tag=CCO47_18930 NZ_CP075113.1 Protein Homology CDS 3838990 3839613 . + 0 ID=cds-WP_000964234.1;Parent=gene-CCO47_RS18930;Dbxref=GenBank:WP_000964234.1;Name=WP_000964234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459210.1;locus_tag=CCO47_RS18930;product=TRIC cation channel family protein;protein_id=WP_000964234.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3839714 3840058 . - . ID=gene-CCO47_RS18935;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=CCO47_RS18935;old_locus_tag=CCO47_18935 NZ_CP075113.1 Protein Homology CDS 3839714 3840058 . - 0 ID=cds-WP_001278668.1;Parent=gene-CCO47_RS18935;Dbxref=GenBank:WP_001278668.1;Name=WP_001278668.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=CCO47_RS18935;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001278668.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3840140 3841561 . - . ID=gene-CCO47_RS18940;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=CCO47_RS18940;old_locus_tag=CCO47_18940 NZ_CP075113.1 Protein Homology CDS 3840140 3841561 . - 0 ID=cds-WP_000845428.1;Parent=gene-CCO47_RS18940;Dbxref=GenBank:WP_000845428.1;Name=WP_000845428.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=CCO47_RS18940;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_000845428.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3841731 3843011 . + . ID=gene-CCO47_RS18945;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=CCO47_RS18945;old_locus_tag=CCO47_18945 NZ_CP075113.1 Protein Homology CDS 3841731 3843011 . + 0 ID=cds-WP_000045249.1;Parent=gene-CCO47_RS18945;Dbxref=GenBank:WP_000045249.1;Name=WP_000045249.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=CCO47_RS18945;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_000045249.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3843119 3843958 . - . ID=gene-CCO47_RS18950;Name=stfH;gbkey=Gene;gene=stfH;gene_biotype=protein_coding;locus_tag=CCO47_RS18950;old_locus_tag=CCO47_18950 NZ_CP075113.1 Protein Homology CDS 3843119 3843958 . - 0 ID=cds-WP_001675802.1;Parent=gene-CCO47_RS18950;Dbxref=GenBank:WP_001675802.1;Name=WP_001675802.1;gbkey=CDS;gene=stfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459206.1;locus_tag=CCO47_RS18950;product=fimbrial adhesin StfH;protein_id=WP_001675802.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3843958 3844488 . - . ID=gene-CCO47_RS18955;Name=CCO47_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18955;old_locus_tag=CCO47_18955 NZ_CP075113.1 Protein Homology CDS 3843958 3844488 . - 0 ID=cds-WP_001129317.1;Parent=gene-CCO47_RS18955;Dbxref=GenBank:WP_001129317.1;Name=WP_001129317.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459205.1;locus_tag=CCO47_RS18955;product=fimbrial protein;protein_id=WP_001129317.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3844488 3844964 . - . ID=gene-CCO47_RS18960;Name=stfF;gbkey=Gene;gene=stfF;gene_biotype=protein_coding;locus_tag=CCO47_RS18960;old_locus_tag=CCO47_18960 NZ_CP075113.1 Protein Homology CDS 3844488 3844964 . - 0 ID=cds-WP_000725075.1;Parent=gene-CCO47_RS18960;Dbxref=GenBank:WP_000725075.1;Name=WP_000725075.1;gbkey=CDS;gene=stfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459204.1;locus_tag=CCO47_RS18960;product=fimbrial minor subunit StfF;protein_id=WP_000725075.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3844961 3845473 . - . ID=gene-CCO47_RS18965;Name=CCO47_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18965;old_locus_tag=CCO47_18965 NZ_CP075113.1 Protein Homology CDS 3844961 3845473 . - 0 ID=cds-WP_001250316.1;Parent=gene-CCO47_RS18965;Dbxref=GenBank:WP_001250316.1;Name=WP_001250316.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459203.1;locus_tag=CCO47_RS18965;product=fimbrial protein;protein_id=WP_001250316.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3845492 3846244 . - . ID=gene-CCO47_RS18970;Name=stfD;gbkey=Gene;gene=stfD;gene_biotype=protein_coding;locus_tag=CCO47_RS18970;old_locus_tag=CCO47_18970 NZ_CP075113.1 Protein Homology CDS 3845492 3846244 . - 0 ID=cds-WP_000987333.1;Parent=gene-CCO47_RS18970;Dbxref=GenBank:WP_000987333.1;Name=WP_000987333.1;gbkey=CDS;gene=stfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459202.1;locus_tag=CCO47_RS18970;product=fimbrial chaperone StfD;protein_id=WP_000987333.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3846262 3848919 . - . ID=gene-CCO47_RS18975;Name=CCO47_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS18975;old_locus_tag=CCO47_18975 NZ_CP075113.1 Protein Homology CDS 3846262 3848919 . - 0 ID=cds-WP_000951679.1;Parent=gene-CCO47_RS18975;Dbxref=GenBank:WP_000951679.1;Name=WP_000951679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459201.1;locus_tag=CCO47_RS18975;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_000951679.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3849005 3849565 . - . ID=gene-CCO47_RS18980;Name=stfA;gbkey=Gene;gene=stfA;gene_biotype=protein_coding;locus_tag=CCO47_RS18980;old_locus_tag=CCO47_18980 NZ_CP075113.1 Protein Homology CDS 3849005 3849565 . - 0 ID=cds-WP_001090553.1;Parent=gene-CCO47_RS18980;Dbxref=GenBank:WP_001090553.1;Name=WP_001090553.1;gbkey=CDS;gene=stfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459200.1;locus_tag=CCO47_RS18980;product=fimbrial major subunit StfA;protein_id=WP_001090553.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3850505 3852544 . - . ID=gene-CCO47_RS18985;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=CCO47_RS18985;old_locus_tag=CCO47_18985 NZ_CP075113.1 Protein Homology CDS 3850505 3852544 . - 0 ID=cds-WP_094905147.1;Parent=gene-CCO47_RS18985;Dbxref=GenBank:WP_094905147.1;Name=WP_094905147.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=CCO47_RS18985;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_094905147.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3852559 3853449 . - . ID=gene-CCO47_RS18990;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=CCO47_RS18990;old_locus_tag=CCO47_18990 NZ_CP075113.1 Protein Homology CDS 3852559 3853449 . - 0 ID=cds-WP_001205357.1;Parent=gene-CCO47_RS18990;Dbxref=GenBank:WP_001205357.1;Name=WP_001205357.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459198.1;locus_tag=CCO47_RS18990;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_001205357.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3853449 3854246 . - . ID=gene-CCO47_RS18995;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=CCO47_RS18995;old_locus_tag=CCO47_18995 NZ_CP075113.1 Protein Homology CDS 3853449 3854246 . - 0 ID=cds-WP_001157204.1;Parent=gene-CCO47_RS18995;Dbxref=GenBank:WP_001157204.1;Name=WP_001157204.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459197.1;locus_tag=CCO47_RS18995;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_001157204.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3854295 3856484 . - . ID=gene-CCO47_RS19000;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=CCO47_RS19000;old_locus_tag=CCO47_19000 NZ_CP075113.1 Protein Homology CDS 3854295 3856484 . - 0 ID=cds-WP_000113220.1;Parent=gene-CCO47_RS19000;Dbxref=GenBank:WP_000113220.1;Name=WP_000113220.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459196.1;locus_tag=CCO47_RS19000;product=ferrichrome porin FhuA;protein_id=WP_000113220.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3856777 3859299 . - . ID=gene-CCO47_RS19005;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=CCO47_RS19005;old_locus_tag=CCO47_19005 NZ_CP075113.1 Protein Homology CDS 3856777 3859299 . - 0 ID=cds-WP_000918129.1;Parent=gene-CCO47_RS19005;Dbxref=GenBank:WP_000918129.1;Name=WP_000918129.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=CCO47_RS19005;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_000918129.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3859440 3861869 . - . ID=gene-CCO47_RS19010;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=CCO47_RS19010;old_locus_tag=CCO47_19010 NZ_CP075113.1 Protein Homology CDS 3859440 3861869 . - 0 ID=cds-WP_001675805.1;Parent=gene-CCO47_RS19010;Dbxref=GenBank:WP_001675805.1;Name=WP_001675805.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308179.2;locus_tag=CCO47_RS19010;product=ATP-dependent helicase HrpB;protein_id=WP_001675805.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3861942 3862472 . + . ID=gene-CCO47_RS19015;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=CCO47_RS19015;old_locus_tag=CCO47_19015 NZ_CP075113.1 Protein Homology CDS 3861942 3862472 . + 0 ID=cds-WP_001294175.1;Parent=gene-CCO47_RS19015;Dbxref=GenBank:WP_001294175.1;Name=WP_001294175.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459193.1;locus_tag=CCO47_RS19015;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_001294175.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3862489 3863193 . + . ID=gene-CCO47_RS19020;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=CCO47_RS19020;old_locus_tag=CCO47_19020 NZ_CP075113.1 Protein Homology CDS 3862489 3863193 . + 0 ID=cds-WP_000899412.1;Parent=gene-CCO47_RS19020;Dbxref=GenBank:WP_000899412.1;Name=WP_000899412.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=CCO47_RS19020;product=DNA/RNA nuclease SfsA;protein_id=WP_000899412.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3863370 3863825 . + . ID=gene-CCO47_RS19025;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=CCO47_RS19025;old_locus_tag=CCO47_19025 NZ_CP075113.1 Protein Homology CDS 3863370 3863825 . + 0 ID=cds-WP_001155232.1;Parent=gene-CCO47_RS19025;Dbxref=GenBank:WP_001155232.1;Name=WP_001155232.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=CCO47_RS19025;product=RNA polymerase-binding protein DksA;protein_id=WP_001155232.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3863894 3864790 . + . ID=gene-CCO47_RS19030;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=CCO47_RS19030;old_locus_tag=CCO47_19030 NZ_CP075113.1 Protein Homology CDS 3863894 3864790 . + 0 ID=cds-WP_000132295.1;Parent=gene-CCO47_RS19030;Dbxref=GenBank:WP_000132295.1;Name=WP_000132295.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549989.1;locus_tag=CCO47_RS19030;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_000132295.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3864952 3866349 . + . ID=gene-CCO47_RS19035;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=CCO47_RS19035;old_locus_tag=CCO47_19035 NZ_CP075113.1 Protein Homology CDS 3864952 3866349 . + 0 ID=cds-WP_204365777.1;Parent=gene-CCO47_RS19035;Dbxref=GenBank:WP_204365777.1;Name=WP_204365777.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=CCO47_RS19035;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_204365777.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3866346 3866825 . + . ID=gene-CCO47_RS19040;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=CCO47_RS19040;old_locus_tag=CCO47_19040 NZ_CP075113.1 Protein Homology CDS 3866346 3866825 . + 0 ID=cds-WP_000150777.1;Parent=gene-CCO47_RS19040;Dbxref=GenBank:WP_000150777.1;Name=WP_000150777.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459188.1;locus_tag=CCO47_RS19040;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_000150777.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3866946 3867737 . + . ID=gene-CCO47_RS19045;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=CCO47_RS19045;old_locus_tag=CCO47_19045 NZ_CP075113.1 Protein Homology CDS 3866946 3867737 . + 0 ID=cds-WP_000805487.1;Parent=gene-CCO47_RS19045;Dbxref=GenBank:WP_000805487.1;Name=WP_000805487.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=CCO47_RS19045;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_000805487.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3867863 3868717 . + . ID=gene-CCO47_RS19050;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=CCO47_RS19050;old_locus_tag=CCO47_19050 NZ_CP075113.1 Protein Homology CDS 3867863 3868717 . + 0 ID=cds-WP_000905348.1;Parent=gene-CCO47_RS19050;Dbxref=GenBank:WP_000905348.1;Name=WP_000905348.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459186.1;locus_tag=CCO47_RS19050;product=pantoate--beta-alanine ligase;protein_id=WP_000905348.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3868812 3869192 . + . ID=gene-CCO47_RS19055;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=CCO47_RS19055;old_locus_tag=CCO47_19055 NZ_CP075113.1 Protein Homology CDS 3868812 3869192 . + 0 ID=cds-WP_000621527.1;Parent=gene-CCO47_RS19055;Dbxref=GenBank:WP_000621527.1;Name=WP_000621527.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=CCO47_RS19055;product=aspartate 1-decarboxylase;protein_id=WP_000621527.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3869199 3870428 . - . ID=gene-CCO47_RS19060;Name=CCO47_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19060;old_locus_tag=CCO47_19060 NZ_CP075113.1 Protein Homology CDS 3869199 3870428 . - 0 ID=cds-WP_000245312.1;Parent=gene-CCO47_RS19060;Dbxref=GenBank:WP_000245312.1;Name=WP_000245312.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=CCO47_RS19060;product=polysaccharide deacetylase family protein;protein_id=WP_000245312.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3870490 3870930 . - . ID=gene-CCO47_RS19065;Name=CCO47_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19065;old_locus_tag=CCO47_19065 NZ_CP075113.1 Protein Homology CDS 3870490 3870930 . - 0 ID=cds-WP_000901960.1;Parent=gene-CCO47_RS19065;Dbxref=GenBank:WP_000901960.1;Name=WP_000901960.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459183.1;locus_tag=CCO47_RS19065;product=PTS sugar transporter subunit IIA;protein_id=WP_000901960.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3871300 3871839 . + . ID=gene-CCO47_RS19070;Name=stiA;gbkey=Gene;gene=stiA;gene_biotype=protein_coding;locus_tag=CCO47_RS19070;old_locus_tag=CCO47_19070 NZ_CP075113.1 Protein Homology CDS 3871300 3871839 . + 0 ID=cds-WP_000777530.1;Parent=gene-CCO47_RS19070;Dbxref=GenBank:WP_000777530.1;Name=WP_000777530.1;gbkey=CDS;gene=stiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459182.1;locus_tag=CCO47_RS19070;product=Sti fimbria major subunit StiA;protein_id=WP_000777530.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3871887 3872570 . + . ID=gene-CCO47_RS19075;Name=stiB;gbkey=Gene;gene=stiB;gene_biotype=protein_coding;locus_tag=CCO47_RS19075;old_locus_tag=CCO47_19075 NZ_CP075113.1 Protein Homology CDS 3871887 3872570 . + 0 ID=cds-WP_001086413.1;Parent=gene-CCO47_RS19075;Dbxref=GenBank:WP_001086413.1;Name=WP_001086413.1;gbkey=CDS;gene=stiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459181.1;locus_tag=CCO47_RS19075;product=fimbrial biogenesis chaperone StiB;protein_id=WP_001086413.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3872597 3875143 . + . ID=gene-CCO47_RS19080;Name=CCO47_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19080;old_locus_tag=CCO47_19080 NZ_CP075113.1 Protein Homology CDS 3872597 3875143 . + 0 ID=cds-WP_001231783.1;Parent=gene-CCO47_RS19080;Dbxref=GenBank:WP_001231783.1;Name=WP_001231783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=CCO47_RS19080;product=fimbrial outer membrane usher protein;protein_id=WP_001231783.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3875152 3876231 . + . ID=gene-CCO47_RS19085;Name=CCO47_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19085;old_locus_tag=CCO47_19085 NZ_CP075113.1 Protein Homology CDS 3875152 3876231 . + 0 ID=cds-WP_000794039.1;Parent=gene-CCO47_RS19085;Dbxref=GenBank:WP_000794039.1;Name=WP_000794039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459179.1;locus_tag=CCO47_RS19085;product=fimbrial protein;protein_id=WP_000794039.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3876351 3877121 . - . ID=gene-CCO47_RS19090;Name=CCO47_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19090;old_locus_tag=CCO47_19090 NZ_CP075113.1 Protein Homology CDS 3876351 3877121 . - 0 ID=cds-WP_000983418.1;Parent=gene-CCO47_RS19090;Dbxref=GenBank:WP_000983418.1;Name=WP_000983418.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=CCO47_RS19090;product=ABC transporter permease;protein_id=WP_000983418.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3877118 3878044 . - . ID=gene-CCO47_RS19095;Name=CCO47_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19095;old_locus_tag=CCO47_19095 NZ_CP075113.1 Protein Homology CDS 3877118 3878044 . - 0 ID=cds-WP_000150619.1;Parent=gene-CCO47_RS19095;Dbxref=GenBank:WP_000150619.1;Name=WP_000150619.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=CCO47_RS19095;product=ABC transporter ATP-binding protein;protein_id=WP_000150619.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3878153 3878815 . + . ID=gene-CCO47_RS19100;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=CCO47_RS19100;old_locus_tag=CCO47_19100 NZ_CP075113.1 Protein Homology CDS 3878153 3878815 . + 0 ID=cds-WP_000651591.1;Parent=gene-CCO47_RS19100;Dbxref=GenBank:WP_000651591.1;Name=WP_000651591.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=CCO47_RS19100;product=carbonate dehydratase;protein_id=WP_000651591.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3878873 3879409 . - . ID=gene-CCO47_RS19105;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=CCO47_RS19105;old_locus_tag=CCO47_19105 NZ_CP075113.1 Protein Homology CDS 3878873 3879409 . - 0 ID=cds-WP_000683343.1;Parent=gene-CCO47_RS19105;Dbxref=GenBank:WP_000683343.1;Name=WP_000683343.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=CCO47_RS19105;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683343.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3879615 3882005 . + . ID=gene-CCO47_RS19110;Name=CCO47_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19110;old_locus_tag=CCO47_19110 NZ_CP075113.1 Protein Homology CDS 3879615 3882005 . + 0 ID=cds-WP_000829727.1;Parent=gene-CCO47_RS19110;Dbxref=GenBank:WP_000829727.1;Name=WP_000829727.1;Ontology_term=GO:0016614,GO:0048038,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=CCO47_RS19110;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;protein_id=WP_000829727.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3882083 3883693 . - . ID=gene-CCO47_RS19115;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=CCO47_RS19115;old_locus_tag=CCO47_19115 NZ_CP075113.1 Protein Homology CDS 3882083 3883693 . - 0 ID=cds-WP_094912451.1;Parent=gene-CCO47_RS19115;Dbxref=GenBank:WP_094912451.1;Name=WP_094912451.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459173.1;locus_tag=CCO47_RS19115;product=multicopper oxidase CueO;protein_id=WP_094912451.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3883895 3884242 . + . ID=gene-CCO47_RS19120;Name=CCO47_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19120;old_locus_tag=CCO47_19120 NZ_CP075113.1 Protein Homology CDS 3883895 3884242 . + 0 ID=cds-WP_000846615.1;Parent=gene-CCO47_RS19120;Dbxref=GenBank:WP_000846615.1;Name=WP_000846615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=CCO47_RS19120;product=YacC family pilotin-like protein;protein_id=WP_000846615.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3884349 3885209 . + . ID=gene-CCO47_RS19125;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=CCO47_RS19125;old_locus_tag=CCO47_19125 NZ_CP075113.1 Protein Homology CDS 3884349 3885209 . + 0 ID=cds-WP_000829968.1;Parent=gene-CCO47_RS19125;Dbxref=GenBank:WP_000829968.1;Name=WP_000829968.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459171.1;locus_tag=CCO47_RS19125;product=polyamine aminopropyltransferase;protein_id=WP_000829968.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3885230 3886024 . + . ID=gene-CCO47_RS19130;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=CCO47_RS19130;old_locus_tag=CCO47_19130 NZ_CP075113.1 Protein Homology CDS 3885230 3886024 . + 0 ID=cds-WP_000734294.1;Parent=gene-CCO47_RS19130;Dbxref=GenBank:WP_000734294.1;Name=WP_000734294.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459170.1;locus_tag=CCO47_RS19130;product=adenosylmethionine decarboxylase;protein_id=WP_000734294.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3886054 3886821 . - . ID=gene-CCO47_RS19135;Name=CCO47_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19135;old_locus_tag=CCO47_19135 NZ_CP075113.1 Protein Homology CDS 3886054 3886821 . - 0 ID=cds-WP_000678254.1;Parent=gene-CCO47_RS19135;Dbxref=GenBank:WP_000678254.1;Name=WP_000678254.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459169.1;locus_tag=CCO47_RS19135;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000678254.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3886831 3887814 . - . ID=gene-CCO47_RS19140;Name=CCO47_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19140;old_locus_tag=CCO47_19140 NZ_CP075113.1 Protein Homology CDS 3886831 3887814 . - 0 ID=cds-WP_094912449.1;Parent=gene-CCO47_RS19140;Dbxref=GenBank:WP_094912449.1;Name=WP_094912449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=CCO47_RS19140;product=D-threonate 4-phosphate dehydrogenase;protein_id=WP_094912449.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3887804 3889075 . - . ID=gene-CCO47_RS19145;Name=dtnK;gbkey=Gene;gene=dtnK;gene_biotype=protein_coding;locus_tag=CCO47_RS19145;old_locus_tag=CCO47_19145 NZ_CP075113.1 Protein Homology CDS 3887804 3889075 . - 0 ID=cds-WP_000783302.1;Parent=gene-CCO47_RS19145;Dbxref=GenBank:WP_000783302.1;Name=WP_000783302.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;gene=dtnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=CCO47_RS19145;product=D-threonate kinase;protein_id=WP_000783302.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3889072 3890025 . - . ID=gene-CCO47_RS19150;Name=CCO47_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19150;old_locus_tag=CCO47_19150 NZ_CP075113.1 Protein Homology CDS 3889072 3890025 . - 0 ID=cds-WP_001022092.1;Parent=gene-CCO47_RS19150;Dbxref=GenBank:WP_001022092.1;Name=WP_001022092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459166.1;locus_tag=CCO47_RS19150;product=2-keto-3-deoxygluconate permease 1;protein_id=WP_001022092.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3890260 3890622 . - . ID=gene-CCO47_RS19155;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=CCO47_RS19155;old_locus_tag=CCO47_19155 NZ_CP075113.1 Protein Homology CDS 3890260 3890622 . - 0 ID=cds-WP_000384308.1;Parent=gene-CCO47_RS19155;Dbxref=GenBank:WP_000384308.1;Name=WP_000384308.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=CCO47_RS19155;product=protein YacL;protein_id=WP_000384308.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3890893 3891216 . + . ID=gene-CCO47_RS19160;Name=CCO47_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19160;old_locus_tag=CCO47_19160 NZ_CP075113.1 Protein Homology CDS 3890893 3891216 . + 0 ID=cds-WP_001101536.1;Parent=gene-CCO47_RS19160;Dbxref=GenBank:WP_001101536.1;Name=WP_001101536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101536.1;locus_tag=CCO47_RS19160;product=low molecular weight protein tyrosine phosphatase family protein;protein_id=WP_001101536.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3891634 3892098 . + . ID=gene-CCO47_RS19165;Name=cbrB;gbkey=Gene;gene=cbrB;gene_biotype=protein_coding;gene_synonym=yieI;locus_tag=CCO47_RS19165;old_locus_tag=CCO47_19165 NZ_CP075113.1 Protein Homology CDS 3891634 3892098 . + 0 ID=cds-WP_000110439.1;Parent=gene-CCO47_RS19165;Dbxref=GenBank:WP_000110439.1;Name=WP_000110439.1;gbkey=CDS;gene=cbrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110434.1;locus_tag=CCO47_RS19165;product=inner membrane protein CbrB;protein_id=WP_000110439.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3892138 3894735 . - . ID=gene-CCO47_RS19170;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=CCO47_RS19170;old_locus_tag=CCO47_19170 NZ_CP075113.1 Protein Homology CDS 3892138 3894735 . - 0 ID=cds-WP_000888959.1;Parent=gene-CCO47_RS19170;Dbxref=GenBank:WP_000888959.1;Name=WP_000888959.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=CCO47_RS19170;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_000888959.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3895124 3896749 . + . ID=gene-CCO47_RS19175;Name=CCO47_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19175;old_locus_tag=CCO47_19175 NZ_CP075113.1 Protein Homology CDS 3895124 3896749 . + 0 ID=cds-WP_000174538.1;Parent=gene-CCO47_RS19175;Dbxref=GenBank:WP_000174538.1;Name=WP_000174538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459162.2;locus_tag=CCO47_RS19175;product=DUF3300 domain-containing protein;protein_id=WP_000174538.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3896762 3897553 . + . ID=gene-CCO47_RS19180;Name=CCO47_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19180;old_locus_tag=CCO47_19180 NZ_CP075113.1 Protein Homology CDS 3896762 3897553 . + 0 ID=cds-WP_000757442.1;Parent=gene-CCO47_RS19180;Dbxref=GenBank:WP_000757442.1;Name=WP_000757442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459161.1;locus_tag=CCO47_RS19180;product=DUF2950 family protein;protein_id=WP_000757442.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3897591 3897875 . - . ID=gene-CCO47_RS19185;Name=CCO47_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19185;old_locus_tag=CCO47_19185 NZ_CP075113.1 Protein Homology CDS 3897591 3897875 . - 0 ID=cds-WP_000765363.1;Parent=gene-CCO47_RS19185;Dbxref=GenBank:WP_000765363.1;Name=WP_000765363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459160.1;locus_tag=CCO47_RS19185;product=outer membrane protein;protein_id=WP_000765363.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3898164 3899588 . - . ID=gene-CCO47_RS19190;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=CCO47_RS19190;old_locus_tag=CCO47_19190 NZ_CP075113.1 Protein Homology CDS 3898164 3899588 . - 0 ID=cds-WP_001537804.1;Parent=gene-CCO47_RS19190;Dbxref=GenBank:WP_001537804.1;Name=WP_001537804.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=CCO47_RS19190;product=dihydrolipoyl dehydrogenase;protein_id=WP_001537804.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3899789 3901678 . - . ID=gene-CCO47_RS19195;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=CCO47_RS19195;old_locus_tag=CCO47_19195 NZ_CP075113.1 Protein Homology CDS 3899789 3901678 . - 0 ID=cds-WP_000963597.1;Parent=gene-CCO47_RS19195;Dbxref=GenBank:WP_000963597.1;Name=WP_000963597.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459158.2;locus_tag=CCO47_RS19195;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_000963597.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3901693 3904356 . - . ID=gene-CCO47_RS19200;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=CCO47_RS19200;old_locus_tag=CCO47_19200 NZ_CP075113.1 Protein Homology CDS 3901693 3904356 . - 0 ID=cds-WP_000003852.1;Parent=gene-CCO47_RS19200;Dbxref=GenBank:WP_000003852.1;Name=WP_000003852.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=CCO47_RS19200;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_000003852.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3904516 3905280 . - . ID=gene-CCO47_RS19205;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=CCO47_RS19205;old_locus_tag=CCO47_19205 NZ_CP075113.1 Protein Homology CDS 3904516 3905280 . - 0 ID=cds-WP_000331771.1;Parent=gene-CCO47_RS19205;Dbxref=GenBank:WP_000331771.1;Name=WP_000331771.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459156.1;locus_tag=CCO47_RS19205;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331771.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3905843 3907216 . + . ID=gene-CCO47_RS19210;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=CCO47_RS19210;old_locus_tag=CCO47_19210 NZ_CP075113.1 Protein Homology CDS 3905843 3907216 . + 0 ID=cds-WP_162138164.1;Parent=gene-CCO47_RS19210;Dbxref=GenBank:WP_162138164.1;Name=WP_162138164.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459155.1;locus_tag=CCO47_RS19210;product=aromatic amino acid transporter AroP;protein_id=WP_162138164.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3907380 3908786 . + . ID=gene-CCO47_RS19215;Name=CCO47_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19215;old_locus_tag=CCO47_19215 NZ_CP075113.1 Protein Homology CDS 3907380 3908786 . + 0 ID=cds-WP_000357537.1;Parent=gene-CCO47_RS19215;Dbxref=GenBank:WP_000357537.1;Name=WP_000357537.1;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=monoatomic cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=CCO47_RS19215;product=glycoside-pentoside-hexuronide (GPH):cation symporter;protein_id=WP_000357537.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3908786 3909736 . + . ID=gene-CCO47_RS19220;Name=CCO47_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19220;old_locus_tag=CCO47_19220 NZ_CP075113.1 Protein Homology CDS 3908786 3909736 . + 0 ID=cds-WP_000024767.1;Parent=gene-CCO47_RS19220;Dbxref=GenBank:WP_000024767.1;Name=WP_000024767.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459153.1;locus_tag=CCO47_RS19220;product=glycoside hydrolase family 43 protein;protein_id=WP_000024767.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3909828 3910682 . - . ID=gene-CCO47_RS19225;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=CCO47_RS19225;old_locus_tag=CCO47_19225 NZ_CP075113.1 Protein Homology CDS 3909828 3910682 . - 0 ID=cds-WP_000172039.1;Parent=gene-CCO47_RS19225;Dbxref=GenBank:WP_000172039.1;Name=WP_000172039.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=CCO47_RS19225;product=beta-lactamase regulator AmpE;protein_id=WP_000172039.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3910679 3911242 . - . ID=gene-CCO47_RS19230;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=CCO47_RS19230;old_locus_tag=CCO47_19230 NZ_CP075113.1 Protein Homology CDS 3910679 3911242 . - 0 ID=cds-WP_000936326.1;Parent=gene-CCO47_RS19230;Dbxref=GenBank:WP_000936326.1;Name=WP_000936326.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459151.1;locus_tag=CCO47_RS19230;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000936326.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3911330 3912223 . + . ID=gene-CCO47_RS19235;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=CCO47_RS19235;old_locus_tag=CCO47_19235 NZ_CP075113.1 Protein Homology CDS 3911330 3912223 . + 0 ID=cds-WP_001135135.1;Parent=gene-CCO47_RS19235;Dbxref=GenBank:WP_001135135.1;Name=WP_001135135.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459150.1;locus_tag=CCO47_RS19235;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_001135135.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3912445 3912882 . + . ID=gene-CCO47_RS19240;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=CCO47_RS19240;old_locus_tag=CCO47_19240 NZ_CP075113.1 Protein Homology CDS 3912445 3912882 . + 0 ID=cds-WP_000414989.1;Parent=gene-CCO47_RS19240;Dbxref=GenBank:WP_000414989.1;Name=WP_000414989.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459149.1;locus_tag=CCO47_RS19240;product=prepilin peptidase-dependent pilin;protein_id=WP_000414989.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3912892 3914277 . + . ID=gene-CCO47_RS19245;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=CCO47_RS19245;old_locus_tag=CCO47_19245 NZ_CP075113.1 Protein Homology CDS 3912892 3914277 . + 0 ID=cds-WP_000650593.1;Parent=gene-CCO47_RS19245;Dbxref=GenBank:WP_000650593.1;Name=WP_000650593.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459148.1;locus_tag=CCO47_RS19245;product=type II secretion system protein GspE;protein_id=WP_000650593.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3914267 3915469 . + . ID=gene-CCO47_RS19250;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=CCO47_RS19250;old_locus_tag=CCO47_19250 NZ_CP075113.1 Protein Homology CDS 3914267 3915469 . + 0 ID=cds-WP_000114102.1;Parent=gene-CCO47_RS19250;Dbxref=GenBank:WP_000114102.1;Name=WP_000114102.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459147.1;locus_tag=CCO47_RS19250;product=protein transport protein HofC;protein_id=WP_000114102.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3915500 3916543 . - . ID=gene-CCO47_RS19255;Name=CCO47_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19255;old_locus_tag=CCO47_19255 NZ_CP075113.1 Protein Homology CDS 3915500 3916543 . - 0 ID=cds-WP_001217365.1;Parent=gene-CCO47_RS19255;Dbxref=GenBank:WP_001217365.1;Name=WP_001217365.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=CCO47_RS19255;product=GMP reductase;protein_id=WP_001217365.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3916769 3917389 . + . ID=gene-CCO47_RS19260;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=CCO47_RS19260;old_locus_tag=CCO47_19260 NZ_CP075113.1 Protein Homology CDS 3916769 3917389 . + 0 ID=cds-WP_001270907.1;Parent=gene-CCO47_RS19260;Dbxref=GenBank:WP_001270907.1;Name=WP_001270907.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459145.1;locus_tag=CCO47_RS19260;product=dephospho-CoA kinase;protein_id=WP_001270907.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3917389 3918132 . + . ID=gene-CCO47_RS19265;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=CCO47_RS19265;old_locus_tag=CCO47_19265 NZ_CP075113.1 Protein Homology CDS 3917389 3918132 . + 0 ID=cds-WP_000557441.1;Parent=gene-CCO47_RS19265;Dbxref=GenBank:WP_000557441.1;Name=WP_000557441.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459144.1;locus_tag=CCO47_RS19265;product=cell division protein ZapD;protein_id=WP_000557441.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3918142 3918333 . + . ID=gene-CCO47_RS19270;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=CCO47_RS19270;old_locus_tag=CCO47_19270 NZ_CP075113.1 Protein Homology CDS 3918142 3918333 . + 0 ID=cds-WP_001286419.1;Parent=gene-CCO47_RS19270;Dbxref=GenBank:WP_001286419.1;Name=WP_001286419.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459143.1;locus_tag=CCO47_RS19270;product=DNA gyrase inhibitor YacG;protein_id=WP_001286419.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3918330 3919271 . - . ID=gene-CCO47_RS19275;Name=CCO47_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19275;old_locus_tag=CCO47_19275 NZ_CP075113.1 Protein Homology CDS 3918330 3919271 . - 0 ID=cds-WP_001538994.1;Parent=gene-CCO47_RS19275;Dbxref=GenBank:WP_001538994.1;Name=WP_001538994.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697068.1;locus_tag=CCO47_RS19275;product=LysR family transcriptional regulator;protein_id=WP_001538994.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3919357 3920346 . + . ID=gene-CCO47_RS19280;Name=CCO47_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19280;old_locus_tag=CCO47_19280 NZ_CP075113.1 Protein Homology CDS 3919357 3920346 . + 0 ID=cds-WP_001200040.1;Parent=gene-CCO47_RS19280;Dbxref=GenBank:WP_001200040.1;Name=WP_001200040.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200034.1;locus_tag=CCO47_RS19280;product=aldo/keto reductase;protein_id=WP_001200040.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3920380 3920775 . - . ID=gene-CCO47_RS19285;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=CCO47_RS19285;old_locus_tag=CCO47_19285 NZ_CP075113.1 Protein Homology CDS 3920380 3920775 . - 0 ID=cds-WP_000736053.1;Parent=gene-CCO47_RS19285;Dbxref=GenBank:WP_000736053.1;Name=WP_000736053.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459142.1;locus_tag=CCO47_RS19285;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_000736053.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3920927 3923632 . - . ID=gene-CCO47_RS19290;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=CCO47_RS19290;old_locus_tag=CCO47_19290 NZ_CP075113.1 Protein Homology CDS 3920927 3923632 . - 0 ID=cds-WP_000905756.1;Parent=gene-CCO47_RS19290;Dbxref=GenBank:WP_000905756.1;Name=WP_000905756.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=CCO47_RS19290;product=preprotein translocase subunit SecA;protein_id=WP_000905756.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3923694 3924191 . - . ID=gene-CCO47_RS19295;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=CCO47_RS19295;old_locus_tag=CCO47_19295 NZ_CP075113.1 Protein Homology CDS 3923694 3924191 . - 0 ID=cds-WP_000014333.1;Parent=gene-CCO47_RS19295;Dbxref=GenBank:WP_000014333.1;Name=WP_000014333.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308128.2;locus_tag=CCO47_RS19295;product=secA translation cis-regulator SecM;protein_id=WP_000014333.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3924470 3925387 . - . ID=gene-CCO47_RS19300;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=CCO47_RS19300;old_locus_tag=CCO47_19300 NZ_CP075113.1 Protein Homology CDS 3924470 3925387 . - 0 ID=cds-WP_000595487.1;Parent=gene-CCO47_RS19300;Dbxref=GenBank:WP_000595487.1;Name=WP_000595487.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=CCO47_RS19300;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595487.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3925488 3926639 . - . ID=gene-CCO47_RS19305;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=CCO47_RS19305;old_locus_tag=CCO47_19305 NZ_CP075113.1 Protein Homology CDS 3925488 3926639 . - 0 ID=cds-WP_000462784.1;Parent=gene-CCO47_RS19305;Dbxref=GenBank:WP_000462784.1;Name=WP_000462784.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=CCO47_RS19305;product=cell division protein FtsZ;protein_id=WP_000462784.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3926700 3927962 . - . ID=gene-CCO47_RS19310;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=CCO47_RS19310;old_locus_tag=CCO47_19310 NZ_CP075113.1 Protein Homology CDS 3926700 3927962 . - 0 ID=cds-WP_000588463.1;Parent=gene-CCO47_RS19310;Dbxref=GenBank:WP_000588463.1;Name=WP_000588463.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=CCO47_RS19310;product=cell division protein FtsA;protein_id=WP_000588463.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3927959 3928789 . - . ID=gene-CCO47_RS19315;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=CCO47_RS19315;old_locus_tag=CCO47_19315 NZ_CP075113.1 Protein Homology CDS 3927959 3928789 . - 0 ID=cds-WP_000075724.1;Parent=gene-CCO47_RS19315;Dbxref=GenBank:WP_000075724.1;Name=WP_000075724.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459136.1;locus_tag=CCO47_RS19315;product=cell division protein FtsQ;protein_id=WP_000075724.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3928791 3929648 . - . ID=gene-CCO47_RS19320;Name=CCO47_RS19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19320;old_locus_tag=CCO47_19320 NZ_CP075113.1 Protein Homology CDS 3928791 3929648 . - 0 ID=cds-WP_000763901.1;Parent=gene-CCO47_RS19320;Dbxref=GenBank:WP_000763901.1;Name=WP_000763901.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459135.1;locus_tag=CCO47_RS19320;product=D-alanine--D-alanine ligase;protein_id=WP_000763901.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3929641 3931116 . - . ID=gene-CCO47_RS19325;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=CCO47_RS19325;old_locus_tag=CCO47_19325 NZ_CP075113.1 Protein Homology CDS 3929641 3931116 . - 0 ID=cds-WP_001096072.1;Parent=gene-CCO47_RS19325;Dbxref=GenBank:WP_001096072.1;Name=WP_001096072.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=CCO47_RS19325;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001096072.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3931235 3932302 . - . ID=gene-CCO47_RS19330;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=CCO47_RS19330;old_locus_tag=CCO47_19330 NZ_CP075113.1 Protein Homology CDS 3931235 3932302 . - 0 ID=cds-WP_000016616.1;Parent=gene-CCO47_RS19330;Dbxref=GenBank:WP_000016616.1;Name=WP_000016616.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=CCO47_RS19330;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_000016616.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3932299 3933543 . - . ID=gene-CCO47_RS19335;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=CCO47_RS19335;old_locus_tag=CCO47_19335 NZ_CP075113.1 Protein Homology CDS 3932299 3933543 . - 0 ID=cds-WP_001239803.1;Parent=gene-CCO47_RS19335;Dbxref=GenBank:WP_001239803.1;Name=WP_001239803.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459132.1;locus_tag=CCO47_RS19335;product=cell division protein FtsW;protein_id=WP_001239803.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3933543 3934859 . - . ID=gene-CCO47_RS19340;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=CCO47_RS19340;old_locus_tag=CCO47_19340 NZ_CP075113.1 Protein Homology CDS 3933543 3934859 . - 0 ID=cds-WP_000796445.1;Parent=gene-CCO47_RS19340;Dbxref=GenBank:WP_000796445.1;Name=WP_000796445.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=CCO47_RS19340;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_000796445.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3934862 3935944 . - . ID=gene-CCO47_RS19345;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=CCO47_RS19345;old_locus_tag=CCO47_19345 NZ_CP075113.1 Protein Homology CDS 3934862 3935944 . - 0 ID=cds-WP_000964141.1;Parent=gene-CCO47_RS19345;Dbxref=GenBank:WP_000964141.1;Name=WP_000964141.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=CCO47_RS19345;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964141.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3935938 3937296 . - . ID=gene-CCO47_RS19350;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=CCO47_RS19350;old_locus_tag=CCO47_19350 NZ_CP075113.1 Protein Homology CDS 3935938 3937296 . - 0 ID=cds-WP_000626630.1;Parent=gene-CCO47_RS19350;Dbxref=GenBank:WP_000626630.1;Name=WP_000626630.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459129.1;locus_tag=CCO47_RS19350;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_000626630.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3937293 3938780 . - . ID=gene-CCO47_RS19355;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=CCO47_RS19355;old_locus_tag=CCO47_19355 NZ_CP075113.1 Protein Homology CDS 3937293 3938780 . - 0 ID=cds-WP_000775071.1;Parent=gene-CCO47_RS19355;Dbxref=GenBank:WP_000775071.1;Name=WP_000775071.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459128.1;locus_tag=CCO47_RS19355;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_000775071.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3938767 3940533 . - . ID=gene-CCO47_RS19360;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=CCO47_RS19360;old_locus_tag=CCO47_19360 NZ_CP075113.1 Protein Homology CDS 3938767 3940533 . - 0 ID=cds-WP_000642237.1;Parent=gene-CCO47_RS19360;Dbxref=GenBank:WP_000642237.1;Name=WP_000642237.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=CCO47_RS19360;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642237.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3940549 3940914 . - . ID=gene-CCO47_RS19365;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=CCO47_RS19365;old_locus_tag=CCO47_19365 NZ_CP075113.1 Protein Homology CDS 3940549 3940914 . - 0 ID=cds-WP_000625651.1;Parent=gene-CCO47_RS19365;Dbxref=GenBank:WP_000625651.1;Name=WP_000625651.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=CCO47_RS19365;product=cell division protein FtsL;protein_id=WP_000625651.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3940911 3941852 . - . ID=gene-CCO47_RS19370;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=CCO47_RS19370;old_locus_tag=CCO47_19370 NZ_CP075113.1 Protein Homology CDS 3940911 3941852 . - 0 ID=cds-WP_000970444.1;Parent=gene-CCO47_RS19370;Dbxref=GenBank:WP_000970444.1;Name=WP_000970444.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=CCO47_RS19370;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970444.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3941854 3942312 . - . ID=gene-CCO47_RS19375;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=CCO47_RS19375;old_locus_tag=CCO47_19375 NZ_CP075113.1 Protein Homology CDS 3941854 3942312 . - 0 ID=cds-WP_000488294.1;Parent=gene-CCO47_RS19375;Dbxref=GenBank:WP_000488294.1;Name=WP_000488294.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=CCO47_RS19375;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_000488294.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3942918 3943922 . - . ID=gene-CCO47_RS19380;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=CCO47_RS19380;old_locus_tag=CCO47_19380 NZ_CP075113.1 Protein Homology CDS 3942918 3943922 . - 0 ID=cds-WP_000762406.1;Parent=gene-CCO47_RS19380;Dbxref=GenBank:WP_000762406.1;Name=WP_000762406.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459123.1;locus_tag=CCO47_RS19380;product=catabolite repressor/activator;protein_id=WP_000762406.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3944206 3944697 . - . ID=gene-CCO47_RS19385;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=CCO47_RS19385;old_locus_tag=CCO47_19385 NZ_CP075113.1 Protein Homology CDS 3944206 3944697 . - 0 ID=cds-WP_001563086.1;Parent=gene-CCO47_RS19385;Dbxref=GenBank:WP_001563086.1;Name=WP_001563086.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=CCO47_RS19385;product=acetolactate synthase small subunit;protein_id=WP_001563086.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3944700 3946424 . - . ID=gene-CCO47_RS19390;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=CCO47_RS19390;old_locus_tag=CCO47_19390 NZ_CP075113.1 Protein Homology CDS 3944700 3946424 . - 0 ID=cds-WP_000425607.1;Parent=gene-CCO47_RS19390;Dbxref=GenBank:WP_000425607.1;Name=WP_000425607.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=CCO47_RS19390;product=acetolactate synthase 3 large subunit;protein_id=WP_000425607.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3946746 3947690 . - . ID=gene-CCO47_RS19395;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=CCO47_RS19395;old_locus_tag=CCO47_19395 NZ_CP075113.1 Protein Homology CDS 3946746 3947690 . - 0 ID=cds-WP_001115426.1;Parent=gene-CCO47_RS19395;Dbxref=GenBank:WP_001115426.1;Name=WP_001115426.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459120.1;locus_tag=CCO47_RS19395;product=transcriptional regulator LeuO;protein_id=WP_001115426.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3948347 3948433 . + . ID=gene-CCO47_RS19400;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=CCO47_RS19400;old_locus_tag=CCO47_19400 NZ_CP075113.1 Protein Homology CDS 3948347 3948433 . + 0 ID=cds-WP_001575587.1;Parent=gene-CCO47_RS19400;Dbxref=GenBank:WP_001575587.1;Name=WP_001575587.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459119.1;locus_tag=CCO47_RS19400;product=leu operon leader peptide;protein_id=WP_001575587.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3948521 3950092 . + . ID=gene-CCO47_RS19405;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=CCO47_RS19405;old_locus_tag=CCO47_19405 NZ_CP075113.1 Protein Homology CDS 3948521 3950092 . + 0 ID=cds-WP_000082819.1;Parent=gene-CCO47_RS19405;Dbxref=GenBank:WP_000082819.1;Name=WP_000082819.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=CCO47_RS19405;product=2-isopropylmalate synthase;protein_id=WP_000082819.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3950092 3951183 . + . ID=gene-CCO47_RS19410;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=CCO47_RS19410;old_locus_tag=CCO47_19410 NZ_CP075113.1 Protein Homology CDS 3950092 3951183 . + 0 ID=cds-WP_000042325.1;Parent=gene-CCO47_RS19410;Dbxref=GenBank:WP_000042325.1;Name=WP_000042325.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=CCO47_RS19410;product=3-isopropylmalate dehydrogenase;protein_id=WP_000042325.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3951186 3952586 . + . ID=gene-CCO47_RS19415;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=CCO47_RS19415;old_locus_tag=CCO47_19415 NZ_CP075113.1 Protein Homology CDS 3951186 3952586 . + 0 ID=cds-WP_001140632.1;Parent=gene-CCO47_RS19415;Dbxref=GenBank:WP_001140632.1;Name=WP_001140632.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459116.1;locus_tag=CCO47_RS19415;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001140632.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3952597 3953202 . + . ID=gene-CCO47_RS19420;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=CCO47_RS19420;old_locus_tag=CCO47_19420 NZ_CP075113.1 Protein Homology CDS 3952597 3953202 . + 0 ID=cds-WP_000818268.1;Parent=gene-CCO47_RS19420;Dbxref=GenBank:WP_000818268.1;Name=WP_000818268.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=CCO47_RS19420;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000818268.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3953256 3953537 . - . ID=gene-CCO47_RS19425;Name=CCO47_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19425;old_locus_tag=CCO47_19425 NZ_CP075113.1 Protein Homology CDS 3953256 3953537 . - 0 ID=cds-WP_000755258.1;Parent=gene-CCO47_RS19425;Dbxref=GenBank:WP_000755258.1;Name=WP_000755258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264185.1;locus_tag=CCO47_RS19425;product=DUF5339 family protein;protein_id=WP_000755258.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3953857 3953979 . - . ID=gene-CCO47_RS19430;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=CCO47_RS19430;old_locus_tag=CCO47_19430 NZ_CP075113.1 Protein Homology CDS 3953857 3953979 . - 0 ID=cds-WP_001248755.1;Parent=gene-CCO47_RS19430;Dbxref=GenBank:WP_001248755.1;Name=WP_001248755.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import across plasma membrane|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=CCO47_RS19430;product=glucose uptake inhibitor SgrT;protein_id=WP_001248755.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3954072 3955730 . + . ID=gene-CCO47_RS19435;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=CCO47_RS19435;old_locus_tag=CCO47_19435 NZ_CP075113.1 Protein Homology CDS 3954072 3955730 . + 0 ID=cds-WP_001139043.1;Parent=gene-CCO47_RS19435;Dbxref=GenBank:WP_001139043.1;Name=WP_001139043.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459114.1;locus_tag=CCO47_RS19435;product=HTH-type transcriptional regulator SgrR;protein_id=WP_001139043.1;transl_table=11 NZ_CP075113.1 cmsearch riboswitch 3955777 3955876 . + . ID=id-NZ_CP075113.1:3955777..3955876;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CP075113.1 RefSeq gene 3955908 3956891 . + . ID=gene-CCO47_RS19440;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=CCO47_RS19440;old_locus_tag=CCO47_19440 NZ_CP075113.1 Protein Homology CDS 3955908 3956891 . + 0 ID=cds-WP_000915326.1;Parent=gene-CCO47_RS19440;Dbxref=GenBank:WP_000915326.1;Name=WP_000915326.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459113.1;locus_tag=CCO47_RS19440;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_000915326.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3956867 3958477 . + . ID=gene-CCO47_RS19445;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=CCO47_RS19445;old_locus_tag=CCO47_19445 NZ_CP075113.1 Protein Homology CDS 3956867 3958477 . + 0 ID=cds-WP_000235640.1;Parent=gene-CCO47_RS19445;Dbxref=GenBank:WP_000235640.1;Name=WP_000235640.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459112.1;locus_tag=CCO47_RS19445;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_000235640.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3958461 3959168 . + . ID=gene-CCO47_RS19450;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=CCO47_RS19450;old_locus_tag=CCO47_19450 NZ_CP075113.1 Protein Homology CDS 3958461 3959168 . + 0 ID=cds-WP_000915964.1;Parent=gene-CCO47_RS19450;Dbxref=GenBank:WP_000915964.1;Name=WP_000915964.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459111.1;locus_tag=CCO47_RS19450;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_000915964.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3959207 3959974 . - . ID=gene-CCO47_RS19455;Name=CCO47_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19455;old_locus_tag=CCO47_19455 NZ_CP075113.1 Protein Homology CDS 3959207 3959974 . - 0 ID=cds-WP_001148372.1;Parent=gene-CCO47_RS19455;Dbxref=GenBank:WP_001148372.1;Name=WP_001148372.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459110.1;locus_tag=CCO47_RS19455;product=DedA family protein;protein_id=WP_001148372.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3960093 3960938 . - . ID=gene-CCO47_RS19460;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=CCO47_RS19460;old_locus_tag=CCO47_19460 NZ_CP075113.1 Protein Homology CDS 3960093 3960938 . - 0 ID=cds-WP_000852387.1;Parent=gene-CCO47_RS19460;Dbxref=GenBank:WP_000852387.1;Name=WP_000852387.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459109.1;locus_tag=CCO47_RS19460;product=arabinose operon transcriptional regulator AraC;protein_id=WP_000852387.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3961278 3962987 . + . ID=gene-CCO47_RS19465;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=CCO47_RS19465;old_locus_tag=CCO47_19465 NZ_CP075113.1 Protein Homology CDS 3961278 3962987 . + 0 ID=cds-WP_000951811.1;Parent=gene-CCO47_RS19465;Dbxref=GenBank:WP_000951811.1;Name=WP_000951811.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459108.1;locus_tag=CCO47_RS19465;product=ribulokinase;protein_id=WP_000951811.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3962998 3964500 . + . ID=gene-CCO47_RS19470;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=CCO47_RS19470;old_locus_tag=CCO47_19470 NZ_CP075113.1 Protein Homology CDS 3962998 3964500 . + 0 ID=cds-WP_000151704.1;Parent=gene-CCO47_RS19470;Dbxref=GenBank:WP_000151704.1;Name=WP_000151704.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=CCO47_RS19470;product=L-arabinose isomerase;protein_id=WP_000151704.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3964641 3965336 . + . ID=gene-CCO47_RS19475;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=CCO47_RS19475;old_locus_tag=CCO47_19475 NZ_CP075113.1 Protein Homology CDS 3964641 3965336 . + 0 ID=cds-WP_000888705.1;Parent=gene-CCO47_RS19475;Dbxref=GenBank:WP_000888705.1;Name=WP_000888705.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459106.1;locus_tag=CCO47_RS19475;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888705.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 3965342 3965761 . - . ID=gene-CCO47_RS19480;Name=CCO47_RS19480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS19480;old_locus_tag=CCO47_19480;pseudo=true NZ_CP075113.1 Protein Homology CDS 3965342 3965761 . - 0 ID=cds-CCO47_RS19480;Parent=gene-CCO47_RS19480;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=CCO47_RS19480;product=DUF4751 family protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 3966279 3966899 . + . ID=gene-CCO47_RS19485;Name=CCO47_RS19485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19485;old_locus_tag=CCO47_19485 NZ_CP075113.1 Protein Homology CDS 3966279 3966899 . + 0 ID=cds-WP_000877512.1;Parent=gene-CCO47_RS19485;Dbxref=GenBank:WP_000877512.1;Name=WP_000877512.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=CCO47_RS19485;product=YdcF family protein;protein_id=WP_000877512.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3966943 3969294 . + . ID=gene-CCO47_RS19490;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=CCO47_RS19490;old_locus_tag=CCO47_19490 NZ_CP075113.1 Protein Homology CDS 3966943 3969294 . + 0 ID=cds-WP_000035716.1;Parent=gene-CCO47_RS19490;Dbxref=GenBank:WP_000035716.1;Name=WP_000035716.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=CCO47_RS19490;product=DNA polymerase II;protein_id=WP_000035716.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3969468 3972374 . + . ID=gene-CCO47_RS19495;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=CCO47_RS19495;old_locus_tag=CCO47_19495 NZ_CP075113.1 Protein Homology CDS 3969468 3972374 . + 0 ID=cds-WP_001116966.1;Parent=gene-CCO47_RS19495;Dbxref=GenBank:WP_001116966.1;Name=WP_001116966.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=CCO47_RS19495;product=RNA polymerase-associated protein RapA;protein_id=WP_001116966.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3972386 3973045 . + . ID=gene-CCO47_RS19500;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=CCO47_RS19500;old_locus_tag=CCO47_19500 NZ_CP075113.1 Protein Homology CDS 3972386 3973045 . + 0 ID=cds-WP_000525197.1;Parent=gene-CCO47_RS19500;Dbxref=GenBank:WP_000525197.1;Name=WP_000525197.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459100.1;locus_tag=CCO47_RS19500;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525197.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3973140 3973952 . - . ID=gene-CCO47_RS19505;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=CCO47_RS19505;old_locus_tag=CCO47_19505 NZ_CP075113.1 Protein Homology CDS 3973140 3973952 . - 0 ID=cds-WP_001200595.1;Parent=gene-CCO47_RS19505;Dbxref=GenBank:WP_001200595.1;Name=WP_001200595.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459099.1;locus_tag=CCO47_RS19505;product=co-chaperone DjlA;protein_id=WP_001200595.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3974206 3976566 . + . ID=gene-CCO47_RS19510;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=CCO47_RS19510;old_locus_tag=CCO47_19510 NZ_CP075113.1 Protein Homology CDS 3974206 3976566 . + 0 ID=cds-WP_000746117.1;Parent=gene-CCO47_RS19510;Dbxref=GenBank:WP_000746117.1;Name=WP_000746117.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=CCO47_RS19510;product=LPS assembly protein LptD;protein_id=WP_000746117.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3976620 3977906 . + . ID=gene-CCO47_RS19515;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=CCO47_RS19515;old_locus_tag=CCO47_19515 NZ_CP075113.1 Protein Homology CDS 3976620 3977906 . + 0 ID=cds-WP_000800482.1;Parent=gene-CCO47_RS19515;Dbxref=GenBank:WP_000800482.1;Name=WP_000800482.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459097.1;locus_tag=CCO47_RS19515;product=peptidylprolyl isomerase SurA;protein_id=WP_000800482.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3977906 3978895 . + . ID=gene-CCO47_RS19520;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=CCO47_RS19520;old_locus_tag=CCO47_19520 NZ_CP075113.1 Protein Homology CDS 3977906 3978895 . + 0 ID=cds-WP_000093001.1;Parent=gene-CCO47_RS19520;Dbxref=GenBank:WP_000093001.1;Name=WP_000093001.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459096.1;locus_tag=CCO47_RS19520;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_000093001.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3978892 3979713 . + . ID=gene-CCO47_RS19525;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=CCO47_RS19525;old_locus_tag=CCO47_19525 NZ_CP075113.1 Protein Homology CDS 3978892 3979713 . + 0 ID=cds-WP_001065397.1;Parent=gene-CCO47_RS19525;Dbxref=GenBank:WP_001065397.1;Name=WP_001065397.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459095.1;locus_tag=CCO47_RS19525;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065397.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3979716 3980093 . + . ID=gene-CCO47_RS19530;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=CCO47_RS19530;old_locus_tag=CCO47_19530 NZ_CP075113.1 Protein Homology CDS 3979716 3980093 . + 0 ID=cds-WP_000610894.1;Parent=gene-CCO47_RS19530;Dbxref=GenBank:WP_000610894.1;Name=WP_000610894.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=CCO47_RS19530;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610894.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3980104 3980952 . + . ID=gene-CCO47_RS19535;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=CCO47_RS19535;old_locus_tag=CCO47_19535 NZ_CP075113.1 Protein Homology CDS 3980104 3980952 . + 0 ID=cds-WP_000257211.1;Parent=gene-CCO47_RS19535;Dbxref=GenBank:WP_000257211.1;Name=WP_000257211.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459093.1;locus_tag=CCO47_RS19535;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_000257211.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3981058 3981537 . - . ID=gene-CCO47_RS19540;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=CCO47_RS19540;old_locus_tag=CCO47_19540 NZ_CP075113.1 Protein Homology CDS 3981058 3981537 . - 0 ID=cds-WP_000624379.1;Parent=gene-CCO47_RS19540;Dbxref=GenBank:WP_000624379.1;Name=WP_000624379.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=CCO47_RS19540;product=type 3 dihydrofolate reductase;protein_id=WP_000624379.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3981736 3983598 . - . ID=gene-CCO47_RS19545;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=CCO47_RS19545;old_locus_tag=CCO47_19545 NZ_CP075113.1 Protein Homology CDS 3981736 3983598 . - 0 ID=cds-WP_000377163.1;Parent=gene-CCO47_RS19545;Dbxref=GenBank:WP_000377163.1;Name=WP_000377163.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=CCO47_RS19545;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_000377163.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3983591 3984121 . - . ID=gene-CCO47_RS19550;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=CCO47_RS19550;old_locus_tag=CCO47_19550 NZ_CP075113.1 Protein Homology CDS 3983591 3984121 . - 0 ID=cds-WP_000600698.1;Parent=gene-CCO47_RS19550;Dbxref=GenBank:WP_000600698.1;Name=WP_000600698.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=CCO47_RS19550;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_000600698.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3984221 3984451 . - . ID=gene-CCO47_RS19555;Name=CCO47_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19555;old_locus_tag=CCO47_19555 NZ_CP075113.1 Protein Homology CDS 3984221 3984451 . - 0 ID=cds-WP_001172089.1;Parent=gene-CCO47_RS19555;Dbxref=GenBank:WP_001172089.1;Name=WP_001172089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459085.1;locus_tag=CCO47_RS19555;product=YgdI/YgdR family lipoprotein;protein_id=WP_001172089.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3984540 3985880 . - . ID=gene-CCO47_RS19560;Name=CCO47_RS19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19560;old_locus_tag=CCO47_19560 NZ_CP075113.1 Protein Homology CDS 3984540 3985880 . - 0 ID=cds-WP_001674927.1;Parent=gene-CCO47_RS19560;Dbxref=GenBank:WP_001674927.1;Name=WP_001674927.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746786.1;locus_tag=CCO47_RS19560;product=MFS transporter;protein_id=WP_001674927.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3986027 3986314 . - . ID=gene-CCO47_RS19565;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=CCO47_RS19565;old_locus_tag=CCO47_19565 NZ_CP075113.1 Protein Homology CDS 3986027 3986314 . - 0 ID=cds-WP_000203736.1;Parent=gene-CCO47_RS19565;Dbxref=GenBank:WP_000203736.1;Name=WP_000203736.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459083.1;locus_tag=CCO47_RS19565;product=ferredoxin-like protein FixX;protein_id=WP_000203736.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3986311 3987597 . - . ID=gene-CCO47_RS19570;Name=CCO47_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19570;old_locus_tag=CCO47_19570 NZ_CP075113.1 Protein Homology CDS 3986311 3987597 . - 0 ID=cds-WP_001287768.1;Parent=gene-CCO47_RS19570;Dbxref=GenBank:WP_001287768.1;Name=WP_001287768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459082.1;locus_tag=CCO47_RS19570;product=FAD-dependent oxidoreductase;protein_id=WP_001287768.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3987647 3988588 . - . ID=gene-CCO47_RS19575;Name=CCO47_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19575;old_locus_tag=CCO47_19575 NZ_CP075113.1 Protein Homology CDS 3987647 3988588 . - 0 ID=cds-WP_001032203.1;Parent=gene-CCO47_RS19575;Dbxref=GenBank:WP_001032203.1;Name=WP_001032203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459081.1;locus_tag=CCO47_RS19575;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001032203.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3988604 3989374 . - . ID=gene-CCO47_RS19580;Name=CCO47_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19580;old_locus_tag=CCO47_19580 NZ_CP075113.1 Protein Homology CDS 3988604 3989374 . - 0 ID=cds-WP_000692191.1;Parent=gene-CCO47_RS19580;Dbxref=GenBank:WP_000692191.1;Name=WP_000692191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459080.1;locus_tag=CCO47_RS19580;product=electron transfer flavoprotein FixA;protein_id=WP_000692191.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3989855 3991372 . + . ID=gene-CCO47_RS19585;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=CCO47_RS19585;old_locus_tag=CCO47_19585 NZ_CP075113.1 Protein Homology CDS 3989855 3991372 . + 0 ID=cds-WP_000787073.1;Parent=gene-CCO47_RS19585;Dbxref=GenBank:WP_000787073.1;Name=WP_000787073.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459079.1;locus_tag=CCO47_RS19585;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_000787073.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3991407 3992549 . + . ID=gene-CCO47_RS19590;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=CCO47_RS19590;old_locus_tag=CCO47_19590 NZ_CP075113.1 Protein Homology CDS 3991407 3992549 . + 0 ID=cds-WP_000347134.1;Parent=gene-CCO47_RS19590;Dbxref=GenBank:WP_000347134.1;Name=WP_000347134.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=CCO47_RS19590;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_000347134.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3992661 3993878 . + . ID=gene-CCO47_RS19595;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=CCO47_RS19595;old_locus_tag=CCO47_19595 NZ_CP075113.1 Protein Homology CDS 3992661 3993878 . + 0 ID=cds-WP_001016212.1;Parent=gene-CCO47_RS19595;Dbxref=GenBank:WP_001016212.1;Name=WP_001016212.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459077.1;locus_tag=CCO47_RS19595;product=L-carnitine CoA-transferase;protein_id=WP_001016212.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3993941 3995494 . + . ID=gene-CCO47_RS19600;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=CCO47_RS19600;old_locus_tag=CCO47_19600 NZ_CP075113.1 Protein Homology CDS 3993941 3995494 . + 0 ID=cds-WP_000355802.1;Parent=gene-CCO47_RS19600;Dbxref=GenBank:WP_000355802.1;Name=WP_000355802.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=CCO47_RS19600;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_000355802.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3995548 3996333 . + . ID=gene-CCO47_RS19605;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=CCO47_RS19605;old_locus_tag=CCO47_19605 NZ_CP075113.1 Protein Homology CDS 3995548 3996333 . + 0 ID=cds-WP_000004383.1;Parent=gene-CCO47_RS19605;Dbxref=GenBank:WP_000004383.1;Name=WP_000004383.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=CCO47_RS19605;product=crotonobetainyl-CoA hydratase;protein_id=WP_000004383.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3996443 3997039 . + . ID=gene-CCO47_RS19610;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=CCO47_RS19610;old_locus_tag=CCO47_19610 NZ_CP075113.1 Protein Homology CDS 3996443 3997039 . + 0 ID=cds-WP_094912447.1;Parent=gene-CCO47_RS19610;Dbxref=GenBank:WP_094912447.1;Name=WP_094912447.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459074.1;locus_tag=CCO47_RS19610;product=carnitine operon protein CaiE;protein_id=WP_094912447.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3997116 3997511 . - . ID=gene-CCO47_RS19615;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=CCO47_RS19615;old_locus_tag=CCO47_19615 NZ_CP075113.1 Protein Homology CDS 3997116 3997511 . - 0 ID=cds-WP_000333329.1;Parent=gene-CCO47_RS19615;Dbxref=GenBank:WP_000333329.1;Name=WP_000333329.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459073.1;locus_tag=CCO47_RS19615;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333329.1;transl_table=11 NZ_CP075113.1 RefSeq gene 3997785 4001012 . - . ID=gene-CCO47_RS19620;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=CCO47_RS19620;old_locus_tag=CCO47_19620 NZ_CP075113.1 Protein Homology CDS 3997785 4001012 . - 0 ID=cds-WP_001126302.1;Parent=gene-CCO47_RS19620;Dbxref=GenBank:WP_001126302.1;Name=WP_001126302.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=CCO47_RS19620;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_001126302.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4001031 4002179 . - . ID=gene-CCO47_RS19625;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=CCO47_RS19625;old_locus_tag=CCO47_19625 NZ_CP075113.1 Protein Homology CDS 4001031 4002179 . - 0 ID=cds-WP_000597284.1;Parent=gene-CCO47_RS19625;Dbxref=GenBank:WP_000597284.1;Name=WP_000597284.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=CCO47_RS19625;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_000597284.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4003043 4003864 . - . ID=gene-CCO47_RS19630;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=CCO47_RS19630;old_locus_tag=CCO47_19630 NZ_CP075113.1 Protein Homology CDS 4003043 4003864 . - 0 ID=cds-WP_000544030.1;Parent=gene-CCO47_RS19630;Dbxref=GenBank:WP_000544030.1;Name=WP_000544030.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase activity|0008839||IEA;go_process=L-lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459069.1;locus_tag=CCO47_RS19630;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_000544030.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4004044 4004952 . - . ID=gene-CCO47_RS19635;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=CCO47_RS19635;old_locus_tag=CCO47_19635 NZ_CP075113.1 Protein Homology CDS 4004044 4004952 . - 0 ID=cds-WP_001103238.1;Parent=gene-CCO47_RS19635;Dbxref=GenBank:WP_001103238.1;Name=WP_001103238.1;Ontology_term=GO:0016310,GO:0019361,GO:0005524,GO:0046917;gbkey=CDS;gene=citG;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA,2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459068.1;locus_tag=CCO47_RS19635;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_001103238.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4004930 4005481 . - . ID=gene-CCO47_RS19640;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=CCO47_RS19640;old_locus_tag=CCO47_19640 NZ_CP075113.1 Protein Homology CDS 4004930 4005481 . - 0 ID=cds-WP_000679053.1;Parent=gene-CCO47_RS19640;Dbxref=GenBank:WP_000679053.1;Name=WP_000679053.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459067.1;locus_tag=CCO47_RS19640;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_000679053.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4005481 4007001 . - . ID=gene-CCO47_RS19645;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=CCO47_RS19645;old_locus_tag=CCO47_19645 NZ_CP075113.1 Protein Homology CDS 4005481 4007001 . - 0 ID=cds-WP_000665583.1;Parent=gene-CCO47_RS19645;Dbxref=GenBank:WP_000665583.1;Name=WP_000665583.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459066.1;locus_tag=CCO47_RS19645;product=citrate lyase subunit alpha;protein_id=WP_000665583.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4007012 4007881 . - . ID=gene-CCO47_RS19650;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=CCO47_RS19650;old_locus_tag=CCO47_19650 NZ_CP075113.1 Protein Homology CDS 4007012 4007881 . - 0 ID=cds-WP_001247811.1;Parent=gene-CCO47_RS19650;Dbxref=GenBank:WP_001247811.1;Name=WP_001247811.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459065.1;locus_tag=CCO47_RS19650;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_001247811.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4007878 4008171 . - . ID=gene-CCO47_RS19655;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=CCO47_RS19655;old_locus_tag=CCO47_19655 NZ_CP075113.1 Protein Homology CDS 4007878 4008171 . - 0 ID=cds-WP_000691461.1;Parent=gene-CCO47_RS19655;Dbxref=GenBank:WP_000691461.1;Name=WP_000691461.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459064.1;locus_tag=CCO47_RS19655;product=citrate lyase acyl carrier protein;protein_id=WP_000691461.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4008201 4009244 . - . ID=gene-CCO47_RS19660;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=CCO47_RS19660;old_locus_tag=CCO47_19660 NZ_CP075113.1 Protein Homology CDS 4008201 4009244 . - 0 ID=cds-WP_001181441.1;Parent=gene-CCO47_RS19660;Dbxref=GenBank:WP_001181441.1;Name=WP_001181441.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459063.1;locus_tag=CCO47_RS19660;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_001181441.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4009489 4010829 . + . ID=gene-CCO47_RS19665;Name=citS;gbkey=Gene;gene=citS;gene_biotype=protein_coding;locus_tag=CCO47_RS19665;old_locus_tag=CCO47_19665 NZ_CP075113.1 Protein Homology CDS 4009489 4010829 . + 0 ID=cds-WP_000183596.1;Parent=gene-CCO47_RS19665;Dbxref=GenBank:WP_000183596.1;Name=WP_000183596.1;Ontology_term=GO:0006101,GO:0006814,GO:0015293,GO:0022857;gbkey=CDS;gene=citS;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=citrate metabolic process|0006101||IEA,sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459062.1;locus_tag=CCO47_RS19665;product=citrate/sodium symporter CitS;protein_id=WP_000183596.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4010988 4011227 . + . ID=gene-CCO47_RS19670;Name=CCO47_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19670;old_locus_tag=CCO47_19670 NZ_CP075113.1 Protein Homology CDS 4010988 4011227 . + 0 ID=cds-WP_001001155.1;Parent=gene-CCO47_RS19670;Dbxref=GenBank:WP_001001155.1;Name=WP_001001155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010836018.1;locus_tag=CCO47_RS19670;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_001001155.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4011243 4013015 . + . ID=gene-CCO47_RS19675;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=CCO47_RS19675;old_locus_tag=CCO47_19675 NZ_CP075113.1 Protein Homology CDS 4011243 4013015 . + 0 ID=cds-WP_000150437.1-2;Parent=gene-CCO47_RS19675;Dbxref=GenBank:WP_000150437.1;Name=WP_000150437.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=CCO47_RS19675;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_000150437.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4013028 4014329 . + . ID=gene-CCO47_RS19680;Name=CCO47_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19680;old_locus_tag=CCO47_19680 NZ_CP075113.1 Protein Homology CDS 4013028 4014329 . + 0 ID=cds-WP_000444831.1;Parent=gene-CCO47_RS19680;Dbxref=GenBank:WP_000444831.1;Name=WP_000444831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=CCO47_RS19680;product=oxalacetate decarboxylase subunit beta;protein_id=WP_000444831.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4014464 4016083 . + . ID=gene-CCO47_RS19685;Name=citA;gbkey=Gene;gene=citA;gene_biotype=protein_coding;locus_tag=CCO47_RS19685;old_locus_tag=CCO47_19685 NZ_CP075113.1 Protein Homology CDS 4014464 4016083 . + 0 ID=cds-WP_001675378.1;Parent=gene-CCO47_RS19685;Dbxref=GenBank:WP_001675378.1;Name=WP_001675378.1;gbkey=CDS;gene=citA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459058.1;locus_tag=CCO47_RS19685;product=citrate sensor histidine kinase CitA;protein_id=WP_001675378.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4016085 4016771 . + . ID=gene-CCO47_RS19690;Name=citB;gbkey=Gene;gene=citB;gene_biotype=protein_coding;locus_tag=CCO47_RS19690;old_locus_tag=CCO47_19690 NZ_CP075113.1 Protein Homology CDS 4016085 4016771 . + 0 ID=cds-WP_000377406.1;Parent=gene-CCO47_RS19690;Dbxref=GenBank:WP_000377406.1;Name=WP_000377406.1;gbkey=CDS;gene=citB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459057.1;locus_tag=CCO47_RS19690;product=citrate response regulator transcription factor CitB;protein_id=WP_000377406.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4016793 4017713 . - . ID=gene-CCO47_RS19695;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=CCO47_RS19695;old_locus_tag=CCO47_19695 NZ_CP075113.1 Protein Homology CDS 4016793 4017713 . - 0 ID=cds-WP_000127283.1;Parent=gene-CCO47_RS19695;Dbxref=GenBank:WP_000127283.1;Name=WP_000127283.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459056.1;locus_tag=CCO47_RS19695;product=ribonucleoside hydrolase RihC;protein_id=WP_000127283.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4017729 4018931 . - . ID=gene-CCO47_RS19700;Name=CCO47_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19700;old_locus_tag=CCO47_19700 NZ_CP075113.1 Protein Homology CDS 4017729 4018931 . - 0 ID=cds-WP_000516326.1;Parent=gene-CCO47_RS19700;Dbxref=GenBank:WP_000516326.1;Name=WP_000516326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459055.1;locus_tag=CCO47_RS19700;product=XAC2610-related protein;protein_id=WP_000516326.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4019131 4020081 . - . ID=gene-CCO47_RS19705;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=CCO47_RS19705;old_locus_tag=CCO47_19705 NZ_CP075113.1 Protein Homology CDS 4019131 4020081 . - 0 ID=cds-WP_001166428.1;Parent=gene-CCO47_RS19705;Dbxref=GenBank:WP_001166428.1;Name=WP_001166428.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=CCO47_RS19705;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166428.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4020084 4020533 . - . ID=gene-CCO47_RS19710;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=CCO47_RS19710;old_locus_tag=CCO47_19710 NZ_CP075113.1 Protein Homology CDS 4020084 4020533 . - 0 ID=cds-WP_000047274.1;Parent=gene-CCO47_RS19710;Dbxref=GenBank:WP_000047274.1;Name=WP_000047274.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459053.1;locus_tag=CCO47_RS19710;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000047274.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4020688 4021188 . - . ID=gene-CCO47_RS19715;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=CCO47_RS19715;old_locus_tag=CCO47_19715 NZ_CP075113.1 Protein Homology CDS 4020688 4021188 . - 0 ID=cds-WP_000042736.1;Parent=gene-CCO47_RS19715;Dbxref=GenBank:WP_000042736.1;Name=WP_000042736.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=CCO47_RS19715;product=signal peptidase II;protein_id=WP_000042736.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4021188 4024022 . - . ID=gene-CCO47_RS19720;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=CCO47_RS19720;old_locus_tag=CCO47_19720 NZ_CP075113.1 Protein Homology CDS 4021188 4024022 . - 0 ID=cds-WP_001674865.1;Parent=gene-CCO47_RS19720;Dbxref=GenBank:WP_001674865.1;Name=WP_001674865.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459051.1;locus_tag=CCO47_RS19720;product=isoleucine--tRNA ligase;protein_id=WP_001674865.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4024067 4025005 . - . ID=gene-CCO47_RS19725;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=CCO47_RS19725;old_locus_tag=CCO47_19725 NZ_CP075113.1 Protein Homology CDS 4024067 4025005 . - 0 ID=cds-WP_000767318.1;Parent=gene-CCO47_RS19725;Dbxref=GenBank:WP_000767318.1;Name=WP_000767318.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459050.1;locus_tag=CCO47_RS19725;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767318.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4025013 4025228 . - . ID=gene-CCO47_RS19730;Name=CCO47_RS19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19730;old_locus_tag=CCO47_19730 NZ_CP075113.1 Protein Homology CDS 4025013 4025228 . - 0 ID=cds-WP_001575565.1;Parent=gene-CCO47_RS19730;Dbxref=GenBank:WP_001575565.1;Name=WP_001575565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459049.1;locus_tag=CCO47_RS19730;product=YaaY family protein;protein_id=WP_001575565.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4025334 4025597 . + . ID=gene-CCO47_RS19735;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=CCO47_RS19735;old_locus_tag=CCO47_19735 NZ_CP075113.1 Protein Homology CDS 4025334 4025597 . + 0 ID=cds-WP_001518655.1;Parent=gene-CCO47_RS19735;Dbxref=GenBank:WP_001518655.1;Name=WP_001518655.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=CCO47_RS19735;product=30S ribosomal protein S20;protein_id=WP_001518655.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4026053 4027438 . + . ID=gene-CCO47_RS19740;Name=CCO47_RS19740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS19740;old_locus_tag=CCO47_19740;pseudo=true NZ_CP075113.1 Protein Homology CDS 4026053 4027438 . + 0 ID=cds-CCO47_RS19740;Parent=gene-CCO47_RS19740;Note=internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=CCO47_RS19740;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 4027478 4029517 . + . ID=gene-CCO47_RS19745;Name=CCO47_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19745;old_locus_tag=CCO47_19745 NZ_CP075113.1 Protein Homology CDS 4027478 4029517 . + 0 ID=cds-WP_001116453.1;Parent=gene-CCO47_RS19745;Dbxref=GenBank:WP_001116453.1;Name=WP_001116453.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459046.1;locus_tag=CCO47_RS19745;product=glycoside hydrolase family 31 protein;protein_id=WP_001116453.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4029572 4030471 . - . ID=gene-CCO47_RS19750;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=CCO47_RS19750;old_locus_tag=CCO47_19750 NZ_CP075113.1 Protein Homology CDS 4029572 4030471 . - 0 ID=cds-WP_000062872.1;Parent=gene-CCO47_RS19750;Dbxref=GenBank:WP_000062872.1;Name=WP_000062872.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459045.1;locus_tag=CCO47_RS19750;product=transcriptional activator NhaR;protein_id=WP_000062872.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4030533 4031699 . - . ID=gene-CCO47_RS19755;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=CCO47_RS19755;old_locus_tag=CCO47_19755 NZ_CP075113.1 Protein Homology CDS 4030533 4031699 . - 0 ID=cds-WP_000681340.1;Parent=gene-CCO47_RS19755;Dbxref=GenBank:WP_000681340.1;Name=WP_000681340.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459044.1;locus_tag=CCO47_RS19755;product=Na+/H+ antiporter NhaA;protein_id=WP_000681340.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4031862 4033577 . - . ID=gene-CCO47_RS19760;Name=CCO47_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19760;old_locus_tag=CCO47_19760 NZ_CP075113.1 Protein Homology CDS 4031862 4033577 . - 0 ID=cds-WP_001094889.1;Parent=gene-CCO47_RS19760;Dbxref=GenBank:WP_001094889.1;Name=WP_001094889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459043.1;locus_tag=CCO47_RS19760;product=aryl-sulfate sulfotransferase;protein_id=WP_001094889.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4033704 4034957 . - . ID=gene-CCO47_RS19765;Name=CCO47_RS19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19765;old_locus_tag=CCO47_19765 NZ_CP075113.1 Protein Homology CDS 4033704 4034957 . - 0 ID=cds-WP_001055836.1;Parent=gene-CCO47_RS19765;Dbxref=GenBank:WP_001055836.1;Name=WP_001055836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459042.1;locus_tag=CCO47_RS19765;product=IS1/IS1595 family N-terminal zinc-binding domain-containing protein;protein_id=WP_001055836.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4034976 4036166 . - . ID=gene-CCO47_RS19770;Name=CCO47_RS19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19770;old_locus_tag=CCO47_19770 NZ_CP075113.1 Protein Homology CDS 4034976 4036166 . - 0 ID=cds-WP_000971148.1;Parent=gene-CCO47_RS19770;Dbxref=GenBank:WP_000971148.1;Name=WP_000971148.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459041.1;locus_tag=CCO47_RS19770;product=anaerobic sulfatase maturase;protein_id=WP_000971148.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4036265 4037758 . - . ID=gene-CCO47_RS19775;Name=CCO47_RS19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19775;old_locus_tag=CCO47_19775 NZ_CP075113.1 Protein Homology CDS 4036265 4037758 . - 0 ID=cds-WP_000831881.1;Parent=gene-CCO47_RS19775;Dbxref=GenBank:WP_000831881.1;Name=WP_000831881.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459040.1;locus_tag=CCO47_RS19775;product=sulfatase family protein;protein_id=WP_000831881.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4038352 4039113 . + . ID=gene-CCO47_RS19780;Name=CCO47_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19780;old_locus_tag=CCO47_19780 NZ_CP075113.1 Protein Homology CDS 4038352 4039113 . + 0 ID=cds-WP_000791534.1;Parent=gene-CCO47_RS19780;Dbxref=GenBank:WP_000791534.1;Name=WP_000791534.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459039.1;locus_tag=CCO47_RS19780;product=outer membrane protein OmpK;protein_id=WP_000791534.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4039212 4040783 . + . ID=gene-CCO47_RS19785;Name=CCO47_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19785;old_locus_tag=CCO47_19785 NZ_CP075113.1 Protein Homology CDS 4039212 4040783 . + 0 ID=cds-WP_000262869.1;Parent=gene-CCO47_RS19785;Dbxref=GenBank:WP_000262869.1;Name=WP_000262869.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459038.1;locus_tag=CCO47_RS19785;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_000262869.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4040829 4042547 . - . ID=gene-CCO47_RS19790;Name=CCO47_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19790;old_locus_tag=CCO47_19790 NZ_CP075113.1 Protein Homology CDS 4040829 4042547 . - 0 ID=cds-WP_001036511.1;Parent=gene-CCO47_RS19790;Dbxref=GenBank:WP_001036511.1;Name=WP_001036511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459037.1;locus_tag=CCO47_RS19790;product=aryl-sulfate sulfotransferase;protein_id=WP_001036511.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4043070 4043510 . + . ID=gene-CCO47_RS19795;Name=CCO47_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19795;old_locus_tag=CCO47_19795 NZ_CP075113.1 Protein Homology CDS 4043070 4043510 . + 0 ID=cds-WP_000158346.1;Parent=gene-CCO47_RS19795;Dbxref=GenBank:WP_000158346.1;Name=WP_000158346.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459036.1;locus_tag=CCO47_RS19795;product=winged helix-turn-helix domain-containing protein;protein_id=WP_000158346.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4043518 4044522 . - . ID=gene-CCO47_RS19800;Name=CCO47_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19800;old_locus_tag=CCO47_19800 NZ_CP075113.1 Protein Homology CDS 4043518 4044522 . - 0 ID=cds-WP_001247392.1;Parent=gene-CCO47_RS19800;Dbxref=GenBank:WP_001247392.1;Name=WP_001247392.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459035.1;locus_tag=CCO47_RS19800;product=LysR family transcriptional regulator;protein_id=WP_001247392.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4044892 4045341 . + . ID=gene-CCO47_RS19805;Name=CCO47_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19805;old_locus_tag=CCO47_19805 NZ_CP075113.1 Protein Homology CDS 4044892 4045341 . + 0 ID=cds-WP_001250363.1;Parent=gene-CCO47_RS19805;Dbxref=GenBank:WP_001250363.1;Name=WP_001250363.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459034.1;locus_tag=CCO47_RS19805;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001250363.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4045441 4045728 . - . ID=gene-CCO47_RS19810;Name=CCO47_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19810;old_locus_tag=CCO47_19810 NZ_CP075113.1 Protein Homology CDS 4045441 4045728 . - 0 ID=cds-WP_000839833.1;Parent=gene-CCO47_RS19810;Dbxref=GenBank:WP_000839833.1;Name=WP_000839833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000839835.1;locus_tag=CCO47_RS19810;product=hypothetical protein;protein_id=WP_000839833.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4045767 4046612 . - . ID=gene-CCO47_RS19815;Name=CCO47_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19815;old_locus_tag=CCO47_19815 NZ_CP075113.1 Protein Homology CDS 4045767 4046612 . - 0 ID=cds-WP_000291392.1;Parent=gene-CCO47_RS19815;Dbxref=GenBank:WP_000291392.1;Name=WP_000291392.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459033.1;locus_tag=CCO47_RS19815;product=DsbA family protein;protein_id=WP_000291392.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4046676 4047407 . - . ID=gene-CCO47_RS19820;Name=bcfG;gbkey=Gene;gene=bcfG;gene_biotype=protein_coding;locus_tag=CCO47_RS19820;old_locus_tag=CCO47_19820 NZ_CP075113.1 Protein Homology CDS 4046676 4047407 . - 0 ID=cds-WP_001135047.1;Parent=gene-CCO47_RS19820;Dbxref=GenBank:WP_001135047.1;Name=WP_001135047.1;gbkey=CDS;gene=bcfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=CCO47_RS19820;product=fimbrial chaperone BcfG;protein_id=WP_001135047.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4047373 4047891 . - . ID=gene-CCO47_RS19825;Name=CCO47_RS19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19825;old_locus_tag=CCO47_19825 NZ_CP075113.1 Protein Homology CDS 4047373 4047891 . - 0 ID=cds-WP_094912378.1;Parent=gene-CCO47_RS19825;Dbxref=GenBank:WP_094912378.1;Name=WP_094912378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459031.1;locus_tag=CCO47_RS19825;product=fimbrial protein BcfF;protein_id=WP_094912378.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4047907 4048452 . - . ID=gene-CCO47_RS19830;Name=CCO47_RS19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19830;old_locus_tag=CCO47_19830 NZ_CP075113.1 Protein Homology CDS 4047907 4048452 . - 0 ID=cds-WP_001082038.1;Parent=gene-CCO47_RS19830;Dbxref=GenBank:WP_001082038.1;Name=WP_001082038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459030.1;locus_tag=CCO47_RS19830;product=fimbrial protein BcfE;protein_id=WP_001082038.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4048453 4049460 . - . ID=gene-CCO47_RS19835;Name=CCO47_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19835;old_locus_tag=CCO47_19835 NZ_CP075113.1 Protein Homology CDS 4048453 4049460 . - 0 ID=cds-WP_000701234.1;Parent=gene-CCO47_RS19835;Dbxref=GenBank:WP_000701234.1;Name=WP_000701234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459029.1;locus_tag=CCO47_RS19835;product=fimbrial protein BcfD;protein_id=WP_000701234.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4049461 4052082 . - . ID=gene-CCO47_RS19840;Name=bcfC;gbkey=Gene;gene=bcfC;gene_biotype=protein_coding;locus_tag=CCO47_RS19840;old_locus_tag=CCO47_19840 NZ_CP075113.1 Protein Homology CDS 4049461 4052082 . - 0 ID=cds-WP_001245857.1;Parent=gene-CCO47_RS19840;Dbxref=GenBank:WP_001245857.1;Name=WP_001245857.1;gbkey=CDS;gene=bcfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=CCO47_RS19840;product=fimbrial usher BcfC;protein_id=WP_001245857.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4052087 4052773 . - . ID=gene-CCO47_RS19845;Name=bcfB;gbkey=Gene;gene=bcfB;gene_biotype=protein_coding;locus_tag=CCO47_RS19845;old_locus_tag=CCO47_19845 NZ_CP075113.1 Protein Homology CDS 4052087 4052773 . - 0 ID=cds-WP_000742558.1;Parent=gene-CCO47_RS19845;Dbxref=GenBank:WP_000742558.1;Name=WP_000742558.1;gbkey=CDS;gene=bcfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459027.1;locus_tag=CCO47_RS19845;product=fimbrial biogenesis chaperone BcfB;protein_id=WP_000742558.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4052874 4053416 . - . ID=gene-CCO47_RS19850;Name=CCO47_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19850;old_locus_tag=CCO47_19850 NZ_CP075113.1 Protein Homology CDS 4052874 4053416 . - 0 ID=cds-WP_000743357.1;Parent=gene-CCO47_RS19850;Dbxref=GenBank:WP_000743357.1;Name=WP_000743357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459026.1;locus_tag=CCO47_RS19850;product=fimbrial protein BcfA;protein_id=WP_000743357.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4053846 4054550 . - . ID=gene-CCO47_RS19855;Name=CCO47_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19855;old_locus_tag=CCO47_19855 NZ_CP075113.1 Protein Homology CDS 4053846 4054550 . - 0 ID=cds-WP_000738617.1;Parent=gene-CCO47_RS19855;Dbxref=GenBank:WP_000738617.1;Name=WP_000738617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459025.1;locus_tag=CCO47_RS19855;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000738617.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4054831 4057827 . - . ID=gene-CCO47_RS19860;Name=CCO47_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19860;old_locus_tag=CCO47_19860 NZ_CP075113.1 Protein Homology CDS 4054831 4057827 . - 0 ID=cds-WP_000155795.1;Parent=gene-CCO47_RS19860;Dbxref=GenBank:WP_000155795.1;Name=WP_000155795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=CCO47_RS19860;product=hypothetical protein;protein_id=WP_000155795.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4057919 4060018 . - . ID=gene-CCO47_RS19865;Name=CCO47_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19865;old_locus_tag=CCO47_19865 NZ_CP075113.1 Protein Homology CDS 4057919 4060018 . - 0 ID=cds-WP_000235796.1;Parent=gene-CCO47_RS19865;Dbxref=GenBank:WP_000235796.1;Name=WP_000235796.1;Ontology_term=GO:0005975,GO:0004568,GO:0008061;gbkey=CDS;go_function=chitinase activity|0004568||IEA,chitin binding|0008061||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459023.1;locus_tag=CCO47_RS19865;product=glycoside hydrolase family 18 protein;protein_id=WP_000235796.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4060399 4060842 . + . ID=gene-CCO47_RS19870;Name=CCO47_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19870;old_locus_tag=CCO47_19870 NZ_CP075113.1 Protein Homology CDS 4060399 4060842 . + 0 ID=cds-WP_000860681.1;Parent=gene-CCO47_RS19870;Dbxref=GenBank:WP_000860681.1;Name=WP_000860681.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459022.1;locus_tag=CCO47_RS19870;product=winged helix-turn-helix domain-containing protein;protein_id=WP_000860681.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4060859 4061392 . + . ID=gene-CCO47_RS19875;Name=CCO47_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19875;old_locus_tag=CCO47_19875 NZ_CP075113.1 Protein Homology CDS 4060859 4061392 . + 0 ID=cds-WP_001068132.1;Parent=gene-CCO47_RS19875;Dbxref=GenBank:WP_001068132.1;Name=WP_001068132.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=CCO47_RS19875;product=glycoside hydrolase family 108 protein;protein_id=WP_001068132.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4061453 4061797 . - . ID=gene-CCO47_RS19880;Name=CCO47_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19880;old_locus_tag=CCO47_19880 NZ_CP075113.1 Protein Homology CDS 4061453 4061797 . - 0 ID=cds-WP_000026889.1;Parent=gene-CCO47_RS19880;Dbxref=GenBank:WP_000026889.1;Name=WP_000026889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459020.1;locus_tag=CCO47_RS19880;product=phage holin family protein;protein_id=WP_000026889.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4061924 4062871 . - . ID=gene-CCO47_RS19885;Name=CCO47_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19885;old_locus_tag=CCO47_19885 NZ_CP075113.1 Protein Homology CDS 4061924 4062871 . - 0 ID=cds-WP_000534911.1;Parent=gene-CCO47_RS19885;Dbxref=GenBank:WP_000534911.1;Name=WP_000534911.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459019.1;locus_tag=CCO47_RS19885;product=LysR family transcriptional regulator;protein_id=WP_000534911.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4063152 4064291 . - . ID=gene-CCO47_RS19890;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=CCO47_RS19890;old_locus_tag=CCO47_19890 NZ_CP075113.1 Protein Homology CDS 4063152 4064291 . - 0 ID=cds-WP_001119009.1;Parent=gene-CCO47_RS19890;Dbxref=GenBank:WP_001119009.1;Name=WP_001119009.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459018.1;locus_tag=CCO47_RS19890;product=molecular chaperone DnaJ;protein_id=WP_001119009.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4064377 4066293 . - . ID=gene-CCO47_RS19895;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=CCO47_RS19895;old_locus_tag=CCO47_19895 NZ_CP075113.1 Protein Homology CDS 4064377 4066293 . - 0 ID=cds-WP_000516125.1;Parent=gene-CCO47_RS19895;Dbxref=GenBank:WP_000516125.1;Name=WP_000516125.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=CCO47_RS19895;product=molecular chaperone DnaK;protein_id=WP_000516125.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4066642 4067046 . + . ID=gene-CCO47_RS19900;Name=CCO47_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19900;old_locus_tag=CCO47_19900 NZ_CP075113.1 Protein Homology CDS 4066642 4067046 . + 0 ID=cds-WP_001258084.1;Parent=gene-CCO47_RS19900;Dbxref=GenBank:WP_001258084.1;Name=WP_001258084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459016.1;locus_tag=CCO47_RS19900;product=DUF2541 family protein;protein_id=WP_001258084.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4067082 4067795 . + . ID=gene-CCO47_RS19905;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=CCO47_RS19905;old_locus_tag=CCO47_19905 NZ_CP075113.1 Protein Homology CDS 4067082 4067795 . + 0 ID=cds-WP_001103477.1;Parent=gene-CCO47_RS19905;Dbxref=GenBank:WP_001103477.1;Name=WP_001103477.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459015.1;locus_tag=CCO47_RS19905;product=acidic protein MsyB;protein_id=WP_001103477.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4067945 4068511 . + . ID=gene-CCO47_RS19910;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=CCO47_RS19910;old_locus_tag=CCO47_19910 NZ_CP075113.1 Protein Homology CDS 4067945 4068511 . + 0 ID=cds-WP_000528525.1;Parent=gene-CCO47_RS19910;Dbxref=GenBank:WP_000528525.1;Name=WP_000528525.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459014.1;locus_tag=CCO47_RS19910;product=acetate uptake transporter;protein_id=WP_000528525.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4068568 4069158 . - . ID=gene-CCO47_RS19915;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=CCO47_RS19915;old_locus_tag=CCO47_19915 NZ_CP075113.1 Protein Homology CDS 4068568 4069158 . - 0 ID=cds-WP_000380373.1;Parent=gene-CCO47_RS19915;Dbxref=GenBank:WP_000380373.1;Name=WP_000380373.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380375.1;locus_tag=CCO47_RS19915;product=molybdopterin adenylyltransferase;protein_id=WP_000380373.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4069269 4070222 . - . ID=gene-CCO47_RS19920;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=CCO47_RS19920;old_locus_tag=CCO47_19920 NZ_CP075113.1 Protein Homology CDS 4069269 4070222 . - 0 ID=cds-WP_000130175.1;Parent=gene-CCO47_RS19920;Dbxref=GenBank:WP_000130175.1;Name=WP_000130175.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459012.1;locus_tag=CCO47_RS19920;product=transaldolase;protein_id=WP_000130175.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4070491 4071921 . + . ID=gene-CCO47_RS19925;Name=CCO47_RS19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19925;old_locus_tag=CCO47_19925 NZ_CP075113.1 Protein Homology CDS 4070491 4071921 . + 0 ID=cds-WP_001113807.1;Parent=gene-CCO47_RS19925;Dbxref=GenBank:WP_001113807.1;Name=WP_001113807.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459011.1;locus_tag=CCO47_RS19925;product=alanine/glycine:cation symporter family protein;protein_id=WP_001113807.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4072000 4072773 . + . ID=gene-CCO47_RS19930;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=CCO47_RS19930;old_locus_tag=CCO47_19930 NZ_CP075113.1 Protein Homology CDS 4072000 4072773 . + 0 ID=cds-WP_000906175.1;Parent=gene-CCO47_RS19930;Dbxref=GenBank:WP_000906175.1;Name=WP_000906175.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459010.1;locus_tag=CCO47_RS19930;product=peroxide stress protein YaaA;protein_id=WP_000906175.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4072867 4074153 . - . ID=gene-CCO47_RS19935;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=CCO47_RS19935;old_locus_tag=CCO47_19935 NZ_CP075113.1 Protein Homology CDS 4072867 4074153 . - 0 ID=cds-WP_000781099.1;Parent=gene-CCO47_RS19935;Dbxref=GenBank:WP_000781099.1;Name=WP_000781099.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=CCO47_RS19935;product=threonine synthase;protein_id=WP_000781099.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4074157 4075086 . - . ID=gene-CCO47_RS19940;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=CCO47_RS19940;old_locus_tag=CCO47_19940 NZ_CP075113.1 Protein Homology CDS 4074157 4075086 . - 0 ID=cds-WP_000241691.1;Parent=gene-CCO47_RS19940;Dbxref=GenBank:WP_000241691.1;Name=WP_000241691.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459008.1;locus_tag=CCO47_RS19940;product=homoserine kinase;protein_id=WP_000241691.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4075088 4077550 . - . ID=gene-CCO47_RS19945;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=CCO47_RS19945;old_locus_tag=CCO47_19945 NZ_CP075113.1 Protein Homology CDS 4075088 4077550 . - 0 ID=cds-WP_001264674.1;Parent=gene-CCO47_RS19945;Dbxref=GenBank:WP_001264674.1;Name=WP_001264674.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=CCO47_RS19945;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_001264674.1;transl_table=11 NZ_CP075113.1 cmsearch sequence_feature 4077576 4077696 . - . ID=id-NZ_CP075113.1:4077576..4077696;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_CP075113.1 RefSeq gene 4077632 4077697 . - . ID=gene-CCO47_RS19950;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=CCO47_RS19950;old_locus_tag=CCO47_19950 NZ_CP075113.1 Protein Homology CDS 4077632 4077697 . - 0 ID=cds-WP_001575544.1;Parent=gene-CCO47_RS19950;Dbxref=GenBank:WP_001575544.1;Name=WP_001575544.1;gbkey=CDS;gene=thrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459006.1;locus_tag=CCO47_RS19950;product=thr operon leader peptide;protein_id=WP_001575544.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4077911 4078597 . - . ID=gene-CCO47_RS19955;Name=CCO47_RS19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19955;old_locus_tag=CCO47_19955 NZ_CP075113.1 Protein Homology CDS 4077911 4078597 . - 0 ID=cds-WP_001266779.1;Parent=gene-CCO47_RS19955;Dbxref=GenBank:WP_001266779.1;Name=WP_001266779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463456.1;locus_tag=CCO47_RS19955;product=tRNA/rRNA methyltransferase;protein_id=WP_001266779.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4078997 4079137 . - . ID=gene-CCO47_RS19960;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=CCO47_RS19960;old_locus_tag=CCO47_19960 NZ_CP075113.1 Protein Homology CDS 4078997 4079137 . - 0 ID=cds-WP_001541509.1;Parent=gene-CCO47_RS19960;Dbxref=GenBank:WP_001541509.1;Name=WP_001541509.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=CCO47_RS19960;product=YjjY family protein;protein_id=WP_001541509.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4079233 4079949 . + . ID=gene-CCO47_RS19965;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=CCO47_RS19965;old_locus_tag=CCO47_19965 NZ_CP075113.1 Protein Homology CDS 4079233 4079949 . + 0 ID=cds-WP_001194359.1;Parent=gene-CCO47_RS19965;Dbxref=GenBank:WP_001194359.1;Name=WP_001194359.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=CCO47_RS19965;product=two-component system response regulator ArcA;protein_id=WP_001194359.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4080216 4080530 . + . ID=gene-CCO47_RS19970;Name=CCO47_RS19970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19970;old_locus_tag=CCO47_19970 NZ_CP075113.1 Protein Homology CDS 4080216 4080530 . + 0 ID=cds-WP_000749515.1;Parent=gene-CCO47_RS19970;Dbxref=GenBank:WP_000749515.1;Name=WP_000749515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=CCO47_RS19970;product=YmdA family protein;protein_id=WP_000749515.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4080915 4081586 . + . ID=gene-CCO47_RS19975;Name=CCO47_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19975;old_locus_tag=CCO47_19975 NZ_CP075113.1 Protein Homology CDS 4080915 4081586 . + 0 ID=cds-WP_000811635.1;Parent=gene-CCO47_RS19975;Dbxref=GenBank:WP_000811635.1;Name=WP_000811635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463452.1;locus_tag=CCO47_RS19975;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000811635.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4081925 4082470 . + . ID=gene-CCO47_RS19980;Name=CCO47_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19980;old_locus_tag=CCO47_19980 NZ_CP075113.1 Protein Homology CDS 4081925 4082470 . + 0 ID=cds-WP_000482239.1;Parent=gene-CCO47_RS19980;Dbxref=GenBank:WP_000482239.1;Name=WP_000482239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=CCO47_RS19980;product=fimbrial protein;protein_id=WP_000482239.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4082541 4083224 . + . ID=gene-CCO47_RS19985;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=CCO47_RS19985;old_locus_tag=CCO47_19985 NZ_CP075113.1 Protein Homology CDS 4082541 4083224 . + 0 ID=cds-WP_000680512.1;Parent=gene-CCO47_RS19985;Dbxref=GenBank:WP_000680512.1;Name=WP_000680512.1;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463450.1;locus_tag=CCO47_RS19985;product=fimbrial biogenesis chaperone SthA;protein_id=WP_000680512.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4083270 4085807 . + . ID=gene-CCO47_RS19990;Name=CCO47_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19990;old_locus_tag=CCO47_19990 NZ_CP075113.1 Protein Homology CDS 4083270 4085807 . + 0 ID=cds-WP_001160704.1;Parent=gene-CCO47_RS19990;Dbxref=GenBank:WP_001160704.1;Name=WP_001160704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=CCO47_RS19990;product=fimbrial outer membrane usher protein;protein_id=WP_001160704.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4085825 4086382 . + . ID=gene-CCO47_RS19995;Name=CCO47_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS19995;old_locus_tag=CCO47_19995 NZ_CP075113.1 Protein Homology CDS 4085825 4086382 . + 0 ID=cds-WP_001056984.1;Parent=gene-CCO47_RS19995;Dbxref=GenBank:WP_001056984.1;Name=WP_001056984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463448.1;locus_tag=CCO47_RS19995;product=fimbrial protein;protein_id=WP_001056984.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4086423 4087508 . + . ID=gene-CCO47_RS20000;Name=sthE;gbkey=Gene;gene=sthE;gene_biotype=protein_coding;locus_tag=CCO47_RS20000;old_locus_tag=CCO47_20000 NZ_CP075113.1 Protein Homology CDS 4086423 4087508 . + 0 ID=cds-WP_001253763.1;Parent=gene-CCO47_RS20000;Dbxref=GenBank:WP_001253763.1;Name=WP_001253763.1;gbkey=CDS;gene=sthE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=CCO47_RS20000;product=fimbrial major subunit SthE;protein_id=WP_001253763.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4087566 4088904 . - . ID=gene-CCO47_RS20005;Name=creD;gbkey=Gene;gene=creD;gene_biotype=pseudogene;locus_tag=CCO47_RS20005;old_locus_tag=CCO47_20005;pseudo=true NZ_CP075113.1 Protein Homology CDS 4087566 4088904 . - 0 ID=cds-CCO47_RS20005;Parent=gene-CCO47_RS20005;Note=frameshifted;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463446.1;locus_tag=CCO47_RS20005;product=cell envelope integrity protein CreD;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 4088962 4090386 . - . ID=gene-CCO47_RS20010;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=CCO47_RS20010;old_locus_tag=CCO47_20010 NZ_CP075113.1 Protein Homology CDS 4088962 4090386 . - 0 ID=cds-WP_001219531.1;Parent=gene-CCO47_RS20010;Dbxref=GenBank:WP_001219531.1;Name=WP_001219531.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463445.1;locus_tag=CCO47_RS20010;product=two-component system sensor histidine kinase CreC;protein_id=WP_001219531.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4090386 4091075 . - . ID=gene-CCO47_RS20015;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=CCO47_RS20015;old_locus_tag=CCO47_20015 NZ_CP075113.1 Protein Homology CDS 4090386 4091075 . - 0 ID=cds-WP_001187038.1;Parent=gene-CCO47_RS20015;Dbxref=GenBank:WP_001187038.1;Name=WP_001187038.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463444.1;locus_tag=CCO47_RS20015;product=two-component system response regulator CreB;protein_id=WP_001187038.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4091088 4091561 . - . ID=gene-CCO47_RS20020;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=CCO47_RS20020;old_locus_tag=CCO47_20020 NZ_CP075113.1 Protein Homology CDS 4091088 4091561 . - 0 ID=cds-WP_000875811.1;Parent=gene-CCO47_RS20020;Dbxref=GenBank:WP_000875811.1;Name=WP_000875811.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463443.1;locus_tag=CCO47_RS20020;product=protein CreA;protein_id=WP_000875811.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4091773 4092642 . + . ID=gene-CCO47_RS20025;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=CCO47_RS20025;old_locus_tag=CCO47_20025 NZ_CP075113.1 Protein Homology CDS 4091773 4092642 . + 0 ID=cds-WP_000371685.1;Parent=gene-CCO47_RS20025;Dbxref=GenBank:WP_000371685.1;Name=WP_000371685.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463442.1;locus_tag=CCO47_RS20025;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371685.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4092639 4093286 . - . ID=gene-CCO47_RS20030;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=CCO47_RS20030;old_locus_tag=CCO47_20030 NZ_CP075113.1 Protein Homology CDS 4092639 4093286 . - 0 ID=cds-WP_000942363.1;Parent=gene-CCO47_RS20030;Dbxref=GenBank:WP_000942363.1;Name=WP_000942363.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=CCO47_RS20030;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942363.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4093335 4093850 . + . ID=gene-CCO47_RS20035;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=CCO47_RS20035;old_locus_tag=CCO47_20035 NZ_CP075113.1 Protein Homology CDS 4093335 4093850 . + 0 ID=cds-WP_000554310.1;Parent=gene-CCO47_RS20035;Dbxref=GenBank:WP_000554310.1;Name=WP_000554310.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=CCO47_RS20035;product=inosine/xanthosine triphosphatase;protein_id=WP_000554310.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4093952 4094278 . - . ID=gene-CCO47_RS20040;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=CCO47_RS20040;old_locus_tag=CCO47_20040 NZ_CP075113.1 Protein Homology CDS 4093952 4094278 . - 0 ID=cds-WP_000192003.1;Parent=gene-CCO47_RS20040;Dbxref=GenBank:WP_000192003.1;Name=WP_000192003.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463439.1;locus_tag=CCO47_RS20040;product=trp operon repressor;protein_id=WP_000192003.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4094336 4096273 . - . ID=gene-CCO47_RS20045;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=CCO47_RS20045;old_locus_tag=CCO47_20045 NZ_CP075113.1 Protein Homology CDS 4094336 4096273 . - 0 ID=cds-WP_000373275.1;Parent=gene-CCO47_RS20045;Dbxref=GenBank:WP_000373275.1;Name=WP_000373275.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155637.1;locus_tag=CCO47_RS20045;product=murein transglycosylase;protein_id=WP_000373275.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4096482 4098149 . + . ID=gene-CCO47_RS20050;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=CCO47_RS20050;old_locus_tag=CCO47_20050 NZ_CP075113.1 Protein Homology CDS 4096482 4098149 . + 0 ID=cds-WP_000046770.1;Parent=gene-CCO47_RS20050;Dbxref=GenBank:WP_000046770.1;Name=WP_000046770.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=CCO47_RS20050;product=energy-dependent translational throttle protein EttA;protein_id=WP_000046770.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4098267 4099499 . - . ID=gene-CCO47_RS20055;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=CCO47_RS20055;old_locus_tag=CCO47_20055 NZ_CP075113.1 Protein Homology CDS 4098267 4099499 . - 0 ID=cds-WP_001519486.1;Parent=gene-CCO47_RS20055;Dbxref=GenBank:WP_001519486.1;Name=WP_001519486.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=CCO47_RS20055;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_001519486.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4099650 4101032 . - . ID=gene-CCO47_RS20060;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=CCO47_RS20060;old_locus_tag=CCO47_20060 NZ_CP075113.1 Protein Homology CDS 4099650 4101032 . - 0 ID=cds-WP_001029720.1;Parent=gene-CCO47_RS20060;Dbxref=GenBank:WP_001029720.1;Name=WP_001029720.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=CCO47_RS20060;product=DNA repair protein RadA;protein_id=WP_001029720.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4101116 4102084 . - . ID=gene-CCO47_RS20065;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=CCO47_RS20065;old_locus_tag=CCO47_20065 NZ_CP075113.1 Protein Homology CDS 4101116 4102084 . - 0 ID=cds-WP_001132983.1;Parent=gene-CCO47_RS20065;Dbxref=GenBank:WP_001132983.1;Name=WP_001132983.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463434.1;locus_tag=CCO47_RS20065;product=phosphoserine phosphatase;protein_id=WP_001132983.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4102201 4102845 . + . ID=gene-CCO47_RS20070;Name=CCO47_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20070;old_locus_tag=CCO47_20070 NZ_CP075113.1 Protein Homology CDS 4102201 4102845 . + 0 ID=cds-WP_000090068.1;Parent=gene-CCO47_RS20070;Dbxref=GenBank:WP_000090068.1;Name=WP_000090068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463433.2;locus_tag=CCO47_RS20070;product=YtjB family periplasmic protein;protein_id=WP_000090068.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4102879 4103895 . + . ID=gene-CCO47_RS20075;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=CCO47_RS20075;old_locus_tag=CCO47_20075 NZ_CP075113.1 Protein Homology CDS 4102879 4103895 . + 0 ID=cds-WP_000209763.1;Parent=gene-CCO47_RS20075;Dbxref=GenBank:WP_000209763.1;Name=WP_000209763.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463432.1;locus_tag=CCO47_RS20075;product=lipoate--protein ligase;protein_id=WP_000209763.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4103900 4105228 . - . ID=gene-CCO47_RS20080;Name=yjjJ;gbkey=Gene;gene=yjjJ;gene_biotype=protein_coding;locus_tag=CCO47_RS20080;old_locus_tag=CCO47_20080 NZ_CP075113.1 Protein Homology CDS 4103900 4105228 . - 0 ID=cds-WP_001275365.1;Parent=gene-CCO47_RS20080;Dbxref=GenBank:WP_001275365.1;Name=WP_001275365.1;gbkey=CDS;gene=yjjJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747246.1;locus_tag=CCO47_RS20080;product=type II toxin-antitoxin system HipA family toxin YjjJ;protein_id=WP_001275365.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4105407 4106126 . - . ID=gene-CCO47_RS20085;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=CCO47_RS20085;old_locus_tag=CCO47_20085 NZ_CP075113.1 Protein Homology CDS 4105407 4106126 . - 0 ID=cds-WP_000224865.1;Parent=gene-CCO47_RS20085;Dbxref=GenBank:WP_000224865.1;Name=WP_000224865.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463426.1;locus_tag=CCO47_RS20085;product=purine-nucleoside phosphorylase;protein_id=WP_000224865.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4106336 4107559 . - . ID=gene-CCO47_RS20090;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=CCO47_RS20090;old_locus_tag=CCO47_20090 NZ_CP075113.1 Protein Homology CDS 4106336 4107559 . - 0 ID=cds-WP_000816456.1;Parent=gene-CCO47_RS20090;Dbxref=GenBank:WP_000816456.1;Name=WP_000816456.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463425.1;locus_tag=CCO47_RS20090;product=phosphopentomutase;protein_id=WP_000816456.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4107611 4108933 . - . ID=gene-CCO47_RS20095;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=CCO47_RS20095;old_locus_tag=CCO47_20095 NZ_CP075113.1 Protein Homology CDS 4107611 4108933 . - 0 ID=cds-WP_000477838.1;Parent=gene-CCO47_RS20095;Dbxref=GenBank:WP_000477838.1;Name=WP_000477838.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=CCO47_RS20095;product=thymidine phosphorylase;protein_id=WP_000477838.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4109057 4109836 . - . ID=gene-CCO47_RS20100;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=CCO47_RS20100;old_locus_tag=CCO47_20100 NZ_CP075113.1 Protein Homology CDS 4109057 4109836 . - 0 ID=cds-WP_001519713.1;Parent=gene-CCO47_RS20100;Dbxref=GenBank:WP_001519713.1;Name=WP_001519713.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=CCO47_RS20100;product=deoxyribose-phosphate aldolase;protein_id=WP_001519713.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4110096 4111646 . + . ID=gene-CCO47_RS20105;Name=CCO47_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20105;old_locus_tag=CCO47_20105 NZ_CP075113.1 Protein Homology CDS 4110096 4111646 . + 0 ID=cds-WP_001111670.1;Parent=gene-CCO47_RS20105;Dbxref=GenBank:WP_001111670.1;Name=WP_001111670.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463422.1;locus_tag=CCO47_RS20105;product=YjjI family glycine radical enzyme;protein_id=WP_001111670.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4111618 4112481 . + . ID=gene-CCO47_RS20110;Name=CCO47_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20110;old_locus_tag=CCO47_20110 NZ_CP075113.1 Protein Homology CDS 4111618 4112481 . + 0 ID=cds-WP_001064947.1;Parent=gene-CCO47_RS20110;Dbxref=GenBank:WP_001064947.1;Name=WP_001064947.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=CCO47_RS20110;product=YjjW family glycine radical enzyme activase;protein_id=WP_001064947.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4112514 4113287 . - . ID=gene-CCO47_RS20115;Name=CCO47_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20115;old_locus_tag=CCO47_20115 NZ_CP075113.1 Protein Homology CDS 4112514 4113287 . - 0 ID=cds-WP_000119005.1;Parent=gene-CCO47_RS20115;Dbxref=GenBank:WP_000119005.1;Name=WP_000119005.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463420.1;locus_tag=CCO47_RS20115;product=metal-dependent hydrolase;protein_id=WP_000119005.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4113284 4114357 . - . ID=gene-CCO47_RS20120;Name=CCO47_RS20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20120;old_locus_tag=CCO47_20120 NZ_CP075113.1 Protein Homology CDS 4113284 4114357 . - 0 ID=cds-WP_001575401.1;Parent=gene-CCO47_RS20120;Dbxref=GenBank:WP_001575401.1;Name=WP_001575401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=CCO47_RS20120;product=patatin-like phospholipase family protein;protein_id=WP_001575401.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4114481 4114642 . - . ID=gene-CCO47_RS20125;Name=CCO47_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20125;old_locus_tag=CCO47_20125 NZ_CP075113.1 Protein Homology CDS 4114481 4114642 . - 0 ID=cds-WP_000490276.1;Parent=gene-CCO47_RS20125;Dbxref=GenBank:WP_000490276.1;Name=WP_000490276.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=CCO47_RS20125;product=DUF1328 domain-containing protein;protein_id=WP_000490276.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4114771 4115388 . - . ID=gene-CCO47_RS20130;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=CCO47_RS20130;old_locus_tag=CCO47_20130 NZ_CP075113.1 Protein Homology CDS 4114771 4115388 . - 0 ID=cds-WP_000178963.1;Parent=gene-CCO47_RS20130;Dbxref=GenBank:WP_000178963.1;Name=WP_000178963.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463417.1;locus_tag=CCO47_RS20130;product=molecular chaperone OsmY;protein_id=WP_000178963.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4115790 4117379 . - . ID=gene-CCO47_RS20135;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=CCO47_RS20135;old_locus_tag=CCO47_20135 NZ_CP075113.1 Protein Homology CDS 4115790 4117379 . - 0 ID=cds-WP_000175965.1;Parent=gene-CCO47_RS20135;Dbxref=GenBank:WP_000175965.1;Name=WP_000175965.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=CCO47_RS20135;product=peptide chain release factor 3;protein_id=WP_000175965.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4117471 4118148 . - . ID=gene-CCO47_RS20140;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=CCO47_RS20140;old_locus_tag=CCO47_20140 NZ_CP075113.1 Protein Homology CDS 4117471 4118148 . - 0 ID=cds-WP_000870686.1;Parent=gene-CCO47_RS20140;Dbxref=GenBank:WP_000870686.1;Name=WP_000870686.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=CCO47_RS20140;product=pyrimidine 5'-nucleotidase;protein_id=WP_000870686.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4118170 4118616 . - . ID=gene-CCO47_RS20145;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=CCO47_RS20145;old_locus_tag=CCO47_20145 NZ_CP075113.1 Protein Homology CDS 4118170 4118616 . - 0 ID=cds-WP_001092431.1;Parent=gene-CCO47_RS20145;Dbxref=GenBank:WP_001092431.1;Name=WP_001092431.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463414.1;locus_tag=CCO47_RS20145;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092431.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4118561 4118998 . - . ID=gene-CCO47_RS20150;Name=CCO47_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20150;old_locus_tag=CCO47_20150 NZ_CP075113.1 Protein Homology CDS 4118561 4118998 . - 0 ID=cds-WP_000203996.1;Parent=gene-CCO47_RS20150;Dbxref=GenBank:WP_000203996.1;Name=WP_000203996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463413.1;locus_tag=CCO47_RS20150;product=DNA polymerase III subunit psi;protein_id=WP_000203996.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4119101 4120129 . + . ID=gene-CCO47_RS20155;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=CCO47_RS20155;old_locus_tag=CCO47_20155 NZ_CP075113.1 Protein Homology CDS 4119101 4120129 . + 0 ID=cds-WP_001272276.1;Parent=gene-CCO47_RS20155;Dbxref=GenBank:WP_001272276.1;Name=WP_001272276.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=CCO47_RS20155;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_001272276.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4120320 4120406 . + . ID=gene-CCO47_RS20160;Name=CCO47_RS20160;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS20160;old_locus_tag=CCO47_20160 NZ_CP075113.1 tRNAscan-SE tRNA 4120320 4120406 . + . ID=rna-CCO47_RS20160;Parent=gene-CCO47_RS20160;anticodon=(pos:4120354..4120356);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS20160;product=tRNA-Leu NZ_CP075113.1 tRNAscan-SE exon 4120320 4120406 . + . ID=exon-CCO47_RS20160-1;Parent=rna-CCO47_RS20160;anticodon=(pos:4120354..4120356);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS20160;product=tRNA-Leu NZ_CP075113.1 RefSeq gene 4120434 4120520 . + . ID=gene-CCO47_RS20165;Name=CCO47_RS20165;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS20165;old_locus_tag=CCO47_20165 NZ_CP075113.1 tRNAscan-SE tRNA 4120434 4120520 . + . ID=rna-CCO47_RS20165;Parent=gene-CCO47_RS20165;anticodon=(pos:4120468..4120470);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS20165;product=tRNA-Leu NZ_CP075113.1 tRNAscan-SE exon 4120434 4120520 . + . ID=exon-CCO47_RS20165-1;Parent=rna-CCO47_RS20165;anticodon=(pos:4120468..4120470);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS20165;product=tRNA-Leu NZ_CP075113.1 RefSeq gene 4120552 4120638 . + . ID=gene-CCO47_RS20170;Name=CCO47_RS20170;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS20170;old_locus_tag=CCO47_20170 NZ_CP075113.1 tRNAscan-SE tRNA 4120552 4120638 . + . ID=rna-CCO47_RS20170;Parent=gene-CCO47_RS20170;anticodon=(pos:4120586..4120588);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS20170;product=tRNA-Leu NZ_CP075113.1 tRNAscan-SE exon 4120552 4120638 . + . ID=exon-CCO47_RS20170-1;Parent=rna-CCO47_RS20170;anticodon=(pos:4120586..4120588);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS20170;product=tRNA-Leu NZ_CP075113.1 RefSeq gene 4120670 4120906 . - . ID=gene-CCO47_RS20175;Name=CCO47_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20175;old_locus_tag=CCO47_20175 NZ_CP075113.1 Protein Homology CDS 4120670 4120906 . - 0 ID=cds-WP_000941876.1;Parent=gene-CCO47_RS20175;Dbxref=GenBank:WP_000941876.1;Name=WP_000941876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463411.1;locus_tag=CCO47_RS20175;product=DUF1435 domain-containing protein;protein_id=WP_000941876.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4121157 4122221 . + . ID=gene-CCO47_RS20180;Name=CCO47_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20180;old_locus_tag=CCO47_20180 NZ_CP075113.1 Protein Homology CDS 4121157 4122221 . + 0 ID=cds-WP_000211207.1;Parent=gene-CCO47_RS20180;Dbxref=GenBank:WP_000211207.1;Name=WP_000211207.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463410.1;locus_tag=CCO47_RS20180;product=GGDEF domain-containing protein;protein_id=WP_000211207.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4122342 4123130 . + . ID=gene-CCO47_RS20185;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=CCO47_RS20185;old_locus_tag=CCO47_20185 NZ_CP075113.1 Protein Homology CDS 4122342 4123130 . + 0 ID=cds-WP_000331543.1;Parent=gene-CCO47_RS20185;Dbxref=GenBank:WP_000331543.1;Name=WP_000331543.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463409.1;locus_tag=CCO47_RS20185;product=siderophore-iron reductase FhuF;protein_id=WP_000331543.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4123289 4123747 . + . ID=gene-CCO47_RS20190;Name=CCO47_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20190;old_locus_tag=CCO47_20190 NZ_CP075113.1 Protein Homology CDS 4123289 4123747 . + 0 ID=cds-WP_000058276.1;Parent=gene-CCO47_RS20190;Dbxref=GenBank:WP_000058276.1;Name=WP_000058276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463408.1;locus_tag=CCO47_RS20190;product=YbaK/EbsC family protein;protein_id=WP_000058276.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4123798 4124472 . - . ID=gene-CCO47_RS20195;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=CCO47_RS20195;old_locus_tag=CCO47_20195 NZ_CP075113.1 Protein Homology CDS 4123798 4124472 . - 0 ID=cds-WP_000431553.1;Parent=gene-CCO47_RS20195;Dbxref=GenBank:WP_000431553.1;Name=WP_000431553.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=CCO47_RS20195;product=DNA-binding transcriptional activator BglJ;protein_id=WP_000431553.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4124433 4125158 . - . ID=gene-CCO47_RS20200;Name=CCO47_RS20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20200;old_locus_tag=CCO47_20200 NZ_CP075113.1 Protein Homology CDS 4124433 4125158 . - 0 ID=cds-WP_094912375.1;Parent=gene-CCO47_RS20200;Dbxref=GenBank:WP_094912375.1;Name=WP_094912375.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463406.1;locus_tag=CCO47_RS20200;product=response regulator transcription factor;protein_id=WP_094912375.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4125871 4126647 . + . ID=gene-CCO47_RS20205;Name=CCO47_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20205;old_locus_tag=CCO47_20205 NZ_CP075113.1 Protein Homology CDS 4125871 4126647 . + 0 ID=cds-WP_001674846.1;Parent=gene-CCO47_RS20205;Dbxref=GenBank:WP_001674846.1;Name=WP_001674846.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=CCO47_RS20205;product=threonine/serine exporter family protein;protein_id=WP_001674846.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4126638 4127111 . + . ID=gene-CCO47_RS20210;Name=CCO47_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20210;old_locus_tag=CCO47_20210 NZ_CP075113.1 Protein Homology CDS 4126638 4127111 . + 0 ID=cds-WP_000511329.1;Parent=gene-CCO47_RS20210;Dbxref=GenBank:WP_000511329.1;Name=WP_000511329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=CCO47_RS20210;product=threonine/serine exporter;protein_id=WP_000511329.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4127204 4127743 . + . ID=gene-CCO47_RS20215;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=CCO47_RS20215;old_locus_tag=CCO47_20215 NZ_CP075113.1 Protein Homology CDS 4127204 4127743 . + 0 ID=cds-WP_000098573.1;Parent=gene-CCO47_RS20215;Dbxref=GenBank:WP_000098573.1;Name=WP_000098573.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463403.1;locus_tag=CCO47_RS20215;product=primosomal protein DnaT;protein_id=WP_000098573.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4127746 4128483 . + . ID=gene-CCO47_RS20220;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=CCO47_RS20220;old_locus_tag=CCO47_20220 NZ_CP075113.1 Protein Homology CDS 4127746 4128483 . + 0 ID=cds-WP_000789238.1;Parent=gene-CCO47_RS20220;Dbxref=GenBank:WP_000789238.1;Name=WP_000789238.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463402.1;locus_tag=CCO47_RS20220;product=replicative helicase loader DnaC;protein_id=WP_000789238.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4128541 4129002 . + . ID=gene-CCO47_RS20225;Name=CCO47_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20225;old_locus_tag=CCO47_20225 NZ_CP075113.1 Protein Homology CDS 4128541 4129002 . + 0 ID=cds-WP_001090314.1;Parent=gene-CCO47_RS20225;Dbxref=GenBank:WP_001090314.1;Name=WP_001090314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463401.1;locus_tag=CCO47_RS20225;product=YjjA family protein;protein_id=WP_001090314.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4129285 4131576 . + . ID=gene-CCO47_RS20230;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=CCO47_RS20230;old_locus_tag=CCO47_20230 NZ_CP075113.1 Protein Homology CDS 4129285 4131576 . + 0 ID=cds-WP_001292722.1;Parent=gene-CCO47_RS20230;Dbxref=GenBank:WP_001292722.1;Name=WP_001292722.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465680.1;locus_tag=CCO47_RS20230;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_001292722.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4131710 4132720 . - . ID=gene-CCO47_RS20235;Name=CCO47_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20235;old_locus_tag=CCO47_20235 NZ_CP075113.1 Protein Homology CDS 4131710 4132720 . - 0 ID=cds-WP_000900307.1;Parent=gene-CCO47_RS20235;Dbxref=GenBank:WP_000900307.1;Name=WP_000900307.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224961.1;locus_tag=CCO47_RS20235;product=SIS domain-containing protein;protein_id=WP_000900307.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4132738 4133796 . - . ID=gene-CCO47_RS20240;Name=CCO47_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20240;old_locus_tag=CCO47_20240 NZ_CP075113.1 Protein Homology CDS 4132738 4133796 . - 0 ID=cds-WP_000075420.1;Parent=gene-CCO47_RS20240;Dbxref=GenBank:WP_000075420.1;Name=WP_000075420.1;Ontology_term=GO:0005975,GO:0016787,GO:0097367;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463398.1;locus_tag=CCO47_RS20240;product=SIS domain-containing protein;protein_id=WP_000075420.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4133809 4134657 . - . ID=gene-CCO47_RS20245;Name=CCO47_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20245;old_locus_tag=CCO47_20245 NZ_CP075113.1 Protein Homology CDS 4133809 4134657 . - 0 ID=cds-WP_000178065.1;Parent=gene-CCO47_RS20245;Dbxref=GenBank:WP_000178065.1;Name=WP_000178065.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224959.1;locus_tag=CCO47_RS20245;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000178065.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4134635 4135414 . - . ID=gene-CCO47_RS20250;Name=CCO47_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20250;old_locus_tag=CCO47_20250 NZ_CP075113.1 Protein Homology CDS 4134635 4135414 . - 0 ID=cds-WP_000228864.1;Parent=gene-CCO47_RS20250;Dbxref=GenBank:WP_000228864.1;Name=WP_000228864.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463396.1;locus_tag=CCO47_RS20250;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000228864.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4135440 4135901 . - . ID=gene-CCO47_RS20255;Name=CCO47_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20255;old_locus_tag=CCO47_20255 NZ_CP075113.1 Protein Homology CDS 4135440 4135901 . - 0 ID=cds-WP_000634729.1;Parent=gene-CCO47_RS20255;Dbxref=GenBank:WP_000634729.1;Name=WP_000634729.1;Ontology_term=GO:0008643,GO:0009401,GO:0034219,GO:0008982,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463395.1;locus_tag=CCO47_RS20255;product=PTS sugar transporter subunit IIB;protein_id=WP_000634729.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4135916 4136338 . - . ID=gene-CCO47_RS20260;Name=CCO47_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20260;old_locus_tag=CCO47_20260 NZ_CP075113.1 Protein Homology CDS 4135916 4136338 . - 0 ID=cds-WP_000820693.1;Parent=gene-CCO47_RS20260;Dbxref=GenBank:WP_000820693.1;Name=WP_000820693.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0034219,GO:0008982,GO:0016301,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463394.1;locus_tag=CCO47_RS20260;product=PTS sugar transporter subunit IIA;protein_id=WP_000820693.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4136440 4139205 . - . ID=gene-CCO47_RS20265;Name=CCO47_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20265;old_locus_tag=CCO47_20265 NZ_CP075113.1 Protein Homology CDS 4136440 4139205 . - 0 ID=cds-WP_001224224.1;Parent=gene-CCO47_RS20265;Dbxref=GenBank:WP_001224224.1;Name=WP_001224224.1;Ontology_term=GO:0006355,GO:0009401,GO:0001216,GO:0005524,GO:0016301,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=CCO47_RS20265;product=sigma-54-dependent transcriptional regulator;protein_id=WP_001224224.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4139528 4141189 . - . ID=gene-CCO47_RS20270;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=CCO47_RS20270;old_locus_tag=CCO47_20270 NZ_CP075113.1 Protein Homology CDS 4139528 4141189 . - 0 ID=cds-WP_000919512.1;Parent=gene-CCO47_RS20270;Dbxref=GenBank:WP_000919512.1;Name=WP_000919512.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=CCO47_RS20270;product=methyl-accepting chemotaxis protein;protein_id=WP_000919512.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4141556 4143706 . + . ID=gene-CCO47_RS20275;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=CCO47_RS20275;old_locus_tag=CCO47_20275 NZ_CP075113.1 Protein Homology CDS 4141556 4143706 . + 0 ID=cds-WP_000379928.1;Parent=gene-CCO47_RS20275;Dbxref=GenBank:WP_000379928.1;Name=WP_000379928.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463391.1;locus_tag=CCO47_RS20275;product=pyruvate/proton symporter BtsT;protein_id=WP_000379928.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4143801 4144004 . + . ID=gene-CCO47_RS20280;Name=CCO47_RS20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20280;old_locus_tag=CCO47_20280 NZ_CP075113.1 Protein Homology CDS 4143801 4144004 . + 0 ID=cds-WP_000460616.1;Parent=gene-CCO47_RS20280;Dbxref=GenBank:WP_000460616.1;Name=WP_000460616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463390.1;locus_tag=CCO47_RS20280;product=YbdD/YjiX family protein;protein_id=WP_000460616.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4144015 4144971 . + . ID=gene-CCO47_RS20285;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=CCO47_RS20285;old_locus_tag=CCO47_20285 NZ_CP075113.1 Protein Homology CDS 4144015 4144971 . + 0 ID=cds-WP_000187843.1;Parent=gene-CCO47_RS20285;Dbxref=GenBank:WP_000187843.1;Name=WP_000187843.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463389.1;locus_tag=CCO47_RS20285;product=GTPase;protein_id=WP_000187843.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4145046 4145348 . - . ID=gene-CCO47_RS20290;Name=CCO47_RS20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20290;old_locus_tag=CCO47_20290 NZ_CP075113.1 Protein Homology CDS 4145046 4145348 . - 0 ID=cds-WP_000063141.1;Parent=gene-CCO47_RS20290;Dbxref=GenBank:WP_000063141.1;Name=WP_000063141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463388.1;locus_tag=CCO47_RS20290;product=BrnA antitoxin family protein;protein_id=WP_000063141.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4145335 4145622 . - . ID=gene-CCO47_RS20295;Name=CCO47_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20295;old_locus_tag=CCO47_20295 NZ_CP075113.1 Protein Homology CDS 4145335 4145622 . - 0 ID=cds-WP_001131963.1;Parent=gene-CCO47_RS20295;Dbxref=GenBank:WP_001131963.1;Name=WP_001131963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463387.1;locus_tag=CCO47_RS20295;product=BrnT family toxin;protein_id=WP_001131963.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4146046 4147887 . + . ID=gene-CCO47_RS20300;Name=CCO47_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20300;old_locus_tag=CCO47_20300 NZ_CP075113.1 Protein Homology CDS 4146046 4147887 . + 0 ID=cds-WP_000974635.1;Parent=gene-CCO47_RS20300;Dbxref=GenBank:WP_000974635.1;Name=WP_000974635.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000974638.1;locus_tag=CCO47_RS20300;product=3'-5' exonuclease;protein_id=WP_000974635.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4148500 4149075 . + . ID=gene-CCO47_RS20305;Name=CCO47_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20305;old_locus_tag=CCO47_20305 NZ_CP075113.1 Protein Homology CDS 4148500 4149075 . + 0 ID=cds-WP_000593782.1;Parent=gene-CCO47_RS20305;Dbxref=GenBank:WP_000593782.1;Name=WP_000593782.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000593782.1;locus_tag=CCO47_RS20305;product=restriction endonuclease subunit S;protein_id=WP_000593782.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4149506 4150332 . + . ID=gene-CCO47_RS20310;Name=CCO47_RS20310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS20310;old_locus_tag=CCO47_20310;pseudo=true NZ_CP075113.1 Protein Homology CDS 4149506 4150332 . + 0 ID=cds-CCO47_RS20310;Parent=gene-CCO47_RS20310;Note=frameshifted;Ontology_term=GO:0009307,GO:0003677,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: protein motif:HMM:NF014442.7;locus_tag=CCO47_RS20310;product=HsdM family class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 4150364 4150498 . - . ID=gene-CCO47_RS24290;Name=CCO47_RS24290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24290 NZ_CP075113.1 Protein Homology CDS 4150364 4150498 . - 0 ID=cds-WP_001055725.1;Parent=gene-CCO47_RS24290;Dbxref=GenBank:WP_001055725.1;Name=WP_001055725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001055725.1;locus_tag=CCO47_RS24290;product=hypothetical protein;protein_id=WP_001055725.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4150623 4151789 . + . ID=gene-CCO47_RS20315;Name=CCO47_RS20315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS20315;old_locus_tag=CCO47_20315;pseudo=true NZ_CP075113.1 Protein Homology CDS 4150623 4151789 . + 0 ID=cds-CCO47_RS20315;Parent=gene-CCO47_RS20315;Note=frameshifted;Ontology_term=GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000800831.1;locus_tag=CCO47_RS20315;product=restriction endonuclease;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 4151853 4153472 . + . ID=gene-CCO47_RS20320;Name=CCO47_RS20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20320;old_locus_tag=CCO47_20320 NZ_CP075113.1 Protein Homology CDS 4151853 4153472 . + 0 ID=cds-WP_001029734.1;Parent=gene-CCO47_RS20320;Dbxref=GenBank:WP_001029734.1;Name=WP_001029734.1;Ontology_term=GO:0003677,GO:0008168,GO:0009007,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238256.1;locus_tag=CCO47_RS20320;product=type I restriction-modification system subunit M;protein_id=WP_001029734.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4153462 4154766 . + . ID=gene-CCO47_RS24500;Name=CCO47_RS24500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24500;old_locus_tag=CCO47_20325;pseudo=true NZ_CP075113.1 Protein Homology CDS 4153462 4154766 . + 0 ID=cds-CCO47_RS24500;Parent=gene-CCO47_RS24500;Note=internal stop;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000863532.1;locus_tag=CCO47_RS24500;product=restriction endonuclease subunit S;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 4154861 4158127 . + . ID=gene-CCO47_RS20330;Name=CCO47_RS20330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20330;old_locus_tag=CCO47_20330 NZ_CP075113.1 Protein Homology CDS 4154861 4158127 . + 0 ID=cds-WP_000550711.1;Parent=gene-CCO47_RS20330;Dbxref=GenBank:WP_000550711.1;Name=WP_000550711.1;Ontology_term=GO:0009307,GO:0003677,GO:0004386,GO:0005524,GO:0009035,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,type I site-specific deoxyribonuclease activity|0009035||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000550711.1;locus_tag=CCO47_RS20330;product=type I restriction endonuclease subunit R;protein_id=WP_000550711.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4158291 4159211 . + . ID=gene-CCO47_RS20335;Name=CCO47_RS20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20335;old_locus_tag=CCO47_20335 NZ_CP075113.1 Protein Homology CDS 4158291 4159211 . + 0 ID=cds-WP_001280242.1;Parent=gene-CCO47_RS20335;Dbxref=GenBank:WP_001280242.1;Name=WP_001280242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280241.1;locus_tag=CCO47_RS20335;product=DUF5655 domain-containing protein;protein_id=WP_001280242.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4159288 4159452 . - . ID=gene-CCO47_RS20340;Name=yjiS;gbkey=Gene;gene=yjiS;gene_biotype=protein_coding;locus_tag=CCO47_RS20340;old_locus_tag=CCO47_20340 NZ_CP075113.1 Protein Homology CDS 4159288 4159452 . - 0 ID=cds-WP_000397916.1;Parent=gene-CCO47_RS20340;Dbxref=GenBank:WP_000397916.1;Name=WP_000397916.1;gbkey=CDS;gene=yjiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463380.1;locus_tag=CCO47_RS20340;product=DUF1127 domain-containing protein YjiS;protein_id=WP_000397916.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4159419 4159562 . + . ID=gene-CCO47_RS20345;Name=CCO47_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20345;old_locus_tag=CCO47_20345 NZ_CP075113.1 Protein Homology CDS 4159419 4159562 . + 0 ID=cds-WP_001752348.1;Parent=gene-CCO47_RS20345;Dbxref=GenBank:WP_001752348.1;Name=WP_001752348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463379.1;locus_tag=CCO47_RS20345;product=hypothetical protein;protein_id=WP_001752348.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4159657 4161027 . - . ID=gene-CCO47_RS20350;Name=CCO47_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20350;old_locus_tag=CCO47_20350 NZ_CP075113.1 Protein Homology CDS 4159657 4161027 . - 0 ID=cds-WP_000331438.1;Parent=gene-CCO47_RS20350;Dbxref=GenBank:WP_000331438.1;Name=WP_000331438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463378.1;locus_tag=CCO47_RS20350;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_000331438.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4161208 4162160 . - . ID=gene-CCO47_RS20355;Name=CCO47_RS20355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS20355;old_locus_tag=CCO47_20355;pseudo=true NZ_CP075113.1 Protein Homology CDS 4161208 4162160 . - 0 ID=cds-CCO47_RS20355;Parent=gene-CCO47_RS20355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=CCO47_RS20355;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 4162639 4163880 . + . ID=gene-CCO47_RS20360;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=CCO47_RS20360;old_locus_tag=CCO47_20360 NZ_CP075113.1 Protein Homology CDS 4162639 4163880 . + 0 ID=cds-WP_001188918.1;Parent=gene-CCO47_RS20360;Dbxref=GenBank:WP_001188918.1;Name=WP_001188918.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463376.1;locus_tag=CCO47_RS20360;product=multidrug efflux MFS transporter MdtM;protein_id=WP_001188918.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4163967 4165238 . + . ID=gene-CCO47_RS20365;Name=CCO47_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20365;old_locus_tag=CCO47_20365 NZ_CP075113.1 Protein Homology CDS 4163967 4165238 . + 0 ID=cds-WP_001033033.1;Parent=gene-CCO47_RS20365;Dbxref=GenBank:WP_001033033.1;Name=WP_001033033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463375.1;locus_tag=CCO47_RS20365;product=DUF445 domain-containing protein;protein_id=WP_001033033.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4165458 4166642 . + . ID=gene-CCO47_RS20370;Name=CCO47_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20370;old_locus_tag=CCO47_20370 NZ_CP075113.1 Protein Homology CDS 4165458 4166642 . + 0 ID=cds-WP_000233266.1;Parent=gene-CCO47_RS20370;Dbxref=GenBank:WP_000233266.1;Name=WP_000233266.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463374.1;locus_tag=CCO47_RS20370;product=MFS transporter;protein_id=WP_000233266.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4167515 4168186 . + . ID=gene-CCO47_RS20375;Name=CCO47_RS20375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20375;old_locus_tag=CCO47_20375 NZ_CP075113.1 Protein Homology CDS 4167515 4168186 . + 0 ID=cds-WP_000068752.1;Parent=gene-CCO47_RS20375;Dbxref=GenBank:WP_000068752.1;Name=WP_000068752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=CCO47_RS20375;product=nucleoside recognition domain-containing protein;protein_id=WP_000068752.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4168183 4168644 . + . ID=gene-CCO47_RS20380;Name=CCO47_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20380;old_locus_tag=CCO47_20380 NZ_CP075113.1 Protein Homology CDS 4168183 4168644 . + 0 ID=cds-WP_000211979.1;Parent=gene-CCO47_RS20380;Dbxref=GenBank:WP_000211979.1;Name=WP_000211979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463372.1;locus_tag=CCO47_RS20380;product=YjiG family protein;protein_id=WP_000211979.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4168657 4169829 . + . ID=gene-CCO47_RS20385;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=CCO47_RS20385;old_locus_tag=CCO47_20385 NZ_CP075113.1 Protein Homology CDS 4168657 4169829 . + 0 ID=cds-WP_001113059.1;Parent=gene-CCO47_RS20385;Dbxref=GenBank:WP_001113059.1;Name=WP_001113059.1;Ontology_term=GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463371.1;locus_tag=CCO47_RS20385;product=beta-aspartyl-peptidase;protein_id=WP_001113059.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4169948 4170856 . + . ID=gene-CCO47_RS20390;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=CCO47_RS20390;old_locus_tag=CCO47_20390 NZ_CP075113.1 Protein Homology CDS 4169948 4170856 . + 0 ID=cds-WP_000383516.1;Parent=gene-CCO47_RS20390;Dbxref=GenBank:WP_000383516.1;Name=WP_000383516.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463370.1;locus_tag=CCO47_RS20390;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000383516.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4170862 4171596 . - . ID=gene-CCO47_RS20395;Name=cuyB;gbkey=Gene;gene=cuyB;gene_biotype=protein_coding;locus_tag=CCO47_RS20395;old_locus_tag=CCO47_20395 NZ_CP075113.1 Protein Homology CDS 4170862 4171596 . - 0 ID=cds-WP_000683251.1;Parent=gene-CCO47_RS20395;Dbxref=GenBank:WP_000683251.1;Name=WP_000683251.1;gbkey=CDS;gene=cuyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463369.1;locus_tag=CCO47_RS20395;product=cysteate racemase;protein_id=WP_000683251.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4171835 4172365 . - . ID=gene-CCO47_RS20400;Name=CCO47_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20400;old_locus_tag=CCO47_20400 NZ_CP075113.1 Protein Homology CDS 4171835 4172365 . - 0 ID=cds-WP_000907670.1;Parent=gene-CCO47_RS20400;Dbxref=GenBank:WP_000907670.1;Name=WP_000907670.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463368.3;locus_tag=CCO47_RS20400;product=Hcp family type VI secretion system effector;protein_id=WP_000907670.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4173083 4174096 . + . ID=gene-CCO47_RS20405;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CCO47_RS20405;old_locus_tag=CCO47_20405 NZ_CP075113.1 Protein Homology CDS 4173083 4174096 . + 0 ID=cds-WP_001094620.1;Parent=gene-CCO47_RS20405;Dbxref=GenBank:WP_001094620.1;Name=WP_001094620.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463367.1;locus_tag=CCO47_RS20405;product=tryptophan--tRNA ligase;protein_id=WP_001094620.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4174097 4174870 . - . ID=gene-CCO47_RS20410;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=CCO47_RS20410;old_locus_tag=CCO47_20410 NZ_CP075113.1 Protein Homology CDS 4174097 4174870 . - 0 ID=cds-WP_000841654.1;Parent=gene-CCO47_RS20410;Dbxref=GenBank:WP_000841654.1;Name=WP_000841654.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=CCO47_RS20410;product=Uxu operon transcriptional regulator;protein_id=WP_000841654.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4175220 4175894 . + . ID=gene-CCO47_RS20415;Name=CCO47_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20415;old_locus_tag=CCO47_20415 NZ_CP075113.1 Protein Homology CDS 4175220 4175894 . + 0 ID=cds-WP_000588701.1;Parent=gene-CCO47_RS20415;Dbxref=GenBank:WP_000588701.1;Name=WP_000588701.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463365.1;locus_tag=CCO47_RS20415;product=dienelactone hydrolase family protein;protein_id=WP_000588701.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4175891 4176352 . - . ID=gene-CCO47_RS20420;Name=CCO47_RS20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20420;old_locus_tag=CCO47_20420 NZ_CP075113.1 Protein Homology CDS 4175891 4176352 . - 0 ID=cds-WP_001642121.1;Parent=gene-CCO47_RS20420;Dbxref=GenBank:WP_001642121.1;Name=WP_001642121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463364.1;locus_tag=CCO47_RS20420;product=DUF302 domain-containing protein;protein_id=WP_001642121.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4176557 4177468 . - . ID=gene-CCO47_RS20425;Name=CCO47_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20425;old_locus_tag=CCO47_20425 NZ_CP075113.1 Protein Homology CDS 4176557 4177468 . - 0 ID=cds-WP_000556778.1;Parent=gene-CCO47_RS20425;Dbxref=GenBank:WP_000556778.1;Name=WP_000556778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463363.1;locus_tag=CCO47_RS20425;product=STM4504/CBY_0614 family protein;protein_id=WP_000556778.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4177822 4178430 . - . ID=gene-CCO47_RS20430;Name=CCO47_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20430;old_locus_tag=CCO47_20430 NZ_CP075113.1 Protein Homology CDS 4177822 4178430 . - 0 ID=cds-WP_000864861.1;Parent=gene-CCO47_RS20430;Dbxref=GenBank:WP_000864861.1;Name=WP_000864861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463361.1;locus_tag=CCO47_RS20430;product=DUF1062 domain-containing protein;protein_id=WP_000864861.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4178917 4179174 . + . ID=gene-CCO47_RS20435;Name=CCO47_RS20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20435;old_locus_tag=CCO47_20435 NZ_CP075113.1 Protein Homology CDS 4178917 4179174 . + 0 ID=cds-WP_001054381.1;Parent=gene-CCO47_RS20435;Dbxref=GenBank:WP_001054381.1;Name=WP_001054381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463360.1;locus_tag=CCO47_RS20435;product=YjhX family toxin;protein_id=WP_001054381.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4179179 4180810 . + . ID=gene-CCO47_RS20440;Name=CCO47_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20440;old_locus_tag=CCO47_20440 NZ_CP075113.1 Protein Homology CDS 4179179 4180810 . + 0 ID=cds-WP_077906692.1;Parent=gene-CCO47_RS20440;Dbxref=GenBank:WP_077906692.1;Name=WP_077906692.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=CCO47_RS20440;product=class I SAM-dependent methyltransferase;protein_id=WP_077906692.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4181370 4182074 . + . ID=gene-CCO47_RS20445;Name=CCO47_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20445;old_locus_tag=CCO47_20445 NZ_CP075113.1 Protein Homology CDS 4181370 4182074 . + 0 ID=cds-WP_000532941.1;Parent=gene-CCO47_RS20445;Dbxref=GenBank:WP_000532941.1;Name=WP_000532941.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310807.1;locus_tag=CCO47_RS20445;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000532941.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4182554 4183429 . - . ID=gene-CCO47_RS20450;Name=CCO47_RS20450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS20450;old_locus_tag=CCO47_20450;pseudo=true NZ_CP075113.1 Protein Homology CDS 4182554 4183429 . - 0 ID=cds-CCO47_RS20450;Parent=gene-CCO47_RS20450;Note=internal stop;Ontology_term=GO:0009307,GO:0015666;gbkey=CDS;go_function=restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465694.1;locus_tag=CCO47_RS20450;product=phosphorothioated DNA-binding restriction endonuclease;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4183685 4184795 . - . ID=gene-CCO47_RS20455;Name=CCO47_RS20455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS20455;old_locus_tag=CCO47_20455;pseudo=true NZ_CP075113.1 Protein Homology CDS 4183685 4184795 . - 0 ID=cds-CCO47_RS20455;Parent=gene-CCO47_RS20455;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611500.1;locus_tag=CCO47_RS20455;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4185058 4185904 . - . ID=gene-CCO47_RS20460;Name=CCO47_RS20460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS20460;old_locus_tag=CCO47_20460;pseudo=true NZ_CP075113.1 Protein Homology CDS 4185058 4185904 . - 0 ID=cds-CCO47_RS20460;Parent=gene-CCO47_RS20460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000490324.1;locus_tag=CCO47_RS20460;product=SdiA-regulated domain-containing protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 4185955 4186101 . - . ID=gene-CCO47_RS20465;Name=CCO47_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20465;old_locus_tag=CCO47_20465 NZ_CP075113.1 Protein Homology CDS 4185955 4186101 . - 0 ID=cds-WP_001141717.1;Parent=gene-CCO47_RS20465;Dbxref=GenBank:WP_001141717.1;Name=WP_001141717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001141719.1;locus_tag=CCO47_RS20465;product=hypothetical protein;protein_id=WP_001141717.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4186091 4186744 . - . ID=gene-CCO47_RS20470;Name=CCO47_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20470;old_locus_tag=CCO47_20470 NZ_CP075113.1 Protein Homology CDS 4186091 4186744 . - 0 ID=cds-WP_000178593.1;Parent=gene-CCO47_RS20470;Dbxref=GenBank:WP_000178593.1;Name=WP_000178593.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490503.1;locus_tag=CCO47_RS20470;product=DsbA family protein;protein_id=WP_000178593.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4186989 4187339 . - . ID=gene-CCO47_RS20475;Name=CCO47_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20475;old_locus_tag=CCO47_20475 NZ_CP075113.1 Protein Homology CDS 4186989 4187339 . - 0 ID=cds-WP_000135401.1;Parent=gene-CCO47_RS20475;Dbxref=GenBank:WP_000135401.1;Name=WP_000135401.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490504.1;locus_tag=CCO47_RS20475;product=helix-turn-helix domain-containing protein;protein_id=WP_000135401.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4187324 4187533 . - . ID=gene-CCO47_RS20480;Name=pefI;gbkey=Gene;gene=pefI;gene_biotype=protein_coding;locus_tag=CCO47_RS20480;old_locus_tag=CCO47_20480 NZ_CP075113.1 Protein Homology CDS 4187324 4187533 . - 0 ID=cds-WP_000504711.1;Parent=gene-CCO47_RS20480;Dbxref=GenBank:WP_000504711.1;Name=WP_000504711.1;gbkey=CDS;gene=pefI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490505.1;locus_tag=CCO47_RS20480;product=transcriptional regulator PefI;protein_id=WP_000504711.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4188110 4188925 . + . ID=gene-CCO47_RS20485;Name=CCO47_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20485;old_locus_tag=CCO47_20485 NZ_CP075113.1 Protein Homology CDS 4188110 4188925 . + 0 ID=cds-WP_000914538.1;Parent=gene-CCO47_RS20485;Dbxref=GenBank:WP_000914538.1;Name=WP_000914538.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001723051.1;locus_tag=CCO47_RS20485;product=AraC family transcriptional regulator;protein_id=WP_000914538.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4188959 4189405 . - . ID=gene-CCO47_RS20490;Name=sefD;gbkey=Gene;gene=sefD;gene_biotype=protein_coding;locus_tag=CCO47_RS20490;old_locus_tag=CCO47_20490 NZ_CP075113.1 Protein Homology CDS 4188959 4189405 . - 0 ID=cds-WP_001077813.1;Parent=gene-CCO47_RS20490;Dbxref=GenBank:WP_001077813.1;Name=WP_001077813.1;gbkey=CDS;gene=sefD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001077813.1;locus_tag=CCO47_RS20490;product=SEF18 fimbria major subunit SefD;protein_id=WP_001077813.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4189402 4191840 . - . ID=gene-CCO47_RS20495;Name=sefC;gbkey=Gene;gene=sefC;gene_biotype=protein_coding;locus_tag=CCO47_RS20495;old_locus_tag=CCO47_20495 NZ_CP075113.1 Protein Homology CDS 4189402 4191840 . - 0 ID=cds-WP_094912373.1;Parent=gene-CCO47_RS20495;Dbxref=GenBank:WP_094912373.1;Name=WP_094912373.1;gbkey=CDS;gene=sefC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505863.1;locus_tag=CCO47_RS20495;product=SEF14/SEF18 fimbria usher protein SefC;protein_id=WP_094912373.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4191857 4192597 . - . ID=gene-CCO47_RS20500;Name=sefB;gbkey=Gene;gene=sefB;gene_biotype=protein_coding;locus_tag=CCO47_RS20500;old_locus_tag=CCO47_20500 NZ_CP075113.1 Protein Homology CDS 4191857 4192597 . - 0 ID=cds-WP_001575372.1;Parent=gene-CCO47_RS20500;Dbxref=GenBank:WP_001575372.1;Name=WP_001575372.1;gbkey=CDS;gene=sefB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001746655.1;locus_tag=CCO47_RS20500;product=SEF14/SEF18 fimbria chaperone SefB;protein_id=WP_001575372.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4192719 4193216 . - . ID=gene-CCO47_RS20505;Name=sefA;gbkey=Gene;gene=sefA;gene_biotype=protein_coding;locus_tag=CCO47_RS20505;old_locus_tag=CCO47_20505 NZ_CP075113.1 Protein Homology CDS 4192719 4193216 . - 0 ID=cds-WP_001231942.1;Parent=gene-CCO47_RS20505;Dbxref=GenBank:WP_001231942.1;Name=WP_001231942.1;gbkey=CDS;gene=sefA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233254.1;locus_tag=CCO47_RS20505;product=SEF14 fimbria major subunit SefA;protein_id=WP_001231942.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4193572 4194705 . + . ID=gene-CCO47_RS20510;Name=CCO47_RS20510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS20510;old_locus_tag=CCO47_20510;pseudo=true NZ_CP075113.1 Protein Homology CDS 4193572 4194705 . + 0 ID=cds-CCO47_RS20510;Parent=gene-CCO47_RS20510;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=CCO47_RS20510;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4194737 4194877 . - . ID=gene-CCO47_RS20515;Name=CCO47_RS20515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS20515;old_locus_tag=CCO47_20515;partial=true;pseudo=true;start_range=.,4194737 NZ_CP075113.1 Protein Homology CDS 4194737 4194877 . - 0 ID=cds-CCO47_RS20515;Parent=gene-CCO47_RS20515;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008322911.1;locus_tag=CCO47_RS20515;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;start_range=.,4194737;transl_table=11 NZ_CP075113.1 RefSeq gene 4195283 4195591 . - . ID=gene-CCO47_RS20520;Name=CCO47_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20520;old_locus_tag=CCO47_20520 NZ_CP075113.1 Protein Homology CDS 4195283 4195591 . - 0 ID=cds-WP_001199743.1;Parent=gene-CCO47_RS20520;Dbxref=GenBank:WP_001199743.1;Name=WP_001199743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199743.1;locus_tag=CCO47_RS20520;product=CcdB family protein;protein_id=WP_001199743.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4195594 4195833 . - . ID=gene-CCO47_RS20525;Name=CCO47_RS20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20525;old_locus_tag=CCO47_20525 NZ_CP075113.1 Protein Homology CDS 4195594 4195833 . - 0 ID=cds-WP_001118105.1;Parent=gene-CCO47_RS20525;Dbxref=GenBank:WP_001118105.1;Name=WP_001118105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118105.1;locus_tag=CCO47_RS20525;product=type II toxin-antitoxin system CcdA family antitoxin;protein_id=WP_001118105.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4195942 4196190 . - . ID=gene-CCO47_RS20530;Name=CCO47_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20530;old_locus_tag=CCO47_20530 NZ_CP075113.1 Protein Homology CDS 4195942 4196190 . - 0 ID=cds-WP_000168389.1;Parent=gene-CCO47_RS20530;Dbxref=GenBank:WP_000168389.1;Name=WP_000168389.1;Ontology_term=GO:0006355,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168389.1;locus_tag=CCO47_RS20530;product=CopG family ribbon-helix-helix protein;protein_id=WP_000168389.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4196267 4196389 . - . ID=gene-CCO47_RS24505;Name=CCO47_RS24505;end_range=4196389,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24505;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 4196267 4196389 . - 0 ID=cds-CCO47_RS24505;Parent=gene-CCO47_RS24505;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4196389,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013364722.1;locus_tag=CCO47_RS24505;partial=true;product=DUF4942 domain-containing protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4196381 4196812 . - . ID=gene-CCO47_RS20535;Name=CCO47_RS20535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS20535;old_locus_tag=CCO47_20535;partial=true;pseudo=true;start_range=.,4196381 NZ_CP075113.1 Protein Homology CDS 4196381 4196812 . - 0 ID=cds-CCO47_RS20535;Parent=gene-CCO47_RS20535;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_039289737.1;locus_tag=CCO47_RS20535;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,4196381;transl_table=11 NZ_CP075113.1 RefSeq gene 4197262 4197346 . - . ID=gene-CCO47_RS20540;Name=CCO47_RS20540;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS20540;old_locus_tag=CCO47_20540 NZ_CP075113.1 tRNAscan-SE tRNA 4197262 4197346 . - . ID=rna-CCO47_RS20540;Parent=gene-CCO47_RS20540;anticodon=(pos:complement(4197310..4197312));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS20540;product=tRNA-Leu NZ_CP075113.1 tRNAscan-SE exon 4197262 4197346 . - . ID=exon-CCO47_RS20540-1;Parent=rna-CCO47_RS20540;anticodon=(pos:complement(4197310..4197312));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS20540;product=tRNA-Leu NZ_CP075113.1 RefSeq gene 4197569 4198588 . + . ID=gene-CCO47_RS20545;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=CCO47_RS20545;old_locus_tag=CCO47_20545 NZ_CP075113.1 Protein Homology CDS 4197569 4198588 . + 0 ID=cds-WP_000152558.1;Parent=gene-CCO47_RS20545;Dbxref=GenBank:WP_000152558.1;Name=WP_000152558.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=CCO47_RS20545;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_000152558.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4198616 4199146 . - . ID=gene-CCO47_RS20550;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=CCO47_RS20550;old_locus_tag=CCO47_20550 NZ_CP075113.1 Protein Homology CDS 4198616 4199146 . - 0 ID=cds-WP_000896758.1;Parent=gene-CCO47_RS20550;Dbxref=GenBank:WP_000896758.1;Name=WP_000896758.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463345.1;locus_tag=CCO47_RS20550;product=gluconokinase;protein_id=WP_000896758.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4199363 4200394 . + . ID=gene-CCO47_RS20555;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=CCO47_RS20555;old_locus_tag=CCO47_20555 NZ_CP075113.1 Protein Homology CDS 4199363 4200394 . + 0 ID=cds-WP_000453348.1;Parent=gene-CCO47_RS20555;Dbxref=GenBank:WP_000453348.1;Name=WP_000453348.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=CCO47_RS20555;product=L-idonate 5-dehydrogenase;protein_id=WP_000453348.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4200419 4201183 . + . ID=gene-CCO47_RS20560;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=CCO47_RS20560;old_locus_tag=CCO47_20560 NZ_CP075113.1 Protein Homology CDS 4200419 4201183 . + 0 ID=cds-WP_001061034.1;Parent=gene-CCO47_RS20560;Dbxref=GenBank:WP_001061034.1;Name=WP_001061034.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463343.1;locus_tag=CCO47_RS20560;product=gluconate 5-dehydrogenase;protein_id=WP_001061034.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4201245 4202564 . + . ID=gene-CCO47_RS20565;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=CCO47_RS20565;old_locus_tag=CCO47_20565 NZ_CP075113.1 Protein Homology CDS 4201245 4202564 . + 0 ID=cds-WP_001128356.1;Parent=gene-CCO47_RS20565;Dbxref=GenBank:WP_001128356.1;Name=WP_001128356.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=CCO47_RS20565;product=gnt-II system L-idonate transporter;protein_id=WP_001128356.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4202628 4203626 . + . ID=gene-CCO47_RS20570;Name=idnR;gbkey=Gene;gene=idnR;gene_biotype=protein_coding;gene_synonym=gntH,yjgS;locus_tag=CCO47_RS20570;old_locus_tag=CCO47_20570 NZ_CP075113.1 Protein Homology CDS 4202628 4203626 . + 0 ID=cds-WP_001244066.1;Parent=gene-CCO47_RS20570;Dbxref=GenBank:WP_001244066.1;Name=WP_001244066.1;Ontology_term=GO:0006355,GO:0019521,GO:0003700;gbkey=CDS;gene=idnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463341.1;locus_tag=CCO47_RS20570;product=DNA-binding transcriptional regulator IdnR;protein_id=WP_001244066.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4203821 4204903 . - . ID=gene-CCO47_RS20575;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=CCO47_RS20575;old_locus_tag=CCO47_20575 NZ_CP075113.1 Protein Homology CDS 4203821 4204903 . - 0 ID=cds-WP_001182242.1;Parent=gene-CCO47_RS20575;Dbxref=GenBank:WP_001182242.1;Name=WP_001182242.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=CCO47_RS20575;product=LPS export ABC transporter permease LptG;protein_id=WP_001182242.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4204903 4206003 . - . ID=gene-CCO47_RS20580;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=CCO47_RS20580;old_locus_tag=CCO47_20580 NZ_CP075113.1 Protein Homology CDS 4204903 4206003 . - 0 ID=cds-WP_000584132.1;Parent=gene-CCO47_RS20580;Dbxref=GenBank:WP_000584132.1;Name=WP_000584132.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463339.1;locus_tag=CCO47_RS20580;product=LPS export ABC transporter permease LptF;protein_id=WP_000584132.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4206067 4206117 . - . ID=gene-CCO47_RS20585;Name=CCO47_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20585;old_locus_tag=CCO47_20585 NZ_CP075113.1 Protein Homology CDS 4206067 4206117 . - 0 ID=cds-WP_212724070.1;Parent=gene-CCO47_RS20585;Dbxref=GenBank:WP_212724070.1;Name=WP_212724070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=CCO47_RS20585;product=hypothetical protein;protein_id=WP_212724070.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4206398 4207909 . + . ID=gene-CCO47_RS20590;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=CCO47_RS20590;old_locus_tag=CCO47_20590 NZ_CP075113.1 Protein Homology CDS 4206398 4207909 . + 0 ID=cds-WP_000397158.1;Parent=gene-CCO47_RS20590;Dbxref=GenBank:WP_000397158.1;Name=WP_000397158.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=CCO47_RS20590;product=leucyl aminopeptidase;protein_id=WP_000397158.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4208046 4208489 . + . ID=gene-CCO47_RS20595;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=CCO47_RS20595;old_locus_tag=CCO47_20595 NZ_CP075113.1 Protein Homology CDS 4208046 4208489 . + 0 ID=cds-WP_001523689.1;Parent=gene-CCO47_RS20595;Dbxref=GenBank:WP_001523689.1;Name=WP_001523689.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=CCO47_RS20595;product=DNA polymerase III subunit chi;protein_id=WP_001523689.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4208489 4211344 . + . ID=gene-CCO47_RS20600;Name=CCO47_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20600;old_locus_tag=CCO47_20600 NZ_CP075113.1 Protein Homology CDS 4208489 4211344 . + 0 ID=cds-WP_000416325.1;Parent=gene-CCO47_RS20600;Dbxref=GenBank:WP_000416325.1;Name=WP_000416325.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=CCO47_RS20600;product=valine--tRNA ligase;protein_id=WP_000416325.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4211486 4212672 . - . ID=gene-CCO47_RS20605;Name=CCO47_RS20605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS20605;old_locus_tag=CCO47_20605;pseudo=true NZ_CP075113.1 Protein Homology CDS 4211486 4212672 . - 0 ID=cds-CCO47_RS20605;Parent=gene-CCO47_RS20605;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017770.7;locus_tag=CCO47_RS20605;product=YjgN family protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 4212867 4213370 . + . ID=gene-CCO47_RS20610;Name=CCO47_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20610;old_locus_tag=CCO47_20610 NZ_CP075113.1 Protein Homology CDS 4212867 4213370 . + 0 ID=cds-WP_001519079.1;Parent=gene-CCO47_RS20610;Dbxref=GenBank:WP_001519079.1;Name=WP_001519079.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=CCO47_RS20610;product=GNAT family N-acetyltransferase;protein_id=WP_001519079.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4213477 4213965 . + . ID=gene-CCO47_RS20615;Name=CCO47_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20615;old_locus_tag=CCO47_20615 NZ_CP075113.1 Protein Homology CDS 4213477 4213965 . + 0 ID=cds-WP_000826193.1;Parent=gene-CCO47_RS20615;Dbxref=GenBank:WP_000826193.1;Name=WP_000826193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463332.1;locus_tag=CCO47_RS20615;product=DUF3617 domain-containing protein;protein_id=WP_000826193.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4214199 4215011 . - . ID=gene-CCO47_RS20620;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=CCO47_RS20620;old_locus_tag=CCO47_20620 NZ_CP075113.1 Protein Homology CDS 4214199 4215011 . - 0 ID=cds-WP_000218463.1;Parent=gene-CCO47_RS20620;Dbxref=GenBank:WP_000218463.1;Name=WP_000218463.1;Ontology_term=GO:0006400,GO:0004497,GO:0045301,GO:0046872;gbkey=CDS;gene=miaE;go_function=monooxygenase activity|0004497||IEA,tRNA 2-(methylsulfanyl)-N(6)-isopentenyladenosine(37) hydroxylase activity|0045301||IEA,metal ion binding|0046872||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463331.1;locus_tag=CCO47_RS20620;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=WP_000218463.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4215023 4215439 . - . ID=gene-CCO47_RS20625;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=CCO47_RS20625;old_locus_tag=CCO47_20625 NZ_CP075113.1 Protein Homology CDS 4215023 4215439 . - 0 ID=cds-WP_000002940.1;Parent=gene-CCO47_RS20625;Dbxref=GenBank:WP_000002940.1;Name=WP_000002940.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463330.1;locus_tag=CCO47_RS20625;product=ribonuclease E inhibitor RraB;protein_id=WP_000002940.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4215540 4215635 . + . ID=gene-CCO47_RS24510;Name=argL;gbkey=Gene;gene=argL;gene_biotype=protein_coding;locus_tag=CCO47_RS24510 NZ_CP075113.1 Protein Homology CDS 4215540 4215635 . + 0 ID=cds-WP_223148976.1;Parent=gene-CCO47_RS24510;Dbxref=GenBank:WP_223148976.1;Name=WP_223148976.1;gbkey=CDS;gene=argL;inference=COORDINATES: protein motif:HMM:NF047283.3;locus_tag=CCO47_RS24510;product=putative translational regulatory protein ArgL;protein_id=WP_223148976.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4215605 4216609 . + . ID=gene-CCO47_RS20630;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CCO47_RS20630;old_locus_tag=CCO47_20630 NZ_CP075113.1 Protein Homology CDS 4215605 4216609 . + 0 ID=cds-WP_000103033.1;Parent=gene-CCO47_RS20630;Dbxref=GenBank:WP_000103033.1;Name=WP_000103033.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463329.1;locus_tag=CCO47_RS20630;product=ornithine carbamoyltransferase;protein_id=WP_000103033.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4216683 4217135 . - . ID=gene-CCO47_RS20635;Name=CCO47_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20635;old_locus_tag=CCO47_20635 NZ_CP075113.1 Protein Homology CDS 4216683 4217135 . - 0 ID=cds-WP_000583452.1;Parent=gene-CCO47_RS20635;Dbxref=GenBank:WP_000583452.1;Name=WP_000583452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463328.1;locus_tag=CCO47_RS20635;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000583452.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4217811 4219031 . + . ID=gene-CCO47_RS20640;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=CCO47_RS20640;old_locus_tag=CCO47_20640 NZ_CP075113.1 Protein Homology CDS 4217811 4219031 . + 0 ID=cds-WP_000410844.1;Parent=gene-CCO47_RS20640;Dbxref=GenBank:WP_000410844.1;Name=WP_000410844.1;Ontology_term=GO:0006527,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=CCO47_RS20640;product=arginine deiminase;protein_id=WP_000410844.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4219042 4219947 . + . ID=gene-CCO47_RS20645;Name=CCO47_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20645;old_locus_tag=CCO47_20645 NZ_CP075113.1 Protein Homology CDS 4219042 4219947 . + 0 ID=cds-WP_094912371.1;Parent=gene-CCO47_RS20645;Dbxref=GenBank:WP_094912371.1;Name=WP_094912371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=CCO47_RS20645;product=carbamate kinase;protein_id=WP_094912371.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4220059 4221063 . + . ID=gene-CCO47_RS20650;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CCO47_RS20650;old_locus_tag=CCO47_20650 NZ_CP075113.1 Protein Homology CDS 4220059 4221063 . + 0 ID=cds-WP_000237037.1;Parent=gene-CCO47_RS20650;Dbxref=GenBank:WP_000237037.1;Name=WP_000237037.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=CCO47_RS20650;product=ornithine carbamoyltransferase;protein_id=WP_000237037.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4221119 4222522 . + . ID=gene-CCO47_RS20655;Name=CCO47_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20655;old_locus_tag=CCO47_20655 NZ_CP075113.1 Protein Homology CDS 4221119 4222522 . + 0 ID=cds-WP_000514419.1;Parent=gene-CCO47_RS20655;Dbxref=GenBank:WP_000514419.1;Name=WP_000514419.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463324.1;locus_tag=CCO47_RS20655;product=YfcC family protein;protein_id=WP_000514419.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4222709 4223197 . + . ID=gene-CCO47_RS20660;Name=CCO47_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20660;old_locus_tag=CCO47_20660 NZ_CP075113.1 Protein Homology CDS 4222709 4223197 . + 0 ID=cds-WP_000666051.1;Parent=gene-CCO47_RS20660;Dbxref=GenBank:WP_000666051.1;Name=WP_000666051.1;Ontology_term=GO:1900079,GO:0003677,GO:0003700,GO:0034618;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of arginine biosynthetic process|1900079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463323.1;locus_tag=CCO47_RS20660;product=arginine repressor;protein_id=WP_000666051.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4223167 4223308 . - . ID=gene-CCO47_RS20665;Name=CCO47_RS20665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS20665;old_locus_tag=CCO47_20665;pseudo=true NZ_CP075113.1 Protein Homology CDS 4223167 4223308 . - 0 ID=cds-CCO47_RS20665;Parent=gene-CCO47_RS20665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=CCO47_RS20665;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 4223288 4223389 . + . ID=gene-CCO47_RS20670;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=CCO47_RS20670;old_locus_tag=CCO47_20670 NZ_CP075113.1 Protein Homology CDS 4223288 4223389 . + 0 ID=cds-WP_000249504.1;Parent=gene-CCO47_RS20670;Dbxref=GenBank:WP_000249504.1;Name=WP_000249504.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=CCO47_RS20670;product=pyr operon leader peptide;protein_id=WP_000249504.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4223425 4224360 . + . ID=gene-CCO47_RS20675;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=CCO47_RS20675;old_locus_tag=CCO47_20675 NZ_CP075113.1 Protein Homology CDS 4223425 4224360 . + 0 ID=cds-WP_000013060.1;Parent=gene-CCO47_RS20675;Dbxref=GenBank:WP_000013060.1;Name=WP_000013060.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463320.1;locus_tag=CCO47_RS20675;product=aspartate carbamoyltransferase;protein_id=WP_000013060.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4224373 4224834 . + . ID=gene-CCO47_RS20680;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=CCO47_RS20680;old_locus_tag=CCO47_20680 NZ_CP075113.1 Protein Homology CDS 4224373 4224834 . + 0 ID=cds-WP_000148567.1;Parent=gene-CCO47_RS20680;Dbxref=GenBank:WP_000148567.1;Name=WP_000148567.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=CCO47_RS20680;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148567.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4224911 4225297 . + . ID=gene-CCO47_RS20685;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=CCO47_RS20685;old_locus_tag=CCO47_20685 NZ_CP075113.1 Protein Homology CDS 4224911 4225297 . + 0 ID=cds-WP_000047544.1;Parent=gene-CCO47_RS20685;Dbxref=GenBank:WP_000047544.1;Name=WP_000047544.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=CCO47_RS20685;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047544.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4225372 4225818 . + . ID=gene-CCO47_RS20690;Name=CCO47_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20690;old_locus_tag=CCO47_20690 NZ_CP075113.1 Protein Homology CDS 4225372 4225818 . + 0 ID=cds-WP_000252560.1;Parent=gene-CCO47_RS20690;Dbxref=GenBank:WP_000252560.1;Name=WP_000252560.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463317.1;locus_tag=CCO47_RS20690;product=transposase;protein_id=WP_000252560.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4225934 4228642 . - . ID=gene-CCO47_RS20695;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=CCO47_RS20695;old_locus_tag=CCO47_20695 NZ_CP075113.1 Protein Homology CDS 4225934 4228642 . - 0 ID=cds-WP_000920870.1;Parent=gene-CCO47_RS20695;Dbxref=GenBank:WP_000920870.1;Name=WP_000920870.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=CCO47_RS20695;product=magnesium-translocating P-type ATPase;protein_id=WP_000920870.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4228783 4228881 . - . ID=gene-CCO47_RS24515;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=CCO47_RS24515;old_locus_tag=CCO47_20700 NZ_CP075113.1 Protein Homology CDS 4228783 4228881 . - 0 ID=cds-WP_105789234.1;Parent=gene-CCO47_RS24515;Dbxref=GenBank:WP_105789234.1;Name=WP_105789234.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: protein motif:HMM:NF028369.6;locus_tag=CCO47_RS24515;product=mgtA regulatory leader peptide MgtL;protein_id=WP_105789234.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4229026 4229973 . + . ID=gene-CCO47_RS20705;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=CCO47_RS20705;old_locus_tag=CCO47_20705 NZ_CP075113.1 Protein Homology CDS 4229026 4229973 . + 0 ID=cds-WP_001181297.1;Parent=gene-CCO47_RS20705;Dbxref=GenBank:WP_001181297.1;Name=WP_001181297.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463315.1;locus_tag=CCO47_RS20705;product=trehalose operon repressor TreR;protein_id=WP_001181297.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4230111 4231529 . + . ID=gene-CCO47_RS20710;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=CCO47_RS20710;old_locus_tag=CCO47_20710 NZ_CP075113.1 Protein Homology CDS 4230111 4231529 . + 0 ID=cds-WP_000048833.1;Parent=gene-CCO47_RS20710;Dbxref=GenBank:WP_000048833.1;Name=WP_000048833.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=CCO47_RS20710;product=PTS trehalose transporter subunit IIBC;protein_id=WP_000048833.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4231579 4233231 . + . ID=gene-CCO47_RS20715;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=CCO47_RS20715;old_locus_tag=CCO47_20715 NZ_CP075113.1 Protein Homology CDS 4231579 4233231 . + 0 ID=cds-WP_000155061.1;Parent=gene-CCO47_RS20715;Dbxref=GenBank:WP_000155061.1;Name=WP_000155061.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463314.1;locus_tag=CCO47_RS20715;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_000155061.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4233640 4235778 . + . ID=gene-CCO47_RS20720;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=CCO47_RS20720;old_locus_tag=CCO47_20720 NZ_CP075113.1 Protein Homology CDS 4233640 4235778 . + 0 ID=cds-WP_000187818.1;Parent=gene-CCO47_RS20720;Dbxref=GenBank:WP_000187818.1;Name=WP_000187818.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=CCO47_RS20720;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000187818.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4235995 4236459 . + . ID=gene-CCO47_RS20725;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=CCO47_RS20725;old_locus_tag=CCO47_20725 NZ_CP075113.1 Protein Homology CDS 4235995 4236459 . + 0 ID=cds-WP_001009173.1;Parent=gene-CCO47_RS20725;Dbxref=GenBank:WP_001009173.1;Name=WP_001009173.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=CCO47_RS20725;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_001009173.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4236463 4236747 . - . ID=gene-CCO47_RS20730;Name=CCO47_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20730;old_locus_tag=CCO47_20730 NZ_CP075113.1 Protein Homology CDS 4236463 4236747 . - 0 ID=cds-WP_000220574.1;Parent=gene-CCO47_RS20730;Dbxref=GenBank:WP_000220574.1;Name=WP_000220574.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463311.1;locus_tag=CCO47_RS20730;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000220574.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4236737 4236979 . - . ID=gene-CCO47_RS20735;Name=CCO47_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20735;old_locus_tag=CCO47_20735 NZ_CP075113.1 Protein Homology CDS 4236737 4236979 . - 0 ID=cds-WP_000212724.1;Parent=gene-CCO47_RS20735;Dbxref=GenBank:WP_000212724.1;Name=WP_000212724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463310.1;locus_tag=CCO47_RS20735;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_000212724.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4237057 4238970 . - . ID=gene-CCO47_RS20740;Name=CCO47_RS20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20740;old_locus_tag=CCO47_20740 NZ_CP075113.1 Protein Homology CDS 4237057 4238970 . - 0 ID=cds-WP_001212138.1;Parent=gene-CCO47_RS20740;Dbxref=GenBank:WP_001212138.1;Name=WP_001212138.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463309.1;locus_tag=CCO47_RS20740;product=BglG family transcription antiterminator;protein_id=WP_001212138.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4238987 4239727 . - . ID=gene-CCO47_RS20745;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=CCO47_RS20745;old_locus_tag=CCO47_20745 NZ_CP075113.1 Protein Homology CDS 4238987 4239727 . - 0 ID=cds-WP_000779259.1;Parent=gene-CCO47_RS20745;Dbxref=GenBank:WP_000779259.1;Name=WP_000779259.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463308.2;locus_tag=CCO47_RS20745;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000779259.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4239724 4240842 . - . ID=gene-CCO47_RS20750;Name=CCO47_RS20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20750;old_locus_tag=CCO47_20750 NZ_CP075113.1 Protein Homology CDS 4239724 4240842 . - 0 ID=cds-WP_001139169.1;Parent=gene-CCO47_RS20750;Dbxref=GenBank:WP_001139169.1;Name=WP_001139169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463307.1;locus_tag=CCO47_RS20750;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WP_001139169.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4240826 4241959 . - . ID=gene-CCO47_RS20755;Name=CCO47_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20755;old_locus_tag=CCO47_20755 NZ_CP075113.1 Protein Homology CDS 4240826 4241959 . - 0 ID=cds-WP_000459958.1;Parent=gene-CCO47_RS20755;Dbxref=GenBank:WP_000459958.1;Name=WP_000459958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463306.1;locus_tag=CCO47_RS20755;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WP_000459958.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4242018 4242662 . - . ID=gene-CCO47_RS20760;Name=CCO47_RS20760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20760;old_locus_tag=CCO47_20760 NZ_CP075113.1 Protein Homology CDS 4242018 4242662 . - 0 ID=cds-WP_000392127.1;Parent=gene-CCO47_RS20760;Dbxref=GenBank:WP_000392127.1;Name=WP_000392127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463305.1;locus_tag=CCO47_RS20760;product=DUF4310 family protein;protein_id=WP_000392127.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4242674 4243450 . - . ID=gene-CCO47_RS20765;Name=CCO47_RS20765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20765;old_locus_tag=CCO47_20765 NZ_CP075113.1 Protein Homology CDS 4242674 4243450 . - 0 ID=cds-WP_000478573.1;Parent=gene-CCO47_RS20765;Dbxref=GenBank:WP_000478573.1;Name=WP_000478573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463304.1;locus_tag=CCO47_RS20765;product=DUF4311 domain-containing protein;protein_id=WP_000478573.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4243473 4243775 . - . ID=gene-CCO47_RS20770;Name=CCO47_RS20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20770;old_locus_tag=CCO47_20770 NZ_CP075113.1 Protein Homology CDS 4243473 4243775 . - 0 ID=cds-WP_000975187.1;Parent=gene-CCO47_RS20770;Dbxref=GenBank:WP_000975187.1;Name=WP_000975187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463303.1;locus_tag=CCO47_RS20770;product=DUF4312 family protein;protein_id=WP_000975187.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4243775 4244137 . - . ID=gene-CCO47_RS20775;Name=CCO47_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20775;old_locus_tag=CCO47_20775 NZ_CP075113.1 Protein Homology CDS 4243775 4244137 . - 0 ID=cds-WP_000435389.1;Parent=gene-CCO47_RS20775;Dbxref=GenBank:WP_000435389.1;Name=WP_000435389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=CCO47_RS20775;product=SFCGS family glycine-rich protein;protein_id=WP_000435389.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4244148 4244486 . - . ID=gene-CCO47_RS20780;Name=CCO47_RS20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20780;old_locus_tag=CCO47_20780 NZ_CP075113.1 Protein Homology CDS 4244148 4244486 . - 0 ID=cds-WP_001255104.1;Parent=gene-CCO47_RS20780;Dbxref=GenBank:WP_001255104.1;Name=WP_001255104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463301.1;locus_tag=CCO47_RS20780;product=glycine dehydrogenase;protein_id=WP_001255104.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4244764 4245150 . - . ID=gene-CCO47_RS20785;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=CCO47_RS20785;old_locus_tag=CCO47_20785 NZ_CP075113.1 Protein Homology CDS 4244764 4245150 . - 0 ID=cds-WP_001232231.1;Parent=gene-CCO47_RS20785;Dbxref=GenBank:WP_001232231.1;Name=WP_001232231.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463300.1;locus_tag=CCO47_RS20785;product=cytochrome b562;protein_id=WP_001232231.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4245249 4246601 . - . ID=gene-CCO47_RS20790;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=CCO47_RS20790;old_locus_tag=CCO47_20790 NZ_CP075113.1 Protein Homology CDS 4245249 4246601 . - 0 ID=cds-WP_000852994.1;Parent=gene-CCO47_RS20790;Dbxref=GenBank:WP_000852994.1;Name=WP_000852994.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=CCO47_RS20790;product=metalloprotease PmbA;protein_id=WP_000852994.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4246697 4247248 . + . ID=gene-CCO47_RS20795;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=CCO47_RS20795;old_locus_tag=CCO47_20795 NZ_CP075113.1 Protein Homology CDS 4246697 4247248 . + 0 ID=cds-WP_000166287.1;Parent=gene-CCO47_RS20795;Dbxref=GenBank:WP_000166287.1;Name=WP_000166287.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463298.1;locus_tag=CCO47_RS20795;product=ribosome biogenesis factor YjgA;protein_id=WP_000166287.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4247355 4248728 . - . ID=gene-CCO47_RS20800;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=CCO47_RS20800;old_locus_tag=CCO47_20800 NZ_CP075113.1 Protein Homology CDS 4247355 4248728 . - 0 ID=cds-WP_001219850.1;Parent=gene-CCO47_RS20800;Dbxref=GenBank:WP_001219850.1;Name=WP_001219850.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001219850.1;locus_tag=CCO47_RS20800;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_001219850.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4248903 4249901 . + . ID=gene-CCO47_RS20805;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=CCO47_RS20805;old_locus_tag=CCO47_20805 NZ_CP075113.1 Protein Homology CDS 4248903 4249901 . + 0 ID=cds-WP_000853764.1;Parent=gene-CCO47_RS20805;Dbxref=GenBank:WP_000853764.1;Name=WP_000853764.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=CCO47_RS20805;product=class 1 fructose-bisphosphatase;protein_id=WP_000853764.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4250128 4250658 . + . ID=gene-CCO47_RS20810;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=CCO47_RS20810;old_locus_tag=CCO47_20810 NZ_CP075113.1 Protein Homology CDS 4250128 4250658 . + 0 ID=cds-WP_000055079.1;Parent=gene-CCO47_RS20810;Dbxref=GenBank:WP_000055079.1;Name=WP_000055079.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=CCO47_RS20810;product=inorganic diphosphatase;protein_id=WP_000055079.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4251068 4252231 . + . ID=gene-CCO47_RS20815;Name=CCO47_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20815;old_locus_tag=CCO47_20815 NZ_CP075113.1 Protein Homology CDS 4251068 4252231 . + 0 ID=cds-WP_000977207.1;Parent=gene-CCO47_RS20815;Dbxref=GenBank:WP_000977207.1;Name=WP_000977207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=CCO47_RS20815;product=metallo-dependent hydrolase;protein_id=WP_000977207.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4252228 4253436 . + . ID=gene-CCO47_RS20820;Name=CCO47_RS20820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS20820;old_locus_tag=CCO47_20820;pseudo=true NZ_CP075113.1 Protein Homology CDS 4252228 4253436 . + 0 ID=cds-CCO47_RS20820;Parent=gene-CCO47_RS20820;Note=internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463273.1;locus_tag=CCO47_RS20820;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 4253490 4253834 . - . ID=gene-CCO47_RS20825;Name=CCO47_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20825;old_locus_tag=CCO47_20825 NZ_CP075113.1 Protein Homology CDS 4253490 4253834 . - 0 ID=cds-WP_001219167.1;Parent=gene-CCO47_RS20825;Dbxref=GenBank:WP_001219167.1;Name=WP_001219167.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463272.1;locus_tag=CCO47_RS20825;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_001219167.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4253837 4257616 . - . ID=gene-CCO47_RS20830;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=CCO47_RS20830;old_locus_tag=CCO47_20830 NZ_CP075113.1 Protein Homology CDS 4253837 4257616 . - 0 ID=cds-WP_000060818.1;Parent=gene-CCO47_RS20830;Dbxref=GenBank:WP_000060818.1;Name=WP_000060818.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=CCO47_RS20830;product=autotransporter assembly complex protein TamB;protein_id=WP_000060818.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4257613 4259346 . - . ID=gene-CCO47_RS20835;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=CCO47_RS20835;old_locus_tag=CCO47_20835 NZ_CP075113.1 Protein Homology CDS 4257613 4259346 . - 0 ID=cds-WP_001120230.1;Parent=gene-CCO47_RS20835;Dbxref=GenBank:WP_001120230.1;Name=WP_001120230.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463270.1;locus_tag=CCO47_RS20835;product=autotransporter assembly complex protein TamA;protein_id=WP_001120230.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4259559 4260197 . + . ID=gene-CCO47_RS20840;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=CCO47_RS20840;old_locus_tag=CCO47_20840 NZ_CP075113.1 Protein Homology CDS 4259559 4260197 . + 0 ID=cds-WP_000051467.1;Parent=gene-CCO47_RS20840;Dbxref=GenBank:WP_000051467.1;Name=WP_000051467.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463269.1;locus_tag=CCO47_RS20840;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_000051467.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4260380 4261723 . + . ID=gene-CCO47_RS20845;Name=paeA;gbkey=Gene;gene=paeA;gene_biotype=protein_coding;gene_synonym=ytfL;locus_tag=CCO47_RS20845;old_locus_tag=CCO47_20845 NZ_CP075113.1 Protein Homology CDS 4260380 4261723 . + 0 ID=cds-WP_000934974.1;Parent=gene-CCO47_RS20845;Dbxref=GenBank:WP_000934974.1;Name=WP_000934974.1;Ontology_term=GO:0050660;gbkey=CDS;gene=paeA;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463268.1;locus_tag=CCO47_RS20845;product=polyamine export protein PaeA;protein_id=WP_000934974.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4261808 4262014 . - . ID=gene-CCO47_RS20850;Name=CCO47_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20850;old_locus_tag=CCO47_20850 NZ_CP075113.1 Protein Homology CDS 4261808 4262014 . - 0 ID=cds-WP_000689229.1;Parent=gene-CCO47_RS20850;Dbxref=GenBank:WP_000689229.1;Name=WP_000689229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=CCO47_RS20850;product=DUF1107 domain-containing protein;protein_id=WP_000689229.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4262341 4262898 . + . ID=gene-CCO47_RS20855;Name=CCO47_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20855;old_locus_tag=CCO47_20855 NZ_CP075113.1 Protein Homology CDS 4262341 4262898 . + 0 ID=cds-WP_000175300.1;Parent=gene-CCO47_RS20855;Dbxref=GenBank:WP_000175300.1;Name=WP_000175300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463266.1;locus_tag=CCO47_RS20855;product=YtfJ family protein;protein_id=WP_000175300.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4262888 4263628 . - . ID=gene-CCO47_RS20860;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=CCO47_RS20860;old_locus_tag=CCO47_20860 NZ_CP075113.1 Protein Homology CDS 4262888 4263628 . - 0 ID=cds-WP_000893398.1;Parent=gene-CCO47_RS20860;Dbxref=GenBank:WP_000893398.1;Name=WP_000893398.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=CCO47_RS20860;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000893398.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4263896 4265839 . + . ID=gene-CCO47_RS20865;Name=CCO47_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20865;old_locus_tag=CCO47_20865 NZ_CP075113.1 Protein Homology CDS 4263896 4265839 . + 0 ID=cds-WP_000589384.1;Parent=gene-CCO47_RS20865;Dbxref=GenBank:WP_000589384.1;Name=WP_000589384.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=CCO47_RS20865;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_000589384.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4265897 4266283 . - . ID=gene-CCO47_RS20870;Name=CCO47_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20870;old_locus_tag=CCO47_20870 NZ_CP075113.1 Protein Homology CDS 4265897 4266283 . - 0 ID=cds-WP_001201297.1;Parent=gene-CCO47_RS20870;Dbxref=GenBank:WP_001201297.1;Name=WP_001201297.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463263.1;locus_tag=CCO47_RS20870;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_001201297.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4266371 4267219 . + . ID=gene-CCO47_RS20875;Name=CCO47_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20875;old_locus_tag=CCO47_20875 NZ_CP075113.1 Protein Homology CDS 4266371 4267219 . + 0 ID=cds-WP_000560612.1;Parent=gene-CCO47_RS20875;Dbxref=GenBank:WP_000560612.1;Name=WP_000560612.1;Ontology_term=GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463262.1;locus_tag=CCO47_RS20875;product=SDR family oxidoreductase;protein_id=WP_000560612.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4267300 4268265 . + . ID=gene-CCO47_RS20880;Name=CCO47_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20880;old_locus_tag=CCO47_20880 NZ_CP075113.1 Protein Homology CDS 4267300 4268265 . + 0 ID=cds-WP_000623274.1;Parent=gene-CCO47_RS20880;Dbxref=GenBank:WP_000623274.1;Name=WP_000623274.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463261.1;locus_tag=CCO47_RS20880;product=DMT family transporter;protein_id=WP_000623274.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4268368 4269030 . + . ID=gene-CCO47_RS20885;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=CCO47_RS20885;old_locus_tag=CCO47_20885 NZ_CP075113.1 Protein Homology CDS 4268368 4269030 . + 0 ID=cds-WP_000331471.1;Parent=gene-CCO47_RS20885;Dbxref=GenBank:WP_000331471.1;Name=WP_000331471.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463260.1;locus_tag=CCO47_RS20885;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331471.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4269097 4270485 . - . ID=gene-CCO47_RS20890;Name=CCO47_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20890;old_locus_tag=CCO47_20890 NZ_CP075113.1 Protein Homology CDS 4269097 4270485 . - 0 ID=cds-WP_000944340.1;Parent=gene-CCO47_RS20890;Dbxref=GenBank:WP_000944340.1;Name=WP_000944340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000944334.1;locus_tag=CCO47_RS20890;product=hypothetical protein;protein_id=WP_000944340.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4270500 4271639 . - . ID=gene-CCO47_RS20895;Name=CCO47_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20895;old_locus_tag=CCO47_20895 NZ_CP075113.1 Protein Homology CDS 4270500 4271639 . - 0 ID=cds-WP_000155543.1;Parent=gene-CCO47_RS20895;Dbxref=GenBank:WP_000155543.1;Name=WP_000155543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155541.1;locus_tag=CCO47_RS20895;product=DKNYY domain-containing protein;protein_id=WP_000155543.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4271977 4273380 . - . ID=gene-CCO47_RS20900;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=CCO47_RS20900;old_locus_tag=CCO47_20900 NZ_CP075113.1 Protein Homology CDS 4271977 4273380 . - 0 ID=cds-WP_000228321.1;Parent=gene-CCO47_RS20900;Dbxref=GenBank:WP_000228321.1;Name=WP_000228321.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541380.1;locus_tag=CCO47_RS20900;product=D-serine/D-alanine/glycine transporter;protein_id=WP_000228321.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4273676 4274296 . - . ID=gene-CCO47_RS20905;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=CCO47_RS20905;old_locus_tag=CCO47_20905 NZ_CP075113.1 Protein Homology CDS 4273676 4274296 . - 0 ID=cds-WP_000235161.1;Parent=gene-CCO47_RS20905;Dbxref=GenBank:WP_000235161.1;Name=WP_000235161.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=CCO47_RS20905;product=BamJ family beta-barrel-assembly machinery protein;protein_id=WP_000235161.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4274516 4275151 . + . ID=gene-CCO47_RS20910;Name=CCO47_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20910;old_locus_tag=CCO47_20910 NZ_CP075113.1 Protein Homology CDS 4274516 4275151 . + 0 ID=cds-WP_001119448.1;Parent=gene-CCO47_RS20910;Dbxref=GenBank:WP_001119448.1;Name=WP_001119448.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463257.1;locus_tag=CCO47_RS20910;product=OapA family protein;protein_id=WP_001119448.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4275201 4276127 . - . ID=gene-CCO47_RS20915;Name=CCO47_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20915;old_locus_tag=CCO47_20915 NZ_CP075113.1 Protein Homology CDS 4275201 4276127 . - 0 ID=cds-WP_000381075.1;Parent=gene-CCO47_RS20915;Dbxref=GenBank:WP_000381075.1;Name=WP_000381075.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=CCO47_RS20915;product=DMT family transporter;protein_id=WP_000381075.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4276275 4276724 . - . ID=gene-CCO47_RS20920;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=CCO47_RS20920;old_locus_tag=CCO47_20920 NZ_CP075113.1 Protein Homology CDS 4276275 4276724 . - 0 ID=cds-WP_001196059.1;Parent=gene-CCO47_RS20920;Dbxref=GenBank:WP_001196059.1;Name=WP_001196059.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=CCO47_RS20920;product=50S ribosomal protein L9;protein_id=WP_001196059.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4276766 4276993 . - . ID=gene-CCO47_RS20925;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=CCO47_RS20925;old_locus_tag=CCO47_20925 NZ_CP075113.1 Protein Homology CDS 4276766 4276993 . - 0 ID=cds-WP_000135199.1;Parent=gene-CCO47_RS20925;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=CCO47_RS20925;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4276998 4277312 . - . ID=gene-CCO47_RS20930;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=CCO47_RS20930;old_locus_tag=CCO47_20930 NZ_CP075113.1 Protein Homology CDS 4276998 4277312 . - 0 ID=cds-WP_001519453.1;Parent=gene-CCO47_RS20930;Dbxref=GenBank:WP_001519453.1;Name=WP_001519453.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463253.1;locus_tag=CCO47_RS20930;product=primosomal replication protein N;protein_id=WP_001519453.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4277319 4277714 . - . ID=gene-CCO47_RS20935;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=CCO47_RS20935;old_locus_tag=CCO47_20935 NZ_CP075113.1 Protein Homology CDS 4277319 4277714 . - 0 ID=cds-WP_001216671.1;Parent=gene-CCO47_RS20935;Dbxref=GenBank:WP_001216671.1;Name=WP_001216671.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=CCO47_RS20935;product=30S ribosomal protein S6;protein_id=WP_001216671.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4277785 4277990 . - . ID=gene-CCO47_RS24310;Name=CCO47_RS24310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24310;pseudo=true NZ_CP075113.1 Protein Homology CDS 4277785 4277990 . - 0 ID=cds-CCO47_RS24310;Parent=gene-CCO47_RS24310;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463251.1;locus_tag=CCO47_RS24310;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 4278184 4278459 . + . ID=gene-CCO47_RS20940;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=CCO47_RS20940;old_locus_tag=CCO47_20940 NZ_CP075113.1 Protein Homology CDS 4278184 4278459 . + 0 ID=cds-WP_001675399.1;Parent=gene-CCO47_RS20940;Dbxref=GenBank:WP_001675399.1;Name=WP_001675399.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463250.1;locus_tag=CCO47_RS20940;product=DUF1471 family protein YjfY;protein_id=WP_001675399.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4278588 4279274 . - . ID=gene-CCO47_RS20945;Name=CCO47_RS20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS20945;old_locus_tag=CCO47_20945 NZ_CP075113.1 Protein Homology CDS 4278588 4279274 . - 0 ID=cds-WP_001170769.1;Parent=gene-CCO47_RS20945;Dbxref=GenBank:WP_001170769.1;Name=WP_001170769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463249.1;locus_tag=CCO47_RS20945;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_001170769.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4279274 4280128 . - . ID=gene-CCO47_RS20950;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=CCO47_RS20950;old_locus_tag=CCO47_20950 NZ_CP075113.1 Protein Homology CDS 4279274 4280128 . - 0 ID=cds-WP_000949530.1;Parent=gene-CCO47_RS20950;Dbxref=GenBank:WP_000949530.1;Name=WP_000949530.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463248.1;locus_tag=CCO47_RS20950;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_000949530.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4280138 4280788 . - . ID=gene-CCO47_RS20955;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=CCO47_RS20955;old_locus_tag=CCO47_20955 NZ_CP075113.1 Protein Homology CDS 4280138 4280788 . - 0 ID=cds-WP_000056761.1;Parent=gene-CCO47_RS20955;Dbxref=GenBank:WP_000056761.1;Name=WP_000056761.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463247.1;locus_tag=CCO47_RS20955;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000056761.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4280802 4281266 . - . ID=gene-CCO47_RS20960;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=CCO47_RS20960;old_locus_tag=CCO47_20960 NZ_CP075113.1 Protein Homology CDS 4280802 4281266 . - 0 ID=cds-WP_000776531.1;Parent=gene-CCO47_RS20960;Dbxref=GenBank:WP_000776531.1;Name=WP_000776531.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463246.1;locus_tag=CCO47_RS20960;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776531.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4281276 4281581 . - . ID=gene-CCO47_RS20965;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=CCO47_RS20965;old_locus_tag=CCO47_20965 NZ_CP075113.1 Protein Homology CDS 4281276 4281581 . - 0 ID=cds-WP_000218362.1;Parent=gene-CCO47_RS20965;Dbxref=GenBank:WP_000218362.1;Name=WP_000218362.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313197.1;locus_tag=CCO47_RS20965;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218362.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4281597 4282994 . - . ID=gene-CCO47_RS20970;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=CCO47_RS20970;old_locus_tag=CCO47_20970 NZ_CP075113.1 Protein Homology CDS 4281597 4282994 . - 0 ID=cds-WP_000404873.1;Parent=gene-CCO47_RS20970;Dbxref=GenBank:WP_000404873.1;Name=WP_000404873.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=CCO47_RS20970;product=PTS ascorbate transporter subunit IIC;protein_id=WP_000404873.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4283357 4284421 . + . ID=gene-CCO47_RS20975;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=CCO47_RS20975;old_locus_tag=CCO47_20975 NZ_CP075113.1 Protein Homology CDS 4283357 4284421 . + 0 ID=cds-WP_000049161.1;Parent=gene-CCO47_RS20975;Dbxref=GenBank:WP_000049161.1;Name=WP_000049161.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=CCO47_RS20975;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_000049161.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4284526 4285281 . + . ID=gene-CCO47_RS20980;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=CCO47_RS20980;old_locus_tag=CCO47_20980 NZ_CP075113.1 Protein Homology CDS 4284526 4285281 . + 0 ID=cds-WP_000133618.1;Parent=gene-CCO47_RS20980;Dbxref=GenBank:WP_000133618.1;Name=WP_000133618.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463242.1;locus_tag=CCO47_RS20980;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133618.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4285278 4286027 . - . ID=gene-CCO47_RS20985;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=CCO47_RS20985;old_locus_tag=CCO47_20985 NZ_CP075113.1 Protein Homology CDS 4285278 4286027 . - 0 ID=cds-WP_000560304.1;Parent=gene-CCO47_RS20985;Dbxref=GenBank:WP_000560304.1;Name=WP_000560304.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463241.1;locus_tag=CCO47_RS20985;product=esterase;protein_id=WP_000560304.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4286211 4286540 . + . ID=gene-CCO47_RS20990;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=CCO47_RS20990;old_locus_tag=CCO47_20990 NZ_CP075113.1 Protein Homology CDS 4286211 4286540 . + 0 ID=cds-WP_000586835.1;Parent=gene-CCO47_RS20990;Dbxref=GenBank:WP_000586835.1;Name=WP_000586835.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=CCO47_RS20990;product=biofilm peroxide resistance protein BsmA;protein_id=WP_000586835.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4286671 4286946 . + . ID=gene-CCO47_RS20995;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=CCO47_RS20995;old_locus_tag=CCO47_20995 NZ_CP075113.1 Protein Homology CDS 4286671 4286946 . + 0 ID=cds-WP_001518964.1;Parent=gene-CCO47_RS20995;Dbxref=GenBank:WP_001518964.1;Name=WP_001518964.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134428.1;locus_tag=CCO47_RS20995;product=DUF1471 family protease activator YjfN;protein_id=WP_001518964.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4287024 4288646 . - . ID=gene-CCO47_RS21000;Name=CCO47_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21000;old_locus_tag=CCO47_21000 NZ_CP075113.1 Protein Homology CDS 4287024 4288646 . - 0 ID=cds-WP_000118973.1;Parent=gene-CCO47_RS21000;Dbxref=GenBank:WP_000118973.1;Name=WP_000118973.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463238.3;locus_tag=CCO47_RS21000;product=isovaleryl-CoA dehydrogenase;protein_id=WP_000118973.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4288731 4289894 . - . ID=gene-CCO47_RS21005;Name=CCO47_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21005;old_locus_tag=CCO47_21005 NZ_CP075113.1 Protein Homology CDS 4288731 4289894 . - 0 ID=cds-WP_000943931.1;Parent=gene-CCO47_RS21005;Dbxref=GenBank:WP_000943931.1;Name=WP_000943931.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463237.1;locus_tag=CCO47_RS21005;product=glutathionylspermidine synthase family protein;protein_id=WP_000943931.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4289897 4290535 . - . ID=gene-CCO47_RS21010;Name=CCO47_RS21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21010;old_locus_tag=CCO47_21010 NZ_CP075113.1 Protein Homology CDS 4289897 4290535 . - 0 ID=cds-WP_001085596.1;Parent=gene-CCO47_RS21010;Dbxref=GenBank:WP_001085596.1;Name=WP_001085596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463236.1;locus_tag=CCO47_RS21010;product=DUF1190 domain-containing protein;protein_id=WP_001085596.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4290545 4290943 . - . ID=gene-CCO47_RS21015;Name=CCO47_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21015;old_locus_tag=CCO47_21015 NZ_CP075113.1 Protein Homology CDS 4290545 4290943 . - 0 ID=cds-WP_000547737.1;Parent=gene-CCO47_RS21015;Dbxref=GenBank:WP_000547737.1;Name=WP_000547737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463235.1;locus_tag=CCO47_RS21015;product=DUF350 domain-containing protein;protein_id=WP_000547737.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4290961 4291644 . - . ID=gene-CCO47_RS21020;Name=CCO47_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21020;old_locus_tag=CCO47_21020 NZ_CP075113.1 Protein Homology CDS 4290961 4291644 . - 0 ID=cds-WP_000090288.1;Parent=gene-CCO47_RS21020;Dbxref=GenBank:WP_000090288.1;Name=WP_000090288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463234.3;locus_tag=CCO47_RS21020;product=YjfK family protein;protein_id=WP_000090288.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4291617 4292687 . - . ID=gene-CCO47_RS21025;Name=CCO47_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21025;old_locus_tag=CCO47_21025 NZ_CP075113.1 Protein Homology CDS 4291617 4292687 . - 0 ID=cds-WP_000899676.1;Parent=gene-CCO47_RS21025;Dbxref=GenBank:WP_000899676.1;Name=WP_000899676.1;Ontology_term=GO:0034220,GO:0071805,GO:0005216,GO:0005267,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic ion channel activity|0005216||IEA,potassium channel activity|0005267||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA,potassium ion transmembrane transport|0071805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463233.1;locus_tag=CCO47_RS21025;product=potassium channel family protein;protein_id=WP_000899676.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4292687 4293385 . - . ID=gene-CCO47_RS21030;Name=CCO47_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21030;old_locus_tag=CCO47_21030 NZ_CP075113.1 Protein Homology CDS 4292687 4293385 . - 0 ID=cds-WP_000511974.1;Parent=gene-CCO47_RS21030;Dbxref=GenBank:WP_000511974.1;Name=WP_000511974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=CCO47_RS21030;product=PspA/IM30 family protein;protein_id=WP_000511974.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4293400 4293804 . - . ID=gene-CCO47_RS21035;Name=CCO47_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21035;old_locus_tag=CCO47_21035 NZ_CP075113.1 Protein Homology CDS 4293400 4293804 . - 0 ID=cds-WP_000312605.1;Parent=gene-CCO47_RS21035;Dbxref=GenBank:WP_000312605.1;Name=WP_000312605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463231.1;locus_tag=CCO47_RS21035;product=YjfI family protein;protein_id=WP_000312605.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4293936 4294667 . - . ID=gene-CCO47_RS21040;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=CCO47_RS21040;old_locus_tag=CCO47_21040 NZ_CP075113.1 Protein Homology CDS 4293936 4294667 . - 0 ID=cds-WP_001293277.1;Parent=gene-CCO47_RS21040;Dbxref=GenBank:WP_001293277.1;Name=WP_001293277.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=CCO47_RS21040;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_001293277.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4294758 4297196 . - . ID=gene-CCO47_RS21045;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=CCO47_RS21045;old_locus_tag=CCO47_21045 NZ_CP075113.1 Protein Homology CDS 4294758 4297196 . - 0 ID=cds-WP_000076361.1;Parent=gene-CCO47_RS21045;Dbxref=GenBank:WP_000076361.1;Name=WP_000076361.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463229.1;locus_tag=CCO47_RS21045;product=ribonuclease R;protein_id=WP_000076361.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4297234 4297659 . - . ID=gene-CCO47_RS21050;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=CCO47_RS21050;old_locus_tag=CCO47_21050 NZ_CP075113.1 Protein Homology CDS 4297234 4297659 . - 0 ID=cds-WP_001177632.1;Parent=gene-CCO47_RS21050;Dbxref=GenBank:WP_001177632.1;Name=WP_001177632.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=CCO47_RS21050;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177632.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4297866 4299164 . - . ID=gene-CCO47_RS21055;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=CCO47_RS21055;old_locus_tag=CCO47_21055 NZ_CP075113.1 Protein Homology CDS 4297866 4299164 . - 0 ID=cds-WP_000527976.1;Parent=gene-CCO47_RS21055;Dbxref=GenBank:WP_000527976.1;Name=WP_000527976.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=CCO47_RS21055;product=adenylosuccinate synthase;protein_id=WP_000527976.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4299267 4299464 . - . ID=gene-CCO47_RS21060;Name=CCO47_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21060;old_locus_tag=CCO47_21060 NZ_CP075113.1 Protein Homology CDS 4299267 4299464 . - 0 ID=cds-WP_001089290.1;Parent=gene-CCO47_RS21060;Dbxref=GenBank:WP_001089290.1;Name=WP_001089290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463226.1;locus_tag=CCO47_RS21060;product=DUF2065 domain-containing protein;protein_id=WP_001089290.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4299543 4300547 . - . ID=gene-CCO47_RS21065;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=CCO47_RS21065;old_locus_tag=CCO47_21065 NZ_CP075113.1 Protein Homology CDS 4299543 4300547 . - 0 ID=cds-WP_001232417.1;Parent=gene-CCO47_RS21065;Dbxref=GenBank:WP_001232417.1;Name=WP_001232417.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463225.1;locus_tag=CCO47_RS21065;product=protease modulator HflC;protein_id=WP_001232417.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4300550 4301809 . - . ID=gene-CCO47_RS21070;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=CCO47_RS21070;old_locus_tag=CCO47_21070 NZ_CP075113.1 Protein Homology CDS 4300550 4301809 . - 0 ID=cds-WP_000312508.1;Parent=gene-CCO47_RS21070;Dbxref=GenBank:WP_000312508.1;Name=WP_000312508.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463224.1;locus_tag=CCO47_RS21070;product=FtsH protease activity modulator HflK;protein_id=WP_000312508.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4302024 4303304 . - . ID=gene-CCO47_RS21075;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=CCO47_RS21075;old_locus_tag=CCO47_21075 NZ_CP075113.1 Protein Homology CDS 4302024 4303304 . - 0 ID=cds-WP_000460340.1;Parent=gene-CCO47_RS21075;Dbxref=GenBank:WP_000460340.1;Name=WP_000460340.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463223.1;locus_tag=CCO47_RS21075;product=ribosome rescue GTPase HflX;protein_id=WP_000460340.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4303376 4303684 . - . ID=gene-CCO47_RS21080;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=CCO47_RS21080;old_locus_tag=CCO47_21080 NZ_CP075113.1 Protein Homology CDS 4303376 4303684 . - 0 ID=cds-WP_001051875.1;Parent=gene-CCO47_RS21080;Dbxref=GenBank:WP_001051875.1;Name=WP_001051875.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463222.1;locus_tag=CCO47_RS21080;product=RNA chaperone Hfq;protein_id=WP_001051875.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4303767 4304717 . - . ID=gene-CCO47_RS21085;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=CCO47_RS21085;old_locus_tag=CCO47_21085 NZ_CP075113.1 Protein Homology CDS 4303767 4304717 . - 0 ID=cds-WP_001000734.1;Parent=gene-CCO47_RS21085;Dbxref=GenBank:WP_001000734.1;Name=WP_001000734.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=CCO47_RS21085;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001000734.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4304710 4306566 . - . ID=gene-CCO47_RS21090;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=CCO47_RS21090;old_locus_tag=CCO47_21090 NZ_CP075113.1 Protein Homology CDS 4304710 4306566 . - 0 ID=cds-WP_001122550.1;Parent=gene-CCO47_RS21090;Dbxref=GenBank:WP_001122550.1;Name=WP_001122550.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463220.1;locus_tag=CCO47_RS21090;product=DNA mismatch repair endonuclease MutL;protein_id=WP_001122550.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4306576 4307898 . - . ID=gene-CCO47_RS21095;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=CCO47_RS21095;old_locus_tag=CCO47_21095 NZ_CP075113.1 Protein Homology CDS 4306576 4307898 . - 0 ID=cds-WP_000640354.1;Parent=gene-CCO47_RS21095;Dbxref=GenBank:WP_000640354.1;Name=WP_000640354.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=CCO47_RS21095;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_000640354.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4307915 4308376 . - . ID=gene-CCO47_RS21100;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=CCO47_RS21100;old_locus_tag=CCO47_21100 NZ_CP075113.1 Protein Homology CDS 4307915 4308376 . - 0 ID=cds-WP_000981984.1;Parent=gene-CCO47_RS21100;Dbxref=GenBank:WP_000981984.1;Name=WP_000981984.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463218.1;locus_tag=CCO47_RS21100;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_000981984.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4308348 4309895 . - . ID=gene-CCO47_RS21105;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=CCO47_RS21105;old_locus_tag=CCO47_21105 NZ_CP075113.1 Protein Homology CDS 4308348 4309895 . - 0 ID=cds-WP_000968672.1;Parent=gene-CCO47_RS21105;Dbxref=GenBank:WP_000968672.1;Name=WP_000968672.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=CCO47_RS21105;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_000968672.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4309894 4311033 . + . ID=gene-CCO47_RS21110;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=CCO47_RS21110;old_locus_tag=CCO47_21110 NZ_CP075113.1 Protein Homology CDS 4309894 4311033 . + 0 ID=cds-WP_001615111.1;Parent=gene-CCO47_RS21110;Dbxref=GenBank:WP_001615111.1;Name=WP_001615111.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=CCO47_RS21110;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001615111.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4311303 4311378 . - . ID=gene-CCO47_RS21115;Name=CCO47_RS21115;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS21115;old_locus_tag=CCO47_21115 NZ_CP075113.1 tRNAscan-SE tRNA 4311303 4311378 . - . ID=rna-CCO47_RS21115;Parent=gene-CCO47_RS21115;anticodon=(pos:complement(4311343..4311345));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS21115;product=tRNA-Gly NZ_CP075113.1 tRNAscan-SE exon 4311303 4311378 . - . ID=exon-CCO47_RS21115-1;Parent=rna-CCO47_RS21115;anticodon=(pos:complement(4311343..4311345));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS21115;product=tRNA-Gly NZ_CP075113.1 RefSeq gene 4311535 4311610 . - . ID=gene-CCO47_RS21120;Name=CCO47_RS21120;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS21120;old_locus_tag=CCO47_21120 NZ_CP075113.1 tRNAscan-SE tRNA 4311535 4311610 . - . ID=rna-CCO47_RS21120;Parent=gene-CCO47_RS21120;anticodon=(pos:complement(4311575..4311577));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS21120;product=tRNA-Gly NZ_CP075113.1 tRNAscan-SE exon 4311535 4311610 . - . ID=exon-CCO47_RS21120-1;Parent=rna-CCO47_RS21120;anticodon=(pos:complement(4311575..4311577));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS21120;product=tRNA-Gly NZ_CP075113.1 RefSeq gene 4311767 4311842 . - . ID=gene-CCO47_RS21125;Name=CCO47_RS21125;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS21125;old_locus_tag=CCO47_21125 NZ_CP075113.1 tRNAscan-SE tRNA 4311767 4311842 . - . ID=rna-CCO47_RS21125;Parent=gene-CCO47_RS21125;anticodon=(pos:complement(4311807..4311809));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS21125;product=tRNA-Gly NZ_CP075113.1 tRNAscan-SE exon 4311767 4311842 . - . ID=exon-CCO47_RS21125-1;Parent=rna-CCO47_RS21125;anticodon=(pos:complement(4311807..4311809));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS21125;product=tRNA-Gly NZ_CP075113.1 RefSeq gene 4312118 4312858 . + . ID=gene-CCO47_RS21130;Name=CCO47_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21130;old_locus_tag=CCO47_21130 NZ_CP075113.1 Protein Homology CDS 4312118 4312858 . + 0 ID=cds-WP_000727897.1;Parent=gene-CCO47_RS21130;Dbxref=GenBank:WP_000727897.1;Name=WP_000727897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463215.3;locus_tag=CCO47_RS21130;product=arginine ABC transporter substrate-binding protein;protein_id=WP_000727897.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4312920 4313465 . - . ID=gene-CCO47_RS21135;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=CCO47_RS21135;old_locus_tag=CCO47_21135 NZ_CP075113.1 Protein Homology CDS 4312920 4313465 . - 0 ID=cds-WP_001271546.1;Parent=gene-CCO47_RS21135;Dbxref=GenBank:WP_001271546.1;Name=WP_001271546.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=CCO47_RS21135;product=oligoribonuclease;protein_id=WP_001271546.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4313572 4314624 . + . ID=gene-CCO47_RS21140;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=CCO47_RS21140;old_locus_tag=CCO47_21140 NZ_CP075113.1 Protein Homology CDS 4313572 4314624 . + 0 ID=cds-WP_000041953.1;Parent=gene-CCO47_RS21140;Dbxref=GenBank:WP_000041953.1;Name=WP_000041953.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=CCO47_RS21140;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_000041953.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4314716 4315684 . + . ID=gene-CCO47_RS21145;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=CCO47_RS21145;old_locus_tag=CCO47_21145 NZ_CP075113.1 Protein Homology CDS 4314716 4315684 . + 0 ID=cds-WP_000934949.1;Parent=gene-CCO47_RS21145;Dbxref=GenBank:WP_000934949.1;Name=WP_000934949.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=CCO47_RS21145;product=archaetidylserine decarboxylase;protein_id=WP_000934949.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4315703 4319029 . + . ID=gene-CCO47_RS21150;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=CCO47_RS21150;old_locus_tag=CCO47_21150 NZ_CP075113.1 Protein Homology CDS 4315703 4319029 . + 0 ID=cds-WP_001236755.1;Parent=gene-CCO47_RS21150;Dbxref=GenBank:WP_001236755.1;Name=WP_001236755.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=CCO47_RS21150;product=miniconductance mechanosensitive channel MscM;protein_id=WP_001236755.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4319096 4319410 . - . ID=gene-CCO47_RS21155;Name=CCO47_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21155;old_locus_tag=CCO47_21155 NZ_CP075113.1 Protein Homology CDS 4319096 4319410 . - 0 ID=cds-WP_000074660.1;Parent=gene-CCO47_RS21155;Dbxref=GenBank:WP_000074660.1;Name=WP_000074660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463210.1;locus_tag=CCO47_RS21155;product=YjeO family protein;protein_id=WP_000074660.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4319462 4320943 . - . ID=gene-CCO47_RS21160;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=CCO47_RS21160;old_locus_tag=CCO47_21160 NZ_CP075113.1 Protein Homology CDS 4319462 4320943 . - 0 ID=cds-WP_000052441.1;Parent=gene-CCO47_RS21160;Dbxref=GenBank:WP_000052441.1;Name=WP_000052441.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463209.1;locus_tag=CCO47_RS21160;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_000052441.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4321190 4322167 . - . ID=gene-CCO47_RS21165;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=CCO47_RS21165;old_locus_tag=CCO47_21165 NZ_CP075113.1 Protein Homology CDS 4321190 4322167 . - 0 ID=cds-WP_000004793.1;Parent=gene-CCO47_RS21165;Dbxref=GenBank:WP_000004793.1;Name=WP_000004793.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=CCO47_RS21165;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_000004793.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4322490 4324280 . + . ID=gene-CCO47_RS21170;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=CCO47_RS21170;old_locus_tag=CCO47_21170 NZ_CP075113.1 Protein Homology CDS 4322490 4324280 . + 0 ID=cds-WP_001192957.1;Parent=gene-CCO47_RS21170;Dbxref=GenBank:WP_001192957.1;Name=WP_001192957.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463207.1;locus_tag=CCO47_RS21170;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192957.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4324273 4325007 . + . ID=gene-CCO47_RS21175;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=CCO47_RS21175;old_locus_tag=CCO47_21175 NZ_CP075113.1 Protein Homology CDS 4324273 4325007 . + 0 ID=cds-WP_000829509.1;Parent=gene-CCO47_RS21175;Dbxref=GenBank:WP_000829509.1;Name=WP_000829509.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=CCO47_RS21175;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829509.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4325018 4325413 . + . ID=gene-CCO47_RS21180;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=CCO47_RS21180;old_locus_tag=CCO47_21180 NZ_CP075113.1 Protein Homology CDS 4325018 4325413 . + 0 ID=cds-WP_000208766.1;Parent=gene-CCO47_RS21180;Dbxref=GenBank:WP_000208766.1;Name=WP_000208766.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463205.1;locus_tag=CCO47_RS21180;product=fumarate reductase subunit FrdC;protein_id=WP_000208766.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4325424 4325783 . + . ID=gene-CCO47_RS21185;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=CCO47_RS21185;old_locus_tag=CCO47_21185 NZ_CP075113.1 Protein Homology CDS 4325424 4325783 . + 0 ID=cds-WP_000609650.1;Parent=gene-CCO47_RS21185;Dbxref=GenBank:WP_000609650.1;Name=WP_000609650.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463204.1;locus_tag=CCO47_RS21185;product=fumarate reductase subunit FrdD;protein_id=WP_000609650.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4325895 4326428 . + . ID=gene-CCO47_RS21190;Name=CCO47_RS21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21190;old_locus_tag=CCO47_21190 NZ_CP075113.1 Protein Homology CDS 4325895 4326428 . + 0 ID=cds-WP_001221671.1;Parent=gene-CCO47_RS21190;Dbxref=GenBank:WP_001221671.1;Name=WP_001221671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463203.1;locus_tag=CCO47_RS21190;product=lipocalin family protein;protein_id=WP_001221671.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4326445 4326762 . - . ID=gene-CCO47_RS21195;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=CCO47_RS21195;old_locus_tag=CCO47_21195 NZ_CP075113.1 Protein Homology CDS 4326445 4326762 . - 0 ID=cds-WP_000118469.1;Parent=gene-CCO47_RS21195;Dbxref=GenBank:WP_000118469.1;Name=WP_000118469.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463202.1;locus_tag=CCO47_RS21195;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118469.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4327019 4327606 . + . ID=gene-CCO47_RS21200;Name=CCO47_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21200;old_locus_tag=CCO47_21200 NZ_CP075113.1 Protein Homology CDS 4327019 4327606 . + 0 ID=cds-WP_000912957.1;Parent=gene-CCO47_RS21200;Dbxref=GenBank:WP_000912957.1;Name=WP_000912957.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463201.1;locus_tag=CCO47_RS21200;product=helix-turn-helix transcriptional regulator;protein_id=WP_000912957.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4327637 4327783 . - . ID=gene-CCO47_RS21205;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=CCO47_RS21205;old_locus_tag=CCO47_21205 NZ_CP075113.1 Protein Homology CDS 4327637 4327783 . - 0 ID=cds-WP_000239598.1;Parent=gene-CCO47_RS21205;Dbxref=GenBank:WP_000239598.1;Name=WP_000239598.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463200.1;locus_tag=CCO47_RS21205;product=lipoprotein toxin entericidin B;protein_id=WP_000239598.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4327891 4328025 . - . ID=gene-CCO47_RS21210;Name=CCO47_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21210;old_locus_tag=CCO47_21210 NZ_CP075113.1 Protein Homology CDS 4327891 4328025 . - 0 ID=cds-WP_001595192.1;Parent=gene-CCO47_RS21210;Dbxref=GenBank:WP_001595192.1;Name=WP_001595192.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=CCO47_RS21210;product=entericidin A/B family lipoprotein;protein_id=WP_001595192.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4328086 4328652 . - . ID=gene-CCO47_RS21215;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=CCO47_RS21215;old_locus_tag=CCO47_21215 NZ_CP075113.1 Protein Homology CDS 4328086 4328652 . - 0 ID=cds-WP_000257282.1;Parent=gene-CCO47_RS21215;Dbxref=GenBank:WP_000257282.1;Name=WP_000257282.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=CCO47_RS21215;product=elongation factor P;protein_id=WP_000257282.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4328693 4329721 . + . ID=gene-CCO47_RS21220;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=CCO47_RS21220;old_locus_tag=CCO47_21220 NZ_CP075113.1 Protein Homology CDS 4328693 4329721 . + 0 ID=cds-WP_000940471.1;Parent=gene-CCO47_RS21220;Dbxref=GenBank:WP_000940471.1;Name=WP_000940471.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463197.1;locus_tag=CCO47_RS21220;product=EF-P beta-lysylation protein EpmB;protein_id=WP_000940471.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4330003 4330860 . + . ID=gene-CCO47_RS21225;Name=CCO47_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21225;old_locus_tag=CCO47_21225 NZ_CP075113.1 Protein Homology CDS 4330003 4330860 . + 0 ID=cds-WP_001229230.1;Parent=gene-CCO47_RS21225;Dbxref=GenBank:WP_001229230.1;Name=WP_001229230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463196.1;locus_tag=CCO47_RS21225;product=YjeJ family protein;protein_id=WP_001229230.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4330908 4331261 . - . ID=gene-CCO47_RS21230;Name=CCO47_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21230;old_locus_tag=CCO47_21230 NZ_CP075113.1 Protein Homology CDS 4330908 4331261 . - 0 ID=cds-WP_000558210.1;Parent=gene-CCO47_RS21230;Dbxref=GenBank:WP_000558210.1;Name=WP_000558210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=CCO47_RS21230;product=DUF4156 domain-containing protein;protein_id=WP_000558210.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4331505 4333151 . - . ID=gene-CCO47_RS21235;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=CCO47_RS21235;old_locus_tag=CCO47_21235 NZ_CP075113.1 Protein Homology CDS 4331505 4333151 . - 0 ID=cds-WP_000729126.1;Parent=gene-CCO47_RS21235;Dbxref=GenBank:WP_000729126.1;Name=WP_000729126.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=CCO47_RS21235;product=chaperonin GroEL;protein_id=WP_000729126.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4333195 4333488 . - . ID=gene-CCO47_RS21240;Name=CCO47_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21240;old_locus_tag=CCO47_21240 NZ_CP075113.1 Protein Homology CDS 4333195 4333488 . - 0 ID=cds-WP_000027827.1;Parent=gene-CCO47_RS21240;Dbxref=GenBank:WP_000027827.1;Name=WP_000027827.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=CCO47_RS21240;product=co-chaperone GroES;protein_id=WP_000027827.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4333764 4335005 . + . ID=gene-CCO47_RS21245;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=CCO47_RS21245;old_locus_tag=CCO47_21245 NZ_CP075113.1 Protein Homology CDS 4333764 4335005 . + 0 ID=cds-WP_001670701.1;Parent=gene-CCO47_RS21245;Dbxref=GenBank:WP_001670701.1;Name=WP_001670701.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463192.1;locus_tag=CCO47_RS21245;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_001670701.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4335064 4335540 . - . ID=gene-CCO47_RS21250;Name=CCO47_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21250;old_locus_tag=CCO47_21250 NZ_CP075113.1 Protein Homology CDS 4335064 4335540 . - 0 ID=cds-WP_001267291.1;Parent=gene-CCO47_RS21250;Dbxref=GenBank:WP_001267291.1;Name=WP_001267291.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313148.1;locus_tag=CCO47_RS21250;product=FxsA family protein;protein_id=WP_001267291.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4335881 4337317 . + . ID=gene-CCO47_RS21255;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=CCO47_RS21255;old_locus_tag=CCO47_21255 NZ_CP075113.1 Protein Homology CDS 4335881 4337317 . + 0 ID=cds-WP_000069440.1;Parent=gene-CCO47_RS21255;Dbxref=GenBank:WP_000069440.1;Name=WP_000069440.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463190.1;locus_tag=CCO47_RS21255;product=aspartate ammonia-lyase;protein_id=WP_000069440.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4337432 4338733 . + . ID=gene-CCO47_RS21260;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=CCO47_RS21260;old_locus_tag=CCO47_21260 NZ_CP075113.1 Protein Homology CDS 4337432 4338733 . + 0 ID=cds-WP_000637595.1;Parent=gene-CCO47_RS21260;Dbxref=GenBank:WP_000637595.1;Name=WP_000637595.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=CCO47_RS21260;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000637595.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4338854 4339201 . + . ID=gene-CCO47_RS21265;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=CCO47_RS21265;old_locus_tag=CCO47_21265 NZ_CP075113.1 Protein Homology CDS 4338854 4339201 . + 0 ID=cds-WP_000887832.1;Parent=gene-CCO47_RS21265;Dbxref=GenBank:WP_000887832.1;Name=WP_000887832.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463188.1;locus_tag=CCO47_RS21265;product=divalent cation tolerance protein CutA;protein_id=WP_000887832.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4339177 4340880 . + . ID=gene-CCO47_RS21270;Name=CCO47_RS21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21270;old_locus_tag=CCO47_21270 NZ_CP075113.1 Protein Homology CDS 4339177 4340880 . + 0 ID=cds-WP_000068885.1;Parent=gene-CCO47_RS21270;Dbxref=GenBank:WP_000068885.1;Name=WP_000068885.1;Ontology_term=GO:0017004,GO:0009055,GO:0030554,GO:0047134;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,adenyl nucleotide binding|0030554||IEA,protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=CCO47_RS21270;product=protein-disulfide reductase DsbD;protein_id=WP_000068885.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4340917 4341492 . + . ID=gene-CCO47_RS21275;Name=CCO47_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21275;old_locus_tag=CCO47_21275 NZ_CP075113.1 Protein Homology CDS 4340917 4341492 . + 0 ID=cds-WP_001188509.1;Parent=gene-CCO47_RS21275;Dbxref=GenBank:WP_001188509.1;Name=WP_001188509.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463186.1;locus_tag=CCO47_RS21275;product=transcriptional regulator;protein_id=WP_001188509.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4341608 4341683 . + . ID=gene-CCO47_RS21280;Name=CCO47_RS21280;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS21280;old_locus_tag=CCO47_21280 NZ_CP075113.1 tRNAscan-SE tRNA 4341608 4341683 . + . ID=rna-CCO47_RS21280;Parent=gene-CCO47_RS21280;anticodon=(pos:4341641..4341643);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS21280;product=tRNA-Phe NZ_CP075113.1 tRNAscan-SE exon 4341608 4341683 . + . ID=exon-CCO47_RS21280-1;Parent=rna-CCO47_RS21280;anticodon=(pos:4341641..4341643);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS21280;product=tRNA-Phe NZ_CP075113.1 RefSeq pseudogene 4341763 4341837 . - . ID=gene-CCO47_RS21285;Name=CCO47_RS21285;end_range=4341837,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS21285;old_locus_tag=CCO47_21285;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 4341763 4341837 . - 0 ID=cds-CCO47_RS21285;Parent=gene-CCO47_RS21285;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4341837,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003842122.1;locus_tag=CCO47_RS21285;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 4342394 4343146 . + . ID=gene-CCO47_RS21295;Name=CCO47_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21295;old_locus_tag=CCO47_21295 NZ_CP075113.1 Protein Homology CDS 4342394 4343146 . + 0 ID=cds-WP_000842432.1;Parent=gene-CCO47_RS21295;Dbxref=GenBank:WP_000842432.1;Name=WP_000842432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463184.1;locus_tag=CCO47_RS21295;product=non-specific acid phosphatase;protein_id=WP_000842432.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4343394 4343885 . - . ID=gene-CCO47_RS21300;Name=CCO47_RS21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21300;old_locus_tag=CCO47_21300 NZ_CP075113.1 Protein Homology CDS 4343394 4343885 . - 0 ID=cds-WP_000625912.1;Parent=gene-CCO47_RS21300;Dbxref=GenBank:WP_000625912.1;Name=WP_000625912.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463183.1;locus_tag=CCO47_RS21300;product=GNAT family N-acetyltransferase;protein_id=WP_000625912.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4343882 4344175 . - . ID=gene-CCO47_RS21305;Name=CCO47_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21305;old_locus_tag=CCO47_21305 NZ_CP075113.1 Protein Homology CDS 4343882 4344175 . - 0 ID=cds-WP_001110450.1;Parent=gene-CCO47_RS21305;Dbxref=GenBank:WP_001110450.1;Name=WP_001110450.1;Ontology_term=GO:0006355,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463182.1;locus_tag=CCO47_RS21305;product=type II toxin-antitoxin system TacA family antitoxin;protein_id=WP_001110450.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4344492 4344714 . + . ID=gene-CCO47_RS24315;Name=CCO47_RS24315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24315;pseudo=true NZ_CP075113.1 Protein Homology CDS 4344492 4344714 . + 0 ID=cds-CCO47_RS24315;Parent=gene-CCO47_RS24315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463181.1;locus_tag=CCO47_RS24315;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 4344978 4345853 . + . ID=gene-CCO47_RS21310;Name=CCO47_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21310;old_locus_tag=CCO47_21310 NZ_CP075113.1 Protein Homology CDS 4344978 4345853 . + 0 ID=cds-WP_000921679.1;Parent=gene-CCO47_RS21310;Dbxref=GenBank:WP_000921679.1;Name=WP_000921679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463180.1;locus_tag=CCO47_RS21310;product=AraC family transcriptional regulator;protein_id=WP_000921679.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4345850 4346137 . + . ID=gene-CCO47_RS21315;Name=rtsB;gbkey=Gene;gene=rtsB;gene_biotype=protein_coding;locus_tag=CCO47_RS21315;old_locus_tag=CCO47_21315 NZ_CP075113.1 Protein Homology CDS 4345850 4346137 . + 0 ID=cds-WP_001269916.1;Parent=gene-CCO47_RS21315;Dbxref=GenBank:WP_001269916.1;Name=WP_001269916.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rtsB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463179.3;locus_tag=CCO47_RS21315;product=transcriptional regulator RtsB;protein_id=WP_001269916.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4346160 4346375 . + . ID=gene-CCO47_RS21320;Name=CCO47_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21320;old_locus_tag=CCO47_21320 NZ_CP075113.1 Protein Homology CDS 4346160 4346375 . + 0 ID=cds-WP_001595136.1;Parent=gene-CCO47_RS21320;Dbxref=GenBank:WP_001595136.1;Name=WP_001595136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463178.1;locus_tag=CCO47_RS21320;product=Ig-like domain-containing protein;protein_id=WP_001595136.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4346383 4346652 . + . ID=gene-CCO47_RS21325;Name=CCO47_RS21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21325;old_locus_tag=CCO47_21325 NZ_CP075113.1 Protein Homology CDS 4346383 4346652 . + 0 ID=cds-WP_077906657.1;Parent=gene-CCO47_RS21325;Dbxref=GenBank:WP_077906657.1;Name=WP_077906657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=CCO47_RS21325;product=hypothetical protein;protein_id=WP_077906657.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4346946 4347851 . - . ID=gene-CCO47_RS21330;Name=CCO47_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21330;old_locus_tag=CCO47_21330 NZ_CP075113.1 Protein Homology CDS 4346946 4347851 . - 0 ID=cds-WP_001268195.1;Parent=gene-CCO47_RS21330;Dbxref=GenBank:WP_001268195.1;Name=WP_001268195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463175.1;locus_tag=CCO47_RS21330;product=SdiA-regulated domain-containing protein;protein_id=WP_001268195.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4348155 4349555 . + . ID=gene-CCO47_RS21335;Name=CCO47_RS21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21335;old_locus_tag=CCO47_21335 NZ_CP075113.1 Protein Homology CDS 4348155 4349555 . + 0 ID=cds-WP_000773791.1;Parent=gene-CCO47_RS21335;Dbxref=GenBank:WP_000773791.1;Name=WP_000773791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=CCO47_RS21335;product=CBM96 family carbohydrate-binding protein;protein_id=WP_000773791.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4349639 4350232 . - . ID=gene-CCO47_RS21340;Name=CCO47_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21340;old_locus_tag=CCO47_21340 NZ_CP075113.1 Protein Homology CDS 4349639 4350232 . - 0 ID=cds-WP_001575311.1;Parent=gene-CCO47_RS21340;Dbxref=GenBank:WP_001575311.1;Name=WP_001575311.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001629474.1;locus_tag=CCO47_RS21340;product=TorD/DmsD family molecular chaperone;protein_id=WP_001575311.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4350308 4351081 . - . ID=gene-CCO47_RS21345;Name=CCO47_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21345;old_locus_tag=CCO47_21345 NZ_CP075113.1 Protein Homology CDS 4350308 4351081 . - 0 ID=cds-WP_000544927.1;Parent=gene-CCO47_RS21345;Dbxref=GenBank:WP_000544927.1;Name=WP_000544927.1;Ontology_term=GO:0019645,GO:0009389,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=CCO47_RS21345;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000544927.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4351074 4351700 . - . ID=gene-CCO47_RS21350;Name=CCO47_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21350;old_locus_tag=CCO47_21350 NZ_CP075113.1 Protein Homology CDS 4351074 4351700 . - 0 ID=cds-WP_000816143.1;Parent=gene-CCO47_RS21350;Dbxref=GenBank:WP_000816143.1;Name=WP_000816143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=CCO47_RS21350;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_000816143.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4351714 4354143 . - . ID=gene-CCO47_RS21355;Name=CCO47_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21355;old_locus_tag=CCO47_21355 NZ_CP075113.1 Protein Homology CDS 4351714 4354143 . - 0 ID=cds-WP_000403491.1;Parent=gene-CCO47_RS21355;Dbxref=GenBank:WP_000403491.1;Name=WP_000403491.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403483.1;locus_tag=CCO47_RS21355;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_000403491.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4354499 4356130 . + . ID=gene-CCO47_RS21360;Name=CCO47_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21360;old_locus_tag=CCO47_21360 NZ_CP075113.1 Protein Homology CDS 4354499 4356130 . + 0 ID=cds-WP_000682896.1;Parent=gene-CCO47_RS21360;Dbxref=GenBank:WP_000682896.1;Name=WP_000682896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463169.1;locus_tag=CCO47_RS21360;product=sensor histidine kinase;protein_id=WP_000682896.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4356127 4356846 . + . ID=gene-CCO47_RS21365;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=CCO47_RS21365;old_locus_tag=CCO47_21365 NZ_CP075113.1 Protein Homology CDS 4356127 4356846 . + 0 ID=cds-WP_000611307.1;Parent=gene-CCO47_RS21365;Dbxref=GenBank:WP_000611307.1;Name=WP_000611307.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463168.1;locus_tag=CCO47_RS21365;product=two-component system response regulator DcuR;protein_id=WP_000611307.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4357163 4357429 . + . ID=gene-CCO47_RS21370;Name=CCO47_RS21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21370;old_locus_tag=CCO47_21370 NZ_CP075113.1 Protein Homology CDS 4357163 4357429 . + 0 ID=cds-WP_024132416.1;Parent=gene-CCO47_RS21370;Dbxref=GenBank:WP_024132416.1;Name=WP_024132416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=CCO47_RS21370;product=hypothetical protein;protein_id=WP_024132416.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4357576 4358916 . + . ID=gene-CCO47_RS21375;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=CCO47_RS21375;old_locus_tag=CCO47_21375 NZ_CP075113.1 Protein Homology CDS 4357576 4358916 . + 0 ID=cds-WP_000899153.1;Parent=gene-CCO47_RS21375;Dbxref=GenBank:WP_000899153.1;Name=WP_000899153.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463166.1;locus_tag=CCO47_RS21375;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_000899153.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4359012 4360658 . + . ID=gene-CCO47_RS21380;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=CCO47_RS21380;old_locus_tag=CCO47_21380 NZ_CP075113.1 Protein Homology CDS 4359012 4360658 . + 0 ID=cds-WP_000037191.1;Parent=gene-CCO47_RS21380;Dbxref=GenBank:WP_000037191.1;Name=WP_000037191.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463165.1;locus_tag=CCO47_RS21380;product=class I fumarate hydratase FumA;protein_id=WP_000037191.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4360760 4362190 . - . ID=gene-CCO47_RS21385;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=CCO47_RS21385;old_locus_tag=CCO47_21385 NZ_CP075113.1 Protein Homology CDS 4360760 4362190 . - 0 ID=cds-WP_000028070.1;Parent=gene-CCO47_RS21385;Dbxref=GenBank:WP_000028070.1;Name=WP_000028070.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463164.1;locus_tag=CCO47_RS21385;product=melibiose:sodium transporter MelB;protein_id=WP_000028070.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4362274 4363629 . - . ID=gene-CCO47_RS21390;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=CCO47_RS21390;old_locus_tag=CCO47_21390 NZ_CP075113.1 Protein Homology CDS 4362274 4363629 . - 0 ID=cds-WP_001520868.1;Parent=gene-CCO47_RS21390;Dbxref=GenBank:WP_001520868.1;Name=WP_001520868.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=CCO47_RS21390;product=alpha-galactosidase;protein_id=WP_001520868.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4363898 4364830 . + . ID=gene-CCO47_RS21395;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=CCO47_RS21395;old_locus_tag=CCO47_21395 NZ_CP075113.1 Protein Homology CDS 4363898 4364830 . + 0 ID=cds-WP_000106992.1;Parent=gene-CCO47_RS21395;Dbxref=GenBank:WP_000106992.1;Name=WP_000106992.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463162.1;locus_tag=CCO47_RS21395;product=transcriptional regulator MelR;protein_id=WP_000106992.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4365063 4367330 . + . ID=gene-CCO47_RS21400;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=CCO47_RS21400;old_locus_tag=CCO47_21400 NZ_CP075113.1 Protein Homology CDS 4365063 4367330 . + 0 ID=cds-WP_001669297.1;Parent=gene-CCO47_RS21400;Dbxref=GenBank:WP_001669297.1;Name=WP_001669297.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709824.2;locus_tag=CCO47_RS21400;product=arginine decarboxylase;protein_id=WP_001669297.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4367628 4368389 . + . ID=gene-CCO47_RS21405;Name=CCO47_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21405;old_locus_tag=CCO47_21405 NZ_CP075113.1 Protein Homology CDS 4367628 4368389 . + 0 ID=cds-WP_001217074.1;Parent=gene-CCO47_RS21405;Dbxref=GenBank:WP_001217074.1;Name=WP_001217074.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463160.1;locus_tag=CCO47_RS21405;product=AraC family transcriptional regulator;protein_id=WP_001217074.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4368529 4369866 . + . ID=gene-CCO47_RS21410;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=CCO47_RS21410;old_locus_tag=CCO47_21410 NZ_CP075113.1 Protein Homology CDS 4368529 4369866 . + 0 ID=cds-WP_000093130.1;Parent=gene-CCO47_RS21410;Dbxref=GenBank:WP_000093130.1;Name=WP_000093130.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463159.1;locus_tag=CCO47_RS21410;product=arginine/agmatine antiporter;protein_id=WP_000093130.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4370051 4371643 . + . ID=gene-CCO47_RS21415;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=CCO47_RS21415;old_locus_tag=CCO47_21415 NZ_CP075113.1 Protein Homology CDS 4370051 4371643 . + 0 ID=cds-WP_071591187.1;Parent=gene-CCO47_RS21415;Dbxref=GenBank:WP_071591187.1;Name=WP_071591187.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463158.1;locus_tag=CCO47_RS21415;product=phosphoethanolamine transferase EptA;protein_id=WP_071591187.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4371640 4372308 . + . ID=gene-CCO47_RS21420;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=CCO47_RS21420;old_locus_tag=CCO47_21420 NZ_CP075113.1 Protein Homology CDS 4371640 4372308 . + 0 ID=cds-WP_000697899.1;Parent=gene-CCO47_RS21420;Dbxref=GenBank:WP_000697899.1;Name=WP_000697899.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463157.1;locus_tag=CCO47_RS21420;product=two-component system response regulator PmrA;protein_id=WP_000697899.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4372318 4373388 . + . ID=gene-CCO47_RS21425;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=CCO47_RS21425;old_locus_tag=CCO47_21425 NZ_CP075113.1 Protein Homology CDS 4372318 4373388 . + 0 ID=cds-WP_077906656.1;Parent=gene-CCO47_RS21425;Dbxref=GenBank:WP_077906656.1;Name=WP_077906656.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=CCO47_RS21425;product=two-component system sensor histidine kinase PmrB;protein_id=WP_077906656.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4373396 4373485 . - . ID=gene-CCO47_RS21430;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=CCO47_RS21430;old_locus_tag=CCO47_21430 NZ_CP075113.1 Protein Homology CDS 4373396 4373485 . - 0 ID=cds-WP_000844399.1;Parent=gene-CCO47_RS21430;Dbxref=GenBank:WP_000844399.1;Name=WP_000844399.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=CCO47_RS21430;product=LpxT activity modulator PmrR;protein_id=WP_000844399.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4373555 4375057 . - . ID=gene-CCO47_RS21435;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=CCO47_RS21435;old_locus_tag=CCO47_21435 NZ_CP075113.1 Protein Homology CDS 4373555 4375057 . - 0 ID=cds-WP_000919710.1;Parent=gene-CCO47_RS21435;Dbxref=GenBank:WP_000919710.1;Name=WP_000919710.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=CCO47_RS21435;product=glycine betaine/L-proline transporter ProP;protein_id=WP_000919710.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4375525 4375860 . + . ID=gene-CCO47_RS21440;Name=CCO47_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21440;old_locus_tag=CCO47_21440 NZ_CP075113.1 Protein Homology CDS 4375525 4375860 . + 0 ID=cds-WP_000056482.1;Parent=gene-CCO47_RS21440;Dbxref=GenBank:WP_000056482.1;Name=WP_000056482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463154.1;locus_tag=CCO47_RS21440;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_000056482.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4375980 4376423 . + . ID=gene-CCO47_RS21445;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=CCO47_RS21445;old_locus_tag=CCO47_21445 NZ_CP075113.1 Protein Homology CDS 4375980 4376423 . + 0 ID=cds-WP_001131305.1;Parent=gene-CCO47_RS21445;Dbxref=GenBank:WP_001131305.1;Name=WP_001131305.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463153.1;locus_tag=CCO47_RS21445;product=VOC family metalloprotein YjdN;protein_id=WP_001131305.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4376575 4377009 . + . ID=gene-CCO47_RS21450;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=CCO47_RS21450;old_locus_tag=CCO47_21450 NZ_CP075113.1 Protein Homology CDS 4376575 4377009 . + 0 ID=cds-WP_001674343.1;Parent=gene-CCO47_RS21450;Dbxref=GenBank:WP_001674343.1;Name=WP_001674343.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=CCO47_RS21450;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_001674343.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4377267 4378175 . + . ID=gene-CCO47_RS21455;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=CCO47_RS21455;old_locus_tag=CCO47_21455 NZ_CP075113.1 Protein Homology CDS 4377267 4378175 . + 0 ID=cds-WP_000457029.1;Parent=gene-CCO47_RS21455;Dbxref=GenBank:WP_000457029.1;Name=WP_000457029.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463151.1;locus_tag=CCO47_RS21455;product=lipid A hydroxylase LpxO;protein_id=WP_000457029.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4378541 4380688 . + . ID=gene-CCO47_RS21460;Name=CCO47_RS21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21460;old_locus_tag=CCO47_21460 NZ_CP075113.1 Protein Homology CDS 4378541 4380688 . + 0 ID=cds-WP_001575298.1;Parent=gene-CCO47_RS21460;Dbxref=GenBank:WP_001575298.1;Name=WP_001575298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=CCO47_RS21460;product=formate dehydrogenase H subunit alpha%2C selenocysteine-containing;protein_id=WP_001575298.1;transl_except=(pos:4378958..4378960%2Caa:Sec);transl_table=11 NZ_CP075113.1 RefSeq gene 4380865 4381554 . + . ID=gene-CCO47_RS21465;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=CCO47_RS21465;old_locus_tag=CCO47_21465 NZ_CP075113.1 Protein Homology CDS 4380865 4381554 . + 0 ID=cds-WP_000771454.1;Parent=gene-CCO47_RS21465;Dbxref=GenBank:WP_000771454.1;Name=WP_000771454.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463149.1;locus_tag=CCO47_RS21465;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_000771454.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4381631 4381707 . - . ID=gene-CCO47_RS24520;Name=CCO47_RS24520;end_range=4381707,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24520;partial=true;pseudo=true;start_range=.,4381631 NZ_CP075113.1 Protein Homology CDS 4381631 4381707 . - 0 ID=cds-CCO47_RS24520;Parent=gene-CCO47_RS24520;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4381707,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO47_RS24520;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4381631;transl_table=11 NZ_CP075113.1 RefSeq gene 4381712 4383022 . - . ID=gene-CCO47_RS21470;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=CCO47_RS21470;old_locus_tag=CCO47_21470 NZ_CP075113.1 Protein Homology CDS 4381712 4383022 . - 0 ID=cds-WP_000793278.1;Parent=gene-CCO47_RS21470;Dbxref=GenBank:WP_000793278.1;Name=WP_000793278.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463148.1;locus_tag=CCO47_RS21470;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_000793278.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4383367 4383987 . - . ID=gene-CCO47_RS21475;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=CCO47_RS21475;old_locus_tag=CCO47_21475 NZ_CP075113.1 Protein Homology CDS 4383367 4383987 . - 0 ID=cds-WP_000083223.1;Parent=gene-CCO47_RS21475;Dbxref=GenBank:WP_000083223.1;Name=WP_000083223.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=CCO47_RS21475;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_000083223.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4383984 4386206 . - . ID=gene-CCO47_RS21480;Name=nrfEF;gbkey=Gene;gene=nrfEF;gene_biotype=protein_coding;locus_tag=CCO47_RS21480;old_locus_tag=CCO47_21480 NZ_CP075113.1 Protein Homology CDS 4383984 4386206 . - 0 ID=cds-WP_000551708.1;Parent=gene-CCO47_RS21480;Dbxref=GenBank:WP_000551708.1;Name=WP_000551708.1;gbkey=CDS;gene=nrfEF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO47_RS21480;product=heme lyase NrfEFG subunit NrfEF;protein_id=WP_000551708.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4386199 4387155 . - . ID=gene-CCO47_RS21485;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=CCO47_RS21485;old_locus_tag=CCO47_21485 NZ_CP075113.1 Protein Homology CDS 4386199 4387155 . - 0 ID=cds-WP_000199624.1;Parent=gene-CCO47_RS21485;Dbxref=GenBank:WP_000199624.1;Name=WP_000199624.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=CCO47_RS21485;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_000199624.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4387152 4387823 . - . ID=gene-CCO47_RS21490;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=CCO47_RS21490;old_locus_tag=CCO47_21490 NZ_CP075113.1 Protein Homology CDS 4387152 4387823 . - 0 ID=cds-WP_001278035.1;Parent=gene-CCO47_RS21490;Dbxref=GenBank:WP_001278035.1;Name=WP_001278035.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463144.1;locus_tag=CCO47_RS21490;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_001278035.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4387820 4388386 . - . ID=gene-CCO47_RS21495;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=CCO47_RS21495;old_locus_tag=CCO47_21495 NZ_CP075113.1 Protein Homology CDS 4387820 4388386 . - 0 ID=cds-WP_000115065.1;Parent=gene-CCO47_RS21495;Dbxref=GenBank:WP_000115065.1;Name=WP_000115065.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=CCO47_RS21495;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_000115065.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4388498 4389934 . - . ID=gene-CCO47_RS21500;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=CCO47_RS21500;old_locus_tag=CCO47_21500 NZ_CP075113.1 Protein Homology CDS 4388498 4389934 . - 0 ID=cds-WP_000101775.1;Parent=gene-CCO47_RS21500;Dbxref=GenBank:WP_000101775.1;Name=WP_000101775.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463142.1;locus_tag=CCO47_RS21500;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_000101775.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4390366 4392324 . + . ID=gene-CCO47_RS21505;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=CCO47_RS21505;old_locus_tag=CCO47_21505 NZ_CP075113.1 Protein Homology CDS 4390366 4392324 . + 0 ID=cds-WP_000083868.1;Parent=gene-CCO47_RS21505;Dbxref=GenBank:WP_000083868.1;Name=WP_000083868.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463140.1;locus_tag=CCO47_RS21505;product=acetate--CoA ligase;protein_id=WP_000083868.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4392564 4392878 . + . ID=gene-CCO47_RS21510;Name=CCO47_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21510;old_locus_tag=CCO47_21510 NZ_CP075113.1 Protein Homology CDS 4392564 4392878 . + 0 ID=cds-WP_000999620.1;Parent=gene-CCO47_RS21510;Dbxref=GenBank:WP_000999620.1;Name=WP_000999620.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463139.1;locus_tag=CCO47_RS21510;product=DUF485 domain-containing protein;protein_id=WP_000999620.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4392875 4394524 . + . ID=gene-CCO47_RS21515;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=CCO47_RS21515;old_locus_tag=CCO47_21515 NZ_CP075113.1 Protein Homology CDS 4392875 4394524 . + 0 ID=cds-WP_000832535.1;Parent=gene-CCO47_RS21515;Dbxref=GenBank:WP_000832535.1;Name=WP_000832535.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=CCO47_RS21515;product=cation/acetate symporter ActP;protein_id=WP_000832535.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4394563 4395252 . - . ID=gene-CCO47_RS21520;Name=CCO47_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21520;old_locus_tag=CCO47_21520 NZ_CP075113.1 Protein Homology CDS 4394563 4395252 . - 0 ID=cds-WP_001067093.1;Parent=gene-CCO47_RS21520;Dbxref=GenBank:WP_001067093.1;Name=WP_001067093.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=CCO47_RS21520;product=LrgB family protein;protein_id=WP_001067093.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4395245 4395655 . - . ID=gene-CCO47_RS21525;Name=CCO47_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21525;old_locus_tag=CCO47_21525 NZ_CP075113.1 Protein Homology CDS 4395245 4395655 . - 0 ID=cds-WP_000257347.1;Parent=gene-CCO47_RS21525;Dbxref=GenBank:WP_000257347.1;Name=WP_000257347.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463136.1;locus_tag=CCO47_RS21525;product=CidA/LrgA family protein;protein_id=WP_000257347.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4395759 4396646 . + . ID=gene-CCO47_RS21530;Name=CCO47_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21530;old_locus_tag=CCO47_21530 NZ_CP075113.1 Protein Homology CDS 4395759 4396646 . + 0 ID=cds-WP_000354962.1;Parent=gene-CCO47_RS21530;Dbxref=GenBank:WP_000354962.1;Name=WP_000354962.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463135.1;locus_tag=CCO47_RS21530;product=LysR family transcriptional regulator;protein_id=WP_000354962.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4396741 4398387 . - . ID=gene-CCO47_RS21535;Name=CCO47_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21535;old_locus_tag=CCO47_21535 NZ_CP075113.1 Protein Homology CDS 4396741 4398387 . - 0 ID=cds-WP_000402189.1;Parent=gene-CCO47_RS21535;Dbxref=GenBank:WP_000402189.1;Name=WP_000402189.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=CCO47_RS21535;product=Na+/H+ antiporter;protein_id=WP_000402189.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4398537 4399886 . - . ID=gene-CCO47_RS21540;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=CCO47_RS21540;old_locus_tag=CCO47_21540 NZ_CP075113.1 Protein Homology CDS 4398537 4399886 . - 0 ID=cds-WP_000106907.1;Parent=gene-CCO47_RS21540;Dbxref=GenBank:WP_000106907.1;Name=WP_000106907.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=CCO47_RS21540;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_000106907.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4400234 4400902 . - . ID=gene-CCO47_RS21545;Name=CCO47_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21545;old_locus_tag=CCO47_21545 NZ_CP075113.1 Protein Homology CDS 4400234 4400902 . - 0 ID=cds-WP_000958572.1;Parent=gene-CCO47_RS21545;Dbxref=GenBank:WP_000958572.1;Name=WP_000958572.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463132.1;locus_tag=CCO47_RS21545;product=glutathione S-transferase family protein;protein_id=WP_000958572.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4401195 4401653 . - . ID=gene-CCO47_RS21550;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=CCO47_RS21550;old_locus_tag=CCO47_21550 NZ_CP075113.1 Protein Homology CDS 4401195 4401653 . - 0 ID=cds-WP_000412686.1;Parent=gene-CCO47_RS21550;Dbxref=GenBank:WP_000412686.1;Name=WP_000412686.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463131.1;locus_tag=CCO47_RS21550;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412686.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4401740 4402063 . + . ID=gene-CCO47_RS21555;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=CCO47_RS21555;old_locus_tag=CCO47_21555 NZ_CP075113.1 Protein Homology CDS 4401740 4402063 . + 0 ID=cds-WP_000019483.1;Parent=gene-CCO47_RS21555;Dbxref=GenBank:WP_000019483.1;Name=WP_000019483.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463130.1;locus_tag=CCO47_RS21555;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019483.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4402051 4403652 . - . ID=gene-CCO47_RS21560;Name=CCO47_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21560;old_locus_tag=CCO47_21560 NZ_CP075113.1 Protein Homology CDS 4402051 4403652 . - 0 ID=cds-WP_000083641.1;Parent=gene-CCO47_RS21560;Dbxref=GenBank:WP_000083641.1;Name=WP_000083641.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463129.1;locus_tag=CCO47_RS21560;product=EAL domain-containing protein;protein_id=WP_000083641.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4404215 4404496 . + . ID=gene-CCO47_RS21565;Name=CCO47_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21565;old_locus_tag=CCO47_21565 NZ_CP075113.1 Protein Homology CDS 4404215 4404496 . + 0 ID=cds-WP_000201429.1;Parent=gene-CCO47_RS21565;Dbxref=GenBank:WP_000201429.1;Name=WP_000201429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463128.1;locus_tag=CCO47_RS21565;product=YjcB family protein;protein_id=WP_000201429.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4404774 4406840 . - . ID=gene-CCO47_RS21570;Name=siiF;gbkey=Gene;gene=siiF;gene_biotype=protein_coding;locus_tag=CCO47_RS21570;old_locus_tag=CCO47_21570 NZ_CP075113.1 Protein Homology CDS 4404774 4406840 . - 0 ID=cds-WP_000358566.1;Parent=gene-CCO47_RS21570;Dbxref=GenBank:WP_000358566.1;Name=WP_000358566.1;gbkey=CDS;gene=siiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463127.1;locus_tag=CCO47_RS21570;product=SPI-4 type I secretion system protein SiiF;protein_id=WP_000358566.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4406880 4423559 . - . ID=gene-CCO47_RS21575;Name=siiE;gbkey=Gene;gene=siiE;gene_biotype=protein_coding;locus_tag=CCO47_RS21575;old_locus_tag=CCO47_21575 NZ_CP075113.1 Protein Homology CDS 4406880 4423559 . - 0 ID=cds-WP_000527232.1;Parent=gene-CCO47_RS21575;Dbxref=GenBank:WP_000527232.1;Name=WP_000527232.1;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=CCO47_RS21575;product=non-fimbrial adhesin SiiE;protein_id=WP_000527232.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4423576 4424853 . - . ID=gene-CCO47_RS21580;Name=siiD;gbkey=Gene;gene=siiD;gene_biotype=protein_coding;locus_tag=CCO47_RS21580;old_locus_tag=CCO47_21580 NZ_CP075113.1 Protein Homology CDS 4423576 4424853 . - 0 ID=cds-WP_001081936.1;Parent=gene-CCO47_RS21580;Dbxref=GenBank:WP_001081936.1;Name=WP_001081936.1;gbkey=CDS;gene=siiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=CCO47_RS21580;product=SPI-4 type I secretion system protein SiiD;protein_id=WP_001081936.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4424850 4426169 . - . ID=gene-CCO47_RS21585;Name=siiC;gbkey=Gene;gene=siiC;gene_biotype=protein_coding;locus_tag=CCO47_RS21585;old_locus_tag=CCO47_21585 NZ_CP075113.1 Protein Homology CDS 4424850 4426169 . - 0 ID=cds-WP_001675411.1;Parent=gene-CCO47_RS21585;Dbxref=GenBank:WP_001675411.1;Name=WP_001675411.1;gbkey=CDS;gene=siiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463124.1;locus_tag=CCO47_RS21585;product=SPI-4 type I secretion system protein SiiC;protein_id=WP_001675411.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4426159 4427547 . - . ID=gene-CCO47_RS21590;Name=CCO47_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21590;old_locus_tag=CCO47_21590 NZ_CP075113.1 Protein Homology CDS 4426159 4427547 . - 0 ID=cds-WP_000875181.1;Parent=gene-CCO47_RS21590;Dbxref=GenBank:WP_000875181.1;Name=WP_000875181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463123.1;locus_tag=CCO47_RS21590;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_000875181.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4427544 4428176 . - . ID=gene-CCO47_RS21595;Name=siiA;gbkey=Gene;gene=siiA;gene_biotype=protein_coding;locus_tag=CCO47_RS21595;old_locus_tag=CCO47_21595 NZ_CP075113.1 Protein Homology CDS 4427544 4428176 . - 0 ID=cds-WP_000389234.1;Parent=gene-CCO47_RS21595;Dbxref=GenBank:WP_000389234.1;Name=WP_000389234.1;gbkey=CDS;gene=siiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463122.1;locus_tag=CCO47_RS21595;product=SPI-4 type I secretion system auxiliary protein SiiA;protein_id=WP_000389234.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4429217 4429747 . - . ID=gene-CCO47_RS21600;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=CCO47_RS21600;old_locus_tag=CCO47_21600 NZ_CP075113.1 Protein Homology CDS 4429217 4429747 . - 0 ID=cds-WP_000168322.1;Parent=gene-CCO47_RS21600;Dbxref=GenBank:WP_000168322.1;Name=WP_000168322.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463121.1;locus_tag=CCO47_RS21600;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168322.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4429995 4432820 . + . ID=gene-CCO47_RS21605;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=CCO47_RS21605;old_locus_tag=CCO47_21605 NZ_CP075113.1 Protein Homology CDS 4429995 4432820 . + 0 ID=cds-WP_000357725.1;Parent=gene-CCO47_RS21605;Dbxref=GenBank:WP_000357725.1;Name=WP_000357725.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463119.1;locus_tag=CCO47_RS21605;product=excinuclease ABC subunit UvrA;protein_id=WP_000357725.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4432952 4433407 . + . ID=gene-CCO47_RS21610;Name=CCO47_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21610;old_locus_tag=CCO47_21610 NZ_CP075113.1 Protein Homology CDS 4432952 4433407 . + 0 ID=cds-WP_000432197.1;Parent=gene-CCO47_RS21610;Dbxref=GenBank:WP_000432197.1;Name=WP_000432197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463118.1;locus_tag=CCO47_RS21610;product=hypothetical protein;protein_id=WP_000432197.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4433394 4433732 . + . ID=gene-CCO47_RS21615;Name=CCO47_RS21615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21615;old_locus_tag=CCO47_21615 NZ_CP075113.1 Protein Homology CDS 4433394 4433732 . + 0 ID=cds-WP_000146599.1;Parent=gene-CCO47_RS21615;Dbxref=GenBank:WP_000146599.1;Name=WP_000146599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463117.1;locus_tag=CCO47_RS21615;product=membrane protein;protein_id=WP_000146599.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4433733 4434089 . - . ID=gene-CCO47_RS21620;Name=CCO47_RS21620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21620;old_locus_tag=CCO47_21620 NZ_CP075113.1 Protein Homology CDS 4433733 4434089 . - 0 ID=cds-WP_000155666.1;Parent=gene-CCO47_RS21620;Dbxref=GenBank:WP_000155666.1;Name=WP_000155666.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463116.1;locus_tag=CCO47_RS21620;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155666.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4434092 4434508 . - . ID=gene-CCO47_RS21625;Name=CCO47_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21625;old_locus_tag=CCO47_21625 NZ_CP075113.1 Protein Homology CDS 4434092 4434508 . - 0 ID=cds-WP_000270392.1;Parent=gene-CCO47_RS21625;Dbxref=GenBank:WP_000270392.1;Name=WP_000270392.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463115.1;locus_tag=CCO47_RS21625;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_000270392.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4434637 4435350 . - . ID=gene-CCO47_RS21630;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=CCO47_RS21630;old_locus_tag=CCO47_21630 NZ_CP075113.1 Protein Homology CDS 4434637 4435350 . - 0 ID=cds-WP_000724435.1;Parent=gene-CCO47_RS21630;Dbxref=GenBank:WP_000724435.1;Name=WP_000724435.1;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463114.1;locus_tag=CCO47_RS21630;product=acid phosphatase AphA;protein_id=WP_000724435.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4435537 4436730 . - . ID=gene-CCO47_RS21635;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=CCO47_RS21635;old_locus_tag=CCO47_21635 NZ_CP075113.1 Protein Homology CDS 4435537 4436730 . - 0 ID=cds-WP_000486902.1;Parent=gene-CCO47_RS21635;Dbxref=GenBank:WP_000486902.1;Name=WP_000486902.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463113.1;locus_tag=CCO47_RS21635;product=aromatic amino acid transaminase;protein_id=WP_000486902.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4436916 4437995 . - . ID=gene-CCO47_RS21640;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=CCO47_RS21640;old_locus_tag=CCO47_21640 NZ_CP075113.1 Protein Homology CDS 4436916 4437995 . - 0 ID=cds-WP_001147297.1;Parent=gene-CCO47_RS21640;Dbxref=GenBank:WP_001147297.1;Name=WP_001147297.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463112.1;locus_tag=CCO47_RS21640;product=alanine racemase;protein_id=WP_001147297.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4438027 4439442 . - . ID=gene-CCO47_RS21645;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=CCO47_RS21645;old_locus_tag=CCO47_21645 NZ_CP075113.1 Protein Homology CDS 4438027 4439442 . - 0 ID=cds-WP_000918353.1;Parent=gene-CCO47_RS21645;Dbxref=GenBank:WP_000918353.1;Name=WP_000918353.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463111.1;locus_tag=CCO47_RS21645;product=replicative DNA helicase;protein_id=WP_000918353.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4439507 4440490 . + . ID=gene-CCO47_RS21650;Name=CCO47_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21650;old_locus_tag=CCO47_21650 NZ_CP075113.1 Protein Homology CDS 4439507 4440490 . + 0 ID=cds-WP_000235558.1;Parent=gene-CCO47_RS21650;Dbxref=GenBank:WP_000235558.1;Name=WP_000235558.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463110.1;locus_tag=CCO47_RS21650;product=quinone oxidoreductase;protein_id=WP_000235558.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4440665 4440907 . - . ID=gene-CCO47_RS21655;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=CCO47_RS21655;old_locus_tag=CCO47_21655 NZ_CP075113.1 Protein Homology CDS 4440665 4440907 . - 0 ID=cds-WP_000891414.1;Parent=gene-CCO47_RS21655;Dbxref=GenBank:WP_000891414.1;Name=WP_000891414.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463109.1;locus_tag=CCO47_RS21655;product=envelope stress response protein PspG;protein_id=WP_000891414.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4441075 4442073 . - . ID=gene-CCO47_RS21660;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=CCO47_RS21660;old_locus_tag=CCO47_21660 NZ_CP075113.1 Protein Homology CDS 4441075 4442073 . - 0 ID=cds-WP_001182227.1;Parent=gene-CCO47_RS21660;Dbxref=GenBank:WP_001182227.1;Name=WP_001182227.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463108.1;locus_tag=CCO47_RS21660;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_001182227.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4442161 4443471 . - . ID=gene-CCO47_RS21665;Name=CCO47_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21665;old_locus_tag=CCO47_21665 NZ_CP075113.1 Protein Homology CDS 4442161 4443471 . - 0 ID=cds-WP_001039337.1;Parent=gene-CCO47_RS21665;Dbxref=GenBank:WP_001039337.1;Name=WP_001039337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=CCO47_RS21665;product=conjugal transfer protein TraF;protein_id=WP_001039337.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4443718 4444233 . + . ID=gene-CCO47_RS21670;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=CCO47_RS21670;old_locus_tag=CCO47_21670 NZ_CP075113.1 Protein Homology CDS 4443718 4444233 . + 0 ID=cds-WP_000416271.1;Parent=gene-CCO47_RS21670;Dbxref=GenBank:WP_000416271.1;Name=WP_000416271.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463106.1;locus_tag=CCO47_RS21670;product=zinc uptake transcriptional repressor Zur;protein_id=WP_000416271.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4444332 4444541 . - . ID=gene-CCO47_RS21675;Name=CCO47_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21675;old_locus_tag=CCO47_21675 NZ_CP075113.1 Protein Homology CDS 4444332 4444541 . - 0 ID=cds-WP_001030592.1;Parent=gene-CCO47_RS21675;Dbxref=GenBank:WP_001030592.1;Name=WP_001030592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=CCO47_RS21675;product=CsbD family protein;protein_id=WP_001030592.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4444563 4444676 . - . ID=gene-CCO47_RS21680;Name=CCO47_RS21680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21680;old_locus_tag=CCO47_21680 NZ_CP075113.1 Protein Homology CDS 4444563 4444676 . - 0 ID=cds-WP_001575282.1;Parent=gene-CCO47_RS21680;Dbxref=GenBank:WP_001575282.1;Name=WP_001575282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=CCO47_RS21680;product=hypothetical protein;protein_id=WP_001575282.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4444673 4445998 . - . ID=gene-CCO47_RS21685;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=CCO47_RS21685;old_locus_tag=CCO47_21685 NZ_CP075113.1 Protein Homology CDS 4444673 4445998 . - 0 ID=cds-WP_001128103.1;Parent=gene-CCO47_RS21685;Dbxref=GenBank:WP_001128103.1;Name=WP_001128103.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463103.1;locus_tag=CCO47_RS21685;product=MATE family efflux transporter DinF;protein_id=WP_001128103.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4446177 4446785 . - . ID=gene-CCO47_RS21690;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=CCO47_RS21690;old_locus_tag=CCO47_21690 NZ_CP075113.1 Protein Homology CDS 4446177 4446785 . - 0 ID=cds-WP_000646079.1;Parent=gene-CCO47_RS21690;Dbxref=GenBank:WP_000646079.1;Name=WP_000646079.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=CCO47_RS21690;product=transcriptional repressor LexA;protein_id=WP_000646079.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4446894 4447262 . - . ID=gene-CCO47_RS21695;Name=CCO47_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21695;old_locus_tag=CCO47_21695 NZ_CP075113.1 Protein Homology CDS 4446894 4447262 . - 0 ID=cds-WP_000002900.1;Parent=gene-CCO47_RS21695;Dbxref=GenBank:WP_000002900.1;Name=WP_000002900.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463101.1;locus_tag=CCO47_RS21695;product=diacylglycerol kinase;protein_id=WP_000002900.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4447433 4449853 . + . ID=gene-CCO47_RS21700;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=CCO47_RS21700;old_locus_tag=CCO47_21700 NZ_CP075113.1 Protein Homology CDS 4447433 4449853 . + 0 ID=cds-WP_000017360.1;Parent=gene-CCO47_RS21700;Dbxref=GenBank:WP_000017360.1;Name=WP_000017360.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=CCO47_RS21700;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_000017360.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4449952 4450824 . - . ID=gene-CCO47_RS21705;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=CCO47_RS21705;old_locus_tag=CCO47_21705 NZ_CP075113.1 Protein Homology CDS 4449952 4450824 . - 0 ID=cds-WP_000455249.1;Parent=gene-CCO47_RS21705;Dbxref=GenBank:WP_000455249.1;Name=WP_000455249.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463099.1;locus_tag=CCO47_RS21705;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455249.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4450838 4451335 . - . ID=gene-CCO47_RS21710;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=CCO47_RS21710;old_locus_tag=CCO47_21710 NZ_CP075113.1 Protein Homology CDS 4450838 4451335 . - 0 ID=cds-WP_000019230.1;Parent=gene-CCO47_RS21710;Dbxref=GenBank:WP_000019230.1;Name=WP_000019230.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463098.1;locus_tag=CCO47_RS21710;product=chorismate lyase;protein_id=WP_000019230.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4451516 4452433 . - . ID=gene-CCO47_RS21715;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=CCO47_RS21715;old_locus_tag=CCO47_21715 NZ_CP075113.1 Protein Homology CDS 4451516 4452433 . - 0 ID=cds-WP_000782490.1;Parent=gene-CCO47_RS21715;Dbxref=GenBank:WP_000782490.1;Name=WP_000782490.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463097.1;locus_tag=CCO47_RS21715;product=maltose operon protein MalM;protein_id=WP_000782490.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4452597 4453955 . - . ID=gene-CCO47_RS21720;Name=CCO47_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21720;old_locus_tag=CCO47_21720 NZ_CP075113.1 Protein Homology CDS 4452597 4453955 . - 0 ID=cds-WP_000973642.1;Parent=gene-CCO47_RS21720;Dbxref=GenBank:WP_000973642.1;Name=WP_000973642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463096.1;locus_tag=CCO47_RS21720;product=maltoporin;protein_id=WP_000973642.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4454044 4455153 . - . ID=gene-CCO47_RS21725;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=CCO47_RS21725;old_locus_tag=CCO47_21725 NZ_CP075113.1 Protein Homology CDS 4454044 4455153 . - 0 ID=cds-WP_000179176.1;Parent=gene-CCO47_RS21725;Dbxref=GenBank:WP_000179176.1;Name=WP_000179176.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=CCO47_RS21725;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_000179176.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4455515 4456705 . + . ID=gene-CCO47_RS21730;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=CCO47_RS21730;old_locus_tag=CCO47_21730 NZ_CP075113.1 Protein Homology CDS 4455515 4456705 . + 0 ID=cds-WP_000695415.1;Parent=gene-CCO47_RS21730;Dbxref=GenBank:WP_000695415.1;Name=WP_000695415.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=CCO47_RS21730;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695415.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4456654 4456794 . - . ID=gene-CCO47_RS24525;Name=CCO47_RS24525;end_range=4456794,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24525;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 4456654 4456794 . - 0 ID=cds-CCO47_RS24525;Parent=gene-CCO47_RS24525;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4456794,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO47_RS24525;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 4456837 4458381 . + . ID=gene-CCO47_RS21735;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=CCO47_RS21735;old_locus_tag=CCO47_21735 NZ_CP075113.1 Protein Homology CDS 4456837 4458381 . + 0 ID=cds-WP_000382572.1;Parent=gene-CCO47_RS21735;Dbxref=GenBank:WP_000382572.1;Name=WP_000382572.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=CCO47_RS21735;product=maltose ABC transporter permease MalF;protein_id=WP_000382572.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4458396 4459286 . + . ID=gene-CCO47_RS21740;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=CCO47_RS21740;old_locus_tag=CCO47_21740 NZ_CP075113.1 Protein Homology CDS 4458396 4459286 . + 0 ID=cds-WP_001252087.1;Parent=gene-CCO47_RS21740;Dbxref=GenBank:WP_001252087.1;Name=WP_001252087.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463092.1;locus_tag=CCO47_RS21740;product=maltose ABC transporter permease MalG;protein_id=WP_001252087.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4459452 4459862 . - . ID=gene-CCO47_RS21745;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=CCO47_RS21745;old_locus_tag=CCO47_21745 NZ_CP075113.1 Protein Homology CDS 4459452 4459862 . - 0 ID=cds-WP_000982749.1;Parent=gene-CCO47_RS21745;Dbxref=GenBank:WP_000982749.1;Name=WP_000982749.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463091.1;locus_tag=CCO47_RS21745;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000982749.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4460005 4462101 . - . ID=gene-CCO47_RS21750;Name=CCO47_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21750;old_locus_tag=CCO47_21750 NZ_CP075113.1 Protein Homology CDS 4460005 4462101 . - 0 ID=cds-WP_000750793.1;Parent=gene-CCO47_RS21750;Dbxref=GenBank:WP_000750793.1;Name=WP_000750793.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=CCO47_RS21750;product=YjbH domain-containing protein;protein_id=WP_000750793.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4462101 4462838 . - . ID=gene-CCO47_RS21755;Name=CCO47_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21755;old_locus_tag=CCO47_21755 NZ_CP075113.1 Protein Homology CDS 4462101 4462838 . - 0 ID=cds-WP_000977969.1;Parent=gene-CCO47_RS21755;Dbxref=GenBank:WP_000977969.1;Name=WP_000977969.1;Ontology_term=GO:0042603;gbkey=CDS;go_component=capsule|0042603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463089.1;locus_tag=CCO47_RS21755;product=capsule biosynthesis GfcC family protein;protein_id=WP_000977969.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4462835 4463473 . - . ID=gene-CCO47_RS21760;Name=CCO47_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21760;old_locus_tag=CCO47_21760 NZ_CP075113.1 Protein Homology CDS 4462835 4463473 . - 0 ID=cds-WP_000824806.1;Parent=gene-CCO47_RS21760;Dbxref=GenBank:WP_000824806.1;Name=WP_000824806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824802.1;locus_tag=CCO47_RS21760;product=YjbF family lipoprotein;protein_id=WP_000824806.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4463537 4463779 . - . ID=gene-CCO47_RS21765;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=CCO47_RS21765;old_locus_tag=CCO47_21765 NZ_CP075113.1 Protein Homology CDS 4463537 4463779 . - 0 ID=cds-WP_001541297.1;Parent=gene-CCO47_RS21765;Dbxref=GenBank:WP_001541297.1;Name=WP_001541297.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=CCO47_RS21765;product=exopolysaccharide production protein YjbE;protein_id=WP_001541297.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4464223 4465872 . - . ID=gene-CCO47_RS21770;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=CCO47_RS21770;old_locus_tag=CCO47_21770 NZ_CP075113.1 Protein Homology CDS 4464223 4465872 . - 0 ID=cds-WP_000790037.1;Parent=gene-CCO47_RS21770;Dbxref=GenBank:WP_000790037.1;Name=WP_000790037.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=CCO47_RS21770;product=glucose-6-phosphate isomerase;protein_id=WP_000790037.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4466260 4467609 . + . ID=gene-CCO47_RS21775;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=CCO47_RS21775;old_locus_tag=CCO47_21775 NZ_CP075113.1 Protein Homology CDS 4466260 4467609 . + 0 ID=cds-WP_000136394.1;Parent=gene-CCO47_RS21775;Dbxref=GenBank:WP_000136394.1;Name=WP_000136394.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=L-lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463085.1;locus_tag=CCO47_RS21775;product=lysine-sensitive aspartokinase 3;protein_id=WP_000136394.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4467740 4468087 . - . ID=gene-CCO47_RS21780;Name=CCO47_RS21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21780;old_locus_tag=CCO47_21780 NZ_CP075113.1 Protein Homology CDS 4467740 4468087 . - 0 ID=cds-WP_000615248.1;Parent=gene-CCO47_RS21780;Dbxref=GenBank:WP_000615248.1;Name=WP_000615248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615246.1;locus_tag=CCO47_RS21780;product=Mor transcription activator family protein;protein_id=WP_000615248.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4468410 4468634 . + . ID=gene-CCO47_RS24320;Name=CCO47_RS24320;end_range=4468634,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24320;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 4468410 4468634 . + 0 ID=cds-CCO47_RS24320;Parent=gene-CCO47_RS24320;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4468634,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463062.1;locus_tag=CCO47_RS24320;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 4468665 4468952 . + . ID=gene-CCO47_RS21785;Name=CCO47_RS21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21785;old_locus_tag=CCO47_21785 NZ_CP075113.1 Protein Homology CDS 4468665 4468952 . + 0 ID=cds-WP_001675416.1;Parent=gene-CCO47_RS21785;Dbxref=GenBank:WP_001675416.1;Name=WP_001675416.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025953.7;locus_tag=CCO47_RS21785;product=DapH/DapD/GlmU-related protein;protein_id=WP_001675416.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4469531 4470259 . + . ID=gene-CCO47_RS21790;Name=CCO47_RS21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21790;old_locus_tag=CCO47_21790 NZ_CP075113.1 Protein Homology CDS 4469531 4470259 . + 0 ID=cds-WP_000587744.1;Parent=gene-CCO47_RS21790;Dbxref=GenBank:WP_000587744.1;Name=WP_000587744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463061.1;locus_tag=CCO47_RS21790;product=hypothetical protein;protein_id=WP_000587744.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4470688 4472277 . + . ID=gene-CCO47_RS21795;Name=CCO47_RS21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21795;old_locus_tag=CCO47_21795 NZ_CP075113.1 Protein Homology CDS 4470688 4472277 . + 0 ID=cds-WP_000716850.1;Parent=gene-CCO47_RS21795;Dbxref=GenBank:WP_000716850.1;Name=WP_000716850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716843.1;locus_tag=CCO47_RS21795;product=PTS sugar transporter;protein_id=WP_000716850.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4472301 4473140 . + . ID=gene-CCO47_RS21800;Name=CCO47_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21800;old_locus_tag=CCO47_21800 NZ_CP075113.1 Protein Homology CDS 4472301 4473140 . + 0 ID=cds-WP_000472332.1;Parent=gene-CCO47_RS21800;Dbxref=GenBank:WP_000472332.1;Name=WP_000472332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000472335.1;locus_tag=CCO47_RS21800;product=beta/alpha barrel domain-containing protein;protein_id=WP_000472332.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4473157 4474020 . + . ID=gene-CCO47_RS21805;Name=CCO47_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21805;old_locus_tag=CCO47_21805 NZ_CP075113.1 Protein Homology CDS 4473157 4474020 . + 0 ID=cds-WP_000924640.1;Parent=gene-CCO47_RS21805;Dbxref=GenBank:WP_000924640.1;Name=WP_000924640.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000924639.1;locus_tag=CCO47_RS21805;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000924640.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4474007 4474765 . + . ID=gene-CCO47_RS21810;Name=CCO47_RS21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21810;old_locus_tag=CCO47_21810 NZ_CP075113.1 Protein Homology CDS 4474007 4474765 . + 0 ID=cds-WP_001068171.1;Parent=gene-CCO47_RS21810;Dbxref=GenBank:WP_001068171.1;Name=WP_001068171.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001068167.1;locus_tag=CCO47_RS21810;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001068171.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4474828 4475100 . + . ID=gene-CCO47_RS21815;Name=CCO47_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21815;old_locus_tag=CCO47_21815 NZ_CP075113.1 Protein Homology CDS 4474828 4475100 . + 0 ID=cds-WP_001207628.1;Parent=gene-CCO47_RS21815;Dbxref=GenBank:WP_001207628.1;Name=WP_001207628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463059.1;locus_tag=CCO47_RS21815;product=YjbD family protein;protein_id=WP_001207628.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4475097 4475966 . - . ID=gene-CCO47_RS21820;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=CCO47_RS21820;old_locus_tag=CCO47_21820 NZ_CP075113.1 Protein Homology CDS 4475097 4475966 . - 0 ID=cds-WP_000954605.1;Parent=gene-CCO47_RS21820;Dbxref=GenBank:WP_000954605.1;Name=WP_000954605.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=CCO47_RS21820;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_000954605.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4476013 4476552 . - . ID=gene-CCO47_RS21825;Name=CCO47_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21825;old_locus_tag=CCO47_21825 NZ_CP075113.1 Protein Homology CDS 4476013 4476552 . - 0 ID=cds-WP_001096731.1;Parent=gene-CCO47_RS21825;Dbxref=GenBank:WP_001096731.1;Name=WP_001096731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=CCO47_RS21825;product=DUF2058 domain-containing protein;protein_id=WP_001096731.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4476587 4476688 . - . ID=gene-CCO47_RS21830;Name=CCO47_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21830;old_locus_tag=CCO47_21830 NZ_CP075113.1 Protein Homology CDS 4476587 4476688 . - 0 ID=cds-WP_001576533.1;Parent=gene-CCO47_RS21830;Dbxref=GenBank:WP_001576533.1;Name=WP_001576533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=CCO47_RS21830;product=hypothetical protein;protein_id=WP_001576533.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4476760 4477464 . + . ID=gene-CCO47_RS21835;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=CCO47_RS21835;old_locus_tag=CCO47_21835 NZ_CP075113.1 Protein Homology CDS 4476760 4477464 . + 0 ID=cds-WP_000421779.1;Parent=gene-CCO47_RS21835;Dbxref=GenBank:WP_000421779.1;Name=WP_000421779.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421779.1;locus_tag=CCO47_RS21835;product=dipeptidase PepE;protein_id=WP_000421779.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4477524 4479155 . - . ID=gene-CCO47_RS21840;Name=CCO47_RS21840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21840;old_locus_tag=CCO47_21840 NZ_CP075113.1 Protein Homology CDS 4477524 4479155 . - 0 ID=cds-WP_000956811.1;Parent=gene-CCO47_RS21840;Dbxref=GenBank:WP_000956811.1;Name=WP_000956811.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=CCO47_RS21840;product=Na/Pi cotransporter family protein;protein_id=WP_000956811.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4479422 4483105 . - . ID=gene-CCO47_RS21845;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=CCO47_RS21845;old_locus_tag=CCO47_21845 NZ_CP075113.1 Protein Homology CDS 4479422 4483105 . - 0 ID=cds-WP_000095957.1;Parent=gene-CCO47_RS21845;Dbxref=GenBank:WP_000095957.1;Name=WP_000095957.1;Ontology_term=GO:0071265,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312964.1;locus_tag=CCO47_RS21845;product=methionine synthase;protein_id=WP_000095957.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4483409 4484233 . + . ID=gene-CCO47_RS21850;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=CCO47_RS21850;old_locus_tag=CCO47_21850 NZ_CP075113.1 Protein Homology CDS 4483409 4484233 . + 0 ID=cds-WP_000226434.1;Parent=gene-CCO47_RS21850;Dbxref=GenBank:WP_000226434.1;Name=WP_000226434.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463052.1;locus_tag=CCO47_RS21850;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_000226434.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4484244 4484651 . + . ID=gene-CCO47_RS21855;Name=CCO47_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21855;old_locus_tag=CCO47_21855 NZ_CP075113.1 Protein Homology CDS 4484244 4484651 . + 0 ID=cds-WP_010989091.1;Parent=gene-CCO47_RS21855;Dbxref=GenBank:WP_010989091.1;Name=WP_010989091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=CCO47_RS21855;product=ASCH domain-containing protein;protein_id=WP_010989091.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4484615 4486366 . - . ID=gene-CCO47_RS21860;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=CCO47_RS21860;old_locus_tag=CCO47_21860 NZ_CP075113.1 Protein Homology CDS 4484615 4486366 . - 0 ID=cds-WP_001137273.1;Parent=gene-CCO47_RS21860;Dbxref=GenBank:WP_001137273.1;Name=WP_001137273.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=CCO47_RS21860;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_001137273.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4486468 4487772 . - . ID=gene-CCO47_RS21865;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=CCO47_RS21865;old_locus_tag=CCO47_21865 NZ_CP075113.1 Protein Homology CDS 4486468 4487772 . - 0 ID=cds-WP_000857873.1;Parent=gene-CCO47_RS21865;Dbxref=GenBank:WP_000857873.1;Name=WP_000857873.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=CCO47_RS21865;product=isocitrate lyase;protein_id=WP_000857873.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4487804 4489405 . - . ID=gene-CCO47_RS21870;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=CCO47_RS21870;old_locus_tag=CCO47_21870 NZ_CP075113.1 Protein Homology CDS 4487804 4489405 . - 0 ID=cds-WP_001069371.1;Parent=gene-CCO47_RS21870;Dbxref=GenBank:WP_001069371.1;Name=WP_001069371.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463048.1;locus_tag=CCO47_RS21870;product=malate synthase A;protein_id=WP_001069371.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4489674 4490603 . - . ID=gene-CCO47_RS21875;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=CCO47_RS21875;old_locus_tag=CCO47_21875 NZ_CP075113.1 Protein Homology CDS 4489674 4490603 . - 0 ID=cds-WP_001122767.1;Parent=gene-CCO47_RS21875;Dbxref=GenBank:WP_001122767.1;Name=WP_001122767.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=CCO47_RS21875;product=homoserine O-acetyltransferase MetA;protein_id=WP_001122767.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4490760 4491197 . + . ID=gene-CCO47_RS21880;Name=CCO47_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21880;old_locus_tag=CCO47_21880 NZ_CP075113.1 Protein Homology CDS 4490760 4491197 . + 0 ID=cds-WP_000973249.1;Parent=gene-CCO47_RS21880;Dbxref=GenBank:WP_000973249.1;Name=WP_000973249.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463046.1;locus_tag=CCO47_RS21880;product=acetyltransferase;protein_id=WP_000973249.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4491363 4491478 . - . ID=gene-CCO47_RS21885;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO47_RS21885;old_locus_tag=CCO47_21885 NZ_CP075113.1 cmsearch rRNA 4491363 4491478 . - . ID=rna-CCO47_RS21885;Parent=gene-CCO47_RS21885;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS21885;product=5S ribosomal RNA NZ_CP075113.1 cmsearch exon 4491363 4491478 . - . ID=exon-CCO47_RS21885-1;Parent=rna-CCO47_RS21885;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS21885;product=5S ribosomal RNA NZ_CP075113.1 RefSeq gene 4491572 4494479 . - . ID=gene-CCO47_RS21890;Name=CCO47_RS21890;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO47_RS21890;old_locus_tag=CCO47_21890 NZ_CP075113.1 cmsearch rRNA 4491572 4494479 . - . ID=rna-CCO47_RS21890;Parent=gene-CCO47_RS21890;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS21890;product=23S ribosomal RNA NZ_CP075113.1 cmsearch exon 4491572 4494479 . - . ID=exon-CCO47_RS21890-1;Parent=rna-CCO47_RS21890;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS21890;product=23S ribosomal RNA NZ_CP075113.1 RefSeq gene 4494673 4494748 . - . ID=gene-CCO47_RS21895;Name=CCO47_RS21895;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS21895;old_locus_tag=CCO47_21895 NZ_CP075113.1 tRNAscan-SE tRNA 4494673 4494748 . - . ID=rna-CCO47_RS21895;Parent=gene-CCO47_RS21895;anticodon=(pos:complement(4494712..4494714));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS21895;product=tRNA-Glu NZ_CP075113.1 tRNAscan-SE exon 4494673 4494748 . - . ID=exon-CCO47_RS21895-1;Parent=rna-CCO47_RS21895;anticodon=(pos:complement(4494712..4494714));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS21895;product=tRNA-Glu NZ_CP075113.1 RefSeq gene 4494834 4496375 . - . ID=gene-CCO47_RS21900;Name=CCO47_RS21900;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO47_RS21900;old_locus_tag=CCO47_21900 NZ_CP075113.1 cmsearch rRNA 4494834 4496375 . - . ID=rna-CCO47_RS21900;Parent=gene-CCO47_RS21900;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS21900;product=16S ribosomal RNA NZ_CP075113.1 cmsearch exon 4494834 4496375 . - . ID=exon-CCO47_RS21900-1;Parent=rna-CCO47_RS21900;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS21900;product=16S ribosomal RNA NZ_CP075113.1 RefSeq gene 4497001 4498590 . + . ID=gene-CCO47_RS21905;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=CCO47_RS21905;old_locus_tag=CCO47_21905 NZ_CP075113.1 Protein Homology CDS 4497001 4498590 . + 0 ID=cds-WP_001187491.1;Parent=gene-CCO47_RS21905;Dbxref=GenBank:WP_001187491.1;Name=WP_001187491.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=CCO47_RS21905;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_001187491.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4498606 4499895 . + . ID=gene-CCO47_RS21910;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=CCO47_RS21910;old_locus_tag=CCO47_21910 NZ_CP075113.1 Protein Homology CDS 4498606 4499895 . + 0 ID=cds-WP_000866784.1;Parent=gene-CCO47_RS21910;Dbxref=GenBank:WP_000866784.1;Name=WP_000866784.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463044.1;locus_tag=CCO47_RS21910;product=phosphoribosylamine--glycine ligase;protein_id=WP_000866784.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4499892 4501217 . - . ID=gene-CCO47_RS21915;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=CCO47_RS21915;old_locus_tag=CCO47_21915 NZ_CP075113.1 Protein Homology CDS 4499892 4501217 . - 0 ID=cds-WP_000617936.1;Parent=gene-CCO47_RS21915;Dbxref=GenBank:WP_000617936.1;Name=WP_000617936.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463043.1;locus_tag=CCO47_RS21915;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_000617936.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4501223 4502620 . - . ID=gene-CCO47_RS21920;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=CCO47_RS21920;old_locus_tag=CCO47_21920 NZ_CP075113.1 Protein Homology CDS 4501223 4502620 . - 0 ID=cds-WP_001525338.1;Parent=gene-CCO47_RS21920;Dbxref=GenBank:WP_001525338.1;Name=WP_001525338.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463042.1;locus_tag=CCO47_RS21920;product=two-component system sensor histidine kinase ZraS;protein_id=WP_001525338.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4502874 4503329 . + . ID=gene-CCO47_RS21925;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=CCO47_RS21925;old_locus_tag=CCO47_21925 NZ_CP075113.1 Protein Homology CDS 4502874 4503329 . + 0 ID=cds-WP_000828129.1;Parent=gene-CCO47_RS21925;Dbxref=GenBank:WP_000828129.1;Name=WP_000828129.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463041.1;locus_tag=CCO47_RS21925;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_000828129.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4503371 4504063 . - . ID=gene-CCO47_RS21930;Name=CCO47_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21930;old_locus_tag=CCO47_21930 NZ_CP075113.1 Protein Homology CDS 4503371 4504063 . - 0 ID=cds-WP_001083931.1;Parent=gene-CCO47_RS21930;Dbxref=GenBank:WP_001083931.1;Name=WP_001083931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463040.1;locus_tag=CCO47_RS21930;product=DUF1481 domain-containing protein;protein_id=WP_001083931.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4504075 4504347 . - . ID=gene-CCO47_RS21935;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=CCO47_RS21935;old_locus_tag=CCO47_21935 NZ_CP075113.1 Protein Homology CDS 4504075 4504347 . - 0 ID=cds-WP_001044509.1;Parent=gene-CCO47_RS21935;Dbxref=GenBank:WP_001044509.1;Name=WP_001044509.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=CCO47_RS21935;product=nucleoid-associated protein HU-alpha;protein_id=WP_001044509.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4504534 4505124 . - . ID=gene-CCO47_RS21940;Name=CCO47_RS21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21940;old_locus_tag=CCO47_21940 NZ_CP075113.1 Protein Homology CDS 4504534 4505124 . - 0 ID=cds-WP_000940092.1;Parent=gene-CCO47_RS21940;Dbxref=GenBank:WP_000940092.1;Name=WP_000940092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463038.1;locus_tag=CCO47_RS21940;product=YjaG family protein;protein_id=WP_000940092.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4505166 4505837 . - . ID=gene-CCO47_RS21945;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=CCO47_RS21945;old_locus_tag=CCO47_21945 NZ_CP075113.1 Protein Homology CDS 4505166 4505837 . - 0 ID=cds-WP_000362359.1;Parent=gene-CCO47_RS21945;Dbxref=GenBank:WP_000362359.1;Name=WP_000362359.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463037.1;locus_tag=CCO47_RS21945;product=deoxyribonuclease V;protein_id=WP_000362359.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4505847 4506911 . - . ID=gene-CCO47_RS21950;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=CCO47_RS21950;old_locus_tag=CCO47_21950 NZ_CP075113.1 Protein Homology CDS 4505847 4506911 . - 0 ID=cds-WP_000137622.1;Parent=gene-CCO47_RS21950;Dbxref=GenBank:WP_000137622.1;Name=WP_000137622.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463036.2;locus_tag=CCO47_RS21950;product=uroporphyrinogen decarboxylase;protein_id=WP_000137622.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4506952 4507725 . - . ID=gene-CCO47_RS21955;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=CCO47_RS21955;old_locus_tag=CCO47_21955 NZ_CP075113.1 Protein Homology CDS 4506952 4507725 . - 0 ID=cds-WP_000373958.1;Parent=gene-CCO47_RS21955;Dbxref=GenBank:WP_000373958.1;Name=WP_000373958.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463035.1;locus_tag=CCO47_RS21955;product=NAD(+) diphosphatase;protein_id=WP_000373958.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4507818 4508306 . + . ID=gene-CCO47_RS21960;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=CCO47_RS21960;old_locus_tag=CCO47_21960 NZ_CP075113.1 Protein Homology CDS 4507818 4508306 . + 0 ID=cds-WP_000934315.1;Parent=gene-CCO47_RS21960;Dbxref=GenBank:WP_000934315.1;Name=WP_000934315.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463034.1;locus_tag=CCO47_RS21960;product=sigma D regulator;protein_id=WP_000934315.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4508670 4510565 . + . ID=gene-CCO47_RS21965;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=CCO47_RS21965;old_locus_tag=CCO47_21965 NZ_CP075113.1 Protein Homology CDS 4508670 4510565 . + 0 ID=cds-WP_000108424.1;Parent=gene-CCO47_RS21965;Dbxref=GenBank:WP_000108424.1;Name=WP_000108424.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463033.1;locus_tag=CCO47_RS21965;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_000108424.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4510565 4511200 . + . ID=gene-CCO47_RS21970;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=CCO47_RS21970;old_locus_tag=CCO47_21970 NZ_CP075113.1 Protein Homology CDS 4510565 4511200 . + 0 ID=cds-WP_000284639.1;Parent=gene-CCO47_RS21970;Dbxref=GenBank:WP_000284639.1;Name=WP_000284639.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463032.1;locus_tag=CCO47_RS21970;product=thiamine phosphate synthase;protein_id=WP_000284639.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4511193 4511951 . + . ID=gene-CCO47_RS21975;Name=CCO47_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21975;old_locus_tag=CCO47_21975 NZ_CP075113.1 Protein Homology CDS 4511193 4511951 . + 0 ID=cds-WP_000999758.1;Parent=gene-CCO47_RS21975;Dbxref=GenBank:WP_000999758.1;Name=WP_000999758.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463031.1;locus_tag=CCO47_RS21975;product=HesA/MoeB/ThiF family protein;protein_id=WP_000999758.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4511932 4512132 . + . ID=gene-CCO47_RS21980;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=CCO47_RS21980;old_locus_tag=CCO47_21980 NZ_CP075113.1 Protein Homology CDS 4511932 4512132 . + 0 ID=cds-WP_001166833.1;Parent=gene-CCO47_RS21980;Dbxref=GenBank:WP_001166833.1;Name=WP_001166833.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=CCO47_RS21980;product=sulfur carrier protein ThiS;protein_id=WP_001166833.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4512134 4512904 . + . ID=gene-CCO47_RS21985;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=CCO47_RS21985;old_locus_tag=CCO47_21985 NZ_CP075113.1 Protein Homology CDS 4512134 4512904 . + 0 ID=cds-WP_000944080.1;Parent=gene-CCO47_RS21985;Dbxref=GenBank:WP_000944080.1;Name=WP_000944080.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463029.1;locus_tag=CCO47_RS21985;product=thiazole synthase;protein_id=WP_000944080.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4512901 4514034 . + . ID=gene-CCO47_RS21990;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=CCO47_RS21990;old_locus_tag=CCO47_21990 NZ_CP075113.1 Protein Homology CDS 4512901 4514034 . + 0 ID=cds-WP_000847489.1;Parent=gene-CCO47_RS21990;Dbxref=GenBank:WP_000847489.1;Name=WP_000847489.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=CCO47_RS21990;product=2-iminoacetate synthase ThiH;protein_id=WP_000847489.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4514254 4515282 . - . ID=gene-CCO47_RS21995;Name=CCO47_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS21995;old_locus_tag=CCO47_21995 NZ_CP075113.1 Protein Homology CDS 4514254 4515282 . - 0 ID=cds-WP_000400602.1;Parent=gene-CCO47_RS21995;Dbxref=GenBank:WP_000400602.1;Name=WP_000400602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400600.1;locus_tag=CCO47_RS21995;product=type III secretion system effector arginine glycosyltransferase SseK1;protein_id=WP_000400602.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4515686 4516006 . + . ID=gene-CCO47_RS22000;Name=CCO47_RS22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22000;old_locus_tag=CCO47_22000 NZ_CP075113.1 Protein Homology CDS 4515686 4516006 . + 0 ID=cds-WP_077906655.1;Parent=gene-CCO47_RS22000;Dbxref=GenBank:WP_077906655.1;Name=WP_077906655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001654076.1;locus_tag=CCO47_RS22000;product=cytoplasmic protein;protein_id=WP_077906655.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4516008 4516289 . - . ID=gene-CCO47_RS22005;Name=CCO47_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22005;old_locus_tag=CCO47_22005 NZ_CP075113.1 Protein Homology CDS 4516008 4516289 . - 0 ID=cds-WP_001110911.1;Parent=gene-CCO47_RS22005;Dbxref=GenBank:WP_001110911.1;Name=WP_001110911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001110920.1;locus_tag=CCO47_RS22005;product=hypothetical protein;protein_id=WP_001110911.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4516372 4520595 . - . ID=gene-CCO47_RS22010;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=CCO47_RS22010;old_locus_tag=CCO47_22010 NZ_CP075113.1 Protein Homology CDS 4516372 4520595 . - 0 ID=cds-WP_000653967.1;Parent=gene-CCO47_RS22010;Dbxref=GenBank:WP_000653967.1;Name=WP_000653967.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463023.1;locus_tag=CCO47_RS22010;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000653967.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4520672 4524700 . - . ID=gene-CCO47_RS22015;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=CCO47_RS22015;old_locus_tag=CCO47_22015 NZ_CP075113.1 Protein Homology CDS 4520672 4524700 . - 0 ID=cds-WP_000263105.1;Parent=gene-CCO47_RS22015;Dbxref=GenBank:WP_000263105.1;Name=WP_000263105.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=CCO47_RS22015;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000263105.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4525018 4525383 . - . ID=gene-CCO47_RS22020;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=CCO47_RS22020;old_locus_tag=CCO47_22020 NZ_CP075113.1 Protein Homology CDS 4525018 4525383 . - 0 ID=cds-WP_000028882.1;Parent=gene-CCO47_RS22020;Dbxref=GenBank:WP_000028882.1;Name=WP_000028882.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=CCO47_RS22020;product=50S ribosomal protein L7/L12;protein_id=WP_000028882.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4525450 4525947 . - . ID=gene-CCO47_RS22025;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=CCO47_RS22025;old_locus_tag=CCO47_22025 NZ_CP075113.1 Protein Homology CDS 4525450 4525947 . - 0 ID=cds-WP_001207203.1;Parent=gene-CCO47_RS22025;Dbxref=GenBank:WP_001207203.1;Name=WP_001207203.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=CCO47_RS22025;product=50S ribosomal protein L10;protein_id=WP_001207203.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4526367 4527071 . - . ID=gene-CCO47_RS22030;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=CCO47_RS22030;old_locus_tag=CCO47_22030 NZ_CP075113.1 Protein Homology CDS 4526367 4527071 . - 0 ID=cds-WP_001096676.1;Parent=gene-CCO47_RS22030;Dbxref=GenBank:WP_001096676.1;Name=WP_001096676.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463019.1;locus_tag=CCO47_RS22030;product=50S ribosomal protein L1;protein_id=WP_001096676.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4527075 4527503 . - . ID=gene-CCO47_RS22035;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=CCO47_RS22035;old_locus_tag=CCO47_22035 NZ_CP075113.1 Protein Homology CDS 4527075 4527503 . - 0 ID=cds-WP_001085926.1;Parent=gene-CCO47_RS22035;Dbxref=GenBank:WP_001085926.1;Name=WP_001085926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=CCO47_RS22035;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4527661 4528206 . - . ID=gene-CCO47_RS22040;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=CCO47_RS22040;old_locus_tag=CCO47_22040 NZ_CP075113.1 Protein Homology CDS 4527661 4528206 . - 0 ID=cds-WP_001287521.1;Parent=gene-CCO47_RS22040;Dbxref=GenBank:WP_001287521.1;Name=WP_001287521.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=CCO47_RS22040;product=transcription termination/antitermination protein NusG;protein_id=WP_001287521.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4528208 4528591 . - . ID=gene-CCO47_RS22045;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=CCO47_RS22045;old_locus_tag=CCO47_22045 NZ_CP075113.1 Protein Homology CDS 4528208 4528591 . - 0 ID=cds-WP_001275691.1;Parent=gene-CCO47_RS22045;Dbxref=GenBank:WP_001275691.1;Name=WP_001275691.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=CCO47_RS22045;product=preprotein translocase subunit SecE;protein_id=WP_001275691.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4528821 4530005 . - . ID=gene-CCO47_RS22050;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=CCO47_RS22050;old_locus_tag=CCO47_22050 NZ_CP075113.1 Protein Homology CDS 4528821 4530005 . - 0 ID=cds-WP_000031748.1-2;Parent=gene-CCO47_RS22050;Dbxref=GenBank:WP_000031748.1;Name=WP_000031748.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=CCO47_RS22050;product=elongation factor Tu;protein_id=WP_000031748.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4530121 4530196 . - . ID=gene-CCO47_RS22055;Name=CCO47_RS22055;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS22055;old_locus_tag=CCO47_22055 NZ_CP075113.1 tRNAscan-SE tRNA 4530121 4530196 . - . ID=rna-CCO47_RS22055;Parent=gene-CCO47_RS22055;anticodon=(pos:complement(4530161..4530163));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS22055;product=tRNA-Thr NZ_CP075113.1 tRNAscan-SE exon 4530121 4530196 . - . ID=exon-CCO47_RS22055-1;Parent=rna-CCO47_RS22055;anticodon=(pos:complement(4530161..4530163));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS22055;product=tRNA-Thr NZ_CP075113.1 RefSeq gene 4530203 4530277 . - . ID=gene-CCO47_RS22060;Name=CCO47_RS22060;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS22060;old_locus_tag=CCO47_22060 NZ_CP075113.1 tRNAscan-SE tRNA 4530203 4530277 . - . ID=rna-CCO47_RS22060;Parent=gene-CCO47_RS22060;anticodon=(pos:complement(4530242..4530244));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS22060;product=tRNA-Gly NZ_CP075113.1 tRNAscan-SE exon 4530203 4530277 . - . ID=exon-CCO47_RS22060-1;Parent=rna-CCO47_RS22060;anticodon=(pos:complement(4530242..4530244));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS22060;product=tRNA-Gly NZ_CP075113.1 RefSeq gene 4530394 4530478 . - . ID=gene-CCO47_RS22065;Name=CCO47_RS22065;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS22065;old_locus_tag=CCO47_22065 NZ_CP075113.1 tRNAscan-SE tRNA 4530394 4530478 . - . ID=rna-CCO47_RS22065;Parent=gene-CCO47_RS22065;anticodon=(pos:complement(4530442..4530444));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS22065;product=tRNA-Tyr NZ_CP075113.1 tRNAscan-SE exon 4530394 4530478 . - . ID=exon-CCO47_RS22065-1;Parent=rna-CCO47_RS22065;anticodon=(pos:complement(4530442..4530444));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS22065;product=tRNA-Tyr NZ_CP075113.1 RefSeq gene 4530487 4530562 . - . ID=gene-CCO47_RS22070;Name=CCO47_RS22070;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS22070;old_locus_tag=CCO47_22070 NZ_CP075113.1 tRNAscan-SE tRNA 4530487 4530562 . - . ID=rna-CCO47_RS22070;Parent=gene-CCO47_RS22070;anticodon=(pos:complement(4530527..4530529));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS22070;product=tRNA-Thr NZ_CP075113.1 tRNAscan-SE exon 4530487 4530562 . - . ID=exon-CCO47_RS22070-1;Parent=rna-CCO47_RS22070;anticodon=(pos:complement(4530527..4530529));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS22070;product=tRNA-Thr NZ_CP075113.1 RefSeq gene 4530582 4530755 . + . ID=gene-CCO47_RS22075;Name=CCO47_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22075;old_locus_tag=CCO47_22075 NZ_CP075113.1 Protein Homology CDS 4530582 4530755 . + 0 ID=cds-WP_001541267.1;Parent=gene-CCO47_RS22075;Dbxref=GenBank:WP_001541267.1;Name=WP_001541267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=CCO47_RS22075;product=hypothetical protein;protein_id=WP_001541267.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4530964 4531914 . + . ID=gene-CCO47_RS22080;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=CCO47_RS22080;old_locus_tag=CCO47_22080 NZ_CP075113.1 Protein Homology CDS 4530964 4531914 . + 0 ID=cds-WP_000023069.1;Parent=gene-CCO47_RS22080;Dbxref=GenBank:WP_000023069.1;Name=WP_000023069.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=CCO47_RS22080;product=type I pantothenate kinase;protein_id=WP_000023069.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4531949 4532911 . - . ID=gene-CCO47_RS22085;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=CCO47_RS22085;old_locus_tag=CCO47_22085 NZ_CP075113.1 Protein Homology CDS 4531949 4532911 . - 0 ID=cds-WP_000655746.1;Parent=gene-CCO47_RS22085;Dbxref=GenBank:WP_000655746.1;Name=WP_000655746.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463012.1;locus_tag=CCO47_RS22085;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_000655746.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4532908 4533936 . - . ID=gene-CCO47_RS22090;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=CCO47_RS22090;old_locus_tag=CCO47_22090 NZ_CP075113.1 Protein Homology CDS 4532908 4533936 . - 0 ID=cds-WP_000149781.1;Parent=gene-CCO47_RS22090;Dbxref=GenBank:WP_000149781.1;Name=WP_000149781.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463011.1;locus_tag=CCO47_RS22090;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_000149781.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4534118 4534233 . - . ID=gene-CCO47_RS22095;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO47_RS22095;old_locus_tag=CCO47_22095 NZ_CP075113.1 cmsearch rRNA 4534118 4534233 . - . ID=rna-CCO47_RS22095;Parent=gene-CCO47_RS22095;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS22095;product=5S ribosomal RNA NZ_CP075113.1 cmsearch exon 4534118 4534233 . - . ID=exon-CCO47_RS22095-1;Parent=rna-CCO47_RS22095;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS22095;product=5S ribosomal RNA NZ_CP075113.1 RefSeq gene 4534327 4537234 . - . ID=gene-CCO47_RS22100;Name=CCO47_RS22100;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO47_RS22100;old_locus_tag=CCO47_22100 NZ_CP075113.1 cmsearch rRNA 4534327 4537234 . - . ID=rna-CCO47_RS22100;Parent=gene-CCO47_RS22100;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS22100;product=23S ribosomal RNA NZ_CP075113.1 cmsearch exon 4534327 4537234 . - . ID=exon-CCO47_RS22100-1;Parent=rna-CCO47_RS22100;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS22100;product=23S ribosomal RNA NZ_CP075113.1 RefSeq gene 4537417 4537492 . - . ID=gene-CCO47_RS22105;Name=CCO47_RS22105;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS22105;old_locus_tag=CCO47_22105 NZ_CP075113.1 tRNAscan-SE tRNA 4537417 4537492 . - . ID=rna-CCO47_RS22105;Parent=gene-CCO47_RS22105;anticodon=(pos:complement(4537457..4537459));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS22105;product=tRNA-Ala NZ_CP075113.1 tRNAscan-SE exon 4537417 4537492 . - . ID=exon-CCO47_RS22105-1;Parent=rna-CCO47_RS22105;anticodon=(pos:complement(4537457..4537459));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS22105;product=tRNA-Ala NZ_CP075113.1 RefSeq gene 4537602 4537678 . - . ID=gene-CCO47_RS22110;Name=CCO47_RS22110;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS22110;old_locus_tag=CCO47_22110 NZ_CP075113.1 tRNAscan-SE tRNA 4537602 4537678 . - . ID=rna-CCO47_RS22110;Parent=gene-CCO47_RS22110;anticodon=(pos:complement(4537642..4537644));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS22110;product=tRNA-Ile NZ_CP075113.1 tRNAscan-SE exon 4537602 4537678 . - . ID=exon-CCO47_RS22110-1;Parent=rna-CCO47_RS22110;anticodon=(pos:complement(4537642..4537644));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS22110;product=tRNA-Ile NZ_CP075113.1 RefSeq gene 4537748 4539289 . - . ID=gene-CCO47_RS22115;Name=CCO47_RS22115;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO47_RS22115;old_locus_tag=CCO47_22115 NZ_CP075113.1 cmsearch rRNA 4537748 4539289 . - . ID=rna-CCO47_RS22115;Parent=gene-CCO47_RS22115;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS22115;product=16S ribosomal RNA NZ_CP075113.1 cmsearch exon 4537748 4539289 . - . ID=exon-CCO47_RS22115-1;Parent=rna-CCO47_RS22115;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS22115;product=16S ribosomal RNA NZ_CP075113.1 RefSeq gene 4539669 4540520 . - . ID=gene-CCO47_RS22120;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=CCO47_RS22120;old_locus_tag=CCO47_22120 NZ_CP075113.1 Protein Homology CDS 4539669 4540520 . - 0 ID=cds-WP_000201805.1;Parent=gene-CCO47_RS22120;Dbxref=GenBank:WP_000201805.1;Name=WP_000201805.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=CCO47_RS22120;product=glutamate racemase;protein_id=WP_000201805.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4540465 4542309 . - . ID=gene-CCO47_RS22125;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=CCO47_RS22125;old_locus_tag=CCO47_22125 NZ_CP075113.1 Protein Homology CDS 4540465 4542309 . - 0 ID=cds-WP_000591401.1;Parent=gene-CCO47_RS22125;Dbxref=GenBank:WP_000591401.1;Name=WP_000591401.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463009.1;locus_tag=CCO47_RS22125;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_000591401.1;transl_table=11 NZ_CP075113.1 cmsearch riboswitch 4542376 4542568 . - . ID=id-NZ_CP075113.1:4542376..4542568;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CP075113.1 RefSeq gene 4542683 4543783 . + . ID=gene-CCO47_RS22130;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=CCO47_RS22130;old_locus_tag=CCO47_22130 NZ_CP075113.1 Protein Homology CDS 4542683 4543783 . + 0 ID=cds-WP_000186981.1;Parent=gene-CCO47_RS22130;Dbxref=GenBank:WP_000186981.1;Name=WP_000186981.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463008.1;locus_tag=CCO47_RS22130;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_000186981.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4543830 4544189 . - . ID=gene-CCO47_RS22135;Name=CCO47_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22135;old_locus_tag=CCO47_22135 NZ_CP075113.1 Protein Homology CDS 4543830 4544189 . - 0 ID=cds-WP_000813838.1;Parent=gene-CCO47_RS22135;Dbxref=GenBank:WP_000813838.1;Name=WP_000813838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463007.1;locus_tag=CCO47_RS22135;product=YijD family membrane protein;protein_id=WP_000813838.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4544205 4544840 . - . ID=gene-CCO47_RS22140;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=CCO47_RS22140;old_locus_tag=CCO47_22140 NZ_CP075113.1 Protein Homology CDS 4544205 4544840 . - 0 ID=cds-WP_000971958.1;Parent=gene-CCO47_RS22140;Dbxref=GenBank:WP_000971958.1;Name=WP_000971958.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463006.3;locus_tag=CCO47_RS22140;product=HTH-type transcriptional repressor FabR;protein_id=WP_000971958.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4545039 4546439 . + . ID=gene-CCO47_RS22145;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=CCO47_RS22145;old_locus_tag=CCO47_22145 NZ_CP075113.1 Protein Homology CDS 4545039 4546439 . + 0 ID=cds-WP_001120788.1;Parent=gene-CCO47_RS22145;Dbxref=GenBank:WP_001120788.1;Name=WP_001120788.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=CCO47_RS22145;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120788.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4546422 4547339 . - . ID=gene-CCO47_RS22150;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=CCO47_RS22150;old_locus_tag=CCO47_22150 NZ_CP075113.1 Protein Homology CDS 4546422 4547339 . - 0 ID=cds-WP_001025919.1;Parent=gene-CCO47_RS22150;Dbxref=GenBank:WP_001025919.1;Name=WP_001025919.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=CCO47_RS22150;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025919.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4547623 4548999 . - . ID=gene-CCO47_RS22155;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=CCO47_RS22155;old_locus_tag=CCO47_22155 NZ_CP075113.1 Protein Homology CDS 4547623 4548999 . - 0 ID=cds-WP_001230062.1;Parent=gene-CCO47_RS22155;Dbxref=GenBank:WP_001230062.1;Name=WP_001230062.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463003.1;locus_tag=CCO47_RS22155;product=argininosuccinate lyase;protein_id=WP_001230062.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4549117 4549893 . - . ID=gene-CCO47_RS22160;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=CCO47_RS22160;old_locus_tag=CCO47_22160 NZ_CP075113.1 Protein Homology CDS 4549117 4549893 . - 0 ID=cds-WP_001575262.1;Parent=gene-CCO47_RS22160;Dbxref=GenBank:WP_001575262.1;Name=WP_001575262.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=CCO47_RS22160;product=acetylglutamate kinase;protein_id=WP_001575262.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4549901 4550905 . - . ID=gene-CCO47_RS22165;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=CCO47_RS22165;old_locus_tag=CCO47_22165 NZ_CP075113.1 Protein Homology CDS 4549901 4550905 . - 0 ID=cds-WP_000935332.1;Parent=gene-CCO47_RS22165;Dbxref=GenBank:WP_000935332.1;Name=WP_000935332.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=CCO47_RS22165;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_000935332.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4550994 4552145 . + . ID=gene-CCO47_RS22170;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=CCO47_RS22170;old_locus_tag=CCO47_22170 NZ_CP075113.1 Protein Homology CDS 4550994 4552145 . + 0 ID=cds-WP_000800208.1;Parent=gene-CCO47_RS22170;Dbxref=GenBank:WP_000800208.1;Name=WP_000800208.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463000.1;locus_tag=CCO47_RS22170;product=acetylornithine deacetylase;protein_id=WP_000800208.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4552514 4555165 . + . ID=gene-CCO47_RS22175;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=CCO47_RS22175;old_locus_tag=CCO47_22175 NZ_CP075113.1 Protein Homology CDS 4552514 4555165 . + 0 ID=cds-WP_001005548.1;Parent=gene-CCO47_RS22175;Dbxref=GenBank:WP_001005548.1;Name=WP_001005548.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=CCO47_RS22175;product=phosphoenolpyruvate carboxylase;protein_id=WP_001005548.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4555376 4557109 . + . ID=gene-CCO47_RS22180;Name=CCO47_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22180;old_locus_tag=CCO47_22180 NZ_CP075113.1 Protein Homology CDS 4555376 4557109 . + 0 ID=cds-WP_001192093.1;Parent=gene-CCO47_RS22180;Dbxref=GenBank:WP_001192093.1;Name=WP_001192093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462998.1;locus_tag=CCO47_RS22180;product=phosphoethanolamine transferase CptA;protein_id=WP_001192093.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4557270 4558121 . + . ID=gene-CCO47_RS22185;Name=CCO47_RS22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22185;old_locus_tag=CCO47_22185 NZ_CP075113.1 Protein Homology CDS 4557270 4558121 . + 0 ID=cds-WP_000274596.1;Parent=gene-CCO47_RS22185;Dbxref=GenBank:WP_000274596.1;Name=WP_000274596.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462997.1;locus_tag=CCO47_RS22185;product=helix-turn-helix transcriptional regulator;protein_id=WP_000274596.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4558108 4558461 . - . ID=gene-CCO47_RS22190;Name=CCO47_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22190;old_locus_tag=CCO47_22190 NZ_CP075113.1 Protein Homology CDS 4558108 4558461 . - 0 ID=cds-WP_000290522.1;Parent=gene-CCO47_RS22190;Dbxref=GenBank:WP_000290522.1;Name=WP_000290522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462996.1;locus_tag=CCO47_RS22190;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000290522.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4558463 4559341 . - . ID=gene-CCO47_RS22195;Name=CCO47_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22195;old_locus_tag=CCO47_22195 NZ_CP075113.1 Protein Homology CDS 4558463 4559341 . - 0 ID=cds-WP_000171724.1;Parent=gene-CCO47_RS22195;Dbxref=GenBank:WP_000171724.1;Name=WP_000171724.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462995.1;locus_tag=CCO47_RS22195;product=[formate-C-acetyltransferase]-activating enzyme;protein_id=WP_000171724.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4559307 4561604 . - . ID=gene-CCO47_RS22200;Name=CCO47_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22200;old_locus_tag=CCO47_22200 NZ_CP075113.1 Protein Homology CDS 4559307 4561604 . - 0 ID=cds-WP_000149710.1;Parent=gene-CCO47_RS22200;Dbxref=GenBank:WP_000149710.1;Name=WP_000149710.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462994.1;locus_tag=CCO47_RS22200;product=formate C-acetyltransferase;protein_id=WP_000149710.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4561703 4562023 . - . ID=gene-CCO47_RS22205;Name=CCO47_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22205;old_locus_tag=CCO47_22205 NZ_CP075113.1 Protein Homology CDS 4561703 4562023 . - 0 ID=cds-WP_000161258.1;Parent=gene-CCO47_RS22205;Dbxref=GenBank:WP_000161258.1;Name=WP_000161258.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462993.1;locus_tag=CCO47_RS22205;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000161258.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4562038 4563117 . - . ID=gene-CCO47_RS22210;Name=CCO47_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22210;old_locus_tag=CCO47_22210 NZ_CP075113.1 Protein Homology CDS 4562038 4563117 . - 0 ID=cds-WP_000661597.1;Parent=gene-CCO47_RS22210;Dbxref=GenBank:WP_000661597.1;Name=WP_000661597.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462992.1;locus_tag=CCO47_RS22210;product=PTS fructose transporter subunit EIIC;protein_id=WP_000661597.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4563426 4565927 . + . ID=gene-CCO47_RS22215;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=CCO47_RS22215;old_locus_tag=CCO47_22215 NZ_CP075113.1 Protein Homology CDS 4563426 4565927 . + 0 ID=cds-WP_001128491.1;Parent=gene-CCO47_RS22215;Dbxref=GenBank:WP_001128491.1;Name=WP_001128491.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462991.1;locus_tag=CCO47_RS22215;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_001128491.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4565938 4566600 . + . ID=gene-CCO47_RS22220;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=CCO47_RS22220;old_locus_tag=CCO47_22220 NZ_CP075113.1 Protein Homology CDS 4565938 4566600 . + 0 ID=cds-WP_000424866.1;Parent=gene-CCO47_RS22220;Dbxref=GenBank:WP_000424866.1;Name=WP_000424866.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=CCO47_RS22220;product=fructose-6-phosphate aldolase;protein_id=WP_000424866.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4566612 4567715 . + . ID=gene-CCO47_RS22225;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=CCO47_RS22225;old_locus_tag=CCO47_22225 NZ_CP075113.1 Protein Homology CDS 4566612 4567715 . + 0 ID=cds-WP_000374023.1;Parent=gene-CCO47_RS22225;Dbxref=GenBank:WP_000374023.1;Name=WP_000374023.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=CCO47_RS22225;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_000374023.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4567974 4568597 . + . ID=gene-CCO47_RS22230;Name=CCO47_RS22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22230;old_locus_tag=CCO47_22230 NZ_CP075113.1 Protein Homology CDS 4567974 4568597 . + 0 ID=cds-WP_000666689.1;Parent=gene-CCO47_RS22230;Dbxref=GenBank:WP_000666689.1;Name=WP_000666689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462988.1;locus_tag=CCO47_RS22230;product=DUF1287 domain-containing protein;protein_id=WP_000666689.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4568655 4570835 . - . ID=gene-CCO47_RS22235;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=CCO47_RS22235;old_locus_tag=CCO47_22235 NZ_CP075113.1 Protein Homology CDS 4568655 4570835 . - 0 ID=cds-WP_000108105.1;Parent=gene-CCO47_RS22235;Dbxref=GenBank:WP_000108105.1;Name=WP_000108105.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462987.1;locus_tag=CCO47_RS22235;product=catalase/peroxidase HPI;protein_id=WP_000108105.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4571000 4571890 . - . ID=gene-CCO47_RS22240;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=CCO47_RS22240;old_locus_tag=CCO47_22240 NZ_CP075113.1 Protein Homology CDS 4571000 4571890 . - 0 ID=cds-WP_000007505.1;Parent=gene-CCO47_RS22240;Dbxref=GenBank:WP_000007505.1;Name=WP_000007505.1;Ontology_term=GO:0071265,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase [NAD(P)H] activity|0004489||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462986.1;locus_tag=CCO47_RS22240;product=methylenetetrahydrofolate reductase;protein_id=WP_000007505.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4572169 4573650 . + . ID=gene-CCO47_RS22245;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=CCO47_RS22245;old_locus_tag=CCO47_22245 NZ_CP075113.1 Protein Homology CDS 4572169 4573650 . + 0 ID=cds-WP_001090460.1;Parent=gene-CCO47_RS22245;Dbxref=GenBank:WP_001090460.1;Name=WP_001090460.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001090461.1;locus_tag=CCO47_RS22245;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_001090460.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4573595 4574701 . - . ID=gene-CCO47_RS22250;Name=CCO47_RS22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22250;old_locus_tag=CCO47_22250 NZ_CP075113.1 Protein Homology CDS 4573595 4574701 . - 0 ID=cds-WP_000976814.1;Parent=gene-CCO47_RS22250;Dbxref=GenBank:WP_000976814.1;Name=WP_000976814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976816.1;locus_tag=CCO47_RS22250;product=alanine racemase;protein_id=WP_000976814.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4574698 4575936 . - . ID=gene-CCO47_RS22255;Name=CCO47_RS22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22255;old_locus_tag=CCO47_22255 NZ_CP075113.1 Protein Homology CDS 4574698 4575936 . - 0 ID=cds-WP_000609326.1;Parent=gene-CCO47_RS22255;Dbxref=GenBank:WP_000609326.1;Name=WP_000609326.1;Ontology_term=GO:0019264,GO:0004372,GO:0030170;gbkey=CDS;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=glycine biosynthetic process from L-serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014341216.1;locus_tag=CCO47_RS22255;product=serine hydroxymethyltransferase;protein_id=WP_000609326.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4576201 4577757 . - . ID=gene-CCO47_RS22260;Name=CCO47_RS22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22260;old_locus_tag=CCO47_22260 NZ_CP075113.1 Protein Homology CDS 4576201 4577757 . - 0 ID=cds-WP_000865247.1;Parent=gene-CCO47_RS22260;Dbxref=GenBank:WP_000865247.1;Name=WP_000865247.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=CCO47_RS22260;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_000865247.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4577893 4579017 . + . ID=gene-CCO47_RS22265;Name=CCO47_RS22265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS22265;old_locus_tag=CCO47_22265;pseudo=true NZ_CP075113.1 Protein Homology CDS 4577893 4579017 . + 0 ID=cds-CCO47_RS22265;Parent=gene-CCO47_RS22265;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462984.1;locus_tag=CCO47_RS22265;product=cytoplasmic protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 4579252 4580250 . + . ID=gene-CCO47_RS22270;Name=CCO47_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22270;old_locus_tag=CCO47_22270 NZ_CP075113.1 Protein Homology CDS 4579252 4580250 . + 0 ID=cds-WP_000406824.1;Parent=gene-CCO47_RS22270;Dbxref=GenBank:WP_000406824.1;Name=WP_000406824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406820.1;locus_tag=CCO47_RS22270;product=MFS transporter;protein_id=WP_000406824.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4580253 4581110 . + . ID=gene-CCO47_RS22275;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=CCO47_RS22275;old_locus_tag=CCO47_22275 NZ_CP075113.1 Protein Homology CDS 4580253 4581110 . + 0 ID=cds-WP_000398246.1;Parent=gene-CCO47_RS22275;Dbxref=GenBank:WP_000398246.1;Name=WP_000398246.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462983.1;locus_tag=CCO47_RS22275;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000398246.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4581226 4583658 . - . ID=gene-CCO47_RS22280;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;locus_tag=CCO47_RS22280;old_locus_tag=CCO47_22280 NZ_CP075113.1 Protein Homology CDS 4581226 4583658 . - 0 ID=cds-WP_000110811.1;Parent=gene-CCO47_RS22280;Dbxref=GenBank:WP_000110811.1;Name=WP_000110811.1;gbkey=CDS;gene=metL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=CCO47_RS22280;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_000110811.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4583661 4584821 . - . ID=gene-CCO47_RS22285;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=CCO47_RS22285;old_locus_tag=CCO47_22285 NZ_CP075113.1 Protein Homology CDS 4583661 4584821 . - 0 ID=cds-WP_000197216.1;Parent=gene-CCO47_RS22285;Dbxref=GenBank:WP_000197216.1;Name=WP_000197216.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462981.1;locus_tag=CCO47_RS22285;product=cystathionine gamma-synthase;protein_id=WP_000197216.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4585086 4585403 . + . ID=gene-CCO47_RS22290;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=CCO47_RS22290;old_locus_tag=CCO47_22290 NZ_CP075113.1 Protein Homology CDS 4585086 4585403 . + 0 ID=cds-WP_000852811.1;Parent=gene-CCO47_RS22290;Dbxref=GenBank:WP_000852811.1;Name=WP_000852811.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=CCO47_RS22290;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852811.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4585860 4587650 . + . ID=gene-CCO47_RS22295;Name=CCO47_RS22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22295;old_locus_tag=CCO47_22295 NZ_CP075113.1 Protein Homology CDS 4585860 4587650 . + 0 ID=cds-WP_000899639.1;Parent=gene-CCO47_RS22295;Dbxref=GenBank:WP_000899639.1;Name=WP_000899639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=CCO47_RS22295;product=aryl-sulfate sulfotransferase;protein_id=WP_000899639.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4587851 4588513 . + . ID=gene-CCO47_RS22300;Name=CCO47_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22300;old_locus_tag=CCO47_22300 NZ_CP075113.1 Protein Homology CDS 4587851 4588513 . + 0 ID=cds-WP_000792803.1;Parent=gene-CCO47_RS22300;Dbxref=GenBank:WP_000792803.1;Name=WP_000792803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462978.1;locus_tag=CCO47_RS22300;product=TIGR02117 family protein;protein_id=WP_000792803.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4588558 4588770 . - . ID=gene-CCO47_RS22305;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=CCO47_RS22305;old_locus_tag=CCO47_22305 NZ_CP075113.1 Protein Homology CDS 4588558 4588770 . - 0 ID=cds-WP_000715284.1;Parent=gene-CCO47_RS22305;Dbxref=GenBank:WP_000715284.1;Name=WP_000715284.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462977.1;locus_tag=CCO47_RS22305;product=50S ribosomal protein L31;protein_id=WP_000715284.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4588974 4591172 . + . ID=gene-CCO47_RS22310;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=CCO47_RS22310;old_locus_tag=CCO47_22310 NZ_CP075113.1 Protein Homology CDS 4588974 4591172 . + 0 ID=cds-WP_000109386.1;Parent=gene-CCO47_RS22310;Dbxref=GenBank:WP_000109386.1;Name=WP_000109386.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=CCO47_RS22310;product=primosomal protein N';protein_id=WP_000109386.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4591327 4592352 . + . ID=gene-CCO47_RS22315;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=CCO47_RS22315;old_locus_tag=CCO47_22315 NZ_CP075113.1 Protein Homology CDS 4591327 4592352 . + 0 ID=cds-WP_000841337.1;Parent=gene-CCO47_RS22315;Dbxref=GenBank:WP_000841337.1;Name=WP_000841337.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462975.1;locus_tag=CCO47_RS22315;product=DNA-binding transcriptional regulator CytR;protein_id=WP_000841337.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4592446 4593420 . + . ID=gene-CCO47_RS22320;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=CCO47_RS22320;old_locus_tag=CCO47_22320 NZ_CP075113.1 Protein Homology CDS 4592446 4593420 . + 0 ID=cds-WP_000068816.1;Parent=gene-CCO47_RS22320;Dbxref=GenBank:WP_000068816.1;Name=WP_000068816.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462974.1;locus_tag=CCO47_RS22320;product=cell division protein FtsN;protein_id=WP_000068816.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4593512 4594042 . + . ID=gene-CCO47_RS22325;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=CCO47_RS22325;old_locus_tag=CCO47_22325 NZ_CP075113.1 Protein Homology CDS 4593512 4594042 . + 0 ID=cds-WP_000208240.1;Parent=gene-CCO47_RS22325;Dbxref=GenBank:WP_000208240.1;Name=WP_000208240.1;Ontology_term=GO:0030163,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462973.1;locus_tag=CCO47_RS22325;product=ATP-dependent protease subunit HslV;protein_id=WP_000208240.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4594052 4595383 . + . ID=gene-CCO47_RS22330;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=CCO47_RS22330;old_locus_tag=CCO47_22330 NZ_CP075113.1 Protein Homology CDS 4594052 4595383 . + 0 ID=cds-WP_001293360.1;Parent=gene-CCO47_RS22330;Dbxref=GenBank:WP_001293360.1;Name=WP_001293360.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=CCO47_RS22330;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_001293360.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4595450 4596379 . + . ID=gene-CCO47_RS22335;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=CCO47_RS22335;old_locus_tag=CCO47_22335 NZ_CP075113.1 Protein Homology CDS 4595450 4596379 . + 0 ID=cds-WP_000139637.1;Parent=gene-CCO47_RS22335;Dbxref=GenBank:WP_000139637.1;Name=WP_000139637.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462971.1;locus_tag=CCO47_RS22335;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_000139637.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4596472 4596957 . + . ID=gene-CCO47_RS22340;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=CCO47_RS22340;old_locus_tag=CCO47_22340 NZ_CP075113.1 Protein Homology CDS 4596472 4596957 . + 0 ID=cds-WP_000872918.1;Parent=gene-CCO47_RS22340;Dbxref=GenBank:WP_000872918.1;Name=WP_000872918.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=CCO47_RS22340;product=ribonuclease E activity regulator RraA;protein_id=WP_000872918.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4597179 4597418 . - . ID=gene-CCO47_RS22345;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=CCO47_RS22345;old_locus_tag=CCO47_22345 NZ_CP075113.1 Protein Homology CDS 4597179 4597418 . - 0 ID=cds-WP_000051370.1;Parent=gene-CCO47_RS22345;Dbxref=GenBank:WP_000051370.1;Name=WP_000051370.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229475.1;locus_tag=CCO47_RS22345;product=septal ring assembly protein ZapB;protein_id=WP_000051370.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4597817 4598662 . + . ID=gene-CCO47_RS22350;Name=CCO47_RS22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22350;old_locus_tag=CCO47_22350 NZ_CP075113.1 Protein Homology CDS 4597817 4598662 . + 0 ID=cds-WP_000084285.1;Parent=gene-CCO47_RS22350;Dbxref=GenBank:WP_000084285.1;Name=WP_000084285.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462968.1;locus_tag=CCO47_RS22350;product=MIP/aquaporin family protein;protein_id=WP_000084285.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4598683 4600191 . + . ID=gene-CCO47_RS22355;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=CCO47_RS22355;old_locus_tag=CCO47_22355 NZ_CP075113.1 Protein Homology CDS 4598683 4600191 . + 0 ID=cds-WP_000136809.1;Parent=gene-CCO47_RS22355;Dbxref=GenBank:WP_000136809.1;Name=WP_000136809.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462967.1;locus_tag=CCO47_RS22355;product=glycerol kinase GlpK;protein_id=WP_000136809.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4600303 4601313 . + . ID=gene-CCO47_RS22360;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=CCO47_RS22360;old_locus_tag=CCO47_22360 NZ_CP075113.1 Protein Homology CDS 4600303 4601313 . + 0 ID=cds-WP_001250616.1;Parent=gene-CCO47_RS22360;Dbxref=GenBank:WP_001250616.1;Name=WP_001250616.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=CCO47_RS22360;product=class II fructose-bisphosphatase;protein_id=WP_001250616.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4601410 4602156 . + . ID=gene-CCO47_RS22365;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=CCO47_RS22365;old_locus_tag=CCO47_22365 NZ_CP075113.1 Protein Homology CDS 4601410 4602156 . + 0 ID=cds-WP_000796303.1;Parent=gene-CCO47_RS22365;Dbxref=GenBank:WP_000796303.1;Name=WP_000796303.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462965.1;locus_tag=CCO47_RS22365;product=ferredoxin--NADP(+) reductase;protein_id=WP_000796303.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4602262 4602690 . - . ID=gene-CCO47_RS22370;Name=CCO47_RS22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22370;old_locus_tag=CCO47_22370 NZ_CP075113.1 Protein Homology CDS 4602262 4602690 . - 0 ID=cds-WP_000155231.1;Parent=gene-CCO47_RS22370;Dbxref=GenBank:WP_000155231.1;Name=WP_000155231.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006724708.1;locus_tag=CCO47_RS22370;product=DUF805 domain-containing protein;protein_id=WP_000155231.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4602791 4603387 . + . ID=gene-CCO47_RS22375;Name=CCO47_RS22375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22375;old_locus_tag=CCO47_22375 NZ_CP075113.1 Protein Homology CDS 4602791 4603387 . + 0 ID=cds-WP_000802241.1;Parent=gene-CCO47_RS22375;Dbxref=GenBank:WP_000802241.1;Name=WP_000802241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462963.1;locus_tag=CCO47_RS22375;product=YiiQ family protein;protein_id=WP_000802241.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4603500 4604267 . + . ID=gene-CCO47_RS22380;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=CCO47_RS22380;old_locus_tag=CCO47_22380 NZ_CP075113.1 Protein Homology CDS 4603500 4604267 . + 0 ID=cds-WP_001216335.1;Parent=gene-CCO47_RS22380;Dbxref=GenBank:WP_001216335.1;Name=WP_001216335.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462962.1;locus_tag=CCO47_RS22380;product=triose-phosphate isomerase;protein_id=WP_001216335.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4604359 4605123 . - . ID=gene-CCO47_RS22385;Name=CCO47_RS22385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22385;old_locus_tag=CCO47_22385 NZ_CP075113.1 Protein Homology CDS 4604359 4605123 . - 0 ID=cds-WP_001088050.1;Parent=gene-CCO47_RS22385;Dbxref=GenBank:WP_001088050.1;Name=WP_001088050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462961.1;locus_tag=CCO47_RS22385;product=beta/alpha barrel domain-containing protein;protein_id=WP_001088050.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4605133 4605423 . - . ID=gene-CCO47_RS22390;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=CCO47_RS22390;old_locus_tag=CCO47_22390 NZ_CP075113.1 Protein Homology CDS 4605133 4605423 . - 0 ID=cds-WP_001543603.1;Parent=gene-CCO47_RS22390;Dbxref=GenBank:WP_001543603.1;Name=WP_001543603.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=CCO47_RS22390;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_001543603.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4605506 4606381 . - . ID=gene-CCO47_RS22395;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=CCO47_RS22395;old_locus_tag=CCO47_22395 NZ_CP075113.1 Protein Homology CDS 4605506 4606381 . - 0 ID=cds-WP_000774146.1;Parent=gene-CCO47_RS22395;Dbxref=GenBank:WP_000774146.1;Name=WP_000774146.1;gbkey=CDS;gene=lsrF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774144.1;locus_tag=CCO47_RS22395;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase LsrF;protein_id=WP_000774146.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4606410 4607432 . - . ID=gene-CCO47_RS22400;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=CCO47_RS22400;old_locus_tag=CCO47_22400 NZ_CP075113.1 Protein Homology CDS 4606410 4607432 . - 0 ID=cds-WP_000090743.1;Parent=gene-CCO47_RS22400;Dbxref=GenBank:WP_000090743.1;Name=WP_000090743.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462958.1;locus_tag=CCO47_RS22400;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_000090743.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4607461 4608462 . - . ID=gene-CCO47_RS22405;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=CCO47_RS22405;old_locus_tag=CCO47_22405 NZ_CP075113.1 Protein Homology CDS 4607461 4608462 . - 0 ID=cds-WP_000981831.1;Parent=gene-CCO47_RS22405;Dbxref=GenBank:WP_000981831.1;Name=WP_000981831.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462957.1;locus_tag=CCO47_RS22405;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_000981831.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4608459 4609502 . - . ID=gene-CCO47_RS22410;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=CCO47_RS22410;old_locus_tag=CCO47_22410 NZ_CP075113.1 Protein Homology CDS 4608459 4609502 . - 0 ID=cds-WP_000911137.1;Parent=gene-CCO47_RS22410;Dbxref=GenBank:WP_000911137.1;Name=WP_000911137.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462956.1;locus_tag=CCO47_RS22410;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_000911137.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4609496 4611031 . - . ID=gene-CCO47_RS22415;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=CCO47_RS22415;old_locus_tag=CCO47_22415 NZ_CP075113.1 Protein Homology CDS 4609496 4611031 . - 0 ID=cds-WP_001167248.1;Parent=gene-CCO47_RS22415;Dbxref=GenBank:WP_001167248.1;Name=WP_001167248.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462955.1;locus_tag=CCO47_RS22415;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_001167248.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4611288 4612247 . + . ID=gene-CCO47_RS22420;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=CCO47_RS22420;old_locus_tag=CCO47_22420 NZ_CP075113.1 Protein Homology CDS 4611288 4612247 . + 0 ID=cds-WP_001283049.1;Parent=gene-CCO47_RS22420;Dbxref=GenBank:WP_001283049.1;Name=WP_001283049.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462954.1;locus_tag=CCO47_RS22420;product=transcriptional regulator LsrR;protein_id=WP_001283049.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4612334 4613926 . + . ID=gene-CCO47_RS22425;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=CCO47_RS22425;old_locus_tag=CCO47_22425 NZ_CP075113.1 Protein Homology CDS 4612334 4613926 . + 0 ID=cds-WP_000113085.1;Parent=gene-CCO47_RS22425;Dbxref=GenBank:WP_000113085.1;Name=WP_000113085.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462953.1;locus_tag=CCO47_RS22425;product=autoinducer-2 kinase;protein_id=WP_000113085.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4613940 4614290 . + . ID=gene-CCO47_RS22430;Name=CCO47_RS22430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22430;old_locus_tag=CCO47_22430 NZ_CP075113.1 Protein Homology CDS 4613940 4614290 . + 0 ID=cds-WP_001173083.1;Parent=gene-CCO47_RS22430;Dbxref=GenBank:WP_001173083.1;Name=WP_001173083.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742380.1;locus_tag=CCO47_RS22430;product=cupin domain-containing protein;protein_id=WP_001173083.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4614380 4614520 . - . ID=gene-CCO47_RS22435;Name=CCO47_RS22435;end_range=4614520,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS22435;old_locus_tag=CCO47_22435;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 4614380 4614520 . - 0 ID=cds-CCO47_RS22435;Parent=gene-CCO47_RS22435;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008654,GO:0008715,GO:0016020;end_range=4614520,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=CCO47_RS22435;partial=true;product=CDP-diacylglycerol diphosphatase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4614572 4614697 . - . ID=gene-CCO47_RS22440;Name=CCO47_RS22440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS22440;old_locus_tag=CCO47_22440;partial=true;pseudo=true;start_range=.,4614572 NZ_CP075113.1 Protein Homology CDS 4614572 4614697 . - 0 ID=cds-CCO47_RS22440;Parent=gene-CCO47_RS22440;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229472.1;locus_tag=CCO47_RS22440;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4614572;transl_table=11 NZ_CP075113.1 RefSeq gene 4614795 4615517 . - . ID=gene-CCO47_RS22445;Name=CCO47_RS22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22445;old_locus_tag=CCO47_22445 NZ_CP075113.1 Protein Homology CDS 4614795 4615517 . - 0 ID=cds-WP_001535809.1;Parent=gene-CCO47_RS22445;Dbxref=GenBank:WP_001535809.1;Name=WP_001535809.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462949.1;locus_tag=CCO47_RS22445;product=GntR family transcriptional regulator;protein_id=WP_001535809.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4615580 4616620 . - . ID=gene-CCO47_RS22450;Name=CCO47_RS22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22450;old_locus_tag=CCO47_22450 NZ_CP075113.1 Protein Homology CDS 4615580 4616620 . - 0 ID=cds-WP_000557882.1;Parent=gene-CCO47_RS22450;Dbxref=GenBank:WP_000557882.1;Name=WP_000557882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462948.1;locus_tag=CCO47_RS22450;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000557882.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4616630 4617589 . - . ID=gene-CCO47_RS22455;Name=CCO47_RS22455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22455;old_locus_tag=CCO47_22455 NZ_CP075113.1 Protein Homology CDS 4616630 4617589 . - 0 ID=cds-WP_000646506.1;Parent=gene-CCO47_RS22455;Dbxref=GenBank:WP_000646506.1;Name=WP_000646506.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462947.1;locus_tag=CCO47_RS22455;product=aminoimidazole riboside kinase;protein_id=WP_000646506.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4617600 4618934 . - . ID=gene-CCO47_RS22460;Name=CCO47_RS22460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22460;old_locus_tag=CCO47_22460 NZ_CP075113.1 Protein Homology CDS 4617600 4618934 . - 0 ID=cds-WP_000777316.1;Parent=gene-CCO47_RS22460;Dbxref=GenBank:WP_000777316.1;Name=WP_000777316.1;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=CCO47_RS22460;product=MFS transporter;protein_id=WP_000777316.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4619198 4619953 . - . ID=gene-CCO47_RS22465;Name=CCO47_RS22465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22465;old_locus_tag=CCO47_22465 NZ_CP075113.1 Protein Homology CDS 4619198 4619953 . - 0 ID=cds-WP_000750762.1;Parent=gene-CCO47_RS22465;Dbxref=GenBank:WP_000750762.1;Name=WP_000750762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=CCO47_RS22465;product=CDP-diacylglycerol diphosphatase;protein_id=WP_000750762.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4620054 4621043 . - . ID=gene-CCO47_RS22470;Name=CCO47_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22470;old_locus_tag=CCO47_22470 NZ_CP075113.1 Protein Homology CDS 4620054 4621043 . - 0 ID=cds-WP_000758718.1;Parent=gene-CCO47_RS22470;Dbxref=GenBank:WP_000758718.1;Name=WP_000758718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=CCO47_RS22470;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_000758718.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4621247 4622209 . - . ID=gene-CCO47_RS22475;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=CCO47_RS22475;old_locus_tag=CCO47_22475 NZ_CP075113.1 Protein Homology CDS 4621247 4622209 . - 0 ID=cds-WP_000591793.1;Parent=gene-CCO47_RS22475;Dbxref=GenBank:WP_000591793.1;Name=WP_000591793.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=CCO47_RS22475;product=6-phosphofructokinase;protein_id=WP_000591793.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4622394 4623296 . - . ID=gene-CCO47_RS22480;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=CCO47_RS22480;old_locus_tag=CCO47_22480 NZ_CP075113.1 Protein Homology CDS 4622394 4623296 . - 0 ID=cds-WP_001077320.1;Parent=gene-CCO47_RS22480;Dbxref=GenBank:WP_001077320.1;Name=WP_001077320.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462942.1;locus_tag=CCO47_RS22480;product=CDF family cation-efflux transporter FieF;protein_id=WP_001077320.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4623444 4623944 . - . ID=gene-CCO47_RS22485;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=CCO47_RS22485;old_locus_tag=CCO47_22485 NZ_CP075113.1 Protein Homology CDS 4623444 4623944 . - 0 ID=cds-WP_001233463.1;Parent=gene-CCO47_RS22485;Dbxref=GenBank:WP_001233463.1;Name=WP_001233463.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462941.1;locus_tag=CCO47_RS22485;product=cell-envelope stress modulator CpxP;protein_id=WP_001233463.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4624095 4624793 . + . ID=gene-CCO47_RS22490;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=CCO47_RS22490;old_locus_tag=CCO47_22490 NZ_CP075113.1 Protein Homology CDS 4624095 4624793 . + 0 ID=cds-WP_001033731.1;Parent=gene-CCO47_RS22490;Dbxref=GenBank:WP_001033731.1;Name=WP_001033731.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=CCO47_RS22490;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033731.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4624790 4626163 . + . ID=gene-CCO47_RS22495;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=CCO47_RS22495;old_locus_tag=CCO47_22495 NZ_CP075113.1 Protein Homology CDS 4624790 4626163 . + 0 ID=cds-WP_000580405.1;Parent=gene-CCO47_RS22495;Dbxref=GenBank:WP_000580405.1;Name=WP_000580405.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=CCO47_RS22495;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_000580405.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4626214 4626609 . - . ID=gene-CCO47_RS22500;Name=CCO47_RS22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22500;old_locus_tag=CCO47_22500 NZ_CP075113.1 Protein Homology CDS 4626214 4626609 . - 0 ID=cds-WP_000133443.1;Parent=gene-CCO47_RS22500;Dbxref=GenBank:WP_000133443.1;Name=WP_000133443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462938.1;locus_tag=CCO47_RS22500;product=nuclear transport factor 2 family protein;protein_id=WP_000133443.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4626621 4627310 . - . ID=gene-CCO47_RS22505;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=CCO47_RS22505;old_locus_tag=CCO47_22505 NZ_CP075113.1 Protein Homology CDS 4626621 4627310 . - 0 ID=cds-WP_000559229.1;Parent=gene-CCO47_RS22505;Dbxref=GenBank:WP_000559229.1;Name=WP_000559229.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559227.1;locus_tag=CCO47_RS22505;product=6-hydroxyaminopurine reductase;protein_id=WP_000559229.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4627380 4628000 . - . ID=gene-CCO47_RS22510;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=CCO47_RS22510;old_locus_tag=CCO47_22510 NZ_CP075113.1 Protein Homology CDS 4627380 4628000 . - 0 ID=cds-WP_000122632.1;Parent=gene-CCO47_RS22510;Dbxref=GenBank:WP_000122632.1;Name=WP_000122632.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=CCO47_RS22510;product=superoxide dismutase [Mn];protein_id=WP_000122632.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4628329 4629312 . + . ID=gene-CCO47_RS22515;Name=CCO47_RS22515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22515;old_locus_tag=CCO47_22515 NZ_CP075113.1 Protein Homology CDS 4628329 4629312 . + 0 ID=cds-WP_000812820.1;Parent=gene-CCO47_RS22515;Dbxref=GenBank:WP_000812820.1;Name=WP_000812820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=CCO47_RS22515;product=TRAP transporter substrate-binding protein;protein_id=WP_000812820.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4629331 4629846 . + . ID=gene-CCO47_RS22520;Name=CCO47_RS22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22520;old_locus_tag=CCO47_22520 NZ_CP075113.1 Protein Homology CDS 4629331 4629846 . + 0 ID=cds-WP_001091412.1;Parent=gene-CCO47_RS22520;Dbxref=GenBank:WP_001091412.1;Name=WP_001091412.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462934.1;locus_tag=CCO47_RS22520;product=TRAP transporter small permease;protein_id=WP_001091412.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4629839 4631146 . + . ID=gene-CCO47_RS22525;Name=CCO47_RS22525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22525;old_locus_tag=CCO47_22525 NZ_CP075113.1 Protein Homology CDS 4629839 4631146 . + 0 ID=cds-WP_000566800.1;Parent=gene-CCO47_RS22525;Dbxref=GenBank:WP_000566800.1;Name=WP_000566800.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462933.1;locus_tag=CCO47_RS22525;product=TRAP transporter large permease;protein_id=WP_000566800.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4631304 4631987 . - . ID=gene-CCO47_RS22530;Name=CCO47_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22530;old_locus_tag=CCO47_22530 NZ_CP075113.1 Protein Homology CDS 4631304 4631987 . - 0 ID=cds-WP_000378721.1;Parent=gene-CCO47_RS22530;Dbxref=GenBank:WP_000378721.1;Name=WP_000378721.1;Ontology_term=GO:0015772,GO:0034219,GO:0015288;gbkey=CDS;go_function=porin activity|0015288||IEA;go_process=oligosaccharide transport|0015772||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462932.3;locus_tag=CCO47_RS22530;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_000378721.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4632606 4633640 . + . ID=gene-CCO47_RS22535;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=CCO47_RS22535;old_locus_tag=CCO47_22535 NZ_CP075113.1 Protein Homology CDS 4632606 4633640 . + 0 ID=cds-WP_000063533.1;Parent=gene-CCO47_RS22535;Dbxref=GenBank:WP_000063533.1;Name=WP_000063533.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=CCO47_RS22535;product=L-rhamnose/proton symporter RhaT;protein_id=WP_000063533.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4633637 4634485 . - . ID=gene-CCO47_RS22540;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=CCO47_RS22540;old_locus_tag=CCO47_22540 NZ_CP075113.1 Protein Homology CDS 4633637 4634485 . - 0 ID=cds-WP_000013293.1;Parent=gene-CCO47_RS22540;Dbxref=GenBank:WP_000013293.1;Name=WP_000013293.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462930.1;locus_tag=CCO47_RS22540;product=HTH-type transcriptional activator RhaR;protein_id=WP_000013293.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4634638 4635474 . - . ID=gene-CCO47_RS22545;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=CCO47_RS22545;old_locus_tag=CCO47_22545 NZ_CP075113.1 Protein Homology CDS 4634638 4635474 . - 0 ID=cds-WP_000217118.1;Parent=gene-CCO47_RS22545;Dbxref=GenBank:WP_000217118.1;Name=WP_000217118.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462929.1;locus_tag=CCO47_RS22545;product=HTH-type transcriptional activator RhaS;protein_id=WP_000217118.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4635762 4637231 . + . ID=gene-CCO47_RS22550;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=CCO47_RS22550;old_locus_tag=CCO47_22550 NZ_CP075113.1 Protein Homology CDS 4635762 4637231 . + 0 ID=cds-WP_000143977.1;Parent=gene-CCO47_RS22550;Dbxref=GenBank:WP_000143977.1;Name=WP_000143977.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=CCO47_RS22550;product=rhamnulokinase;protein_id=WP_000143977.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4637228 4638487 . + . ID=gene-CCO47_RS22555;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=CCO47_RS22555;old_locus_tag=CCO47_22555 NZ_CP075113.1 Protein Homology CDS 4637228 4638487 . + 0 ID=cds-WP_000211465.1;Parent=gene-CCO47_RS22555;Dbxref=GenBank:WP_000211465.1;Name=WP_000211465.1;Ontology_term=GO:0019318,GO:0008740,GO:0030145;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=hexose metabolic process|0019318||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954851.1;locus_tag=CCO47_RS22555;product=L-rhamnose isomerase;protein_id=WP_000211465.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4638631 4639458 . + . ID=gene-CCO47_RS22560;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=CCO47_RS22560;old_locus_tag=CCO47_22560 NZ_CP075113.1 Protein Homology CDS 4638631 4639458 . + 0 ID=cds-WP_001179690.1;Parent=gene-CCO47_RS22560;Dbxref=GenBank:WP_001179690.1;Name=WP_001179690.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=CCO47_RS22560;product=rhamnulose-1-phosphate aldolase;protein_id=WP_001179690.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4639585 4640733 . + . ID=gene-CCO47_RS22565;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=CCO47_RS22565;old_locus_tag=CCO47_22565 NZ_CP075113.1 Protein Homology CDS 4639585 4640733 . + 0 ID=cds-WP_000009254.1;Parent=gene-CCO47_RS22565;Dbxref=GenBank:WP_000009254.1;Name=WP_000009254.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462925.1;locus_tag=CCO47_RS22565;product=lactaldehyde reductase;protein_id=WP_000009254.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4640730 4641044 . + . ID=gene-CCO47_RS22570;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=CCO47_RS22570;old_locus_tag=CCO47_22570 NZ_CP075113.1 Protein Homology CDS 4640730 4641044 . + 0 ID=cds-WP_000619475.1;Parent=gene-CCO47_RS22570;Dbxref=GenBank:WP_000619475.1;Name=WP_000619475.1;Ontology_term=GO:0019318,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=hexose metabolic process|0019318||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=CCO47_RS22570;product=L-rhamnose mutarotase;protein_id=WP_000619475.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4641133 4641681 . - . ID=gene-CCO47_RS22575;Name=CCO47_RS22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22575;old_locus_tag=CCO47_22575 NZ_CP075113.1 Protein Homology CDS 4641133 4641681 . - 0 ID=cds-WP_001517951.1;Parent=gene-CCO47_RS22575;Dbxref=GenBank:WP_001517951.1;Name=WP_001517951.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=CCO47_RS22575;product=helix-turn-helix domain-containing protein;protein_id=WP_001517951.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4641782 4642441 . + . ID=gene-CCO47_RS22580;Name=CCO47_RS22580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22580;old_locus_tag=CCO47_22580 NZ_CP075113.1 Protein Homology CDS 4641782 4642441 . + 0 ID=cds-WP_000683594.1;Parent=gene-CCO47_RS22580;Dbxref=GenBank:WP_000683594.1;Name=WP_000683594.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462922.1;locus_tag=CCO47_RS22580;product=AzlC family ABC transporter permease;protein_id=WP_000683594.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4642441 4642764 . + . ID=gene-CCO47_RS22585;Name=CCO47_RS22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22585;old_locus_tag=CCO47_22585 NZ_CP075113.1 Protein Homology CDS 4642441 4642764 . + 0 ID=cds-WP_000527677.1;Parent=gene-CCO47_RS22585;Dbxref=GenBank:WP_000527677.1;Name=WP_000527677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=CCO47_RS22585;product=AzlD domain-containing protein;protein_id=WP_000527677.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4643120 4644220 . - . ID=gene-CCO47_RS22590;Name=CCO47_RS22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22590;old_locus_tag=CCO47_22590 NZ_CP075113.1 Protein Homology CDS 4643120 4644220 . - 0 ID=cds-WP_000828038.1;Parent=gene-CCO47_RS22590;Dbxref=GenBank:WP_000828038.1;Name=WP_000828038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828052.1;locus_tag=CCO47_RS22590;product=YiiG family protein;protein_id=WP_000828038.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4644403 4645434 . + . ID=gene-CCO47_RS22595;Name=CCO47_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22595;old_locus_tag=CCO47_22595 NZ_CP075113.1 Protein Homology CDS 4644403 4645434 . + 0 ID=cds-WP_000710971.1;Parent=gene-CCO47_RS22595;Dbxref=GenBank:WP_000710971.1;Name=WP_000710971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462919.1;locus_tag=CCO47_RS22595;product=YiiG family protein;protein_id=WP_000710971.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4645702 4646538 . - . ID=gene-CCO47_RS22600;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=CCO47_RS22600;old_locus_tag=CCO47_22600 NZ_CP075113.1 Protein Homology CDS 4645702 4646538 . - 0 ID=cds-WP_001059743.1;Parent=gene-CCO47_RS22600;Dbxref=GenBank:WP_001059743.1;Name=WP_001059743.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=CCO47_RS22600;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_001059743.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4646733 4649783 . + . ID=gene-CCO47_RS22605;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=CCO47_RS22605;old_locus_tag=CCO47_22605 NZ_CP075113.1 Protein Homology CDS 4646733 4649783 . + 0 ID=cds-WP_001575215.1;Parent=gene-CCO47_RS22605;Dbxref=GenBank:WP_001575215.1;Name=WP_001575215.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=CCO47_RS22605;product=formate dehydrogenase-N subunit alpha;protein_id=WP_001575215.1;transl_except=(pos:4647318..4647320%2Caa:Sec);transl_table=11 NZ_CP075113.1 RefSeq gene 4649796 4650698 . + . ID=gene-CCO47_RS22610;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=CCO47_RS22610;old_locus_tag=CCO47_22610 NZ_CP075113.1 Protein Homology CDS 4649796 4650698 . + 0 ID=cds-WP_000331367.1;Parent=gene-CCO47_RS22610;Dbxref=GenBank:WP_000331367.1;Name=WP_000331367.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=CCO47_RS22610;product=formate dehydrogenase subunit beta;protein_id=WP_000331367.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4650695 4651330 . + . ID=gene-CCO47_RS22615;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=CCO47_RS22615;old_locus_tag=CCO47_22615 NZ_CP075113.1 Protein Homology CDS 4650695 4651330 . + 0 ID=cds-WP_000829025.1;Parent=gene-CCO47_RS22615;Dbxref=GenBank:WP_000829025.1;Name=WP_000829025.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462915.1;locus_tag=CCO47_RS22615;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829025.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4651327 4652256 . + . ID=gene-CCO47_RS22620;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=CCO47_RS22620;old_locus_tag=CCO47_22620 NZ_CP075113.1 Protein Homology CDS 4651327 4652256 . + 0 ID=cds-WP_000027737.1;Parent=gene-CCO47_RS22620;Dbxref=GenBank:WP_000027737.1;Name=WP_000027737.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=CCO47_RS22620;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_000027737.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4652303 4652593 . - . ID=gene-CCO47_RS22625;Name=CCO47_RS22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22625;old_locus_tag=CCO47_22625 NZ_CP075113.1 Protein Homology CDS 4652303 4652593 . - 0 ID=cds-WP_000362050.1;Parent=gene-CCO47_RS22625;Dbxref=GenBank:WP_000362050.1;Name=WP_000362050.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264433.1;locus_tag=CCO47_RS22625;product=helix-turn-helix domain-containing protein;protein_id=WP_000362050.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4652594 4652905 . - . ID=gene-CCO47_RS22630;Name=CCO47_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22630;old_locus_tag=CCO47_22630 NZ_CP075113.1 Protein Homology CDS 4652594 4652905 . - 0 ID=cds-WP_001159635.1;Parent=gene-CCO47_RS22630;Dbxref=GenBank:WP_001159635.1;Name=WP_001159635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001159636.1;locus_tag=CCO47_RS22630;product=cytotoxic translational repressor of toxin-antitoxin stability system;protein_id=WP_001159635.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4653123 4654052 . + . ID=gene-CCO47_RS22635;Name=CCO47_RS22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22635;old_locus_tag=CCO47_22635 NZ_CP075113.1 Protein Homology CDS 4653123 4654052 . + 0 ID=cds-WP_001127708.1;Parent=gene-CCO47_RS22635;Dbxref=GenBank:WP_001127708.1;Name=WP_001127708.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462912.1;locus_tag=CCO47_RS22635;product=alpha/beta hydrolase;protein_id=WP_001127708.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4654138 4654449 . + . ID=gene-CCO47_RS22640;Name=CCO47_RS22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22640;old_locus_tag=CCO47_22640 NZ_CP075113.1 Protein Homology CDS 4654138 4654449 . + 0 ID=cds-WP_000558169.1;Parent=gene-CCO47_RS22640;Dbxref=GenBank:WP_000558169.1;Name=WP_000558169.1;Ontology_term=GO:0003723,GO:0004519,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA binding|0003723||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462911.1;locus_tag=CCO47_RS22640;product=type II toxin-antitoxin system HigB family toxin;protein_id=WP_000558169.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4654446 4654892 . + . ID=gene-CCO47_RS22645;Name=CCO47_RS22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22645;old_locus_tag=CCO47_22645 NZ_CP075113.1 Protein Homology CDS 4654446 4654892 . + 0 ID=cds-WP_001259012.1;Parent=gene-CCO47_RS22645;Dbxref=GenBank:WP_001259012.1;Name=WP_001259012.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462910.3;locus_tag=CCO47_RS22645;product=helix-turn-helix domain-containing protein;protein_id=WP_001259012.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4654907 4655848 . - . ID=gene-CCO47_RS22650;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=CCO47_RS22650;old_locus_tag=CCO47_22650 NZ_CP075113.1 Protein Homology CDS 4654907 4655848 . - 0 ID=cds-WP_024132413.1;Parent=gene-CCO47_RS22650;Dbxref=GenBank:WP_024132413.1;Name=WP_024132413.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=CCO47_RS22650;product=fatty acid biosynthesis protein FabY;protein_id=WP_024132413.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4655893 4656330 . - . ID=gene-CCO47_RS22655;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=CCO47_RS22655;old_locus_tag=CCO47_22655 NZ_CP075113.1 Protein Homology CDS 4655893 4656330 . - 0 ID=cds-WP_000560969.1;Parent=gene-CCO47_RS22655;Dbxref=GenBank:WP_000560969.1;Name=WP_000560969.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=CCO47_RS22655;product=D-aminoacyl-tRNA deacylase;protein_id=WP_000560969.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4656327 4657199 . - . ID=gene-CCO47_RS22660;Name=CCO47_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22660;old_locus_tag=CCO47_22660 NZ_CP075113.1 Protein Homology CDS 4656327 4657199 . - 0 ID=cds-WP_000921423.1;Parent=gene-CCO47_RS22660;Dbxref=GenBank:WP_000921423.1;Name=WP_000921423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462907.1;locus_tag=CCO47_RS22660;product=virulence factor BrkB family protein;protein_id=WP_000921423.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4657193 4657792 . - . ID=gene-CCO47_RS22665;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=CCO47_RS22665;old_locus_tag=CCO47_22665 NZ_CP075113.1 Protein Homology CDS 4657193 4657792 . - 0 ID=cds-WP_000965695.1;Parent=gene-CCO47_RS22665;Dbxref=GenBank:WP_000965695.1;Name=WP_000965695.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462906.1;locus_tag=CCO47_RS22665;product=glucose-1-phosphatase;protein_id=WP_000965695.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4657983 4658786 . - . ID=gene-CCO47_RS22670;Name=CCO47_RS22670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22670;old_locus_tag=CCO47_22670 NZ_CP075113.1 Protein Homology CDS 4657983 4658786 . - 0 ID=cds-WP_000059693.1;Parent=gene-CCO47_RS22670;Dbxref=GenBank:WP_000059693.1;Name=WP_000059693.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462905.1;locus_tag=CCO47_RS22670;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000059693.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4658820 4659716 . - . ID=gene-CCO47_RS22675;Name=CCO47_RS22675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22675;old_locus_tag=CCO47_22675 NZ_CP075113.1 Protein Homology CDS 4658820 4659716 . - 0 ID=cds-WP_001575213.1;Parent=gene-CCO47_RS22675;Dbxref=GenBank:WP_001575213.1;Name=WP_001575213.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462904.3;locus_tag=CCO47_RS22675;product=sugar kinase;protein_id=WP_001575213.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4659881 4660777 . + . ID=gene-CCO47_RS22680;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=CCO47_RS22680;old_locus_tag=CCO47_22680 NZ_CP075113.1 Protein Homology CDS 4659881 4660777 . + 0 ID=cds-WP_000268248.1;Parent=gene-CCO47_RS22680;Dbxref=GenBank:WP_000268248.1;Name=WP_000268248.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462903.1;locus_tag=CCO47_RS22680;product=sulfolactaldehyde 3-reductase;protein_id=WP_000268248.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4660800 4661678 . + . ID=gene-CCO47_RS22685;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=CCO47_RS22685;old_locus_tag=CCO47_22685 NZ_CP075113.1 Protein Homology CDS 4660800 4661678 . + 0 ID=cds-WP_001067413.1;Parent=gene-CCO47_RS22685;Dbxref=GenBank:WP_001067413.1;Name=WP_001067413.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462902.1;locus_tag=CCO47_RS22685;product=sulfofructosephosphate aldolase;protein_id=WP_001067413.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4661694 4662935 . + . ID=gene-CCO47_RS22690;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=CCO47_RS22690;old_locus_tag=CCO47_22690 NZ_CP075113.1 Protein Homology CDS 4661694 4662935 . + 0 ID=cds-WP_000870945.1;Parent=gene-CCO47_RS22690;Dbxref=GenBank:WP_000870945.1;Name=WP_000870945.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462901.1;locus_tag=CCO47_RS22690;product=sulfoquinovose isomerase;protein_id=WP_000870945.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4662939 4663796 . + . ID=gene-CCO47_RS22695;Name=CCO47_RS22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22695;old_locus_tag=CCO47_22695 NZ_CP075113.1 Protein Homology CDS 4662939 4663796 . + 0 ID=cds-WP_001675468.1;Parent=gene-CCO47_RS22695;Dbxref=GenBank:WP_001675468.1;Name=WP_001675468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462900.3;locus_tag=CCO47_RS22695;product=aldose-1-epimerase;protein_id=WP_001675468.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4663840 4665876 . + . ID=gene-CCO47_RS22700;Name=CCO47_RS22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22700;old_locus_tag=CCO47_22700 NZ_CP075113.1 Protein Homology CDS 4663840 4665876 . + 0 ID=cds-WP_001087038.1;Parent=gene-CCO47_RS22700;Dbxref=GenBank:WP_001087038.1;Name=WP_001087038.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462899.1;locus_tag=CCO47_RS22700;product=alpha-glucosidase;protein_id=WP_001087038.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4665922 4667304 . + . ID=gene-CCO47_RS22705;Name=CCO47_RS22705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22705;old_locus_tag=CCO47_22705 NZ_CP075113.1 Protein Homology CDS 4665922 4667304 . + 0 ID=cds-WP_000084251.1;Parent=gene-CCO47_RS22705;Dbxref=GenBank:WP_000084251.1;Name=WP_000084251.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462898.1;locus_tag=CCO47_RS22705;product=MFS transporter;protein_id=WP_000084251.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4667350 4668771 . + . ID=gene-CCO47_RS22710;Name=CCO47_RS22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22710;old_locus_tag=CCO47_22710 NZ_CP075113.1 Protein Homology CDS 4667350 4668771 . + 0 ID=cds-WP_000064900.1;Parent=gene-CCO47_RS22710;Dbxref=GenBank:WP_000064900.1;Name=WP_000064900.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462897.1;locus_tag=CCO47_RS22710;product=MFS transporter;protein_id=WP_000064900.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4668839 4669531 . + . ID=gene-CCO47_RS22715;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=CCO47_RS22715;old_locus_tag=CCO47_22715 NZ_CP075113.1 Protein Homology CDS 4668839 4669531 . + 0 ID=cds-WP_000838828.1;Parent=gene-CCO47_RS22715;Dbxref=GenBank:WP_000838828.1;Name=WP_000838828.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462896.1;locus_tag=CCO47_RS22715;product=porin OmpL;protein_id=WP_000838828.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4669688 4670536 . + . ID=gene-CCO47_RS22720;Name=CCO47_RS22720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22720;old_locus_tag=CCO47_22720 NZ_CP075113.1 Protein Homology CDS 4669688 4670536 . + 0 ID=cds-WP_001042089.1;Parent=gene-CCO47_RS22720;Dbxref=GenBank:WP_001042089.1;Name=WP_001042089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462895.1;locus_tag=CCO47_RS22720;product=STM4015 family protein;protein_id=WP_001042089.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4670549 4671574 . + . ID=gene-CCO47_RS22725;Name=CCO47_RS22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22725;old_locus_tag=CCO47_22725 NZ_CP075113.1 Protein Homology CDS 4670549 4671574 . + 0 ID=cds-WP_001751728.1;Parent=gene-CCO47_RS22725;Dbxref=GenBank:WP_001751728.1;Name=WP_001751728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462894.3;locus_tag=CCO47_RS22725;product=STM4014 family protein;protein_id=WP_001751728.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4671567 4672442 . + . ID=gene-CCO47_RS22730;Name=CCO47_RS22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22730;old_locus_tag=CCO47_22730 NZ_CP075113.1 Protein Homology CDS 4671567 4672442 . + 0 ID=cds-WP_000282799.1;Parent=gene-CCO47_RS22730;Dbxref=GenBank:WP_000282799.1;Name=WP_000282799.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462893.3;locus_tag=CCO47_RS22730;product=STM4013/SEN3800 family hydrolase;protein_id=WP_000282799.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4672444 4673684 . + . ID=gene-CCO47_RS22735;Name=CCO47_RS22735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS22735;old_locus_tag=CCO47_22735;pseudo=true NZ_CP075113.1 Protein Homology CDS 4672444 4673684 . + 0 ID=cds-CCO47_RS22735;Parent=gene-CCO47_RS22735;Note=frameshifted;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462892.1;locus_tag=CCO47_RS22735;product=STM4012 family radical SAM protein;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 4673681 4674559 . + . ID=gene-CCO47_RS22740;Name=CCO47_RS22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22740;old_locus_tag=CCO47_22740 NZ_CP075113.1 Protein Homology CDS 4673681 4674559 . + 0 ID=cds-WP_001575207.1;Parent=gene-CCO47_RS22740;Dbxref=GenBank:WP_001575207.1;Name=WP_001575207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462891.1;locus_tag=CCO47_RS22740;product=STM4011 family radical SAM protein;protein_id=WP_001575207.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4674544 4675278 . + . ID=gene-CCO47_RS22745;Name=CCO47_RS22745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22745;old_locus_tag=CCO47_22745 NZ_CP075113.1 Protein Homology CDS 4674544 4675278 . + 0 ID=cds-WP_001270585.1;Parent=gene-CCO47_RS22745;Dbxref=GenBank:WP_001270585.1;Name=WP_001270585.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462890.1;locus_tag=CCO47_RS22745;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_001270585.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4675333 4677156 . - . ID=gene-CCO47_RS22750;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=CCO47_RS22750;old_locus_tag=CCO47_22750 NZ_CP075113.1 Protein Homology CDS 4675333 4677156 . - 0 ID=cds-WP_000572064.1;Parent=gene-CCO47_RS22750;Dbxref=GenBank:WP_000572064.1;Name=WP_000572064.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462889.1;locus_tag=CCO47_RS22750;product=ribosome-dependent GTPase TypA;protein_id=WP_000572064.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4677532 4678941 . + . ID=gene-CCO47_RS22755;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=CCO47_RS22755;old_locus_tag=CCO47_22755 NZ_CP075113.1 Protein Homology CDS 4677532 4678941 . + 0 ID=cds-WP_001271699.1;Parent=gene-CCO47_RS22755;Dbxref=GenBank:WP_001271699.1;Name=WP_001271699.1;Ontology_term=GO:0008152,GO:1901704,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=metabolic process|0008152||IEA,L-glutamine biosynthetic process|1901704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=CCO47_RS22755;product=glutamate--ammonia ligase;protein_id=WP_001271699.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4679216 4680265 . + . ID=gene-CCO47_RS22760;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=CCO47_RS22760;old_locus_tag=CCO47_22760 NZ_CP075113.1 Protein Homology CDS 4679216 4680265 . + 0 ID=cds-WP_000146192.1;Parent=gene-CCO47_RS22760;Dbxref=GenBank:WP_000146192.1;Name=WP_000146192.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462886.1;locus_tag=CCO47_RS22760;product=nitrogen regulation protein NR(II);protein_id=WP_000146192.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4680274 4681683 . + . ID=gene-CCO47_RS22765;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=CCO47_RS22765;old_locus_tag=CCO47_22765 NZ_CP075113.1 Protein Homology CDS 4680274 4681683 . + 0 ID=cds-WP_001188783.1;Parent=gene-CCO47_RS22765;Dbxref=GenBank:WP_001188783.1;Name=WP_001188783.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=CCO47_RS22765;product=nitrogen regulation protein NR(I);protein_id=WP_001188783.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4681796 4681906 . + . ID=gene-CCO47_RS22770;Name=CCO47_RS22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22770;old_locus_tag=CCO47_22770 NZ_CP075113.1 Protein Homology CDS 4681796 4681906 . + 0 ID=cds-WP_001578131.1;Parent=gene-CCO47_RS22770;Dbxref=GenBank:WP_001578131.1;Name=WP_001578131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=CCO47_RS22770;product=YshB family small membrane protein;protein_id=WP_001578131.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4681996 4683369 . - . ID=gene-CCO47_RS22775;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=CCO47_RS22775;old_locus_tag=CCO47_22775 NZ_CP075113.1 Protein Homology CDS 4681996 4683369 . - 0 ID=cds-WP_000003527.1;Parent=gene-CCO47_RS22775;Dbxref=GenBank:WP_000003527.1;Name=WP_000003527.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462884.1;locus_tag=CCO47_RS22775;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_000003527.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4683558 4684073 . - . ID=gene-CCO47_RS22780;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=CCO47_RS22780;old_locus_tag=CCO47_22780 NZ_CP075113.1 Protein Homology CDS 4683558 4684073 . - 0 ID=cds-WP_000743292.1;Parent=gene-CCO47_RS22780;Dbxref=GenBank:WP_000743292.1;Name=WP_000743292.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462883.1;locus_tag=CCO47_RS22780;product=Der GTPase-activating protein YihI;protein_id=WP_000743292.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4684192 4684416 . - . ID=gene-CCO47_RS22785;Name=CCO47_RS22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22785;old_locus_tag=CCO47_22785 NZ_CP075113.1 Protein Homology CDS 4684192 4684416 . - 0 ID=cds-WP_001541209.1;Parent=gene-CCO47_RS22785;Dbxref=GenBank:WP_001541209.1;Name=WP_001541209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=CCO47_RS22785;product=hypothetical protein;protein_id=WP_001541209.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4684656 4685288 . + . ID=gene-CCO47_RS22790;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=CCO47_RS22790;old_locus_tag=CCO47_22790 NZ_CP075113.1 Protein Homology CDS 4684656 4685288 . + 0 ID=cds-WP_000183331.1;Parent=gene-CCO47_RS22790;Dbxref=GenBank:WP_000183331.1;Name=WP_000183331.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462881.1;locus_tag=CCO47_RS22790;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_000183331.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4685409 4685456 . - . ID=gene-CCO47_RS24580;Name=spfP;gbkey=Gene;gene=spfP;gene_biotype=protein_coding;locus_tag=CCO47_RS24580 NZ_CP075113.1 Protein Homology CDS 4685409 4685456 . - 0 ID=cds-WP_071892919.1;Parent=gene-CCO47_RS24580;Dbxref=GenBank:WP_071892919.1;Name=WP_071892919.1;gbkey=CDS;gene=spfP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_013606034.1;locus_tag=CCO47_RS24580;product=small protein SpfP;protein_id=WP_071892919.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4685623 4688409 . - . ID=gene-CCO47_RS22795;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=CCO47_RS22795;old_locus_tag=CCO47_22795 NZ_CP075113.1 Protein Homology CDS 4685623 4688409 . - 0 ID=cds-WP_000249966.1;Parent=gene-CCO47_RS22795;Dbxref=GenBank:WP_000249966.1;Name=WP_000249966.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=CCO47_RS22795;product=DNA polymerase I;protein_id=WP_000249966.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4688797 4689705 . + . ID=gene-CCO47_RS22800;Name=CCO47_RS22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22800;old_locus_tag=CCO47_22800 NZ_CP075113.1 Protein Homology CDS 4688797 4689705 . + 0 ID=cds-WP_000196894.1;Parent=gene-CCO47_RS22800;Dbxref=GenBank:WP_000196894.1;Name=WP_000196894.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462878.1;locus_tag=CCO47_RS22800;product=1-acylglycerol-3-phosphate O-acyltransferase%2C YihG family;protein_id=WP_000196894.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4689718 4690341 . - . ID=gene-CCO47_RS22805;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=CCO47_RS22805;old_locus_tag=CCO47_22805 NZ_CP075113.1 Protein Homology CDS 4689718 4690341 . - 0 ID=cds-WP_000725364.1;Parent=gene-CCO47_RS22805;Dbxref=GenBank:WP_000725364.1;Name=WP_000725364.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462877.1;locus_tag=CCO47_RS22805;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725364.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4690358 4691344 . - . ID=gene-CCO47_RS22810;Name=CCO47_RS22810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22810;old_locus_tag=CCO47_22810 NZ_CP075113.1 Protein Homology CDS 4690358 4691344 . - 0 ID=cds-WP_000999264.1;Parent=gene-CCO47_RS22810;Dbxref=GenBank:WP_000999264.1;Name=WP_000999264.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462876.1;locus_tag=CCO47_RS22810;product=serine/threonine protein kinase;protein_id=WP_000999264.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4691421 4691690 . - . ID=gene-CCO47_RS22815;Name=CCO47_RS22815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22815;old_locus_tag=CCO47_22815 NZ_CP075113.1 Protein Homology CDS 4691421 4691690 . - 0 ID=cds-WP_000649858.1;Parent=gene-CCO47_RS22815;Dbxref=GenBank:WP_000649858.1;Name=WP_000649858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=CCO47_RS22815;product=YihD family protein;protein_id=WP_000649858.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4691760 4692344 . + . ID=gene-CCO47_RS22820;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=CCO47_RS22820;old_locus_tag=CCO47_22820 NZ_CP075113.1 Protein Homology CDS 4691760 4692344 . + 0 ID=cds-WP_001046879.1;Parent=gene-CCO47_RS22820;Dbxref=GenBank:WP_001046879.1;Name=WP_001046879.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462874.1;locus_tag=CCO47_RS22820;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_001046879.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4692341 4692856 . + . ID=gene-CCO47_RS22825;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=CCO47_RS22825;old_locus_tag=CCO47_22825 NZ_CP075113.1 Protein Homology CDS 4692341 4692856 . + 0 ID=cds-WP_072103999.1;Parent=gene-CCO47_RS22825;Dbxref=GenBank:WP_072103999.1;Name=WP_072103999.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462873.1;locus_tag=CCO47_RS22825;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_072103999.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4693159 4693274 . - . ID=gene-CCO47_RS22830;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO47_RS22830;old_locus_tag=CCO47_22830 NZ_CP075113.1 cmsearch rRNA 4693159 4693274 . - . ID=rna-CCO47_RS22830;Parent=gene-CCO47_RS22830;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS22830;product=5S ribosomal RNA NZ_CP075113.1 cmsearch exon 4693159 4693274 . - . ID=exon-CCO47_RS22830-1;Parent=rna-CCO47_RS22830;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS22830;product=5S ribosomal RNA NZ_CP075113.1 RefSeq gene 4693472 4696379 . - . ID=gene-CCO47_RS22835;Name=CCO47_RS22835;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO47_RS22835;old_locus_tag=CCO47_22835 NZ_CP075113.1 cmsearch rRNA 4693472 4696379 . - . ID=rna-CCO47_RS22835;Parent=gene-CCO47_RS22835;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS22835;product=23S ribosomal RNA NZ_CP075113.1 cmsearch exon 4693472 4696379 . - . ID=exon-CCO47_RS22835-1;Parent=rna-CCO47_RS22835;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS22835;product=23S ribosomal RNA NZ_CP075113.1 RefSeq gene 4696562 4696637 . - . ID=gene-CCO47_RS22840;Name=CCO47_RS22840;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS22840;old_locus_tag=CCO47_22840 NZ_CP075113.1 tRNAscan-SE tRNA 4696562 4696637 . - . ID=rna-CCO47_RS22840;Parent=gene-CCO47_RS22840;anticodon=(pos:complement(4696602..4696604));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS22840;product=tRNA-Ala NZ_CP075113.1 tRNAscan-SE exon 4696562 4696637 . - . ID=exon-CCO47_RS22840-1;Parent=rna-CCO47_RS22840;anticodon=(pos:complement(4696602..4696604));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS22840;product=tRNA-Ala NZ_CP075113.1 RefSeq gene 4696747 4696823 . - . ID=gene-CCO47_RS22845;Name=CCO47_RS22845;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS22845;old_locus_tag=CCO47_22845 NZ_CP075113.1 tRNAscan-SE tRNA 4696747 4696823 . - . ID=rna-CCO47_RS22845;Parent=gene-CCO47_RS22845;anticodon=(pos:complement(4696787..4696789));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS22845;product=tRNA-Ile NZ_CP075113.1 tRNAscan-SE exon 4696747 4696823 . - . ID=exon-CCO47_RS22845-1;Parent=rna-CCO47_RS22845;anticodon=(pos:complement(4696787..4696789));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS22845;product=tRNA-Ile NZ_CP075113.1 RefSeq gene 4696893 4698434 . - . ID=gene-CCO47_RS22850;Name=CCO47_RS22850;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO47_RS22850;old_locus_tag=CCO47_22850 NZ_CP075113.1 cmsearch rRNA 4696893 4698434 . - . ID=rna-CCO47_RS22850;Parent=gene-CCO47_RS22850;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS22850;product=16S ribosomal RNA NZ_CP075113.1 cmsearch exon 4696893 4698434 . - . ID=exon-CCO47_RS22850-1;Parent=rna-CCO47_RS22850;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS22850;product=16S ribosomal RNA NZ_CP075113.1 RefSeq gene 4698812 4699357 . - . ID=gene-CCO47_RS22855;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=CCO47_RS22855;old_locus_tag=CCO47_22855 NZ_CP075113.1 Protein Homology CDS 4698812 4699357 . - 0 ID=cds-WP_000853982.1;Parent=gene-CCO47_RS22855;Dbxref=GenBank:WP_000853982.1;Name=WP_000853982.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462872.1;locus_tag=CCO47_RS22855;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853982.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4699369 4700820 . - . ID=gene-CCO47_RS22860;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=CCO47_RS22860;old_locus_tag=CCO47_22860 NZ_CP075113.1 Protein Homology CDS 4699369 4700820 . - 0 ID=cds-WP_000545688.1;Parent=gene-CCO47_RS22860;Dbxref=GenBank:WP_000545688.1;Name=WP_000545688.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=CCO47_RS22860;product=Trk system potassium transporter TrkH;protein_id=WP_000545688.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4700859 4701473 . - . ID=gene-CCO47_RS22865;Name=CCO47_RS22865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22865;old_locus_tag=CCO47_22865 NZ_CP075113.1 Protein Homology CDS 4700859 4701473 . - 0 ID=cds-WP_000378897.1;Parent=gene-CCO47_RS22865;Dbxref=GenBank:WP_000378897.1;Name=WP_000378897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462870.1;locus_tag=CCO47_RS22865;product=IMPACT family protein;protein_id=WP_000378897.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4701473 4702804 . - . ID=gene-CCO47_RS22870;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=CCO47_RS22870;old_locus_tag=CCO47_22870 NZ_CP075113.1 Protein Homology CDS 4701473 4702804 . - 0 ID=cds-WP_000444529.1;Parent=gene-CCO47_RS22870;Dbxref=GenBank:WP_000444529.1;Name=WP_000444529.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=CCO47_RS22870;product=Xaa-Pro dipeptidase;protein_id=WP_000444529.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4702994 4705183 . + . ID=gene-CCO47_RS22875;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=CCO47_RS22875;old_locus_tag=CCO47_22875 NZ_CP075113.1 Protein Homology CDS 4702994 4705183 . + 0 ID=cds-WP_000966003.1;Parent=gene-CCO47_RS22875;Dbxref=GenBank:WP_000966003.1;Name=WP_000966003.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=(3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462868.1;locus_tag=CCO47_RS22875;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_000966003.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4705193 4706356 . + . ID=gene-CCO47_RS22880;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=CCO47_RS22880;old_locus_tag=CCO47_22880 NZ_CP075113.1 Protein Homology CDS 4705193 4706356 . + 0 ID=cds-WP_000438783.1;Parent=gene-CCO47_RS22880;Dbxref=GenBank:WP_000438783.1;Name=WP_000438783.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462867.1;locus_tag=CCO47_RS22880;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_000438783.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4706553 4708376 . - . ID=gene-CCO47_RS22885;Name=CCO47_RS22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22885;old_locus_tag=CCO47_22885 NZ_CP075113.1 Protein Homology CDS 4706553 4708376 . - 0 ID=cds-WP_000669887.1;Parent=gene-CCO47_RS22885;Dbxref=GenBank:WP_000669887.1;Name=WP_000669887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669888.1;locus_tag=CCO47_RS22885;product=aryl-sulfate sulfotransferase;protein_id=WP_000669887.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4708579 4709280 . - . ID=gene-CCO47_RS22890;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=CCO47_RS22890;old_locus_tag=CCO47_22890 NZ_CP075113.1 Protein Homology CDS 4708579 4709280 . - 0 ID=cds-WP_000209832.1;Parent=gene-CCO47_RS22890;Dbxref=GenBank:WP_000209832.1;Name=WP_000209832.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=CCO47_RS22890;product=NAD(P)H-flavin reductase;protein_id=WP_000209832.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4709366 4710844 . - . ID=gene-CCO47_RS22895;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=CCO47_RS22895;old_locus_tag=CCO47_22895 NZ_CP075113.1 Protein Homology CDS 4709366 4710844 . - 0 ID=cds-WP_000339754.1;Parent=gene-CCO47_RS22895;Dbxref=GenBank:WP_000339754.1;Name=WP_000339754.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462863.1;locus_tag=CCO47_RS22895;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_000339754.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4711030 4711518 . + . ID=gene-CCO47_RS22900;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=CCO47_RS22900;old_locus_tag=CCO47_22900 NZ_CP075113.1 Protein Homology CDS 4711030 4711518 . + 0 ID=cds-WP_001192409.1;Parent=gene-CCO47_RS22900;Dbxref=GenBank:WP_001192409.1;Name=WP_001192409.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=CCO47_RS22900;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_001192409.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4711526 4712308 . - . ID=gene-CCO47_RS22905;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=CCO47_RS22905;old_locus_tag=CCO47_22905 NZ_CP075113.1 Protein Homology CDS 4711526 4712308 . - 0 ID=cds-WP_000459637.1;Parent=gene-CCO47_RS22905;Dbxref=GenBank:WP_000459637.1;Name=WP_000459637.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462861.3;locus_tag=CCO47_RS22905;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_000459637.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4712350 4713129 . - . ID=gene-CCO47_RS22910;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=CCO47_RS22910;old_locus_tag=CCO47_22910 NZ_CP075113.1 Protein Homology CDS 4712350 4713129 . - 0 ID=cds-WP_000257554.1;Parent=gene-CCO47_RS22910;Dbxref=GenBank:WP_000257554.1;Name=WP_000257554.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462860.1;locus_tag=CCO47_RS22910;product=Sec-independent protein translocase subunit TatC;protein_id=WP_000257554.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4713132 4713680 . - . ID=gene-CCO47_RS22915;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=CCO47_RS22915;old_locus_tag=CCO47_22915 NZ_CP075113.1 Protein Homology CDS 4713132 4713680 . - 0 ID=cds-WP_000459612.1;Parent=gene-CCO47_RS22915;Dbxref=GenBank:WP_000459612.1;Name=WP_000459612.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462859.1;locus_tag=CCO47_RS22915;product=Sec-independent protein translocase protein TatB;protein_id=WP_000459612.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4713684 4713938 . - . ID=gene-CCO47_RS22920;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=CCO47_RS22920;old_locus_tag=CCO47_22920 NZ_CP075113.1 Protein Homology CDS 4713684 4713938 . - 0 ID=cds-WP_000508972.1;Parent=gene-CCO47_RS22920;Dbxref=GenBank:WP_000508972.1;Name=WP_000508972.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462858.1;locus_tag=CCO47_RS22920;product=Sec-independent protein translocase subunit TatA;protein_id=WP_000508972.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4714144 4715784 . - . ID=gene-CCO47_RS22925;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=CCO47_RS22925;old_locus_tag=CCO47_22925 NZ_CP075113.1 Protein Homology CDS 4714144 4715784 . - 0 ID=cds-WP_000187559.1;Parent=gene-CCO47_RS22925;Dbxref=GenBank:WP_000187559.1;Name=WP_000187559.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462857.1;locus_tag=CCO47_RS22925;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_000187559.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4715781 4716386 . - . ID=gene-CCO47_RS22930;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=CCO47_RS22930;old_locus_tag=CCO47_22930 NZ_CP075113.1 Protein Homology CDS 4715781 4716386 . - 0 ID=cds-WP_001116092.1;Parent=gene-CCO47_RS22930;Dbxref=GenBank:WP_001116092.1;Name=WP_001116092.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462856.1;locus_tag=CCO47_RS22930;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_001116092.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4716396 4717151 . - . ID=gene-CCO47_RS22935;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=CCO47_RS22935;old_locus_tag=CCO47_22935 NZ_CP075113.1 Protein Homology CDS 4716396 4717151 . - 0 ID=cds-WP_000229009.1;Parent=gene-CCO47_RS22935;Dbxref=GenBank:WP_000229009.1;Name=WP_000229009.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462855.1;locus_tag=CCO47_RS22935;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000229009.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4717247 4718677 . - . ID=gene-CCO47_RS22940;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=CCO47_RS22940;old_locus_tag=CCO47_22940 NZ_CP075113.1 Protein Homology CDS 4717247 4718677 . - 0 ID=cds-WP_000355562.1;Parent=gene-CCO47_RS22940;Dbxref=GenBank:WP_000355562.1;Name=WP_000355562.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462854.1;locus_tag=CCO47_RS22940;product=DNA recombination protein RmuC;protein_id=WP_000355562.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4718817 4719578 . - . ID=gene-CCO47_RS22945;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=CCO47_RS22945;old_locus_tag=CCO47_22945 NZ_CP075113.1 Protein Homology CDS 4718817 4719578 . - 0 ID=cds-WP_000045169.1;Parent=gene-CCO47_RS22945;Dbxref=GenBank:WP_000045169.1;Name=WP_000045169.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462853.1;locus_tag=CCO47_RS22945;product=uridine phosphorylase;protein_id=WP_000045169.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4719887 4720642 . + . ID=gene-CCO47_RS22950;Name=CCO47_RS22950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22950;old_locus_tag=CCO47_22950 NZ_CP075113.1 Protein Homology CDS 4719887 4720642 . + 0 ID=cds-WP_000582017.1;Parent=gene-CCO47_RS22950;Dbxref=GenBank:WP_000582017.1;Name=WP_000582017.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462852.1;locus_tag=CCO47_RS22950;product=dienelactone hydrolase family protein;protein_id=WP_000582017.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4720722 4722065 . - . ID=gene-CCO47_RS22955;Name=CCO47_RS22955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22955;old_locus_tag=CCO47_22955 NZ_CP075113.1 Protein Homology CDS 4720722 4722065 . - 0 ID=cds-WP_000017955.1;Parent=gene-CCO47_RS22955;Dbxref=GenBank:WP_000017955.1;Name=WP_000017955.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462851.1;locus_tag=CCO47_RS22955;product=anaerobic sulfatase maturase;protein_id=WP_000017955.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4722408 4724672 . - . ID=gene-CCO47_RS22960;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=CCO47_RS22960;old_locus_tag=CCO47_22960 NZ_CP075113.1 Protein Homology CDS 4722408 4724672 . - 0 ID=cds-WP_000154200.1;Parent=gene-CCO47_RS22960;Dbxref=GenBank:WP_000154200.1;Name=WP_000154200.1;Ontology_term=GO:0008652,GO:0071265,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=CCO47_RS22960;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_000154200.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4724921 4725874 . + . ID=gene-CCO47_RS22965;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=CCO47_RS22965;old_locus_tag=CCO47_22965 NZ_CP075113.1 Protein Homology CDS 4724921 4725874 . + 0 ID=cds-WP_000569791.1;Parent=gene-CCO47_RS22965;Dbxref=GenBank:WP_000569791.1;Name=WP_000569791.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462849.1;locus_tag=CCO47_RS22965;product=HTH-type transcriptional regulator MetR;protein_id=WP_000569791.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4725762 4726661 . - . ID=gene-CCO47_RS22970;Name=CCO47_RS22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS22970;old_locus_tag=CCO47_22970 NZ_CP075113.1 Protein Homology CDS 4725762 4726661 . - 0 ID=cds-WP_001196257.1;Parent=gene-CCO47_RS22970;Dbxref=GenBank:WP_001196257.1;Name=WP_001196257.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462848.1;locus_tag=CCO47_RS22970;product=carboxylate/amino acid/amine transporter;protein_id=WP_001196257.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4726742 4727542 . - . ID=gene-CCO47_RS22975;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=CCO47_RS22975;old_locus_tag=CCO47_22975 NZ_CP075113.1 Protein Homology CDS 4726742 4727542 . - 0 ID=cds-WP_000285338.1;Parent=gene-CCO47_RS22975;Dbxref=GenBank:WP_000285338.1;Name=WP_000285338.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462847.1;locus_tag=CCO47_RS22975;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_000285338.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4727558 4728574 . - . ID=gene-CCO47_RS22980;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=CCO47_RS22980;old_locus_tag=CCO47_22980 NZ_CP075113.1 Protein Homology CDS 4727558 4728574 . - 0 ID=cds-WP_000487685.1;Parent=gene-CCO47_RS22980;Dbxref=GenBank:WP_000487685.1;Name=WP_000487685.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=CCO47_RS22980;product=lysophospholipase L2;protein_id=WP_000487685.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4728685 4729305 . + . ID=gene-CCO47_RS22985;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=CCO47_RS22985;old_locus_tag=CCO47_22985 NZ_CP075113.1 Protein Homology CDS 4728685 4729305 . + 0 ID=cds-WP_000142525.1;Parent=gene-CCO47_RS22985;Dbxref=GenBank:WP_000142525.1;Name=WP_000142525.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462845.1;locus_tag=CCO47_RS22985;product=homoserine/homoserine lactone efflux protein;protein_id=WP_000142525.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4729345 4729965 . - . ID=gene-CCO47_RS22990;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=CCO47_RS22990;old_locus_tag=CCO47_22990 NZ_CP075113.1 Protein Homology CDS 4729345 4729965 . - 0 ID=cds-WP_000928814.1;Parent=gene-CCO47_RS22990;Dbxref=GenBank:WP_000928814.1;Name=WP_000928814.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462844.1;locus_tag=CCO47_RS22990;product=threonine export protein RhtC;protein_id=WP_000928814.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4730029 4731858 . - . ID=gene-CCO47_RS22995;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=CCO47_RS22995;old_locus_tag=CCO47_22995 NZ_CP075113.1 Protein Homology CDS 4730029 4731858 . - 0 ID=cds-WP_001664819.1;Parent=gene-CCO47_RS22995;Dbxref=GenBank:WP_001664819.1;Name=WP_001664819.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=CCO47_RS22995;product=ATP-dependent DNA helicase RecQ;protein_id=WP_001664819.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4731942 4732811 . - . ID=gene-CCO47_RS23000;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=CCO47_RS23000;old_locus_tag=CCO47_23000 NZ_CP075113.1 Protein Homology CDS 4731942 4732811 . - 0 ID=cds-WP_001201692.1;Parent=gene-CCO47_RS23000;Dbxref=GenBank:WP_001201692.1;Name=WP_001201692.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=glycerophospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462842.1;locus_tag=CCO47_RS23000;product=phospholipase A;protein_id=WP_001201692.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4732976 4733443 . + . ID=gene-CCO47_RS23005;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=CCO47_RS23005;old_locus_tag=CCO47_23005 NZ_CP075113.1 Protein Homology CDS 4732976 4733443 . + 0 ID=cds-WP_001277136.1;Parent=gene-CCO47_RS23005;Dbxref=GenBank:WP_001277136.1;Name=WP_001277136.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=CCO47_RS23005;product=acyl-CoA thioesterase YigI;protein_id=WP_001277136.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4733487 4734374 . + . ID=gene-CCO47_RS23010;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=CCO47_RS23010;old_locus_tag=CCO47_23010 NZ_CP075113.1 Protein Homology CDS 4733487 4734374 . + 0 ID=cds-WP_000339081.1;Parent=gene-CCO47_RS23010;Dbxref=GenBank:WP_000339081.1;Name=WP_000339081.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000339076.1;locus_tag=CCO47_RS23010;product=EamA family transporter RarD;protein_id=WP_000339081.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4734414 4734710 . - . ID=gene-CCO47_RS23015;Name=CCO47_RS23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23015;old_locus_tag=CCO47_23015 NZ_CP075113.1 Protein Homology CDS 4734414 4734710 . - 0 ID=cds-WP_001170054.1;Parent=gene-CCO47_RS23015;Dbxref=GenBank:WP_001170054.1;Name=WP_001170054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001170054.1;locus_tag=CCO47_RS23015;product=hypothetical protein;protein_id=WP_001170054.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4734885 4735265 . + . ID=gene-CCO47_RS23020;Name=CCO47_RS23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23020;old_locus_tag=CCO47_23020 NZ_CP075113.1 Protein Homology CDS 4734885 4735265 . + 0 ID=cds-WP_000619297.1;Parent=gene-CCO47_RS23020;Dbxref=GenBank:WP_000619297.1;Name=WP_000619297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727015.1;locus_tag=CCO47_RS23020;product=hypothetical protein;protein_id=WP_000619297.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4735313 4736263 . - . ID=gene-CCO47_RS23025;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=CCO47_RS23025;old_locus_tag=CCO47_23025 NZ_CP075113.1 Protein Homology CDS 4735313 4736263 . - 0 ID=cds-WP_000947139.1;Parent=gene-CCO47_RS23025;Dbxref=GenBank:WP_000947139.1;Name=WP_000947139.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=CCO47_RS23025;product=magnesium/cobalt transporter CorA;protein_id=WP_000947139.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4736419 4736475 . - . ID=gene-CCO47_RS23030;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=CCO47_RS23030;old_locus_tag=CCO47_23030 NZ_CP075113.1 Protein Homology CDS 4736419 4736475 . - 0 ID=cds-WP_212723238.1;Parent=gene-CCO47_RS23030;Dbxref=GenBank:WP_212723238.1;Name=WP_212723238.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=CCO47_RS23030;product=YsgD/CorL family protein;protein_id=WP_212723238.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4736735 4738897 . - . ID=gene-CCO47_RS23035;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=CCO47_RS23035;old_locus_tag=CCO47_23035 NZ_CP075113.1 Protein Homology CDS 4736735 4738897 . - 0 ID=cds-WP_000383436.1;Parent=gene-CCO47_RS23035;Dbxref=GenBank:WP_000383436.1;Name=WP_000383436.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462836.1;locus_tag=CCO47_RS23035;product=DNA helicase II;protein_id=WP_000383436.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4739033 4739749 . - . ID=gene-CCO47_RS23040;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=CCO47_RS23040;old_locus_tag=CCO47_23040 NZ_CP075113.1 Protein Homology CDS 4739033 4739749 . - 0 ID=cds-WP_001213560.1;Parent=gene-CCO47_RS23040;Dbxref=GenBank:WP_001213560.1;Name=WP_001213560.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462835.1;locus_tag=CCO47_RS23040;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_001213560.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4739749 4740651 . - . ID=gene-CCO47_RS23045;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=CCO47_RS23045;old_locus_tag=CCO47_23045 NZ_CP075113.1 Protein Homology CDS 4739749 4740651 . - 0 ID=cds-WP_000132878.1;Parent=gene-CCO47_RS23045;Dbxref=GenBank:WP_000132878.1;Name=WP_000132878.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462834.1;locus_tag=CCO47_RS23045;product=tyrosine recombinase XerC;protein_id=WP_000132878.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4740648 4741355 . - . ID=gene-CCO47_RS23050;Name=CCO47_RS23050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23050;old_locus_tag=CCO47_23050 NZ_CP075113.1 Protein Homology CDS 4740648 4741355 . - 0 ID=cds-WP_000812763.1;Parent=gene-CCO47_RS23050;Dbxref=GenBank:WP_000812763.1;Name=WP_000812763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462833.1;locus_tag=CCO47_RS23050;product=DUF484 domain-containing protein;protein_id=WP_000812763.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4741352 4742176 . - . ID=gene-CCO47_RS23055;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=CCO47_RS23055;old_locus_tag=CCO47_23055 NZ_CP075113.1 Protein Homology CDS 4741352 4742176 . - 0 ID=cds-WP_001160671.1;Parent=gene-CCO47_RS23055;Dbxref=GenBank:WP_001160671.1;Name=WP_001160671.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=L-lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=CCO47_RS23055;product=diaminopimelate epimerase;protein_id=WP_001160671.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4742213 4742416 . - . ID=gene-CCO47_RS23060;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=CCO47_RS23060;old_locus_tag=CCO47_23060 NZ_CP075113.1 Protein Homology CDS 4742213 4742416 . - 0 ID=cds-WP_000799903.1;Parent=gene-CCO47_RS23060;Dbxref=GenBank:WP_000799903.1;Name=WP_000799903.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462831.1;locus_tag=CCO47_RS23060;product=LPS translocon maturation chaperone LptM;protein_id=WP_000799903.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4742602 4742853 . + . ID=gene-CCO47_RS23065;Name=CCO47_RS23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23065;old_locus_tag=CCO47_23065 NZ_CP075113.1 GeneMarkS-2+ CDS 4742602 4742853 . + 0 ID=cds-WP_001594384.1;Parent=gene-CCO47_RS23065;Dbxref=GenBank:WP_001594384.1;Name=WP_001594384.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO47_RS23065;product=hypothetical protein;protein_id=WP_001594384.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4742823 4743125 . + . ID=gene-CCO47_RS23070;Name=CCO47_RS23070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS23070;old_locus_tag=CCO47_23070;partial=true;pseudo=true;start_range=.,4742823 NZ_CP075113.1 Protein Homology CDS 4742823 4743125 . + 0 ID=cds-CCO47_RS23070;Parent=gene-CCO47_RS23070;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200019.1;locus_tag=CCO47_RS23070;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4742823;transl_table=11 NZ_CP075113.1 RefSeq gene 4743113 4743502 . + . ID=gene-CCO47_RS23075;Name=CCO47_RS23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23075;old_locus_tag=CCO47_23075 NZ_CP075113.1 Protein Homology CDS 4743113 4743502 . + 0 ID=cds-WP_001125566.1;Parent=gene-CCO47_RS23075;Dbxref=GenBank:WP_001125566.1;Name=WP_001125566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462830.1;locus_tag=CCO47_RS23075;product=DUF3021 family protein;protein_id=WP_001125566.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4743572 4743892 . + . ID=gene-CCO47_RS23080;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=CCO47_RS23080;old_locus_tag=CCO47_23080 NZ_CP075113.1 Protein Homology CDS 4743572 4743892 . + 0 ID=cds-WP_000999925.1;Parent=gene-CCO47_RS23080;Dbxref=GenBank:WP_000999925.1;Name=WP_000999925.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=CCO47_RS23080;product=iron donor protein CyaY;protein_id=WP_000999925.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4743970 4746516 . - . ID=gene-CCO47_RS23085;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=CCO47_RS23085;old_locus_tag=CCO47_23085 NZ_CP075113.1 Protein Homology CDS 4743970 4746516 . - 0 ID=cds-WP_000281718.1;Parent=gene-CCO47_RS23085;Dbxref=GenBank:WP_000281718.1;Name=WP_000281718.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462825.1;locus_tag=CCO47_RS23085;product=class I adenylate cyclase;protein_id=WP_000281718.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4746893 4747834 . + . ID=gene-CCO47_RS23090;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=CCO47_RS23090;old_locus_tag=CCO47_23090 NZ_CP075113.1 Protein Homology CDS 4746893 4747834 . + 0 ID=cds-WP_001521319.1;Parent=gene-CCO47_RS23090;Dbxref=GenBank:WP_001521319.1;Name=WP_001521319.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=CCO47_RS23090;product=hydroxymethylbilane synthase;protein_id=WP_001521319.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4747831 4748571 . + . ID=gene-CCO47_RS23095;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=CCO47_RS23095;old_locus_tag=CCO47_23095 NZ_CP075113.1 Protein Homology CDS 4747831 4748571 . + 0 ID=cds-WP_000025494.1;Parent=gene-CCO47_RS23095;Dbxref=GenBank:WP_000025494.1;Name=WP_000025494.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=CCO47_RS23095;product=uroporphyrinogen-III synthase;protein_id=WP_000025494.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4748593 4749732 . + . ID=gene-CCO47_RS23100;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=CCO47_RS23100;old_locus_tag=CCO47_23100 NZ_CP075113.1 Protein Homology CDS 4748593 4749732 . + 0 ID=cds-WP_094912466.1;Parent=gene-CCO47_RS23100;Dbxref=GenBank:WP_094912466.1;Name=WP_094912466.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462822.1;locus_tag=CCO47_RS23100;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_094912466.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4749735 4750931 . + . ID=gene-CCO47_RS23105;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=CCO47_RS23105;old_locus_tag=CCO47_23105 NZ_CP075113.1 Protein Homology CDS 4749735 4750931 . + 0 ID=cds-WP_047333932.1;Parent=gene-CCO47_RS23105;Dbxref=GenBank:WP_047333932.1;Name=WP_047333932.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=CCO47_RS23105;product=protoheme IX biogenesis protein HemY;protein_id=WP_047333932.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4751513 4751589 . - . ID=gene-CCO47_RS23110;Name=CCO47_RS23110;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS23110;old_locus_tag=CCO47_23110 NZ_CP075113.1 tRNAscan-SE tRNA 4751513 4751589 . - . ID=rna-CCO47_RS23110;Parent=gene-CCO47_RS23110;anticodon=(pos:complement(4751553..4751555));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS23110;product=tRNA-Pro NZ_CP075113.1 tRNAscan-SE exon 4751513 4751589 . - . ID=exon-CCO47_RS23110-1;Parent=rna-CCO47_RS23110;anticodon=(pos:complement(4751553..4751555));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS23110;product=tRNA-Pro NZ_CP075113.1 RefSeq gene 4751632 4751718 . - . ID=gene-CCO47_RS23115;Name=CCO47_RS23115;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS23115;old_locus_tag=CCO47_23115 NZ_CP075113.1 tRNAscan-SE tRNA 4751632 4751718 . - . ID=rna-CCO47_RS23115;Parent=gene-CCO47_RS23115;anticodon=(pos:complement(4751682..4751684));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS23115;product=tRNA-Leu NZ_CP075113.1 tRNAscan-SE exon 4751632 4751718 . - . ID=exon-CCO47_RS23115-1;Parent=rna-CCO47_RS23115;anticodon=(pos:complement(4751682..4751684));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS23115;product=tRNA-Leu NZ_CP075113.1 RefSeq gene 4751739 4751814 . - . ID=gene-CCO47_RS23120;Name=CCO47_RS23120;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS23120;old_locus_tag=CCO47_23120 NZ_CP075113.1 tRNAscan-SE tRNA 4751739 4751814 . - . ID=rna-CCO47_RS23120;Parent=gene-CCO47_RS23120;anticodon=(pos:complement(4751779..4751781));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS23120;product=tRNA-His NZ_CP075113.1 tRNAscan-SE exon 4751739 4751814 . - . ID=exon-CCO47_RS23120-1;Parent=rna-CCO47_RS23120;anticodon=(pos:complement(4751779..4751781));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS23120;product=tRNA-His NZ_CP075113.1 RefSeq gene 4751869 4751945 . - . ID=gene-CCO47_RS23125;Name=CCO47_RS23125;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS23125;old_locus_tag=CCO47_23125 NZ_CP075113.1 tRNAscan-SE tRNA 4751869 4751945 . - . ID=rna-CCO47_RS23125;Parent=gene-CCO47_RS23125;anticodon=(pos:complement(4751909..4751911));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS23125;product=tRNA-Arg NZ_CP075113.1 tRNAscan-SE exon 4751869 4751945 . - . ID=exon-CCO47_RS23125-1;Parent=rna-CCO47_RS23125;anticodon=(pos:complement(4751909..4751911));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS23125;product=tRNA-Arg NZ_CP075113.1 RefSeq gene 4752048 4753433 . - . ID=gene-CCO47_RS23130;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=CCO47_RS23130;old_locus_tag=CCO47_23130 NZ_CP075113.1 Protein Homology CDS 4752048 4753433 . - 0 ID=cds-WP_080200835.1;Parent=gene-CCO47_RS23130;Dbxref=GenBank:WP_080200835.1;Name=WP_080200835.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462820.1;locus_tag=CCO47_RS23130;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_080200835.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4753640 4754380 . - . ID=gene-CCO47_RS23135;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=CCO47_RS23135;old_locus_tag=CCO47_23135 NZ_CP075113.1 Protein Homology CDS 4753640 4754380 . - 0 ID=cds-WP_000183621.1;Parent=gene-CCO47_RS23135;Dbxref=GenBank:WP_000183621.1;Name=WP_000183621.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462819.1;locus_tag=CCO47_RS23135;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_000183621.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4754377 4755735 . - . ID=gene-CCO47_RS23140;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=CCO47_RS23140;old_locus_tag=CCO47_23140 NZ_CP075113.1 Protein Homology CDS 4754377 4755735 . - 0 ID=cds-WP_000055605.1;Parent=gene-CCO47_RS23140;Dbxref=GenBank:WP_000055605.1;Name=WP_000055605.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462818.1;locus_tag=CCO47_RS23140;product=ECA oligosaccharide polymerase;protein_id=WP_000055605.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4755732 4756811 . - . ID=gene-CCO47_RS23145;Name=CCO47_RS23145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23145;old_locus_tag=CCO47_23145 NZ_CP075113.1 Protein Homology CDS 4755732 4756811 . - 0 ID=cds-WP_000217198.1;Parent=gene-CCO47_RS23145;Dbxref=GenBank:WP_000217198.1;Name=WP_000217198.1;Ontology_term=GO:0000271,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462817.1;locus_tag=CCO47_RS23145;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_000217198.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4756808 4758058 . - . ID=gene-CCO47_RS23150;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=CCO47_RS23150;old_locus_tag=CCO47_23150 NZ_CP075113.1 Protein Homology CDS 4756808 4758058 . - 0 ID=cds-WP_000050305.1;Parent=gene-CCO47_RS23150;Dbxref=GenBank:WP_000050305.1;Name=WP_000050305.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=CCO47_RS23150;product=lipid III flippase WzxE;protein_id=WP_000050305.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4758060 4759190 . - . ID=gene-CCO47_RS23155;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=CCO47_RS23155;old_locus_tag=CCO47_23155 NZ_CP075113.1 Protein Homology CDS 4758060 4759190 . - 0 ID=cds-WP_000612080.1;Parent=gene-CCO47_RS23155;Dbxref=GenBank:WP_000612080.1;Name=WP_000612080.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462815.1;locus_tag=CCO47_RS23155;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_000612080.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4759195 4759872 . - . ID=gene-CCO47_RS23160;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=CCO47_RS23160;old_locus_tag=CCO47_23160 NZ_CP075113.1 Protein Homology CDS 4759195 4759872 . - 0 ID=cds-WP_001145156.1;Parent=gene-CCO47_RS23160;Dbxref=GenBank:WP_001145156.1;Name=WP_001145156.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=CCO47_RS23160;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_001145156.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4759850 4760014 . - . ID=gene-CCO47_RS23165;Name=CCO47_RS23165;end_range=4760014,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS23165;old_locus_tag=CCO47_23165;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 4759850 4760014 . - 0 ID=cds-CCO47_RS23165;Parent=gene-CCO47_RS23165;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4760014,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=CCO47_RS23165;partial=true;product=glucose-1-phosphate thymidylyltransferase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 4760107 4761174 . - . ID=gene-CCO47_RS23170;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=CCO47_RS23170;old_locus_tag=CCO47_23170 NZ_CP075113.1 Protein Homology CDS 4760107 4761174 . - 0 ID=cds-WP_000822143.1;Parent=gene-CCO47_RS23170;Dbxref=GenBank:WP_000822143.1;Name=WP_000822143.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462812.1;locus_tag=CCO47_RS23170;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_000822143.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4761174 4762436 . - . ID=gene-CCO47_RS23175;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=CCO47_RS23175;old_locus_tag=CCO47_23175 NZ_CP075113.1 Protein Homology CDS 4761174 4762436 . - 0 ID=cds-WP_000011238.1;Parent=gene-CCO47_RS23175;Dbxref=GenBank:WP_000011238.1;Name=WP_000011238.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=CCO47_RS23175;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_000011238.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4762433 4763563 . - . ID=gene-CCO47_RS23180;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=CCO47_RS23180;old_locus_tag=CCO47_23180 NZ_CP075113.1 Protein Homology CDS 4762433 4763563 . - 0 ID=cds-WP_000866685.1;Parent=gene-CCO47_RS23180;Dbxref=GenBank:WP_000866685.1;Name=WP_000866685.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=CCO47_RS23180;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_000866685.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4763619 4764665 . - . ID=gene-CCO47_RS23185;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=CCO47_RS23185;old_locus_tag=CCO47_23185 NZ_CP075113.1 Protein Homology CDS 4763619 4764665 . - 0 ID=cds-WP_000193413.1;Parent=gene-CCO47_RS23185;Dbxref=GenBank:WP_000193413.1;Name=WP_000193413.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=CCO47_RS23185;product=ECA polysaccharide chain length modulation protein;protein_id=WP_000193413.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4764677 4765780 . - . ID=gene-CCO47_RS23190;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=CCO47_RS23190;old_locus_tag=CCO47_23190 NZ_CP075113.1 Protein Homology CDS 4764677 4765780 . - 0 ID=cds-WP_000771937.1;Parent=gene-CCO47_RS23190;Dbxref=GenBank:WP_000771937.1;Name=WP_000771937.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462808.1;locus_tag=CCO47_RS23190;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_000771937.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4766010 4767269 . - . ID=gene-CCO47_RS23195;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=CCO47_RS23195;old_locus_tag=CCO47_23195 NZ_CP075113.1 Protein Homology CDS 4766010 4767269 . - 0 ID=cds-WP_001054532.1;Parent=gene-CCO47_RS23195;Dbxref=GenBank:WP_001054532.1;Name=WP_001054532.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=CCO47_RS23195;product=transcription termination factor Rho;protein_id=WP_001054532.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4767357 4767440 . - . ID=gene-CCO47_RS24325;Name=CCO47_RS24325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24325 NZ_CP075113.1 Protein Homology CDS 4767357 4767440 . - 0 ID=cds-WP_134820045.1;Parent=gene-CCO47_RS24325;Dbxref=GenBank:WP_134820045.1;Name=WP_134820045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=CCO47_RS24325;product=rho operon leader peptide;protein_id=WP_134820045.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4767688 4768017 . - . ID=gene-CCO47_RS23205;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=CCO47_RS23205;old_locus_tag=CCO47_23205 NZ_CP075113.1 Protein Homology CDS 4767688 4768017 . - 0 ID=cds-WP_001280776.1;Parent=gene-CCO47_RS23205;Dbxref=GenBank:WP_001280776.1;Name=WP_001280776.1;Ontology_term=GO:0045454,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=CCO47_RS23205;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4768161 4769426 . + . ID=gene-CCO47_RS23210;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=CCO47_RS23210;old_locus_tag=CCO47_23210 NZ_CP075113.1 Protein Homology CDS 4768161 4769426 . + 0 ID=cds-WP_000047531.1;Parent=gene-CCO47_RS23210;Dbxref=GenBank:WP_000047531.1;Name=WP_000047531.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462805.1;locus_tag=CCO47_RS23210;product=ATP-dependent RNA helicase RhlB;protein_id=WP_000047531.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4769563 4771044 . + . ID=gene-CCO47_RS23215;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=CCO47_RS23215;old_locus_tag=CCO47_23215 NZ_CP075113.1 Protein Homology CDS 4769563 4771044 . + 0 ID=cds-WP_001089454.1;Parent=gene-CCO47_RS23215;Dbxref=GenBank:WP_001089454.1;Name=WP_001089454.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462804.1;locus_tag=CCO47_RS23215;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_001089454.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4771084 4773108 . - . ID=gene-CCO47_RS23220;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=CCO47_RS23220;old_locus_tag=CCO47_23220 NZ_CP075113.1 Protein Homology CDS 4771084 4773108 . - 0 ID=cds-WP_001238842.1;Parent=gene-CCO47_RS23220;Dbxref=GenBank:WP_001238842.1;Name=WP_001238842.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462803.1;locus_tag=CCO47_RS23220;product=DNA helicase Rep;protein_id=WP_001238842.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4773208 4773345 . - . ID=gene-CCO47_RS23225;Name=CCO47_RS23225;end_range=4773345,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS23225;old_locus_tag=CCO47_23225;partial=true;pseudo=true NZ_CP075113.1 Protein Homology CDS 4773208 4773345 . - 0 ID=cds-CCO47_RS23225;Parent=gene-CCO47_RS23225;Note=involved in nicotinamide riboside transport%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4773345,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506088.1;locus_tag=CCO47_RS23225;partial=true;product=nicotinamide riboside transporter PnuC;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4773297 4773452 . - . ID=gene-CCO47_RS24375;Name=CCO47_RS24375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24375;partial=true;pseudo=true;start_range=.,4773297 NZ_CP075113.1 Protein Homology CDS 4773297 4773452 . - 0 ID=cds-CCO47_RS24375;Parent=gene-CCO47_RS24375;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442089.1;locus_tag=CCO47_RS24375;partial=true;product=Crp/Fnr family transcriptional regulator;pseudo=true;start_range=.,4773297;transl_table=11 NZ_CP075113.1 RefSeq gene 4773646 4773927 . + . ID=gene-CCO47_RS23230;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=CCO47_RS23230;old_locus_tag=CCO47_23230 NZ_CP075113.1 Protein Homology CDS 4773646 4773927 . + 0 ID=cds-WP_001096806.1;Parent=gene-CCO47_RS23230;Dbxref=GenBank:WP_001096806.1;Name=WP_001096806.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462801.1;locus_tag=CCO47_RS23230;product=peptidylprolyl isomerase PpiC;protein_id=WP_001096806.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4774019 4775494 . - . ID=gene-CCO47_RS23235;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=CCO47_RS23235;old_locus_tag=CCO47_23235 NZ_CP075113.1 Protein Homology CDS 4774019 4775494 . - 0 ID=cds-WP_000024940.1;Parent=gene-CCO47_RS23235;Dbxref=GenBank:WP_000024940.1;Name=WP_000024940.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=CCO47_RS23235;product=ketol-acid reductoisomerase;protein_id=WP_000024940.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4775659 4776546 . + . ID=gene-CCO47_RS23240;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=CCO47_RS23240;old_locus_tag=CCO47_23240 NZ_CP075113.1 Protein Homology CDS 4775659 4776546 . + 0 ID=cds-WP_094912470.1;Parent=gene-CCO47_RS23240;Dbxref=GenBank:WP_094912470.1;Name=WP_094912470.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462799.1;locus_tag=CCO47_RS23240;product=HTH-type transcriptional activator IlvY;protein_id=WP_094912470.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4776549 4776890 . - . ID=gene-CCO47_RS23245;Name=CCO47_RS23245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23245;old_locus_tag=CCO47_23245 NZ_CP075113.1 Protein Homology CDS 4776549 4776890 . - 0 ID=cds-WP_000560824.1;Parent=gene-CCO47_RS23245;Dbxref=GenBank:WP_000560824.1;Name=WP_000560824.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462798.1;locus_tag=CCO47_RS23245;product=helix-turn-helix domain-containing protein;protein_id=WP_000560824.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4776887 4777204 . - . ID=gene-CCO47_RS23250;Name=CCO47_RS23250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23250;old_locus_tag=CCO47_23250 NZ_CP075113.1 Protein Homology CDS 4776887 4777204 . - 0 ID=cds-WP_000535852.1;Parent=gene-CCO47_RS23250;Dbxref=GenBank:WP_000535852.1;Name=WP_000535852.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462797.1;locus_tag=CCO47_RS23250;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000535852.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4777487 4779031 . - . ID=gene-CCO47_RS23255;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=CCO47_RS23255;old_locus_tag=CCO47_23255 NZ_CP075113.1 Protein Homology CDS 4777487 4779031 . - 0 ID=cds-WP_001675535.1;Parent=gene-CCO47_RS23255;Dbxref=GenBank:WP_001675535.1;Name=WP_001675535.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462796.1;locus_tag=CCO47_RS23255;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_001675535.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4779034 4780884 . - . ID=gene-CCO47_RS23260;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=CCO47_RS23260;old_locus_tag=CCO47_23260 NZ_CP075113.1 Protein Homology CDS 4779034 4780884 . - 0 ID=cds-WP_001127431.1;Parent=gene-CCO47_RS23260;Dbxref=GenBank:WP_001127431.1;Name=WP_001127431.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=CCO47_RS23260;product=dihydroxy-acid dehydratase;protein_id=WP_001127431.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4781044 4781973 . - . ID=gene-CCO47_RS23265;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=CCO47_RS23265;old_locus_tag=CCO47_23265 NZ_CP075113.1 Protein Homology CDS 4781044 4781973 . - 0 ID=cds-WP_000208532.1;Parent=gene-CCO47_RS23265;Dbxref=GenBank:WP_000208532.1;Name=WP_000208532.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462794.1;locus_tag=CCO47_RS23265;product=branched-chain-amino-acid transaminase;protein_id=WP_000208532.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4781991 4782254 . - . ID=gene-CCO47_RS23270;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=CCO47_RS23270;old_locus_tag=CCO47_23270 NZ_CP075113.1 Protein Homology CDS 4781991 4782254 . - 0 ID=cds-WP_000983260.1;Parent=gene-CCO47_RS23270;Dbxref=GenBank:WP_000983260.1;Name=WP_000983260.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=CCO47_RS23270;product=acetolactate synthase 2 small subunit;protein_id=WP_000983260.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4782251 4783897 . - . ID=gene-CCO47_RS23275;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=CCO47_RS23275;old_locus_tag=CCO47_23275 NZ_CP075113.1 Protein Homology CDS 4782251 4783897 . - 0 ID=cds-WP_001012569.1;Parent=gene-CCO47_RS23275;Dbxref=GenBank:WP_001012569.1;Name=WP_001012569.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=CCO47_RS23275;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_001012569.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4783900 4783950 . - . ID=gene-CCO47_RS23280;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=CCO47_RS23280;old_locus_tag=CCO47_23280 NZ_CP075113.1 Protein Homology CDS 4783900 4783950 . - 0 ID=cds-WP_192930503.1;Parent=gene-CCO47_RS23280;Dbxref=GenBank:WP_192930503.1;Name=WP_192930503.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791259.1;locus_tag=CCO47_RS23280;product=peptide IlvX;protein_id=WP_192930503.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4784037 4784135 . - . ID=gene-CCO47_RS23285;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=CCO47_RS23285;old_locus_tag=CCO47_23285 NZ_CP075113.1 Protein Homology CDS 4784037 4784135 . - 0 ID=cds-WP_001311244.1;Parent=gene-CCO47_RS23285;Dbxref=GenBank:WP_001311244.1;Name=WP_001311244.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=CCO47_RS23285;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4784487 4786008 . + . ID=gene-CCO47_RS23290;Name=CCO47_RS23290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS23290;old_locus_tag=CCO47_23290;pseudo=true NZ_CP075113.1 Protein Homology CDS 4784487 4786008 . + 0 ID=cds-CCO47_RS23290;Parent=gene-CCO47_RS23290;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=CCO47_RS23290;product=YifB family Mg chelatase-like AAA ATPase;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 4786033 4786371 . - . ID=gene-CCO47_RS23295;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=CCO47_RS23295;old_locus_tag=CCO47_23295 NZ_CP075113.1 Protein Homology CDS 4786033 4786371 . - 0 ID=cds-WP_000840996.1;Parent=gene-CCO47_RS23295;Dbxref=GenBank:WP_000840996.1;Name=WP_000840996.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462789.1;locus_tag=CCO47_RS23295;product=macrodomain Ori organization protein MaoP;protein_id=WP_000840996.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4786478 4787326 . + . ID=gene-CCO47_RS23300;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=CCO47_RS23300;old_locus_tag=CCO47_23300 NZ_CP075113.1 Protein Homology CDS 4786478 4787326 . + 0 ID=cds-WP_094912468.1;Parent=gene-CCO47_RS23300;Dbxref=GenBank:WP_094912468.1;Name=WP_094912468.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=CCO47_RS23300;product=HTH-type transcriptional regulator HdfR;protein_id=WP_094912468.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4787428 4787503 . - . ID=gene-CCO47_RS23305;Name=CCO47_RS23305;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS23305;old_locus_tag=CCO47_23305 NZ_CP075113.1 tRNAscan-SE tRNA 4787428 4787503 . - . ID=rna-CCO47_RS23305;Parent=gene-CCO47_RS23305;anticodon=(pos:complement(4787468..4787470));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS23305;product=tRNA-Trp NZ_CP075113.1 tRNAscan-SE exon 4787428 4787503 . - . ID=exon-CCO47_RS23305-1;Parent=rna-CCO47_RS23305;anticodon=(pos:complement(4787468..4787470));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS23305;product=tRNA-Trp NZ_CP075113.1 RefSeq gene 4787512 4787588 . - . ID=gene-CCO47_RS23310;Name=CCO47_RS23310;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS23310;old_locus_tag=CCO47_23310 NZ_CP075113.1 tRNAscan-SE tRNA 4787512 4787588 . - . ID=rna-CCO47_RS23310;Parent=gene-CCO47_RS23310;anticodon=(pos:complement(4787552..4787554));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS23310;product=tRNA-Asp NZ_CP075113.1 tRNAscan-SE exon 4787512 4787588 . - . ID=exon-CCO47_RS23310-1;Parent=rna-CCO47_RS23310;anticodon=(pos:complement(4787552..4787554));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS23310;product=tRNA-Asp NZ_CP075113.1 RefSeq gene 4787643 4787758 . - . ID=gene-CCO47_RS23315;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO47_RS23315;old_locus_tag=CCO47_23315 NZ_CP075113.1 cmsearch rRNA 4787643 4787758 . - . ID=rna-CCO47_RS23315;Parent=gene-CCO47_RS23315;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS23315;product=5S ribosomal RNA NZ_CP075113.1 cmsearch exon 4787643 4787758 . - . ID=exon-CCO47_RS23315-1;Parent=rna-CCO47_RS23315;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS23315;product=5S ribosomal RNA NZ_CP075113.1 RefSeq gene 4787955 4790862 . - . ID=gene-CCO47_RS23320;Name=CCO47_RS23320;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO47_RS23320;old_locus_tag=CCO47_23320 NZ_CP075113.1 cmsearch rRNA 4787955 4790862 . - . ID=rna-CCO47_RS23320;Parent=gene-CCO47_RS23320;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS23320;product=23S ribosomal RNA NZ_CP075113.1 cmsearch exon 4787955 4790862 . - . ID=exon-CCO47_RS23320-1;Parent=rna-CCO47_RS23320;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS23320;product=23S ribosomal RNA NZ_CP075113.1 RefSeq gene 4791056 4791131 . - . ID=gene-CCO47_RS23325;Name=CCO47_RS23325;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO47_RS23325;old_locus_tag=CCO47_23325 NZ_CP075113.1 tRNAscan-SE tRNA 4791056 4791131 . - . ID=rna-CCO47_RS23325;Parent=gene-CCO47_RS23325;anticodon=(pos:complement(4791095..4791097));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS23325;product=tRNA-Glu NZ_CP075113.1 tRNAscan-SE exon 4791056 4791131 . - . ID=exon-CCO47_RS23325-1;Parent=rna-CCO47_RS23325;anticodon=(pos:complement(4791095..4791097));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO47_RS23325;product=tRNA-Glu NZ_CP075113.1 RefSeq gene 4791217 4792758 . - . ID=gene-CCO47_RS23330;Name=CCO47_RS23330;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO47_RS23330;old_locus_tag=CCO47_23330 NZ_CP075113.1 cmsearch rRNA 4791217 4792758 . - . ID=rna-CCO47_RS23330;Parent=gene-CCO47_RS23330;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS23330;product=16S ribosomal RNA NZ_CP075113.1 cmsearch exon 4791217 4792758 . - . ID=exon-CCO47_RS23330-1;Parent=rna-CCO47_RS23330;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO47_RS23330;product=16S ribosomal RNA NZ_CP075113.1 RefSeq gene 4793239 4793943 . + . ID=gene-CCO47_RS23335;Name=CCO47_RS23335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23335;old_locus_tag=CCO47_23335 NZ_CP075113.1 Protein Homology CDS 4793239 4793943 . + 0 ID=cds-WP_001131148.1;Parent=gene-CCO47_RS23335;Dbxref=GenBank:WP_001131148.1;Name=WP_001131148.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462787.1;locus_tag=CCO47_RS23335;product=FadR/GntR family transcriptional regulator;protein_id=WP_001131148.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4793955 4795382 . + . ID=gene-CCO47_RS23340;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=CCO47_RS23340;old_locus_tag=CCO47_23340 NZ_CP075113.1 Protein Homology CDS 4793955 4795382 . + 0 ID=cds-WP_000202071.1;Parent=gene-CCO47_RS23340;Dbxref=GenBank:WP_000202071.1;Name=WP_000202071.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462786.1;locus_tag=CCO47_RS23340;product=multidrug transporter subunit MdtD;protein_id=WP_000202071.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4795348 4796346 . - . ID=gene-CCO47_RS23345;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=CCO47_RS23345;old_locus_tag=CCO47_23345 NZ_CP075113.1 Protein Homology CDS 4795348 4796346 . - 0 ID=cds-WP_000224487.1;Parent=gene-CCO47_RS23345;Dbxref=GenBank:WP_000224487.1;Name=WP_000224487.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462785.1;locus_tag=CCO47_RS23345;product=ribose operon transcriptional repressor RbsR;protein_id=WP_000224487.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4796350 4797279 . - . ID=gene-CCO47_RS23350;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=CCO47_RS23350;old_locus_tag=CCO47_23350 NZ_CP075113.1 Protein Homology CDS 4796350 4797279 . - 0 ID=cds-WP_000844728.1;Parent=gene-CCO47_RS23350;Dbxref=GenBank:WP_000844728.1;Name=WP_000844728.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462784.1;locus_tag=CCO47_RS23350;product=ribokinase;protein_id=WP_000844728.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4797412 4798302 . - . ID=gene-CCO47_RS23355;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=CCO47_RS23355;old_locus_tag=CCO47_23355 NZ_CP075113.1 Protein Homology CDS 4797412 4798302 . - 0 ID=cds-WP_001056263.1;Parent=gene-CCO47_RS23355;Dbxref=GenBank:WP_001056263.1;Name=WP_001056263.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462783.1;locus_tag=CCO47_RS23355;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_001056263.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4798327 4799292 . - . ID=gene-CCO47_RS23360;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=CCO47_RS23360;old_locus_tag=CCO47_23360 NZ_CP075113.1 Protein Homology CDS 4798327 4799292 . - 0 ID=cds-WP_000211345.1;Parent=gene-CCO47_RS23360;Dbxref=GenBank:WP_000211345.1;Name=WP_000211345.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=CCO47_RS23360;product=ribose ABC transporter permease;protein_id=WP_000211345.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4799298 4800803 . - . ID=gene-CCO47_RS23365;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=CCO47_RS23365;old_locus_tag=CCO47_23365 NZ_CP075113.1 Protein Homology CDS 4799298 4800803 . - 0 ID=cds-WP_000339359.1;Parent=gene-CCO47_RS23365;Dbxref=GenBank:WP_000339359.1;Name=WP_000339359.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462781.1;locus_tag=CCO47_RS23365;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_000339359.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4800811 4801230 . - . ID=gene-CCO47_RS23370;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=CCO47_RS23370;old_locus_tag=CCO47_23370 NZ_CP075113.1 Protein Homology CDS 4800811 4801230 . - 0 ID=cds-WP_000715944.1;Parent=gene-CCO47_RS23370;Dbxref=GenBank:WP_000715944.1;Name=WP_000715944.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462780.1;locus_tag=CCO47_RS23370;product=D-ribose pyranase;protein_id=WP_000715944.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4801447 4803315 . - . ID=gene-CCO47_RS23375;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=CCO47_RS23375;old_locus_tag=CCO47_23375 NZ_CP075113.1 Protein Homology CDS 4801447 4803315 . - 0 ID=cds-WP_000102338.1;Parent=gene-CCO47_RS23375;Dbxref=GenBank:WP_000102338.1;Name=WP_000102338.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=CCO47_RS23375;product=low affinity potassium transporter Kup;protein_id=WP_000102338.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4803663 4805159 . + . ID=gene-CCO47_RS23380;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=CCO47_RS23380;old_locus_tag=CCO47_23380 NZ_CP075113.1 Protein Homology CDS 4803663 4805159 . + 0 ID=cds-WP_000940987.1;Parent=gene-CCO47_RS23380;Dbxref=GenBank:WP_000940987.1;Name=WP_000940987.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462778.1;locus_tag=CCO47_RS23380;product=ATPase RavA;protein_id=WP_000940987.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4805153 4806604 . + . ID=gene-CCO47_RS23385;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=CCO47_RS23385;old_locus_tag=CCO47_23385 NZ_CP075113.1 Protein Homology CDS 4805153 4806604 . + 0 ID=cds-WP_000956588.1;Parent=gene-CCO47_RS23385;Dbxref=GenBank:WP_000956588.1;Name=WP_000956588.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=CCO47_RS23385;product=ATPase RavA stimulator ViaA;protein_id=WP_000956588.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4806609 4807601 . - . ID=gene-CCO47_RS23390;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=CCO47_RS23390;old_locus_tag=CCO47_23390 NZ_CP075113.1 Protein Homology CDS 4806609 4807601 . - 0 ID=cds-WP_000845123.1;Parent=gene-CCO47_RS23390;Dbxref=GenBank:WP_000845123.1;Name=WP_000845123.1;Ontology_term=GO:0070981,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=L-asparagine biosynthetic process|0070981||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=CCO47_RS23390;product=aspartate--ammonia ligase;protein_id=WP_000845123.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4807752 4808210 . + . ID=gene-CCO47_RS23395;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=CCO47_RS23395;old_locus_tag=CCO47_23395 NZ_CP075113.1 Protein Homology CDS 4807752 4808210 . + 0 ID=cds-WP_000433016.1;Parent=gene-CCO47_RS23395;Dbxref=GenBank:WP_000433016.1;Name=WP_000433016.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462775.1;locus_tag=CCO47_RS23395;product=transcriptional regulator AsnC;protein_id=WP_000433016.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4808300 4808743 . + . ID=gene-CCO47_RS23400;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=CCO47_RS23400;old_locus_tag=CCO47_23400 NZ_CP075113.1 Protein Homology CDS 4808300 4808743 . + 0 ID=cds-WP_000763720.1;Parent=gene-CCO47_RS23400;Dbxref=GenBank:WP_000763720.1;Name=WP_000763720.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462774.1;locus_tag=CCO47_RS23400;product=FMN-binding protein MioC;protein_id=WP_000763720.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4809122 4811011 . + . ID=gene-CCO47_RS23405;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=CCO47_RS23405;old_locus_tag=CCO47_23405 NZ_CP075113.1 Protein Homology CDS 4809122 4811011 . + 0 ID=cds-WP_000499875.1;Parent=gene-CCO47_RS23405;Dbxref=GenBank:WP_000499875.1;Name=WP_000499875.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=CCO47_RS23405;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_000499875.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4811114 4811737 . + . ID=gene-CCO47_RS23410;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=CCO47_RS23410;old_locus_tag=CCO47_23410 NZ_CP075113.1 Protein Homology CDS 4811114 4811737 . + 0 ID=cds-WP_001519938.1;Parent=gene-CCO47_RS23410;Dbxref=GenBank:WP_001519938.1;Name=WP_001519938.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462772.3;locus_tag=CCO47_RS23410;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_001519938.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4812352 4812732 . + . ID=gene-CCO47_RS23415;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=CCO47_RS23415;old_locus_tag=CCO47_23415 NZ_CP075113.1 Protein Homology CDS 4812352 4812732 . + 0 ID=cds-WP_000116686.1;Parent=gene-CCO47_RS23415;Dbxref=GenBank:WP_000116686.1;Name=WP_000116686.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462771.1;locus_tag=CCO47_RS23415;product=F0F1 ATP synthase subunit I;protein_id=WP_000116686.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4812741 4813556 . + . ID=gene-CCO47_RS23420;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=CCO47_RS23420;old_locus_tag=CCO47_23420 NZ_CP075113.1 Protein Homology CDS 4812741 4813556 . + 0 ID=cds-WP_000135632.1;Parent=gene-CCO47_RS23420;Dbxref=GenBank:WP_000135632.1;Name=WP_000135632.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=CCO47_RS23420;product=F0F1 ATP synthase subunit A;protein_id=WP_000135632.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4813603 4813842 . + . ID=gene-CCO47_RS23425;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=CCO47_RS23425;old_locus_tag=CCO47_23425 NZ_CP075113.1 Protein Homology CDS 4813603 4813842 . + 0 ID=cds-WP_000429386.1;Parent=gene-CCO47_RS23425;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=CCO47_RS23425;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4813902 4814372 . + . ID=gene-CCO47_RS23430;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=CCO47_RS23430;old_locus_tag=CCO47_23430 NZ_CP075113.1 Protein Homology CDS 4813902 4814372 . + 0 ID=cds-WP_001052212.1;Parent=gene-CCO47_RS23430;Dbxref=GenBank:WP_001052212.1;Name=WP_001052212.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=CCO47_RS23430;product=F0F1 ATP synthase subunit B;protein_id=WP_001052212.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4814387 4814920 . + . ID=gene-CCO47_RS23435;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=CCO47_RS23435;old_locus_tag=CCO47_23435 NZ_CP075113.1 Protein Homology CDS 4814387 4814920 . + 0 ID=cds-WP_001288957.1;Parent=gene-CCO47_RS23435;Dbxref=GenBank:WP_001288957.1;Name=WP_001288957.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=CCO47_RS23435;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288957.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4814933 4816474 . + . ID=gene-CCO47_RS23440;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=CCO47_RS23440;old_locus_tag=CCO47_23440 NZ_CP075113.1 Protein Homology CDS 4814933 4816474 . + 0 ID=cds-WP_001176751.1;Parent=gene-CCO47_RS23440;Dbxref=GenBank:WP_001176751.1;Name=WP_001176751.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=CCO47_RS23440;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176751.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4816525 4817388 . + . ID=gene-CCO47_RS23445;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=CCO47_RS23445;old_locus_tag=CCO47_23445 NZ_CP075113.1 Protein Homology CDS 4816525 4817388 . + 0 ID=cds-WP_000896506.1;Parent=gene-CCO47_RS23445;Dbxref=GenBank:WP_000896506.1;Name=WP_000896506.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=CCO47_RS23445;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000896506.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4817415 4818797 . + . ID=gene-CCO47_RS23450;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=CCO47_RS23450;old_locus_tag=CCO47_23450 NZ_CP075113.1 Protein Homology CDS 4817415 4818797 . + 0 ID=cds-WP_000190499.1;Parent=gene-CCO47_RS23450;Dbxref=GenBank:WP_000190499.1;Name=WP_000190499.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=CCO47_RS23450;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190499.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4818818 4819237 . + . ID=gene-CCO47_RS23455;Name=CCO47_RS23455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23455;old_locus_tag=CCO47_23455 NZ_CP075113.1 Protein Homology CDS 4818818 4819237 . + 0 ID=cds-WP_001251971.1;Parent=gene-CCO47_RS23455;Dbxref=GenBank:WP_001251971.1;Name=WP_001251971.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=CCO47_RS23455;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251971.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4819467 4820165 . + . ID=gene-CCO47_RS23460;Name=CCO47_RS23460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23460;old_locus_tag=CCO47_23460 NZ_CP075113.1 Protein Homology CDS 4819467 4820165 . + 0 ID=cds-WP_000009905.1;Parent=gene-CCO47_RS23460;Dbxref=GenBank:WP_000009905.1;Name=WP_000009905.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462762.1;locus_tag=CCO47_RS23460;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000009905.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4820485 4821855 . + . ID=gene-CCO47_RS23465;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=CCO47_RS23465;old_locus_tag=CCO47_23465 NZ_CP075113.1 Protein Homology CDS 4820485 4821855 . + 0 ID=cds-WP_000934851.1;Parent=gene-CCO47_RS23465;Dbxref=GenBank:WP_000934851.1;Name=WP_000934851.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462761.1;locus_tag=CCO47_RS23465;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000934851.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4822044 4823873 . + . ID=gene-CCO47_RS23470;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=CCO47_RS23470;old_locus_tag=CCO47_23470 NZ_CP075113.1 Protein Homology CDS 4822044 4823873 . + 0 ID=cds-WP_000334052.1;Parent=gene-CCO47_RS23470;Dbxref=GenBank:WP_000334052.1;Name=WP_000334052.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=CCO47_RS23470;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_000334052.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4824024 4825781 . - . ID=gene-CCO47_RS23475;Name=CCO47_RS23475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23475;old_locus_tag=CCO47_23475 NZ_CP075113.1 Protein Homology CDS 4824024 4825781 . - 0 ID=cds-WP_000213166.1;Parent=gene-CCO47_RS23475;Dbxref=GenBank:WP_000213166.1;Name=WP_000213166.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462759.1;locus_tag=CCO47_RS23475;product=SgrR family transcriptional regulator;protein_id=WP_000213166.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4825876 4826694 . + . ID=gene-CCO47_RS23480;Name=CCO47_RS23480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23480;old_locus_tag=CCO47_23480 NZ_CP075113.1 Protein Homology CDS 4825876 4826694 . + 0 ID=cds-WP_000166716.1;Parent=gene-CCO47_RS23480;Dbxref=GenBank:WP_000166716.1;Name=WP_000166716.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462758.1;locus_tag=CCO47_RS23480;product=shikimate 5-dehydrogenase;protein_id=WP_000166716.1;transl_table=11 NZ_CP075113.1 RefSeq pseudogene 4826743 4828115 . + . ID=gene-CCO47_RS23485;Name=CCO47_RS23485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS23485;old_locus_tag=CCO47_23485;pseudo=true NZ_CP075113.1 Protein Homology CDS 4826743 4828115 . + 0 ID=cds-CCO47_RS23485;Parent=gene-CCO47_RS23485;Note=frameshifted;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=CCO47_RS23485;product=fructose-specific PTS transporter subunit EIIC;pseudo=true;transl_table=11 NZ_CP075113.1 RefSeq gene 4828281 4829321 . + . ID=gene-CCO47_RS23490;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=CCO47_RS23490;old_locus_tag=CCO47_23490 NZ_CP075113.1 Protein Homology CDS 4828281 4829321 . + 0 ID=cds-WP_000867130.1;Parent=gene-CCO47_RS23490;Dbxref=GenBank:WP_000867130.1;Name=WP_000867130.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=CCO47_RS23490;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867130.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4829457 4830416 . + . ID=gene-CCO47_RS23495;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=CCO47_RS23495;old_locus_tag=CCO47_23495 NZ_CP075113.1 Protein Homology CDS 4829457 4830416 . + 0 ID=cds-WP_000741630.1;Parent=gene-CCO47_RS23495;Dbxref=GenBank:WP_000741630.1;Name=WP_000741630.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=CCO47_RS23495;product=phosphate ABC transporter permease PstC;protein_id=WP_000741630.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4830416 4831306 . + . ID=gene-CCO47_RS23500;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=CCO47_RS23500;old_locus_tag=CCO47_23500 NZ_CP075113.1 Protein Homology CDS 4830416 4831306 . + 0 ID=cds-WP_000212197.1;Parent=gene-CCO47_RS23500;Dbxref=GenBank:WP_000212197.1;Name=WP_000212197.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462754.1;locus_tag=CCO47_RS23500;product=phosphate ABC transporter permease PstA;protein_id=WP_000212197.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4831393 4832166 . + . ID=gene-CCO47_RS23505;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=CCO47_RS23505;old_locus_tag=CCO47_23505 NZ_CP075113.1 Protein Homology CDS 4831393 4832166 . + 0 ID=cds-WP_000063118.1;Parent=gene-CCO47_RS23505;Dbxref=GenBank:WP_000063118.1;Name=WP_000063118.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=CCO47_RS23505;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063118.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4832181 4832906 . + . ID=gene-CCO47_RS23510;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=CCO47_RS23510;old_locus_tag=CCO47_23510 NZ_CP075113.1 Protein Homology CDS 4832181 4832906 . + 0 ID=cds-WP_000377800.1;Parent=gene-CCO47_RS23510;Dbxref=GenBank:WP_000377800.1;Name=WP_000377800.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462752.1;locus_tag=CCO47_RS23510;product=phosphate signaling complex protein PhoU;protein_id=WP_000377800.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4833001 4833666 . - . ID=gene-CCO47_RS23515;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=CCO47_RS23515;old_locus_tag=CCO47_23515 NZ_CP075113.1 Protein Homology CDS 4833001 4833666 . - 0 ID=cds-WP_000078082.1;Parent=gene-CCO47_RS23515;Dbxref=GenBank:WP_000078082.1;Name=WP_000078082.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462751.1;locus_tag=CCO47_RS23515;product=6-phosphogluconate phosphatase;protein_id=WP_000078082.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4833835 4835172 . + . ID=gene-CCO47_RS23520;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=CCO47_RS23520;old_locus_tag=CCO47_23520 NZ_CP075113.1 Protein Homology CDS 4833835 4835172 . + 0 ID=cds-WP_001675586.1;Parent=gene-CCO47_RS23520;Dbxref=GenBank:WP_001675586.1;Name=WP_001675586.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=CCO47_RS23520;product=adenine permease AdeP;protein_id=WP_001675586.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4835217 4835801 . - . ID=gene-CCO47_RS23525;Name=CCO47_RS23525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23525;old_locus_tag=CCO47_23525 NZ_CP075113.1 Protein Homology CDS 4835217 4835801 . - 0 ID=cds-WP_001575173.1;Parent=gene-CCO47_RS23525;Dbxref=GenBank:WP_001575173.1;Name=WP_001575173.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462749.3;locus_tag=CCO47_RS23525;product=NADPH-dependent FMN reductase;protein_id=WP_001575173.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4835801 4836556 . - . ID=gene-CCO47_RS23530;Name=CCO47_RS23530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23530;old_locus_tag=CCO47_23530 NZ_CP075113.1 Protein Homology CDS 4835801 4836556 . - 0 ID=cds-WP_000190678.1;Parent=gene-CCO47_RS23530;Dbxref=GenBank:WP_000190678.1;Name=WP_000190678.1;Ontology_term=GO:0008897;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462748.1;locus_tag=CCO47_RS23530;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_000190678.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4836714 4837673 . - . ID=gene-CCO47_RS23535;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=CCO47_RS23535;old_locus_tag=CCO47_23535 NZ_CP075113.1 Protein Homology CDS 4836714 4837673 . - 0 ID=cds-WP_000749365.1;Parent=gene-CCO47_RS23535;Dbxref=GenBank:WP_000749365.1;Name=WP_000749365.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=CCO47_RS23535;product=HTH-type transcriptional regulator YidZ;protein_id=WP_000749365.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4837642 4838829 . - . ID=gene-CCO47_RS23540;Name=CCO47_RS23540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23540;old_locus_tag=CCO47_23540 NZ_CP075113.1 Protein Homology CDS 4837642 4838829 . - 0 ID=cds-WP_000819602.1;Parent=gene-CCO47_RS23540;Dbxref=GenBank:WP_000819602.1;Name=WP_000819602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462746.1;locus_tag=CCO47_RS23540;product=MFS transporter;protein_id=WP_000819602.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4839012 4840376 . - . ID=gene-CCO47_RS23545;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=CCO47_RS23545;old_locus_tag=CCO47_23545 NZ_CP075113.1 Protein Homology CDS 4839012 4840376 . - 0 ID=cds-WP_000019081.1;Parent=gene-CCO47_RS23545;Dbxref=GenBank:WP_000019081.1;Name=WP_000019081.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=CCO47_RS23545;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_000019081.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4840517 4842163 . - . ID=gene-CCO47_RS23550;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=CCO47_RS23550;old_locus_tag=CCO47_23550 NZ_CP075113.1 Protein Homology CDS 4840517 4842163 . - 0 ID=cds-WP_000378284.1;Parent=gene-CCO47_RS23550;Dbxref=GenBank:WP_000378284.1;Name=WP_000378284.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=CCO47_RS23550;product=membrane protein insertase YidC;protein_id=WP_000378284.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4842166 4842423 . - . ID=gene-CCO47_RS23555;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=CCO47_RS23555;old_locus_tag=CCO47_23555 NZ_CP075113.1 Protein Homology CDS 4842166 4842423 . - 0 ID=cds-WP_001307474.1;Parent=gene-CCO47_RS23555;Dbxref=GenBank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=CCO47_RS23555;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4842387 4842746 . - . ID=gene-CCO47_RS23560;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=CCO47_RS23560;old_locus_tag=CCO47_23560 NZ_CP075113.1 Protein Homology CDS 4842387 4842746 . - 0 ID=cds-WP_000239725.1;Parent=gene-CCO47_RS23560;Dbxref=GenBank:WP_000239725.1;Name=WP_000239725.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=CCO47_RS23560;product=ribonuclease P protein component;protein_id=WP_000239725.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4842763 4842903 . - . ID=gene-CCO47_RS23565;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=CCO47_RS23565;old_locus_tag=CCO47_23565 NZ_CP075113.1 Protein Homology CDS 4842763 4842903 . - 0 ID=cds-WP_000831330.1;Parent=gene-CCO47_RS23565;Dbxref=GenBank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=CCO47_RS23565;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 NZ_CP075113.1 RefSeq gene 4843132 4843224 . - . ID=gene-CCO47_RS24585;Name=CCO47_RS24585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24585 NZ_CP075113.1 Protein Homology CDS 4843132 4843224 . - 0 ID=cds-WP_418142141.1;Parent=gene-CCO47_RS24585;Dbxref=GenBank:WP_418142141.1;Name=WP_418142141.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048187.2;locus_tag=CCO47_RS24585;product=hypothetical protein;protein_id=WP_418142141.1;transl_table=11 ##sequence-region NZ_CP075114.1 1 74688 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=98360 NZ_CP075114.1 RefSeq region 1 74688 . + . ID=NZ_CP075114.1:1..74688;Dbxref=taxon:98360;Is_circular=true;Name=pCFSAN059898;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=plasmid;isolation-source=cattle stool;mol_type=genomic DNA;nat-host=Bos taurus;plasmid-name=pCFSAN059898;serovar=Dublin;strain=CFSAN059898;sub-species=enterica NZ_CP075114.1 RefSeq gene 1 330 . + . ID=gene-CCO47_RS23570;Name=CCO47_RS23570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23570;old_locus_tag=CCO47_23570 NZ_CP075114.1 Protein Homology CDS 1 330 . + 0 ID=cds-WP_000866650.1;Parent=gene-CCO47_RS23570;Dbxref=GenBank:WP_000866650.1;Name=WP_000866650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000866645.1;locus_tag=CCO47_RS23570;product=hypothetical protein;protein_id=WP_000866650.1;transl_table=11 NZ_CP075114.1 RefSeq gene 373 552 . + . ID=gene-CCO47_RS23575;Name=CCO47_RS23575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23575;old_locus_tag=CCO47_23575 NZ_CP075114.1 Protein Homology CDS 373 552 . + 0 ID=cds-WP_001575529.1;Parent=gene-CCO47_RS23575;Dbxref=GenBank:WP_001575529.1;Name=WP_001575529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000439078.1;locus_tag=CCO47_RS23575;product=hypothetical protein;protein_id=WP_001575529.1;transl_table=11 NZ_CP075114.1 RefSeq gene 622 771 . + . ID=gene-CCO47_RS23580;Name=CCO47_RS23580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23580;old_locus_tag=CCO47_23580 NZ_CP075114.1 Protein Homology CDS 622 771 . + 0 ID=cds-WP_000003880.1;Parent=gene-CCO47_RS23580;Dbxref=GenBank:WP_000003880.1;Name=WP_000003880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000003880.1;locus_tag=CCO47_RS23580;product=hypothetical protein;protein_id=WP_000003880.1;transl_table=11 NZ_CP075114.1 RefSeq gene 784 1056 . + . ID=gene-CCO47_RS23585;Name=CCO47_RS23585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23585;old_locus_tag=CCO47_23585 NZ_CP075114.1 Protein Homology CDS 784 1056 . + 0 ID=cds-WP_000160399.1;Parent=gene-CCO47_RS23585;Dbxref=GenBank:WP_000160399.1;Name=WP_000160399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001547192.1;locus_tag=CCO47_RS23585;product=hypothetical protein;protein_id=WP_000160399.1;transl_table=11 NZ_CP075114.1 RefSeq gene 1382 1927 . + . ID=gene-CCO47_RS23595;Name=ddp1;gbkey=Gene;gene=ddp1;gene_biotype=protein_coding;locus_tag=CCO47_RS23595;old_locus_tag=CCO47_23595 NZ_CP075114.1 Protein Homology CDS 1382 1927 . + 0 ID=cds-WP_000757691.1;Parent=gene-CCO47_RS23595;Dbxref=GenBank:WP_000757691.1;Name=WP_000757691.1;gbkey=CDS;gene=ddp1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000757693.1;locus_tag=CCO47_RS23595;product=DNA distortion polypeptide 1;protein_id=WP_000757691.1;transl_table=11 NZ_CP075114.1 RefSeq gene 1930 3111 . + . ID=gene-CCO47_RS23600;Name=mobP1;gbkey=Gene;gene=mobP1;gene_biotype=protein_coding;locus_tag=CCO47_RS23600;old_locus_tag=CCO47_23600 NZ_CP075114.1 Protein Homology CDS 1930 3111 . + 0 ID=cds-WP_125831865.1;Parent=gene-CCO47_RS23600;Dbxref=GenBank:WP_125831865.1;Name=WP_125831865.1;gbkey=CDS;gene=mobP1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000539536.1;locus_tag=CCO47_RS23600;product=MobP1 family relaxase;protein_id=WP_125831865.1;transl_table=11 NZ_CP075114.1 RefSeq gene 3457 3975 . + . ID=gene-CCO47_RS23605;Name=CCO47_RS23605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23605;old_locus_tag=CCO47_23605 NZ_CP075114.1 Protein Homology CDS 3457 3975 . + 0 ID=cds-WP_001675951.1;Parent=gene-CCO47_RS23605;Dbxref=GenBank:WP_001675951.1;Name=WP_001675951.1;Ontology_term=GO:0006354,GO:0006355,GO:0140673;gbkey=CDS;go_process=DNA-templated transcription elongation|0006354||IEA,regulation of DNA-templated transcription|0006355||IEA,transcription elongation-coupled chromatin remodeling|0140673||IEA;inference=COORDINATES: protein motif:HMM:NF014417.7;locus_tag=CCO47_RS23605;product=transcription termination/antitermination NusG family protein;protein_id=WP_001675951.1;transl_table=11 NZ_CP075114.1 RefSeq gene 3905 4117 . + . ID=gene-CCO47_RS23610;Name=CCO47_RS23610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23610;old_locus_tag=CCO47_23610 NZ_CP075114.1 Protein Homology CDS 3905 4117 . + 0 ID=cds-WP_000125172.1;Parent=gene-CCO47_RS23610;Dbxref=GenBank:WP_000125172.1;Name=WP_000125172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125172.1;locus_tag=CCO47_RS23610;product=hypothetical protein;protein_id=WP_000125172.1;transl_table=11 NZ_CP075114.1 RefSeq gene 4150 4797 . + . ID=gene-CCO47_RS23615;Name=CCO47_RS23615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23615;old_locus_tag=CCO47_23615 NZ_CP075114.1 Protein Homology CDS 4150 4797 . + 0 ID=cds-WP_000953526.1;Parent=gene-CCO47_RS23615;Dbxref=GenBank:WP_000953526.1;Name=WP_000953526.1;Ontology_term=GO:0043684;gbkey=CDS;go_component=type IV secretion system complex|0043684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000953524.1;locus_tag=CCO47_RS23615;product=lytic transglycosylase domain-containing protein;protein_id=WP_000953526.1;transl_table=11 NZ_CP075114.1 RefSeq gene 4775 5071 . + . ID=gene-CCO47_RS23620;Name=CCO47_RS23620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23620;old_locus_tag=CCO47_23620 NZ_CP075114.1 Protein Homology CDS 4775 5071 . + 0 ID=cds-WP_000916182.1;Parent=gene-CCO47_RS23620;Dbxref=GenBank:WP_000916182.1;Name=WP_000916182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000916185.1;locus_tag=CCO47_RS23620;product=TrbC/VirB2 family protein;protein_id=WP_000916182.1;transl_table=11 NZ_CP075114.1 RefSeq gene 5090 7843 . + . ID=gene-CCO47_RS23625;Name=CCO47_RS23625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23625;old_locus_tag=CCO47_23625 NZ_CP075114.1 Protein Homology CDS 5090 7843 . + 0 ID=cds-WP_001675613.1;Parent=gene-CCO47_RS23625;Dbxref=GenBank:WP_001675613.1;Name=WP_001675613.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016247738.1;locus_tag=CCO47_RS23625;product=VirB4 family type IV secretion/conjugal transfer ATPase;protein_id=WP_001675613.1;transl_table=11 NZ_CP075114.1 RefSeq gene 7854 8612 . + . ID=gene-CCO47_RS23630;Name=CCO47_RS23630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23630;old_locus_tag=CCO47_23630 NZ_CP075114.1 Protein Homology CDS 7854 8612 . + 0 ID=cds-WP_000744198.1;Parent=gene-CCO47_RS23630;Dbxref=GenBank:WP_000744198.1;Name=WP_000744198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000744203.1;locus_tag=CCO47_RS23630;product=type IV secretion system protein;protein_id=WP_000744198.1;transl_table=11 NZ_CP075114.1 RefSeq gene 8613 8840 . + . ID=gene-CCO47_RS23635;Name=CCO47_RS23635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23635;old_locus_tag=CCO47_23635 NZ_CP075114.1 Protein Homology CDS 8613 8840 . + 0 ID=cds-WP_000835348.1;Parent=gene-CCO47_RS23635;Dbxref=GenBank:WP_000835348.1;Name=WP_000835348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000835348.1;locus_tag=CCO47_RS23635;product=EexN family lipoprotein;protein_id=WP_000835348.1;transl_table=11 NZ_CP075114.1 RefSeq gene 8850 9983 . + . ID=gene-CCO47_RS23640;Name=CCO47_RS23640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23640;old_locus_tag=CCO47_23640 NZ_CP075114.1 Protein Homology CDS 8850 9983 . + 0 ID=cds-WP_000513456.1;Parent=gene-CCO47_RS23640;Dbxref=GenBank:WP_000513456.1;Name=WP_000513456.1;Ontology_term=GO:0030255;gbkey=CDS;go_process=protein secretion by the type IV secretion system|0030255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513453.1;locus_tag=CCO47_RS23640;product=TrbL/VirB6 family protein;protein_id=WP_000513456.1;transl_table=11 NZ_CP075114.1 RefSeq gene 10228 10941 . + . ID=gene-CCO47_RS23645;Name=CCO47_RS23645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23645;old_locus_tag=CCO47_23645 NZ_CP075114.1 Protein Homology CDS 10228 10941 . + 0 ID=cds-WP_000394613.1;Parent=gene-CCO47_RS23645;Dbxref=GenBank:WP_000394613.1;Name=WP_000394613.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016247737.1;locus_tag=CCO47_RS23645;product=VirB8 family type IV secretion system protein;protein_id=WP_000394613.1;transl_table=11 NZ_CP075114.1 RefSeq gene 10946 11875 . + . ID=gene-CCO47_RS23650;Name=CCO47_RS23650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23650;old_locus_tag=CCO47_23650 NZ_CP075114.1 Protein Homology CDS 10946 11875 . + 0 ID=cds-WP_000783377.1;Parent=gene-CCO47_RS23650;Dbxref=GenBank:WP_000783377.1;Name=WP_000783377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000783379.1;locus_tag=CCO47_RS23650;product=TrbG/VirB9 family P-type conjugative transfer protein;protein_id=WP_000783377.1;transl_table=11 NZ_CP075114.1 RefSeq gene 11872 13077 . + . ID=gene-CCO47_RS23655;Name=virB10;gbkey=Gene;gene=virB10;gene_biotype=protein_coding;locus_tag=CCO47_RS23655;old_locus_tag=CCO47_23655 NZ_CP075114.1 Protein Homology CDS 11872 13077 . + 0 ID=cds-WP_000139139.1;Parent=gene-CCO47_RS23655;Dbxref=GenBank:WP_000139139.1;Name=WP_000139139.1;gbkey=CDS;gene=virB10;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001378527.1;locus_tag=CCO47_RS23655;product=VirB10/TraB/TrbI family type IV secretion system protein;protein_id=WP_000139139.1;transl_table=11 NZ_CP075114.1 RefSeq pseudogene 13079 14109 . + . ID=gene-CCO47_RS23660;Name=virB11;gbkey=Gene;gene=virB11;gene_biotype=pseudogene;locus_tag=CCO47_RS23660;old_locus_tag=CCO47_23660;pseudo=true NZ_CP075114.1 Protein Homology CDS 13079 14109 . + 0 ID=cds-CCO47_RS23660;Parent=gene-CCO47_RS23660;Note=frameshifted;Ontology_term=GO:0044097,GO:0043684;gbkey=CDS;gene=virB11;go_component=type IV secretion system complex|0043684||IEA;go_process=secretion by the type IV secretion system|0044097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001058463.1;locus_tag=CCO47_RS23660;product=P-type DNA transfer ATPase VirB11;pseudo=true;transl_table=11 NZ_CP075114.1 RefSeq gene 14112 15947 . + . ID=gene-CCO47_RS23665;Name=CCO47_RS23665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23665;old_locus_tag=CCO47_23665 NZ_CP075114.1 Protein Homology CDS 14112 15947 . + 0 ID=cds-WP_000053823.1;Parent=gene-CCO47_RS23665;Dbxref=GenBank:WP_000053823.1;Name=WP_000053823.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053816.1;locus_tag=CCO47_RS23665;product=type IV secretory system conjugative DNA transfer family protein;protein_id=WP_000053823.1;transl_table=11 NZ_CP075114.1 RefSeq gene 15944 16357 . + . ID=gene-CCO47_RS23670;Name=CCO47_RS23670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23670;old_locus_tag=CCO47_23670 NZ_CP075114.1 Protein Homology CDS 15944 16357 . + 0 ID=cds-WP_001575522.1;Parent=gene-CCO47_RS23670;Dbxref=GenBank:WP_001575522.1;Name=WP_001575522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000722603.1;locus_tag=CCO47_RS23670;product=cag pathogenicity island Cag12 family protein;protein_id=WP_001575522.1;transl_table=11 NZ_CP075114.1 RefSeq gene 16354 16656 . + . ID=gene-CCO47_RS23675;Name=CCO47_RS23675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23675;old_locus_tag=CCO47_23675 NZ_CP075114.1 Protein Homology CDS 16354 16656 . + 0 ID=cds-WP_000717627.1;Parent=gene-CCO47_RS23675;Dbxref=GenBank:WP_000717627.1;Name=WP_000717627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000717624.1;locus_tag=CCO47_RS23675;product=TrbM/KikA/MpfK family conjugal transfer protein;protein_id=WP_000717627.1;transl_table=11 NZ_CP075114.1 RefSeq pseudogene 16817 16963 . + . ID=gene-CCO47_RS23680;Name=CCO47_RS23680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS23680;old_locus_tag=CCO47_23680;partial=true;pseudo=true;start_range=.,16817 NZ_CP075114.1 Protein Homology CDS 16817 16963 . + 0 ID=cds-CCO47_RS23680;Parent=gene-CCO47_RS23680;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517490.1;locus_tag=CCO47_RS23680;partial=true;product=AAA family ATPase;pseudo=true;start_range=.,16817;transl_table=11 NZ_CP075114.1 RefSeq gene 16967 17542 . + . ID=gene-CCO47_RS23685;Name=CCO47_RS23685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23685;old_locus_tag=CCO47_23685 NZ_CP075114.1 Protein Homology CDS 16967 17542 . + 0 ID=cds-WP_001198970.1;Parent=gene-CCO47_RS23685;Dbxref=GenBank:WP_001198970.1;Name=WP_001198970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012908955.1;locus_tag=CCO47_RS23685;product=hypothetical protein;protein_id=WP_001198970.1;transl_table=11 NZ_CP075114.1 RefSeq gene 17547 19700 . + . ID=gene-CCO47_RS23690;Name=CCO47_RS23690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23690;old_locus_tag=CCO47_23690 NZ_CP075114.1 Protein Homology CDS 17547 19700 . + 0 ID=cds-WP_001235752.1;Parent=gene-CCO47_RS23690;Dbxref=GenBank:WP_001235752.1;Name=WP_001235752.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0003917;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016247728.1;locus_tag=CCO47_RS23690;product=type IA DNA topoisomerase;protein_id=WP_001235752.1;transl_table=11 NZ_CP075114.1 RefSeq gene 19697 19903 . + . ID=gene-CCO47_RS23695;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=CCO47_RS23695;old_locus_tag=CCO47_23695 NZ_CP075114.1 Protein Homology CDS 19697 19903 . + 0 ID=cds-WP_000850859.1;Parent=gene-CCO47_RS23695;Dbxref=GenBank:WP_000850859.1;Name=WP_000850859.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000850858.1;locus_tag=CCO47_RS23695;product=hemolysin expression modulator Hha;protein_id=WP_000850859.1;transl_table=11 NZ_CP075114.1 RefSeq gene 19919 20353 . + . ID=gene-CCO47_RS23700;Name=CCO47_RS23700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23700;old_locus_tag=CCO47_23700 NZ_CP075114.1 Protein Homology CDS 19919 20353 . + 0 ID=cds-WP_001293135.1;Parent=gene-CCO47_RS23700;Dbxref=GenBank:WP_001293135.1;Name=WP_001293135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001293126.1;locus_tag=CCO47_RS23700;product=H-NS family histone-like protein;protein_id=WP_001293135.1;transl_table=11 NZ_CP075114.1 RefSeq gene 21016 21501 . + . ID=gene-CCO47_RS23705;Name=CCO47_RS23705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23705;old_locus_tag=CCO47_23705 NZ_CP075114.1 Protein Homology CDS 21016 21501 . + 0 ID=cds-WP_001281416.1;Parent=gene-CCO47_RS23705;Dbxref=GenBank:WP_001281416.1;Name=WP_001281416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001281416.1;locus_tag=CCO47_RS23705;product=Abi family protein;protein_id=WP_001281416.1;transl_table=11 NZ_CP075114.1 RefSeq gene 21660 22787 . - . ID=gene-CCO47_RS23710;Name=CCO47_RS23710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23710;old_locus_tag=CCO47_23710 NZ_CP075114.1 Protein Homology CDS 21660 22787 . - 0 ID=cds-WP_000156234.1;Parent=gene-CCO47_RS23710;Dbxref=GenBank:WP_000156234.1;Name=WP_000156234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000156234.1;locus_tag=CCO47_RS23710;product=hypothetical protein;protein_id=WP_000156234.1;transl_table=11 NZ_CP075114.1 RefSeq gene 23613 23708 . + . ID=gene-CCO47_RS24380;Name=dqlB;gbkey=Gene;gene=dqlB;gene_biotype=protein_coding;locus_tag=CCO47_RS24380 NZ_CP075114.1 Protein Homology CDS 23613 23708 . + 0 ID=cds-WP_000609147.1;Parent=gene-CCO47_RS24380;Dbxref=GenBank:WP_000609147.1;Name=WP_000609147.1;gbkey=CDS;gene=dqlB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000609149.1;locus_tag=CCO47_RS24380;product=DinQ-like type I toxin DqlB;protein_id=WP_000609147.1;transl_table=11 NZ_CP075114.1 RefSeq gene 23865 24509 . - . ID=gene-CCO47_RS23715;Name=CCO47_RS23715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23715;old_locus_tag=CCO47_23715 NZ_CP075114.1 Protein Homology CDS 23865 24509 . - 0 ID=cds-WP_000203397.1;Parent=gene-CCO47_RS23715;Dbxref=GenBank:WP_000203397.1;Name=WP_000203397.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001503708.1;locus_tag=CCO47_RS23715;product=recombinase family protein;protein_id=WP_000203397.1;transl_table=11 NZ_CP075114.1 RefSeq pseudogene 24574 28839 . + . ID=gene-CCO47_RS23720;Name=traI;gbkey=Gene;gene=traI;gene_biotype=pseudogene;locus_tag=CCO47_RS23720;old_locus_tag=CCO47_23720;partial=true;pseudo=true;start_range=.,24574 NZ_CP075114.1 Protein Homology CDS 24574 28839 . + 0 ID=cds-CCO47_RS23720;Parent=gene-CCO47_RS23720;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003678;gbkey=CDS;gene=traI;go_function=DNA helicase activity|0003678||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490592.1;locus_tag=CCO47_RS23720;partial=true;product=conjugative transfer relaxase/helicase TraI;pseudo=true;start_range=.,24574;transl_table=11 NZ_CP075114.1 RefSeq gene 28859 29599 . + . ID=gene-CCO47_RS23725;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=CCO47_RS23725;old_locus_tag=CCO47_23725 NZ_CP075114.1 Protein Homology CDS 28859 29599 . + 0 ID=cds-WP_000177628.1;Parent=gene-CCO47_RS23725;Dbxref=GenBank:WP_000177628.1;Name=WP_000177628.1;gbkey=CDS;gene=traX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490593.1;locus_tag=CCO47_RS23725;product=conjugal transfer pilus acetylase TraX;protein_id=WP_000177628.1;transl_table=11 NZ_CP075114.1 RefSeq gene 29654 30217 . + . ID=gene-CCO47_RS23730;Name=CCO47_RS23730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23730;old_locus_tag=CCO47_23730 NZ_CP075114.1 Protein Homology CDS 29654 30217 . + 0 ID=cds-WP_000129019.1;Parent=gene-CCO47_RS23730;Dbxref=GenBank:WP_000129019.1;Name=WP_000129019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490594.1;locus_tag=CCO47_RS23730;product=fertility inhibition protein FinO;protein_id=WP_000129019.1;transl_table=11 NZ_CP075114.1 RefSeq pseudogene 30334 30615 . + . ID=gene-CCO47_RS24335;Name=CCO47_RS24335;end_range=30615,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24335;partial=true;pseudo=true NZ_CP075114.1 Protein Homology CDS 30334 30615 . + 0 ID=cds-CCO47_RS24335;Parent=gene-CCO47_RS24335;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=30615,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490493.1;locus_tag=CCO47_RS24335;partial=true;product=thioredoxin domain-containing protein;pseudo=true;transl_table=11 NZ_CP075114.1 RefSeq pseudogene 30908 31463 . + . ID=gene-CCO47_RS23740;Name=CCO47_RS23740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS23740;old_locus_tag=CCO47_23740;pseudo=true NZ_CP075114.1 Protein Homology CDS 30908 31463 . + 0 ID=cds-CCO47_RS23740;Parent=gene-CCO47_RS23740;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001239601.1;locus_tag=CCO47_RS23740;product=phospholipase D family nuclease;pseudo=true;transl_table=11 NZ_CP075114.1 RefSeq gene 31595 31840 . + . ID=gene-CCO47_RS23745;Name=CCO47_RS23745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23745;old_locus_tag=CCO47_23745 NZ_CP075114.1 Protein Homology CDS 31595 31840 . + 0 ID=cds-WP_000078116.1;Parent=gene-CCO47_RS23745;Dbxref=GenBank:WP_000078116.1;Name=WP_000078116.1;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078117.1;locus_tag=CCO47_RS23745;product=replication regulatory protein RepA;protein_id=WP_000078116.1;transl_table=11 NZ_CP075114.1 RefSeq pseudogene 31879 32028 . - . ID=gene-CCO47_RS24385;Name=CCO47_RS24385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS24385;pseudo=true NZ_CP075114.1 Protein Homology CDS 31879 32028 . - 0 ID=cds-CCO47_RS24385;Parent=gene-CCO47_RS24385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001584988.1;locus_tag=CCO47_RS24385;product=replication protein RepA;pseudo=true;transl_table=11 NZ_CP075114.1 RefSeq gene 32088 32165 . + . ID=gene-CCO47_RS23750;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=CCO47_RS23750;old_locus_tag=CCO47_23750 NZ_CP075114.1 Protein Homology CDS 32088 32165 . + 0 ID=cds-WP_001541552.1;Parent=gene-CCO47_RS23750;Dbxref=GenBank:WP_001541552.1;Name=WP_001541552.1;Ontology_term=GO:0006276,GO:0031556;gbkey=CDS;gene=tap;go_process=plasmid maintenance|0006276||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490497.1;locus_tag=CCO47_RS23750;product=RepA leader peptide Tap;protein_id=WP_001541552.1;transl_table=11 NZ_CP075114.1 RefSeq gene 32146 33027 . + . ID=gene-CCO47_RS23755;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=CCO47_RS23755;old_locus_tag=CCO47_23755 NZ_CP075114.1 Protein Homology CDS 32146 33027 . + 0 ID=cds-WP_001746973.1;Parent=gene-CCO47_RS23755;Dbxref=GenBank:WP_001746973.1;Name=WP_001746973.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490498.3;locus_tag=CCO47_RS23755;product=incFII family plasmid replication initiator RepA;protein_id=WP_001746973.1;transl_table=11 NZ_CP075114.1 RefSeq pseudogene 33813 34216 . - . ID=gene-CCO47_RS23760;Name=CCO47_RS23760;end_range=34216,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS23760;old_locus_tag=CCO47_23760;partial=true;pseudo=true;start_range=.,33813 NZ_CP075114.1 Protein Homology CDS 33813 34216 . - 0 ID=cds-CCO47_RS23760;Parent=gene-CCO47_RS23760;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0032196,GO:0003677;end_range=34216,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA transposition|0006313||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=CCO47_RS23760;partial=true;product=transposase domain-containing protein;pseudo=true;start_range=.,33813;transl_table=11 NZ_CP075114.1 RefSeq pseudogene 34209 34419 . - . ID=gene-CCO47_RS24530;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=CCO47_RS24530;old_locus_tag=CCO47_23765;partial=true;pseudo=true;start_range=.,34209 NZ_CP075114.1 Protein Homology CDS 34209 34419 . - 0 ID=cds-CCO47_RS24530;Parent=gene-CCO47_RS24530;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536669.1;locus_tag=CCO47_RS24530;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;start_range=.,34209;transl_table=11 NZ_CP075114.1 RefSeq gene 34574 34771 . - . ID=gene-CCO47_RS23770;Name=CCO47_RS23770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23770;old_locus_tag=CCO47_23770 NZ_CP075114.1 Protein Homology CDS 34574 34771 . - 0 ID=cds-WP_001675602.1;Parent=gene-CCO47_RS23770;Dbxref=GenBank:WP_001675602.1;Name=WP_001675602.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.7;locus_tag=CCO47_RS23770;product=transposase;protein_id=WP_001675602.1;transl_table=11 NZ_CP075114.1 RefSeq gene 35066 35668 . - . ID=gene-CCO47_RS23775;Name=CCO47_RS23775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23775;old_locus_tag=CCO47_23775 NZ_CP075114.1 GeneMarkS-2+ CDS 35066 35668 . - 0 ID=cds-WP_223151229.1;Parent=gene-CCO47_RS23775;Dbxref=GenBank:WP_223151229.1;Name=WP_223151229.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO47_RS23775;product=hypothetical protein;protein_id=WP_223151229.1;transl_table=11 NZ_CP075114.1 RefSeq gene 35896 36555 . - . ID=gene-CCO47_RS23780;Name=CCO47_RS23780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23780;old_locus_tag=CCO47_23780 NZ_CP075114.1 Protein Homology CDS 35896 36555 . - 0 ID=cds-WP_001575507.1;Parent=gene-CCO47_RS23780;Dbxref=GenBank:WP_001575507.1;Name=WP_001575507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575507.1;locus_tag=CCO47_RS23780;product=hypothetical protein;protein_id=WP_001575507.1;transl_table=11 NZ_CP075114.1 RefSeq gene 38060 38383 . + . ID=gene-CCO47_RS23785;Name=CCO47_RS23785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23785;old_locus_tag=CCO47_23785 NZ_CP075114.1 Protein Homology CDS 38060 38383 . + 0 ID=cds-WP_001575502.1;Parent=gene-CCO47_RS23785;Dbxref=GenBank:WP_001575502.1;Name=WP_001575502.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF014485.7;locus_tag=CCO47_RS23785;product=F4 family fimbrial subunit;protein_id=WP_001575502.1;transl_table=11 NZ_CP075114.1 RefSeq gene 38619 39416 . + . ID=gene-CCO47_RS23790;Name=faeH;gbkey=Gene;gene=faeH;gene_biotype=protein_coding;locus_tag=CCO47_RS23790;old_locus_tag=CCO47_23790 NZ_CP075114.1 Protein Homology CDS 38619 39416 . + 0 ID=cds-WP_000704721.1;Parent=gene-CCO47_RS23790;Dbxref=GenBank:WP_000704721.1;Name=WP_000704721.1;gbkey=CDS;gene=faeH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000704720.1;locus_tag=CCO47_RS23790;product=F4 (K88) fimbria minor subunit FaeH;protein_id=WP_000704721.1;transl_table=11 NZ_CP075114.1 RefSeq gene 39444 40208 . + . ID=gene-CCO47_RS23795;Name=CCO47_RS23795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23795;old_locus_tag=CCO47_23795 NZ_CP075114.1 Protein Homology CDS 39444 40208 . + 0 ID=cds-WP_000827659.1;Parent=gene-CCO47_RS23795;Dbxref=GenBank:WP_000827659.1;Name=WP_000827659.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000827659.1;locus_tag=CCO47_RS23795;product=F4 family fimbrial subunit;protein_id=WP_000827659.1;transl_table=11 NZ_CP075114.1 RefSeq gene 40195 40470 . + . ID=gene-CCO47_RS23800;Name=CCO47_RS23800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23800;old_locus_tag=CCO47_23800 NZ_CP075114.1 Protein Homology CDS 40195 40470 . + 0 ID=cds-WP_001020576.1;Parent=gene-CCO47_RS23800;Dbxref=GenBank:WP_001020576.1;Name=WP_001020576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001020576.1;locus_tag=CCO47_RS23800;product=hypothetical protein;protein_id=WP_001020576.1;transl_table=11 NZ_CP075114.1 RefSeq gene 40470 41183 . + . ID=gene-CCO47_RS23805;Name=CCO47_RS23805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23805;old_locus_tag=CCO47_23805 NZ_CP075114.1 Protein Homology CDS 40470 41183 . + 0 ID=cds-WP_000801115.1;Parent=gene-CCO47_RS23805;Dbxref=GenBank:WP_000801115.1;Name=WP_000801115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801115.1;locus_tag=CCO47_RS23805;product=hypothetical protein;protein_id=WP_000801115.1;transl_table=11 NZ_CP075114.1 RefSeq gene 41308 41892 . + . ID=gene-CCO47_RS23810;Name=CCO47_RS23810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23810;old_locus_tag=CCO47_23810 NZ_CP075114.1 Protein Homology CDS 41308 41892 . + 0 ID=cds-WP_001575501.1;Parent=gene-CCO47_RS23810;Dbxref=GenBank:WP_001575501.1;Name=WP_001575501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576642.1;locus_tag=CCO47_RS23810;product=hypothetical protein;protein_id=WP_001575501.1;transl_table=11 NZ_CP075114.1 RefSeq gene 41965 42177 . + . ID=gene-CCO47_RS23815;Name=CCO47_RS23815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23815;old_locus_tag=CCO47_23815 NZ_CP075114.1 Protein Homology CDS 41965 42177 . + 0 ID=cds-WP_000063794.1;Parent=gene-CCO47_RS23815;Dbxref=GenBank:WP_000063794.1;Name=WP_000063794.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063796.1;locus_tag=CCO47_RS23815;product=FaeA/PapI family transcriptional regulator;protein_id=WP_000063794.1;transl_table=11 NZ_CP075114.1 RefSeq gene 42438 42599 . + . ID=gene-CCO47_RS23820;Name=CCO47_RS23820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23820;old_locus_tag=CCO47_23820 NZ_CP075114.1 GeneMarkS-2+ CDS 42438 42599 . + 0 ID=cds-WP_001816720.1;Parent=gene-CCO47_RS23820;Dbxref=GenBank:WP_001816720.1;Name=WP_001816720.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO47_RS23820;product=hypothetical protein;protein_id=WP_001816720.1;transl_table=11 NZ_CP075114.1 RefSeq gene 42625 43473 . + . ID=gene-CCO47_RS23825;Name=CCO47_RS23825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23825;old_locus_tag=CCO47_23825 NZ_CP075114.1 Protein Homology CDS 42625 43473 . + 0 ID=cds-WP_000175391.1;Parent=gene-CCO47_RS23825;Dbxref=GenBank:WP_000175391.1;Name=WP_000175391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000175395.1;locus_tag=CCO47_RS23825;product=SdiA-regulated domain-containing protein;protein_id=WP_000175391.1;transl_table=11 NZ_CP075114.1 RefSeq gene 44043 44471 . - . ID=gene-CCO47_RS23830;Name=CCO47_RS23830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23830;old_locus_tag=CCO47_23830 NZ_CP075114.1 Protein Homology CDS 44043 44471 . - 0 ID=cds-WP_000812999.1;Parent=gene-CCO47_RS23830;Dbxref=GenBank:WP_000812999.1;Name=WP_000812999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000812999.1;locus_tag=CCO47_RS23830;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_000812999.1;transl_table=11 NZ_CP075114.1 RefSeq gene 44468 44698 . - . ID=gene-CCO47_RS23835;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=CCO47_RS23835;old_locus_tag=CCO47_23835 NZ_CP075114.1 Protein Homology CDS 44468 44698 . - 0 ID=cds-WP_001261283.1;Parent=gene-CCO47_RS23835;Dbxref=GenBank:WP_001261283.1;Name=WP_001261283.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229629.1;locus_tag=CCO47_RS23835;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_001261283.1;transl_table=11 NZ_CP075114.1 RefSeq gene 45443 45661 . + . ID=gene-CCO47_RS23840;Name=ccdA;gbkey=Gene;gene=ccdA;gene_biotype=protein_coding;locus_tag=CCO47_RS23840;old_locus_tag=CCO47_23840 NZ_CP075114.1 Protein Homology CDS 45443 45661 . + 0 ID=cds-WP_000813641.1;Parent=gene-CCO47_RS23840;Dbxref=GenBank:WP_000813641.1;Name=WP_000813641.1;gbkey=CDS;gene=ccdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490517.1;locus_tag=CCO47_RS23840;product=type II toxin-antitoxin system antitoxin CcdA;protein_id=WP_000813641.1;transl_table=11 NZ_CP075114.1 RefSeq gene 45663 45968 . + . ID=gene-CCO47_RS23845;Name=ccdB;gbkey=Gene;gene=ccdB;gene_biotype=protein_coding;locus_tag=CCO47_RS23845;old_locus_tag=CCO47_23845 NZ_CP075114.1 Protein Homology CDS 45663 45968 . + 0 ID=cds-WP_001159863.1;Parent=gene-CCO47_RS23845;Dbxref=GenBank:WP_001159863.1;Name=WP_001159863.1;gbkey=CDS;gene=ccdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490518.1;locus_tag=CCO47_RS23845;product=type II toxin-antitoxin system toxin CcdB;protein_id=WP_001159863.1;transl_table=11 NZ_CP075114.1 RefSeq gene 45970 46260 . + . ID=gene-CCO47_RS23850;Name=CCO47_RS23850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23850;old_locus_tag=CCO47_23850 NZ_CP075114.1 Protein Homology CDS 45970 46260 . + 0 ID=cds-WP_001266176.1;Parent=gene-CCO47_RS23850;Dbxref=GenBank:WP_001266176.1;Name=WP_001266176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490519.1;locus_tag=CCO47_RS23850;product=hypothetical protein;protein_id=WP_001266176.1;transl_table=11 NZ_CP075114.1 RefSeq gene 46257 46778 . + . ID=gene-CCO47_RS23855;Name=CCO47_RS23855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23855;old_locus_tag=CCO47_23855 NZ_CP075114.1 Protein Homology CDS 46257 46778 . + 0 ID=cds-WP_000198608.1;Parent=gene-CCO47_RS23855;Dbxref=GenBank:WP_000198608.1;Name=WP_000198608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490520.1;locus_tag=CCO47_RS23855;product=hypothetical protein;protein_id=WP_000198608.1;transl_table=11 NZ_CP075114.1 RefSeq gene 46813 47595 . + . ID=gene-CCO47_RS23860;Name=CCO47_RS23860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23860;old_locus_tag=CCO47_23860 NZ_CP075114.1 Protein Homology CDS 46813 47595 . + 0 ID=cds-WP_000082169.1;Parent=gene-CCO47_RS23860;Dbxref=GenBank:WP_000082169.1;Name=WP_000082169.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490521.1;locus_tag=CCO47_RS23860;product=site-specific integrase;protein_id=WP_000082169.1;transl_table=11 NZ_CP075114.1 RefSeq gene 47604 48317 . + . ID=gene-CCO47_RS23865;Name=CCO47_RS23865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23865;old_locus_tag=CCO47_23865 NZ_CP075114.1 Protein Homology CDS 47604 48317 . + 0 ID=cds-WP_000545756.1;Parent=gene-CCO47_RS23865;Dbxref=GenBank:WP_000545756.1;Name=WP_000545756.1;Ontology_term=GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000545756.1;locus_tag=CCO47_RS23865;product=EAL domain-containing protein;protein_id=WP_000545756.1;transl_table=11 NZ_CP075114.1 RefSeq gene 48321 48830 . + . ID=gene-CCO47_RS23870;Name=CCO47_RS23870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23870;old_locus_tag=CCO47_23870 NZ_CP075114.1 Protein Homology CDS 48321 48830 . + 0 ID=cds-WP_001541544.1;Parent=gene-CCO47_RS23870;Dbxref=GenBank:WP_001541544.1;Name=WP_001541544.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541544.1;locus_tag=CCO47_RS23870;product=CaiF/GrlA family transcriptional regulator;protein_id=WP_001541544.1;transl_table=11 NZ_CP075114.1 RefSeq pseudogene 48824 49163 . + . ID=gene-CCO47_RS23875;Name=CCO47_RS23875;end_range=49163,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS23875;old_locus_tag=CCO47_23875;partial=true;pseudo=true NZ_CP075114.1 Protein Homology CDS 48824 49163 . + 0 ID=cds-CCO47_RS23875;Parent=gene-CCO47_RS23875;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=49163,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490523.1;locus_tag=CCO47_RS23875;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075114.1 RefSeq gene 49070 49492 . + . ID=gene-CCO47_RS24340;Name=CCO47_RS24340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24340 NZ_CP075114.1 Protein Homology CDS 49070 49492 . + 0 ID=cds-WP_225236769.1;Parent=gene-CCO47_RS24340;Dbxref=GenBank:WP_225236769.1;Name=WP_225236769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014411929.1;locus_tag=CCO47_RS24340;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_225236769.1;transl_table=11 NZ_CP075114.1 RefSeq gene 49387 49932 . + . ID=gene-CCO47_RS23880;Name=CCO47_RS23880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23880;old_locus_tag=CCO47_23880 NZ_CP075114.1 Protein Homology CDS 49387 49932 . + 0 ID=cds-WP_071591236.1;Parent=gene-CCO47_RS23880;Dbxref=GenBank:WP_071591236.1;Name=WP_071591236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490524.1;locus_tag=CCO47_RS23880;product=inverse autotransporter beta domain-containing protein;protein_id=WP_071591236.1;transl_table=11 NZ_CP075114.1 RefSeq gene 49999 50385 . - . ID=gene-CCO47_RS23885;Name=CCO47_RS23885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23885;old_locus_tag=CCO47_23885 NZ_CP075114.1 Protein Homology CDS 49999 50385 . - 0 ID=cds-WP_012301160.1;Parent=gene-CCO47_RS23885;Dbxref=GenBank:WP_012301160.1;Name=WP_012301160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490525.1;locus_tag=CCO47_RS23885;product=helix-turn-helix domain-containing protein;protein_id=WP_012301160.1;transl_table=11 NZ_CP075114.1 RefSeq gene 50442 50867 . + . ID=gene-CCO47_RS23890;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=CCO47_RS23890;old_locus_tag=CCO47_23890 NZ_CP075114.1 Protein Homology CDS 50442 50867 . + 0 ID=cds-WP_000064919.1;Parent=gene-CCO47_RS23890;Dbxref=GenBank:WP_000064919.1;Name=WP_000064919.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064873.1;locus_tag=CCO47_RS23890;product=IS200/IS605 family transposase;protein_id=WP_000064919.1;transl_table=11 NZ_CP075114.1 RefSeq gene 50994 51644 . - . ID=gene-CCO47_RS23895;Name=spvD;gbkey=Gene;gene=spvD;gene_biotype=protein_coding;locus_tag=CCO47_RS23895;old_locus_tag=CCO47_23895 NZ_CP075114.1 Protein Homology CDS 50994 51644 . - 0 ID=cds-WP_001575489.1;Parent=gene-CCO47_RS23895;Dbxref=GenBank:WP_001575489.1;Name=WP_001575489.1;gbkey=CDS;gene=spvD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490527.1;locus_tag=CCO47_RS23895;product=SPI-2 type III secretion system effector cysteine hydrolase SpvD;protein_id=WP_001575489.1;transl_table=11 NZ_CP075114.1 RefSeq gene 51905 52630 . - . ID=gene-CCO47_RS23900;Name=spvC;gbkey=Gene;gene=spvC;gene_biotype=protein_coding;locus_tag=CCO47_RS23900;old_locus_tag=CCO47_23900 NZ_CP075114.1 Protein Homology CDS 51905 52630 . - 0 ID=cds-WP_001122242.1;Parent=gene-CCO47_RS23900;Dbxref=GenBank:WP_001122242.1;Name=WP_001122242.1;gbkey=CDS;gene=spvC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490528.1;locus_tag=CCO47_RS23900;product=type III secretion system effector phosphothreonine lyase SpvC;protein_id=WP_001122242.1;transl_table=11 NZ_CP075114.1 RefSeq gene 52911 54692 . - . ID=gene-CCO47_RS23905;Name=spvB;gbkey=Gene;gene=spvB;gene_biotype=protein_coding;locus_tag=CCO47_RS23905;old_locus_tag=CCO47_23905 NZ_CP075114.1 Protein Homology CDS 52911 54692 . - 0 ID=cds-WP_001675599.1;Parent=gene-CCO47_RS23905;Dbxref=GenBank:WP_001675599.1;Name=WP_001675599.1;gbkey=CDS;gene=spvB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490529.1;locus_tag=CCO47_RS23905;product=SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB;protein_id=WP_001675599.1;transl_table=11 NZ_CP075114.1 RefSeq gene 54744 54911 . - . ID=gene-CCO47_RS23910;Name=CCO47_RS23910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23910;old_locus_tag=CCO47_23910 NZ_CP075114.1 GeneMarkS-2+ CDS 54744 54911 . - 0 ID=cds-WP_001526987.1;Parent=gene-CCO47_RS23910;Dbxref=GenBank:WP_001526987.1;Name=WP_001526987.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO47_RS23910;product=hypothetical protein;protein_id=WP_001526987.1;transl_table=11 NZ_CP075114.1 RefSeq gene 54874 55641 . - . ID=gene-CCO47_RS23915;Name=spvA;gbkey=Gene;gene=spvA;gene_biotype=protein_coding;locus_tag=CCO47_RS23915;old_locus_tag=CCO47_23915 NZ_CP075114.1 Protein Homology CDS 54874 55641 . - 0 ID=cds-WP_001575487.1;Parent=gene-CCO47_RS23915;Dbxref=GenBank:WP_001575487.1;Name=WP_001575487.1;gbkey=CDS;gene=spvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490530.1;locus_tag=CCO47_RS23915;product=virulence protein SpvA;protein_id=WP_001575487.1;transl_table=11 NZ_CP075114.1 RefSeq pseudogene 55815 56055 . - . ID=gene-CCO47_RS23920;Name=CCO47_RS23920;end_range=56055,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS23920;old_locus_tag=CCO47_23920;partial=true;pseudo=true NZ_CP075114.1 Protein Homology CDS 55815 56055 . - 0 ID=cds-CCO47_RS23920;Parent=gene-CCO47_RS23920;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009253,GO:0003796;end_range=56055,.;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820532.1;locus_tag=CCO47_RS23920;partial=true;product=lysozyme;pseudo=true;transl_table=11 NZ_CP075114.1 RefSeq gene 56153 57046 . - . ID=gene-CCO47_RS23925;Name=spvR;gbkey=Gene;gene=spvR;gene_biotype=protein_coding;locus_tag=CCO47_RS23925;old_locus_tag=CCO47_23925 NZ_CP075114.1 Protein Homology CDS 56153 57046 . - 0 ID=cds-WP_000346692.1;Parent=gene-CCO47_RS23925;Dbxref=GenBank:WP_000346692.1;Name=WP_000346692.1;Ontology_term=GO:0003677,GO:0140110;gbkey=CDS;gene=spvR;go_function=DNA binding|0003677||IEA,transcription regulator activity|0140110||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490531.1;locus_tag=CCO47_RS23925;product=virulence genes transcriptional activator SpvR;protein_id=WP_000346692.1;transl_table=11 NZ_CP075114.1 RefSeq gene 57653 58690 . + . ID=gene-CCO47_RS23930;Name=CCO47_RS23930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23930;old_locus_tag=CCO47_23930 NZ_CP075114.1 Protein Homology CDS 57653 58690 . + 0 ID=cds-WP_001121398.1;Parent=gene-CCO47_RS23930;Dbxref=GenBank:WP_001121398.1;Name=WP_001121398.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490532.1;locus_tag=CCO47_RS23930;product=IS630 family transposase;protein_id=WP_001121398.1;transl_table=11 NZ_CP075114.1 RefSeq gene 58879 59904 . - . ID=gene-CCO47_RS23935;Name=CCO47_RS23935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23935;old_locus_tag=CCO47_23935 NZ_CP075114.1 Protein Homology CDS 58879 59904 . - 0 ID=cds-WP_001576625.1;Parent=gene-CCO47_RS23935;Dbxref=GenBank:WP_001576625.1;Name=WP_001576625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490533.1;locus_tag=CCO47_RS23935;product=ExeA family protein;protein_id=WP_001576625.1;transl_table=11 NZ_CP075114.1 RefSeq gene 59837 61501 . - . ID=gene-CCO47_RS23940;Name=CCO47_RS23940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23940;old_locus_tag=CCO47_23940 NZ_CP075114.1 Protein Homology CDS 59837 61501 . - 0 ID=cds-WP_000098783.1;Parent=gene-CCO47_RS23940;Dbxref=GenBank:WP_000098783.1;Name=WP_000098783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490534.1;locus_tag=CCO47_RS23940;product=IS481 family transposase;protein_id=WP_000098783.1;transl_table=11 NZ_CP075114.1 RefSeq gene 61485 62045 . - . ID=gene-CCO47_RS23945;Name=CCO47_RS23945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23945;old_locus_tag=CCO47_23945 NZ_CP075114.1 Protein Homology CDS 61485 62045 . - 0 ID=cds-WP_001240330.1;Parent=gene-CCO47_RS23945;Dbxref=GenBank:WP_001240330.1;Name=WP_001240330.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490535.1;locus_tag=CCO47_RS23945;product=recombinase family protein;protein_id=WP_001240330.1;transl_table=11 NZ_CP075114.1 RefSeq gene 62252 62992 . - . ID=gene-CCO47_RS23950;Name=CCO47_RS23950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23950;old_locus_tag=CCO47_23950 NZ_CP075114.1 Protein Homology CDS 62252 62992 . - 0 ID=cds-WP_001541566.1;Parent=gene-CCO47_RS23950;Dbxref=GenBank:WP_001541566.1;Name=WP_001541566.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490536.1;locus_tag=CCO47_RS23950;product=carbonic anhydrase;protein_id=WP_001541566.1;transl_table=11 NZ_CP075114.1 RefSeq gene 63647 64135 . - . ID=gene-CCO47_RS23955;Name=CCO47_RS23955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23955;old_locus_tag=CCO47_23955 NZ_CP075114.1 Protein Homology CDS 63647 64135 . - 0 ID=cds-WP_001135407.1;Parent=gene-CCO47_RS23955;Dbxref=GenBank:WP_001135407.1;Name=WP_001135407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490537.1;locus_tag=CCO47_RS23955;product=hypothetical protein;protein_id=WP_001135407.1;transl_table=11 NZ_CP075114.1 RefSeq gene 64394 65509 . + . ID=gene-CCO47_RS23960;Name=CCO47_RS23960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23960;old_locus_tag=CCO47_23960 NZ_CP075114.1 Protein Homology CDS 64394 65509 . + 0 ID=cds-WP_001247118.1;Parent=gene-CCO47_RS23960;Dbxref=GenBank:WP_001247118.1;Name=WP_001247118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490538.1;locus_tag=CCO47_RS23960;product=DNA-binding protein;protein_id=WP_001247118.1;transl_table=11 NZ_CP075114.1 RefSeq pseudogene 65502 66142 . + . ID=gene-CCO47_RS23965;Name=CCO47_RS23965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS23965;old_locus_tag=CCO47_23965;pseudo=true NZ_CP075114.1 Protein Homology CDS 65502 66142 . + 0 ID=cds-CCO47_RS23965;Parent=gene-CCO47_RS23965;Note=frameshifted;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525580.1;locus_tag=CCO47_RS23965;product=3'-5' exonuclease family protein;pseudo=true;transl_table=11 NZ_CP075114.1 RefSeq gene 66114 66530 . + . ID=gene-CCO47_RS23970;Name=CCO47_RS23970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23970;old_locus_tag=CCO47_23970 NZ_CP075114.1 Protein Homology CDS 66114 66530 . + 0 ID=cds-WP_000988946.1;Parent=gene-CCO47_RS23970;Dbxref=GenBank:WP_000988946.1;Name=WP_000988946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000988947.1;locus_tag=CCO47_RS23970;product=hypothetical protein;protein_id=WP_000988946.1;transl_table=11 NZ_CP075114.1 RefSeq pseudogene 66587 67188 . + . ID=gene-CCO47_RS23975;Name=CCO47_RS23975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS23975;old_locus_tag=CCO47_23975;pseudo=true NZ_CP075114.1 Protein Homology CDS 66587 67188 . + 0 ID=cds-CCO47_RS23975;Parent=gene-CCO47_RS23975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455304.1;locus_tag=CCO47_RS23975;product=DUF2913 family protein;pseudo=true;transl_table=11 NZ_CP075114.1 RefSeq pseudogene 67185 68127 . - . ID=gene-CCO47_RS23980;Name=CCO47_RS23980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO47_RS23980;old_locus_tag=CCO47_23980;pseudo=true NZ_CP075114.1 Protein Homology CDS 67185 68127 . - 0 ID=cds-CCO47_RS23980;Parent=gene-CCO47_RS23980;Note=frameshifted;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004536,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA nuclease activity|0004536||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=CCO47_RS23980;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11 NZ_CP075114.1 RefSeq gene 68521 69141 . + . ID=gene-CCO47_RS23985;Name=CCO47_RS23985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23985;old_locus_tag=CCO47_23985 NZ_CP075114.1 Protein Homology CDS 68521 69141 . + 0 ID=cds-WP_000864788.1;Parent=gene-CCO47_RS23985;Dbxref=GenBank:WP_000864788.1;Name=WP_000864788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864791.1;locus_tag=CCO47_RS23985;product=ParA family protein;protein_id=WP_000864788.1;transl_table=11 NZ_CP075114.1 RefSeq gene 69193 69423 . + . ID=gene-CCO47_RS23990;Name=CCO47_RS23990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS23990;old_locus_tag=CCO47_23990 NZ_CP075114.1 Protein Homology CDS 69193 69423 . + 0 ID=cds-WP_000051066.1;Parent=gene-CCO47_RS23990;Dbxref=GenBank:WP_000051066.1;Name=WP_000051066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051067.1;locus_tag=CCO47_RS23990;product=plasmid partition protein ParG;protein_id=WP_000051066.1;transl_table=11 NZ_CP075114.1 RefSeq gene 70062 70484 . - . ID=gene-CCO47_RS23995;Name=ddp1;gbkey=Gene;gene=ddp1;gene_biotype=protein_coding;locus_tag=CCO47_RS23995;old_locus_tag=CCO47_23995 NZ_CP075114.1 Protein Homology CDS 70062 70484 . - 0 ID=cds-WP_000202949.1;Parent=gene-CCO47_RS23995;Dbxref=GenBank:WP_000202949.1;Name=WP_000202949.1;gbkey=CDS;gene=ddp1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000202950.1;locus_tag=CCO47_RS23995;product=DNA distortion polypeptide 3;protein_id=WP_000202949.1;transl_table=11 NZ_CP075114.1 RefSeq gene 70552 70998 . - . ID=gene-CCO47_RS24000;Name=CCO47_RS24000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24000;old_locus_tag=CCO47_24000 NZ_CP075114.1 Protein Homology CDS 70552 70998 . - 0 ID=cds-WP_001074381.1;Parent=gene-CCO47_RS24000;Dbxref=GenBank:WP_001074381.1;Name=WP_001074381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001074384.1;locus_tag=CCO47_RS24000;product=hypothetical protein;protein_id=WP_001074381.1;transl_table=11 NZ_CP075114.1 RefSeq gene 71038 71874 . - . ID=gene-CCO47_RS24005;Name=CCO47_RS24005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24005;old_locus_tag=CCO47_24005 NZ_CP075114.1 Protein Homology CDS 71038 71874 . - 0 ID=cds-WP_001575533.1;Parent=gene-CCO47_RS24005;Dbxref=GenBank:WP_001575533.1;Name=WP_001575533.1;Ontology_term=GO:0006270,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001050932.1;locus_tag=CCO47_RS24005;product=replication initiation protein;protein_id=WP_001575533.1;transl_table=11 NZ_CP075114.1 RefSeq gene 73110 73361 . + . ID=gene-CCO47_RS24010;Name=CCO47_RS24010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24010;old_locus_tag=CCO47_24010 NZ_CP075114.1 Protein Homology CDS 73110 73361 . + 0 ID=cds-WP_000121743.1;Parent=gene-CCO47_RS24010;Dbxref=GenBank:WP_000121743.1;Name=WP_000121743.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000121741.1;locus_tag=CCO47_RS24010;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_000121743.1;transl_table=11 NZ_CP075114.1 RefSeq gene 73351 73632 . + . ID=gene-CCO47_RS24015;Name=CCO47_RS24015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24015;old_locus_tag=CCO47_24015 NZ_CP075114.1 Protein Homology CDS 73351 73632 . + 0 ID=cds-WP_000220560.1;Parent=gene-CCO47_RS24015;Dbxref=GenBank:WP_000220560.1;Name=WP_000220560.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001694627.1;locus_tag=CCO47_RS24015;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000220560.1;transl_table=11 NZ_CP075114.1 RefSeq gene 73778 74101 . + . ID=gene-CCO47_RS24020;Name=CCO47_RS24020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24020;old_locus_tag=CCO47_24020 NZ_CP075114.1 Protein Homology CDS 73778 74101 . + 0 ID=cds-WP_001181909.1;Parent=gene-CCO47_RS24020;Dbxref=GenBank:WP_001181909.1;Name=WP_001181909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001181902.1;locus_tag=CCO47_RS24020;product=hypothetical protein;protein_id=WP_001181909.1;transl_table=11 NZ_CP075114.1 RefSeq gene 74146 74391 . + . ID=gene-CCO47_RS24025;Name=CCO47_RS24025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24025;old_locus_tag=CCO47_24025 NZ_CP075114.1 Protein Homology CDS 74146 74391 . + 0 ID=cds-WP_000356542.1;Parent=gene-CCO47_RS24025;Dbxref=GenBank:WP_000356542.1;Name=WP_000356542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550454.1;locus_tag=CCO47_RS24025;product=hypothetical protein;protein_id=WP_000356542.1;transl_table=11 NZ_CP075114.1 RefSeq gene 74381 74596 . + . ID=gene-CCO47_RS24030;Name=CCO47_RS24030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO47_RS24030;old_locus_tag=CCO47_24030 NZ_CP075114.1 Protein Homology CDS 74381 74596 . + 0 ID=cds-WP_001180117.1;Parent=gene-CCO47_RS24030;Dbxref=GenBank:WP_001180117.1;Name=WP_001180117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001180116.1;locus_tag=CCO47_RS24030;product=hypothetical protein;protein_id=WP_001180117.1;transl_table=11 ###