##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM226632v2 #!genome-build-accession NCBI_Assembly:GCF_002266325.2 #!annotation-date 09/15/2026 16:52:37 #!annotation-source NCBI RefSeq GCF_002266325.2-RS_2026_09_15 ##sequence-region NZ_CP075116.1 1 4688242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=286782 NZ_CP075116.1 RefSeq region 1 4688242 . + . ID=NZ_CP075116.1:1..4688242;Dbxref=taxon:286782;Is_circular=true;Name=ANONYMOUS;collected-by=University of Ibadan;collection-date=2012;country=Nigeria;gbkey=Src;genome=chromosome;isolation-source=cattle stool (Bos taurus);mol_type=genomic DNA;nat-host=Bos taurus;serovar=Stanleyville;strain=CFSAN059881 NZ_CP075116.1 RefSeq gene 1 1401 . + . ID=gene-CCO40_RS00005;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=CCO40_RS00005;old_locus_tag=CCO40_00005 NZ_CP075116.1 Protein Homology CDS 1 1401 . + 0 ID=cds-WP_000059093.1;Parent=gene-CCO40_RS00005;Dbxref=GenBank:WP_000059093.1;Name=WP_000059093.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=CCO40_RS00005;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059093.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1406 2506 . + . ID=gene-CCO40_RS00010;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=CCO40_RS00010;old_locus_tag=CCO40_00010 NZ_CP075116.1 Protein Homology CDS 1406 2506 . + 0 ID=cds-WP_000673478.1;Parent=gene-CCO40_RS00010;Dbxref=GenBank:WP_000673478.1;Name=WP_000673478.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=CCO40_RS00010;product=DNA polymerase III subunit beta;protein_id=WP_000673478.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2654 3727 . + . ID=gene-CCO40_RS00015;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=CCO40_RS00015;old_locus_tag=CCO40_00015 NZ_CP075116.1 Protein Homology CDS 2654 3727 . + 0 ID=cds-WP_000060085.1;Parent=gene-CCO40_RS00015;Dbxref=GenBank:WP_000060085.1;Name=WP_000060085.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=CCO40_RS00015;product=DNA replication/repair protein RecF;protein_id=WP_000060085.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3756 6170 . + . ID=gene-CCO40_RS00020;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=CCO40_RS00020;old_locus_tag=CCO40_00020 NZ_CP075116.1 Protein Homology CDS 3756 6170 . + 0 ID=cds-WP_000072047.1;Parent=gene-CCO40_RS00020;Dbxref=GenBank:WP_000072047.1;Name=WP_000072047.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=CCO40_RS00020;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_000072047.1;transl_table=11 NZ_CP075116.1 RefSeq gene 6189 7085 . - . ID=gene-CCO40_RS00025;Name=CCO40_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00025;old_locus_tag=CCO40_00025 NZ_CP075116.1 Protein Homology CDS 6189 7085 . - 0 ID=cds-WP_001054596.1;Parent=gene-CCO40_RS00025;Dbxref=GenBank:WP_001054596.1;Name=WP_001054596.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462734.1;locus_tag=CCO40_RS00025;product=LysR family transcriptional regulator;protein_id=WP_001054596.1;transl_table=11 NZ_CP075116.1 RefSeq gene 7200 8390 . - . ID=gene-CCO40_RS00030;Name=CCO40_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00030;old_locus_tag=CCO40_00030 NZ_CP075116.1 Protein Homology CDS 7200 8390 . - 0 ID=cds-WP_001531627.1;Parent=gene-CCO40_RS00030;Dbxref=GenBank:WP_001531627.1;Name=WP_001531627.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764034.1;locus_tag=CCO40_RS00030;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_001531627.1;transl_table=11 NZ_CP075116.1 RefSeq gene 8407 9669 . - . ID=gene-CCO40_RS00035;Name=CCO40_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00035;old_locus_tag=CCO40_00035 NZ_CP075116.1 Protein Homology CDS 8407 9669 . - 0 ID=cds-WP_000061260.1;Parent=gene-CCO40_RS00035;Dbxref=GenBank:WP_000061260.1;Name=WP_000061260.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462732.1;locus_tag=CCO40_RS00035;product=MFS transporter;protein_id=WP_000061260.1;transl_table=11 NZ_CP075116.1 RefSeq gene 9976 10821 . + . ID=gene-CCO40_RS00040;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=CCO40_RS00040;old_locus_tag=CCO40_00040 NZ_CP075116.1 Protein Homology CDS 9976 10821 . + 0 ID=cds-WP_000985539.1;Parent=gene-CCO40_RS00040;Dbxref=GenBank:WP_000985539.1;Name=WP_000985539.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462731.1;locus_tag=CCO40_RS00040;product=sugar-phosphatase;protein_id=WP_000985539.1;transl_table=11 NZ_CP075116.1 RefSeq gene 11082 11771 . + . ID=gene-CCO40_RS00045;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=CCO40_RS00045;old_locus_tag=CCO40_00045 NZ_CP075116.1 Protein Homology CDS 11082 11771 . + 0 ID=cds-WP_000174317.1;Parent=gene-CCO40_RS00045;Dbxref=GenBank:WP_000174317.1;Name=WP_000174317.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462730.1;locus_tag=CCO40_RS00045;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WP_000174317.1;transl_table=11 NZ_CP075116.1 RefSeq gene 11768 12646 . + . ID=gene-CCO40_RS00050;Name=CCO40_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00050;old_locus_tag=CCO40_00050 NZ_CP075116.1 Protein Homology CDS 11768 12646 . + 0 ID=cds-WP_000127130.1;Parent=gene-CCO40_RS00050;Dbxref=GenBank:WP_000127130.1;Name=WP_000127130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462729.1;locus_tag=CCO40_RS00050;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_000127130.1;transl_table=11 NZ_CP075116.1 RefSeq gene 12630 13247 . + . ID=gene-CCO40_RS00055;Name=CCO40_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00055;old_locus_tag=CCO40_00055 NZ_CP075116.1 Protein Homology CDS 12630 13247 . + 0 ID=cds-WP_001198744.1;Parent=gene-CCO40_RS00055;Dbxref=GenBank:WP_001198744.1;Name=WP_001198744.1;Ontology_term=GO:0034194,GO:0008674;gbkey=CDS;go_function=2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity|0008674||IEA;go_process=D-galactonate catabolic process|0034194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229569.1;locus_tag=CCO40_RS00055;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_001198744.1;transl_table=11 NZ_CP075116.1 RefSeq gene 13244 14392 . + . ID=gene-CCO40_RS00060;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=CCO40_RS00060;old_locus_tag=CCO40_00060 NZ_CP075116.1 Protein Homology CDS 13244 14392 . + 0 ID=cds-WP_000704735.1;Parent=gene-CCO40_RS00060;Dbxref=GenBank:WP_000704735.1;Name=WP_000704735.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=CCO40_RS00060;product=galactonate dehydratase;protein_id=WP_000704735.1;transl_table=11 NZ_CP075116.1 RefSeq gene 14477 15814 . + . ID=gene-CCO40_RS00065;Name=CCO40_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00065;old_locus_tag=CCO40_00065 NZ_CP075116.1 Protein Homology CDS 14477 15814 . + 0 ID=cds-WP_000253524.1;Parent=gene-CCO40_RS00065;Dbxref=GenBank:WP_000253524.1;Name=WP_000253524.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462727.1;locus_tag=CCO40_RS00065;product=MFS transporter;protein_id=WP_000253524.1;transl_table=11 NZ_CP075116.1 RefSeq gene 15840 18575 . - . ID=gene-CCO40_RS00070;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=CCO40_RS00070;old_locus_tag=CCO40_00070 NZ_CP075116.1 Protein Homology CDS 15840 18575 . - 0 ID=cds-WP_045717494.1;Parent=gene-CCO40_RS00070;Dbxref=GenBank:WP_045717494.1;Name=WP_045717494.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=CCO40_RS00070;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_045717494.1;transl_table=11 NZ_CP075116.1 RefSeq gene 18655 19695 . + . ID=gene-CCO40_RS00075;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=CCO40_RS00075;old_locus_tag=CCO40_00075 NZ_CP075116.1 Protein Homology CDS 18655 19695 . + 0 ID=cds-WP_094889343.1;Parent=gene-CCO40_RS00075;Dbxref=GenBank:WP_094889343.1;Name=WP_094889343.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462725.1;locus_tag=CCO40_RS00075;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_094889343.1;transl_table=11 NZ_CP075116.1 RefSeq gene 19668 20360 . - . ID=gene-CCO40_RS00080;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=CCO40_RS00080;old_locus_tag=CCO40_00080 NZ_CP075116.1 Protein Homology CDS 19668 20360 . - 0 ID=cds-WP_001562512.1;Parent=gene-CCO40_RS00080;Dbxref=GenBank:WP_001562512.1;Name=WP_001562512.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=CCO40_RS00080;product=two-component system response regulator TorR;protein_id=WP_001562512.1;transl_table=11 NZ_CP075116.1 RefSeq gene 20490 21674 . + . ID=gene-CCO40_RS00085;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=CCO40_RS00085;old_locus_tag=CCO40_00085 NZ_CP075116.1 Protein Homology CDS 20490 21674 . + 0 ID=cds-WP_001230254.1;Parent=gene-CCO40_RS00085;Dbxref=GenBank:WP_001230254.1;Name=WP_001230254.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=CCO40_RS00085;product=pentaheme c-type cytochrome TorC;protein_id=WP_001230254.1;transl_table=11 NZ_CP075116.1 RefSeq gene 21664 24216 . + . ID=gene-CCO40_RS00090;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=CCO40_RS00090;old_locus_tag=CCO40_00090 NZ_CP075116.1 Protein Homology CDS 21664 24216 . + 0 ID=cds-WP_080176809.1;Parent=gene-CCO40_RS00090;Dbxref=GenBank:WP_080176809.1;Name=WP_080176809.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462722.1;locus_tag=CCO40_RS00090;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_080176809.1;transl_table=11 NZ_CP075116.1 RefSeq gene 24209 24841 . + . ID=gene-CCO40_RS00095;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=CCO40_RS00095;old_locus_tag=CCO40_00095 NZ_CP075116.1 Protein Homology CDS 24209 24841 . + 0 ID=cds-WP_000595421.1;Parent=gene-CCO40_RS00095;Dbxref=GenBank:WP_000595421.1;Name=WP_000595421.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462721.1;locus_tag=CCO40_RS00095;product=molecular chaperone TorD;protein_id=WP_000595421.1;transl_table=11 NZ_CP075116.1 RefSeq gene 25031 26431 . + . ID=gene-CCO40_RS00100;Name=CCO40_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00100;old_locus_tag=CCO40_00100 NZ_CP075116.1 Protein Homology CDS 25031 26431 . + 0 ID=cds-WP_000724476.1;Parent=gene-CCO40_RS00100;Dbxref=GenBank:WP_000724476.1;Name=WP_000724476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462720.1;locus_tag=CCO40_RS00100;product=cytochrome-c peroxidase;protein_id=WP_000724476.1;transl_table=11 NZ_CP075116.1 RefSeq gene 26437 27054 . + . ID=gene-CCO40_RS00105;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=CCO40_RS00105;old_locus_tag=CCO40_00105 NZ_CP075116.1 Protein Homology CDS 26437 27054 . + 0 ID=cds-WP_000888528.1;Parent=gene-CCO40_RS00105;Dbxref=GenBank:WP_000888528.1;Name=WP_000888528.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=CCO40_RS00105;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_000888528.1;transl_table=11 NZ_CP075116.1 RefSeq gene 27051 27710 . + . ID=gene-CCO40_RS00110;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=CCO40_RS00110;old_locus_tag=CCO40_00110 NZ_CP075116.1 Protein Homology CDS 27051 27710 . + 0 ID=cds-WP_024146028.1;Parent=gene-CCO40_RS00110;Dbxref=GenBank:WP_024146028.1;Name=WP_024146028.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=CCO40_RS00110;product=heme exporter protein CcmB;protein_id=WP_024146028.1;transl_table=11 NZ_CP075116.1 RefSeq gene 27761 28498 . + . ID=gene-CCO40_RS00115;Name=CCO40_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00115;old_locus_tag=CCO40_00115 NZ_CP075116.1 Protein Homology CDS 27761 28498 . + 0 ID=cds-WP_220569203.1;Parent=gene-CCO40_RS00115;Dbxref=GenBank:WP_220569203.1;Name=WP_220569203.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=CCO40_RS00115;product=heme ABC transporter permease;protein_id=WP_220569203.1;transl_table=11 NZ_CP075116.1 RefSeq gene 28495 28707 . + . ID=gene-CCO40_RS00120;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=CCO40_RS00120;old_locus_tag=CCO40_00120 NZ_CP075116.1 Protein Homology CDS 28495 28707 . + 0 ID=cds-WP_000074110.1;Parent=gene-CCO40_RS00120;Dbxref=GenBank:WP_000074110.1;Name=WP_000074110.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=CCO40_RS00120;product=heme exporter protein CcmD;protein_id=WP_000074110.1;transl_table=11 NZ_CP075116.1 RefSeq gene 28704 29183 . + . ID=gene-CCO40_RS00125;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=CCO40_RS00125;old_locus_tag=CCO40_00125 NZ_CP075116.1 Protein Homology CDS 28704 29183 . + 0 ID=cds-WP_001053600.1;Parent=gene-CCO40_RS00125;Dbxref=GenBank:WP_001053600.1;Name=WP_001053600.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=CCO40_RS00125;product=cytochrome c maturation protein CcmE;protein_id=WP_001053600.1;transl_table=11 NZ_CP075116.1 RefSeq gene 29180 31111 . + . ID=gene-CCO40_RS00130;Name=CCO40_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00130;old_locus_tag=CCO40_00130 NZ_CP075116.1 Protein Homology CDS 29180 31111 . + 0 ID=cds-WP_053445614.1;Parent=gene-CCO40_RS00130;Dbxref=GenBank:WP_053445614.1;Name=WP_053445614.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=CCO40_RS00130;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_053445614.1;transl_table=11 NZ_CP075116.1 RefSeq gene 31108 31665 . + . ID=gene-CCO40_RS00135;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=CCO40_RS00135;old_locus_tag=CCO40_00135 NZ_CP075116.1 Protein Homology CDS 31108 31665 . + 0 ID=cds-WP_063814174.1;Parent=gene-CCO40_RS00135;Dbxref=GenBank:WP_063814174.1;Name=WP_063814174.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=CCO40_RS00135;product=thiol:disulfide interchange protein DsbE;protein_id=WP_063814174.1;transl_table=11 NZ_CP075116.1 RefSeq gene 31662 32705 . + . ID=gene-CCO40_RS00140;Name=CCO40_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00140;old_locus_tag=CCO40_00140 NZ_CP075116.1 Protein Homology CDS 31662 32705 . + 0 ID=cds-WP_094897881.1;Parent=gene-CCO40_RS00140;Dbxref=GenBank:WP_094897881.1;Name=WP_094897881.1;Ontology_term=GO:0017004,GO:0015035,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=protein-disulfide reductase activity|0015035||IEA,metal ion binding|0046872||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=CCO40_RS00140;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_094897881.1;transl_table=11 NZ_CP075116.1 RefSeq gene 32827 34053 . + . ID=gene-CCO40_RS00145;Name=CCO40_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00145;old_locus_tag=CCO40_00145 NZ_CP075116.1 Protein Homology CDS 32827 34053 . + 0 ID=cds-WP_000809946.1;Parent=gene-CCO40_RS00145;Dbxref=GenBank:WP_000809946.1;Name=WP_000809946.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462711.1;locus_tag=CCO40_RS00145;product=YidR family protein;protein_id=WP_000809946.1;transl_table=11 NZ_CP075116.1 RefSeq gene 34055 34387 . - . ID=gene-CCO40_RS00150;Name=CCO40_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00150;old_locus_tag=CCO40_00150 NZ_CP075116.1 Protein Homology CDS 34055 34387 . - 0 ID=cds-WP_001581211.1;Parent=gene-CCO40_RS00150;Dbxref=GenBank:WP_001581211.1;Name=WP_001581211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675643.1;locus_tag=CCO40_RS00150;product=YceK/YidQ family lipoprotein;protein_id=WP_001581211.1;transl_table=11 NZ_CP075116.1 cmsearch sequence_feature 34630 34703 . + . ID=id-NZ_CP075116.1:34630..34703;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF01832,COORDINATES: profile:INFERNAL:1.1.5 NZ_CP075116.1 RefSeq gene 34697 35110 . + . ID=gene-CCO40_RS00155;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=CCO40_RS00155;old_locus_tag=CCO40_00155 NZ_CP075116.1 Protein Homology CDS 34697 35110 . + 0 ID=cds-WP_001532742.1;Parent=gene-CCO40_RS00155;Dbxref=GenBank:WP_001532742.1;Name=WP_001532742.1;Ontology_term=GO:0006950;gbkey=CDS;gene=ibpA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=CCO40_RS00155;product=small heat shock chaperone IbpA;protein_id=WP_001532742.1;transl_table=11 NZ_CP075116.1 RefSeq gene 35220 35648 . + . ID=gene-CCO40_RS00160;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=CCO40_RS00160;old_locus_tag=CCO40_00160 NZ_CP075116.1 Protein Homology CDS 35220 35648 . + 0 ID=cds-WP_001246919.1;Parent=gene-CCO40_RS00160;Dbxref=GenBank:WP_001246919.1;Name=WP_001246919.1;Ontology_term=GO:0006950;gbkey=CDS;gene=ibpB;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=CCO40_RS00160;product=small heat shock chaperone IbpB;protein_id=WP_001246919.1;transl_table=11 NZ_CP075116.1 RefSeq gene 35837 37498 . + . ID=gene-CCO40_RS00165;Name=CCO40_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00165;old_locus_tag=CCO40_00165 NZ_CP075116.1 Protein Homology CDS 35837 37498 . + 0 ID=cds-WP_001279793.1;Parent=gene-CCO40_RS00165;Dbxref=GenBank:WP_001279793.1;Name=WP_001279793.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462707.1;locus_tag=CCO40_RS00165;product=putative transporter;protein_id=WP_001279793.1;transl_table=11 NZ_CP075116.1 RefSeq gene 37942 38289 . + . ID=gene-CCO40_RS00170;Name=CCO40_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00170;old_locus_tag=CCO40_00170 NZ_CP075116.1 Protein Homology CDS 37942 38289 . + 0 ID=cds-WP_000703963.1;Parent=gene-CCO40_RS00170;Dbxref=GenBank:WP_000703963.1;Name=WP_000703963.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=CCO40_RS00170;product=YidH family protein;protein_id=WP_000703963.1;transl_table=11 NZ_CP075116.1 RefSeq gene 38279 38641 . + . ID=gene-CCO40_RS00175;Name=CCO40_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00175;old_locus_tag=CCO40_00175 NZ_CP075116.1 Protein Homology CDS 38279 38641 . + 0 ID=cds-WP_001113452.1;Parent=gene-CCO40_RS00175;Dbxref=GenBank:WP_001113452.1;Name=WP_001113452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462705.1;locus_tag=CCO40_RS00175;product=DUF202 domain-containing protein;protein_id=WP_001113452.1;transl_table=11 NZ_CP075116.1 RefSeq gene 38638 39168 . + . ID=gene-CCO40_RS00180;Name=CCO40_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00180;old_locus_tag=CCO40_00180 NZ_CP075116.1 Protein Homology CDS 38638 39168 . + 0 ID=cds-WP_000147827.1;Parent=gene-CCO40_RS00180;Dbxref=GenBank:WP_000147827.1;Name=WP_000147827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462704.1;locus_tag=CCO40_RS00180;product=SPASM domain-containing protein;protein_id=WP_000147827.1;transl_table=11 NZ_CP075116.1 RefSeq gene 39250 40572 . - . ID=gene-CCO40_RS00185;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=CCO40_RS00185;old_locus_tag=CCO40_00185 NZ_CP075116.1 Protein Homology CDS 39250 40572 . - 0 ID=cds-WP_000427986.1;Parent=gene-CCO40_RS00185;Dbxref=GenBank:WP_000427986.1;Name=WP_000427986.1;Ontology_term=GO:0008721,GO:0030170;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=CCO40_RS00185;product=D-serine ammonia-lyase;protein_id=WP_000427986.1;transl_table=11 NZ_CP075116.1 RefSeq gene 40590 41927 . - . ID=gene-CCO40_RS00190;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=CCO40_RS00190;old_locus_tag=CCO40_00190 NZ_CP075116.1 Protein Homology CDS 40590 41927 . - 0 ID=cds-WP_000543314.1;Parent=gene-CCO40_RS00190;Dbxref=GenBank:WP_000543314.1;Name=WP_000543314.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=CCO40_RS00190;product=D-serine transporter DsdX;protein_id=WP_000543314.1;transl_table=11 NZ_CP075116.1 RefSeq gene 42153 43076 . + . ID=gene-CCO40_RS00195;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=CCO40_RS00195;old_locus_tag=CCO40_00195 NZ_CP075116.1 Protein Homology CDS 42153 43076 . + 0 ID=cds-WP_001541637.1;Parent=gene-CCO40_RS00195;Dbxref=GenBank:WP_001541637.1;Name=WP_001541637.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462701.1;locus_tag=CCO40_RS00195;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_001541637.1;transl_table=11 NZ_CP075116.1 RefSeq gene 43140 44225 . + . ID=gene-CCO40_RS00200;Name=CCO40_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00200;old_locus_tag=CCO40_00200 NZ_CP075116.1 Protein Homology CDS 43140 44225 . + 0 ID=cds-WP_000238921.1;Parent=gene-CCO40_RS00200;Dbxref=GenBank:WP_000238921.1;Name=WP_000238921.1;Ontology_term=GO:0000272,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=CCO40_RS00200;product=cellulase family glycosylhydrolase;protein_id=WP_000238921.1;transl_table=11 NZ_CP075116.1 RefSeq gene 44152 45336 . - . ID=gene-CCO40_RS00205;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=CCO40_RS00205;old_locus_tag=CCO40_00205 NZ_CP075116.1 Protein Homology CDS 44152 45336 . - 0 ID=cds-WP_000828737.1;Parent=gene-CCO40_RS00205;Dbxref=GenBank:WP_000828737.1;Name=WP_000828737.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462699.1;locus_tag=CCO40_RS00205;product=multidrug efflux MFS transporter EmrD;protein_id=WP_000828737.1;transl_table=11 NZ_CP075116.1 RefSeq gene 45539 46399 . - . ID=gene-CCO40_RS00210;Name=CCO40_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00210;old_locus_tag=CCO40_00210 NZ_CP075116.1 Protein Homology CDS 45539 46399 . - 0 ID=cds-WP_001531658.1;Parent=gene-CCO40_RS00210;Dbxref=GenBank:WP_001531658.1;Name=WP_001531658.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=CCO40_RS00210;product=EamA family transporter;protein_id=WP_001531658.1;transl_table=11 NZ_CP075116.1 RefSeq gene 46492 46581 . - . ID=gene-CCO40_RS00215;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=CCO40_RS00215;old_locus_tag=CCO40_00215 NZ_CP075116.1 Protein Homology CDS 46492 46581 . - 0 ID=cds-WP_000117642.1;Parent=gene-CCO40_RS00215;Dbxref=GenBank:WP_000117642.1;Name=WP_000117642.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=CCO40_RS00215;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_000117642.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 46578 46692 . - . ID=gene-CCO40_RS00220;Name=CCO40_RS00220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS00220;old_locus_tag=CCO40_00220;pseudo=true NZ_CP075116.1 Protein Homology CDS 46578 46692 . - 0 ID=cds-CCO40_RS00220;Parent=gene-CCO40_RS00220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=CCO40_RS00220;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 47215 47313 . + . ID=gene-CCO40_RS00225;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=CCO40_RS00225;old_locus_tag=CCO40_00225 NZ_CP075116.1 Protein Homology CDS 47215 47313 . + 0 ID=cds-WP_001541152.1;Parent=gene-CCO40_RS00225;Dbxref=GenBank:WP_001541152.1;Name=WP_001541152.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462696.1;locus_tag=CCO40_RS00225;product=ilvB operon leader peptide IvbL;protein_id=WP_001541152.1;transl_table=11 NZ_CP075116.1 RefSeq gene 47420 49108 . + . ID=gene-CCO40_RS00230;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=CCO40_RS00230;old_locus_tag=CCO40_00230 NZ_CP075116.1 Protein Homology CDS 47420 49108 . + 0 ID=cds-WP_000168439.1;Parent=gene-CCO40_RS00230;Dbxref=GenBank:WP_000168439.1;Name=WP_000168439.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=CCO40_RS00230;product=acetolactate synthase large subunit;protein_id=WP_000168439.1;transl_table=11 NZ_CP075116.1 RefSeq gene 49112 49402 . + . ID=gene-CCO40_RS00235;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=CCO40_RS00235;old_locus_tag=CCO40_00235 NZ_CP075116.1 Protein Homology CDS 49112 49402 . + 0 ID=cds-WP_001171826.1;Parent=gene-CCO40_RS00235;Dbxref=GenBank:WP_001171826.1;Name=WP_001171826.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462694.1;locus_tag=CCO40_RS00235;product=acetolactate synthase small subunit;protein_id=WP_001171826.1;transl_table=11 NZ_CP075116.1 RefSeq gene 49404 50189 . - . ID=gene-CCO40_RS00240;Name=CCO40_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00240;old_locus_tag=CCO40_00240 NZ_CP075116.1 Protein Homology CDS 49404 50189 . - 0 ID=cds-WP_000448638.1;Parent=gene-CCO40_RS00240;Dbxref=GenBank:WP_000448638.1;Name=WP_000448638.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462693.1;locus_tag=CCO40_RS00240;product=DeoR family transcriptional regulator;protein_id=WP_000448638.1;transl_table=11 NZ_CP075116.1 RefSeq gene 50503 51423 . + . ID=gene-CCO40_RS00245;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=CCO40_RS00245;old_locus_tag=CCO40_00245 NZ_CP075116.1 Protein Homology CDS 50503 51423 . + 0 ID=cds-WP_000350272.1;Parent=gene-CCO40_RS00245;Dbxref=GenBank:WP_000350272.1;Name=WP_000350272.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462692.1;locus_tag=CCO40_RS00245;product=ribokinase;protein_id=WP_000350272.1;transl_table=11 NZ_CP075116.1 RefSeq gene 51454 52770 . + . ID=gene-CCO40_RS00250;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=CCO40_RS00250;old_locus_tag=CCO40_00250 NZ_CP075116.1 Protein Homology CDS 51454 52770 . + 0 ID=cds-WP_000998358.1;Parent=gene-CCO40_RS00250;Dbxref=GenBank:WP_000998358.1;Name=WP_000998358.1;Ontology_term=GO:0015756,GO:0015150,GO:0015535;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA,fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462691.1;locus_tag=CCO40_RS00250;product=L-fucose:H+ symporter permease;protein_id=WP_000998358.1;transl_table=11 NZ_CP075116.1 RefSeq gene 52782 53795 . + . ID=gene-CCO40_RS00255;Name=CCO40_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00255;old_locus_tag=CCO40_00255 NZ_CP075116.1 Protein Homology CDS 52782 53795 . + 0 ID=cds-WP_000213206.1;Parent=gene-CCO40_RS00255;Dbxref=GenBank:WP_000213206.1;Name=WP_000213206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462690.1;locus_tag=CCO40_RS00255;product=aldose 1-epimerase family protein;protein_id=WP_000213206.1;transl_table=11 NZ_CP075116.1 RefSeq gene 53870 54460 . + . ID=gene-CCO40_RS00260;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=CCO40_RS00260;old_locus_tag=CCO40_00260 NZ_CP075116.1 Protein Homology CDS 53870 54460 . + 0 ID=cds-WP_000633672.1;Parent=gene-CCO40_RS00260;Dbxref=GenBank:WP_000633672.1;Name=WP_000633672.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462689.1;locus_tag=CCO40_RS00260;product=response regulator transcription factor UhpA;protein_id=WP_000633672.1;transl_table=11 NZ_CP075116.1 RefSeq gene 54460 55962 . + . ID=gene-CCO40_RS00265;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=CCO40_RS00265;old_locus_tag=CCO40_00265 NZ_CP075116.1 Protein Homology CDS 54460 55962 . + 0 ID=cds-WP_094889130.1;Parent=gene-CCO40_RS00265;Dbxref=GenBank:WP_094889130.1;Name=WP_094889130.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462688.1;locus_tag=CCO40_RS00265;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_094889130.1;transl_table=11 NZ_CP075116.1 RefSeq gene 55972 57300 . + . ID=gene-CCO40_RS00270;Name=CCO40_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00270;old_locus_tag=CCO40_00270 NZ_CP075116.1 Protein Homology CDS 55972 57300 . + 0 ID=cds-WP_094889131.1;Parent=gene-CCO40_RS00270;Dbxref=GenBank:WP_094889131.1;Name=WP_094889131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462687.1;locus_tag=CCO40_RS00270;product=MFS transporter;protein_id=WP_094889131.1;transl_table=11 NZ_CP075116.1 RefSeq gene 57443 58834 . + . ID=gene-CCO40_RS00275;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=CCO40_RS00275;old_locus_tag=CCO40_00275 NZ_CP075116.1 Protein Homology CDS 57443 58834 . + 0 ID=cds-WP_094889132.1;Parent=gene-CCO40_RS00275;Dbxref=GenBank:WP_094889132.1;Name=WP_094889132.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=CCO40_RS00275;product=hexose-6-phosphate:phosphate antiporter UhpT;protein_id=WP_094889132.1;transl_table=11 NZ_CP075116.1 RefSeq gene 59027 59479 . + . ID=gene-CCO40_RS00280;Name=CCO40_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00280;old_locus_tag=CCO40_00280 NZ_CP075116.1 Protein Homology CDS 59027 59479 . + 0 ID=cds-WP_001519640.1;Parent=gene-CCO40_RS00280;Dbxref=GenBank:WP_001519640.1;Name=WP_001519640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=CCO40_RS00280;product=DUF1198 domain-containing protein;protein_id=WP_001519640.1;transl_table=11 NZ_CP075116.1 RefSeq gene 59832 60575 . + . ID=gene-CCO40_RS00285;Name=CCO40_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00285;old_locus_tag=CCO40_00285 NZ_CP075116.1 Protein Homology CDS 59832 60575 . + 0 ID=cds-WP_000854956.1;Parent=gene-CCO40_RS00285;Dbxref=GenBank:WP_000854956.1;Name=WP_000854956.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462684.1;locus_tag=CCO40_RS00285;product=GntR family transcriptional regulator;protein_id=WP_000854956.1;transl_table=11 NZ_CP075116.1 RefSeq gene 60593 61066 . + . ID=gene-CCO40_RS00290;Name=CCO40_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00290;old_locus_tag=CCO40_00290 NZ_CP075116.1 Protein Homology CDS 60593 61066 . + 0 ID=cds-WP_001152234.1;Parent=gene-CCO40_RS00290;Dbxref=GenBank:WP_001152234.1;Name=WP_001152234.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0034219,GO:0008982,GO:0016301,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462683.1;locus_tag=CCO40_RS00290;product=PTS sugar transporter subunit IIA;protein_id=WP_001152234.1;transl_table=11 NZ_CP075116.1 RefSeq gene 61063 61350 . + . ID=gene-CCO40_RS00295;Name=CCO40_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00295;old_locus_tag=CCO40_00295 NZ_CP075116.1 Protein Homology CDS 61063 61350 . + 0 ID=cds-WP_000041396.1;Parent=gene-CCO40_RS00295;Dbxref=GenBank:WP_000041396.1;Name=WP_000041396.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462682.1;locus_tag=CCO40_RS00295;product=PTS sugar transporter subunit IIB;protein_id=WP_000041396.1;transl_table=11 NZ_CP075116.1 RefSeq gene 61426 62784 . + . ID=gene-CCO40_RS00300;Name=CCO40_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00300;old_locus_tag=CCO40_00300 NZ_CP075116.1 Protein Homology CDS 61426 62784 . + 0 ID=cds-WP_000997825.1;Parent=gene-CCO40_RS00300;Dbxref=GenBank:WP_000997825.1;Name=WP_000997825.1;Ontology_term=GO:0009401,GO:0015796,GO:0015577,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=galactitol transmembrane transporter activity|0015577||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,galactitol transmembrane transport|0015796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462681.1;locus_tag=CCO40_RS00300;product=PTS galactitol transporter subunit IIC;protein_id=WP_000997825.1;transl_table=11 NZ_CP075116.1 RefSeq gene 62777 64261 . + . ID=gene-CCO40_RS00305;Name=CCO40_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00305;old_locus_tag=CCO40_00305 NZ_CP075116.1 Protein Homology CDS 62777 64261 . + 0 ID=cds-WP_094889133.1;Parent=gene-CCO40_RS00305;Dbxref=GenBank:WP_094889133.1;Name=WP_094889133.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462680.1;locus_tag=CCO40_RS00305;product=FGGY-family carbohydrate kinase;protein_id=WP_094889133.1;transl_table=11 NZ_CP075116.1 RefSeq gene 64324 65184 . + . ID=gene-CCO40_RS00310;Name=CCO40_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00310;old_locus_tag=CCO40_00310 NZ_CP075116.1 Protein Homology CDS 64324 65184 . + 0 ID=cds-WP_001131798.1;Parent=gene-CCO40_RS00310;Dbxref=GenBank:WP_001131798.1;Name=WP_001131798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462679.1;locus_tag=CCO40_RS00310;product=class II aldolase;protein_id=WP_001131798.1;transl_table=11 NZ_CP075116.1 RefSeq gene 65194 65463 . + . ID=gene-CCO40_RS00315;Name=CCO40_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00315;old_locus_tag=CCO40_00315 NZ_CP075116.1 Protein Homology CDS 65194 65463 . + 0 ID=cds-WP_000621109.1;Parent=gene-CCO40_RS00315;Dbxref=GenBank:WP_000621109.1;Name=WP_000621109.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462678.1;locus_tag=CCO40_RS00315;product=HPr family phosphocarrier protein;protein_id=WP_000621109.1;transl_table=11 NZ_CP075116.1 RefSeq gene 65554 65877 . - . ID=gene-CCO40_RS00320;Name=CCO40_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00320;old_locus_tag=CCO40_00320 NZ_CP075116.1 Protein Homology CDS 65554 65877 . - 0 ID=cds-WP_001274840.1;Parent=gene-CCO40_RS00320;Dbxref=GenBank:WP_001274840.1;Name=WP_001274840.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462677.1;locus_tag=CCO40_RS00320;product=helix-turn-helix domain-containing protein;protein_id=WP_001274840.1;transl_table=11 NZ_CP075116.1 RefSeq gene 65861 66220 . - . ID=gene-CCO40_RS00325;Name=CCO40_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00325;old_locus_tag=CCO40_00325 NZ_CP075116.1 Protein Homology CDS 65861 66220 . - 0 ID=cds-WP_001217954.1;Parent=gene-CCO40_RS00325;Dbxref=GenBank:WP_001217954.1;Name=WP_001217954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=CCO40_RS00325;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001217954.1;transl_table=11 NZ_CP075116.1 RefSeq gene 66436 67629 . + . ID=gene-CCO40_RS00330;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=CCO40_RS00330;old_locus_tag=CCO40_00330 NZ_CP075116.1 Protein Homology CDS 66436 67629 . + 0 ID=cds-WP_047606402.1;Parent=gene-CCO40_RS00330;Dbxref=GenBank:WP_047606402.1;Name=WP_047606402.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462675.1;locus_tag=CCO40_RS00330;product=purine ribonucleoside efflux pump NepI;protein_id=WP_047606402.1;transl_table=11 NZ_CP075116.1 RefSeq gene 67689 69071 . - . ID=gene-CCO40_RS00335;Name=gmuD;gbkey=Gene;gene=gmuD;gene_biotype=protein_coding;locus_tag=CCO40_RS00335;old_locus_tag=CCO40_00335 NZ_CP075116.1 Protein Homology CDS 67689 69071 . - 0 ID=cds-WP_094889134.1;Parent=gene-CCO40_RS00335;Dbxref=GenBank:WP_094889134.1;Name=WP_094889134.1;Ontology_term=GO:0000272,GO:0016052,GO:0008422,GO:0008706;gbkey=CDS;gene=gmuD;go_function=beta-glucosidase activity|0008422||IEA,6-phospho-beta-glucosidase activity|0008706||IEA;go_process=polysaccharide catabolic process|0000272||IEA,carbohydrate catabolic process|0016052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462674.1;locus_tag=CCO40_RS00335;product=6-phospho-beta-glucosidase GmuD;protein_id=WP_094889134.1;transl_table=11 NZ_CP075116.1 RefSeq gene 69177 69470 . - . ID=gene-CCO40_RS00340;Name=CCO40_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00340;old_locus_tag=CCO40_00340 NZ_CP075116.1 Protein Homology CDS 69177 69470 . - 0 ID=cds-WP_000824217.1;Parent=gene-CCO40_RS00340;Dbxref=GenBank:WP_000824217.1;Name=WP_000824217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462673.1;locus_tag=CCO40_RS00340;product=YicS family protein;protein_id=WP_000824217.1;transl_table=11 NZ_CP075116.1 RefSeq gene 69667 72465 . + . ID=gene-CCO40_RS00345;Name=dagR;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=CCO40_RS00345;old_locus_tag=CCO40_00345 NZ_CP075116.1 Protein Homology CDS 69667 72465 . + 0 ID=cds-WP_001252665.1;Parent=gene-CCO40_RS00345;Dbxref=GenBank:WP_001252665.1;Name=WP_001252665.1;Ontology_term=GO:0006355,GO:0009401,GO:0005524,GO:0016887;gbkey=CDS;gene=dagR;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=CCO40_RS00345;product=transcriptional regulator DagR;protein_id=WP_001252665.1;transl_table=11 NZ_CP075116.1 RefSeq gene 72684 73109 . + . ID=gene-CCO40_RS00350;Name=CCO40_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00350;old_locus_tag=CCO40_00350 NZ_CP075116.1 Protein Homology CDS 72684 73109 . + 0 ID=cds-WP_000214106.1;Parent=gene-CCO40_RS00350;Dbxref=GenBank:WP_000214106.1;Name=WP_000214106.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0034219,GO:0008982,GO:0016301,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462671.1;locus_tag=CCO40_RS00350;product=PTS sugar transporter subunit IIA;protein_id=WP_000214106.1;transl_table=11 NZ_CP075116.1 RefSeq gene 73120 73605 . + . ID=gene-CCO40_RS00355;Name=CCO40_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00355;old_locus_tag=CCO40_00355 NZ_CP075116.1 Protein Homology CDS 73120 73605 . + 0 ID=cds-WP_001284295.1;Parent=gene-CCO40_RS00355;Dbxref=GenBank:WP_001284295.1;Name=WP_001284295.1;Ontology_term=GO:0008643,GO:0009401,GO:0034219,GO:0008982,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462670.1;locus_tag=CCO40_RS00355;product=PTS sugar transporter subunit IIB;protein_id=WP_001284295.1;transl_table=11 NZ_CP075116.1 RefSeq gene 73751 74500 . + . ID=gene-CCO40_RS00360;Name=CCO40_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00360;old_locus_tag=CCO40_00360 NZ_CP075116.1 Protein Homology CDS 73751 74500 . + 0 ID=cds-WP_000380259.1;Parent=gene-CCO40_RS00360;Dbxref=GenBank:WP_000380259.1;Name=WP_000380259.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462669.1;locus_tag=CCO40_RS00360;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000380259.1;transl_table=11 NZ_CP075116.1 RefSeq gene 74497 75357 . + . ID=gene-CCO40_RS00365;Name=CCO40_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00365;old_locus_tag=CCO40_00365 NZ_CP075116.1 Protein Homology CDS 74497 75357 . + 0 ID=cds-WP_001526325.1;Parent=gene-CCO40_RS00365;Dbxref=GenBank:WP_001526325.1;Name=WP_001526325.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=CCO40_RS00365;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_001526325.1;transl_table=11 NZ_CP075116.1 RefSeq gene 75361 76470 . + . ID=gene-CCO40_RS00370;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=CCO40_RS00370;old_locus_tag=CCO40_00370 NZ_CP075116.1 Protein Homology CDS 75361 76470 . + 0 ID=cds-WP_000188463.1;Parent=gene-CCO40_RS00370;Dbxref=GenBank:WP_000188463.1;Name=WP_000188463.1;Ontology_term=GO:0016829;gbkey=CDS;gene=dgaE;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462667.1;locus_tag=CCO40_RS00370;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=WP_000188463.1;transl_table=11 NZ_CP075116.1 RefSeq gene 76457 77200 . + . ID=gene-CCO40_RS00375;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=CCO40_RS00375;old_locus_tag=CCO40_00375 NZ_CP075116.1 Protein Homology CDS 76457 77200 . + 0 ID=cds-WP_001186146.1;Parent=gene-CCO40_RS00375;Dbxref=GenBank:WP_001186146.1;Name=WP_001186146.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=CCO40_RS00375;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_001186146.1;transl_table=11 NZ_CP075116.1 RefSeq gene 77436 78377 . + . ID=gene-CCO40_RS00380;Name=CCO40_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00380;old_locus_tag=CCO40_00380 NZ_CP075116.1 Protein Homology CDS 77436 78377 . + 0 ID=cds-WP_000749540.1;Parent=gene-CCO40_RS00380;Dbxref=GenBank:WP_000749540.1;Name=WP_000749540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462665.1;locus_tag=CCO40_RS00380;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000749540.1;transl_table=11 NZ_CP075116.1 RefSeq gene 78420 79322 . - . ID=gene-CCO40_RS00385;Name=CCO40_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00385;old_locus_tag=CCO40_00385 NZ_CP075116.1 Protein Homology CDS 78420 79322 . - 0 ID=cds-WP_001682335.1;Parent=gene-CCO40_RS00385;Dbxref=GenBank:WP_001682335.1;Name=WP_001682335.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462664.1;locus_tag=CCO40_RS00385;product=EamA family transporter;protein_id=WP_001682335.1;transl_table=11 NZ_CP075116.1 RefSeq gene 79831 80526 . + . ID=gene-CCO40_RS00390;Name=CCO40_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00390;old_locus_tag=CCO40_00390 NZ_CP075116.1 Protein Homology CDS 79831 80526 . + 0 ID=cds-WP_000392694.1;Parent=gene-CCO40_RS00390;Dbxref=GenBank:WP_000392694.1;Name=WP_000392694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462663.1;locus_tag=CCO40_RS00390;product=MgtC family protein;protein_id=WP_000392694.1;transl_table=11 NZ_CP075116.1 RefSeq gene 80746 83472 . + . ID=gene-CCO40_RS00395;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=CCO40_RS00395;old_locus_tag=CCO40_00395 NZ_CP075116.1 Protein Homology CDS 80746 83472 . + 0 ID=cds-WP_000131284.1;Parent=gene-CCO40_RS00395;Dbxref=GenBank:WP_000131284.1;Name=WP_000131284.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=CCO40_RS00395;product=magnesium-translocating P-type ATPase;protein_id=WP_000131284.1;transl_table=11 NZ_CP075116.1 RefSeq gene 83494 83586 . + . ID=gene-CCO40_RS00400;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=CCO40_RS00400;old_locus_tag=CCO40_00400 NZ_CP075116.1 Protein Homology CDS 83494 83586 . + 0 ID=cds-WP_001082117.1;Parent=gene-CCO40_RS00400;Dbxref=GenBank:WP_001082117.1;Name=WP_001082117.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082117.1;locus_tag=CCO40_RS00400;product=protein MgtR;protein_id=WP_001082117.1;transl_table=11 NZ_CP075116.1 RefSeq gene 83599 83685 . + . ID=gene-CCO40_RS22400;Name=mgtU;gbkey=Gene;gene=mgtU;gene_biotype=protein_coding;locus_tag=CCO40_RS22400 NZ_CP075116.1 Protein Homology CDS 83599 83685 . + 0 ID=cds-WP_252515021.1;Parent=gene-CCO40_RS22400;Dbxref=GenBank:WP_252515021.1;Name=WP_252515021.1;gbkey=CDS;gene=mgtU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_251009859.1;locus_tag=CCO40_RS22400;product=magnesium transporter protection protein MgtU;protein_id=WP_252515021.1;transl_table=11 NZ_CP075116.1 RefSeq gene 83787 84266 . + . ID=gene-CCO40_RS00405;Name=cigR;gbkey=Gene;gene=cigR;gene_biotype=protein_coding;locus_tag=CCO40_RS00405;old_locus_tag=CCO40_00405 NZ_CP075116.1 Protein Homology CDS 83787 84266 . + 0 ID=cds-WP_001065324.1;Parent=gene-CCO40_RS00405;Dbxref=GenBank:WP_001065324.1;Name=WP_001065324.1;gbkey=CDS;gene=cigR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462661.1;locus_tag=CCO40_RS00405;product=anti-virulence regulatory inner membrane protein CigR;protein_id=WP_001065324.1;transl_table=11 NZ_CP075116.1 RefSeq gene 84495 85175 . - . ID=gene-CCO40_RS00410;Name=CCO40_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00410;old_locus_tag=CCO40_00410 NZ_CP075116.1 Protein Homology CDS 84495 85175 . - 0 ID=cds-WP_000106461.1;Parent=gene-CCO40_RS00410;Dbxref=GenBank:WP_000106461.1;Name=WP_000106461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462660.1;locus_tag=CCO40_RS00410;product=isochorismatase family protein;protein_id=WP_000106461.1;transl_table=11 NZ_CP075116.1 RefSeq gene 85959 86816 . + . ID=gene-CCO40_RS00420;Name=CCO40_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00420;old_locus_tag=CCO40_00420 NZ_CP075116.1 Protein Homology CDS 85959 86816 . + 0 ID=cds-WP_001278062.1;Parent=gene-CCO40_RS00420;Dbxref=GenBank:WP_001278062.1;Name=WP_001278062.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=CCO40_RS00420;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001278062.1;transl_table=11 NZ_CP075116.1 RefSeq gene 86809 87291 . + . ID=gene-CCO40_RS00425;Name=CCO40_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00425;old_locus_tag=CCO40_00425 NZ_CP075116.1 Protein Homology CDS 86809 87291 . + 0 ID=cds-WP_000516573.1;Parent=gene-CCO40_RS00425;Dbxref=GenBank:WP_000516573.1;Name=WP_000516573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000516874.1;locus_tag=CCO40_RS00425;product=YqeJ family protein;protein_id=WP_000516573.1;transl_table=11 NZ_CP075116.1 RefSeq gene 87386 90253 . - . ID=gene-CCO40_RS00430;Name=misL;gbkey=Gene;gene=misL;gene_biotype=protein_coding;locus_tag=CCO40_RS00430;old_locus_tag=CCO40_00430 NZ_CP075116.1 Protein Homology CDS 87386 90253 . - 0 ID=cds-WP_001143053.1;Parent=gene-CCO40_RS00430;Dbxref=GenBank:WP_001143053.1;Name=WP_001143053.1;gbkey=CDS;gene=misL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=CCO40_RS00430;product=intestinal colonization autotransporter adhesin MisL;protein_id=WP_001143053.1;transl_table=11 NZ_CP075116.1 RefSeq gene 90328 90945 . - . ID=gene-CCO40_RS00435;Name=CCO40_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00435;old_locus_tag=CCO40_00435 NZ_CP075116.1 Protein Homology CDS 90328 90945 . - 0 ID=cds-WP_000984806.1;Parent=gene-CCO40_RS00435;Dbxref=GenBank:WP_000984806.1;Name=WP_000984806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462655.1;locus_tag=CCO40_RS00435;product=helix-turn-helix transcriptional regulator;protein_id=WP_000984806.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 91959 92090 . + . ID=gene-CCO40_RS00440;Name=CCO40_RS00440;end_range=92090,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS00440;old_locus_tag=CCO40_00440;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 91959 92090 . + 0 ID=cds-CCO40_RS00440;Parent=gene-CCO40_RS00440;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=92090,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611920.1;locus_tag=CCO40_RS00440;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 92244 93281 . - . ID=gene-CCO40_RS00445;Name=rhuM;gbkey=Gene;gene=rhuM;gene_biotype=protein_coding;locus_tag=CCO40_RS00445;old_locus_tag=CCO40_00445 NZ_CP075116.1 Protein Homology CDS 92244 93281 . - 0 ID=cds-WP_000774139.1;Parent=gene-CCO40_RS00445;Dbxref=GenBank:WP_000774139.1;Name=WP_000774139.1;gbkey=CDS;gene=rhuM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462654.1;locus_tag=CCO40_RS00445;product=virulence protein RhuM;protein_id=WP_000774139.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 93369 93785 . - . ID=gene-CCO40_RS00450;Name=CCO40_RS00450;end_range=93785,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS00450;old_locus_tag=CCO40_00450;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 93369 93785 . - 0 ID=cds-CCO40_RS00450;Parent=gene-CCO40_RS00450;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=93785,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227719.1;locus_tag=CCO40_RS00450;partial=true;product=DUF4942 domain-containing protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 93815 95005 . - . ID=gene-CCO40_RS00455;Name=CCO40_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00455;old_locus_tag=CCO40_00455 NZ_CP075116.1 Protein Homology CDS 93815 95005 . - 0 ID=cds-WP_001541628.1;Parent=gene-CCO40_RS00455;Dbxref=GenBank:WP_001541628.1;Name=WP_001541628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462652.1;locus_tag=CCO40_RS00455;product=AAA family ATPase SugR;protein_id=WP_001541628.1;transl_table=11 NZ_CP075116.1 RefSeq gene 95683 96027 . + . ID=gene-CCO40_RS00465;Name=CCO40_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00465;old_locus_tag=CCO40_00465 NZ_CP075116.1 Protein Homology CDS 95683 96027 . + 0 ID=cds-WP_000120776.1;Parent=gene-CCO40_RS00465;Dbxref=GenBank:WP_000120776.1;Name=WP_000120776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462651.1;locus_tag=CCO40_RS00465;product=hypothetical protein;protein_id=WP_000120776.1;transl_table=11 NZ_CP075116.1 RefSeq gene 96344 96438 . - . ID=gene-CCO40_RS00470;Name=CCO40_RS00470;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS00470;old_locus_tag=CCO40_00470 NZ_CP075116.1 tRNAscan-SE tRNA 96344 96438 . - . ID=rna-CCO40_RS00470;Parent=gene-CCO40_RS00470;anticodon=(pos:complement(96402..96404));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS00470;product=tRNA-Sec NZ_CP075116.1 tRNAscan-SE exon 96344 96438 . - . ID=exon-CCO40_RS00470-1;Parent=rna-CCO40_RS00470;anticodon=(pos:complement(96402..96404));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS00470;product=tRNA-Sec NZ_CP075116.1 RefSeq gene 96726 98108 . + . ID=gene-CCO40_RS00475;Name=CCO40_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00475;old_locus_tag=CCO40_00475 NZ_CP075116.1 Protein Homology CDS 96726 98108 . + 0 ID=cds-WP_000834259.1;Parent=gene-CCO40_RS00475;Dbxref=GenBank:WP_000834259.1;Name=WP_000834259.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462650.1;locus_tag=CCO40_RS00475;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_000834259.1;transl_table=11 NZ_CP075116.1 RefSeq gene 98120 100438 . + . ID=gene-CCO40_RS00480;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=CCO40_RS00480;old_locus_tag=CCO40_00480 NZ_CP075116.1 Protein Homology CDS 98120 100438 . + 0 ID=cds-WP_000702987.1;Parent=gene-CCO40_RS00480;Dbxref=GenBank:WP_000702987.1;Name=WP_000702987.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462649.1;locus_tag=CCO40_RS00480;product=alpha-xylosidase;protein_id=WP_000702987.1;transl_table=11 NZ_CP075116.1 RefSeq gene 100541 102250 . - . ID=gene-CCO40_RS00485;Name=CCO40_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00485;old_locus_tag=CCO40_00485 NZ_CP075116.1 Protein Homology CDS 100541 102250 . - 0 ID=cds-WP_000766669.1;Parent=gene-CCO40_RS00485;Dbxref=GenBank:WP_000766669.1;Name=WP_000766669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=CCO40_RS00485;product=AsmA family protein;protein_id=WP_000766669.1;transl_table=11 NZ_CP075116.1 RefSeq gene 102371 103762 . - . ID=gene-CCO40_RS00490;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=CCO40_RS00490;old_locus_tag=CCO40_00490 NZ_CP075116.1 Protein Homology CDS 102371 103762 . - 0 ID=cds-WP_000115428.1;Parent=gene-CCO40_RS00490;Dbxref=GenBank:WP_000115428.1;Name=WP_000115428.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=CCO40_RS00490;product=xanthine/proton symporter XanP;protein_id=WP_000115428.1;transl_table=11 NZ_CP075116.1 RefSeq gene 103990 105195 . + . ID=gene-CCO40_RS00495;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=CCO40_RS00495;old_locus_tag=CCO40_00495 NZ_CP075116.1 Protein Homology CDS 103990 105195 . + 0 ID=cds-WP_000462256.1;Parent=gene-CCO40_RS00495;Dbxref=GenBank:WP_000462256.1;Name=WP_000462256.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462646.1;locus_tag=CCO40_RS00495;product=sodium/glutamate symporter;protein_id=WP_000462256.1;transl_table=11 NZ_CP075116.1 RefSeq gene 105198 106049 . + . ID=gene-CCO40_RS00500;Name=CCO40_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00500;old_locus_tag=CCO40_00500 NZ_CP075116.1 Protein Homology CDS 105198 106049 . + 0 ID=cds-WP_000745468.1;Parent=gene-CCO40_RS00500;Dbxref=GenBank:WP_000745468.1;Name=WP_000745468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462645.1;locus_tag=CCO40_RS00500;product=hypothetical protein;protein_id=WP_000745468.1;transl_table=11 NZ_CP075116.1 RefSeq gene 106052 108133 . - . ID=gene-CCO40_RS00505;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=CCO40_RS00505;old_locus_tag=CCO40_00505 NZ_CP075116.1 Protein Homology CDS 106052 108133 . - 0 ID=cds-WP_000016752.1;Parent=gene-CCO40_RS00505;Dbxref=GenBank:WP_000016752.1;Name=WP_000016752.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=CCO40_RS00505;product=ATP-dependent DNA helicase RecG;protein_id=WP_000016752.1;transl_table=11 NZ_CP075116.1 RefSeq gene 108139 108828 . - . ID=gene-CCO40_RS00510;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=CCO40_RS00510;old_locus_tag=CCO40_00510 NZ_CP075116.1 Protein Homology CDS 108139 108828 . - 0 ID=cds-WP_001068436.1;Parent=gene-CCO40_RS00510;Dbxref=GenBank:WP_001068436.1;Name=WP_001068436.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O-ribose)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=CCO40_RS00510;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_001068436.1;transl_table=11 NZ_CP075116.1 RefSeq gene 108833 110944 . - . ID=gene-CCO40_RS00515;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=CCO40_RS00515;old_locus_tag=CCO40_00515 NZ_CP075116.1 Protein Homology CDS 108833 110944 . - 0 ID=cds-WP_000280481.1;Parent=gene-CCO40_RS00515;Dbxref=GenBank:WP_000280481.1;Name=WP_000280481.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=CCO40_RS00515;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280481.1;transl_table=11 NZ_CP075116.1 RefSeq gene 110963 111238 . - . ID=gene-CCO40_RS00520;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=CCO40_RS00520;old_locus_tag=CCO40_00520 NZ_CP075116.1 Protein Homology CDS 110963 111238 . - 0 ID=cds-WP_000135058.1;Parent=gene-CCO40_RS00520;Dbxref=GenBank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=CCO40_RS00520;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11 NZ_CP075116.1 RefSeq gene 111293 111916 . - . ID=gene-CCO40_RS00525;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=CCO40_RS00525;old_locus_tag=CCO40_00525 NZ_CP075116.1 Protein Homology CDS 111293 111916 . - 0 ID=cds-WP_000046966.1;Parent=gene-CCO40_RS00525;Dbxref=GenBank:WP_000046966.1;Name=WP_000046966.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=CCO40_RS00525;product=guanylate kinase;protein_id=WP_000046966.1;transl_table=11 NZ_CP075116.1 RefSeq gene 112173 113858 . + . ID=gene-CCO40_RS00530;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=CCO40_RS00530;old_locus_tag=CCO40_00530 NZ_CP075116.1 Protein Homology CDS 112173 113858 . + 0 ID=cds-WP_001241824.1;Parent=gene-CCO40_RS00530;Dbxref=GenBank:WP_001241824.1;Name=WP_001241824.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=CCO40_RS00530;product=NAD-dependent DNA ligase LigB;protein_id=WP_001241824.1;transl_table=11 NZ_CP075116.1 RefSeq gene 113855 114472 . - . ID=gene-CCO40_RS00535;Name=CCO40_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00535;old_locus_tag=CCO40_00535 NZ_CP075116.1 Protein Homology CDS 113855 114472 . - 0 ID=cds-WP_000924334.1;Parent=gene-CCO40_RS00535;Dbxref=GenBank:WP_000924334.1;Name=WP_000924334.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=CCO40_RS00535;product=trimeric intracellular cation channel family protein;protein_id=WP_000924334.1;transl_table=11 NZ_CP075116.1 RefSeq gene 114723 115604 . - . ID=gene-CCO40_RS00540;Name=CCO40_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00540;old_locus_tag=CCO40_00540 NZ_CP075116.1 Protein Homology CDS 114723 115604 . - 0 ID=cds-WP_001082969.1;Parent=gene-CCO40_RS00540;Dbxref=GenBank:WP_001082969.1;Name=WP_001082969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462637.1;locus_tag=CCO40_RS00540;product=HARLDQ motif MBL-fold protein;protein_id=WP_001082969.1;transl_table=11 NZ_CP075116.1 RefSeq gene 115678 116580 . + . ID=gene-CCO40_RS00545;Name=CCO40_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00545;old_locus_tag=CCO40_00545 NZ_CP075116.1 Protein Homology CDS 115678 116580 . + 0 ID=cds-WP_001050866.1;Parent=gene-CCO40_RS00545;Dbxref=GenBank:WP_001050866.1;Name=WP_001050866.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=CCO40_RS00545;product=LysR family transcriptional regulator;protein_id=WP_001050866.1;transl_table=11 NZ_CP075116.1 RefSeq gene 116630 117493 . - . ID=gene-CCO40_RS00550;Name=CCO40_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00550;old_locus_tag=CCO40_00550 NZ_CP075116.1 Protein Homology CDS 116630 117493 . - 0 ID=cds-WP_000621352.1;Parent=gene-CCO40_RS00550;Dbxref=GenBank:WP_000621352.1;Name=WP_000621352.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=CCO40_RS00550;product=YicC/YloC family endoribonuclease;protein_id=WP_000621352.1;transl_table=11 NZ_CP075116.1 RefSeq gene 117619 118335 . + . ID=gene-CCO40_RS00555;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=CCO40_RS00555;old_locus_tag=CCO40_00555 NZ_CP075116.1 Protein Homology CDS 117619 118335 . + 0 ID=cds-WP_001247078.1;Parent=gene-CCO40_RS00555;Dbxref=GenBank:WP_001247078.1;Name=WP_001247078.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=CCO40_RS00555;product=ribonuclease PH;protein_id=WP_001247078.1;transl_table=11 NZ_CP075116.1 RefSeq gene 118414 119055 . + . ID=gene-CCO40_RS00560;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=CCO40_RS00560;old_locus_tag=CCO40_00560 NZ_CP075116.1 Protein Homology CDS 118414 119055 . + 0 ID=cds-WP_000806167.1;Parent=gene-CCO40_RS00560;Dbxref=GenBank:WP_000806167.1;Name=WP_000806167.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=CCO40_RS00560;product=orotate phosphoribosyltransferase;protein_id=WP_000806167.1;transl_table=11 NZ_CP075116.1 RefSeq gene 119133 119729 . - . ID=gene-CCO40_RS00565;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=CCO40_RS00565;old_locus_tag=CCO40_00565 NZ_CP075116.1 Protein Homology CDS 119133 119729 . - 0 ID=cds-WP_000818607.1;Parent=gene-CCO40_RS00565;Dbxref=GenBank:WP_000818607.1;Name=WP_000818607.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=CCO40_RS00565;product=nucleoid occlusion factor SlmA;protein_id=WP_000818607.1;transl_table=11 NZ_CP075116.1 RefSeq gene 119837 120295 . - . ID=gene-CCO40_RS00570;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=CCO40_RS00570;old_locus_tag=CCO40_00570 NZ_CP075116.1 Protein Homology CDS 119837 120295 . - 0 ID=cds-WP_000976078.1;Parent=gene-CCO40_RS00570;Dbxref=GenBank:WP_000976078.1;Name=WP_000976078.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=CCO40_RS00570;product=dUTP diphosphatase;protein_id=WP_000976078.1;transl_table=11 NZ_CP075116.1 RefSeq gene 120273 121493 . - . ID=gene-CCO40_RS00575;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=CCO40_RS00575;old_locus_tag=CCO40_00575 NZ_CP075116.1 Protein Homology CDS 120273 121493 . - 0 ID=cds-WP_000050168.1;Parent=gene-CCO40_RS00575;Dbxref=GenBank:WP_000050168.1;Name=WP_000050168.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=CCO40_RS00575;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_000050168.1;transl_table=11 NZ_CP075116.1 RefSeq gene 121669 122334 . + . ID=gene-CCO40_RS00580;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=CCO40_RS00580;old_locus_tag=CCO40_00580 NZ_CP075116.1 Protein Homology CDS 121669 122334 . + 0 ID=cds-WP_000380129.1;Parent=gene-CCO40_RS00580;Dbxref=GenBank:WP_000380129.1;Name=WP_000380129.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462629.1;locus_tag=CCO40_RS00580;product=RadC family protein;protein_id=WP_000380129.1;transl_table=11 NZ_CP075116.1 RefSeq gene 122552 122788 . + . ID=gene-CCO40_RS00585;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=CCO40_RS00585;old_locus_tag=CCO40_00585 NZ_CP075116.1 Protein Homology CDS 122552 122788 . + 0 ID=cds-WP_001519051.1;Parent=gene-CCO40_RS00585;Dbxref=GenBank:WP_001519051.1;Name=WP_001519051.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=CCO40_RS00585;product=50S ribosomal protein L28;protein_id=WP_001519051.1;transl_table=11 NZ_CP075116.1 RefSeq gene 122809 122976 . + . ID=gene-CCO40_RS00590;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CCO40_RS00590;old_locus_tag=CCO40_00590 NZ_CP075116.1 Protein Homology CDS 122809 122976 . + 0 ID=cds-WP_001051798.1;Parent=gene-CCO40_RS00590;Dbxref=GenBank:WP_001051798.1;Name=WP_001051798.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=CCO40_RS00590;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11 NZ_CP075116.1 RefSeq gene 123074 123883 . + . ID=gene-CCO40_RS00595;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=CCO40_RS00595;old_locus_tag=CCO40_00595 NZ_CP075116.1 Protein Homology CDS 123074 123883 . + 0 ID=cds-WP_001114508.1;Parent=gene-CCO40_RS00595;Dbxref=GenBank:WP_001114508.1;Name=WP_001114508.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462626.1;locus_tag=CCO40_RS00595;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_001114508.1;transl_table=11 NZ_CP075116.1 RefSeq gene 123911 124390 . - . ID=gene-CCO40_RS00600;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=CCO40_RS00600;old_locus_tag=CCO40_00600 NZ_CP075116.1 Protein Homology CDS 123911 124390 . - 0 ID=cds-WP_001171890.1;Parent=gene-CCO40_RS00600;Dbxref=GenBank:WP_001171890.1;Name=WP_001171890.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462625.1;locus_tag=CCO40_RS00600;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171890.1;transl_table=11 NZ_CP075116.1 RefSeq gene 124399 125676 . - . ID=gene-CCO40_RS00605;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=CCO40_RS00605;old_locus_tag=CCO40_00605 NZ_CP075116.1 Protein Homology CDS 124399 125676 . - 0 ID=cds-WP_000891582.1;Parent=gene-CCO40_RS00605;Dbxref=GenBank:WP_000891582.1;Name=WP_000891582.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462624.1;locus_tag=CCO40_RS00605;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_000891582.1;transl_table=11 NZ_CP075116.1 RefSeq gene 126085 127155 . + . ID=gene-CCO40_RS00610;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=CCO40_RS00610;old_locus_tag=CCO40_00610 NZ_CP075116.1 Protein Homology CDS 126085 127155 . + 0 ID=cds-WP_001526672.1;Parent=gene-CCO40_RS00610;Dbxref=GenBank:WP_001526672.1;Name=WP_001526672.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=CCO40_RS00610;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_001526672.1;transl_table=11 NZ_CP075116.1 RefSeq gene 127152 128276 . + . ID=gene-CCO40_RS00615;Name=CCO40_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00615;old_locus_tag=CCO40_00615 NZ_CP075116.1 Protein Homology CDS 127152 128276 . + 0 ID=cds-WP_001261577.1;Parent=gene-CCO40_RS00615;Dbxref=GenBank:WP_001261577.1;Name=WP_001261577.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462622.1;locus_tag=CCO40_RS00615;product=glycosyltransferase family 4 protein;protein_id=WP_001261577.1;transl_table=11 NZ_CP075116.1 RefSeq gene 128269 129066 . + . ID=gene-CCO40_RS00620;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=CCO40_RS00620;old_locus_tag=CCO40_00620 NZ_CP075116.1 Protein Homology CDS 128269 129066 . + 0 ID=cds-WP_000229825.1;Parent=gene-CCO40_RS00620;Dbxref=GenBank:WP_000229825.1;Name=WP_000229825.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462621.1;locus_tag=CCO40_RS00620;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_000229825.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 129122 129283 . + . ID=gene-CCO40_RS00625;Name=CCO40_RS00625;end_range=129283,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS00625;old_locus_tag=CCO40_00625;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 129122 129283 . + 0 ID=cds-CCO40_RS00625;Parent=gene-CCO40_RS00625;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=129283,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280096.1;locus_tag=CCO40_RS00625;partial=true;product=glycosyltransferase family 8 protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 129401 130480 . + . ID=gene-CCO40_RS00630;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=rfaB;locus_tag=CCO40_RS00630;old_locus_tag=CCO40_00630 NZ_CP075116.1 Protein Homology CDS 129401 130480 . + 0 ID=cds-WP_000683980.1;Parent=gene-CCO40_RS00630;Dbxref=GenBank:WP_000683980.1;Name=WP_000683980.1;gbkey=CDS;gene=waaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462619.1;locus_tag=CCO40_RS00630;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=WP_000683980.1;transl_table=11 NZ_CP075116.1 RefSeq gene 130486 131499 . + . ID=gene-CCO40_RS00635;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=CCO40_RS00635;old_locus_tag=CCO40_00635 NZ_CP075116.1 Protein Homology CDS 130486 131499 . + 0 ID=cds-WP_000088479.1;Parent=gene-CCO40_RS00635;Dbxref=GenBank:WP_000088479.1;Name=WP_000088479.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462618.1;locus_tag=CCO40_RS00635;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_000088479.1;transl_table=11 NZ_CP075116.1 RefSeq gene 131517 132527 . + . ID=gene-CCO40_RS00640;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=CCO40_RS00640;old_locus_tag=CCO40_00640 NZ_CP075116.1 Protein Homology CDS 131517 132527 . + 0 ID=cds-WP_000376865.1;Parent=gene-CCO40_RS00640;Dbxref=GenBank:WP_000376865.1;Name=WP_000376865.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=CCO40_RS00640;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;protein_id=WP_000376865.1;transl_table=11 NZ_CP075116.1 RefSeq gene 132550 133248 . + . ID=gene-CCO40_RS00645;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=CCO40_RS00645;old_locus_tag=CCO40_00645 NZ_CP075116.1 Protein Homology CDS 132550 133248 . + 0 ID=cds-WP_000582809.1;Parent=gene-CCO40_RS00645;Dbxref=GenBank:WP_000582809.1;Name=WP_000582809.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462616.1;locus_tag=CCO40_RS00645;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_000582809.1;transl_table=11 NZ_CP075116.1 RefSeq gene 133398 134207 . + . ID=gene-CCO40_RS00650;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=protein_coding;locus_tag=CCO40_RS00650;old_locus_tag=CCO40_00650 NZ_CP075116.1 Protein Homology CDS 133398 134207 . + 0 ID=cds-WP_000536012.1;Parent=gene-CCO40_RS00650;Dbxref=GenBank:WP_000536012.1;Name=WP_000536012.1;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462615.1;locus_tag=CCO40_RS00650;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;protein_id=WP_000536012.1;transl_table=11 NZ_CP075116.1 RefSeq gene 134308 135453 . + . ID=gene-CCO40_RS00655;Name=CCO40_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00655;old_locus_tag=CCO40_00655 NZ_CP075116.1 Protein Homology CDS 134308 135453 . + 0 ID=cds-WP_000591818.1;Parent=gene-CCO40_RS00655;Dbxref=GenBank:WP_000591818.1;Name=WP_000591818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462614.1;locus_tag=CCO40_RS00655;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WP_000591818.1;transl_table=11 NZ_CP075116.1 RefSeq gene 135510 136724 . - . ID=gene-CCO40_RS00660;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=CCO40_RS00660;old_locus_tag=CCO40_00660 NZ_CP075116.1 Protein Homology CDS 135510 136724 . - 0 ID=cds-WP_000958458.1;Parent=gene-CCO40_RS00660;Dbxref=GenBank:WP_000958458.1;Name=WP_000958458.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462613.1;locus_tag=CCO40_RS00660;product=O-antigen ligase RfaL;protein_id=WP_000958458.1;transl_table=11 NZ_CP075116.1 RefSeq gene 136764 137717 . - . ID=gene-CCO40_RS00665;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=CCO40_RS00665;old_locus_tag=CCO40_00665 NZ_CP075116.1 Protein Homology CDS 136764 137717 . - 0 ID=cds-WP_001264604.1;Parent=gene-CCO40_RS00665;Dbxref=GenBank:WP_001264604.1;Name=WP_001264604.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462612.1;locus_tag=CCO40_RS00665;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_001264604.1;transl_table=11 NZ_CP075116.1 RefSeq gene 137717 138763 . - . ID=gene-CCO40_RS00670;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=CCO40_RS00670;old_locus_tag=CCO40_00670 NZ_CP075116.1 Protein Homology CDS 137717 138763 . - 0 ID=cds-WP_000699196.1;Parent=gene-CCO40_RS00670;Dbxref=GenBank:WP_000699196.1;Name=WP_000699196.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462611.1;locus_tag=CCO40_RS00670;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_000699196.1;transl_table=11 NZ_CP075116.1 RefSeq gene 138766 139698 . - . ID=gene-CCO40_RS00675;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=CCO40_RS00675;old_locus_tag=CCO40_00675 NZ_CP075116.1 Protein Homology CDS 138766 139698 . - 0 ID=cds-WP_000587771.1;Parent=gene-CCO40_RS00675;Dbxref=GenBank:WP_000587771.1;Name=WP_000587771.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=CCO40_RS00675;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_000587771.1;transl_table=11 NZ_CP075116.1 RefSeq gene 139901 141097 . + . ID=gene-CCO40_RS00680;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=CCO40_RS00680;old_locus_tag=CCO40_00680 NZ_CP075116.1 Protein Homology CDS 139901 141097 . + 0 ID=cds-WP_001213790.1;Parent=gene-CCO40_RS00680;Dbxref=GenBank:WP_001213790.1;Name=WP_001213790.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=CCO40_RS00680;product=glycine C-acetyltransferase;protein_id=WP_001213790.1;transl_table=11 NZ_CP075116.1 RefSeq gene 141107 142132 . + . ID=gene-CCO40_RS00685;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=CCO40_RS00685;old_locus_tag=CCO40_00685 NZ_CP075116.1 Protein Homology CDS 141107 142132 . + 0 ID=cds-WP_000645990.1;Parent=gene-CCO40_RS00685;Dbxref=GenBank:WP_000645990.1;Name=WP_000645990.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=CCO40_RS00685;product=L-threonine 3-dehydrogenase;protein_id=WP_000645990.1;transl_table=11 NZ_CP075116.1 RefSeq gene 142626 143660 . + . ID=gene-CCO40_RS00690;Name=CCO40_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00690;old_locus_tag=CCO40_00690 NZ_CP075116.1 Protein Homology CDS 142626 143660 . + 0 ID=cds-WP_000798206.1;Parent=gene-CCO40_RS00690;Dbxref=GenBank:WP_000798206.1;Name=WP_000798206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462607.1;locus_tag=CCO40_RS00690;product=glycosyltransferase;protein_id=WP_000798206.1;transl_table=11 NZ_CP075116.1 RefSeq gene 143647 144609 . - . ID=gene-CCO40_RS00695;Name=CCO40_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00695;old_locus_tag=CCO40_00695 NZ_CP075116.1 Protein Homology CDS 143647 144609 . - 0 ID=cds-WP_001135518.1;Parent=gene-CCO40_RS00695;Dbxref=GenBank:WP_001135518.1;Name=WP_001135518.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462606.1;locus_tag=CCO40_RS00695;product=divergent polysaccharide deacetylase family protein;protein_id=WP_001135518.1;transl_table=11 NZ_CP075116.1 RefSeq gene 144613 145872 . - . ID=gene-CCO40_RS00700;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=CCO40_RS00700;old_locus_tag=CCO40_00700 NZ_CP075116.1 Protein Homology CDS 144613 145872 . - 0 ID=cds-WP_234146447.1;Parent=gene-CCO40_RS00700;Dbxref=GenBank:WP_234146447.1;Name=WP_234146447.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=CCO40_RS00700;product=murein hydrolase activator EnvC;protein_id=WP_234146447.1;transl_table=11 NZ_CP075116.1 RefSeq gene 145906 147450 . - . ID=gene-CCO40_RS00705;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=CCO40_RS00705;old_locus_tag=CCO40_00705 NZ_CP075116.1 Protein Homology CDS 145906 147450 . - 0 ID=cds-WP_000116576.1;Parent=gene-CCO40_RS00705;Dbxref=GenBank:WP_000116576.1;Name=WP_000116576.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=CCO40_RS00705;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_000116576.1;transl_table=11 NZ_CP075116.1 RefSeq gene 147698 148129 . + . ID=gene-CCO40_RS00710;Name=CCO40_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00710;old_locus_tag=CCO40_00710 NZ_CP075116.1 Protein Homology CDS 147698 148129 . + 0 ID=cds-WP_001156179.1;Parent=gene-CCO40_RS00710;Dbxref=GenBank:WP_001156179.1;Name=WP_001156179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462603.1;locus_tag=CCO40_RS00710;product=rhodanese-like domain-containing protein;protein_id=WP_001156179.1;transl_table=11 NZ_CP075116.1 RefSeq gene 148215 148466 . + . ID=gene-CCO40_RS00715;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=CCO40_RS00715;old_locus_tag=CCO40_00715 NZ_CP075116.1 Protein Homology CDS 148215 148466 . + 0 ID=cds-WP_001273795.1;Parent=gene-CCO40_RS00715;Dbxref=GenBank:WP_001273795.1;Name=WP_001273795.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462602.1;locus_tag=CCO40_RS00715;product=glutaredoxin 3;protein_id=WP_001273795.1;transl_table=11 NZ_CP075116.1 RefSeq gene 148510 148977 . + . ID=gene-CCO40_RS00720;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=CCO40_RS00720;old_locus_tag=CCO40_00720 NZ_CP075116.1 Protein Homology CDS 148510 148977 . + 0 ID=cds-WP_000003370.1;Parent=gene-CCO40_RS00720;Dbxref=GenBank:WP_000003370.1;Name=WP_000003370.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=CCO40_RS00720;product=protein-export chaperone SecB;protein_id=WP_000003370.1;transl_table=11 NZ_CP075116.1 RefSeq gene 148977 149996 . + . ID=gene-CCO40_RS00725;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=CCO40_RS00725;old_locus_tag=CCO40_00725 NZ_CP075116.1 Protein Homology CDS 148977 149996 . + 0 ID=cds-WP_001076596.1;Parent=gene-CCO40_RS00725;Dbxref=GenBank:WP_001076596.1;Name=WP_001076596.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462600.1;locus_tag=CCO40_RS00725;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076596.1;transl_table=11 NZ_CP075116.1 RefSeq gene 150074 150895 . + . ID=gene-CCO40_RS00730;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=CCO40_RS00730;old_locus_tag=CCO40_00730 NZ_CP075116.1 Protein Homology CDS 150074 150895 . + 0 ID=cds-WP_001112114.1;Parent=gene-CCO40_RS00730;Dbxref=GenBank:WP_001112114.1;Name=WP_001112114.1;Ontology_term=GO:0019344,GO:0009001;gbkey=CDS;gene=cysE;go_function=L-serine O-acetyltransferase activity|0009001||IEA;go_process=L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=CCO40_RS00730;product=serine O-acetyltransferase;protein_id=WP_001112114.1;transl_table=11 NZ_CP075116.1 RefSeq gene 150978 152288 . - . ID=gene-CCO40_RS00735;Name=CCO40_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00735;old_locus_tag=CCO40_00735 NZ_CP075116.1 Protein Homology CDS 150978 152288 . - 0 ID=cds-WP_001092104.1;Parent=gene-CCO40_RS00735;Dbxref=GenBank:WP_001092104.1;Name=WP_001092104.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462598.1;locus_tag=CCO40_RS00735;product=MFS transporter;protein_id=WP_001092104.1;transl_table=11 NZ_CP075116.1 RefSeq gene 152362 153558 . - . ID=gene-CCO40_RS00740;Name=CCO40_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00740;old_locus_tag=CCO40_00740 NZ_CP075116.1 Protein Homology CDS 152362 153558 . - 0 ID=cds-WP_001218249.1;Parent=gene-CCO40_RS00740;Dbxref=GenBank:WP_001218249.1;Name=WP_001218249.1;Ontology_term=GO:0046392,GO:1903663,GO:0008867,GO:1990594;gbkey=CDS;go_function=galactarate dehydratase activity|0008867||IEA,L-altrarate dehydratase activity|1990594||IEA;go_process=D-galactarate catabolic process|0046392||IEA,L-altrarate catabolic process|1903663||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462597.1;locus_tag=CCO40_RS00740;product=L-talarate/galactarate dehydratase;protein_id=WP_001218249.1;transl_table=11 NZ_CP075116.1 RefSeq gene 153877 154881 . + . ID=gene-CCO40_RS00745;Name=CCO40_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00745;old_locus_tag=CCO40_00745 NZ_CP075116.1 Protein Homology CDS 153877 154881 . + 0 ID=cds-WP_001537635.1;Parent=gene-CCO40_RS00745;Dbxref=GenBank:WP_001537635.1;Name=WP_001537635.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462596.1;locus_tag=CCO40_RS00745;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_001537635.1;transl_table=11 NZ_CP075116.1 RefSeq gene 154949 155422 . - . ID=gene-CCO40_RS00750;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=CCO40_RS00750;old_locus_tag=CCO40_00750 NZ_CP075116.1 Protein Homology CDS 154949 155422 . - 0 ID=cds-WP_000932336.1;Parent=gene-CCO40_RS00750;Dbxref=GenBank:WP_000932336.1;Name=WP_000932336.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=CCO40_RS00750;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932336.1;transl_table=11 NZ_CP075116.1 RefSeq gene 155487 156677 . - . ID=gene-CCO40_RS00755;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=CCO40_RS00755;old_locus_tag=CCO40_00755 NZ_CP075116.1 Protein Homology CDS 155487 156677 . - 0 ID=cds-WP_000586991.1;Parent=gene-CCO40_RS00755;Dbxref=GenBank:WP_000586991.1;Name=WP_000586991.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=CCO40_RS00755;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WP_000586991.1;transl_table=11 NZ_CP075116.1 RefSeq gene 156674 157450 . - . ID=gene-CCO40_RS00760;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=CCO40_RS00760;old_locus_tag=CCO40_00760 NZ_CP075116.1 Protein Homology CDS 156674 157450 . - 0 ID=cds-WP_000636696.1;Parent=gene-CCO40_RS00760;Dbxref=GenBank:WP_000636696.1;Name=WP_000636696.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462593.1;locus_tag=CCO40_RS00760;product=transcriptional regulator LldR;protein_id=WP_000636696.1;transl_table=11 NZ_CP075116.1 RefSeq gene 157447 159102 . - . ID=gene-CCO40_RS00765;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=CCO40_RS00765;old_locus_tag=CCO40_00765 NZ_CP075116.1 Protein Homology CDS 157447 159102 . - 0 ID=cds-WP_001055305.1;Parent=gene-CCO40_RS00765;Dbxref=GenBank:WP_001055305.1;Name=WP_001055305.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=CCO40_RS00765;product=L-lactate permease;protein_id=WP_001055305.1;transl_table=11 NZ_CP075116.1 RefSeq gene 159401 163786 . - . ID=gene-CCO40_RS00770;Name=sadA;gbkey=Gene;gene=sadA;gene_biotype=protein_coding;locus_tag=CCO40_RS00770;old_locus_tag=CCO40_00770 NZ_CP075116.1 Protein Homology CDS 159401 163786 . - 0 ID=cds-WP_080219211.1;Parent=gene-CCO40_RS00770;Dbxref=GenBank:WP_080219211.1;Name=WP_080219211.1;gbkey=CDS;gene=sadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462591.1;locus_tag=CCO40_RS00770;product=trimeric autotransporter adhesin SadA;protein_id=WP_080219211.1;transl_table=11 NZ_CP075116.1 RefSeq gene 163830 164513 . - . ID=gene-CCO40_RS00775;Name=CCO40_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00775;old_locus_tag=CCO40_00775 NZ_CP075116.1 Protein Homology CDS 163830 164513 . - 0 ID=cds-WP_000549457.1;Parent=gene-CCO40_RS00775;Dbxref=GenBank:WP_000549457.1;Name=WP_000549457.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462590.1;locus_tag=CCO40_RS00775;product=SadB/YajI family lipoprotein;protein_id=WP_000549457.1;transl_table=11 NZ_CP075116.1 RefSeq gene 165001 165363 . - . ID=gene-CCO40_RS00780;Name=CCO40_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00780;old_locus_tag=CCO40_00780 NZ_CP075116.1 Protein Homology CDS 165001 165363 . - 0 ID=cds-WP_000665687.1;Parent=gene-CCO40_RS00780;Dbxref=GenBank:WP_000665687.1;Name=WP_000665687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462589.1;locus_tag=CCO40_RS00780;product=YibL family ribosome-associated protein;protein_id=WP_000665687.1;transl_table=11 NZ_CP075116.1 RefSeq gene 165653 165862 . + . ID=gene-CCO40_RS00785;Name=CCO40_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00785;old_locus_tag=CCO40_00785 NZ_CP075116.1 Protein Homology CDS 165653 165862 . + 0 ID=cds-WP_001062558.1;Parent=gene-CCO40_RS00785;Dbxref=GenBank:WP_001062558.1;Name=WP_001062558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462588.1;locus_tag=CCO40_RS00785;product=hypothetical protein;protein_id=WP_001062558.1;transl_table=11 NZ_CP075116.1 RefSeq gene 165872 166462 . - . ID=gene-CCO40_RS00790;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=CCO40_RS00790;old_locus_tag=CCO40_00790 NZ_CP075116.1 Protein Homology CDS 165872 166462 . - 0 ID=cds-WP_000193201.1;Parent=gene-CCO40_RS00790;Dbxref=GenBank:WP_000193201.1;Name=WP_000193201.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462587.1;locus_tag=CCO40_RS00790;product=mannitol operon repressor MtlR;protein_id=WP_000193201.1;transl_table=11 NZ_CP075116.1 RefSeq gene 166459 167607 . - . ID=gene-CCO40_RS00795;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=CCO40_RS00795;old_locus_tag=CCO40_00795 NZ_CP075116.1 Protein Homology CDS 166459 167607 . - 0 ID=cds-WP_000645391.1;Parent=gene-CCO40_RS00795;Dbxref=GenBank:WP_000645391.1;Name=WP_000645391.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=CCO40_RS00795;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_000645391.1;transl_table=11 NZ_CP075116.1 RefSeq gene 167840 169756 . - . ID=gene-CCO40_RS00800;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=CCO40_RS00800;old_locus_tag=CCO40_00800 NZ_CP075116.1 Protein Homology CDS 167840 169756 . - 0 ID=cds-WP_094889135.1;Parent=gene-CCO40_RS00800;Dbxref=GenBank:WP_094889135.1;Name=WP_094889135.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462585.1;locus_tag=CCO40_RS00800;product=PTS mannitol transporter subunit IICBA;protein_id=WP_094889135.1;transl_table=11 NZ_CP075116.1 RefSeq gene 170290 170652 . + . ID=gene-CCO40_RS00805;Name=CCO40_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00805;old_locus_tag=CCO40_00805 NZ_CP075116.1 Protein Homology CDS 170290 170652 . + 0 ID=cds-WP_000479642.1;Parent=gene-CCO40_RS00805;Dbxref=GenBank:WP_000479642.1;Name=WP_000479642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418055.1;locus_tag=CCO40_RS00805;product=DUF3302 domain-containing protein;protein_id=WP_000479642.1;transl_table=11 NZ_CP075116.1 RefSeq gene 170655 171791 . + . ID=gene-CCO40_RS00810;Name=CCO40_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00810;old_locus_tag=CCO40_00810 NZ_CP075116.1 Protein Homology CDS 170655 171791 . + 0 ID=cds-WP_000364909.1;Parent=gene-CCO40_RS00810;Dbxref=GenBank:WP_000364909.1;Name=WP_000364909.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709371.1;locus_tag=CCO40_RS00810;product=HlyD family secretion protein;protein_id=WP_000364909.1;transl_table=11 NZ_CP075116.1 RefSeq gene 171889 172497 . + . ID=gene-CCO40_RS00815;Name=CCO40_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00815;old_locus_tag=CCO40_00815 NZ_CP075116.1 Protein Homology CDS 171889 172497 . + 0 ID=cds-WP_000766677.1;Parent=gene-CCO40_RS00815;Dbxref=GenBank:WP_000766677.1;Name=WP_000766677.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462584.1;locus_tag=CCO40_RS00815;product=glutathione S-transferase;protein_id=WP_000766677.1;transl_table=11 NZ_CP075116.1 RefSeq gene 172596 173987 . + . ID=gene-CCO40_RS00820;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=CCO40_RS00820;old_locus_tag=CCO40_00820 NZ_CP075116.1 Protein Homology CDS 172596 173987 . + 0 ID=cds-WP_000200188.1;Parent=gene-CCO40_RS00820;Dbxref=GenBank:WP_000200188.1;Name=WP_000200188.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462583.1;locus_tag=CCO40_RS00820;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_000200188.1;transl_table=11 NZ_CP075116.1 RefSeq gene 173984 175834 . + . ID=gene-CCO40_RS00825;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=CCO40_RS00825;old_locus_tag=CCO40_00825 NZ_CP075116.1 Protein Homology CDS 173984 175834 . + 0 ID=cds-WP_000582390.1;Parent=gene-CCO40_RS00825;Dbxref=GenBank:WP_000582390.1;Name=WP_000582390.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=CCO40_RS00825;product=selenocysteine-specific translation elongation factor;protein_id=WP_000582390.1;transl_table=11 NZ_CP075116.1 RefSeq gene 176082 176963 . - . ID=gene-CCO40_RS00830;Name=CCO40_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00830;old_locus_tag=CCO40_00830 NZ_CP075116.1 Protein Homology CDS 176082 176963 . - 0 ID=cds-WP_001188273.1;Parent=gene-CCO40_RS00830;Dbxref=GenBank:WP_001188273.1;Name=WP_001188273.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954677.1;locus_tag=CCO40_RS00830;product=ROK family protein;protein_id=WP_001188273.1;transl_table=11 NZ_CP075116.1 RefSeq gene 177132 178670 . + . ID=gene-CCO40_RS00835;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=CCO40_RS00835;old_locus_tag=CCO40_00835 NZ_CP075116.1 Protein Homology CDS 177132 178670 . + 0 ID=cds-WP_000183988.1;Parent=gene-CCO40_RS00835;Dbxref=GenBank:WP_000183988.1;Name=WP_000183988.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462580.1;locus_tag=CCO40_RS00835;product=aldehyde dehydrogenase AldB;protein_id=WP_000183988.1;transl_table=11 NZ_CP075116.1 RefSeq gene 179012 180967 . - . ID=gene-CCO40_RS00840;Name=CCO40_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00840;old_locus_tag=CCO40_00840 NZ_CP075116.1 Protein Homology CDS 179012 180967 . - 0 ID=cds-WP_094889136.1;Parent=gene-CCO40_RS00840;Dbxref=GenBank:WP_094889136.1;Name=WP_094889136.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=CCO40_RS00840;product=glycoside hydrolase family 127 protein;protein_id=WP_094889136.1;transl_table=11 NZ_CP075116.1 RefSeq gene 181231 182046 . + . ID=gene-CCO40_RS00845;Name=CCO40_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00845;old_locus_tag=CCO40_00845 NZ_CP075116.1 Protein Homology CDS 181231 182046 . + 0 ID=cds-WP_023204159.1;Parent=gene-CCO40_RS00845;Dbxref=GenBank:WP_023204159.1;Name=WP_023204159.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=CCO40_RS00845;product=AraC family transcriptional regulator;protein_id=WP_023204159.1;transl_table=11 NZ_CP075116.1 RefSeq gene 182207 182902 . - . ID=gene-CCO40_RS00850;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=CCO40_RS00850;old_locus_tag=CCO40_00850 NZ_CP075116.1 Protein Homology CDS 182207 182902 . - 0 ID=cds-WP_000893169.1;Parent=gene-CCO40_RS00850;Dbxref=GenBank:WP_000893169.1;Name=WP_000893169.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462577.1;locus_tag=CCO40_RS00850;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000893169.1;transl_table=11 NZ_CP075116.1 RefSeq gene 182896 183756 . - . ID=gene-CCO40_RS00855;Name=CCO40_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00855;old_locus_tag=CCO40_00855 NZ_CP075116.1 Protein Homology CDS 182896 183756 . - 0 ID=cds-WP_094889137.1;Parent=gene-CCO40_RS00855;Dbxref=GenBank:WP_094889137.1;Name=WP_094889137.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=CCO40_RS00855;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_094889137.1;transl_table=11 NZ_CP075116.1 RefSeq gene 183749 184411 . - . ID=gene-CCO40_RS00860;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=CCO40_RS00860;old_locus_tag=CCO40_00860 NZ_CP075116.1 Protein Homology CDS 183749 184411 . - 0 ID=cds-WP_000089535.1;Parent=gene-CCO40_RS00860;Dbxref=GenBank:WP_000089535.1;Name=WP_000089535.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462575.1;locus_tag=CCO40_RS00860;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000089535.1;transl_table=11 NZ_CP075116.1 RefSeq gene 184408 185904 . - . ID=gene-CCO40_RS00865;Name=CCO40_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00865;old_locus_tag=CCO40_00865 NZ_CP075116.1 Protein Homology CDS 184408 185904 . - 0 ID=cds-WP_000074079.1;Parent=gene-CCO40_RS00865;Dbxref=GenBank:WP_000074079.1;Name=WP_000074079.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462574.1;locus_tag=CCO40_RS00865;product=FGGY-family carbohydrate kinase;protein_id=WP_000074079.1;transl_table=11 NZ_CP075116.1 RefSeq gene 185908 186894 . - . ID=gene-CCO40_RS00870;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;locus_tag=CCO40_RS00870;old_locus_tag=CCO40_00870 NZ_CP075116.1 Protein Homology CDS 185908 186894 . - 0 ID=cds-WP_000766341.1;Parent=gene-CCO40_RS00870;Dbxref=GenBank:WP_000766341.1;Name=WP_000766341.1;gbkey=CDS;gene=yiaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=CCO40_RS00870;product=2%2C3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO;protein_id=WP_000766341.1;transl_table=11 NZ_CP075116.1 RefSeq gene 186906 188183 . - . ID=gene-CCO40_RS00875;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=CCO40_RS00875;old_locus_tag=CCO40_00875 NZ_CP075116.1 Protein Homology CDS 186906 188183 . - 0 ID=cds-WP_000301822.1;Parent=gene-CCO40_RS00875;Dbxref=GenBank:WP_000301822.1;Name=WP_000301822.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaN;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462572.1;locus_tag=CCO40_RS00875;product=2%2C3-diketo-L-gulonate TRAP transporter large permease YiaN;protein_id=WP_000301822.1;transl_table=11 NZ_CP075116.1 RefSeq gene 188186 188659 . - . ID=gene-CCO40_RS00880;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=CCO40_RS00880;old_locus_tag=CCO40_00880 NZ_CP075116.1 Protein Homology CDS 188186 188659 . - 0 ID=cds-WP_000832316.1;Parent=gene-CCO40_RS00880;Dbxref=GenBank:WP_000832316.1;Name=WP_000832316.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaM;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462571.1;locus_tag=CCO40_RS00880;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WP_000832316.1;transl_table=11 NZ_CP075116.1 RefSeq gene 188798 189730 . - . ID=gene-CCO40_RS00885;Name=CCO40_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00885;old_locus_tag=CCO40_00885 NZ_CP075116.1 Protein Homology CDS 188798 189730 . - 0 ID=cds-WP_000794968.1;Parent=gene-CCO40_RS00885;Dbxref=GenBank:WP_000794968.1;Name=WP_000794968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462570.1;locus_tag=CCO40_RS00885;product=DUF4862 family protein;protein_id=WP_000794968.1;transl_table=11 NZ_CP075116.1 RefSeq gene 189754 190218 . - . ID=gene-CCO40_RS00890;Name=CCO40_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00890;old_locus_tag=CCO40_00890 NZ_CP075116.1 Protein Homology CDS 189754 190218 . - 0 ID=cds-WP_000576102.1;Parent=gene-CCO40_RS00890;Dbxref=GenBank:WP_000576102.1;Name=WP_000576102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=CCO40_RS00890;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000576102.1;transl_table=11 NZ_CP075116.1 RefSeq gene 190230 191228 . - . ID=gene-CCO40_RS00895;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=CCO40_RS00895;old_locus_tag=CCO40_00895 NZ_CP075116.1 Protein Homology CDS 190230 191228 . - 0 ID=cds-WP_000869010.1;Parent=gene-CCO40_RS00895;Dbxref=GenBank:WP_000869010.1;Name=WP_000869010.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=CCO40_RS00895;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_000869010.1;transl_table=11 NZ_CP075116.1 RefSeq gene 191458 192258 . + . ID=gene-CCO40_RS00900;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=CCO40_RS00900;old_locus_tag=CCO40_00900 NZ_CP075116.1 Protein Homology CDS 191458 192258 . + 0 ID=cds-WP_000081338.1;Parent=gene-CCO40_RS00900;Dbxref=GenBank:WP_000081338.1;Name=WP_000081338.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462567.1;locus_tag=CCO40_RS00900;product=IclR family transcriptional regulator YiaJ;protein_id=WP_000081338.1;transl_table=11 NZ_CP075116.1 RefSeq gene 192375 192848 . + . ID=gene-CCO40_RS00905;Name=CCO40_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00905;old_locus_tag=CCO40_00905 NZ_CP075116.1 Protein Homology CDS 192375 192848 . + 0 ID=cds-WP_001078822.1;Parent=gene-CCO40_RS00905;Dbxref=GenBank:WP_001078822.1;Name=WP_001078822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462566.1;locus_tag=CCO40_RS00905;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001078822.1;transl_table=11 NZ_CP075116.1 RefSeq gene 192885 194135 . - . ID=gene-CCO40_RS00910;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=CCO40_RS00910;old_locus_tag=CCO40_00910 NZ_CP075116.1 Protein Homology CDS 192885 194135 . - 0 ID=cds-WP_000144383.1;Parent=gene-CCO40_RS00910;Dbxref=GenBank:WP_000144383.1;Name=WP_000144383.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462565.1;locus_tag=CCO40_RS00910;product=valine--pyruvate transaminase;protein_id=WP_000144383.1;transl_table=11 NZ_CP075116.1 RefSeq gene 194309 196336 . - . ID=gene-CCO40_RS00915;Name=CCO40_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00915;old_locus_tag=CCO40_00915 NZ_CP075116.1 Protein Homology CDS 194309 196336 . - 0 ID=cds-WP_000761323.1;Parent=gene-CCO40_RS00915;Dbxref=GenBank:WP_000761323.1;Name=WP_000761323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=CCO40_RS00915;product=alpha-amylase;protein_id=WP_000761323.1;transl_table=11 NZ_CP075116.1 RefSeq gene 196652 197476 . + . ID=gene-CCO40_RS00920;Name=CCO40_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00920;old_locus_tag=CCO40_00920 NZ_CP075116.1 Protein Homology CDS 196652 197476 . + 0 ID=cds-WP_001575119.1;Parent=gene-CCO40_RS00920;Dbxref=GenBank:WP_001575119.1;Name=WP_001575119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=CCO40_RS00920;product=protein bax;protein_id=WP_001575119.1;transl_table=11 NZ_CP075116.1 RefSeq gene 197537 198715 . - . ID=gene-CCO40_RS00925;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=CCO40_RS00925;old_locus_tag=CCO40_00925 NZ_CP075116.1 Protein Homology CDS 197537 198715 . - 0 ID=cds-WP_000459824.1;Parent=gene-CCO40_RS00925;Dbxref=GenBank:WP_000459824.1;Name=WP_000459824.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462562.1;locus_tag=CCO40_RS00925;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_000459824.1;transl_table=11 NZ_CP075116.1 RefSeq gene 199078 200400 . + . ID=gene-CCO40_RS00930;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=CCO40_RS00930;old_locus_tag=CCO40_00930 NZ_CP075116.1 Protein Homology CDS 199078 200400 . + 0 ID=cds-WP_001149561.1;Parent=gene-CCO40_RS00930;Dbxref=GenBank:WP_001149561.1;Name=WP_001149561.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=CCO40_RS00930;product=xylose isomerase;protein_id=WP_001149561.1;transl_table=11 NZ_CP075116.1 RefSeq gene 200500 201954 . + . ID=gene-CCO40_RS00935;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=CCO40_RS00935;old_locus_tag=CCO40_00935 NZ_CP075116.1 Protein Homology CDS 200500 201954 . + 0 ID=cds-WP_000275326.1;Parent=gene-CCO40_RS00935;Dbxref=GenBank:WP_000275326.1;Name=WP_000275326.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=CCO40_RS00935;product=xylulokinase;protein_id=WP_000275326.1;transl_table=11 NZ_CP075116.1 RefSeq gene 202129 202482 . + . ID=gene-CCO40_RS00940;Name=CCO40_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00940;old_locus_tag=CCO40_00940 NZ_CP075116.1 Protein Homology CDS 202129 202482 . + 0 ID=cds-WP_000340935.1;Parent=gene-CCO40_RS00940;Dbxref=GenBank:WP_000340935.1;Name=WP_000340935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462559.1;locus_tag=CCO40_RS00940;product=YiaA/YiaB family protein;protein_id=WP_000340935.1;transl_table=11 NZ_CP075116.1 RefSeq gene 202505 203500 . - . ID=gene-CCO40_RS00945;Name=CCO40_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00945;old_locus_tag=CCO40_00945 NZ_CP075116.1 Protein Homology CDS 202505 203500 . - 0 ID=cds-WP_001182588.1;Parent=gene-CCO40_RS00945;Dbxref=GenBank:WP_001182588.1;Name=WP_001182588.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=CCO40_RS00945;product=acyltransferase;protein_id=WP_001182588.1;transl_table=11 NZ_CP075116.1 RefSeq gene 203666 203968 . + . ID=gene-CCO40_RS00950;Name=CCO40_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00950;old_locus_tag=CCO40_00950 NZ_CP075116.1 Protein Homology CDS 203666 203968 . + 0 ID=cds-WP_000605590.1;Parent=gene-CCO40_RS00950;Dbxref=GenBank:WP_000605590.1;Name=WP_000605590.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462557.1;locus_tag=CCO40_RS00950;product=YsaB family lipoprotein;protein_id=WP_000605590.1;transl_table=11 NZ_CP075116.1 RefSeq gene 204107 205018 . + . ID=gene-CCO40_RS00955;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=CCO40_RS00955;old_locus_tag=CCO40_00955 NZ_CP075116.1 Protein Homology CDS 204107 205018 . + 0 ID=cds-WP_001168551.1;Parent=gene-CCO40_RS00955;Dbxref=GenBank:WP_001168551.1;Name=WP_001168551.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462556.1;locus_tag=CCO40_RS00955;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168551.1;transl_table=11 NZ_CP075116.1 RefSeq gene 205028 207097 . + . ID=gene-CCO40_RS00960;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=CCO40_RS00960;old_locus_tag=CCO40_00960 NZ_CP075116.1 Protein Homology CDS 205028 207097 . + 0 ID=cds-WP_001291736.1;Parent=gene-CCO40_RS00960;Dbxref=GenBank:WP_001291736.1;Name=WP_001291736.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=CCO40_RS00960;product=glycine--tRNA ligase subunit beta;protein_id=WP_001291736.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 207279 207554 . + . ID=gene-CCO40_RS00965;Name=CCO40_RS00965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS00965;old_locus_tag=CCO40_00965;partial=true;pseudo=true;start_range=.,207279 NZ_CP075116.1 Protein Homology CDS 207279 207554 . + 0 ID=cds-CCO40_RS00965;Parent=gene-CCO40_RS00965;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=CCO40_RS00965;partial=true;product=transposase;pseudo=true;start_range=.,207279;transl_table=11 NZ_CP075116.1 RefSeq gene 207726 208193 . + . ID=gene-CCO40_RS00970;Name=CCO40_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00970;old_locus_tag=CCO40_00970 NZ_CP075116.1 Protein Homology CDS 207726 208193 . + 0 ID=cds-WP_000702452.1;Parent=gene-CCO40_RS00970;Dbxref=GenBank:WP_000702452.1;Name=WP_000702452.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462554.1;locus_tag=CCO40_RS00970;product=GNAT family N-acetyltransferase;protein_id=WP_000702452.1;transl_table=11 NZ_CP075116.1 RefSeq gene 208371 208658 . + . ID=gene-CCO40_RS00975;Name=CCO40_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00975;old_locus_tag=CCO40_00975 NZ_CP075116.1 Protein Homology CDS 208371 208658 . + 0 ID=cds-WP_000965886.1;Parent=gene-CCO40_RS00975;Dbxref=GenBank:WP_000965886.1;Name=WP_000965886.1;Ontology_term=GO:0006355,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462553.1;locus_tag=CCO40_RS00975;product=type II toxin-antitoxin system TacA family antitoxin;protein_id=WP_000965886.1;transl_table=11 NZ_CP075116.1 RefSeq gene 208646 209131 . + . ID=gene-CCO40_RS00980;Name=CCO40_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00980;old_locus_tag=CCO40_00980 NZ_CP075116.1 Protein Homology CDS 208646 209131 . + 0 ID=cds-WP_000533909.1;Parent=gene-CCO40_RS00980;Dbxref=GenBank:WP_000533909.1;Name=WP_000533909.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462552.1;locus_tag=CCO40_RS00980;product=GNAT family N-acetyltransferase;protein_id=WP_000533909.1;transl_table=11 NZ_CP075116.1 RefSeq gene 209503 210042 . - . ID=gene-CCO40_RS00985;Name=cueP;gbkey=Gene;gene=cueP;gene_biotype=protein_coding;locus_tag=CCO40_RS00985;old_locus_tag=CCO40_00985 NZ_CP075116.1 Protein Homology CDS 209503 210042 . - 0 ID=cds-WP_000047149.1;Parent=gene-CCO40_RS00985;Dbxref=GenBank:WP_000047149.1;Name=WP_000047149.1;gbkey=CDS;gene=cueP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462551.1;locus_tag=CCO40_RS00985;product=copper-binding periplasmic metallochaperone CueP;protein_id=WP_000047149.1;transl_table=11 NZ_CP075116.1 RefSeq gene 210216 210428 . - . ID=gene-CCO40_RS00990;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO40_RS00990;old_locus_tag=CCO40_00990 NZ_CP075116.1 Protein Homology CDS 210216 210428 . - 0 ID=cds-WP_000014594.1;Parent=gene-CCO40_RS00990;Dbxref=GenBank:WP_000014594.1;Name=WP_000014594.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=CCO40_RS00990;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000014594.1;transl_table=11 NZ_CP075116.1 RefSeq gene 210717 211007 . - . ID=gene-CCO40_RS00995;Name=CCO40_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS00995;old_locus_tag=CCO40_00995 NZ_CP075116.1 Protein Homology CDS 210717 211007 . - 0 ID=cds-WP_000455790.1;Parent=gene-CCO40_RS00995;Dbxref=GenBank:WP_000455790.1;Name=WP_000455790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462549.1;locus_tag=CCO40_RS00995;product=HTH-type transcriptional regulator;protein_id=WP_000455790.1;transl_table=11 NZ_CP075116.1 RefSeq gene 211445 212155 . + . ID=gene-CCO40_RS01000;Name=CCO40_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01000;old_locus_tag=CCO40_01000 NZ_CP075116.1 Protein Homology CDS 211445 212155 . + 0 ID=cds-WP_000190524.1;Parent=gene-CCO40_RS01000;Dbxref=GenBank:WP_000190524.1;Name=WP_000190524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462548.1;locus_tag=CCO40_RS01000;product=DUF3053 domain-containing protein;protein_id=WP_000190524.1;transl_table=11 NZ_CP075116.1 RefSeq gene 212205 213179 . - . ID=gene-CCO40_RS01005;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=CCO40_RS01005;old_locus_tag=CCO40_01005 NZ_CP075116.1 Protein Homology CDS 212205 213179 . - 0 ID=cds-WP_000804674.1;Parent=gene-CCO40_RS01005;Dbxref=GenBank:WP_000804674.1;Name=WP_000804674.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462547.1;locus_tag=CCO40_RS01005;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_000804674.1;transl_table=11 NZ_CP075116.1 RefSeq gene 213398 214060 . - . ID=gene-CCO40_RS01010;Name=CCO40_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01010;old_locus_tag=CCO40_01010 NZ_CP075116.1 Protein Homology CDS 213398 214060 . - 0 ID=cds-WP_000747548.1;Parent=gene-CCO40_RS01010;Dbxref=GenBank:WP_000747548.1;Name=WP_000747548.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462546.1;locus_tag=CCO40_RS01010;product=OmpA family lipoprotein;protein_id=WP_000747548.1;transl_table=11 NZ_CP075116.1 RefSeq gene 214213 216546 . + . ID=gene-CCO40_RS01015;Name=CCO40_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01015;old_locus_tag=CCO40_01015 NZ_CP075116.1 Protein Homology CDS 214213 216546 . + 0 ID=cds-WP_094889138.1;Parent=gene-CCO40_RS01015;Dbxref=GenBank:WP_094889138.1;Name=WP_094889138.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=CCO40_RS01015;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_094889138.1;transl_table=11 NZ_CP075116.1 RefSeq gene 216515 216955 . - . ID=gene-CCO40_RS01020;Name=CCO40_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01020;old_locus_tag=CCO40_01020 NZ_CP075116.1 Protein Homology CDS 216515 216955 . - 0 ID=cds-WP_094889139.1;Parent=gene-CCO40_RS01020;Dbxref=GenBank:WP_094889139.1;Name=WP_094889139.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462544.1;locus_tag=CCO40_RS01020;product=N-acetyltransferase;protein_id=WP_094889139.1;transl_table=11 NZ_CP075116.1 RefSeq gene 216933 217514 . - . ID=gene-CCO40_RS01025;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=CCO40_RS01025;old_locus_tag=CCO40_01025 NZ_CP075116.1 Protein Homology CDS 216933 217514 . - 0 ID=cds-WP_024798354.1;Parent=gene-CCO40_RS01025;Dbxref=GenBank:WP_024798354.1;Name=WP_024798354.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462543.1;locus_tag=CCO40_RS01025;product=DNA-3-methyladenine glycosylase I;protein_id=WP_024798354.1;transl_table=11 NZ_CP075116.1 RefSeq gene 217670 218374 . + . ID=gene-CCO40_RS01030;Name=CCO40_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01030;old_locus_tag=CCO40_01030 NZ_CP075116.1 Protein Homology CDS 217670 218374 . + 0 ID=cds-WP_000637072.1;Parent=gene-CCO40_RS01030;Dbxref=GenBank:WP_000637072.1;Name=WP_000637072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462542.1;locus_tag=CCO40_RS01030;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000637072.1;transl_table=11 NZ_CP075116.1 RefSeq gene 218892 219416 . + . ID=gene-CCO40_RS01035;Name=lpfA;gbkey=Gene;gene=lpfA;gene_biotype=protein_coding;locus_tag=CCO40_RS01035;old_locus_tag=CCO40_01035 NZ_CP075116.1 Protein Homology CDS 218892 219416 . + 0 ID=cds-WP_001519917.1;Parent=gene-CCO40_RS01035;Dbxref=GenBank:WP_001519917.1;Name=WP_001519917.1;gbkey=CDS;gene=lpfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519917.1;locus_tag=CCO40_RS01035;product=long polar fimbria major subunit LpfA;protein_id=WP_001519917.1;transl_table=11 NZ_CP075116.1 RefSeq gene 219501 220199 . + . ID=gene-CCO40_RS01040;Name=lpfB;gbkey=Gene;gene=lpfB;gene_biotype=protein_coding;locus_tag=CCO40_RS01040;old_locus_tag=CCO40_01040 NZ_CP075116.1 Protein Homology CDS 219501 220199 . + 0 ID=cds-WP_001082123.1;Parent=gene-CCO40_RS01040;Dbxref=GenBank:WP_001082123.1;Name=WP_001082123.1;gbkey=CDS;gene=lpfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462540.1;locus_tag=CCO40_RS01040;product=long polar fimbrial chaperone LpfB;protein_id=WP_001082123.1;transl_table=11 NZ_CP075116.1 RefSeq gene 220222 222750 . + . ID=gene-CCO40_RS01045;Name=lpfC;gbkey=Gene;gene=lpfC;gene_biotype=protein_coding;locus_tag=CCO40_RS01045;old_locus_tag=CCO40_01045 NZ_CP075116.1 Protein Homology CDS 220222 222750 . + 0 ID=cds-WP_021000884.1;Parent=gene-CCO40_RS01045;Dbxref=GenBank:WP_021000884.1;Name=WP_021000884.1;gbkey=CDS;gene=lpfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462539.1;locus_tag=CCO40_RS01045;product=outer membrane usher protein LpfC;protein_id=WP_021000884.1;transl_table=11 NZ_CP075116.1 RefSeq gene 222768 223847 . + . ID=gene-CCO40_RS01050;Name=lpfD;gbkey=Gene;gene=lpfD;gene_biotype=protein_coding;locus_tag=CCO40_RS01050;old_locus_tag=CCO40_01050 NZ_CP075116.1 Protein Homology CDS 222768 223847 . + 0 ID=cds-WP_023210225.1;Parent=gene-CCO40_RS01050;Dbxref=GenBank:WP_023210225.1;Name=WP_023210225.1;gbkey=CDS;gene=lpfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462538.1;locus_tag=CCO40_RS01050;product=long polar fimbrial protein LpfD;protein_id=WP_023210225.1;transl_table=11 NZ_CP075116.1 RefSeq gene 223853 224380 . + . ID=gene-CCO40_RS01055;Name=lpfE;gbkey=Gene;gene=lpfE;gene_biotype=protein_coding;locus_tag=CCO40_RS01055;old_locus_tag=CCO40_01055 NZ_CP075116.1 Protein Homology CDS 223853 224380 . + 0 ID=cds-WP_094889140.1;Parent=gene-CCO40_RS01055;Dbxref=GenBank:WP_094889140.1;Name=WP_094889140.1;gbkey=CDS;gene=lpfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462537.1;locus_tag=CCO40_RS01055;product=long polar fimbrial protein LpfE;protein_id=WP_094889140.1;transl_table=11 NZ_CP075116.1 RefSeq gene 224598 226289 . + . ID=gene-CCO40_RS01060;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=CCO40_RS01060;old_locus_tag=CCO40_01060 NZ_CP075116.1 Protein Homology CDS 224598 226289 . + 0 ID=cds-WP_001269258.1;Parent=gene-CCO40_RS01060;Dbxref=GenBank:WP_001269258.1;Name=WP_001269258.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=CCO40_RS01060;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_001269258.1;transl_table=11 NZ_CP075116.1 RefSeq gene 226380 226456 . + . ID=gene-CCO40_RS01065;Name=CCO40_RS01065;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS01065;old_locus_tag=CCO40_01065 NZ_CP075116.1 tRNAscan-SE tRNA 226380 226456 . + . ID=rna-CCO40_RS01065;Parent=gene-CCO40_RS01065;anticodon=(pos:226414..226416);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS01065;product=tRNA-Pro NZ_CP075116.1 tRNAscan-SE exon 226380 226456 . + . ID=exon-CCO40_RS01065-1;Parent=rna-CCO40_RS01065;anticodon=(pos:226414..226416);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS01065;product=tRNA-Pro NZ_CP075116.1 RefSeq gene 226491 226624 . + . ID=gene-CCO40_RS01070;Name=CCO40_RS01070;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO40_RS01070;old_locus_tag=CCO40_01070 NZ_CP075116.1 cmsearch ncRNA 226491 226624 . + . ID=rna-CCO40_RS01070;Parent=gene-CCO40_RS01070;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00391,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS01070;product=RtT sRNA NZ_CP075116.1 cmsearch exon 226491 226624 . + . ID=exon-CCO40_RS01070-1;Parent=rna-CCO40_RS01070;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00391,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS01070;product=RtT sRNA NZ_CP075116.1 RefSeq gene 226660 226778 . + . ID=gene-CCO40_RS01075;Name=CCO40_RS01075;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO40_RS01075;old_locus_tag=CCO40_01075 NZ_CP075116.1 cmsearch ncRNA 226660 226778 . + . ID=rna-CCO40_RS01075;Parent=gene-CCO40_RS01075;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00391,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS01075;product=RtT sRNA NZ_CP075116.1 cmsearch exon 226660 226778 . + . ID=exon-CCO40_RS01075-1;Parent=rna-CCO40_RS01075;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00391,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS01075;product=RtT sRNA NZ_CP075116.1 RefSeq gene 226769 227776 . - . ID=gene-CCO40_RS01080;Name=CCO40_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01080;old_locus_tag=CCO40_01080 NZ_CP075116.1 Protein Homology CDS 226769 227776 . - 0 ID=cds-WP_023254688.1;Parent=gene-CCO40_RS01080;Dbxref=GenBank:WP_023254688.1;Name=WP_023254688.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462535.1;locus_tag=CCO40_RS01080;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_023254688.1;transl_table=11 NZ_CP075116.1 RefSeq gene 227926 229050 . + . ID=gene-CCO40_RS01085;Name=CCO40_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01085;old_locus_tag=CCO40_01085 NZ_CP075116.1 Protein Homology CDS 227926 229050 . + 0 ID=cds-WP_079944129.1;Parent=gene-CCO40_RS01085;Dbxref=GenBank:WP_079944129.1;Name=WP_079944129.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462534.1;locus_tag=CCO40_RS01085;product=aryl-sulfate sulfotransferase;protein_id=WP_079944129.1;transl_table=11 NZ_CP075116.1 RefSeq gene 229108 230433 . + . ID=gene-CCO40_RS01090;Name=CCO40_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01090;old_locus_tag=CCO40_01090 NZ_CP075116.1 Protein Homology CDS 229108 230433 . + 0 ID=cds-WP_001136079.1;Parent=gene-CCO40_RS01090;Dbxref=GenBank:WP_001136079.1;Name=WP_001136079.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=CCO40_RS01090;product=uracil-xanthine permease family protein;protein_id=WP_001136079.1;transl_table=11 NZ_CP075116.1 RefSeq gene 230989 232596 . + . ID=gene-CCO40_RS01095;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=CCO40_RS01095;old_locus_tag=CCO40_01095 NZ_CP075116.1 Protein Homology CDS 230989 232596 . + 0 ID=cds-WP_000028047.1;Parent=gene-CCO40_RS01095;Dbxref=GenBank:WP_000028047.1;Name=WP_000028047.1;Ontology_term=GO:0042938,GO:0071916,GO:0030288;gbkey=CDS;gene=dppA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=CCO40_RS01095;product=dipeptide ABC transporter periplasmic-binding protein DppA;protein_id=WP_000028047.1;transl_table=11 NZ_CP075116.1 RefSeq gene 232753 233772 . + . ID=gene-CCO40_RS01100;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=CCO40_RS01100;old_locus_tag=CCO40_01100 NZ_CP075116.1 Protein Homology CDS 232753 233772 . + 0 ID=cds-WP_000938843.1;Parent=gene-CCO40_RS01100;Dbxref=GenBank:WP_000938843.1;Name=WP_000938843.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=CCO40_RS01100;product=dipeptide ABC transporter permease DppB;protein_id=WP_000938843.1;transl_table=11 NZ_CP075116.1 RefSeq gene 233782 234684 . + . ID=gene-CCO40_RS01105;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=CCO40_RS01105;old_locus_tag=CCO40_01105 NZ_CP075116.1 Protein Homology CDS 233782 234684 . + 0 ID=cds-WP_000084690.1;Parent=gene-CCO40_RS01105;Dbxref=GenBank:WP_000084690.1;Name=WP_000084690.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=CCO40_RS01105;product=dipeptide ABC transporter permease DppC;protein_id=WP_000084690.1;transl_table=11 NZ_CP075116.1 RefSeq gene 234695 235678 . + . ID=gene-CCO40_RS01110;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=CCO40_RS01110;old_locus_tag=CCO40_01110 NZ_CP075116.1 Protein Homology CDS 234695 235678 . + 0 ID=cds-WP_001196509.1;Parent=gene-CCO40_RS01110;Dbxref=GenBank:WP_001196509.1;Name=WP_001196509.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462529.1;locus_tag=CCO40_RS01110;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001196509.1;transl_table=11 NZ_CP075116.1 RefSeq gene 235675 236688 . + . ID=gene-CCO40_RS01115;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=CCO40_RS01115;old_locus_tag=CCO40_01115 NZ_CP075116.1 Protein Homology CDS 235675 236688 . + 0 ID=cds-WP_094889141.1;Parent=gene-CCO40_RS01115;Dbxref=GenBank:WP_094889141.1;Name=WP_094889141.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462528.1;locus_tag=CCO40_RS01115;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_094889141.1;transl_table=11 NZ_CP075116.1 RefSeq gene 236789 238087 . - . ID=gene-CCO40_RS01120;Name=CCO40_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01120;old_locus_tag=CCO40_01120 NZ_CP075116.1 Protein Homology CDS 236789 238087 . - 0 ID=cds-WP_094889142.1;Parent=gene-CCO40_RS01120;Dbxref=GenBank:WP_094889142.1;Name=WP_094889142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462527.1;locus_tag=CCO40_RS01120;product=SLC5/6 family protein;protein_id=WP_094889142.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 238205 238357 . - . ID=gene-CCO40_RS22410;Name=CCO40_RS22410;end_range=238357,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22410;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 238205 238357 . - 0 ID=cds-CCO40_RS22410;Parent=gene-CCO40_RS22410;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019346,GO:0030170;end_range=238357,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: protein motif:HMM:NF013237.7;locus_tag=CCO40_RS22410;partial=true;product=PLP-dependent transferase;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 238730 238837 . + . ID=gene-CCO40_RS01130;Name=CCO40_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01130;old_locus_tag=CCO40_01130 NZ_CP075116.1 Protein Homology CDS 238730 238837 . + 0 ID=cds-WP_001537650.1;Parent=gene-CCO40_RS01130;Dbxref=GenBank:WP_001537650.1;Name=WP_001537650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=CCO40_RS01130;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001537650.1;transl_table=11 NZ_CP075116.1 RefSeq gene 238919 240598 . - . ID=gene-CCO40_RS01135;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=CCO40_RS01135;old_locus_tag=CCO40_01135 NZ_CP075116.1 Protein Homology CDS 238919 240598 . - 0 ID=cds-WP_000192022.1;Parent=gene-CCO40_RS01135;Dbxref=GenBank:WP_000192022.1;Name=WP_000192022.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462525.1;locus_tag=CCO40_RS01135;product=cellulose biosynthesis protein BcsG;protein_id=WP_000192022.1;transl_table=11 NZ_CP075116.1 RefSeq gene 240595 240786 . - . ID=gene-CCO40_RS01140;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=CCO40_RS01140;old_locus_tag=CCO40_01140 NZ_CP075116.1 Protein Homology CDS 240595 240786 . - 0 ID=cds-WP_000988321.1;Parent=gene-CCO40_RS01140;Dbxref=GenBank:WP_000988321.1;Name=WP_000988321.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462524.1;locus_tag=CCO40_RS01140;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988321.1;transl_table=11 NZ_CP075116.1 RefSeq gene 240783 242354 . - . ID=gene-CCO40_RS01145;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=CCO40_RS01145;old_locus_tag=CCO40_01145 NZ_CP075116.1 Protein Homology CDS 240783 242354 . - 0 ID=cds-WP_001205771.1;Parent=gene-CCO40_RS01145;Dbxref=GenBank:WP_001205771.1;Name=WP_001205771.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462523.1;locus_tag=CCO40_RS01145;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WP_001205771.1;transl_table=11 NZ_CP075116.1 RefSeq gene 242599 242802 . + . ID=gene-CCO40_RS01150;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=CCO40_RS01150;old_locus_tag=CCO40_01150 NZ_CP075116.1 Protein Homology CDS 242599 242802 . + 0 ID=cds-WP_000282616.1;Parent=gene-CCO40_RS01150;Dbxref=GenBank:WP_000282616.1;Name=WP_000282616.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462522.1;locus_tag=CCO40_RS01150;product=cellulose biosynthesis protein BcsR;protein_id=WP_000282616.1;transl_table=11 NZ_CP075116.1 RefSeq gene 242803 243555 . + . ID=gene-CCO40_RS01155;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=CCO40_RS01155;old_locus_tag=CCO40_01155 NZ_CP075116.1 Protein Homology CDS 242803 243555 . + 0 ID=cds-WP_000996115.1;Parent=gene-CCO40_RS01155;Dbxref=GenBank:WP_000996115.1;Name=WP_000996115.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462521.1;locus_tag=CCO40_RS01155;product=cellulose biosynthesis protein BcsQ;protein_id=WP_000996115.1;transl_table=11 NZ_CP075116.1 RefSeq gene 243552 246176 . + . ID=gene-CCO40_RS01160;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=CCO40_RS01160;old_locus_tag=CCO40_01160 NZ_CP075116.1 Protein Homology CDS 243552 246176 . + 0 ID=cds-WP_001275342.1;Parent=gene-CCO40_RS01160;Dbxref=GenBank:WP_001275342.1;Name=WP_001275342.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=CCO40_RS01160;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_001275342.1;transl_table=11 NZ_CP075116.1 RefSeq gene 246187 248487 . + . ID=gene-CCO40_RS01165;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=CCO40_RS01165;old_locus_tag=CCO40_01165 NZ_CP075116.1 Protein Homology CDS 246187 248487 . + 0 ID=cds-WP_000823812.1;Parent=gene-CCO40_RS01165;Dbxref=GenBank:WP_000823812.1;Name=WP_000823812.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462519.1;locus_tag=CCO40_RS01165;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_000823812.1;transl_table=11 NZ_CP075116.1 RefSeq gene 248491 249600 . + . ID=gene-CCO40_RS01170;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=CCO40_RS01170;old_locus_tag=CCO40_01170 NZ_CP075116.1 Protein Homology CDS 248491 249600 . + 0 ID=cds-WP_000988801.1;Parent=gene-CCO40_RS01170;Dbxref=GenBank:WP_000988801.1;Name=WP_000988801.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462518.1;locus_tag=CCO40_RS01170;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_000988801.1;transl_table=11 NZ_CP075116.1 RefSeq gene 249582 253124 . + . ID=gene-CCO40_RS01175;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=CCO40_RS01175;old_locus_tag=CCO40_01175 NZ_CP075116.1 Protein Homology CDS 249582 253124 . + 0 ID=cds-WP_094889143.1;Parent=gene-CCO40_RS01175;Dbxref=GenBank:WP_094889143.1;Name=WP_094889143.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=CCO40_RS01175;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_094889143.1;transl_table=11 NZ_CP075116.1 RefSeq gene 253298 255304 . + . ID=gene-CCO40_RS01180;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=CCO40_RS01180;old_locus_tag=CCO40_01180 NZ_CP075116.1 Protein Homology CDS 253298 255304 . + 0 ID=cds-WP_094889144.1;Parent=gene-CCO40_RS01180;Dbxref=GenBank:WP_094889144.1;Name=WP_094889144.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=CCO40_RS01180;product=biofilm formation regulator HmsP;protein_id=WP_094889144.1;transl_table=11 NZ_CP075116.1 RefSeq gene 255462 256748 . + . ID=gene-CCO40_RS01185;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=CCO40_RS01185;old_locus_tag=CCO40_01185 NZ_CP075116.1 Protein Homology CDS 255462 256748 . + 0 ID=cds-WP_000858228.1;Parent=gene-CCO40_RS01185;Dbxref=GenBank:WP_000858228.1;Name=WP_000858228.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462515.1;locus_tag=CCO40_RS01185;product=C4-dicarboxylate transporter DctC;protein_id=WP_000858228.1;transl_table=11 NZ_CP075116.1 RefSeq gene 256968 258455 . + . ID=gene-CCO40_RS01190;Name=CCO40_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01190;old_locus_tag=CCO40_01190 NZ_CP075116.1 Protein Homology CDS 256968 258455 . + 0 ID=cds-WP_001163182.1;Parent=gene-CCO40_RS01190;Dbxref=GenBank:WP_001163182.1;Name=WP_001163182.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=CCO40_RS01190;product=M16 family metallopeptidase;protein_id=WP_001163182.1;transl_table=11 NZ_CP075116.1 RefSeq gene 258509 259438 . - . ID=gene-CCO40_RS01195;Name=kdgK;gbkey=Gene;gene=kdgK;gene_biotype=protein_coding;locus_tag=CCO40_RS01195;old_locus_tag=CCO40_01195 NZ_CP075116.1 Protein Homology CDS 258509 259438 . - 0 ID=cds-WP_000037575.1;Parent=gene-CCO40_RS01195;Dbxref=GenBank:WP_000037575.1;Name=WP_000037575.1;Ontology_term=GO:0000166,GO:0005524,GO:0008673;gbkey=CDS;gene=kdgK;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,2-dehydro-3-deoxygluconokinase activity|0008673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462513.1;locus_tag=CCO40_RS01195;product=2-dehydro-3-deoxygluconokinase;protein_id=WP_000037575.1;transl_table=11 NZ_CP075116.1 RefSeq gene 259667 260434 . + . ID=gene-CCO40_RS01200;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=CCO40_RS01200;old_locus_tag=CCO40_01200 NZ_CP075116.1 Protein Homology CDS 259667 260434 . + 0 ID=cds-WP_000595626.1;Parent=gene-CCO40_RS01200;Dbxref=GenBank:WP_000595626.1;Name=WP_000595626.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=CCO40_RS01200;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_000595626.1;transl_table=11 NZ_CP075116.1 RefSeq gene 260544 262604 . + . ID=gene-CCO40_RS01205;Name=CCO40_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01205;old_locus_tag=CCO40_01205 NZ_CP075116.1 Protein Homology CDS 260544 262604 . + 0 ID=cds-WP_094889145.1;Parent=gene-CCO40_RS01205;Dbxref=GenBank:WP_094889145.1;Name=WP_094889145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=CCO40_RS01205;product=AsmA family protein;protein_id=WP_094889145.1;transl_table=11 NZ_CP075116.1 RefSeq gene 262644 263966 . - . ID=gene-CCO40_RS01210;Name=CCO40_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01210;old_locus_tag=CCO40_01210 NZ_CP075116.1 Protein Homology CDS 262644 263966 . - 0 ID=cds-WP_079897585.1;Parent=gene-CCO40_RS01210;Dbxref=GenBank:WP_079897585.1;Name=WP_079897585.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462510.1;locus_tag=CCO40_RS01210;product=MFS transporter;protein_id=WP_079897585.1;transl_table=11 NZ_CP075116.1 RefSeq gene 264317 265345 . - . ID=gene-CCO40_RS01215;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=CCO40_RS01215;old_locus_tag=CCO40_01215 NZ_CP075116.1 Protein Homology CDS 264317 265345 . - 0 ID=cds-WP_000191230.1;Parent=gene-CCO40_RS01215;Dbxref=GenBank:WP_000191230.1;Name=WP_000191230.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462509.1;locus_tag=CCO40_RS01215;product=inner membrane protein YhjD;protein_id=WP_000191230.1;transl_table=11 NZ_CP075116.1 RefSeq gene 265418 266317 . - . ID=gene-CCO40_RS01220;Name=CCO40_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01220;old_locus_tag=CCO40_01220 NZ_CP075116.1 Protein Homology CDS 265418 266317 . - 0 ID=cds-WP_000358046.1;Parent=gene-CCO40_RS01220;Dbxref=GenBank:WP_000358046.1;Name=WP_000358046.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462508.1;locus_tag=CCO40_RS01220;product=LysR family transcriptional regulator;protein_id=WP_000358046.1;transl_table=11 NZ_CP075116.1 RefSeq gene 266948 267550 . + . ID=gene-CCO40_RS01225;Name=CCO40_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01225;old_locus_tag=CCO40_01225 NZ_CP075116.1 Protein Homology CDS 266948 267550 . + 0 ID=cds-WP_001196081.1;Parent=gene-CCO40_RS01225;Dbxref=GenBank:WP_001196081.1;Name=WP_001196081.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462507.1;locus_tag=CCO40_RS01225;product=response regulator transcription factor;protein_id=WP_001196081.1;transl_table=11 NZ_CP075116.1 RefSeq gene 267556 267912 . - . ID=gene-CCO40_RS01230;Name=CCO40_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01230;old_locus_tag=CCO40_01230 NZ_CP075116.1 Protein Homology CDS 267556 267912 . - 0 ID=cds-WP_001120251.1;Parent=gene-CCO40_RS01230;Dbxref=GenBank:WP_001120251.1;Name=WP_001120251.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462506.1;locus_tag=CCO40_RS01230;product=glycoside hydrolase family protein;protein_id=WP_001120251.1;transl_table=11 NZ_CP075116.1 RefSeq gene 268193 269782 . + . ID=gene-CCO40_RS01235;Name=CCO40_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01235;old_locus_tag=CCO40_01235 NZ_CP075116.1 Protein Homology CDS 268193 269782 . + 0 ID=cds-WP_094889146.1;Parent=gene-CCO40_RS01235;Dbxref=GenBank:WP_094889146.1;Name=WP_094889146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=CCO40_RS01235;product=STY4199 family HEPN domain-containing protein;protein_id=WP_094889146.1;transl_table=11 NZ_CP075116.1 RefSeq gene 269795 271444 . - . ID=gene-CCO40_RS01240;Name=CCO40_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01240;old_locus_tag=CCO40_01240 NZ_CP075116.1 Protein Homology CDS 269795 271444 . - 0 ID=cds-WP_000934257.1;Parent=gene-CCO40_RS01240;Dbxref=GenBank:WP_000934257.1;Name=WP_000934257.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=CCO40_RS01240;product=alpha%2Calpha-trehalase;protein_id=WP_000934257.1;transl_table=11 NZ_CP075116.1 RefSeq gene 271770 272489 . + . ID=gene-CCO40_RS01245;Name=CCO40_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01245;old_locus_tag=CCO40_01245 NZ_CP075116.1 Protein Homology CDS 271770 272489 . + 0 ID=cds-WP_000572566.1;Parent=gene-CCO40_RS01245;Dbxref=GenBank:WP_000572566.1;Name=WP_000572566.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=CCO40_RS01245;product=GntR family transcriptional regulator;protein_id=WP_000572566.1;transl_table=11 NZ_CP075116.1 RefSeq gene 272665 273642 . + . ID=gene-CCO40_RS01250;Name=fraB;gbkey=Gene;gene=fraB;gene_biotype=protein_coding;locus_tag=CCO40_RS01250;old_locus_tag=CCO40_01250 NZ_CP075116.1 Protein Homology CDS 272665 273642 . + 0 ID=cds-WP_077905336.1;Parent=gene-CCO40_RS01250;Dbxref=GenBank:WP_077905336.1;Name=WP_077905336.1;gbkey=CDS;gene=fraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462502.1;locus_tag=CCO40_RS01250;product=6-phosphofructose-aspartate deglycase;protein_id=WP_077905336.1;transl_table=11 NZ_CP075116.1 RefSeq gene 273706 274551 . + . ID=gene-CCO40_RS01255;Name=fraD;gbkey=Gene;gene=fraD;gene_biotype=protein_coding;locus_tag=CCO40_RS01255;old_locus_tag=CCO40_01255 NZ_CP075116.1 Protein Homology CDS 273706 274551 . + 0 ID=cds-WP_000028430.1;Parent=gene-CCO40_RS01255;Dbxref=GenBank:WP_000028430.1;Name=WP_000028430.1;gbkey=CDS;gene=fraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462501.1;locus_tag=CCO40_RS01255;product=fructose-aspartate kinase;protein_id=WP_000028430.1;transl_table=11 NZ_CP075116.1 RefSeq gene 274605 275924 . + . ID=gene-CCO40_RS01260;Name=CCO40_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01260;old_locus_tag=CCO40_01260 NZ_CP075116.1 Protein Homology CDS 274605 275924 . + 0 ID=cds-WP_000498935.1;Parent=gene-CCO40_RS01260;Dbxref=GenBank:WP_000498935.1;Name=WP_000498935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=CCO40_RS01260;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WP_000498935.1;transl_table=11 NZ_CP075116.1 RefSeq gene 275983 277026 . + . ID=gene-CCO40_RS01265;Name=fraE;gbkey=Gene;gene=fraE;gene_biotype=protein_coding;locus_tag=CCO40_RS01265;old_locus_tag=CCO40_01265 NZ_CP075116.1 Protein Homology CDS 275983 277026 . + 0 ID=cds-WP_000702752.1;Parent=gene-CCO40_RS01265;Dbxref=GenBank:WP_000702752.1;Name=WP_000702752.1;gbkey=CDS;gene=fraE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=CCO40_RS01265;product=fructose-asparagine asparaginase;protein_id=WP_000702752.1;transl_table=11 NZ_CP075116.1 RefSeq gene 277073 278425 . - . ID=gene-CCO40_RS01270;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=CCO40_RS01270;old_locus_tag=CCO40_01270 NZ_CP075116.1 Protein Homology CDS 277073 278425 . - 0 ID=cds-WP_000160778.1;Parent=gene-CCO40_RS01270;Dbxref=GenBank:WP_000160778.1;Name=WP_000160778.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=CCO40_RS01270;product=glutathione-disulfide reductase;protein_id=WP_000160778.1;transl_table=11 NZ_CP075116.1 RefSeq gene 278530 279372 . - . ID=gene-CCO40_RS01275;Name=CCO40_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01275;old_locus_tag=CCO40_01275 NZ_CP075116.1 Protein Homology CDS 278530 279372 . - 0 ID=cds-WP_000954233.1;Parent=gene-CCO40_RS01275;Dbxref=GenBank:WP_000954233.1;Name=WP_000954233.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=CCO40_RS01275;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_000954233.1;transl_table=11 NZ_CP075116.1 RefSeq gene 279583 280854 . + . ID=gene-CCO40_RS01280;Name=CCO40_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01280;old_locus_tag=CCO40_01280 NZ_CP075116.1 Protein Homology CDS 279583 280854 . + 0 ID=cds-WP_000766147.1;Parent=gene-CCO40_RS01280;Dbxref=GenBank:WP_000766147.1;Name=WP_000766147.1;Ontology_term=GO:0016311,GO:0003993;gbkey=CDS;go_function=acid phosphatase activity|0003993||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462496.1;locus_tag=CCO40_RS01280;product=acid phosphatase;protein_id=WP_000766147.1;transl_table=11 NZ_CP075116.1 RefSeq gene 281036 283078 . + . ID=gene-CCO40_RS01285;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=CCO40_RS01285;old_locus_tag=CCO40_01285 NZ_CP075116.1 Protein Homology CDS 281036 283078 . + 0 ID=cds-WP_094889147.1;Parent=gene-CCO40_RS01285;Dbxref=GenBank:WP_094889147.1;Name=WP_094889147.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=CCO40_RS01285;product=oligopeptidase A;protein_id=WP_094889147.1;transl_table=11 NZ_CP075116.1 RefSeq gene 283085 283843 . + . ID=gene-CCO40_RS01290;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=CCO40_RS01290;old_locus_tag=CCO40_01290 NZ_CP075116.1 Protein Homology CDS 283085 283843 . + 0 ID=cds-WP_001165129.1;Parent=gene-CCO40_RS01290;Dbxref=GenBank:WP_001165129.1;Name=WP_001165129.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=CCO40_RS01290;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_001165129.1;transl_table=11 NZ_CP075116.1 RefSeq gene 283935 285407 . - . ID=gene-CCO40_RS01295;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=CCO40_RS01295;old_locus_tag=CCO40_01295 NZ_CP075116.1 Protein Homology CDS 283935 285407 . - 0 ID=cds-WP_001098275.1;Parent=gene-CCO40_RS01295;Dbxref=GenBank:WP_001098275.1;Name=WP_001098275.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=CCO40_RS01295;product=dipeptide/tripeptide permease DtpB;protein_id=WP_001098275.1;transl_table=11 NZ_CP075116.1 RefSeq gene 285732 286166 . - . ID=gene-CCO40_RS01300;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=CCO40_RS01300;old_locus_tag=CCO40_01300 NZ_CP075116.1 Protein Homology CDS 285732 286166 . - 0 ID=cds-WP_000323565.1;Parent=gene-CCO40_RS01300;Dbxref=GenBank:WP_000323565.1;Name=WP_000323565.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462492.1;locus_tag=CCO40_RS01300;product=universal stress protein UspA;protein_id=WP_000323565.1;transl_table=11 NZ_CP075116.1 RefSeq gene 286554 286889 . + . ID=gene-CCO40_RS01305;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=CCO40_RS01305;old_locus_tag=CCO40_01305 NZ_CP075116.1 Protein Homology CDS 286554 286889 . + 0 ID=cds-WP_000626193.1;Parent=gene-CCO40_RS01305;Dbxref=GenBank:WP_000626193.1;Name=WP_000626193.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462491.1;locus_tag=CCO40_RS01305;product=universal stress protein UspB;protein_id=WP_000626193.1;transl_table=11 NZ_CP075116.1 RefSeq gene 287030 288526 . - . ID=gene-CCO40_RS01310;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=CCO40_RS01310;old_locus_tag=CCO40_01310 NZ_CP075116.1 Protein Homology CDS 287030 288526 . - 0 ID=cds-WP_000902764.1;Parent=gene-CCO40_RS01310;Dbxref=GenBank:WP_000902764.1;Name=WP_000902764.1;Ontology_term=GO:0006817,GO:0005315,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462490.1;locus_tag=CCO40_RS01310;product=inorganic phosphate transporter PitA;protein_id=WP_000902764.1;transl_table=11 NZ_CP075116.1 RefSeq gene 288757 289953 . + . ID=gene-CCO40_RS01315;Name=CCO40_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01315;old_locus_tag=CCO40_01315 NZ_CP075116.1 Protein Homology CDS 288757 289953 . + 0 ID=cds-WP_000439230.1;Parent=gene-CCO40_RS01315;Dbxref=GenBank:WP_000439230.1;Name=WP_000439230.1;Ontology_term=GO:0016628,GO:0050660,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462489.1;locus_tag=CCO40_RS01315;product=BaiN/RdsA family NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000439230.1;transl_table=11 NZ_CP075116.1 RefSeq gene 290259 291326 . + . ID=gene-CCO40_RS01320;Name=CCO40_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01320;old_locus_tag=CCO40_01320 NZ_CP075116.1 Protein Homology CDS 290259 291326 . + 0 ID=cds-WP_000359838.1;Parent=gene-CCO40_RS01320;Dbxref=GenBank:WP_000359838.1;Name=WP_000359838.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462488.1;locus_tag=CCO40_RS01320;product=HlyD family secretion protein;protein_id=WP_000359838.1;transl_table=11 NZ_CP075116.1 RefSeq gene 291323 294064 . + . ID=gene-CCO40_RS01325;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=CCO40_RS01325;old_locus_tag=CCO40_01325 NZ_CP075116.1 Protein Homology CDS 291323 294064 . + 0 ID=cds-WP_094889148.1;Parent=gene-CCO40_RS01325;Dbxref=GenBank:WP_094889148.1;Name=WP_094889148.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709254.1;locus_tag=CCO40_RS01325;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_094889148.1;transl_table=11 NZ_CP075116.1 RefSeq gene 294064 295188 . + . ID=gene-CCO40_RS01330;Name=CCO40_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01330;old_locus_tag=CCO40_01330 NZ_CP075116.1 Protein Homology CDS 294064 295188 . + 0 ID=cds-WP_001214764.1;Parent=gene-CCO40_RS01330;Dbxref=GenBank:WP_001214764.1;Name=WP_001214764.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=CCO40_RS01330;product=ABC transporter permease;protein_id=WP_001214764.1;transl_table=11 NZ_CP075116.1 RefSeq gene 295291 295692 . - . ID=gene-CCO40_RS01335;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=CCO40_RS01335;old_locus_tag=CCO40_01335 NZ_CP075116.1 Protein Homology CDS 295291 295692 . - 0 ID=cds-WP_001190057.1;Parent=gene-CCO40_RS01335;Dbxref=GenBank:WP_001190057.1;Name=WP_001190057.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462485.1;locus_tag=CCO40_RS01335;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_001190057.1;transl_table=11 NZ_CP075116.1 RefSeq gene 295784 296362 . - . ID=gene-CCO40_RS01340;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=CCO40_RS01340;old_locus_tag=CCO40_01340 NZ_CP075116.1 Protein Homology CDS 295784 296362 . - 0 ID=cds-WP_000284371.1;Parent=gene-CCO40_RS01340;Dbxref=GenBank:WP_000284371.1;Name=WP_000284371.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462484.1;locus_tag=CCO40_RS01340;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_000284371.1;transl_table=11 NZ_CP075116.1 RefSeq gene 296414 297463 . - . ID=gene-CCO40_RS01345;Name=CCO40_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01345;old_locus_tag=CCO40_01345 NZ_CP075116.1 Protein Homology CDS 296414 297463 . - 0 ID=cds-WP_000179588.1;Parent=gene-CCO40_RS01345;Dbxref=GenBank:WP_000179588.1;Name=WP_000179588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=CCO40_RS01345;product=AI-2E family transporter;protein_id=WP_000179588.1;transl_table=11 NZ_CP075116.1 RefSeq gene 297553 298812 . + . ID=gene-CCO40_RS01350;Name=CCO40_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01350;old_locus_tag=CCO40_01350 NZ_CP075116.1 Protein Homology CDS 297553 298812 . + 0 ID=cds-WP_077906124.1;Parent=gene-CCO40_RS01350;Dbxref=GenBank:WP_077906124.1;Name=WP_077906124.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462482.3;locus_tag=CCO40_RS01350;product=MFS transporter;protein_id=WP_077906124.1;transl_table=11 NZ_CP075116.1 RefSeq gene 298816 299373 . - . ID=gene-CCO40_RS01355;Name=CCO40_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01355;old_locus_tag=CCO40_01355 NZ_CP075116.1 Protein Homology CDS 298816 299373 . - 0 ID=cds-WP_001245277.1;Parent=gene-CCO40_RS01355;Dbxref=GenBank:WP_001245277.1;Name=WP_001245277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462481.1;locus_tag=CCO40_RS01355;product=DcrB family lipoprotein;protein_id=WP_001245277.1;transl_table=11 NZ_CP075116.1 RefSeq gene 299446 300111 . - . ID=gene-CCO40_RS01360;Name=CCO40_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01360;old_locus_tag=CCO40_01360 NZ_CP075116.1 Protein Homology CDS 299446 300111 . - 0 ID=cds-WP_001531644.1;Parent=gene-CCO40_RS01360;Dbxref=GenBank:WP_001531644.1;Name=WP_001531644.1;Ontology_term=GO:0160254;gbkey=CDS;go_process=tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors|0160254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462480.1;locus_tag=CCO40_RS01360;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_001531644.1;transl_table=11 NZ_CP075116.1 RefSeq gene 300281 300526 . + . ID=gene-CCO40_RS01365;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=CCO40_RS01365;old_locus_tag=CCO40_01365 NZ_CP075116.1 Protein Homology CDS 300281 300526 . + 0 ID=cds-WP_001541054.1;Parent=gene-CCO40_RS01365;Dbxref=GenBank:WP_001541054.1;Name=WP_001541054.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462479.1;locus_tag=CCO40_RS01365;product=sulfurtransferase TusA;protein_id=WP_001541054.1;transl_table=11 NZ_CP075116.1 RefSeq gene 300550 302193 . - . ID=gene-CCO40_RS01370;Name=tcp;gbkey=Gene;gene=tcp;gene_biotype=protein_coding;locus_tag=CCO40_RS01370;old_locus_tag=CCO40_01370 NZ_CP075116.1 Protein Homology CDS 300550 302193 . - 0 ID=cds-WP_000789670.1;Parent=gene-CCO40_RS01370;Dbxref=GenBank:WP_000789670.1;Name=WP_000789670.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888;gbkey=CDS;gene=tcp;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462478.1;locus_tag=CCO40_RS01370;product=methyl-accepting chemotaxis citrate transducer;protein_id=WP_000789670.1;transl_table=11 NZ_CP075116.1 RefSeq gene 302393 304591 . - . ID=gene-CCO40_RS01375;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=CCO40_RS01375;old_locus_tag=CCO40_01375 NZ_CP075116.1 Protein Homology CDS 302393 304591 . - 0 ID=cds-WP_000106647.1;Parent=gene-CCO40_RS01375;Dbxref=GenBank:WP_000106647.1;Name=WP_000106647.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462477.1;locus_tag=CCO40_RS01375;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_000106647.1;transl_table=11 NZ_CP075116.1 RefSeq gene 304672 305298 . - . ID=gene-CCO40_RS01380;Name=CCO40_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01380;old_locus_tag=CCO40_01380 NZ_CP075116.1 Protein Homology CDS 304672 305298 . - 0 ID=cds-WP_000964735.1;Parent=gene-CCO40_RS01380;Dbxref=GenBank:WP_000964735.1;Name=WP_000964735.1;Ontology_term=GO:0006629,GO:0016787,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462476.1;locus_tag=CCO40_RS01380;product=lysoplasmalogenase;protein_id=WP_000964735.1;transl_table=11 NZ_CP075116.1 RefSeq gene 305440 305811 . + . ID=gene-CCO40_RS01385;Name=CCO40_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01385;old_locus_tag=CCO40_01385 NZ_CP075116.1 Protein Homology CDS 305440 305811 . + 0 ID=cds-WP_000042851.1;Parent=gene-CCO40_RS01385;Dbxref=GenBank:WP_000042851.1;Name=WP_000042851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462475.1;locus_tag=CCO40_RS01385;product=DUF2500 domain-containing protein;protein_id=WP_000042851.1;transl_table=11 NZ_CP075116.1 RefSeq gene 305833 306102 . - . ID=gene-CCO40_RS01390;Name=CCO40_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01390;old_locus_tag=CCO40_01390 NZ_CP075116.1 Protein Homology CDS 305833 306102 . - 0 ID=cds-WP_000906759.1;Parent=gene-CCO40_RS01390;Dbxref=GenBank:WP_000906759.1;Name=WP_000906759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=CCO40_RS01390;product=DUF1145 family protein;protein_id=WP_000906759.1;transl_table=11 NZ_CP075116.1 RefSeq gene 306092 306688 . - . ID=gene-CCO40_RS01395;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=CCO40_RS01395;old_locus_tag=CCO40_01395 NZ_CP075116.1 Protein Homology CDS 306092 306688 . - 0 ID=cds-WP_000743276.1;Parent=gene-CCO40_RS01395;Dbxref=GenBank:WP_000743276.1;Name=WP_000743276.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462473.1;locus_tag=CCO40_RS01395;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_000743276.1;transl_table=11 NZ_CP075116.1 RefSeq gene 306814 308289 . + . ID=gene-CCO40_RS01400;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=CCO40_RS01400;old_locus_tag=CCO40_01400 NZ_CP075116.1 Protein Homology CDS 306814 308289 . + 0 ID=cds-WP_001118688.1;Parent=gene-CCO40_RS01400;Dbxref=GenBank:WP_001118688.1;Name=WP_001118688.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462472.1;locus_tag=CCO40_RS01400;product=signal recognition particle-docking protein FtsY;protein_id=WP_001118688.1;transl_table=11 NZ_CP075116.1 RefSeq gene 308292 308960 . + . ID=gene-CCO40_RS01405;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=CCO40_RS01405;old_locus_tag=CCO40_01405 NZ_CP075116.1 Protein Homology CDS 308292 308960 . + 0 ID=cds-WP_000617729.1;Parent=gene-CCO40_RS01405;Dbxref=GenBank:WP_000617729.1;Name=WP_000617729.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462471.1;locus_tag=CCO40_RS01405;product=cell division ATP-binding protein FtsE;protein_id=WP_000617729.1;transl_table=11 NZ_CP075116.1 RefSeq gene 308953 310008 . + . ID=gene-CCO40_RS01410;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=CCO40_RS01410;old_locus_tag=CCO40_01410 NZ_CP075116.1 Protein Homology CDS 308953 310008 . + 0 ID=cds-WP_001081707.1;Parent=gene-CCO40_RS01410;Dbxref=GenBank:WP_001081707.1;Name=WP_001081707.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=CCO40_RS01410;product=permease-like cell division protein FtsX;protein_id=WP_001081707.1;transl_table=11 NZ_CP075116.1 RefSeq gene 310254 311108 . + . ID=gene-CCO40_RS01415;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=CCO40_RS01415;old_locus_tag=CCO40_01415 NZ_CP075116.1 Protein Homology CDS 310254 311108 . + 0 ID=cds-WP_000159621.1;Parent=gene-CCO40_RS01415;Dbxref=GenBank:WP_000159621.1;Name=WP_000159621.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462469.1;locus_tag=CCO40_RS01415;product=RNA polymerase sigma factor RpoH;protein_id=WP_000159621.1;transl_table=11 NZ_CP075116.1 RefSeq gene 311430 312533 . + . ID=gene-CCO40_RS01420;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=CCO40_RS01420;old_locus_tag=CCO40_01420 NZ_CP075116.1 Protein Homology CDS 311430 312533 . + 0 ID=cds-WP_001676601.1;Parent=gene-CCO40_RS01420;Dbxref=GenBank:WP_001676601.1;Name=WP_001676601.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229277.1;locus_tag=CCO40_RS01420;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_001676601.1;transl_table=11 NZ_CP075116.1 RefSeq gene 312617 312751 . - . ID=gene-CCO40_RS01425;Name=CCO40_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01425;old_locus_tag=CCO40_01425 NZ_CP075116.1 Protein Homology CDS 312617 312751 . - 0 ID=cds-WP_001517957.1;Parent=gene-CCO40_RS01425;Dbxref=GenBank:WP_001517957.1;Name=WP_001517957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462467.1;locus_tag=CCO40_RS01425;product=hypothetical protein;protein_id=WP_001517957.1;transl_table=11 NZ_CP075116.1 RefSeq gene 312729 313112 . - . ID=gene-CCO40_RS01430;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=CCO40_RS01430;old_locus_tag=CCO40_01430 NZ_CP075116.1 Protein Homology CDS 312729 313112 . - 0 ID=cds-WP_000778873.1;Parent=gene-CCO40_RS01430;Dbxref=GenBank:WP_000778873.1;Name=WP_000778873.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462466.1;locus_tag=CCO40_RS01430;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_000778873.1;transl_table=11 NZ_CP075116.1 RefSeq gene 313534 314643 . + . ID=gene-CCO40_RS01435;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=CCO40_RS01435;old_locus_tag=CCO40_01435 NZ_CP075116.1 Protein Homology CDS 313534 314643 . + 0 ID=cds-WP_000822976.1;Parent=gene-CCO40_RS01435;Dbxref=GenBank:WP_000822976.1;Name=WP_000822976.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462465.1;locus_tag=CCO40_RS01435;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_000822976.1;transl_table=11 NZ_CP075116.1 RefSeq gene 314703 315629 . + . ID=gene-CCO40_RS01440;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=CCO40_RS01440;old_locus_tag=CCO40_01440 NZ_CP075116.1 Protein Homology CDS 314703 315629 . + 0 ID=cds-WP_000003007.1;Parent=gene-CCO40_RS01440;Dbxref=GenBank:WP_000003007.1;Name=WP_000003007.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=CCO40_RS01440;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_000003007.1;transl_table=11 NZ_CP075116.1 RefSeq gene 315626 316903 . + . ID=gene-CCO40_RS01445;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=CCO40_RS01445;old_locus_tag=CCO40_01445 NZ_CP075116.1 Protein Homology CDS 315626 316903 . + 0 ID=cds-WP_000803764.1;Parent=gene-CCO40_RS01445;Dbxref=GenBank:WP_000803764.1;Name=WP_000803764.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462463.1;locus_tag=CCO40_RS01445;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_000803764.1;transl_table=11 NZ_CP075116.1 RefSeq gene 316900 317667 . + . ID=gene-CCO40_RS01450;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=CCO40_RS01450;old_locus_tag=CCO40_01450 NZ_CP075116.1 Protein Homology CDS 316900 317667 . + 0 ID=cds-WP_000082083.1;Parent=gene-CCO40_RS01450;Dbxref=GenBank:WP_000082083.1;Name=WP_000082083.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=CCO40_RS01450;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_000082083.1;transl_table=11 NZ_CP075116.1 RefSeq gene 317669 318382 . + . ID=gene-CCO40_RS01455;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=CCO40_RS01455;old_locus_tag=CCO40_01455 NZ_CP075116.1 Protein Homology CDS 317669 318382 . + 0 ID=cds-WP_000416114.1;Parent=gene-CCO40_RS01455;Dbxref=GenBank:WP_000416114.1;Name=WP_000416114.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462461.1;locus_tag=CCO40_RS01455;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416114.1;transl_table=11 NZ_CP075116.1 RefSeq gene 318513 318734 . + . ID=gene-CCO40_RS01460;Name=CCO40_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01460;old_locus_tag=CCO40_01460 NZ_CP075116.1 Protein Homology CDS 318513 318734 . + 0 ID=cds-WP_001520924.1;Parent=gene-CCO40_RS01460;Dbxref=GenBank:WP_001520924.1;Name=WP_001520924.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229268.1;locus_tag=CCO40_RS01460;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_001520924.1;transl_table=11 NZ_CP075116.1 RefSeq gene 318731 319099 . + . ID=gene-CCO40_RS01465;Name=CCO40_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01465;old_locus_tag=CCO40_01465 NZ_CP075116.1 Protein Homology CDS 318731 319099 . + 0 ID=cds-WP_001536192.1;Parent=gene-CCO40_RS01465;Dbxref=GenBank:WP_001536192.1;Name=WP_001536192.1;Ontology_term=GO:0016301,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=kinase activity|0016301||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462459.1;locus_tag=CCO40_RS01465;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WP_001536192.1;transl_table=11 NZ_CP075116.1 RefSeq gene 319359 320675 . + . ID=gene-CCO40_RS01470;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=CCO40_RS01470;old_locus_tag=CCO40_01470 NZ_CP075116.1 Protein Homology CDS 319359 320675 . + 0 ID=cds-WP_000624747.1;Parent=gene-CCO40_RS01470;Dbxref=GenBank:WP_000624747.1;Name=WP_000624747.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462458.1;locus_tag=CCO40_RS01470;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_000624747.1;transl_table=11 NZ_CP075116.1 RefSeq gene 320780 321667 . + . ID=gene-CCO40_RS01475;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=CCO40_RS01475;old_locus_tag=CCO40_01475 NZ_CP075116.1 Protein Homology CDS 320780 321667 . + 0 ID=cds-WP_000094074.1;Parent=gene-CCO40_RS01475;Dbxref=GenBank:WP_000094074.1;Name=WP_000094074.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=CCO40_RS01475;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_000094074.1;transl_table=11 NZ_CP075116.1 RefSeq gene 321664 322509 . + . ID=gene-CCO40_RS01480;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=CCO40_RS01480;old_locus_tag=CCO40_01480 NZ_CP075116.1 Protein Homology CDS 321664 322509 . + 0 ID=cds-WP_000572196.1;Parent=gene-CCO40_RS01480;Dbxref=GenBank:WP_000572196.1;Name=WP_000572196.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=CCO40_RS01480;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_000572196.1;transl_table=11 NZ_CP075116.1 RefSeq gene 322511 323581 . + . ID=gene-CCO40_RS01485;Name=CCO40_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01485;old_locus_tag=CCO40_01485 NZ_CP075116.1 Protein Homology CDS 322511 323581 . + 0 ID=cds-WP_094889149.1;Parent=gene-CCO40_RS01485;Dbxref=GenBank:WP_094889149.1;Name=WP_094889149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462455.1;locus_tag=CCO40_RS01485;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_094889149.1;transl_table=11 NZ_CP075116.1 RefSeq gene 323578 324318 . + . ID=gene-CCO40_RS01490;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=CCO40_RS01490;old_locus_tag=CCO40_01490 NZ_CP075116.1 Protein Homology CDS 323578 324318 . + 0 ID=cds-WP_000073542.1;Parent=gene-CCO40_RS01490;Dbxref=GenBank:WP_000073542.1;Name=WP_000073542.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462454.1;locus_tag=CCO40_RS01490;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000073542.1;transl_table=11 NZ_CP075116.1 RefSeq gene 324331 324747 . - . ID=gene-CCO40_RS01495;Name=CCO40_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01495;old_locus_tag=CCO40_01495 NZ_CP075116.1 Protein Homology CDS 324331 324747 . - 0 ID=cds-WP_000826041.1;Parent=gene-CCO40_RS01495;Dbxref=GenBank:WP_000826041.1;Name=WP_000826041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462453.1;locus_tag=CCO40_RS01495;product=DUF2756 family protein;protein_id=WP_000826041.1;transl_table=11 NZ_CP075116.1 RefSeq gene 324873 326615 . + . ID=gene-CCO40_RS01500;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=CCO40_RS01500;old_locus_tag=CCO40_01500 NZ_CP075116.1 Protein Homology CDS 324873 326615 . + 0 ID=cds-WP_000805096.1;Parent=gene-CCO40_RS01500;Dbxref=GenBank:WP_000805096.1;Name=WP_000805096.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione gamma-glutamate hydrolase|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=CCO40_RS01500;product=gamma-glutamyltransferase;protein_id=WP_000805096.1;transl_table=11 NZ_CP075116.1 RefSeq gene 326660 327694 . - . ID=gene-CCO40_RS01505;Name=CCO40_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01505;old_locus_tag=CCO40_01505 NZ_CP075116.1 Protein Homology CDS 326660 327694 . - 0 ID=cds-WP_000675708.1;Parent=gene-CCO40_RS01505;Dbxref=GenBank:WP_000675708.1;Name=WP_000675708.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=CCO40_RS01505;product=phosphotriesterase family protein;protein_id=WP_000675708.1;transl_table=11 NZ_CP075116.1 RefSeq gene 327691 328662 . - . ID=gene-CCO40_RS01510;Name=CCO40_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01510;old_locus_tag=CCO40_01510 NZ_CP075116.1 Protein Homology CDS 327691 328662 . - 0 ID=cds-WP_001038949.1;Parent=gene-CCO40_RS01510;Dbxref=GenBank:WP_001038949.1;Name=WP_001038949.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462450.1;locus_tag=CCO40_RS01510;product=DMT family transporter;protein_id=WP_001038949.1;transl_table=11 NZ_CP075116.1 RefSeq gene 328716 329477 . - . ID=gene-CCO40_RS01515;Name=CCO40_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01515;old_locus_tag=CCO40_01515 NZ_CP075116.1 Protein Homology CDS 328716 329477 . - 0 ID=cds-WP_001066508.1;Parent=gene-CCO40_RS01515;Dbxref=GenBank:WP_001066508.1;Name=WP_001066508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=CCO40_RS01515;product=glutamine amidotransferase;protein_id=WP_001066508.1;transl_table=11 NZ_CP075116.1 RefSeq gene 329493 330707 . - . ID=gene-CCO40_RS01520;Name=rikA;gbkey=Gene;gene=rikA;gene_biotype=protein_coding;locus_tag=CCO40_RS01520;old_locus_tag=CCO40_01520 NZ_CP075116.1 Protein Homology CDS 329493 330707 . - 0 ID=cds-WP_000667440.1;Parent=gene-CCO40_RS01520;Dbxref=GenBank:WP_000667440.1;Name=WP_000667440.1;gbkey=CDS;gene=rikA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=CCO40_RS01520;product=PfkB family carbohydrate kinase;protein_id=WP_000667440.1;transl_table=11 NZ_CP075116.1 RefSeq gene 330972 331460 . - . ID=gene-CCO40_RS01525;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=CCO40_RS01525;old_locus_tag=CCO40_01525 NZ_CP075116.1 Protein Homology CDS 330972 331460 . - 0 ID=cds-WP_001290282.1;Parent=gene-CCO40_RS01525;Dbxref=GenBank:WP_001290282.1;Name=WP_001290282.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462447.1;locus_tag=CCO40_RS01525;product=N-acetyltransferase;protein_id=WP_001290282.1;transl_table=11 NZ_CP075116.1 RefSeq gene 331929 332966 . + . ID=gene-CCO40_RS01530;Name=CCO40_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01530;old_locus_tag=CCO40_01530 NZ_CP075116.1 Protein Homology CDS 331929 332966 . + 0 ID=cds-WP_000172397.1;Parent=gene-CCO40_RS01530;Dbxref=GenBank:WP_000172397.1;Name=WP_000172397.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=CCO40_RS01530;product=oxidoreductase;protein_id=WP_000172397.1;transl_table=11 NZ_CP075116.1 RefSeq gene 333090 333785 . + . ID=gene-CCO40_RS01535;Name=CCO40_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01535;old_locus_tag=CCO40_01535 NZ_CP075116.1 Protein Homology CDS 333090 333785 . + 0 ID=cds-WP_000639789.1;Parent=gene-CCO40_RS01535;Dbxref=GenBank:WP_000639789.1;Name=WP_000639789.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=CCO40_RS01535;product=pirin family protein;protein_id=WP_000639789.1;transl_table=11 NZ_CP075116.1 RefSeq gene 333915 334910 . + . ID=gene-CCO40_RS01540;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=CCO40_RS01540;old_locus_tag=CCO40_01540 NZ_CP075116.1 Protein Homology CDS 333915 334910 . + 0 ID=cds-WP_000730239.1;Parent=gene-CCO40_RS01540;Dbxref=GenBank:WP_000730239.1;Name=WP_000730239.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=CCO40_RS01540;product=gluconate operon transcriptional repressor GntR;protein_id=WP_000730239.1;transl_table=11 NZ_CP075116.1 RefSeq gene 335049 335582 . + . ID=gene-CCO40_RS01545;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=CCO40_RS01545;old_locus_tag=CCO40_01545 NZ_CP075116.1 Protein Homology CDS 335049 335582 . + 0 ID=cds-WP_000108342.1;Parent=gene-CCO40_RS01545;Dbxref=GenBank:WP_000108342.1;Name=WP_000108342.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462443.1;locus_tag=CCO40_RS01545;product=gluconokinase;protein_id=WP_000108342.1;transl_table=11 NZ_CP075116.1 RefSeq gene 335579 336919 . + . ID=gene-CCO40_RS01550;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=CCO40_RS01550;old_locus_tag=CCO40_01550 NZ_CP075116.1 Protein Homology CDS 335579 336919 . + 0 ID=cds-WP_000105958.1;Parent=gene-CCO40_RS01550;Dbxref=GenBank:WP_000105958.1;Name=WP_000105958.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462442.1;locus_tag=CCO40_RS01550;product=gluconate transporter;protein_id=WP_000105958.1;transl_table=11 NZ_CP075116.1 RefSeq gene 336836 337216 . - . ID=gene-CCO40_RS01555;Name=CCO40_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01555;old_locus_tag=CCO40_01555 NZ_CP075116.1 Protein Homology CDS 336836 337216 . - 0 ID=cds-WP_001737361.1;Parent=gene-CCO40_RS01555;Dbxref=GenBank:WP_001737361.1;Name=WP_001737361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_452851.1;locus_tag=CCO40_RS01555;product=MarC family protein;protein_id=WP_001737361.1;transl_table=11 NZ_CP075116.1 RefSeq gene 337343 338449 . + . ID=gene-CCO40_RS01560;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=CCO40_RS01560;old_locus_tag=CCO40_01560 NZ_CP075116.1 Protein Homology CDS 337343 338449 . + 0 ID=cds-WP_000799940.1;Parent=gene-CCO40_RS01560;Dbxref=GenBank:WP_000799940.1;Name=WP_000799940.1;Ontology_term=GO:0009085,GO:0009088,GO:0071265,GO:1901705,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase (NADP+) activity|0004073||IEA,NADP binding|0050661||IEA;go_process=L-lysine biosynthetic process|0009085||IEA,L-threonine biosynthetic process|0009088||IEA,L-methionine biosynthetic process|0071265||IEA,L-isoleucine biosynthetic process|1901705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462440.1;locus_tag=CCO40_RS01560;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799940.1;transl_table=11 NZ_CP075116.1 RefSeq gene 338796 340982 . + . ID=gene-CCO40_RS01565;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=CCO40_RS01565;old_locus_tag=CCO40_01565 NZ_CP075116.1 Protein Homology CDS 338796 340982 . + 0 ID=cds-WP_000098543.1;Parent=gene-CCO40_RS01565;Dbxref=GenBank:WP_000098543.1;Name=WP_000098543.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462439.1;locus_tag=CCO40_RS01565;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_000098543.1;transl_table=11 NZ_CP075116.1 RefSeq gene 340979 342955 . + . ID=gene-CCO40_RS01570;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=CCO40_RS01570;old_locus_tag=CCO40_01570 NZ_CP075116.1 Protein Homology CDS 340979 342955 . + 0 ID=cds-WP_000192491.1;Parent=gene-CCO40_RS01570;Dbxref=GenBank:WP_000192491.1;Name=WP_000192491.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=CCO40_RS01570;product=glycogen debranching protein GlgX;protein_id=WP_000192491.1;transl_table=11 NZ_CP075116.1 RefSeq gene 342970 344265 . + . ID=gene-CCO40_RS01575;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=CCO40_RS01575;old_locus_tag=CCO40_01575 NZ_CP075116.1 Protein Homology CDS 342970 344265 . + 0 ID=cds-WP_000253995.1;Parent=gene-CCO40_RS01575;Dbxref=GenBank:WP_000253995.1;Name=WP_000253995.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462437.1;locus_tag=CCO40_RS01575;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253995.1;transl_table=11 NZ_CP075116.1 RefSeq gene 344265 345698 . + . ID=gene-CCO40_RS01580;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=CCO40_RS01580;old_locus_tag=CCO40_01580 NZ_CP075116.1 Protein Homology CDS 344265 345698 . + 0 ID=cds-WP_001197669.1;Parent=gene-CCO40_RS01580;Dbxref=GenBank:WP_001197669.1;Name=WP_001197669.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=CCO40_RS01580;product=glycogen synthase GlgA;protein_id=WP_001197669.1;transl_table=11 NZ_CP075116.1 RefSeq gene 345718 348165 . + . ID=gene-CCO40_RS01585;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=CCO40_RS01585;old_locus_tag=CCO40_01585 NZ_CP075116.1 Protein Homology CDS 345718 348165 . + 0 ID=cds-WP_000993428.1;Parent=gene-CCO40_RS01585;Dbxref=GenBank:WP_000993428.1;Name=WP_000993428.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=CCO40_RS01585;product=glycogen phosphorylase;protein_id=WP_000993428.1;transl_table=11 NZ_CP075116.1 RefSeq gene 348343 349098 . + . ID=gene-CCO40_RS01590;Name=CCO40_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01590;old_locus_tag=CCO40_01590 NZ_CP075116.1 Protein Homology CDS 348343 349098 . + 0 ID=cds-WP_000724553.1;Parent=gene-CCO40_RS01590;Dbxref=GenBank:WP_000724553.1;Name=WP_000724553.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462434.1;locus_tag=CCO40_RS01590;product=IclR family transcriptional regulator;protein_id=WP_000724553.1;transl_table=11 NZ_CP075116.1 RefSeq gene 349142 350047 . - . ID=gene-CCO40_RS01595;Name=CCO40_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01595;old_locus_tag=CCO40_01595 NZ_CP075116.1 Protein Homology CDS 349142 350047 . - 0 ID=cds-WP_000192193.1;Parent=gene-CCO40_RS01595;Dbxref=GenBank:WP_000192193.1;Name=WP_000192193.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462433.1;locus_tag=CCO40_RS01595;product=dihydrodipicolinate synthase family protein;protein_id=WP_000192193.1;transl_table=11 NZ_CP075116.1 RefSeq gene 350091 351806 . - . ID=gene-CCO40_RS01600;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=CCO40_RS01600;old_locus_tag=CCO40_01600 NZ_CP075116.1 Protein Homology CDS 350091 351806 . - 0 ID=cds-WP_000078494.1;Parent=gene-CCO40_RS01600;Dbxref=GenBank:WP_000078494.1;Name=WP_000078494.1;Ontology_term=GO:0009099,GO:1901705,GO:0000287,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=magnesium ion binding|0000287||IEA,dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=L-valine biosynthetic process|0009099||IEA,L-isoleucine biosynthetic process|1901705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462432.1;locus_tag=CCO40_RS01600;product=dihydroxy-acid dehydratase;protein_id=WP_000078494.1;transl_table=11 NZ_CP075116.1 RefSeq gene 351803 353137 . - . ID=gene-CCO40_RS01605;Name=CCO40_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01605;old_locus_tag=CCO40_01605 NZ_CP075116.1 Protein Homology CDS 351803 353137 . - 0 ID=cds-WP_001518078.1;Parent=gene-CCO40_RS01605;Dbxref=GenBank:WP_001518078.1;Name=WP_001518078.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001653833.1;locus_tag=CCO40_RS01605;product=MFS transporter;protein_id=WP_001518078.1;transl_table=11 NZ_CP075116.1 RefSeq gene 353475 354584 . + . ID=gene-CCO40_RS01610;Name=CCO40_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01610;old_locus_tag=CCO40_01610 NZ_CP075116.1 Protein Homology CDS 353475 354584 . + 0 ID=cds-WP_000258838.1;Parent=gene-CCO40_RS01610;Dbxref=GenBank:WP_000258838.1;Name=WP_000258838.1;Ontology_term=GO:0008270,GO:0008888,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,glycerol dehydrogenase (NAD+) activity|0008888||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462431.1;locus_tag=CCO40_RS01610;product=glycerol dehydrogenase;protein_id=WP_000258838.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 354678 356236 . + . ID=gene-CCO40_RS01615;Name=CCO40_RS01615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS01615;old_locus_tag=CCO40_01615;pseudo=true NZ_CP075116.1 Protein Homology CDS 354678 356236 . + 0 ID=cds-CCO40_RS01615;Parent=gene-CCO40_RS01615;Note=frameshifted;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462430.1;locus_tag=CCO40_RS01615;product=PstS family phosphate ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 356246 356791 . + . ID=gene-CCO40_RS01620;Name=CCO40_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01620;old_locus_tag=CCO40_01620 NZ_CP075116.1 Protein Homology CDS 356246 356791 . + 0 ID=cds-WP_000393233.1;Parent=gene-CCO40_RS01620;Dbxref=GenBank:WP_000393233.1;Name=WP_000393233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462429.1;locus_tag=CCO40_RS01620;product=YbbD family protein;protein_id=WP_000393233.1;transl_table=11 NZ_CP075116.1 RefSeq gene 356838 358346 . - . ID=gene-CCO40_RS01625;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=CCO40_RS01625;old_locus_tag=CCO40_01625 NZ_CP075116.1 Protein Homology CDS 356838 358346 . - 0 ID=cds-WP_000448179.1;Parent=gene-CCO40_RS01625;Dbxref=GenBank:WP_000448179.1;Name=WP_000448179.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462428.1;locus_tag=CCO40_RS01625;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_000448179.1;transl_table=11 NZ_CP075116.1 RefSeq gene 358545 358871 . + . ID=gene-CCO40_RS01630;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=CCO40_RS01630;old_locus_tag=CCO40_01630 NZ_CP075116.1 Protein Homology CDS 358545 358871 . + 0 ID=cds-WP_000434523.1;Parent=gene-CCO40_RS01630;Dbxref=GenBank:WP_000434523.1;Name=WP_000434523.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462427.1;locus_tag=CCO40_RS01630;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000434523.1;transl_table=11 NZ_CP075116.1 RefSeq gene 358947 359777 . + . ID=gene-CCO40_RS01635;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=CCO40_RS01635;old_locus_tag=CCO40_01635 NZ_CP075116.1 Protein Homology CDS 358947 359777 . + 0 ID=cds-WP_000928699.1;Parent=gene-CCO40_RS01635;Dbxref=GenBank:WP_000928699.1;Name=WP_000928699.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462426.1;locus_tag=CCO40_RS01635;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_000928699.1;transl_table=11 NZ_CP075116.1 RefSeq gene 359871 360629 . + . ID=gene-CCO40_RS01640;Name=CCO40_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01640;old_locus_tag=CCO40_01640 NZ_CP075116.1 Protein Homology CDS 359871 360629 . + 0 ID=cds-WP_000815085.1;Parent=gene-CCO40_RS01640;Dbxref=GenBank:WP_000815085.1;Name=WP_000815085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=CCO40_RS01640;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815085.1;transl_table=11 NZ_CP075116.1 RefSeq gene 360626 362209 . - . ID=gene-CCO40_RS01645;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=CCO40_RS01645;old_locus_tag=CCO40_01645 NZ_CP075116.1 Protein Homology CDS 360626 362209 . - 0 ID=cds-WP_001232871.1;Parent=gene-CCO40_RS01645;Dbxref=GenBank:WP_001232871.1;Name=WP_001232871.1;Ontology_term=GO:0006355,GO:0003700,GO:0005524,GO:0008134;gbkey=CDS;gene=rtcR;go_function=DNA-binding transcription factor activity|0003700||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462424.1;locus_tag=CCO40_RS01645;product=RNA repair transcriptional activator RtcR;protein_id=WP_001232871.1;transl_table=11 NZ_CP075116.1 RefSeq gene 362399 363952 . + . ID=gene-CCO40_RS01650;Name=CCO40_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01650;old_locus_tag=CCO40_01650 NZ_CP075116.1 Protein Homology CDS 362399 363952 . + 0 ID=cds-WP_000013007.1;Parent=gene-CCO40_RS01650;Dbxref=GenBank:WP_000013007.1;Name=WP_000013007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462423.1;locus_tag=CCO40_RS01650;product=vWA domain-containing protein;protein_id=WP_000013007.1;transl_table=11 NZ_CP075116.1 RefSeq gene 364300 365514 . + . ID=gene-CCO40_RS01655;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=CCO40_RS01655;old_locus_tag=CCO40_01655 NZ_CP075116.1 Protein Homology CDS 364300 365514 . + 0 ID=cds-WP_001105530.1;Parent=gene-CCO40_RS01655;Dbxref=GenBank:WP_001105530.1;Name=WP_001105530.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=CCO40_RS01655;product=RNA-splicing ligase RtcB;protein_id=WP_001105530.1;transl_table=11 NZ_CP075116.1 RefSeq gene 365518 366537 . + . ID=gene-CCO40_RS01660;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=protein_coding;locus_tag=CCO40_RS01660;old_locus_tag=CCO40_01660 NZ_CP075116.1 Protein Homology CDS 365518 366537 . + 0 ID=cds-WP_045718344.1;Parent=gene-CCO40_RS01660;Dbxref=GenBank:WP_045718344.1;Name=WP_045718344.1;Ontology_term=GO:0006396,GO:0003963;gbkey=CDS;gene=rtcA;go_function=RNA-3'-phosphate cyclase activity|0003963||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462421.1;locus_tag=CCO40_RS01660;product=RNA 3'-terminal phosphate cyclase;protein_id=WP_045718344.1;transl_table=11 NZ_CP075116.1 RefSeq gene 366646 366906 . + . ID=gene-CCO40_RS01665;Name=CCO40_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01665;old_locus_tag=CCO40_01665 NZ_CP075116.1 Protein Homology CDS 366646 366906 . + 0 ID=cds-WP_000729714.1;Parent=gene-CCO40_RS01665;Dbxref=GenBank:WP_000729714.1;Name=WP_000729714.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462420.1;locus_tag=CCO40_RS01665;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_000729714.1;transl_table=11 NZ_CP075116.1 RefSeq gene 366909 367184 . + . ID=gene-CCO40_RS01670;Name=CCO40_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01670;old_locus_tag=CCO40_01670 NZ_CP075116.1 Protein Homology CDS 366909 367184 . + 0 ID=cds-WP_001682450.1;Parent=gene-CCO40_RS01670;Dbxref=GenBank:WP_001682450.1;Name=WP_001682450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462419.1;locus_tag=CCO40_RS01670;product=type II toxin-antitoxin system YafQ family toxin;protein_id=WP_001682450.1;transl_table=11 NZ_CP075116.1 RefSeq gene 367272 369977 . - . ID=gene-CCO40_RS01675;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=CCO40_RS01675;old_locus_tag=CCO40_01675 NZ_CP075116.1 Protein Homology CDS 367272 369977 . - 0 ID=cds-WP_000907043.1;Parent=gene-CCO40_RS01675;Dbxref=GenBank:WP_000907043.1;Name=WP_000907043.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=CCO40_RS01675;product=HTH-type transcriptional regulator MalT;protein_id=WP_000907043.1;transl_table=11 NZ_CP075116.1 RefSeq gene 370572 372965 . + . ID=gene-CCO40_RS01680;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=CCO40_RS01680;old_locus_tag=CCO40_01680 NZ_CP075116.1 Protein Homology CDS 370572 372965 . + 0 ID=cds-WP_094889150.1;Parent=gene-CCO40_RS01680;Dbxref=GenBank:WP_094889150.1;Name=WP_094889150.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=CCO40_RS01680;product=maltodextrin phosphorylase;protein_id=WP_094889150.1;transl_table=11 NZ_CP075116.1 RefSeq gene 372975 375053 . + . ID=gene-CCO40_RS01685;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=CCO40_RS01685;old_locus_tag=CCO40_01685 NZ_CP075116.1 Protein Homology CDS 372975 375053 . + 0 ID=cds-WP_094889151.1;Parent=gene-CCO40_RS01685;Dbxref=GenBank:WP_094889151.1;Name=WP_094889151.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462416.1;locus_tag=CCO40_RS01685;product=4-alpha-glucanotransferase;protein_id=WP_094889151.1;transl_table=11 NZ_CP075116.1 RefSeq gene 375172 376488 . - . ID=gene-CCO40_RS01690;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=CCO40_RS01690;old_locus_tag=CCO40_01690 NZ_CP075116.1 Protein Homology CDS 375172 376488 . - 0 ID=cds-WP_001131737.1;Parent=gene-CCO40_RS01690;Dbxref=GenBank:WP_001131737.1;Name=WP_001131737.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462415.1;locus_tag=CCO40_RS01690;product=gluconate transporter;protein_id=WP_001131737.1;transl_table=11 NZ_CP075116.1 RefSeq gene 376865 377440 . - . ID=gene-CCO40_RS01695;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=CCO40_RS01695;old_locus_tag=CCO40_01695 NZ_CP075116.1 Protein Homology CDS 376865 377440 . - 0 ID=cds-WP_000619387.1;Parent=gene-CCO40_RS01695;Dbxref=GenBank:WP_000619387.1;Name=WP_000619387.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=CCO40_RS01695;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619387.1;transl_table=11 NZ_CP075116.1 RefSeq gene 377499 378182 . - . ID=gene-CCO40_RS01700;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=CCO40_RS01700;old_locus_tag=CCO40_01700 NZ_CP075116.1 Protein Homology CDS 377499 378182 . - 0 ID=cds-WP_000958732.1;Parent=gene-CCO40_RS01700;Dbxref=GenBank:WP_000958732.1;Name=WP_000958732.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462413.1;locus_tag=CCO40_RS01700;product=DNA utilization protein GntX;protein_id=WP_000958732.1;transl_table=11 NZ_CP075116.1 RefSeq gene 378220 378990 . + . ID=gene-CCO40_RS01705;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=CCO40_RS01705;old_locus_tag=CCO40_01705 NZ_CP075116.1 Protein Homology CDS 378220 378990 . + 0 ID=cds-WP_000998138.1;Parent=gene-CCO40_RS01705;Dbxref=GenBank:WP_000998138.1;Name=WP_000998138.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462412.1;locus_tag=CCO40_RS01705;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_000998138.1;transl_table=11 NZ_CP075116.1 RefSeq gene 379026 379940 . - . ID=gene-CCO40_RS01710;Name=CCO40_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01710;old_locus_tag=CCO40_01710 NZ_CP075116.1 Protein Homology CDS 379026 379940 . - 0 ID=cds-WP_000235955.1;Parent=gene-CCO40_RS01710;Dbxref=GenBank:WP_000235955.1;Name=WP_000235955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462411.1;locus_tag=CCO40_RS01710;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000235955.1;transl_table=11 NZ_CP075116.1 RefSeq gene 380175 380411 . - . ID=gene-CCO40_RS01715;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=CCO40_RS01715;old_locus_tag=CCO40_01715 NZ_CP075116.1 Protein Homology CDS 380175 380411 . - 0 ID=cds-WP_000157589.1;Parent=gene-CCO40_RS01715;Dbxref=GenBank:WP_000157589.1;Name=WP_000157589.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462410.1;locus_tag=CCO40_RS01715;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_000157589.1;transl_table=11 NZ_CP075116.1 RefSeq gene 380424 382742 . - . ID=gene-CCO40_RS01720;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=CCO40_RS01720;old_locus_tag=CCO40_01720 NZ_CP075116.1 Protein Homology CDS 380424 382742 . - 0 ID=cds-WP_000736973.1;Parent=gene-CCO40_RS01720;Dbxref=GenBank:WP_000736973.1;Name=WP_000736973.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=CCO40_RS01720;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_000736973.1;transl_table=11 NZ_CP075116.1 RefSeq gene 382761 382988 . - . ID=gene-CCO40_RS01725;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=CCO40_RS01725;old_locus_tag=CCO40_01725 NZ_CP075116.1 Protein Homology CDS 382761 382988 . - 0 ID=cds-WP_001160955.1;Parent=gene-CCO40_RS01725;Dbxref=GenBank:WP_001160955.1;Name=WP_001160955.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462408.1;locus_tag=CCO40_RS01725;product=ferrous iron transporter A;protein_id=WP_001160955.1;transl_table=11 NZ_CP075116.1 RefSeq gene 383425 385755 . - . ID=gene-CCO40_RS01730;Name=CCO40_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01730;old_locus_tag=CCO40_01730 NZ_CP075116.1 Protein Homology CDS 383425 385755 . - 0 ID=cds-WP_094889152.1;Parent=gene-CCO40_RS01730;Dbxref=GenBank:WP_094889152.1;Name=WP_094889152.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312276.2;locus_tag=CCO40_RS01730;product=Tex family protein;protein_id=WP_094889152.1;transl_table=11 NZ_CP075116.1 RefSeq gene 385854 386327 . - . ID=gene-CCO40_RS01735;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=CCO40_RS01735;old_locus_tag=CCO40_01735 NZ_CP075116.1 Protein Homology CDS 385854 386327 . - 0 ID=cds-WP_000856693.1;Parent=gene-CCO40_RS01735;Dbxref=GenBank:WP_000856693.1;Name=WP_000856693.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=CCO40_RS01735;product=transcription elongation factor GreB;protein_id=WP_000856693.1;transl_table=11 NZ_CP075116.1 RefSeq gene 386553 387272 . + . ID=gene-CCO40_RS01740;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=CCO40_RS01740;old_locus_tag=CCO40_01740 NZ_CP075116.1 Protein Homology CDS 386553 387272 . + 0 ID=cds-WP_001157751.1;Parent=gene-CCO40_RS01740;Dbxref=GenBank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374840.1;locus_tag=CCO40_RS01740;product=osmolarity response regulator transcription factor OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_CP075116.1 RefSeq gene 387269 388621 . + . ID=gene-CCO40_RS01745;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=CCO40_RS01745;old_locus_tag=CCO40_01745 NZ_CP075116.1 Protein Homology CDS 387269 388621 . + 0 ID=cds-WP_001253818.1;Parent=gene-CCO40_RS01745;Dbxref=GenBank:WP_001253818.1;Name=WP_001253818.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=CCO40_RS01745;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_001253818.1;transl_table=11 NZ_CP075116.1 RefSeq gene 388696 390315 . - . ID=gene-CCO40_RS01750;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=CCO40_RS01750;old_locus_tag=CCO40_01750 NZ_CP075116.1 Protein Homology CDS 388696 390315 . - 0 ID=cds-WP_001265689.1;Parent=gene-CCO40_RS01750;Dbxref=GenBank:WP_001265689.1;Name=WP_001265689.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462403.2;locus_tag=CCO40_RS01750;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_001265689.1;transl_table=11 NZ_CP075116.1 RefSeq gene 390695 392404 . + . ID=gene-CCO40_RS01755;Name=CCO40_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01755;old_locus_tag=CCO40_01755 NZ_CP075116.1 Protein Homology CDS 390695 392404 . + 0 ID=cds-WP_094889153.1;Parent=gene-CCO40_RS01755;Dbxref=GenBank:WP_094889153.1;Name=WP_094889153.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462402.1;locus_tag=CCO40_RS01755;product=DUF4153 domain-containing protein;protein_id=WP_094889153.1;transl_table=11 NZ_CP075116.1 RefSeq gene 392515 393393 . - . ID=gene-CCO40_RS01760;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=CCO40_RS01760;old_locus_tag=CCO40_01760 NZ_CP075116.1 Protein Homology CDS 392515 393393 . - 0 ID=cds-WP_094889156.1;Parent=gene-CCO40_RS01760;Dbxref=GenBank:WP_094889156.1;Name=WP_094889156.1;Ontology_term=GO:0006457;gbkey=CDS;gene=hslO;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=CCO40_RS01760;product=Hsp33 family molecular chaperone HslO;protein_id=WP_094889156.1;transl_table=11 NZ_CP075116.1 RefSeq gene 393418 393819 . - . ID=gene-CCO40_RS01765;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=CCO40_RS01765;old_locus_tag=CCO40_01765 NZ_CP075116.1 Protein Homology CDS 393418 393819 . - 0 ID=cds-WP_000660721.1;Parent=gene-CCO40_RS01765;Dbxref=GenBank:WP_000660721.1;Name=WP_000660721.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462400.1;locus_tag=CCO40_RS01765;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_000660721.1;transl_table=11 NZ_CP075116.1 RefSeq gene 393830 394498 . - . ID=gene-CCO40_RS01770;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=CCO40_RS01770;old_locus_tag=CCO40_01770 NZ_CP075116.1 Protein Homology CDS 393830 394498 . - 0 ID=cds-WP_001520508.1;Parent=gene-CCO40_RS01770;Dbxref=GenBank:WP_001520508.1;Name=WP_001520508.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462399.1;locus_tag=CCO40_RS01770;product=GMP/IMP nucleotidase;protein_id=WP_001520508.1;transl_table=11 NZ_CP075116.1 RefSeq gene 394563 396695 . - . ID=gene-CCO40_RS01775;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=CCO40_RS01775;old_locus_tag=CCO40_01775 NZ_CP075116.1 Protein Homology CDS 394563 396695 . - 0 ID=cds-WP_000104092.1;Parent=gene-CCO40_RS01775;Dbxref=GenBank:WP_000104092.1;Name=WP_000104092.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462398.1;locus_tag=CCO40_RS01775;product=intracellular growth attenuator protein IgaA;protein_id=WP_000104092.1;transl_table=11 NZ_CP075116.1 RefSeq gene 397018 397581 . + . ID=gene-CCO40_RS01780;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=CCO40_RS01780;old_locus_tag=CCO40_01780 NZ_CP075116.1 Protein Homology CDS 397018 397581 . + 0 ID=cds-WP_000045725.1;Parent=gene-CCO40_RS01780;Dbxref=GenBank:WP_000045725.1;Name=WP_000045725.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045725.1;locus_tag=CCO40_RS01780;product=ADP compounds hydrolase NudE;protein_id=WP_000045725.1;transl_table=11 NZ_CP075116.1 RefSeq gene 397677 400229 . - . ID=gene-CCO40_RS01785;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=CCO40_RS01785;old_locus_tag=CCO40_01785 NZ_CP075116.1 Protein Homology CDS 397677 400229 . - 0 ID=cds-WP_000673819.1;Parent=gene-CCO40_RS01785;Dbxref=GenBank:WP_000673819.1;Name=WP_000673819.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=CCO40_RS01785;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_000673819.1;transl_table=11 NZ_CP075116.1 RefSeq gene 400350 401129 . + . ID=gene-CCO40_RS01790;Name=CCO40_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01790;old_locus_tag=CCO40_01790 NZ_CP075116.1 Protein Homology CDS 400350 401129 . + 0 ID=cds-WP_000874739.1;Parent=gene-CCO40_RS01790;Dbxref=GenBank:WP_000874739.1;Name=WP_000874739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462395.1;locus_tag=CCO40_RS01790;product=hypothetical protein;protein_id=WP_000874739.1;transl_table=11 NZ_CP075116.1 RefSeq gene 401129 401668 . + . ID=gene-CCO40_RS01795;Name=CCO40_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01795;old_locus_tag=CCO40_01795 NZ_CP075116.1 Protein Homology CDS 401129 401668 . + 0 ID=cds-WP_000951390.1;Parent=gene-CCO40_RS01795;Dbxref=GenBank:WP_000951390.1;Name=WP_000951390.1;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462394.1;locus_tag=CCO40_RS01795;product=PilN domain-containing protein;protein_id=WP_000951390.1;transl_table=11 NZ_CP075116.1 RefSeq gene 401652 402125 . + . ID=gene-CCO40_RS01800;Name=CCO40_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01800;old_locus_tag=CCO40_01800 NZ_CP075116.1 Protein Homology CDS 401652 402125 . + 0 ID=cds-WP_080160081.1;Parent=gene-CCO40_RS01800;Dbxref=GenBank:WP_080160081.1;Name=WP_080160081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462393.1;locus_tag=CCO40_RS01800;product=HofO family protein;protein_id=WP_080160081.1;transl_table=11 NZ_CP075116.1 RefSeq gene 402115 402516 . + . ID=gene-CCO40_RS01805;Name=CCO40_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01805;old_locus_tag=CCO40_01805 NZ_CP075116.1 Protein Homology CDS 402115 402516 . + 0 ID=cds-WP_000648115.1;Parent=gene-CCO40_RS01805;Dbxref=GenBank:WP_000648115.1;Name=WP_000648115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462392.1;locus_tag=CCO40_RS01805;product=HofP DNA utilization family protein;protein_id=WP_000648115.1;transl_table=11 NZ_CP075116.1 RefSeq gene 402431 403669 . + . ID=gene-CCO40_RS01810;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=CCO40_RS01810;old_locus_tag=CCO40_01810 NZ_CP075116.1 Protein Homology CDS 402431 403669 . + 0 ID=cds-WP_000832803.1;Parent=gene-CCO40_RS01810;Dbxref=GenBank:WP_000832803.1;Name=WP_000832803.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462391.1;locus_tag=CCO40_RS01810;product=DNA uptake porin HofQ;protein_id=WP_000832803.1;transl_table=11 NZ_CP075116.1 RefSeq gene 404134 404655 . + . ID=gene-CCO40_RS01815;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=CCO40_RS01815;old_locus_tag=CCO40_01815 NZ_CP075116.1 Protein Homology CDS 404134 404655 . + 0 ID=cds-WP_000818621.1;Parent=gene-CCO40_RS01815;Dbxref=GenBank:WP_000818621.1;Name=WP_000818621.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=CCO40_RS01815;product=shikimate kinase AroK;protein_id=WP_000818621.1;transl_table=11 NZ_CP075116.1 RefSeq gene 404712 405800 . + . ID=gene-CCO40_RS01820;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=CCO40_RS01820;old_locus_tag=CCO40_01820 NZ_CP075116.1 Protein Homology CDS 404712 405800 . + 0 ID=cds-WP_000439824.1;Parent=gene-CCO40_RS01820;Dbxref=GenBank:WP_000439824.1;Name=WP_000439824.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462389.1;locus_tag=CCO40_RS01820;product=3-dehydroquinate synthase;protein_id=WP_000439824.1;transl_table=11 NZ_CP075116.1 RefSeq gene 405898 407175 . + . ID=gene-CCO40_RS01825;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=CCO40_RS01825;old_locus_tag=CCO40_01825 NZ_CP075116.1 Protein Homology CDS 405898 407175 . + 0 ID=cds-WP_000343147.1;Parent=gene-CCO40_RS01825;Dbxref=GenBank:WP_000343147.1;Name=WP_000343147.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462388.1;locus_tag=CCO40_RS01825;product=cell division protein DamX;protein_id=WP_000343147.1;transl_table=11 NZ_CP075116.1 RefSeq gene 407356 408192 . + . ID=gene-CCO40_RS01830;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=CCO40_RS01830;old_locus_tag=CCO40_01830 NZ_CP075116.1 Protein Homology CDS 407356 408192 . + 0 ID=cds-WP_000742132.1;Parent=gene-CCO40_RS01830;Dbxref=GenBank:WP_000742132.1;Name=WP_000742132.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462387.1;locus_tag=CCO40_RS01830;product=adenine-specific DNA-methyltransferase;protein_id=WP_000742132.1;transl_table=11 NZ_CP075116.1 RefSeq gene 408210 408887 . + . ID=gene-CCO40_RS01835;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=CCO40_RS01835;old_locus_tag=CCO40_01835 NZ_CP075116.1 Protein Homology CDS 408210 408887 . + 0 ID=cds-WP_000816286.1;Parent=gene-CCO40_RS01835;Dbxref=GenBank:WP_000816286.1;Name=WP_000816286.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462386.1;locus_tag=CCO40_RS01835;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816286.1;transl_table=11 NZ_CP075116.1 RefSeq gene 408880 409638 . + . ID=gene-CCO40_RS01840;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=CCO40_RS01840;old_locus_tag=CCO40_01840 NZ_CP075116.1 Protein Homology CDS 408880 409638 . + 0 ID=cds-WP_000359652.1;Parent=gene-CCO40_RS01840;Dbxref=GenBank:WP_000359652.1;Name=WP_000359652.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462385.1;locus_tag=CCO40_RS01840;product=phosphoglycolate phosphatase;protein_id=WP_000359652.1;transl_table=11 NZ_CP075116.1 RefSeq gene 409631 410635 . + . ID=gene-CCO40_RS01845;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CCO40_RS01845;old_locus_tag=CCO40_01845 NZ_CP075116.1 Protein Homology CDS 409631 410635 . + 0 ID=cds-WP_000165562.1;Parent=gene-CCO40_RS01845;Dbxref=GenBank:WP_000165562.1;Name=WP_000165562.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462384.1;locus_tag=CCO40_RS01845;product=tryptophan--tRNA ligase;protein_id=WP_000165562.1;transl_table=11 NZ_CP075116.1 RefSeq gene 410780 410950 . - . ID=gene-CCO40_RS01850;Name=CCO40_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01850;old_locus_tag=CCO40_01850 NZ_CP075116.1 Protein Homology CDS 410780 410950 . - 0 ID=cds-WP_000472323.1;Parent=gene-CCO40_RS01850;Dbxref=GenBank:WP_000472323.1;Name=WP_000472323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462383.1;locus_tag=CCO40_RS01850;product=YhfL family protein;protein_id=WP_000472323.1;transl_table=11 NZ_CP075116.1 RefSeq gene 411143 417028 . - . ID=gene-CCO40_RS01855;Name=CCO40_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01855;old_locus_tag=CCO40_01855 NZ_CP075116.1 Protein Homology CDS 411143 417028 . - 0 ID=cds-WP_444435413.1;Parent=gene-CCO40_RS01855;Dbxref=GenBank:WP_444435413.1;Name=WP_444435413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747946.1;locus_tag=CCO40_RS01855;product=pectate lyase-fold domain-containing protein;protein_id=WP_444435413.1;transl_table=11 NZ_CP075116.1 RefSeq gene 417366 418739 . - . ID=gene-CCO40_RS01860;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=CCO40_RS01860;old_locus_tag=CCO40_01860 NZ_CP075116.1 Protein Homology CDS 417366 418739 . - 0 ID=cds-WP_000349897.1;Parent=gene-CCO40_RS01860;Dbxref=GenBank:WP_000349897.1;Name=WP_000349897.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=CCO40_RS01860;product=siroheme synthase CysG;protein_id=WP_000349897.1;transl_table=11 NZ_CP075116.1 RefSeq gene 418751 419560 . - . ID=gene-CCO40_RS01865;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=CCO40_RS01865;old_locus_tag=CCO40_01865 NZ_CP075116.1 Protein Homology CDS 418751 419560 . - 0 ID=cds-WP_000493576.1;Parent=gene-CCO40_RS01865;Dbxref=GenBank:WP_000493576.1;Name=WP_000493576.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462379.1;locus_tag=CCO40_RS01865;product=nitrite transporter NirC;protein_id=WP_000493576.1;transl_table=11 NZ_CP075116.1 RefSeq gene 419743 420069 . - . ID=gene-CCO40_RS01870;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=CCO40_RS01870;old_locus_tag=CCO40_01870 NZ_CP075116.1 Protein Homology CDS 419743 420069 . - 0 ID=cds-WP_000084814.1;Parent=gene-CCO40_RS01870;Dbxref=GenBank:WP_000084814.1;Name=WP_000084814.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462378.1;locus_tag=CCO40_RS01870;product=nitrite reductase small subunit NirD;protein_id=WP_000084814.1;transl_table=11 NZ_CP075116.1 RefSeq gene 420066 422609 . - . ID=gene-CCO40_RS01875;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=CCO40_RS01875;old_locus_tag=CCO40_01875 NZ_CP075116.1 Protein Homology CDS 420066 422609 . - 0 ID=cds-WP_094889155.1;Parent=gene-CCO40_RS01875;Dbxref=GenBank:WP_094889155.1;Name=WP_094889155.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=CCO40_RS01875;product=NADPH-nitrite reductase large subunit;protein_id=WP_094889155.1;transl_table=11 NZ_CP075116.1 RefSeq gene 422927 424108 . - . ID=gene-CCO40_RS01880;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=CCO40_RS01880;old_locus_tag=CCO40_01880 NZ_CP075116.1 Protein Homology CDS 422927 424108 . - 0 ID=cds-WP_001650877.1;Parent=gene-CCO40_RS01880;Dbxref=GenBank:WP_001650877.1;Name=WP_001650877.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462376.1;locus_tag=CCO40_RS01880;product=MFS transporter TsgA;protein_id=WP_001650877.1;transl_table=11 NZ_CP075116.1 RefSeq gene 424385 424957 . + . ID=gene-CCO40_RS01885;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=CCO40_RS01885;old_locus_tag=CCO40_01885 NZ_CP075116.1 Protein Homology CDS 424385 424957 . + 0 ID=cds-WP_079809788.1;Parent=gene-CCO40_RS01885;Dbxref=GenBank:WP_079809788.1;Name=WP_079809788.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=CCO40_RS01885;product=peptidylprolyl isomerase A;protein_id=WP_079809788.1;transl_table=11 NZ_CP075116.1 RefSeq gene 425066 425233 . + . ID=gene-CCO40_RS01890;Name=ficA;gbkey=Gene;gene=ficA;gene_biotype=protein_coding;gene_synonym=yhfG;locus_tag=CCO40_RS01890;old_locus_tag=CCO40_01890 NZ_CP075116.1 Protein Homology CDS 425066 425233 . + 0 ID=cds-WP_001521109.1;Parent=gene-CCO40_RS01890;Dbxref=GenBank:WP_001521109.1;Name=WP_001521109.1;gbkey=CDS;gene=ficA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462374.1;locus_tag=CCO40_RS01890;product=FicA/YhfG family antitoxin;protein_id=WP_001521109.1;transl_table=11 NZ_CP075116.1 RefSeq gene 425223 425825 . + . ID=gene-CCO40_RS01895;Name=CCO40_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01895;old_locus_tag=CCO40_01895 NZ_CP075116.1 Protein Homology CDS 425223 425825 . + 0 ID=cds-WP_001280675.1;Parent=gene-CCO40_RS01895;Dbxref=GenBank:WP_001280675.1;Name=WP_001280675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=CCO40_RS01895;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_001280675.1;transl_table=11 NZ_CP075116.1 RefSeq gene 425857 426420 . + . ID=gene-CCO40_RS01900;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=CCO40_RS01900;old_locus_tag=CCO40_01900 NZ_CP075116.1 Protein Homology CDS 425857 426420 . + 0 ID=cds-WP_000601882.1;Parent=gene-CCO40_RS01900;Dbxref=GenBank:WP_000601882.1;Name=WP_000601882.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462372.1;locus_tag=CCO40_RS01900;product=aminodeoxychorismate synthase component 2;protein_id=WP_000601882.1;transl_table=11 NZ_CP075116.1 RefSeq gene 426506 427723 . + . ID=gene-CCO40_RS01905;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=CCO40_RS01905;old_locus_tag=CCO40_01905 NZ_CP075116.1 Protein Homology CDS 426506 427723 . + 0 ID=cds-WP_000190023.1;Parent=gene-CCO40_RS01905;Dbxref=GenBank:WP_000190023.1;Name=WP_000190023.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=CCO40_RS01905;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_000190023.1;transl_table=11 NZ_CP075116.1 RefSeq gene 427766 429853 . - . ID=gene-CCO40_RS01910;Name=CCO40_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01910;old_locus_tag=CCO40_01910 NZ_CP075116.1 Protein Homology CDS 427766 429853 . - 0 ID=cds-WP_000269315.1;Parent=gene-CCO40_RS01910;Dbxref=GenBank:WP_000269315.1;Name=WP_000269315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462370.1;locus_tag=CCO40_RS01910;product=YccS/YhfK family putative transporter;protein_id=WP_000269315.1;transl_table=11 NZ_CP075116.1 RefSeq gene 429902 430534 . - . ID=gene-CCO40_RS01915;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=CCO40_RS01915;old_locus_tag=CCO40_01915 NZ_CP075116.1 Protein Homology CDS 429902 430534 . - 0 ID=cds-WP_000242758.1;Parent=gene-CCO40_RS01915;Dbxref=GenBank:WP_000242758.1;Name=WP_000242758.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=CCO40_RS01915;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242758.1;transl_table=11 NZ_CP075116.1 RefSeq gene 430842 431246 . + . ID=gene-CCO40_RS01920;Name=CCO40_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01920;old_locus_tag=CCO40_01920 NZ_CP075116.1 Protein Homology CDS 430842 431246 . + 0 ID=cds-WP_001148919.1;Parent=gene-CCO40_RS01920;Dbxref=GenBank:WP_001148919.1;Name=WP_001148919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462368.1;locus_tag=CCO40_RS01920;product=OsmC family protein;protein_id=WP_001148919.1;transl_table=11 NZ_CP075116.1 RefSeq gene 431342 432211 . - . ID=gene-CCO40_RS01925;Name=CCO40_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01925;old_locus_tag=CCO40_01925 NZ_CP075116.1 Protein Homology CDS 431342 432211 . - 0 ID=cds-WP_001274690.1;Parent=gene-CCO40_RS01925;Dbxref=GenBank:WP_001274690.1;Name=WP_001274690.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462367.1;locus_tag=CCO40_RS01925;product=phosphoribulokinase;protein_id=WP_001274690.1;transl_table=11 NZ_CP075116.1 RefSeq gene 432263 432481 . - . ID=gene-CCO40_RS01930;Name=CCO40_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01930;old_locus_tag=CCO40_01930 NZ_CP075116.1 Protein Homology CDS 432263 432481 . - 0 ID=cds-WP_000586568.1;Parent=gene-CCO40_RS01930;Dbxref=GenBank:WP_000586568.1;Name=WP_000586568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=CCO40_RS01930;product=YheU family protein;protein_id=WP_000586568.1;transl_table=11 NZ_CP075116.1 RefSeq gene 432478 433545 . - . ID=gene-CCO40_RS01935;Name=CCO40_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01935;old_locus_tag=CCO40_01935 NZ_CP075116.1 Protein Homology CDS 432478 433545 . - 0 ID=cds-WP_001214111.1;Parent=gene-CCO40_RS01935;Dbxref=GenBank:WP_001214111.1;Name=WP_001214111.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=CCO40_RS01935;product=hydrolase;protein_id=WP_001214111.1;transl_table=11 NZ_CP075116.1 RefSeq gene 433743 434054 . + . ID=gene-CCO40_RS01940;Name=CCO40_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01940;old_locus_tag=CCO40_01940 NZ_CP075116.1 Protein Homology CDS 433743 434054 . + 0 ID=cds-WP_000047690.1;Parent=gene-CCO40_RS01940;Dbxref=GenBank:WP_000047690.1;Name=WP_000047690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462364.1;locus_tag=CCO40_RS01940;product=monooxygenase;protein_id=WP_000047690.1;transl_table=11 NZ_CP075116.1 RefSeq gene 434056 434277 . - . ID=gene-CCO40_RS01945;Name=CCO40_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01945;old_locus_tag=CCO40_01945 NZ_CP075116.1 Protein Homology CDS 434056 434277 . - 0 ID=cds-WP_001054041.1;Parent=gene-CCO40_RS01945;Dbxref=GenBank:WP_001054041.1;Name=WP_001054041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=CCO40_RS01945;product=hypothetical protein;protein_id=WP_001054041.1;transl_table=11 NZ_CP075116.1 RefSeq gene 434440 436347 . - . ID=gene-CCO40_RS01950;Name=CCO40_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01950;old_locus_tag=CCO40_01950 NZ_CP075116.1 Protein Homology CDS 434440 436347 . - 0 ID=cds-WP_000634757.1;Parent=gene-CCO40_RS01950;Dbxref=GenBank:WP_000634757.1;Name=WP_000634757.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462363.1;locus_tag=CCO40_RS01950;product=ABC transporter ATP-binding protein;protein_id=WP_000634757.1;transl_table=11 NZ_CP075116.1 RefSeq gene 436613 437164 . + . ID=gene-CCO40_RS01955;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=CCO40_RS01955;old_locus_tag=CCO40_01955 NZ_CP075116.1 Protein Homology CDS 436613 437164 . + 0 ID=cds-WP_000081820.1;Parent=gene-CCO40_RS01955;Dbxref=GenBank:WP_000081820.1;Name=WP_000081820.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462362.1;locus_tag=CCO40_RS01955;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_000081820.1;transl_table=11 NZ_CP075116.1 RefSeq gene 437164 438969 . + . ID=gene-CCO40_RS01960;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=CCO40_RS01960;old_locus_tag=CCO40_01960 NZ_CP075116.1 Protein Homology CDS 437164 438969 . + 0 ID=cds-WP_000398141.1;Parent=gene-CCO40_RS01960;Dbxref=GenBank:WP_000398141.1;Name=WP_000398141.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=CCO40_RS01960;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_000398141.1;transl_table=11 NZ_CP075116.1 RefSeq gene 438979 439179 . + . ID=gene-CCO40_RS01965;Name=CCO40_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01965;old_locus_tag=CCO40_01965 NZ_CP075116.1 Protein Homology CDS 438979 439179 . + 0 ID=cds-WP_001007735.1;Parent=gene-CCO40_RS01965;Dbxref=GenBank:WP_001007735.1;Name=WP_001007735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462360.1;locus_tag=CCO40_RS01965;product=YheV family putative zinc ribbon protein;protein_id=WP_001007735.1;transl_table=11 NZ_CP075116.1 RefSeq gene 439274 439864 . + . ID=gene-CCO40_RS01970;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=CCO40_RS01970;old_locus_tag=CCO40_01970 NZ_CP075116.1 Protein Homology CDS 439274 439864 . + 0 ID=cds-WP_000861341.1;Parent=gene-CCO40_RS01970;Dbxref=GenBank:WP_000861341.1;Name=WP_000861341.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462359.1;locus_tag=CCO40_RS01970;product=peptidylprolyl isomerase;protein_id=WP_000861341.1;transl_table=11 NZ_CP075116.1 RefSeq gene 440052 440270 . - . ID=gene-CCO40_RS01975;Name=CCO40_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01975;old_locus_tag=CCO40_01975 NZ_CP075116.1 Protein Homology CDS 440052 440270 . - 0 ID=cds-WP_001152701.1;Parent=gene-CCO40_RS01975;Dbxref=GenBank:WP_001152701.1;Name=WP_001152701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=CCO40_RS01975;product=protein SlyX;protein_id=WP_001152701.1;transl_table=11 NZ_CP075116.1 RefSeq gene 440490 441308 . + . ID=gene-CCO40_RS01980;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=CCO40_RS01980;old_locus_tag=CCO40_01980 NZ_CP075116.1 Protein Homology CDS 440490 441308 . + 0 ID=cds-WP_000838222.1;Parent=gene-CCO40_RS01980;Dbxref=GenBank:WP_000838222.1;Name=WP_000838222.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=CCO40_RS01980;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838222.1;transl_table=11 NZ_CP075116.1 RefSeq gene 441584 442306 . + . ID=gene-CCO40_RS01985;Name=CCO40_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS01985;old_locus_tag=CCO40_01985 NZ_CP075116.1 Protein Homology CDS 441584 442306 . + 0 ID=cds-WP_000091471.1;Parent=gene-CCO40_RS01985;Dbxref=GenBank:WP_000091471.1;Name=WP_000091471.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462356.1;locus_tag=CCO40_RS01985;product=helix-turn-helix transcriptional regulator;protein_id=WP_000091471.1;transl_table=11 NZ_CP075116.1 RefSeq gene 442306 442692 . + . ID=gene-CCO40_RS01990;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=CCO40_RS01990;old_locus_tag=CCO40_01990 NZ_CP075116.1 Protein Homology CDS 442306 442692 . + 0 ID=cds-WP_001268010.1;Parent=gene-CCO40_RS01990;Dbxref=GenBank:WP_001268010.1;Name=WP_001268010.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462355.1;locus_tag=CCO40_RS01990;product=sulfurtransferase complex subunit TusD;protein_id=WP_001268010.1;transl_table=11 NZ_CP075116.1 RefSeq gene 442692 443048 . + . ID=gene-CCO40_RS01995;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=CCO40_RS01995;old_locus_tag=CCO40_01995 NZ_CP075116.1 Protein Homology CDS 442692 443048 . + 0 ID=cds-WP_000820705.1;Parent=gene-CCO40_RS01995;Dbxref=GenBank:WP_000820705.1;Name=WP_000820705.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462354.1;locus_tag=CCO40_RS01995;product=sulfurtransferase complex subunit TusC;protein_id=WP_000820705.1;transl_table=11 NZ_CP075116.1 RefSeq gene 443056 443343 . + . ID=gene-CCO40_RS02000;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=CCO40_RS02000;old_locus_tag=CCO40_02000 NZ_CP075116.1 Protein Homology CDS 443056 443343 . + 0 ID=cds-WP_000903400.1;Parent=gene-CCO40_RS02000;Dbxref=GenBank:WP_000903400.1;Name=WP_000903400.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462353.1;locus_tag=CCO40_RS02000;product=sulfurtransferase complex subunit TusB;protein_id=WP_000903400.1;transl_table=11 NZ_CP075116.1 RefSeq gene 443469 443843 . + . ID=gene-CCO40_RS02005;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=CCO40_RS02005;old_locus_tag=CCO40_02005 NZ_CP075116.1 Protein Homology CDS 443469 443843 . + 0 ID=cds-WP_000246815.1;Parent=gene-CCO40_RS02005;Dbxref=GenBank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=CCO40_RS02005;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11 NZ_CP075116.1 RefSeq gene 443939 444409 . + . ID=gene-CCO40_RS02010;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=CCO40_RS02010;old_locus_tag=CCO40_02010 NZ_CP075116.1 Protein Homology CDS 443939 444409 . + 0 ID=cds-WP_001138042.1;Parent=gene-CCO40_RS02010;Dbxref=GenBank:WP_001138042.1;Name=WP_001138042.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=CCO40_RS02010;product=30S ribosomal protein S7;protein_id=WP_001138042.1;transl_table=11 NZ_CP075116.1 RefSeq gene 444506 446620 . + . ID=gene-CCO40_RS02015;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=CCO40_RS02015;old_locus_tag=CCO40_02015 NZ_CP075116.1 Protein Homology CDS 444506 446620 . + 0 ID=cds-WP_000124693.1;Parent=gene-CCO40_RS02015;Dbxref=GenBank:WP_000124693.1;Name=WP_000124693.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=CCO40_RS02015;product=elongation factor G;protein_id=WP_000124693.1;transl_table=11 NZ_CP075116.1 RefSeq gene 446692 447876 . + . ID=gene-CCO40_RS02020;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=CCO40_RS02020;old_locus_tag=CCO40_02020 NZ_CP075116.1 Protein Homology CDS 446692 447876 . + 0 ID=cds-WP_000031748.1;Parent=gene-CCO40_RS02020;Dbxref=GenBank:WP_000031748.1;Name=WP_000031748.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=CCO40_RS02020;product=elongation factor Tu;protein_id=WP_000031748.1;transl_table=11 NZ_CP075116.1 RefSeq gene 448061 448255 . + . ID=gene-CCO40_RS02025;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=CCO40_RS02025;old_locus_tag=CCO40_02025 NZ_CP075116.1 Protein Homology CDS 448061 448255 . + 0 ID=cds-WP_000289082.1;Parent=gene-CCO40_RS02025;Dbxref=GenBank:WP_000289082.1;Name=WP_000289082.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462348.1;locus_tag=CCO40_RS02025;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289082.1;transl_table=11 NZ_CP075116.1 RefSeq gene 448328 448804 . + . ID=gene-CCO40_RS02030;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=CCO40_RS02030;old_locus_tag=CCO40_02030 NZ_CP075116.1 Protein Homology CDS 448328 448804 . + 0 ID=cds-WP_000675530.1;Parent=gene-CCO40_RS02030;Dbxref=GenBank:WP_000675530.1;Name=WP_000675530.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462347.1;locus_tag=CCO40_RS02030;product=bacterioferritin;protein_id=WP_000675530.1;transl_table=11 NZ_CP075116.1 RefSeq gene 448801 449268 . - . ID=gene-CCO40_RS02035;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=CCO40_RS02035;old_locus_tag=CCO40_02035 NZ_CP075116.1 Protein Homology CDS 448801 449268 . - 0 ID=cds-WP_000495849.1;Parent=gene-CCO40_RS02035;Dbxref=GenBank:WP_000495849.1;Name=WP_000495849.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462346.1;locus_tag=CCO40_RS02035;product=prepilin peptidase;protein_id=WP_000495849.1;transl_table=11 NZ_CP075116.1 RefSeq gene 449648 449959 . + . ID=gene-CCO40_RS02040;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=CCO40_RS02040;old_locus_tag=CCO40_02040 NZ_CP075116.1 Protein Homology CDS 449648 449959 . + 0 ID=cds-WP_001181005.1;Parent=gene-CCO40_RS02040;Dbxref=GenBank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=CCO40_RS02040;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NZ_CP075116.1 RefSeq gene 449992 450621 . + . ID=gene-CCO40_RS02045;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=CCO40_RS02045;old_locus_tag=CCO40_02045 NZ_CP075116.1 Protein Homology CDS 449992 450621 . + 0 ID=cds-WP_000579838.1;Parent=gene-CCO40_RS02045;Dbxref=GenBank:WP_000579838.1;Name=WP_000579838.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=CCO40_RS02045;product=50S ribosomal protein L3;protein_id=WP_000579838.1;transl_table=11 NZ_CP075116.1 RefSeq gene 450632 451237 . + . ID=gene-CCO40_RS02050;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=CCO40_RS02050;old_locus_tag=CCO40_02050 NZ_CP075116.1 Protein Homology CDS 450632 451237 . + 0 ID=cds-WP_000424395.1;Parent=gene-CCO40_RS02050;Dbxref=GenBank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=CCO40_RS02050;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11 NZ_CP075116.1 RefSeq gene 451234 451536 . + . ID=gene-CCO40_RS02055;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=CCO40_RS02055;old_locus_tag=CCO40_02055 NZ_CP075116.1 Protein Homology CDS 451234 451536 . + 0 ID=cds-WP_000617546.1;Parent=gene-CCO40_RS02055;Dbxref=GenBank:WP_000617546.1;Name=WP_000617546.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=CCO40_RS02055;product=50S ribosomal protein L23;protein_id=WP_000617546.1;transl_table=11 NZ_CP075116.1 RefSeq gene 451554 452375 . + . ID=gene-CCO40_RS02060;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=CCO40_RS02060;old_locus_tag=CCO40_02060 NZ_CP075116.1 Protein Homology CDS 451554 452375 . + 0 ID=cds-WP_000301869.1;Parent=gene-CCO40_RS02060;Dbxref=GenBank:WP_000301869.1;Name=WP_000301869.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=CCO40_RS02060;product=50S ribosomal protein L2;protein_id=WP_000301869.1;transl_table=11 NZ_CP075116.1 RefSeq gene 452392 452670 . + . ID=gene-CCO40_RS02065;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=CCO40_RS02065;old_locus_tag=CCO40_02065 NZ_CP075116.1 Protein Homology CDS 452392 452670 . + 0 ID=cds-WP_001138115.1;Parent=gene-CCO40_RS02065;Dbxref=GenBank:WP_001138115.1;Name=WP_001138115.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=CCO40_RS02065;product=30S ribosomal protein S19;protein_id=WP_001138115.1;transl_table=11 NZ_CP075116.1 RefSeq gene 452685 453017 . + . ID=gene-CCO40_RS02070;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=CCO40_RS02070;old_locus_tag=CCO40_02070 NZ_CP075116.1 Protein Homology CDS 452685 453017 . + 0 ID=cds-WP_000447529.1;Parent=gene-CCO40_RS02070;Dbxref=GenBank:WP_000447529.1;Name=WP_000447529.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=CCO40_RS02070;product=50S ribosomal protein L22;protein_id=WP_000447529.1;transl_table=11 NZ_CP075116.1 RefSeq gene 453035 453736 . + . ID=gene-CCO40_RS02075;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=CCO40_RS02075;old_locus_tag=CCO40_02075 NZ_CP075116.1 Protein Homology CDS 453035 453736 . + 0 ID=cds-WP_000529945.1;Parent=gene-CCO40_RS02075;Dbxref=GenBank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=CCO40_RS02075;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11 NZ_CP075116.1 RefSeq gene 453749 454159 . + . ID=gene-CCO40_RS02080;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=CCO40_RS02080;old_locus_tag=CCO40_02080 NZ_CP075116.1 Protein Homology CDS 453749 454159 . + 0 ID=cds-WP_000941208.1;Parent=gene-CCO40_RS02080;Dbxref=GenBank:WP_000941208.1;Name=WP_000941208.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=CCO40_RS02080;product=50S ribosomal protein L16;protein_id=WP_000941208.1;transl_table=11 NZ_CP075116.1 RefSeq gene 454159 454350 . + . ID=gene-CCO40_RS02085;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=CCO40_RS02085;old_locus_tag=CCO40_02085 NZ_CP075116.1 Protein Homology CDS 454159 454350 . + 0 ID=cds-WP_000644742.1;Parent=gene-CCO40_RS02085;Dbxref=GenBank:WP_000644742.1;Name=WP_000644742.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=CCO40_RS02085;product=50S ribosomal protein L29;protein_id=WP_000644742.1;transl_table=11 NZ_CP075116.1 RefSeq gene 454350 454604 . + . ID=gene-CCO40_RS02090;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=CCO40_RS02090;old_locus_tag=CCO40_02090 NZ_CP075116.1 Protein Homology CDS 454350 454604 . + 0 ID=cds-WP_000130101.1;Parent=gene-CCO40_RS02090;Dbxref=GenBank:WP_000130101.1;Name=WP_000130101.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=CCO40_RS02090;product=30S ribosomal protein S17;protein_id=WP_000130101.1;transl_table=11 NZ_CP075116.1 RefSeq gene 454768 455139 . + . ID=gene-CCO40_RS02095;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=CCO40_RS02095;old_locus_tag=CCO40_02095 NZ_CP075116.1 Protein Homology CDS 454768 455139 . + 0 ID=cds-WP_000613954.1;Parent=gene-CCO40_RS02095;Dbxref=GenBank:WP_000613954.1;Name=WP_000613954.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=CCO40_RS02095;product=50S ribosomal protein L14;protein_id=WP_000613954.1;transl_table=11 NZ_CP075116.1 RefSeq gene 455150 455464 . + . ID=gene-CCO40_RS02100;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=CCO40_RS02100;old_locus_tag=CCO40_02100 NZ_CP075116.1 Protein Homology CDS 455150 455464 . + 0 ID=cds-WP_000729185.1;Parent=gene-CCO40_RS02100;Dbxref=GenBank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=CCO40_RS02100;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11 NZ_CP075116.1 RefSeq gene 455479 456018 . + . ID=gene-CCO40_RS02105;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=CCO40_RS02105;old_locus_tag=CCO40_02105 NZ_CP075116.1 Protein Homology CDS 455479 456018 . + 0 ID=cds-WP_001096206.1;Parent=gene-CCO40_RS02105;Dbxref=GenBank:WP_001096206.1;Name=WP_001096206.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=CCO40_RS02105;product=50S ribosomal protein L5;protein_id=WP_001096206.1;transl_table=11 NZ_CP075116.1 RefSeq gene 456033 456338 . + . ID=gene-CCO40_RS02110;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=CCO40_RS02110;old_locus_tag=CCO40_02110 NZ_CP075116.1 Protein Homology CDS 456033 456338 . + 0 ID=cds-WP_001118932.1;Parent=gene-CCO40_RS02110;Dbxref=GenBank:WP_001118932.1;Name=WP_001118932.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=CCO40_RS02110;product=30S ribosomal protein S14;protein_id=WP_001118932.1;transl_table=11 NZ_CP075116.1 RefSeq gene 456372 456764 . + . ID=gene-CCO40_RS02115;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=CCO40_RS02115;old_locus_tag=CCO40_02115 NZ_CP075116.1 Protein Homology CDS 456372 456764 . + 0 ID=cds-WP_000062611.1;Parent=gene-CCO40_RS02115;Dbxref=GenBank:WP_000062611.1;Name=WP_000062611.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=CCO40_RS02115;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11 NZ_CP075116.1 RefSeq gene 456777 457310 . + . ID=gene-CCO40_RS02120;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=CCO40_RS02120;old_locus_tag=CCO40_02120 NZ_CP075116.1 Protein Homology CDS 456777 457310 . + 0 ID=cds-WP_000091939.1;Parent=gene-CCO40_RS02120;Dbxref=GenBank:WP_000091939.1;Name=WP_000091939.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=CCO40_RS02120;product=50S ribosomal protein L6;protein_id=WP_000091939.1;transl_table=11 NZ_CP075116.1 RefSeq gene 457320 457673 . + . ID=gene-CCO40_RS02125;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=CCO40_RS02125;old_locus_tag=CCO40_02125 NZ_CP075116.1 Protein Homology CDS 457320 457673 . + 0 ID=cds-WP_000358956.1;Parent=gene-CCO40_RS02125;Dbxref=GenBank:WP_000358956.1;Name=WP_000358956.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=CCO40_RS02125;product=50S ribosomal protein L18;protein_id=WP_000358956.1;transl_table=11 NZ_CP075116.1 RefSeq gene 457688 458191 . + . ID=gene-CCO40_RS02130;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=CCO40_RS02130;old_locus_tag=CCO40_02130 NZ_CP075116.1 Protein Homology CDS 457688 458191 . + 0 ID=cds-WP_000940121.1;Parent=gene-CCO40_RS02130;Dbxref=GenBank:WP_000940121.1;Name=WP_000940121.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=CCO40_RS02130;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11 NZ_CP075116.1 RefSeq gene 458195 458374 . + . ID=gene-CCO40_RS02135;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=CCO40_RS02135;old_locus_tag=CCO40_02135 NZ_CP075116.1 Protein Homology CDS 458195 458374 . + 0 ID=cds-WP_001140434.1;Parent=gene-CCO40_RS02135;Dbxref=GenBank:WP_001140434.1;Name=WP_001140434.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=CCO40_RS02135;product=50S ribosomal protein L30;protein_id=WP_001140434.1;transl_table=11 NZ_CP075116.1 RefSeq gene 458378 458812 . + . ID=gene-CCO40_RS02140;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=CCO40_RS02140;old_locus_tag=CCO40_02140 NZ_CP075116.1 Protein Homology CDS 458378 458812 . + 0 ID=cds-WP_001238917.1;Parent=gene-CCO40_RS02140;Dbxref=GenBank:WP_001238917.1;Name=WP_001238917.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=CCO40_RS02140;product=50S ribosomal protein L15;protein_id=WP_001238917.1;transl_table=11 NZ_CP075116.1 RefSeq gene 458820 460151 . + . ID=gene-CCO40_RS02145;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=CCO40_RS02145;old_locus_tag=CCO40_02145 NZ_CP075116.1 Protein Homology CDS 458820 460151 . + 0 ID=cds-WP_001118864.1;Parent=gene-CCO40_RS02145;Dbxref=GenBank:WP_001118864.1;Name=WP_001118864.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=CCO40_RS02145;product=preprotein translocase subunit SecY;protein_id=WP_001118864.1;transl_table=11 NZ_CP075116.1 RefSeq gene 460183 460299 . + . ID=gene-CCO40_RS02150;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=CCO40_RS02150;old_locus_tag=CCO40_02150 NZ_CP075116.1 Protein Homology CDS 460183 460299 . + 0 ID=cds-WP_000868187.1;Parent=gene-CCO40_RS02150;Dbxref=GenBank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=CCO40_RS02150;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11 NZ_CP075116.1 RefSeq gene 460446 460802 . + . ID=gene-CCO40_RS02155;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=CCO40_RS02155;old_locus_tag=CCO40_02155 NZ_CP075116.1 Protein Homology CDS 460446 460802 . + 0 ID=cds-WP_000090780.1;Parent=gene-CCO40_RS02155;Dbxref=GenBank:WP_000090780.1;Name=WP_000090780.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=CCO40_RS02155;product=30S ribosomal protein S13;protein_id=WP_000090780.1;transl_table=11 NZ_CP075116.1 RefSeq gene 460819 461208 . + . ID=gene-CCO40_RS02160;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=CCO40_RS02160;old_locus_tag=CCO40_02160 NZ_CP075116.1 Protein Homology CDS 460819 461208 . + 0 ID=cds-WP_001029758.1;Parent=gene-CCO40_RS02160;Dbxref=GenBank:WP_001029758.1;Name=WP_001029758.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=CCO40_RS02160;product=30S ribosomal protein S11;protein_id=WP_001029758.1;transl_table=11 NZ_CP075116.1 RefSeq gene 461242 461862 . + . ID=gene-CCO40_RS02165;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=CCO40_RS02165;old_locus_tag=CCO40_02165 NZ_CP075116.1 Protein Homology CDS 461242 461862 . + 0 ID=cds-WP_000135226.1;Parent=gene-CCO40_RS02165;Dbxref=GenBank:WP_000135226.1;Name=WP_000135226.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=CCO40_RS02165;product=30S ribosomal protein S4;protein_id=WP_000135226.1;transl_table=11 NZ_CP075116.1 RefSeq gene 461888 462877 . + . ID=gene-CCO40_RS02170;Name=CCO40_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02170;old_locus_tag=CCO40_02170 NZ_CP075116.1 Protein Homology CDS 461888 462877 . + 0 ID=cds-WP_001162094.1;Parent=gene-CCO40_RS02170;Dbxref=GenBank:WP_001162094.1;Name=WP_001162094.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=CCO40_RS02170;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11 NZ_CP075116.1 RefSeq gene 462918 463301 . + . ID=gene-CCO40_RS02175;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=CCO40_RS02175;old_locus_tag=CCO40_02175 NZ_CP075116.1 Protein Homology CDS 462918 463301 . + 0 ID=cds-WP_001216370.1;Parent=gene-CCO40_RS02175;Dbxref=GenBank:WP_001216370.1;Name=WP_001216370.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462318.1;locus_tag=CCO40_RS02175;product=50S ribosomal protein L17;protein_id=WP_001216370.1;transl_table=11 NZ_CP075116.1 RefSeq gene 463409 463777 . + . ID=gene-CCO40_RS02180;Name=CCO40_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02180;old_locus_tag=CCO40_02180 NZ_CP075116.1 Protein Homology CDS 463409 463777 . + 0 ID=cds-WP_000266515.1;Parent=gene-CCO40_RS02180;Dbxref=GenBank:WP_000266515.1;Name=WP_000266515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462317.1;locus_tag=CCO40_RS02180;product=DnaJ family domain-containing protein;protein_id=WP_000266515.1;transl_table=11 NZ_CP075116.1 RefSeq gene 463788 464213 . + . ID=gene-CCO40_RS02185;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=CCO40_RS02185;old_locus_tag=CCO40_02185 NZ_CP075116.1 Protein Homology CDS 463788 464213 . + 0 ID=cds-WP_000285588.1;Parent=gene-CCO40_RS02185;Dbxref=GenBank:WP_000285588.1;Name=WP_000285588.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=CCO40_RS02185;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_000285588.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 464271 464474 . + . ID=gene-CCO40_RS02190;Name=CCO40_RS02190;end_range=464474,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS02190;old_locus_tag=CCO40_02190;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 464271 464474 . + 0 ID=cds-CCO40_RS02190;Parent=gene-CCO40_RS02190;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=464474,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=CCO40_RS02190;partial=true;product=alternative ribosome-rescue factor A;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 464476 464889 . - . ID=gene-CCO40_RS02195;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=CCO40_RS02195;old_locus_tag=CCO40_02195 NZ_CP075116.1 Protein Homology CDS 464476 464889 . - 0 ID=cds-WP_000008119.1;Parent=gene-CCO40_RS02195;Dbxref=GenBank:WP_000008119.1;Name=WP_000008119.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462314.1;locus_tag=CCO40_RS02195;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000008119.1;transl_table=11 NZ_CP075116.1 RefSeq gene 465031 466407 . - . ID=gene-CCO40_RS02200;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=CCO40_RS02200;old_locus_tag=CCO40_02200 NZ_CP075116.1 Protein Homology CDS 465031 466407 . - 0 ID=cds-WP_000691374.1;Parent=gene-CCO40_RS02200;Dbxref=GenBank:WP_000691374.1;Name=WP_000691374.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=CCO40_RS02200;product=Trk system potassium transporter TrkA;protein_id=WP_000691374.1;transl_table=11 NZ_CP075116.1 RefSeq gene 466429 467718 . - . ID=gene-CCO40_RS02205;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=CCO40_RS02205;old_locus_tag=CCO40_02205 NZ_CP075116.1 Protein Homology CDS 466429 467718 . - 0 ID=cds-WP_094889362.1;Parent=gene-CCO40_RS02205;Dbxref=GenBank:WP_094889362.1;Name=WP_094889362.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462312.1;locus_tag=CCO40_RS02205;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_094889362.1;transl_table=11 NZ_CP075116.1 RefSeq gene 467770 468717 . - . ID=gene-CCO40_RS02210;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=CCO40_RS02210;old_locus_tag=CCO40_02210 NZ_CP075116.1 Protein Homology CDS 467770 468717 . - 0 ID=cds-WP_001285165.1;Parent=gene-CCO40_RS02210;Dbxref=GenBank:WP_001285165.1;Name=WP_001285165.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462311.1;locus_tag=CCO40_RS02210;product=methionyl-tRNA formyltransferase;protein_id=WP_001285165.1;transl_table=11 NZ_CP075116.1 RefSeq gene 468733 469242 . - . ID=gene-CCO40_RS02215;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=CCO40_RS02215;old_locus_tag=CCO40_02215 NZ_CP075116.1 Protein Homology CDS 468733 469242 . - 0 ID=cds-WP_000114987.1;Parent=gene-CCO40_RS02215;Dbxref=GenBank:WP_000114987.1;Name=WP_000114987.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=CCO40_RS02215;product=peptide deformylase;protein_id=WP_000114987.1;transl_table=11 NZ_CP075116.1 RefSeq gene 469374 470498 . + . ID=gene-CCO40_RS02220;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=CCO40_RS02220;old_locus_tag=CCO40_02220 NZ_CP075116.1 Protein Homology CDS 469374 470498 . + 0 ID=cds-WP_023218450.1;Parent=gene-CCO40_RS02220;Dbxref=GenBank:WP_023218450.1;Name=WP_023218450.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=CCO40_RS02220;product=DNA-protecting protein DprA;protein_id=WP_023218450.1;transl_table=11 NZ_CP075116.1 RefSeq gene 470470 470943 . + . ID=gene-CCO40_RS02225;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=CCO40_RS02225;old_locus_tag=CCO40_02225 NZ_CP075116.1 Protein Homology CDS 470470 470943 . + 0 ID=cds-WP_000460663.1;Parent=gene-CCO40_RS02225;Dbxref=GenBank:WP_000460663.1;Name=WP_000460663.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=CCO40_RS02225;product=DUF494 family protein Smg;protein_id=WP_000460663.1;transl_table=11 NZ_CP075116.1 RefSeq gene 470970 471512 . + . ID=gene-CCO40_RS02230;Name=CCO40_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02230;old_locus_tag=CCO40_02230 NZ_CP075116.1 Protein Homology CDS 470970 471512 . + 0 ID=cds-WP_001129708.1;Parent=gene-CCO40_RS02230;Dbxref=GenBank:WP_001129708.1;Name=WP_001129708.1;Ontology_term=GO:0006265,GO:0003677,GO:0003917;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462307.1;locus_tag=CCO40_RS02230;product=DNA topoisomerase family protein;protein_id=WP_001129708.1;transl_table=11 NZ_CP075116.1 RefSeq gene 471517 472089 . + . ID=gene-CCO40_RS02235;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=CCO40_RS02235;old_locus_tag=CCO40_02235 NZ_CP075116.1 Protein Homology CDS 471517 472089 . + 0 ID=cds-WP_045718269.1;Parent=gene-CCO40_RS02235;Dbxref=GenBank:WP_045718269.1;Name=WP_045718269.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462306.1;locus_tag=CCO40_RS02235;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_045718269.1;transl_table=11 NZ_CP075116.1 RefSeq gene 472094 472912 . + . ID=gene-CCO40_RS02240;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=CCO40_RS02240;old_locus_tag=CCO40_02240 NZ_CP075116.1 Protein Homology CDS 472094 472912 . + 0 ID=cds-WP_000451206.1;Parent=gene-CCO40_RS02240;Dbxref=GenBank:WP_000451206.1;Name=WP_000451206.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462305.1;locus_tag=CCO40_RS02240;product=shikimate dehydrogenase;protein_id=WP_000451206.1;transl_table=11 NZ_CP075116.1 RefSeq gene 472909 473166 . + . ID=gene-CCO40_RS02245;Name=CCO40_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02245;old_locus_tag=CCO40_02245 NZ_CP075116.1 Protein Homology CDS 472909 473166 . + 0 ID=cds-WP_001070579.1;Parent=gene-CCO40_RS02245;Dbxref=GenBank:WP_001070579.1;Name=WP_001070579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462304.1;locus_tag=CCO40_RS02245;product=DUF1488 family protein;protein_id=WP_001070579.1;transl_table=11 NZ_CP075116.1 RefSeq gene 473142 473696 . - . ID=gene-CCO40_RS02250;Name=CCO40_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02250;old_locus_tag=CCO40_02250 NZ_CP075116.1 Protein Homology CDS 473142 473696 . - 0 ID=cds-WP_001285632.1;Parent=gene-CCO40_RS02250;Dbxref=GenBank:WP_001285632.1;Name=WP_001285632.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462303.1;locus_tag=CCO40_RS02250;product=gamma carbonic anhydrase family protein;protein_id=WP_001285632.1;transl_table=11 NZ_CP075116.1 RefSeq gene 473810 473962 . + . ID=gene-CCO40_RS02255;Name=CCO40_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02255;old_locus_tag=CCO40_02255 NZ_CP075116.1 GeneMarkS-2+ CDS 473810 473962 . + 0 ID=cds-WP_000795911.1;Parent=gene-CCO40_RS02255;Dbxref=GenBank:WP_000795911.1;Name=WP_000795911.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO40_RS02255;product=hypothetical protein;protein_id=WP_000795911.1;transl_table=11 NZ_CP075116.1 RefSeq gene 474171 475712 . + . ID=gene-CCO40_RS02260;Name=CCO40_RS02260;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO40_RS02260;old_locus_tag=CCO40_02260 NZ_CP075116.1 cmsearch rRNA 474171 475712 . + . ID=rna-CCO40_RS02260;Parent=gene-CCO40_RS02260;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS02260;product=16S ribosomal RNA NZ_CP075116.1 cmsearch exon 474171 475712 . + . ID=exon-CCO40_RS02260-1;Parent=rna-CCO40_RS02260;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS02260;product=16S ribosomal RNA NZ_CP075116.1 RefSeq gene 475798 475873 . + . ID=gene-CCO40_RS02265;Name=CCO40_RS02265;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS02265;old_locus_tag=CCO40_02265 NZ_CP075116.1 tRNAscan-SE tRNA 475798 475873 . + . ID=rna-CCO40_RS02265;Parent=gene-CCO40_RS02265;anticodon=(pos:475832..475834);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS02265;product=tRNA-Glu NZ_CP075116.1 tRNAscan-SE exon 475798 475873 . + . ID=exon-CCO40_RS02265-1;Parent=rna-CCO40_RS02265;anticodon=(pos:475832..475834);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS02265;product=tRNA-Glu NZ_CP075116.1 RefSeq gene 476067 478974 . + . ID=gene-CCO40_RS02270;Name=CCO40_RS02270;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO40_RS02270;old_locus_tag=CCO40_02270 NZ_CP075116.1 cmsearch rRNA 476067 478974 . + . ID=rna-CCO40_RS02270;Parent=gene-CCO40_RS02270;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS02270;product=23S ribosomal RNA NZ_CP075116.1 cmsearch exon 476067 478974 . + . ID=exon-CCO40_RS02270-1;Parent=rna-CCO40_RS02270;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS02270;product=23S ribosomal RNA NZ_CP075116.1 RefSeq gene 479068 479183 . + . ID=gene-CCO40_RS02275;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO40_RS02275;old_locus_tag=CCO40_02275 NZ_CP075116.1 cmsearch rRNA 479068 479183 . + . ID=rna-CCO40_RS02275;Parent=gene-CCO40_RS02275;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS02275;product=5S ribosomal RNA NZ_CP075116.1 cmsearch exon 479068 479183 . + . ID=exon-CCO40_RS02275-1;Parent=rna-CCO40_RS02275;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS02275;product=5S ribosomal RNA NZ_CP075116.1 RefSeq gene 479198 479273 . + . ID=gene-CCO40_RS02280;Name=CCO40_RS02280;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS02280;old_locus_tag=CCO40_02280 NZ_CP075116.1 tRNAscan-SE tRNA 479198 479273 . + . ID=rna-CCO40_RS02280;Parent=gene-CCO40_RS02280;anticodon=(pos:479231..479233);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS02280;product=tRNA-Thr NZ_CP075116.1 tRNAscan-SE exon 479198 479273 . + . ID=exon-CCO40_RS02280-1;Parent=rna-CCO40_RS02280;anticodon=(pos:479231..479233);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS02280;product=tRNA-Thr NZ_CP075116.1 RefSeq gene 479313 479428 . + . ID=gene-CCO40_RS02285;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO40_RS02285;old_locus_tag=CCO40_02285 NZ_CP075116.1 cmsearch rRNA 479313 479428 . + . ID=rna-CCO40_RS02285;Parent=gene-CCO40_RS02285;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS02285;product=5S ribosomal RNA NZ_CP075116.1 cmsearch exon 479313 479428 . + . ID=exon-CCO40_RS02285-1;Parent=rna-CCO40_RS02285;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS02285;product=5S ribosomal RNA NZ_CP075116.1 RefSeq gene 480211 480432 . - . ID=gene-CCO40_RS02290;Name=CCO40_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02290;old_locus_tag=CCO40_02290 NZ_CP075116.1 Protein Homology CDS 480211 480432 . - 0 ID=cds-WP_000825645.1;Parent=gene-CCO40_RS02290;Dbxref=GenBank:WP_000825645.1;Name=WP_000825645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462302.1;locus_tag=CCO40_RS02290;product=putative periplasmic lipoprotein;protein_id=WP_000825645.1;transl_table=11 NZ_CP075116.1 RefSeq gene 480669 483782 . - . ID=gene-CCO40_RS02295;Name=CCO40_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02295;old_locus_tag=CCO40_02295 NZ_CP075116.1 Protein Homology CDS 480669 483782 . - 0 ID=cds-WP_001273283.1;Parent=gene-CCO40_RS02295;Dbxref=GenBank:WP_001273283.1;Name=WP_001273283.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=CCO40_RS02295;product=efflux RND transporter permease subunit;protein_id=WP_001273283.1;transl_table=11 NZ_CP075116.1 RefSeq gene 483794 484951 . - . ID=gene-CCO40_RS02300;Name=CCO40_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02300;old_locus_tag=CCO40_02300 NZ_CP075116.1 Protein Homology CDS 483794 484951 . - 0 ID=cds-WP_000160383.1;Parent=gene-CCO40_RS02300;Dbxref=GenBank:WP_000160383.1;Name=WP_000160383.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=CCO40_RS02300;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_000160383.1;transl_table=11 NZ_CP075116.1 RefSeq gene 485363 486025 . + . ID=gene-CCO40_RS02305;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=CCO40_RS02305;old_locus_tag=CCO40_02305 NZ_CP075116.1 Protein Homology CDS 485363 486025 . + 0 ID=cds-WP_001085715.1;Parent=gene-CCO40_RS02305;Dbxref=GenBank:WP_001085715.1;Name=WP_001085715.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462299.1;locus_tag=CCO40_RS02305;product=acrEF/envCD operon transcriptional regulator;protein_id=WP_001085715.1;transl_table=11 NZ_CP075116.1 RefSeq gene 486028 488127 . - . ID=gene-CCO40_RS02310;Name=CCO40_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02310;old_locus_tag=CCO40_02310 NZ_CP075116.1 Protein Homology CDS 486028 488127 . - 0 ID=cds-WP_079787865.1;Parent=gene-CCO40_RS02310;Dbxref=GenBank:WP_079787865.1;Name=WP_079787865.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=CCO40_RS02310;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_079787865.1;transl_table=11 NZ_CP075116.1 RefSeq gene 488278 488442 . - . ID=gene-CCO40_RS02315;Name=CCO40_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02315;old_locus_tag=CCO40_02315 NZ_CP075116.1 Protein Homology CDS 488278 488442 . - 0 ID=cds-WP_000620015.1;Parent=gene-CCO40_RS02315;Dbxref=GenBank:WP_000620015.1;Name=WP_000620015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=CCO40_RS02315;product=DUF2556 family protein;protein_id=WP_000620015.1;transl_table=11 NZ_CP075116.1 RefSeq gene 488525 489409 . - . ID=gene-CCO40_RS02320;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=CCO40_RS02320;old_locus_tag=CCO40_02320 NZ_CP075116.1 Protein Homology CDS 488525 489409 . - 0 ID=cds-WP_000642611.1;Parent=gene-CCO40_RS02320;Dbxref=GenBank:WP_000642611.1;Name=WP_000642611.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462296.1;locus_tag=CCO40_RS02320;product=adenine-specific DNA-methyltransferase;protein_id=WP_000642611.1;transl_table=11 NZ_CP075116.1 RefSeq gene 489495 489791 . - . ID=gene-CCO40_RS02325;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=CCO40_RS02325;old_locus_tag=CCO40_02325 NZ_CP075116.1 Protein Homology CDS 489495 489791 . - 0 ID=cds-WP_000462905.1;Parent=gene-CCO40_RS02325;Dbxref=GenBank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=CCO40_RS02325;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11 NZ_CP075116.1 RefSeq gene 489817 490782 . - . ID=gene-CCO40_RS02330;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=CCO40_RS02330;old_locus_tag=CCO40_02330 NZ_CP075116.1 Protein Homology CDS 489817 490782 . - 0 ID=cds-WP_001219664.1;Parent=gene-CCO40_RS02330;Dbxref=GenBank:WP_001219664.1;Name=WP_001219664.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=CCO40_RS02330;product=tRNA dihydrouridine synthase DusB;protein_id=WP_001219664.1;transl_table=11 NZ_CP075116.1 RefSeq gene 491049 491324 . - . ID=gene-CCO40_RS02335;Name=CCO40_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02335;old_locus_tag=CCO40_02335 NZ_CP075116.1 Protein Homology CDS 491049 491324 . - 0 ID=cds-WP_306292564.1;Parent=gene-CCO40_RS02335;Dbxref=GenBank:WP_306292564.1;Name=WP_306292564.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012420.7;locus_tag=CCO40_RS02335;product=carbonic anhydrase family protein;protein_id=WP_306292564.1;transl_table=11 NZ_CP075116.1 RefSeq gene 491444 492325 . - . ID=gene-CCO40_RS02340;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=CCO40_RS02340;old_locus_tag=CCO40_02340 NZ_CP075116.1 Protein Homology CDS 491444 492325 . - 0 ID=cds-WP_001145851.1;Parent=gene-CCO40_RS02340;Dbxref=GenBank:WP_001145851.1;Name=WP_001145851.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462293.1;locus_tag=CCO40_RS02340;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_001145851.1;transl_table=11 NZ_CP075116.1 RefSeq gene 492337 493788 . - . ID=gene-CCO40_RS02345;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=CCO40_RS02345;old_locus_tag=CCO40_02345 NZ_CP075116.1 Protein Homology CDS 492337 493788 . - 0 ID=cds-WP_001175682.1;Parent=gene-CCO40_RS02345;Dbxref=GenBank:WP_001175682.1;Name=WP_001175682.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462292.1;locus_tag=CCO40_RS02345;product=sodium/pantothenate symporter;protein_id=WP_001175682.1;transl_table=11 NZ_CP075116.1 RefSeq gene 493778 494020 . - . ID=gene-CCO40_RS02350;Name=CCO40_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02350;old_locus_tag=CCO40_02350 NZ_CP075116.1 Protein Homology CDS 493778 494020 . - 0 ID=cds-WP_000340018.1;Parent=gene-CCO40_RS02350;Dbxref=GenBank:WP_000340018.1;Name=WP_000340018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=CCO40_RS02350;product=YhdT family protein;protein_id=WP_000340018.1;transl_table=11 NZ_CP075116.1 RefSeq gene 494129 495478 . - . ID=gene-CCO40_RS02355;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=CCO40_RS02355;old_locus_tag=CCO40_02355 NZ_CP075116.1 Protein Homology CDS 494129 495478 . - 0 ID=cds-WP_000884627.1;Parent=gene-CCO40_RS02355;Dbxref=GenBank:WP_000884627.1;Name=WP_000884627.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=CCO40_RS02355;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884627.1;transl_table=11 NZ_CP075116.1 RefSeq gene 495489 495959 . - . ID=gene-CCO40_RS02360;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=CCO40_RS02360;old_locus_tag=CCO40_02360 NZ_CP075116.1 Protein Homology CDS 495489 495959 . - 0 ID=cds-WP_000354626.1;Parent=gene-CCO40_RS02360;Dbxref=GenBank:WP_000354626.1;Name=WP_000354626.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=CCO40_RS02360;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354626.1;transl_table=11 NZ_CP075116.1 RefSeq gene 496352 496951 . - . ID=gene-CCO40_RS02365;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;gene_synonym=yedZ;locus_tag=CCO40_RS02365;old_locus_tag=CCO40_02365 NZ_CP075116.1 Protein Homology CDS 496352 496951 . - 0 ID=cds-WP_001240053.1;Parent=gene-CCO40_RS02365;Dbxref=GenBank:WP_001240053.1;Name=WP_001240053.1;Ontology_term=GO:0009055,GO:0010181,GO:0020037;gbkey=CDS;gene=msrQ;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462288.1;locus_tag=CCO40_RS02365;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_001240053.1;transl_table=11 NZ_CP075116.1 RefSeq gene 496952 497956 . - . ID=gene-CCO40_RS02370;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;gene_synonym=yedY;locus_tag=CCO40_RS02370;old_locus_tag=CCO40_02370 NZ_CP075116.1 Protein Homology CDS 496952 497956 . - 0 ID=cds-WP_000723876.1;Parent=gene-CCO40_RS02370;Dbxref=GenBank:WP_000723876.1;Name=WP_000723876.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462287.1;locus_tag=CCO40_RS02370;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_000723876.1;transl_table=11 NZ_CP075116.1 RefSeq gene 498079 499053 . - . ID=gene-CCO40_RS02375;Name=acuI;gbkey=Gene;gene=acuI;gene_biotype=protein_coding;locus_tag=CCO40_RS02375;old_locus_tag=CCO40_02375 NZ_CP075116.1 Protein Homology CDS 498079 499053 . - 0 ID=cds-WP_001148241.1;Parent=gene-CCO40_RS02375;Dbxref=GenBank:WP_001148241.1;Name=WP_001148241.1;gbkey=CDS;gene=acuI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462286.1;locus_tag=CCO40_RS02375;product=acrylyl-CoA reductase (NADPH);protein_id=WP_001148241.1;transl_table=11 NZ_CP075116.1 RefSeq gene 499257 501197 . + . ID=gene-CCO40_RS02380;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=CCO40_RS02380;old_locus_tag=CCO40_02380 NZ_CP075116.1 Protein Homology CDS 499257 501197 . + 0 ID=cds-WP_001241381.1;Parent=gene-CCO40_RS02380;Dbxref=GenBank:WP_001241381.1;Name=WP_001241381.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462285.1;locus_tag=CCO40_RS02380;product=RNase E specificity factor CsrD;protein_id=WP_001241381.1;transl_table=11 NZ_CP075116.1 RefSeq gene 501505 502548 . + . ID=gene-CCO40_RS02385;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=CCO40_RS02385;old_locus_tag=CCO40_02385 NZ_CP075116.1 Protein Homology CDS 501505 502548 . + 0 ID=cds-WP_000913396.1;Parent=gene-CCO40_RS02385;Dbxref=GenBank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=CCO40_RS02385;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11 NZ_CP075116.1 RefSeq gene 502613 503665 . + . ID=gene-CCO40_RS02390;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=CCO40_RS02390;old_locus_tag=CCO40_02390 NZ_CP075116.1 Protein Homology CDS 502613 503665 . + 0 ID=cds-WP_000802538.1;Parent=gene-CCO40_RS02390;Dbxref=GenBank:WP_000802538.1;Name=WP_000802538.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=CCO40_RS02390;product=rod shape-determining protein MreC;protein_id=WP_000802538.1;transl_table=11 NZ_CP075116.1 RefSeq gene 503668 504156 . + . ID=gene-CCO40_RS02395;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=CCO40_RS02395;old_locus_tag=CCO40_02395 NZ_CP075116.1 Protein Homology CDS 503668 504156 . + 0 ID=cds-WP_000179403.1;Parent=gene-CCO40_RS02395;Dbxref=GenBank:WP_000179403.1;Name=WP_000179403.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=CCO40_RS02395;product=rod shape-determining protein MreD;protein_id=WP_000179403.1;transl_table=11 NZ_CP075116.1 RefSeq gene 504165 504758 . + . ID=gene-CCO40_RS02400;Name=CCO40_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02400;old_locus_tag=CCO40_02400 NZ_CP075116.1 Protein Homology CDS 504165 504758 . + 0 ID=cds-WP_000210303.1;Parent=gene-CCO40_RS02400;Dbxref=GenBank:WP_000210303.1;Name=WP_000210303.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462281.1;locus_tag=CCO40_RS02400;product=Maf family protein;protein_id=WP_000210303.1;transl_table=11 NZ_CP075116.1 RefSeq gene 504748 506217 . + . ID=gene-CCO40_RS02405;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=CCO40_RS02405;old_locus_tag=CCO40_02405 NZ_CP075116.1 Protein Homology CDS 504748 506217 . + 0 ID=cds-WP_000123188.1;Parent=gene-CCO40_RS02405;Dbxref=GenBank:WP_000123188.1;Name=WP_000123188.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=CCO40_RS02405;product=ribonuclease G;protein_id=WP_000123188.1;transl_table=11 NZ_CP075116.1 RefSeq gene 506328 510128 . + . ID=gene-CCO40_RS02410;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=CCO40_RS02410;old_locus_tag=CCO40_02410 NZ_CP075116.1 Protein Homology CDS 506328 510128 . + 0 ID=cds-WP_001253502.1;Parent=gene-CCO40_RS02410;Dbxref=GenBank:WP_001253502.1;Name=WP_001253502.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=CCO40_RS02410;product=AsmA2 domain-containing protein YhdP;protein_id=WP_001253502.1;transl_table=11 NZ_CP075116.1 RefSeq gene 510273 511718 . + . ID=gene-CCO40_RS02415;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=CCO40_RS02415;old_locus_tag=CCO40_02415 NZ_CP075116.1 Protein Homology CDS 510273 511718 . + 0 ID=cds-WP_000055932.1;Parent=gene-CCO40_RS02415;Dbxref=GenBank:WP_000055932.1;Name=WP_000055932.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=CCO40_RS02415;product=metalloprotease TldD;protein_id=WP_000055932.1;transl_table=11 NZ_CP075116.1 RefSeq gene 511841 512770 . - . ID=gene-CCO40_RS02420;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=CCO40_RS02420;old_locus_tag=CCO40_02420 NZ_CP075116.1 Protein Homology CDS 511841 512770 . - 0 ID=cds-WP_000440300.1;Parent=gene-CCO40_RS02420;Dbxref=GenBank:WP_000440300.1;Name=WP_000440300.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462277.1;locus_tag=CCO40_RS02420;product=HTH-type transcriptional activator AaeR;protein_id=WP_000440300.1;transl_table=11 NZ_CP075116.1 RefSeq gene 512952 513155 . + . ID=gene-CCO40_RS02425;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=CCO40_RS02425;old_locus_tag=CCO40_02425 NZ_CP075116.1 Protein Homology CDS 512952 513155 . + 0 ID=cds-WP_000051840.1;Parent=gene-CCO40_RS02425;Dbxref=GenBank:WP_000051840.1;Name=WP_000051840.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=CCO40_RS02425;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_000051840.1;transl_table=11 NZ_CP075116.1 RefSeq gene 513163 514095 . + . ID=gene-CCO40_RS02430;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=CCO40_RS02430;old_locus_tag=CCO40_02430 NZ_CP075116.1 Protein Homology CDS 513163 514095 . + 0 ID=cds-WP_000855134.1;Parent=gene-CCO40_RS02430;Dbxref=GenBank:WP_000855134.1;Name=WP_000855134.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462275.1;locus_tag=CCO40_RS02430;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000855134.1;transl_table=11 NZ_CP075116.1 RefSeq gene 514101 516068 . + . ID=gene-CCO40_RS02435;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=CCO40_RS02435;old_locus_tag=CCO40_02435 NZ_CP075116.1 Protein Homology CDS 514101 516068 . + 0 ID=cds-WP_000510913.1;Parent=gene-CCO40_RS02435;Dbxref=GenBank:WP_000510913.1;Name=WP_000510913.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=CCO40_RS02435;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_000510913.1;transl_table=11 NZ_CP075116.1 RefSeq gene 516240 516512 . + . ID=gene-CCO40_RS02440;Name=CCO40_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02440;old_locus_tag=CCO40_02440 NZ_CP075116.1 Protein Homology CDS 516240 516512 . + 0 ID=cds-WP_001103887.1;Parent=gene-CCO40_RS02440;Dbxref=GenBank:WP_001103887.1;Name=WP_001103887.1;Ontology_term=GO:0046983;gbkey=CDS;go_function=protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462273.1;locus_tag=CCO40_RS02440;product=barstar family protein;protein_id=WP_001103887.1;transl_table=11 NZ_CP075116.1 RefSeq gene 516572 516838 . - . ID=gene-CCO40_RS02445;Name=yhcN-B;gbkey=Gene;gene=yhcN-B;gene_biotype=protein_coding;locus_tag=CCO40_RS02445;old_locus_tag=CCO40_02445 NZ_CP075116.1 Protein Homology CDS 516572 516838 . - 0 ID=cds-WP_000853277.1;Parent=gene-CCO40_RS02445;Dbxref=GenBank:WP_000853277.1;Name=WP_000853277.1;gbkey=CDS;gene=yhcN-B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=CCO40_RS02445;product=DUF1471 family stress response protein YhcN-B;protein_id=WP_000853277.1;transl_table=11 NZ_CP075116.1 RefSeq gene 516942 517205 . - . ID=gene-CCO40_RS02450;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=CCO40_RS02450;old_locus_tag=CCO40_02450 NZ_CP075116.1 Protein Homology CDS 516942 517205 . - 0 ID=cds-WP_000694212.1;Parent=gene-CCO40_RS02450;Dbxref=GenBank:WP_000694212.1;Name=WP_000694212.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=CCO40_RS02450;product=peroxide/acid stress response protein YhcN;protein_id=WP_000694212.1;transl_table=11 NZ_CP075116.1 RefSeq gene 517570 518040 . - . ID=gene-CCO40_RS02455;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=CCO40_RS02455;old_locus_tag=CCO40_02455 NZ_CP075116.1 Protein Homology CDS 517570 518040 . - 0 ID=cds-WP_001257852.1;Parent=gene-CCO40_RS02455;Dbxref=GenBank:WP_001257852.1;Name=WP_001257852.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=CCO40_RS02455;product=transcriptional regulator ArgR;protein_id=WP_001257852.1;transl_table=11 NZ_CP075116.1 RefSeq gene 518454 519392 . + . ID=gene-CCO40_RS02460;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=CCO40_RS02460;old_locus_tag=CCO40_02460 NZ_CP075116.1 Protein Homology CDS 518454 519392 . + 0 ID=cds-WP_000861586.1;Parent=gene-CCO40_RS02460;Dbxref=GenBank:WP_000861586.1;Name=WP_000861586.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=CCO40_RS02460;product=malate dehydrogenase;protein_id=WP_000861586.1;transl_table=11 NZ_CP075116.1 RefSeq gene 519512 520141 . + . ID=gene-CCO40_RS02465;Name=CCO40_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02465;old_locus_tag=CCO40_02465 NZ_CP075116.1 Protein Homology CDS 519512 520141 . + 0 ID=cds-WP_000723776.1;Parent=gene-CCO40_RS02465;Dbxref=GenBank:WP_000723776.1;Name=WP_000723776.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=CCO40_RS02465;product=GntR family transcriptional regulator;protein_id=WP_000723776.1;transl_table=11 NZ_CP075116.1 RefSeq gene 520128 520793 . + . ID=gene-CCO40_RS02470;Name=CCO40_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02470;old_locus_tag=CCO40_02470 NZ_CP075116.1 Protein Homology CDS 520128 520793 . + 0 ID=cds-WP_001171581.1;Parent=gene-CCO40_RS02470;Dbxref=GenBank:WP_001171581.1;Name=WP_001171581.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=CCO40_RS02470;product=GntR family transcriptional regulator;protein_id=WP_001171581.1;transl_table=11 NZ_CP075116.1 RefSeq gene 521004 522272 . + . ID=gene-CCO40_RS02475;Name=CCO40_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02475;old_locus_tag=CCO40_02475 NZ_CP075116.1 Protein Homology CDS 521004 522272 . + 0 ID=cds-WP_000433390.1;Parent=gene-CCO40_RS02475;Dbxref=GenBank:WP_000433390.1;Name=WP_000433390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=CCO40_RS02475;product=SLC13 family permease;protein_id=WP_000433390.1;transl_table=11 NZ_CP075116.1 RefSeq gene 522305 523204 . + . ID=gene-CCO40_RS02480;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=CCO40_RS02480;old_locus_tag=CCO40_02480 NZ_CP075116.1 Protein Homology CDS 522305 523204 . + 0 ID=cds-WP_000045349.1;Parent=gene-CCO40_RS02480;Dbxref=GenBank:WP_000045349.1;Name=WP_000045349.1;Ontology_term=GO:0008730;gbkey=CDS;gene=ttdA;go_function=L(+)-tartrate dehydratase activity|0008730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462265.1;locus_tag=CCO40_RS02480;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000045349.1;transl_table=11 NZ_CP075116.1 RefSeq gene 523204 523821 . + . ID=gene-CCO40_RS02485;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=CCO40_RS02485;old_locus_tag=CCO40_02485 NZ_CP075116.1 Protein Homology CDS 523204 523821 . + 0 ID=cds-WP_000162405.1;Parent=gene-CCO40_RS02485;Dbxref=GenBank:WP_000162405.1;Name=WP_000162405.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462264.1;locus_tag=CCO40_RS02485;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000162405.1;transl_table=11 NZ_CP075116.1 RefSeq gene 523978 524220 . + . ID=gene-CCO40_RS02490;Name=CCO40_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02490;old_locus_tag=CCO40_02490 NZ_CP075116.1 Protein Homology CDS 523978 524220 . + 0 ID=cds-WP_000180122.1;Parent=gene-CCO40_RS02490;Dbxref=GenBank:WP_000180122.1;Name=WP_000180122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000128597.1;locus_tag=CCO40_RS02490;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_000180122.1;transl_table=11 NZ_CP075116.1 RefSeq gene 524237 526021 . + . ID=gene-CCO40_RS02495;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=CCO40_RS02495;old_locus_tag=CCO40_02495 NZ_CP075116.1 Protein Homology CDS 524237 526021 . + 0 ID=cds-WP_094889061.1;Parent=gene-CCO40_RS02495;Dbxref=GenBank:WP_094889061.1;Name=WP_094889061.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=CCO40_RS02495;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_094889061.1;transl_table=11 NZ_CP075116.1 RefSeq gene 526034 527335 . + . ID=gene-CCO40_RS02500;Name=CCO40_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02500;old_locus_tag=CCO40_02500 NZ_CP075116.1 Protein Homology CDS 526034 527335 . + 0 ID=cds-WP_000444891.1;Parent=gene-CCO40_RS02500;Dbxref=GenBank:WP_000444891.1;Name=WP_000444891.1;Ontology_term=GO:0006814,GO:0015451,GO:0016829;gbkey=CDS;go_function=decarboxylation-driven active transmembrane transporter activity|0015451||IEA,lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=CCO40_RS02500;product=oxalacetate decarboxylase subunit beta;protein_id=WP_000444891.1;transl_table=11 NZ_CP075116.1 RefSeq gene 527355 528086 . + . ID=gene-CCO40_RS02505;Name=CCO40_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02505;old_locus_tag=CCO40_02505 NZ_CP075116.1 Protein Homology CDS 527355 528086 . + 0 ID=cds-WP_000602030.1;Parent=gene-CCO40_RS02505;Dbxref=GenBank:WP_000602030.1;Name=WP_000602030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462260.1;locus_tag=CCO40_RS02505;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_000602030.1;transl_table=11 NZ_CP075116.1 RefSeq gene 528120 529190 . - . ID=gene-CCO40_RS02510;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=CCO40_RS02510;old_locus_tag=CCO40_02510 NZ_CP075116.1 Protein Homology CDS 528120 529190 . - 0 ID=cds-WP_000497705.1;Parent=gene-CCO40_RS02510;Dbxref=GenBank:WP_000497705.1;Name=WP_000497705.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462259.1;locus_tag=CCO40_RS02510;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_000497705.1;transl_table=11 NZ_CP075116.1 RefSeq gene 529283 530650 . - . ID=gene-CCO40_RS02515;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=CCO40_RS02515;old_locus_tag=CCO40_02515 NZ_CP075116.1 Protein Homology CDS 529283 530650 . - 0 ID=cds-WP_000716688.1;Parent=gene-CCO40_RS02515;Dbxref=GenBank:WP_000716688.1;Name=WP_000716688.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462258.1;locus_tag=CCO40_RS02515;product=serine endoprotease DegQ;protein_id=WP_000716688.1;transl_table=11 NZ_CP075116.1 RefSeq gene 530807 531205 . - . ID=gene-CCO40_RS02520;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=CCO40_RS02520;old_locus_tag=CCO40_02520 NZ_CP075116.1 Protein Homology CDS 530807 531205 . - 0 ID=cds-WP_001519074.1;Parent=gene-CCO40_RS02520;Dbxref=GenBank:WP_001519074.1;Name=WP_001519074.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=CCO40_RS02520;product=Z-ring associated protein ZapG;protein_id=WP_001519074.1;transl_table=11 NZ_CP075116.1 RefSeq gene 531398 532522 . + . ID=gene-CCO40_RS02525;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=CCO40_RS02525;old_locus_tag=CCO40_02525 NZ_CP075116.1 Protein Homology CDS 531398 532522 . + 0 ID=cds-WP_001191230.1;Parent=gene-CCO40_RS02525;Dbxref=GenBank:WP_001191230.1;Name=WP_001191230.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462256.1;locus_tag=CCO40_RS02525;product=cell division protein ZapE;protein_id=WP_001191230.1;transl_table=11 NZ_CP075116.1 RefSeq gene 532824 533252 . + . ID=gene-CCO40_RS02530;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=CCO40_RS02530;old_locus_tag=CCO40_02530 NZ_CP075116.1 Protein Homology CDS 532824 533252 . + 0 ID=cds-WP_000847559.1;Parent=gene-CCO40_RS02530;Dbxref=GenBank:WP_000847559.1;Name=WP_000847559.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=CCO40_RS02530;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11 NZ_CP075116.1 RefSeq gene 533268 533660 . + . ID=gene-CCO40_RS02535;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=CCO40_RS02535;old_locus_tag=CCO40_02535 NZ_CP075116.1 Protein Homology CDS 533268 533660 . + 0 ID=cds-WP_000829815.1;Parent=gene-CCO40_RS02535;Dbxref=GenBank:WP_000829815.1;Name=WP_000829815.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=CCO40_RS02535;product=30S ribosomal protein S9;protein_id=WP_000829815.1;transl_table=11 NZ_CP075116.1 RefSeq gene 533687 533860 . - . ID=gene-CCO40_RS02540;Name=CCO40_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02540;old_locus_tag=CCO40_02540 NZ_CP075116.1 GeneMarkS-2+ CDS 533687 533860 . - 0 ID=cds-WP_001518027.1;Parent=gene-CCO40_RS02540;Dbxref=GenBank:WP_001518027.1;Name=WP_001518027.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO40_RS02540;product=hypothetical protein;protein_id=WP_001518027.1;transl_table=11 NZ_CP075116.1 RefSeq gene 533975 534613 . + . ID=gene-CCO40_RS02545;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=CCO40_RS02545;old_locus_tag=CCO40_02545 NZ_CP075116.1 Protein Homology CDS 533975 534613 . + 0 ID=cds-WP_000257298.1;Parent=gene-CCO40_RS02545;Dbxref=GenBank:WP_000257298.1;Name=WP_000257298.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=CCO40_RS02545;product=stringent starvation protein SspA;protein_id=WP_000257298.1;transl_table=11 NZ_CP075116.1 RefSeq gene 534619 535119 . + . ID=gene-CCO40_RS02550;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=CCO40_RS02550;old_locus_tag=CCO40_02550 NZ_CP075116.1 Protein Homology CDS 534619 535119 . + 0 ID=cds-WP_000366112.1;Parent=gene-CCO40_RS02550;Dbxref=GenBank:WP_000366112.1;Name=WP_000366112.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462251.1;locus_tag=CCO40_RS02550;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366112.1;transl_table=11 NZ_CP075116.1 RefSeq gene 535228 536019 . + . ID=gene-CCO40_RS02555;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=CCO40_RS02555;old_locus_tag=CCO40_02555 NZ_CP075116.1 Protein Homology CDS 535228 536019 . + 0 ID=cds-WP_000382926.1;Parent=gene-CCO40_RS02555;Dbxref=GenBank:WP_000382926.1;Name=WP_000382926.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462250.1;locus_tag=CCO40_RS02555;product=transcriptional regulator NanR;protein_id=WP_000382926.1;transl_table=11 NZ_CP075116.1 RefSeq gene 536154 537047 . + . ID=gene-CCO40_RS02560;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=CCO40_RS02560;old_locus_tag=CCO40_02560 NZ_CP075116.1 Protein Homology CDS 536154 537047 . + 0 ID=cds-WP_001029665.1;Parent=gene-CCO40_RS02560;Dbxref=GenBank:WP_001029665.1;Name=WP_001029665.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462249.1;locus_tag=CCO40_RS02560;product=N-acetylneuraminate lyase;protein_id=WP_001029665.1;transl_table=11 NZ_CP075116.1 RefSeq gene 537163 538653 . + . ID=gene-CCO40_RS02565;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=CCO40_RS02565;old_locus_tag=CCO40_02565 NZ_CP075116.1 Protein Homology CDS 537163 538653 . + 0 ID=cds-WP_000108074.1;Parent=gene-CCO40_RS02565;Dbxref=GenBank:WP_000108074.1;Name=WP_000108074.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462248.1;locus_tag=CCO40_RS02565;product=sialic acid transporter NanT;protein_id=WP_000108074.1;transl_table=11 NZ_CP075116.1 RefSeq gene 538700 539389 . + . ID=gene-CCO40_RS02570;Name=CCO40_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02570;old_locus_tag=CCO40_02570 NZ_CP075116.1 Protein Homology CDS 538700 539389 . + 0 ID=cds-WP_000054441.1;Parent=gene-CCO40_RS02570;Dbxref=GenBank:WP_000054441.1;Name=WP_000054441.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=CCO40_RS02570;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054441.1;transl_table=11 NZ_CP075116.1 RefSeq gene 539386 540261 . + . ID=gene-CCO40_RS02575;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=CCO40_RS02575;old_locus_tag=CCO40_02575 NZ_CP075116.1 Protein Homology CDS 539386 540261 . + 0 ID=cds-WP_000208971.1;Parent=gene-CCO40_RS02575;Dbxref=GenBank:WP_000208971.1;Name=WP_000208971.1;Ontology_term=GO:0019262,GO:0005524,GO:0009384;gbkey=CDS;gene=nanK;go_function=ATP binding|0005524||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462246.1;locus_tag=CCO40_RS02575;product=N-acetylmannosamine kinase;protein_id=WP_000208971.1;transl_table=11 NZ_CP075116.1 RefSeq gene 540258 540725 . + . ID=gene-CCO40_RS02580;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=CCO40_RS02580;old_locus_tag=CCO40_02580 NZ_CP075116.1 Protein Homology CDS 540258 540725 . + 0 ID=cds-WP_000979903.1;Parent=gene-CCO40_RS02580;Dbxref=GenBank:WP_000979903.1;Name=WP_000979903.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462245.1;locus_tag=CCO40_RS02580;product=N-acetylneuraminate anomerase;protein_id=WP_000979903.1;transl_table=11 NZ_CP075116.1 RefSeq gene 540808 542088 . - . ID=gene-CCO40_RS02585;Name=CCO40_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02585;old_locus_tag=CCO40_02585 NZ_CP075116.1 Protein Homology CDS 540808 542088 . - 0 ID=cds-WP_001180691.1;Parent=gene-CCO40_RS02585;Dbxref=GenBank:WP_001180691.1;Name=WP_001180691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462244.1;locus_tag=CCO40_RS02585;product=cytosine deaminase;protein_id=WP_001180691.1;transl_table=11 NZ_CP075116.1 RefSeq gene 542075 543328 . - . ID=gene-CCO40_RS02590;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=CCO40_RS02590;old_locus_tag=CCO40_02590 NZ_CP075116.1 Protein Homology CDS 542075 543328 . - 0 ID=cds-WP_000076263.1;Parent=gene-CCO40_RS02590;Dbxref=GenBank:WP_000076263.1;Name=WP_000076263.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=CCO40_RS02590;product=cytosine permease;protein_id=WP_000076263.1;transl_table=11 NZ_CP075116.1 RefSeq gene 543444 544547 . - . ID=gene-CCO40_RS02595;Name=CCO40_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02595;old_locus_tag=CCO40_02595 NZ_CP075116.1 Protein Homology CDS 543444 544547 . - 0 ID=cds-WP_000184314.1;Parent=gene-CCO40_RS02595;Dbxref=GenBank:WP_000184314.1;Name=WP_000184314.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462242.1;locus_tag=CCO40_RS02595;product=PDDEXK nuclease domain-containing protein;protein_id=WP_000184314.1;transl_table=11 NZ_CP075116.1 RefSeq gene 544754 546172 . - . ID=gene-CCO40_RS02600;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=CCO40_RS02600;old_locus_tag=CCO40_02600 NZ_CP075116.1 Protein Homology CDS 544754 546172 . - 0 ID=cds-WP_000081628.1;Parent=gene-CCO40_RS02600;Dbxref=GenBank:WP_000081628.1;Name=WP_000081628.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=CCO40_RS02600;product=glutamate synthase subunit GltD;protein_id=WP_000081628.1;transl_table=11 NZ_CP075116.1 RefSeq gene 546182 550642 . - . ID=gene-CCO40_RS02605;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=CCO40_RS02605;old_locus_tag=CCO40_02605 NZ_CP075116.1 Protein Homology CDS 546182 550642 . - 0 ID=cds-WP_000965023.1;Parent=gene-CCO40_RS02605;Dbxref=GenBank:WP_000965023.1;Name=WP_000965023.1;Ontology_term=GO:0008152,GO:0097054,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=metabolic process|0008152||IEA,L-glutamate biosynthetic process|0097054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=CCO40_RS02605;product=glutamate synthase large subunit;protein_id=WP_000965023.1;transl_table=11 NZ_CP075116.1 RefSeq gene 551314 552243 . + . ID=gene-CCO40_RS02610;Name=mnmL;gbkey=Gene;gene=mnmL;gene_biotype=protein_coding;gene_synonym=ytqA;locus_tag=CCO40_RS02610;old_locus_tag=CCO40_02610 NZ_CP075116.1 Protein Homology CDS 551314 552243 . + 0 ID=cds-WP_001176887.1;Parent=gene-CCO40_RS02610;Dbxref=GenBank:WP_001176887.1;Name=WP_001176887.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0006400,GO:0051536,GO:1904047;gbkey=CDS;gene=mnmL;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462239.1;locus_tag=CCO40_RS02610;product=tRNA modification radical SAM protein MnmL/YtqA;protein_id=WP_001176887.1;transl_table=11 NZ_CP075116.1 RefSeq gene 552337 554673 . + . ID=gene-CCO40_RS02615;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=CCO40_RS02615;old_locus_tag=CCO40_02615 NZ_CP075116.1 Protein Homology CDS 552337 554673 . + 0 ID=cds-WP_000809813.1;Parent=gene-CCO40_RS02615;Dbxref=GenBank:WP_000809813.1;Name=WP_000809813.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462238.1;locus_tag=CCO40_RS02615;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_000809813.1;transl_table=11 NZ_CP075116.1 RefSeq gene 554900 555553 . + . ID=gene-CCO40_RS02620;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=CCO40_RS02620;old_locus_tag=CCO40_02620 NZ_CP075116.1 Protein Homology CDS 554900 555553 . + 0 ID=cds-WP_000719811.1;Parent=gene-CCO40_RS02620;Dbxref=GenBank:WP_000719811.1;Name=WP_000719811.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462237.1;locus_tag=CCO40_RS02620;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_000719811.1;transl_table=11 NZ_CP075116.1 RefSeq gene 555550 556278 . + . ID=gene-CCO40_RS02625;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=CCO40_RS02625;old_locus_tag=CCO40_02625 NZ_CP075116.1 Protein Homology CDS 555550 556278 . + 0 ID=cds-WP_000044647.1;Parent=gene-CCO40_RS02625;Dbxref=GenBank:WP_000044647.1;Name=WP_000044647.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462236.1;locus_tag=CCO40_RS02625;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_000044647.1;transl_table=11 NZ_CP075116.1 RefSeq gene 556353 556985 . - . ID=gene-CCO40_RS02630;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=CCO40_RS02630;old_locus_tag=CCO40_02630 NZ_CP075116.1 Protein Homology CDS 556353 556985 . - 0 ID=cds-WP_000602200.1;Parent=gene-CCO40_RS02630;Dbxref=GenBank:WP_000602200.1;Name=WP_000602200.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462235.1;locus_tag=CCO40_RS02630;product=PhoP regulatory network protein YrbL;protein_id=WP_000602200.1;transl_table=11 NZ_CP075116.1 RefSeq gene 557234 557506 . - . ID=gene-CCO40_RS02635;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=CCO40_RS02635;old_locus_tag=CCO40_02635 NZ_CP075116.1 Protein Homology CDS 557234 557506 . - 0 ID=cds-WP_000216797.1;Parent=gene-CCO40_RS02635;Dbxref=GenBank:WP_000216797.1;Name=WP_000216797.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=CCO40_RS02635;product=PTS phosphocarrier protein NPr;protein_id=WP_000216797.1;transl_table=11 NZ_CP075116.1 RefSeq gene 557503 558357 . - . ID=gene-CCO40_RS02640;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=CCO40_RS02640;old_locus_tag=CCO40_02640 NZ_CP075116.1 Protein Homology CDS 557503 558357 . - 0 ID=cds-WP_000243749.1;Parent=gene-CCO40_RS02640;Dbxref=GenBank:WP_000243749.1;Name=WP_000243749.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462233.1;locus_tag=CCO40_RS02640;product=RNase adapter RapZ;protein_id=WP_000243749.1;transl_table=11 NZ_CP075116.1 RefSeq gene 558403 558894 . - . ID=gene-CCO40_RS02645;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=CCO40_RS02645;old_locus_tag=CCO40_02645 NZ_CP075116.1 Protein Homology CDS 558403 558894 . - 0 ID=cds-WP_000609332.1;Parent=gene-CCO40_RS02645;Dbxref=GenBank:WP_000609332.1;Name=WP_000609332.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462232.1;locus_tag=CCO40_RS02645;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000609332.1;transl_table=11 NZ_CP075116.1 RefSeq gene 559012 559299 . - . ID=gene-CCO40_RS02650;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=CCO40_RS02650;old_locus_tag=CCO40_02650 NZ_CP075116.1 Protein Homology CDS 559012 559299 . - 0 ID=cds-WP_001176589.1;Parent=gene-CCO40_RS02650;Dbxref=GenBank:WP_001176589.1;Name=WP_001176589.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=CCO40_RS02650;product=ribosome hibernation promoting factor;protein_id=WP_001176589.1;transl_table=11 NZ_CP075116.1 RefSeq gene 559322 560755 . - . ID=gene-CCO40_RS02655;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=CCO40_RS02655;old_locus_tag=CCO40_02655 NZ_CP075116.1 Protein Homology CDS 559322 560755 . - 0 ID=cds-WP_000809018.1;Parent=gene-CCO40_RS02655;Dbxref=GenBank:WP_000809018.1;Name=WP_000809018.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=CCO40_RS02655;product=RNA polymerase factor sigma-54;protein_id=WP_000809018.1;transl_table=11 NZ_CP075116.1 RefSeq gene 560803 561528 . - . ID=gene-CCO40_RS02660;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=CCO40_RS02660;old_locus_tag=CCO40_02660 NZ_CP075116.1 Protein Homology CDS 560803 561528 . - 0 ID=cds-WP_000224104.1;Parent=gene-CCO40_RS02660;Dbxref=GenBank:WP_000224104.1;Name=WP_000224104.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=CCO40_RS02660;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224104.1;transl_table=11 NZ_CP075116.1 RefSeq gene 561535 562089 . - . ID=gene-CCO40_RS02665;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=CCO40_RS02665;old_locus_tag=CCO40_02665 NZ_CP075116.1 Protein Homology CDS 561535 562089 . - 0 ID=cds-WP_000669770.1;Parent=gene-CCO40_RS02665;Dbxref=GenBank:WP_000669770.1;Name=WP_000669770.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=CCO40_RS02665;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669770.1;transl_table=11 NZ_CP075116.1 RefSeq gene 562058 562633 . - . ID=gene-CCO40_RS02670;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=CCO40_RS02670;old_locus_tag=CCO40_02670 NZ_CP075116.1 Protein Homology CDS 562058 562633 . - 0 ID=cds-WP_000047845.1;Parent=gene-CCO40_RS02670;Dbxref=GenBank:WP_000047845.1;Name=WP_000047845.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462227.1;locus_tag=CCO40_RS02670;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000047845.1;transl_table=11 NZ_CP075116.1 RefSeq gene 562630 563196 . - . ID=gene-CCO40_RS02675;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=CCO40_RS02675;old_locus_tag=CCO40_02675 NZ_CP075116.1 Protein Homology CDS 562630 563196 . - 0 ID=cds-WP_000030029.1;Parent=gene-CCO40_RS02675;Dbxref=GenBank:WP_000030029.1;Name=WP_000030029.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462226.1;locus_tag=CCO40_RS02675;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030029.1;transl_table=11 NZ_CP075116.1 RefSeq gene 563217 564203 . - . ID=gene-CCO40_RS02680;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=CCO40_RS02680;old_locus_tag=CCO40_02680 NZ_CP075116.1 Protein Homology CDS 563217 564203 . - 0 ID=cds-WP_000018617.1;Parent=gene-CCO40_RS02680;Dbxref=GenBank:WP_000018617.1;Name=WP_000018617.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=CCO40_RS02680;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_000018617.1;transl_table=11 NZ_CP075116.1 RefSeq gene 564217 565194 . - . ID=gene-CCO40_RS02685;Name=CCO40_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02685;old_locus_tag=CCO40_02685 NZ_CP075116.1 Protein Homology CDS 564217 565194 . - 0 ID=cds-WP_000922736.1;Parent=gene-CCO40_RS02685;Dbxref=GenBank:WP_000922736.1;Name=WP_000922736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462224.1;locus_tag=CCO40_RS02685;product=calcium/sodium antiporter;protein_id=WP_000922736.1;transl_table=11 NZ_CP075116.1 RefSeq gene 565407 566219 . + . ID=gene-CCO40_RS02690;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=CCO40_RS02690;old_locus_tag=CCO40_02690 NZ_CP075116.1 Protein Homology CDS 565407 566219 . + 0 ID=cds-WP_000531566.1;Parent=gene-CCO40_RS02690;Dbxref=GenBank:WP_000531566.1;Name=WP_000531566.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462223.1;locus_tag=CCO40_RS02690;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000531566.1;transl_table=11 NZ_CP075116.1 RefSeq gene 566227 567009 . + . ID=gene-CCO40_RS02695;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=CCO40_RS02695;old_locus_tag=CCO40_02695 NZ_CP075116.1 Protein Homology CDS 566227 567009 . + 0 ID=cds-WP_000925786.1;Parent=gene-CCO40_RS02695;Dbxref=GenBank:WP_000925786.1;Name=WP_000925786.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=CCO40_RS02695;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925786.1;transl_table=11 NZ_CP075116.1 RefSeq gene 567014 567565 . + . ID=gene-CCO40_RS02700;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=CCO40_RS02700;old_locus_tag=CCO40_02700 NZ_CP075116.1 Protein Homology CDS 567014 567565 . + 0 ID=cds-WP_001193591.1;Parent=gene-CCO40_RS02700;Dbxref=GenBank:WP_001193591.1;Name=WP_001193591.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462221.1;locus_tag=CCO40_RS02700;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001193591.1;transl_table=11 NZ_CP075116.1 RefSeq gene 567584 568219 . + . ID=gene-CCO40_RS02705;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=CCO40_RS02705;old_locus_tag=CCO40_02705 NZ_CP075116.1 Protein Homology CDS 567584 568219 . + 0 ID=cds-WP_000476475.1;Parent=gene-CCO40_RS02705;Dbxref=GenBank:WP_000476475.1;Name=WP_000476475.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462220.1;locus_tag=CCO40_RS02705;product=phospholipid-binding protein MlaC;protein_id=WP_000476475.1;transl_table=11 NZ_CP075116.1 RefSeq gene 568219 568515 . + . ID=gene-CCO40_RS02710;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=CCO40_RS02710;old_locus_tag=CCO40_02710 NZ_CP075116.1 Protein Homology CDS 568219 568515 . + 0 ID=cds-WP_000188843.1;Parent=gene-CCO40_RS02710;Dbxref=GenBank:WP_000188843.1;Name=WP_000188843.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462219.1;locus_tag=CCO40_RS02710;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000188843.1;transl_table=11 NZ_CP075116.1 RefSeq gene 568703 568957 . + . ID=gene-CCO40_RS02715;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=CCO40_RS02715;old_locus_tag=CCO40_02715 NZ_CP075116.1 Protein Homology CDS 568703 568957 . + 0 ID=cds-WP_001518349.1;Parent=gene-CCO40_RS02715;Dbxref=GenBank:WP_001518349.1;Name=WP_001518349.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=CCO40_RS02715;product=BolA family iron metabolism protein IbaG;protein_id=WP_001518349.1;transl_table=11 NZ_CP075116.1 RefSeq gene 569011 570270 . + . ID=gene-CCO40_RS02720;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=CCO40_RS02720;old_locus_tag=CCO40_02720 NZ_CP075116.1 Protein Homology CDS 569011 570270 . + 0 ID=cds-WP_000357288.1;Parent=gene-CCO40_RS02720;Dbxref=GenBank:WP_000357288.1;Name=WP_000357288.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462217.1;locus_tag=CCO40_RS02720;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357288.1;transl_table=11 NZ_CP075116.1 RefSeq gene 570329 570616 . - . ID=gene-CCO40_RS02725;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=CCO40_RS02725;old_locus_tag=CCO40_02725 NZ_CP075116.1 Protein Homology CDS 570329 570616 . - 0 ID=cds-WP_000444167.1;Parent=gene-CCO40_RS02725;Dbxref=GenBank:WP_000444167.1;Name=WP_000444167.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462216.1;locus_tag=CCO40_RS02725;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000444167.1;transl_table=11 NZ_CP075116.1 RefSeq gene 570848 571819 . - . ID=gene-CCO40_RS02730;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=CCO40_RS02730;old_locus_tag=CCO40_02730 NZ_CP075116.1 Protein Homology CDS 570848 571819 . - 0 ID=cds-WP_001047354.1;Parent=gene-CCO40_RS02730;Dbxref=GenBank:WP_001047354.1;Name=WP_001047354.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462215.1;locus_tag=CCO40_RS02730;product=octaprenyl diphosphate synthase;protein_id=WP_001047354.1;transl_table=11 NZ_CP075116.1 RefSeq gene 572077 572388 . + . ID=gene-CCO40_RS02735;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=CCO40_RS02735;old_locus_tag=CCO40_02735 NZ_CP075116.1 Protein Homology CDS 572077 572388 . + 0 ID=cds-WP_000271396.1;Parent=gene-CCO40_RS02735;Dbxref=GenBank:WP_000271396.1;Name=WP_000271396.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=CCO40_RS02735;product=50S ribosomal protein L21;protein_id=WP_000271396.1;transl_table=11 NZ_CP075116.1 RefSeq gene 572408 572665 . + . ID=gene-CCO40_RS02740;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=CCO40_RS02740;old_locus_tag=CCO40_02740 NZ_CP075116.1 Protein Homology CDS 572408 572665 . + 0 ID=cds-WP_000940593.1;Parent=gene-CCO40_RS02740;Dbxref=GenBank:WP_000940593.1;Name=WP_000940593.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=CCO40_RS02740;product=50S ribosomal protein L27;protein_id=WP_000940593.1;transl_table=11 NZ_CP075116.1 RefSeq gene 572795 573760 . + . ID=gene-CCO40_RS02745;Name=CCO40_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02745;old_locus_tag=CCO40_02745 NZ_CP075116.1 Protein Homology CDS 572795 573760 . + 0 ID=cds-WP_000813052.1;Parent=gene-CCO40_RS02745;Dbxref=GenBank:WP_000813052.1;Name=WP_000813052.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=CCO40_RS02745;product=DMT family transporter;protein_id=WP_000813052.1;transl_table=11 NZ_CP075116.1 RefSeq gene 573776 574948 . + . ID=gene-CCO40_RS02750;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=CCO40_RS02750;old_locus_tag=CCO40_02750 NZ_CP075116.1 Protein Homology CDS 573776 574948 . + 0 ID=cds-WP_000673556.1;Parent=gene-CCO40_RS02750;Dbxref=GenBank:WP_000673556.1;Name=WP_000673556.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462212.1;locus_tag=CCO40_RS02750;product=Obg family GTPase CgtA;protein_id=WP_000673556.1;transl_table=11 NZ_CP075116.1 RefSeq gene 575079 576512 . - . ID=gene-CCO40_RS02755;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=CCO40_RS02755;old_locus_tag=CCO40_02755 NZ_CP075116.1 Protein Homology CDS 575079 576512 . - 0 ID=cds-WP_001212675.1;Parent=gene-CCO40_RS02755;Dbxref=GenBank:WP_001212675.1;Name=WP_001212675.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462211.1;locus_tag=CCO40_RS02755;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_001212675.1;transl_table=11 NZ_CP075116.1 RefSeq gene 576760 577236 . + . ID=gene-CCO40_RS02760;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=CCO40_RS02760;old_locus_tag=CCO40_02760 NZ_CP075116.1 Protein Homology CDS 576760 577236 . + 0 ID=cds-WP_001148008.1;Parent=gene-CCO40_RS02760;Dbxref=GenBank:WP_001148008.1;Name=WP_001148008.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=CCO40_RS02760;product=transcription elongation factor GreA;protein_id=WP_001148008.1;transl_table=11 NZ_CP075116.1 RefSeq gene 577392 577685 . - . ID=gene-CCO40_RS02765;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=CCO40_RS02765;old_locus_tag=CCO40_02765 NZ_CP075116.1 Protein Homology CDS 577392 577685 . - 0 ID=cds-WP_001592995.1;Parent=gene-CCO40_RS02765;Dbxref=GenBank:WP_001592995.1;Name=WP_001592995.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=CCO40_RS02765;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001592995.1;transl_table=11 NZ_CP075116.1 RefSeq gene 577812 578438 . + . ID=gene-CCO40_RS02770;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=CCO40_RS02770;old_locus_tag=CCO40_02770 NZ_CP075116.1 Protein Homology CDS 577812 578438 . + 0 ID=cds-WP_000145974.1;Parent=gene-CCO40_RS02770;Dbxref=GenBank:WP_000145974.1;Name=WP_000145974.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462208.1;locus_tag=CCO40_RS02770;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_000145974.1;transl_table=11 NZ_CP075116.1 RefSeq gene 578542 580476 . + . ID=gene-CCO40_RS02775;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=CCO40_RS02775;old_locus_tag=CCO40_02775 NZ_CP075116.1 Protein Homology CDS 578542 580476 . + 0 ID=cds-WP_001107481.1;Parent=gene-CCO40_RS02775;Dbxref=GenBank:WP_001107481.1;Name=WP_001107481.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=CCO40_RS02775;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107481.1;transl_table=11 NZ_CP075116.1 RefSeq gene 580581 581429 . + . ID=gene-CCO40_RS02780;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=CCO40_RS02780;old_locus_tag=CCO40_02780 NZ_CP075116.1 Protein Homology CDS 580581 581429 . + 0 ID=cds-WP_000764711.1;Parent=gene-CCO40_RS02780;Dbxref=GenBank:WP_000764711.1;Name=WP_000764711.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462206.1;locus_tag=CCO40_RS02780;product=dihydropteroate synthase;protein_id=WP_000764711.1;transl_table=11 NZ_CP075116.1 RefSeq gene 581422 582759 . + . ID=gene-CCO40_RS02785;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=CCO40_RS02785;old_locus_tag=CCO40_02785 NZ_CP075116.1 Protein Homology CDS 581422 582759 . + 0 ID=cds-WP_094889062.1;Parent=gene-CCO40_RS02785;Dbxref=GenBank:WP_094889062.1;Name=WP_094889062.1;Ontology_term=GO:0005975,GO:0009252,GO:0000287,GO:0008966;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA;go_process=carbohydrate metabolic process|0005975||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462205.1;locus_tag=CCO40_RS02785;product=phosphoglucosamine mutase;protein_id=WP_094889062.1;transl_table=11 NZ_CP075116.1 RefSeq gene 582982 583314 . + . ID=gene-CCO40_RS02790;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=CCO40_RS02790;old_locus_tag=CCO40_02790 NZ_CP075116.1 Protein Homology CDS 582982 583314 . + 0 ID=cds-WP_000272680.1;Parent=gene-CCO40_RS02790;Dbxref=GenBank:WP_000272680.1;Name=WP_000272680.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=CCO40_RS02790;product=preprotein translocase subunit SecG;protein_id=WP_000272680.1;transl_table=11 NZ_CP075116.1 RefSeq gene 583328 583414 . + . ID=gene-CCO40_RS02795;Name=CCO40_RS02795;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS02795;old_locus_tag=CCO40_02795 NZ_CP075116.1 tRNAscan-SE tRNA 583328 583414 . + . ID=rna-CCO40_RS02795;Parent=gene-CCO40_RS02795;anticodon=(pos:583362..583364);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS02795;product=tRNA-Leu NZ_CP075116.1 tRNAscan-SE exon 583328 583414 . + . ID=exon-CCO40_RS02795-1;Parent=rna-CCO40_RS02795;anticodon=(pos:583362..583364);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS02795;product=tRNA-Leu NZ_CP075116.1 RefSeq gene 583750 584814 . + . ID=gene-CCO40_RS02800;Name=CCO40_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02800;old_locus_tag=CCO40_02800 NZ_CP075116.1 Protein Homology CDS 583750 584814 . + 0 ID=cds-WP_000051504.1;Parent=gene-CCO40_RS02800;Dbxref=GenBank:WP_000051504.1;Name=WP_000051504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462203.1;locus_tag=CCO40_RS02800;product=DUF1963 domain-containing protein;protein_id=WP_000051504.1;transl_table=11 NZ_CP075116.1 RefSeq gene 584900 586243 . - . ID=gene-CCO40_RS02805;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=CCO40_RS02805;old_locus_tag=CCO40_02805 NZ_CP075116.1 Protein Homology CDS 584900 586243 . - 0 ID=cds-WP_000207660.1;Parent=gene-CCO40_RS02805;Dbxref=GenBank:WP_000207660.1;Name=WP_000207660.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=CCO40_RS02805;product=argininosuccinate synthase;protein_id=WP_000207660.1;transl_table=11 NZ_CP075116.1 RefSeq gene 586587 586663 . + . ID=gene-CCO40_RS02810;Name=CCO40_RS02810;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS02810;old_locus_tag=CCO40_02810 NZ_CP075116.1 tRNAscan-SE tRNA 586587 586663 . + . ID=rna-CCO40_RS02810;Parent=gene-CCO40_RS02810;anticodon=(pos:586621..586623);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS02810;product=tRNA-Met NZ_CP075116.1 tRNAscan-SE exon 586587 586663 . + . ID=exon-CCO40_RS02810-1;Parent=rna-CCO40_RS02810;anticodon=(pos:586621..586623);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS02810;product=tRNA-Met NZ_CP075116.1 RefSeq gene 586871 587323 . + . ID=gene-CCO40_RS02815;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=CCO40_RS02815;old_locus_tag=CCO40_02815 NZ_CP075116.1 Protein Homology CDS 586871 587323 . + 0 ID=cds-WP_000105461.1;Parent=gene-CCO40_RS02815;Dbxref=GenBank:WP_000105461.1;Name=WP_000105461.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=CCO40_RS02815;product=ribosome maturation factor RimP;protein_id=WP_000105461.1;transl_table=11 NZ_CP075116.1 RefSeq gene 587351 588853 . + . ID=gene-CCO40_RS02820;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=CCO40_RS02820;old_locus_tag=CCO40_02820 NZ_CP075116.1 Protein Homology CDS 587351 588853 . + 0 ID=cds-WP_001031038.1;Parent=gene-CCO40_RS02820;Dbxref=GenBank:WP_001031038.1;Name=WP_001031038.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=CCO40_RS02820;product=transcription termination factor NusA;protein_id=WP_001031038.1;transl_table=11 NZ_CP075116.1 RefSeq gene 588878 591556 . + . ID=gene-CCO40_RS02825;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=CCO40_RS02825;old_locus_tag=CCO40_02825 NZ_CP075116.1 Protein Homology CDS 588878 591556 . + 0 ID=cds-WP_000133064.1;Parent=gene-CCO40_RS02825;Dbxref=GenBank:WP_000133064.1;Name=WP_000133064.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=CCO40_RS02825;product=translation initiation factor IF-2;protein_id=WP_000133064.1;transl_table=11 NZ_CP075116.1 RefSeq gene 591777 592178 . + . ID=gene-CCO40_RS02830;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=CCO40_RS02830;old_locus_tag=CCO40_02830 NZ_CP075116.1 Protein Homology CDS 591777 592178 . + 0 ID=cds-WP_001040200.1;Parent=gene-CCO40_RS02830;Dbxref=GenBank:WP_001040200.1;Name=WP_001040200.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=CCO40_RS02830;product=30S ribosome-binding factor RbfA;protein_id=WP_001040200.1;transl_table=11 NZ_CP075116.1 RefSeq gene 592178 593122 . + . ID=gene-CCO40_RS02835;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=CCO40_RS02835;old_locus_tag=CCO40_02835 NZ_CP075116.1 Protein Homology CDS 592178 593122 . + 0 ID=cds-WP_000089668.1;Parent=gene-CCO40_RS02835;Dbxref=GenBank:WP_000089668.1;Name=WP_000089668.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462197.1;locus_tag=CCO40_RS02835;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_000089668.1;transl_table=11 NZ_CP075116.1 RefSeq gene 593273 593542 . + . ID=gene-CCO40_RS02840;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=CCO40_RS02840;old_locus_tag=CCO40_02840 NZ_CP075116.1 Protein Homology CDS 593273 593542 . + 0 ID=cds-WP_000059465.1;Parent=gene-CCO40_RS02840;Dbxref=GenBank:WP_000059465.1;Name=WP_000059465.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=CCO40_RS02840;product=30S ribosomal protein S15;protein_id=WP_000059465.1;transl_table=11 NZ_CP075116.1 RefSeq gene 593784 595919 . + . ID=gene-CCO40_RS02845;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=CCO40_RS02845;old_locus_tag=CCO40_02845 NZ_CP075116.1 Protein Homology CDS 593784 595919 . + 0 ID=cds-WP_001670767.1;Parent=gene-CCO40_RS02845;Dbxref=GenBank:WP_001670767.1;Name=WP_001670767.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=CCO40_RS02845;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001670767.1;transl_table=11 NZ_CP075116.1 RefSeq gene 596029 596913 . + . ID=gene-CCO40_RS02850;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=CCO40_RS02850;old_locus_tag=CCO40_02850 NZ_CP075116.1 Protein Homology CDS 596029 596913 . + 0 ID=cds-WP_000802069.1;Parent=gene-CCO40_RS02850;Dbxref=GenBank:WP_000802069.1;Name=WP_000802069.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=CCO40_RS02850;product=lipoprotein NlpI;protein_id=WP_000802069.1;transl_table=11 NZ_CP075116.1 RefSeq gene 597019 597099 . + . ID=gene-CCO40_RS02855;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=CCO40_RS02855;old_locus_tag=CCO40_02855 NZ_CP075116.1 Protein Homology CDS 597019 597099 . + 0 ID=cds-WP_010723222.1;Parent=gene-CCO40_RS02855;Dbxref=GenBank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=CCO40_RS02855;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11 NZ_CP075116.1 RefSeq gene 597092 598981 . + . ID=gene-CCO40_RS02860;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=CCO40_RS02860;old_locus_tag=CCO40_02860 NZ_CP075116.1 Protein Homology CDS 597092 598981 . + 0 ID=cds-WP_000807248.1;Parent=gene-CCO40_RS02860;Dbxref=GenBank:WP_000807248.1;Name=WP_000807248.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312070.2;locus_tag=CCO40_RS02860;product=ATP-dependent RNA helicase DeaD;protein_id=WP_000807248.1;transl_table=11 NZ_CP075116.1 RefSeq gene 599135 600379 . + . ID=gene-CCO40_RS02865;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=CCO40_RS02865;old_locus_tag=CCO40_02865 NZ_CP075116.1 Protein Homology CDS 599135 600379 . + 0 ID=cds-WP_000224393.1;Parent=gene-CCO40_RS02865;Dbxref=GenBank:WP_000224393.1;Name=WP_000224393.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462192.1;locus_tag=CCO40_RS02865;product=tryptophan permease;protein_id=WP_000224393.1;transl_table=11 NZ_CP075116.1 RefSeq gene 600470 601477 . - . ID=gene-CCO40_RS02870;Name=CCO40_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02870;old_locus_tag=CCO40_02870 NZ_CP075116.1 Protein Homology CDS 600470 601477 . - 0 ID=cds-WP_000130422.1;Parent=gene-CCO40_RS02870;Dbxref=GenBank:WP_000130422.1;Name=WP_000130422.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462189.1;locus_tag=CCO40_RS02870;product=luciferase-like monooxygenase;protein_id=WP_000130422.1;transl_table=11 NZ_CP075116.1 RefSeq gene 601655 602533 . - . ID=gene-CCO40_RS02875;Name=CCO40_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02875;old_locus_tag=CCO40_02875 NZ_CP075116.1 Protein Homology CDS 601655 602533 . - 0 ID=cds-WP_000877715.1;Parent=gene-CCO40_RS02875;Dbxref=GenBank:WP_000877715.1;Name=WP_000877715.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312067.2;locus_tag=CCO40_RS02875;product=U32 family peptidase;protein_id=WP_000877715.1;transl_table=11 NZ_CP075116.1 RefSeq gene 602542 603537 . - . ID=gene-CCO40_RS02880;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=CCO40_RS02880;old_locus_tag=CCO40_02880 NZ_CP075116.1 Protein Homology CDS 602542 603537 . - 0 ID=cds-WP_000421309.1;Parent=gene-CCO40_RS02880;Dbxref=GenBank:WP_000421309.1;Name=WP_000421309.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=CCO40_RS02880;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_000421309.1;transl_table=11 NZ_CP075116.1 RefSeq gene 603754 604278 . + . ID=gene-CCO40_RS02885;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=CCO40_RS02885;old_locus_tag=CCO40_02885 NZ_CP075116.1 Protein Homology CDS 603754 604278 . + 0 ID=cds-WP_000884721.1;Parent=gene-CCO40_RS02885;Dbxref=GenBank:WP_000884721.1;Name=WP_000884721.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462186.1;locus_tag=CCO40_RS02885;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_000884721.1;transl_table=11 NZ_CP075116.1 RefSeq gene 604272 604775 . + . ID=gene-CCO40_RS02890;Name=CCO40_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02890;old_locus_tag=CCO40_02890 NZ_CP075116.1 Protein Homology CDS 604272 604775 . + 0 ID=cds-WP_000908562.1;Parent=gene-CCO40_RS02890;Dbxref=GenBank:WP_000908562.1;Name=WP_000908562.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462185.1;locus_tag=CCO40_RS02890;product=GNAT family N-acetyltransferase;protein_id=WP_000908562.1;transl_table=11 NZ_CP075116.1 RefSeq gene 604762 605079 . - . ID=gene-CCO40_RS02895;Name=CCO40_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02895;old_locus_tag=CCO40_02895 NZ_CP075116.1 Protein Homology CDS 604762 605079 . - 0 ID=cds-WP_000928379.1;Parent=gene-CCO40_RS02895;Dbxref=GenBank:WP_000928379.1;Name=WP_000928379.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462184.3;locus_tag=CCO40_RS02895;product=GIY-YIG nuclease family protein;protein_id=WP_000928379.1;transl_table=11 NZ_CP075116.1 RefSeq gene 605117 605560 . + . ID=gene-CCO40_RS02900;Name=CCO40_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02900;old_locus_tag=CCO40_02900 NZ_CP075116.1 Protein Homology CDS 605117 605560 . + 0 ID=cds-WP_000380404.1;Parent=gene-CCO40_RS02900;Dbxref=GenBank:WP_000380404.1;Name=WP_000380404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462183.1;locus_tag=CCO40_RS02900;product=YhbP family protein;protein_id=WP_000380404.1;transl_table=11 NZ_CP075116.1 RefSeq gene 605540 606058 . - . ID=gene-CCO40_RS02905;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=CCO40_RS02905;old_locus_tag=CCO40_02905 NZ_CP075116.1 Protein Homology CDS 605540 606058 . - 0 ID=cds-WP_000037599.1;Parent=gene-CCO40_RS02905;Dbxref=GenBank:WP_000037599.1;Name=WP_000037599.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462182.1;locus_tag=CCO40_RS02905;product=protein/nucleic acid deglycase;protein_id=WP_000037599.1;transl_table=11 NZ_CP075116.1 RefSeq gene 606189 606824 . + . ID=gene-CCO40_RS02910;Name=CCO40_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02910;old_locus_tag=CCO40_02910 NZ_CP075116.1 Protein Homology CDS 606189 606824 . + 0 ID=cds-WP_001530791.1;Parent=gene-CCO40_RS02910;Dbxref=GenBank:WP_001530791.1;Name=WP_001530791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312060.2;locus_tag=CCO40_RS02910;product=NAD(P)H-binding protein;protein_id=WP_001530791.1;transl_table=11 NZ_CP075116.1 RefSeq gene 606891 607466 . - . ID=gene-CCO40_RS02915;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=CCO40_RS02915;old_locus_tag=CCO40_02915 NZ_CP075116.1 Protein Homology CDS 606891 607466 . - 0 ID=cds-WP_094889063.1;Parent=gene-CCO40_RS02915;Dbxref=GenBank:WP_094889063.1;Name=WP_094889063.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462180.1;locus_tag=CCO40_RS02915;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_094889063.1;transl_table=11 NZ_CP075116.1 RefSeq gene 607476 608066 . - . ID=gene-CCO40_RS02920;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=CCO40_RS02920;old_locus_tag=CCO40_02920 NZ_CP075116.1 Protein Homology CDS 607476 608066 . - 0 ID=cds-WP_000893481.1;Parent=gene-CCO40_RS02920;Dbxref=GenBank:WP_000893481.1;Name=WP_000893481.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462179.1;locus_tag=CCO40_RS02920;product=DnaA initiator-associating protein DiaA;protein_id=WP_000893481.1;transl_table=11 NZ_CP075116.1 RefSeq gene 608088 608483 . - . ID=gene-CCO40_RS02925;Name=CCO40_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02925;old_locus_tag=CCO40_02925 NZ_CP075116.1 Protein Homology CDS 608088 608483 . - 0 ID=cds-WP_000057285.1;Parent=gene-CCO40_RS02925;Dbxref=GenBank:WP_000057285.1;Name=WP_000057285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462178.1;locus_tag=CCO40_RS02925;product=YraN family protein;protein_id=WP_000057285.1;transl_table=11 NZ_CP075116.1 RefSeq gene 608441 610483 . - . ID=gene-CCO40_RS02930;Name=CCO40_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02930;old_locus_tag=CCO40_02930 NZ_CP075116.1 Protein Homology CDS 608441 610483 . - 0 ID=cds-WP_094889064.1;Parent=gene-CCO40_RS02930;Dbxref=GenBank:WP_094889064.1;Name=WP_094889064.1;Ontology_term=GO:0008360,GO:0009252,GO:0004553,GO:0019899,GO:0030234;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,enzyme binding|0019899||IEA,enzyme regulator activity|0030234||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=CCO40_RS02930;product=penicillin-binding protein activator;protein_id=WP_094889064.1;transl_table=11 NZ_CP075116.1 RefSeq gene 610547 611410 . + . ID=gene-CCO40_RS02935;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=CCO40_RS02935;old_locus_tag=CCO40_02935 NZ_CP075116.1 Protein Homology CDS 610547 611410 . + 0 ID=cds-WP_000812288.1;Parent=gene-CCO40_RS02935;Dbxref=GenBank:WP_000812288.1;Name=WP_000812288.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=CCO40_RS02935;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_000812288.1;transl_table=11 NZ_CP075116.1 RefSeq gene 611568 612341 . - . ID=gene-CCO40_RS02940;Name=CCO40_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02940;old_locus_tag=CCO40_02940 NZ_CP075116.1 Protein Homology CDS 611568 612341 . - 0 ID=cds-WP_001083899.1;Parent=gene-CCO40_RS02940;Dbxref=GenBank:WP_001083899.1;Name=WP_001083899.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462175.1;locus_tag=CCO40_RS02940;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001083899.1;transl_table=11 NZ_CP075116.1 RefSeq gene 612452 613495 . - . ID=gene-CCO40_RS02945;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=CCO40_RS02945;old_locus_tag=CCO40_02945 NZ_CP075116.1 Protein Homology CDS 612452 613495 . - 0 ID=cds-WP_000844174.1;Parent=gene-CCO40_RS02945;Dbxref=GenBank:WP_000844174.1;Name=WP_000844174.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=CCO40_RS02945;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_000844174.1;transl_table=11 NZ_CP075116.1 RefSeq gene 613539 614912 . - . ID=gene-CCO40_RS02950;Name=CCO40_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02950;old_locus_tag=CCO40_02950 NZ_CP075116.1 Protein Homology CDS 613539 614912 . - 0 ID=cds-WP_000490601.1;Parent=gene-CCO40_RS02950;Dbxref=GenBank:WP_000490601.1;Name=WP_000490601.1;Ontology_term=GO:0009401,GO:0015796,GO:0015577,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=galactitol transmembrane transporter activity|0015577||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,galactitol transmembrane transport|0015796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=CCO40_RS02950;product=galactitol-specific PTS transporter subunit IIC;protein_id=WP_000490601.1;transl_table=11 NZ_CP075116.1 RefSeq gene 614916 615200 . - . ID=gene-CCO40_RS02955;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=CCO40_RS02955;old_locus_tag=CCO40_02955 NZ_CP075116.1 Protein Homology CDS 614916 615200 . - 0 ID=cds-WP_000824293.1;Parent=gene-CCO40_RS02955;Dbxref=GenBank:WP_000824293.1;Name=WP_000824293.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462172.1;locus_tag=CCO40_RS02955;product=PTS galactitol transporter subunit IIB;protein_id=WP_000824293.1;transl_table=11 NZ_CP075116.1 RefSeq gene 615231 615695 . - . ID=gene-CCO40_RS02960;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=CCO40_RS02960;old_locus_tag=CCO40_02960 NZ_CP075116.1 Protein Homology CDS 615231 615695 . - 0 ID=cds-WP_000080445.1;Parent=gene-CCO40_RS02960;Dbxref=GenBank:WP_000080445.1;Name=WP_000080445.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462171.1;locus_tag=CCO40_RS02960;product=PTS galactitol transporter subunit IIA;protein_id=WP_000080445.1;transl_table=11 NZ_CP075116.1 RefSeq gene 615710 616981 . - . ID=gene-CCO40_RS02965;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=CCO40_RS02965;old_locus_tag=CCO40_02965 NZ_CP075116.1 Protein Homology CDS 615710 616981 . - 0 ID=cds-WP_000658627.1;Parent=gene-CCO40_RS02965;Dbxref=GenBank:WP_000658627.1;Name=WP_000658627.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=CCO40_RS02965;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WP_000658627.1;transl_table=11 NZ_CP075116.1 RefSeq gene 617179 617985 . - . ID=gene-CCO40_RS02970;Name=CCO40_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02970;old_locus_tag=CCO40_02970 NZ_CP075116.1 Protein Homology CDS 617179 617985 . - 0 ID=cds-WP_001175238.1;Parent=gene-CCO40_RS02970;Dbxref=GenBank:WP_001175238.1;Name=WP_001175238.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462169.1;locus_tag=CCO40_RS02970;product=HPr family phosphocarrier protein;protein_id=WP_001175238.1;transl_table=11 NZ_CP075116.1 RefSeq gene 617972 619399 . - . ID=gene-CCO40_RS02975;Name=CCO40_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02975;old_locus_tag=CCO40_02975 NZ_CP075116.1 Protein Homology CDS 617972 619399 . - 0 ID=cds-WP_094889065.1;Parent=gene-CCO40_RS02975;Dbxref=GenBank:WP_094889065.1;Name=WP_094889065.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462168.1;locus_tag=CCO40_RS02975;product=PTS fructose transporter subunit IIC;protein_id=WP_094889065.1;transl_table=11 NZ_CP075116.1 RefSeq gene 619426 620340 . - . ID=gene-CCO40_RS02980;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=CCO40_RS02980;old_locus_tag=CCO40_02980 NZ_CP075116.1 Protein Homology CDS 619426 620340 . - 0 ID=cds-WP_080230145.1;Parent=gene-CCO40_RS02980;Dbxref=GenBank:WP_080230145.1;Name=WP_080230145.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462167.1;locus_tag=CCO40_RS02980;product=1-phosphofructokinase;protein_id=WP_080230145.1;transl_table=11 NZ_CP075116.1 RefSeq gene 620351 621205 . - . ID=gene-CCO40_RS02985;Name=CCO40_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02985;old_locus_tag=CCO40_02985 NZ_CP075116.1 Protein Homology CDS 620351 621205 . - 0 ID=cds-WP_000469985.1;Parent=gene-CCO40_RS02985;Dbxref=GenBank:WP_000469985.1;Name=WP_000469985.1;Ontology_term=GO:0005975,GO:0008270,GO:0009025;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462166.1;locus_tag=CCO40_RS02985;product=tagatose bisphosphate family class II aldolase;protein_id=WP_000469985.1;transl_table=11 NZ_CP075116.1 RefSeq gene 621539 622372 . + . ID=gene-CCO40_RS02990;Name=CCO40_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02990;old_locus_tag=CCO40_02990 NZ_CP075116.1 Protein Homology CDS 621539 622372 . + 0 ID=cds-WP_001118368.1;Parent=gene-CCO40_RS02990;Dbxref=GenBank:WP_001118368.1;Name=WP_001118368.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462165.1;locus_tag=CCO40_RS02990;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001118368.1;transl_table=11 NZ_CP075116.1 RefSeq gene 622383 623330 . + . ID=gene-CCO40_RS02995;Name=CCO40_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS02995;old_locus_tag=CCO40_02995 NZ_CP075116.1 Protein Homology CDS 622383 623330 . + 0 ID=cds-WP_001027807.1;Parent=gene-CCO40_RS02995;Dbxref=GenBank:WP_001027807.1;Name=WP_001027807.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462164.1;locus_tag=CCO40_RS02995;product=sugar kinase;protein_id=WP_001027807.1;transl_table=11 NZ_CP075116.1 RefSeq gene 623570 625141 . - . ID=gene-CCO40_RS03000;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=CCO40_RS03000;old_locus_tag=CCO40_03000 NZ_CP075116.1 Protein Homology CDS 623570 625141 . - 0 ID=cds-WP_001273723.1;Parent=gene-CCO40_RS03000;Dbxref=GenBank:WP_001273723.1;Name=WP_001273723.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=D-galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462163.1;locus_tag=CCO40_RS03000;product=galactarate dehydratase;protein_id=WP_001273723.1;transl_table=11 NZ_CP075116.1 RefSeq gene 625671 626441 . + . ID=gene-CCO40_RS03005;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=CCO40_RS03005;old_locus_tag=CCO40_03005 NZ_CP075116.1 Protein Homology CDS 625671 626441 . + 0 ID=cds-WP_001057715.1;Parent=gene-CCO40_RS03005;Dbxref=GenBank:WP_001057715.1;Name=WP_001057715.1;Ontology_term=GO:0042838,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=D-glucarate catabolic process|0042838||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462162.1;locus_tag=CCO40_RS03005;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_001057715.1;transl_table=11 NZ_CP075116.1 RefSeq gene 626467 627357 . + . ID=gene-CCO40_RS03010;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=CCO40_RS03010;old_locus_tag=CCO40_03010 NZ_CP075116.1 Protein Homology CDS 626467 627357 . + 0 ID=cds-WP_000178106.1;Parent=gene-CCO40_RS03010;Dbxref=GenBank:WP_000178106.1;Name=WP_000178106.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=CCO40_RS03010;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000178106.1;transl_table=11 NZ_CP075116.1 RefSeq gene 627455 628600 . + . ID=gene-CCO40_RS03015;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=CCO40_RS03015;old_locus_tag=CCO40_03015 NZ_CP075116.1 Protein Homology CDS 627455 628600 . + 0 ID=cds-WP_000706458.1;Parent=gene-CCO40_RS03015;Dbxref=GenBank:WP_000706458.1;Name=WP_000706458.1;Ontology_term=GO:0008152,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462160.1;locus_tag=CCO40_RS03015;product=glycerate 2-kinase;protein_id=WP_000706458.1;transl_table=11 NZ_CP075116.1 RefSeq gene 628633 629007 . + . ID=gene-CCO40_RS03020;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=CCO40_RS03020;old_locus_tag=CCO40_03020 NZ_CP075116.1 cmsearch RNase_P_RNA 628633 629007 . + . ID=rna-CCO40_RS03020;Parent=gene-CCO40_RS03020;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00010,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS03020;product=RNase P RNA component class A NZ_CP075116.1 cmsearch exon 628633 629007 . + . ID=exon-CCO40_RS03020-1;Parent=rna-CCO40_RS03020;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00010,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS03020;product=RNase P RNA component class A NZ_CP075116.1 RefSeq gene 630383 631321 . + . ID=gene-CCO40_RS03025;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=CCO40_RS03025;old_locus_tag=CCO40_03025 NZ_CP075116.1 Protein Homology CDS 630383 631321 . + 0 ID=cds-WP_001094907.1;Parent=gene-CCO40_RS03025;Dbxref=GenBank:WP_001094907.1;Name=WP_001094907.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462159.1;locus_tag=CCO40_RS03025;product=transcriptional regulator TdcA;protein_id=WP_001094907.1;transl_table=11 NZ_CP075116.1 RefSeq gene 631419 632408 . + . ID=gene-CCO40_RS03030;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=CCO40_RS03030;old_locus_tag=CCO40_03030 NZ_CP075116.1 Protein Homology CDS 631419 632408 . + 0 ID=cds-WP_000548370.1;Parent=gene-CCO40_RS03030;Dbxref=GenBank:WP_000548370.1;Name=WP_000548370.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462158.1;locus_tag=CCO40_RS03030;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_000548370.1;transl_table=11 NZ_CP075116.1 RefSeq gene 632429 633760 . + . ID=gene-CCO40_RS03035;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=CCO40_RS03035;old_locus_tag=CCO40_03035 NZ_CP075116.1 Protein Homology CDS 632429 633760 . + 0 ID=cds-WP_000108129.1;Parent=gene-CCO40_RS03035;Dbxref=GenBank:WP_000108129.1;Name=WP_000108129.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=CCO40_RS03035;product=threonine/serine transporter TdcC;protein_id=WP_000108129.1;transl_table=11 NZ_CP075116.1 RefSeq gene 633827 635035 . + . ID=gene-CCO40_RS03040;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=CCO40_RS03040;old_locus_tag=CCO40_03040 NZ_CP075116.1 Protein Homology CDS 633827 635035 . + 0 ID=cds-WP_001001855.1;Parent=gene-CCO40_RS03040;Dbxref=GenBank:WP_001001855.1;Name=WP_001001855.1;Ontology_term=GO:0008152,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=metabolic process|0008152||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462156.1;locus_tag=CCO40_RS03040;product=propionate kinase;protein_id=WP_001001855.1;transl_table=11 NZ_CP075116.1 RefSeq gene 635069 637363 . + . ID=gene-CCO40_RS03045;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=CCO40_RS03045;old_locus_tag=CCO40_03045 NZ_CP075116.1 Protein Homology CDS 635069 637363 . + 0 ID=cds-WP_000867321.1;Parent=gene-CCO40_RS03045;Dbxref=GenBank:WP_000867321.1;Name=WP_000867321.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462155.1;locus_tag=CCO40_RS03045;product=formate C-acetyltransferase;protein_id=WP_000867321.1;transl_table=11 NZ_CP075116.1 RefSeq gene 637433 638797 . + . ID=gene-CCO40_RS03050;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=CCO40_RS03050;old_locus_tag=CCO40_03050 NZ_CP075116.1 Protein Homology CDS 637433 638797 . + 0 ID=cds-WP_000622080.1;Parent=gene-CCO40_RS03050;Dbxref=GenBank:WP_000622080.1;Name=WP_000622080.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462154.1;locus_tag=CCO40_RS03050;product=L-serine ammonia-lyase;protein_id=WP_000622080.1;transl_table=11 NZ_CP075116.1 RefSeq gene 639113 640444 . + . ID=gene-CCO40_RS03055;Name=CCO40_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03055;old_locus_tag=CCO40_03055 NZ_CP075116.1 Protein Homology CDS 639113 640444 . + 0 ID=cds-WP_000443187.1;Parent=gene-CCO40_RS03055;Dbxref=GenBank:WP_000443187.1;Name=WP_000443187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=CCO40_RS03055;product=SLC5/6 family protein;protein_id=WP_000443187.1;transl_table=11 NZ_CP075116.1 RefSeq gene 640470 641780 . + . ID=gene-CCO40_RS03060;Name=CCO40_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03060;old_locus_tag=CCO40_03060 NZ_CP075116.1 Protein Homology CDS 640470 641780 . + 0 ID=cds-WP_000463090.1;Parent=gene-CCO40_RS03060;Dbxref=GenBank:WP_000463090.1;Name=WP_000463090.1;Ontology_term=GO:0051539,GO:0080146;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,L-cysteine desulfhydrase activity|0080146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462152.1;locus_tag=CCO40_RS03060;product=L-cysteine desulfidase family protein;protein_id=WP_000463090.1;transl_table=11 NZ_CP075116.1 RefSeq gene 641893 642057 . - . ID=gene-CCO40_RS03065;Name=CCO40_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03065;old_locus_tag=CCO40_03065 NZ_CP075116.1 Protein Homology CDS 641893 642057 . - 0 ID=cds-WP_000039324.1;Parent=gene-CCO40_RS03065;Dbxref=GenBank:WP_000039324.1;Name=WP_000039324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462151.1;locus_tag=CCO40_RS03065;product=protein YhaL;protein_id=WP_000039324.1;transl_table=11 NZ_CP075116.1 RefSeq gene 642081 642782 . - . ID=gene-CCO40_RS03070;Name=CCO40_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03070;old_locus_tag=CCO40_03070 NZ_CP075116.1 Protein Homology CDS 642081 642782 . - 0 ID=cds-WP_000633547.1;Parent=gene-CCO40_RS03070;Dbxref=GenBank:WP_000633547.1;Name=WP_000633547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462150.1;locus_tag=CCO40_RS03070;product=pirin family protein;protein_id=WP_000633547.1;transl_table=11 NZ_CP075116.1 RefSeq gene 642887 643783 . + . ID=gene-CCO40_RS03075;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=CCO40_RS03075;old_locus_tag=CCO40_03075 NZ_CP075116.1 Protein Homology CDS 642887 643783 . + 0 ID=cds-WP_001041026.1;Parent=gene-CCO40_RS03075;Dbxref=GenBank:WP_001041026.1;Name=WP_001041026.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462149.1;locus_tag=CCO40_RS03075;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_001041026.1;transl_table=11 NZ_CP075116.1 RefSeq gene 643822 644187 . - . ID=gene-CCO40_RS03080;Name=CCO40_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03080;old_locus_tag=CCO40_03080 NZ_CP075116.1 Protein Homology CDS 643822 644187 . - 0 ID=cds-WP_000384139.1;Parent=gene-CCO40_RS03080;Dbxref=GenBank:WP_000384139.1;Name=WP_000384139.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462148.1;locus_tag=CCO40_RS03080;product=DUF805 domain-containing protein;protein_id=WP_000384139.1;transl_table=11 NZ_CP075116.1 RefSeq gene 644311 645297 . - . ID=gene-CCO40_RS03085;Name=CCO40_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03085;old_locus_tag=CCO40_03085 NZ_CP075116.1 Protein Homology CDS 644311 645297 . - 0 ID=cds-WP_000531161.1;Parent=gene-CCO40_RS03085;Dbxref=GenBank:WP_000531161.1;Name=WP_000531161.1;Ontology_term=GO:0004364,GO:0016491;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462147.1;locus_tag=CCO40_RS03085;product=glutathione S-transferase family protein;protein_id=WP_000531161.1;transl_table=11 NZ_CP075116.1 RefSeq gene 645365 645757 . - . ID=gene-CCO40_RS03090;Name=CCO40_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03090;old_locus_tag=CCO40_03090 NZ_CP075116.1 Protein Homology CDS 645365 645757 . - 0 ID=cds-WP_001592732.1;Parent=gene-CCO40_RS03090;Dbxref=GenBank:WP_001592732.1;Name=WP_001592732.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=CCO40_RS03090;product=DoxX family protein;protein_id=WP_001592732.1;transl_table=11 NZ_CP075116.1 RefSeq gene 645995 646294 . - . ID=gene-CCO40_RS03095;Name=CCO40_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03095;old_locus_tag=CCO40_03095 NZ_CP075116.1 Protein Homology CDS 645995 646294 . - 0 ID=cds-WP_000095496.1;Parent=gene-CCO40_RS03095;Dbxref=GenBank:WP_000095496.1;Name=WP_000095496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462145.1;locus_tag=CCO40_RS03095;product=YqjK-like family protein;protein_id=WP_000095496.1;transl_table=11 NZ_CP075116.1 RefSeq gene 646291 646689 . - . ID=gene-CCO40_RS03100;Name=CCO40_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03100;old_locus_tag=CCO40_03100 NZ_CP075116.1 Protein Homology CDS 646291 646689 . - 0 ID=cds-WP_000785626.1;Parent=gene-CCO40_RS03100;Dbxref=GenBank:WP_000785626.1;Name=WP_000785626.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462144.1;locus_tag=CCO40_RS03100;product=phage holin family protein;protein_id=WP_000785626.1;transl_table=11 NZ_CP075116.1 RefSeq gene 646692 646997 . - . ID=gene-CCO40_RS03105;Name=CCO40_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03105;old_locus_tag=CCO40_03105 NZ_CP075116.1 Protein Homology CDS 646692 646997 . - 0 ID=cds-WP_000031219.1;Parent=gene-CCO40_RS03105;Dbxref=GenBank:WP_000031219.1;Name=WP_000031219.1;Ontology_term=GO:0043022,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462143.1;locus_tag=CCO40_RS03105;product=ElaB/YgaM/YqjD family protein;protein_id=WP_000031219.1;transl_table=11 NZ_CP075116.1 RefSeq gene 647039 647407 . - . ID=gene-CCO40_RS03110;Name=CCO40_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03110;old_locus_tag=CCO40_03110 NZ_CP075116.1 Protein Homology CDS 647039 647407 . - 0 ID=cds-WP_000877297.1;Parent=gene-CCO40_RS03110;Dbxref=GenBank:WP_000877297.1;Name=WP_000877297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462142.1;locus_tag=CCO40_RS03110;product=DUF1090 domain-containing protein;protein_id=WP_000877297.1;transl_table=11 NZ_CP075116.1 RefSeq gene 647552 647935 . - . ID=gene-CCO40_RS03115;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=CCO40_RS03115;old_locus_tag=CCO40_03115 NZ_CP075116.1 Protein Homology CDS 647552 647935 . - 0 ID=cds-WP_000917516.1;Parent=gene-CCO40_RS03115;Dbxref=GenBank:WP_000917516.1;Name=WP_000917516.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462141.1;locus_tag=CCO40_RS03115;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_000917516.1;transl_table=11 NZ_CP075116.1 RefSeq gene 647939 648601 . - . ID=gene-CCO40_RS03120;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=CCO40_RS03120;old_locus_tag=CCO40_03120 NZ_CP075116.1 Protein Homology CDS 647939 648601 . - 0 ID=cds-WP_000422143.1;Parent=gene-CCO40_RS03120;Dbxref=GenBank:WP_000422143.1;Name=WP_000422143.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462140.1;locus_tag=CCO40_RS03120;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_000422143.1;transl_table=11 NZ_CP075116.1 RefSeq gene 649051 650295 . - . ID=gene-CCO40_RS03125;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=CCO40_RS03125;old_locus_tag=CCO40_03125 NZ_CP075116.1 Protein Homology CDS 649051 650295 . - 0 ID=cds-WP_000235361.1;Parent=gene-CCO40_RS03125;Dbxref=GenBank:WP_000235361.1;Name=WP_000235361.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462139.1;locus_tag=CCO40_RS03125;product=serine/threonine transporter SstT;protein_id=WP_000235361.1;transl_table=11 NZ_CP075116.1 RefSeq gene 650550 651518 . - . ID=gene-CCO40_RS03130;Name=CCO40_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03130;old_locus_tag=CCO40_03130 NZ_CP075116.1 Protein Homology CDS 650550 651518 . - 0 ID=cds-WP_001098833.1;Parent=gene-CCO40_RS03130;Dbxref=GenBank:WP_001098833.1;Name=WP_001098833.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462138.1;locus_tag=CCO40_RS03130;product=TerC family protein;protein_id=WP_001098833.1;transl_table=11 NZ_CP075116.1 RefSeq gene 651791 652789 . - . ID=gene-CCO40_RS03135;Name=CCO40_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03135;old_locus_tag=CCO40_03135 NZ_CP075116.1 Protein Homology CDS 651791 652789 . - 0 ID=cds-WP_000617682.1;Parent=gene-CCO40_RS03135;Dbxref=GenBank:WP_000617682.1;Name=WP_000617682.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=CCO40_RS03135;product=Gfo/Idh/MocA family protein;protein_id=WP_000617682.1;transl_table=11 NZ_CP075116.1 RefSeq gene 652878 653570 . - . ID=gene-CCO40_RS03140;Name=CCO40_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03140;old_locus_tag=CCO40_03140 NZ_CP075116.1 Protein Homology CDS 652878 653570 . - 0 ID=cds-WP_000951049.1;Parent=gene-CCO40_RS03140;Dbxref=GenBank:WP_000951049.1;Name=WP_000951049.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462136.1;locus_tag=CCO40_RS03140;product=SanA/YdcF family protein;protein_id=WP_000951049.1;transl_table=11 NZ_CP075116.1 RefSeq gene 653722 654219 . - . ID=gene-CCO40_RS03145;Name=CCO40_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03145;old_locus_tag=CCO40_03145 NZ_CP075116.1 Protein Homology CDS 653722 654219 . - 0 ID=cds-WP_000202966.1;Parent=gene-CCO40_RS03145;Dbxref=GenBank:WP_000202966.1;Name=WP_000202966.1;Ontology_term=GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462135.1;locus_tag=CCO40_RS03145;product=M48 metallopeptidase family protein;protein_id=WP_000202966.1;transl_table=11 NZ_CP075116.1 RefSeq gene 654305 655441 . + . ID=gene-CCO40_RS03150;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=CCO40_RS03150;old_locus_tag=CCO40_03150 NZ_CP075116.1 Protein Homology CDS 654305 655441 . + 0 ID=cds-WP_000019989.1;Parent=gene-CCO40_RS03150;Dbxref=GenBank:WP_000019989.1;Name=WP_000019989.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=CCO40_RS03150;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_000019989.1;transl_table=11 NZ_CP075116.1 RefSeq gene 655522 657540 . - . ID=gene-CCO40_RS03155;Name=CCO40_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03155;old_locus_tag=CCO40_03155 NZ_CP075116.1 Protein Homology CDS 655522 657540 . - 0 ID=cds-WP_094889067.1;Parent=gene-CCO40_RS03155;Dbxref=GenBank:WP_094889067.1;Name=WP_094889067.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=CCO40_RS03155;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_094889067.1;transl_table=11 NZ_CP075116.1 RefSeq gene 657711 659090 . - . ID=gene-CCO40_RS03160;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=CCO40_RS03160;old_locus_tag=CCO40_03160 NZ_CP075116.1 Protein Homology CDS 657711 659090 . - 0 ID=cds-WP_082330223.1;Parent=gene-CCO40_RS03160;Dbxref=GenBank:WP_082330223.1;Name=WP_082330223.1;Ontology_term=GO:0009447,GO:0030170,GO:0033094;gbkey=CDS;gene=ygjG;go_function=pyridoxal phosphate binding|0030170||IEA,putrescine:2-oxoglutarate transaminase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894971.1;locus_tag=CCO40_RS03160;product=putrescine aminotransferase;protein_id=WP_082330223.1;transl_table=11 NZ_CP075116.1 RefSeq gene 659520 661040 . + . ID=gene-CCO40_RS03165;Name=CCO40_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03165;old_locus_tag=CCO40_03165 NZ_CP075116.1 Protein Homology CDS 659520 661040 . + 0 ID=cds-WP_000094649.1;Parent=gene-CCO40_RS03165;Dbxref=GenBank:WP_000094649.1;Name=WP_000094649.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462131.1;locus_tag=CCO40_RS03165;product=methyl-accepting chemotaxis protein;protein_id=WP_000094649.1;transl_table=11 NZ_CP075116.1 RefSeq gene 661428 662993 . + . ID=gene-CCO40_RS03170;Name=CCO40_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03170;old_locus_tag=CCO40_03170 NZ_CP075116.1 Protein Homology CDS 661428 662993 . + 0 ID=cds-WP_000478472.1;Parent=gene-CCO40_RS03170;Dbxref=GenBank:WP_000478472.1;Name=WP_000478472.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462130.1;locus_tag=CCO40_RS03170;product=methyl-accepting chemotaxis protein;protein_id=WP_000478472.1;transl_table=11 NZ_CP075116.1 RefSeq gene 662990 663637 . - . ID=gene-CCO40_RS03175;Name=CCO40_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03175;old_locus_tag=CCO40_03175 NZ_CP075116.1 Protein Homology CDS 662990 663637 . - 0 ID=cds-WP_094889068.1;Parent=gene-CCO40_RS03175;Dbxref=GenBank:WP_094889068.1;Name=WP_094889068.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=CCO40_RS03175;product=PadR family transcriptional regulator;protein_id=WP_094889068.1;transl_table=11 NZ_CP075116.1 RefSeq gene 663869 664636 . + . ID=gene-CCO40_RS03180;Name=CCO40_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03180;old_locus_tag=CCO40_03180 NZ_CP075116.1 Protein Homology CDS 663869 664636 . + 0 ID=cds-WP_000213678.1;Parent=gene-CCO40_RS03180;Dbxref=GenBank:WP_000213678.1;Name=WP_000213678.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462128.1;locus_tag=CCO40_RS03180;product=siderophore-interacting protein;protein_id=WP_000213678.1;transl_table=11 NZ_CP075116.1 RefSeq gene 664716 664791 . - . ID=gene-CCO40_RS03185;Name=CCO40_RS03185;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS03185;old_locus_tag=CCO40_03185 NZ_CP075116.1 tRNAscan-SE tRNA 664716 664791 . - . ID=rna-CCO40_RS03185;Parent=gene-CCO40_RS03185;anticodon=(pos:complement(664756..664758));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS03185;product=tRNA-Ile NZ_CP075116.1 tRNAscan-SE exon 664716 664791 . - . ID=exon-CCO40_RS03185-1;Parent=rna-CCO40_RS03185;anticodon=(pos:complement(664756..664758));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS03185;product=tRNA-Ile NZ_CP075116.1 RefSeq gene 664917 665423 . + . ID=gene-CCO40_RS03190;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=CCO40_RS03190;old_locus_tag=CCO40_03190 NZ_CP075116.1 Protein Homology CDS 664917 665423 . + 0 ID=cds-WP_000237776.1;Parent=gene-CCO40_RS03190;Dbxref=GenBank:WP_000237776.1;Name=WP_000237776.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462127.1;locus_tag=CCO40_RS03190;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000237776.1;transl_table=11 NZ_CP075116.1 RefSeq gene 665547 667394 . - . ID=gene-CCO40_RS03195;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=CCO40_RS03195;old_locus_tag=CCO40_03195 NZ_CP075116.1 Protein Homology CDS 665547 667394 . - 0 ID=cds-WP_001519776.1;Parent=gene-CCO40_RS03195;Dbxref=GenBank:WP_001519776.1;Name=WP_001519776.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311977.1;locus_tag=CCO40_RS03195;product=RNA polymerase sigma factor RpoD;protein_id=WP_001519776.1;transl_table=11 NZ_CP075116.1 RefSeq gene 667544 669289 . - . ID=gene-CCO40_RS03200;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=CCO40_RS03200;old_locus_tag=CCO40_03200 NZ_CP075116.1 Protein Homology CDS 667544 669289 . - 0 ID=cds-WP_000918865.1;Parent=gene-CCO40_RS03200;Dbxref=GenBank:WP_000918865.1;Name=WP_000918865.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462125.1;locus_tag=CCO40_RS03200;product=DNA primase;protein_id=WP_000918865.1;transl_table=11 NZ_CP075116.1 RefSeq gene 669525 669740 . - . ID=gene-CCO40_RS03205;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=CCO40_RS03205;old_locus_tag=CCO40_03205 NZ_CP075116.1 Protein Homology CDS 669525 669740 . - 0 ID=cds-WP_001144069.1;Parent=gene-CCO40_RS03205;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462124.1;locus_tag=CCO40_RS03205;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_CP075116.1 RefSeq gene 669968 670981 . + . ID=gene-CCO40_RS03210;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=CCO40_RS03210;old_locus_tag=CCO40_03210 NZ_CP075116.1 Protein Homology CDS 669968 670981 . + 0 ID=cds-WP_001264394.1;Parent=gene-CCO40_RS03210;Dbxref=GenBank:WP_001264394.1;Name=WP_001264394.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=CCO40_RS03210;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_001264394.1;transl_table=11 NZ_CP075116.1 RefSeq gene 671005 671148 . + . ID=gene-CCO40_RS22600;Name=CCO40_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22600 NZ_CP075116.1 GeneMarkS-2+ CDS 671005 671148 . + 0 ID=cds-WP_001135050.1;Parent=gene-CCO40_RS22600;Dbxref=GenBank:WP_001135050.1;Name=WP_001135050.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO40_RS22600;product=hypothetical protein;protein_id=WP_001135050.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 671104 671248 . - . ID=gene-CCO40_RS03220;Name=CCO40_RS03220;end_range=671248,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS03220;old_locus_tag=CCO40_03220;partial=true;pseudo=true;start_range=.,671104 NZ_CP075116.1 Protein Homology CDS 671104 671248 . - 0 ID=cds-CCO40_RS03220;Parent=gene-CCO40_RS03220;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016829;end_range=671248,.;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311971.1;locus_tag=CCO40_RS03220;partial=true;product=fumarate hydratase;pseudo=true;start_range=.,671104;transl_table=11 NZ_CP075116.1 RefSeq gene 671232 671843 . - . ID=gene-CCO40_RS03225;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=CCO40_RS03225;old_locus_tag=CCO40_03225 NZ_CP075116.1 Protein Homology CDS 671232 671843 . - 0 ID=cds-WP_001272784.1;Parent=gene-CCO40_RS03225;Dbxref=GenBank:WP_001272784.1;Name=WP_001272784.1;Ontology_term=GO:0006654,GO:0016747,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462122.1;locus_tag=CCO40_RS03225;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272784.1;transl_table=11 NZ_CP075116.1 RefSeq gene 671950 672309 . + . ID=gene-CCO40_RS03230;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=CCO40_RS03230;old_locus_tag=CCO40_03230 NZ_CP075116.1 Protein Homology CDS 671950 672309 . + 0 ID=cds-WP_000355776.1;Parent=gene-CCO40_RS03230;Dbxref=GenBank:WP_000355776.1;Name=WP_000355776.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681574.1;locus_tag=CCO40_RS03230;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_000355776.1;transl_table=11 NZ_CP075116.1 RefSeq gene 672407 673228 . + . ID=gene-CCO40_RS03235;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=CCO40_RS03235;old_locus_tag=CCO40_03235 NZ_CP075116.1 Protein Homology CDS 672407 673228 . + 0 ID=cds-WP_001281933.1;Parent=gene-CCO40_RS03235;Dbxref=GenBank:WP_001281933.1;Name=WP_001281933.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=CCO40_RS03235;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001281933.1;transl_table=11 NZ_CP075116.1 RefSeq gene 673333 674574 . - . ID=gene-CCO40_RS03240;Name=CCO40_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03240;old_locus_tag=CCO40_03240 NZ_CP075116.1 Protein Homology CDS 673333 674574 . - 0 ID=cds-WP_000708447.1;Parent=gene-CCO40_RS03240;Dbxref=GenBank:WP_000708447.1;Name=WP_000708447.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462119.1;locus_tag=CCO40_RS03240;product=multifunctional CCA addition/repair protein;protein_id=WP_000708447.1;transl_table=11 NZ_CP075116.1 RefSeq gene 674637 675251 . - . ID=gene-CCO40_RS03245;Name=CCO40_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03245;old_locus_tag=CCO40_03245 NZ_CP075116.1 Protein Homology CDS 674637 675251 . - 0 ID=cds-WP_001125344.1;Parent=gene-CCO40_RS03245;Dbxref=GenBank:WP_001125344.1;Name=WP_001125344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462118.1;locus_tag=CCO40_RS03245;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001125344.1;transl_table=11 NZ_CP075116.1 RefSeq gene 675493 676794 . + . ID=gene-CCO40_RS03250;Name=CCO40_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03250;old_locus_tag=CCO40_03250 NZ_CP075116.1 Protein Homology CDS 675493 676794 . + 0 ID=cds-WP_000046214.1;Parent=gene-CCO40_RS03250;Dbxref=GenBank:WP_000046214.1;Name=WP_000046214.1;Ontology_term=GO:0046872,GO:0050355;gbkey=CDS;go_function=metal ion binding|0046872||IEA,inorganic triphosphate phosphatase activity|0050355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462117.1;locus_tag=CCO40_RS03250;product=CYTH domain-containing protein;protein_id=WP_000046214.1;transl_table=11 NZ_CP075116.1 RefSeq gene 676912 679755 . + . ID=gene-CCO40_RS03255;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=CCO40_RS03255;old_locus_tag=CCO40_03255 NZ_CP075116.1 Protein Homology CDS 676912 679755 . + 0 ID=cds-WP_000188295.1;Parent=gene-CCO40_RS03255;Dbxref=GenBank:WP_000188295.1;Name=WP_000188295.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462116.1;locus_tag=CCO40_RS03255;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_000188295.1;transl_table=11 NZ_CP075116.1 RefSeq gene 679803 681236 . + . ID=gene-CCO40_RS03260;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=CCO40_RS03260;old_locus_tag=CCO40_03260 NZ_CP075116.1 Protein Homology CDS 679803 681236 . + 0 ID=cds-WP_000867682.1;Parent=gene-CCO40_RS03260;Dbxref=GenBank:WP_000867682.1;Name=WP_000867682.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462115.1;locus_tag=CCO40_RS03260;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_000867682.1;transl_table=11 NZ_CP075116.1 RefSeq gene 681396 681455 . - . ID=gene-CCO40_RS03265;Name=CCO40_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03265;old_locus_tag=CCO40_03265 NZ_CP075116.1 Protein Homology CDS 681396 681455 . - 0 ID=cds-WP_001804776.1;Parent=gene-CCO40_RS03265;Dbxref=GenBank:WP_001804776.1;Name=WP_001804776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=CCO40_RS03265;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001804776.1;transl_table=11 NZ_CP075116.1 RefSeq gene 681695 683374 . - . ID=gene-CCO40_RS03270;Name=CCO40_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03270;old_locus_tag=CCO40_03270 NZ_CP075116.1 Protein Homology CDS 681695 683374 . - 0 ID=cds-WP_000342882.1;Parent=gene-CCO40_RS03270;Dbxref=GenBank:WP_000342882.1;Name=WP_000342882.1;Ontology_term=GO:0016020,GO:0016600;gbkey=CDS;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=CCO40_RS03270;product=flotillin family protein;protein_id=WP_000342882.1;transl_table=11 NZ_CP075116.1 RefSeq gene 683393 684013 . - . ID=gene-CCO40_RS03275;Name=CCO40_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03275;old_locus_tag=CCO40_03275 NZ_CP075116.1 Protein Homology CDS 683393 684013 . - 0 ID=cds-WP_000171738.1;Parent=gene-CCO40_RS03275;Dbxref=GenBank:WP_000171738.1;Name=WP_000171738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462113.1;locus_tag=CCO40_RS03275;product=OB-fold-containig protein;protein_id=WP_000171738.1;transl_table=11 NZ_CP075116.1 RefSeq gene 684271 684480 . + . ID=gene-CCO40_RS03280;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=CCO40_RS03280;old_locus_tag=CCO40_03280 NZ_CP075116.1 Protein Homology CDS 684271 684480 . + 0 ID=cds-WP_000928927.1;Parent=gene-CCO40_RS03280;Dbxref=GenBank:WP_000928927.1;Name=WP_000928927.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=CCO40_RS03280;product=cell surface composition regulator GlgS;protein_id=WP_000928927.1;transl_table=11 NZ_CP075116.1 RefSeq gene 684554 684850 . - . ID=gene-CCO40_RS03285;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=CCO40_RS03285;old_locus_tag=CCO40_03285 NZ_CP075116.1 Protein Homology CDS 684554 684850 . - 0 ID=cds-WP_000566824.1;Parent=gene-CCO40_RS03285;Dbxref=GenBank:WP_000566824.1;Name=WP_000566824.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566826.1;locus_tag=CCO40_RS03285;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_000566824.1;transl_table=11 NZ_CP075116.1 cmsearch riboswitch 684983 685181 . + . ID=id-NZ_CP075116.1:684983..685181;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00050,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CP075116.1 RefSeq gene 685287 685940 . + . ID=gene-CCO40_RS03290;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=CCO40_RS03290;old_locus_tag=CCO40_03290 NZ_CP075116.1 Protein Homology CDS 685287 685940 . + 0 ID=cds-WP_001076978.1;Parent=gene-CCO40_RS03290;Dbxref=GenBank:WP_001076978.1;Name=WP_001076978.1;Ontology_term=GO:0009231,GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462110.1;locus_tag=CCO40_RS03290;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001076978.1;transl_table=11 NZ_CP075116.1 RefSeq gene 686110 686787 . - . ID=gene-CCO40_RS03295;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=CCO40_RS03295;old_locus_tag=CCO40_03295 NZ_CP075116.1 Protein Homology CDS 686110 686787 . - 0 ID=cds-WP_000345576.1;Parent=gene-CCO40_RS03295;Dbxref=GenBank:WP_000345576.1;Name=WP_000345576.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462109.1;locus_tag=CCO40_RS03295;product=protein-disulfide oxidoreductase DsbI;protein_id=WP_000345576.1;transl_table=11 NZ_CP075116.1 RefSeq gene 686802 687473 . - . ID=gene-CCO40_RS03300;Name=CCO40_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03300;old_locus_tag=CCO40_03300 NZ_CP075116.1 Protein Homology CDS 686802 687473 . - 0 ID=cds-WP_000096230.1;Parent=gene-CCO40_RS03300;Dbxref=GenBank:WP_000096230.1;Name=WP_000096230.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462108.1;locus_tag=CCO40_RS03300;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_000096230.1;transl_table=11 NZ_CP075116.1 RefSeq gene 687493 689289 . - . ID=gene-CCO40_RS03305;Name=assT;gbkey=Gene;gene=assT;gene_biotype=protein_coding;gene_synonym=astA;locus_tag=CCO40_RS03305;old_locus_tag=CCO40_03305 NZ_CP075116.1 Protein Homology CDS 687493 689289 . - 0 ID=cds-WP_000460259.1;Parent=gene-CCO40_RS03305;Dbxref=GenBank:WP_000460259.1;Name=WP_000460259.1;gbkey=CDS;gene=assT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_490511131.1;locus_tag=CCO40_RS03305;product=arylsulfate sulfotransferase AssT;protein_id=WP_000460259.1;transl_table=11 NZ_CP075116.1 RefSeq gene 689689 689865 . + . ID=gene-CCO40_RS22605;Name=CCO40_RS22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22605 NZ_CP075116.1 Protein Homology CDS 689689 689865 . + 0 ID=cds-WP_000469259.1;Parent=gene-CCO40_RS22605;Dbxref=GenBank:WP_000469259.1;Name=WP_000469259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=CCO40_RS22605;product=hypothetical protein;protein_id=WP_000469259.1;transl_table=11 NZ_CP075116.1 RefSeq gene 689932 690705 . - . ID=gene-CCO40_RS03310;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=CCO40_RS03310;old_locus_tag=CCO40_03310 NZ_CP075116.1 Protein Homology CDS 689932 690705 . - 0 ID=cds-WP_000960953.1;Parent=gene-CCO40_RS03310;Dbxref=GenBank:WP_000960953.1;Name=WP_000960953.1;Ontology_term=GO:0030001,GO:0046873;gbkey=CDS;gene=zupT;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462105.1;locus_tag=CCO40_RS03310;product=zinc transporter ZupT;protein_id=WP_000960953.1;transl_table=11 NZ_CP075116.1 RefSeq gene 690846 691634 . + . ID=gene-CCO40_RS03315;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=CCO40_RS03315;old_locus_tag=CCO40_03315 NZ_CP075116.1 Protein Homology CDS 690846 691634 . + 0 ID=cds-WP_001536714.1;Parent=gene-CCO40_RS03315;Dbxref=GenBank:WP_001536714.1;Name=WP_001536714.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=CCO40_RS03315;product=4%2C5-DOPA-extradiol-dioxygenase;protein_id=WP_001536714.1;transl_table=11 NZ_CP075116.1 RefSeq gene 691696 692859 . - . ID=gene-CCO40_RS03320;Name=CCO40_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03320;old_locus_tag=CCO40_03320 NZ_CP075116.1 Protein Homology CDS 691696 692859 . - 0 ID=cds-WP_000442833.1;Parent=gene-CCO40_RS03320;Dbxref=GenBank:WP_000442833.1;Name=WP_000442833.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462103.1;locus_tag=CCO40_RS03320;product=glutathionylspermidine synthase family protein;protein_id=WP_000442833.1;transl_table=11 NZ_CP075116.1 RefSeq gene 692865 693536 . - . ID=gene-CCO40_RS03325;Name=CCO40_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03325;old_locus_tag=CCO40_03325 NZ_CP075116.1 Protein Homology CDS 692865 693536 . - 0 ID=cds-WP_000831520.1;Parent=gene-CCO40_RS03325;Dbxref=GenBank:WP_000831520.1;Name=WP_000831520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462102.1;locus_tag=CCO40_RS03325;product=DUF1190 family protein;protein_id=WP_000831520.1;transl_table=11 NZ_CP075116.1 RefSeq gene 693749 695224 . - . ID=gene-CCO40_RS03330;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=CCO40_RS03330;old_locus_tag=CCO40_03330 NZ_CP075116.1 Protein Homology CDS 693749 695224 . - 0 ID=cds-WP_001663008.1;Parent=gene-CCO40_RS03330;Dbxref=GenBank:WP_001663008.1;Name=WP_001663008.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462101.3;locus_tag=CCO40_RS03330;product=outer membrane channel protein TolC;protein_id=WP_001663008.1;transl_table=11 NZ_CP075116.1 RefSeq gene 695425 696057 . + . ID=gene-CCO40_RS03335;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=CCO40_RS03335;old_locus_tag=CCO40_03335 NZ_CP075116.1 Protein Homology CDS 695425 696057 . + 0 ID=cds-WP_001231950.1;Parent=gene-CCO40_RS03335;Dbxref=GenBank:WP_001231950.1;Name=WP_001231950.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462100.1;locus_tag=CCO40_RS03335;product=ADP-ribose diphosphatase;protein_id=WP_001231950.1;transl_table=11 NZ_CP075116.1 RefSeq gene 696054 696476 . + . ID=gene-CCO40_RS03340;Name=CCO40_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03340;old_locus_tag=CCO40_03340 NZ_CP075116.1 Protein Homology CDS 696054 696476 . + 0 ID=cds-WP_000833404.1;Parent=gene-CCO40_RS03340;Dbxref=GenBank:WP_000833404.1;Name=WP_000833404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462099.1;locus_tag=CCO40_RS03340;product=DUF1249 family protein;protein_id=WP_000833404.1;transl_table=11 NZ_CP075116.1 RefSeq gene 696501 697328 . + . ID=gene-CCO40_RS03345;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=CCO40_RS03345;old_locus_tag=CCO40_03345 NZ_CP075116.1 Protein Homology CDS 696501 697328 . + 0 ID=cds-WP_000444735.1;Parent=gene-CCO40_RS03345;Dbxref=GenBank:WP_000444735.1;Name=WP_000444735.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462098.1;locus_tag=CCO40_RS03345;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444735.1;transl_table=11 NZ_CP075116.1 RefSeq gene 697328 697909 . + . ID=gene-CCO40_RS03350;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=CCO40_RS03350;old_locus_tag=CCO40_03350 NZ_CP075116.1 Protein Homology CDS 697328 697909 . + 0 ID=cds-WP_000105725.1;Parent=gene-CCO40_RS03350;Dbxref=GenBank:WP_000105725.1;Name=WP_000105725.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462097.1;locus_tag=CCO40_RS03350;product=esterase YqiA;protein_id=WP_000105725.1;transl_table=11 NZ_CP075116.1 RefSeq gene 697937 699829 . + . ID=gene-CCO40_RS03355;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=CCO40_RS03355;old_locus_tag=CCO40_03355 NZ_CP075116.1 Protein Homology CDS 697937 699829 . + 0 ID=cds-WP_000195318.1;Parent=gene-CCO40_RS03355;Dbxref=GenBank:WP_000195318.1;Name=WP_000195318.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462096.1;locus_tag=CCO40_RS03355;product=DNA topoisomerase IV subunit B;protein_id=WP_000195318.1;transl_table=11 NZ_CP075116.1 RefSeq gene 699954 700268 . - . ID=gene-CCO40_RS03360;Name=CCO40_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03360;old_locus_tag=CCO40_03360 NZ_CP075116.1 Protein Homology CDS 699954 700268 . - 0 ID=cds-WP_000958587.1;Parent=gene-CCO40_RS03360;Dbxref=GenBank:WP_000958587.1;Name=WP_000958587.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462095.1;locus_tag=CCO40_RS03360;product=putative quinol monooxygenase;protein_id=WP_000958587.1;transl_table=11 NZ_CP075116.1 RefSeq gene 700300 700881 . - . ID=gene-CCO40_RS03365;Name=CCO40_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03365;old_locus_tag=CCO40_03365 NZ_CP075116.1 Protein Homology CDS 700300 700881 . - 0 ID=cds-WP_000065416.1;Parent=gene-CCO40_RS03365;Dbxref=GenBank:WP_000065416.1;Name=WP_000065416.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=CCO40_RS03365;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_000065416.1;transl_table=11 NZ_CP075116.1 RefSeq gene 700988 702337 . - . ID=gene-CCO40_RS03370;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=CCO40_RS03370;old_locus_tag=CCO40_03370 NZ_CP075116.1 Protein Homology CDS 700988 702337 . - 0 ID=cds-WP_080169883.1;Parent=gene-CCO40_RS03370;Dbxref=GenBank:WP_080169883.1;Name=WP_080169883.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=CCO40_RS03370;product=quorum sensing histidine kinase QseC;protein_id=WP_080169883.1;transl_table=11 NZ_CP075116.1 RefSeq gene 702334 702993 . - . ID=gene-CCO40_RS03375;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=CCO40_RS03375;old_locus_tag=CCO40_03375 NZ_CP075116.1 Protein Homology CDS 702334 702993 . - 0 ID=cds-WP_001221574.1;Parent=gene-CCO40_RS03375;Dbxref=GenBank:WP_001221574.1;Name=WP_001221574.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462092.1;locus_tag=CCO40_RS03375;product=quorum sensing response regulator transcription factor QseB;protein_id=WP_001221574.1;transl_table=11 NZ_CP075116.1 RefSeq gene 703145 703537 . + . ID=gene-CCO40_RS03380;Name=CCO40_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03380;old_locus_tag=CCO40_03380 NZ_CP075116.1 Protein Homology CDS 703145 703537 . + 0 ID=cds-WP_001748647.1;Parent=gene-CCO40_RS03380;Dbxref=GenBank:WP_001748647.1;Name=WP_001748647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462091.1;locus_tag=CCO40_RS03380;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_001748647.1;transl_table=11 NZ_CP075116.1 RefSeq gene 703609 704475 . + . ID=gene-CCO40_RS03385;Name=CCO40_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03385;old_locus_tag=CCO40_03385 NZ_CP075116.1 Protein Homology CDS 703609 704475 . + 0 ID=cds-WP_094889069.1;Parent=gene-CCO40_RS03385;Dbxref=GenBank:WP_094889069.1;Name=WP_094889069.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462090.1;locus_tag=CCO40_RS03385;product=AraC family transcriptional regulator;protein_id=WP_094889069.1;transl_table=11 NZ_CP075116.1 RefSeq gene 704586 706844 . + . ID=gene-CCO40_RS03390;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=CCO40_RS03390;old_locus_tag=CCO40_03390 NZ_CP075116.1 Protein Homology CDS 704586 706844 . + 0 ID=cds-WP_001524053.1;Parent=gene-CCO40_RS03390;Dbxref=GenBank:WP_001524053.1;Name=WP_001524053.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462089.1;locus_tag=CCO40_RS03390;product=DNA topoisomerase IV subunit A;protein_id=WP_001524053.1;transl_table=11 NZ_CP075116.1 RefSeq gene 707101 707838 . + . ID=gene-CCO40_RS03395;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=CCO40_RS03395;old_locus_tag=CCO40_03395 NZ_CP075116.1 Protein Homology CDS 707101 707838 . + 0 ID=cds-WP_000965730.1;Parent=gene-CCO40_RS03395;Dbxref=GenBank:WP_000965730.1;Name=WP_000965730.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462088.1;locus_tag=CCO40_RS03395;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_000965730.1;transl_table=11 NZ_CP075116.1 RefSeq gene 707912 709324 . + . ID=gene-CCO40_RS03400;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=CCO40_RS03400;old_locus_tag=CCO40_03400 NZ_CP075116.1 Protein Homology CDS 707912 709324 . + 0 ID=cds-WP_000010658.1;Parent=gene-CCO40_RS03400;Dbxref=GenBank:WP_000010658.1;Name=WP_000010658.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462087.1;locus_tag=CCO40_RS03400;product=cell division protein FtsP;protein_id=WP_000010658.1;transl_table=11 NZ_CP075116.1 RefSeq gene 709369 710676 . - . ID=gene-CCO40_RS03405;Name=CCO40_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03405;old_locus_tag=CCO40_03405 NZ_CP075116.1 Protein Homology CDS 709369 710676 . - 0 ID=cds-WP_000345259.1;Parent=gene-CCO40_RS03405;Dbxref=GenBank:WP_000345259.1;Name=WP_000345259.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462086.1;locus_tag=CCO40_RS03405;product=TRAP transporter large permease;protein_id=WP_000345259.1;transl_table=11 NZ_CP075116.1 RefSeq gene 710687 711169 . - . ID=gene-CCO40_RS03410;Name=CCO40_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03410;old_locus_tag=CCO40_03410 NZ_CP075116.1 Protein Homology CDS 710687 711169 . - 0 ID=cds-WP_001221828.1;Parent=gene-CCO40_RS03410;Dbxref=GenBank:WP_001221828.1;Name=WP_001221828.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462085.1;locus_tag=CCO40_RS03410;product=TRAP transporter small permease;protein_id=WP_001221828.1;transl_table=11 NZ_CP075116.1 RefSeq gene 711211 712194 . - . ID=gene-CCO40_RS03415;Name=CCO40_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03415;old_locus_tag=CCO40_03415 NZ_CP075116.1 Protein Homology CDS 711211 712194 . - 0 ID=cds-WP_094889070.1;Parent=gene-CCO40_RS03415;Dbxref=GenBank:WP_094889070.1;Name=WP_094889070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462084.1;locus_tag=CCO40_RS03415;product=TRAP transporter substrate-binding protein;protein_id=WP_094889070.1;transl_table=11 NZ_CP075116.1 RefSeq gene 712682 714853 . + . ID=gene-CCO40_RS03420;Name=CCO40_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03420;old_locus_tag=CCO40_03420 NZ_CP075116.1 Protein Homology CDS 712682 714853 . + 0 ID=cds-WP_001274458.1;Parent=gene-CCO40_RS03420;Dbxref=GenBank:WP_001274458.1;Name=WP_001274458.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462083.1;locus_tag=CCO40_RS03420;product=YgiQ family radical SAM protein;protein_id=WP_001274458.1;transl_table=11 NZ_CP075116.1 RefSeq gene 715056 715250 . + . ID=gene-CCO40_RS03425;Name=CCO40_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03425;old_locus_tag=CCO40_03425 NZ_CP075116.1 GeneMarkS-2+ CDS 715056 715250 . + 0 ID=cds-WP_000525384.1;Parent=gene-CCO40_RS03425;Dbxref=GenBank:WP_000525384.1;Name=WP_000525384.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO40_RS03425;product=hypothetical protein;protein_id=WP_000525384.1;transl_table=11 NZ_CP075116.1 RefSeq gene 715408 715863 . - . ID=gene-CCO40_RS03430;Name=CCO40_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03430;old_locus_tag=CCO40_03430 NZ_CP075116.1 Protein Homology CDS 715408 715863 . - 0 ID=cds-WP_000128242.1;Parent=gene-CCO40_RS03430;Dbxref=GenBank:WP_000128242.1;Name=WP_000128242.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462082.1;locus_tag=CCO40_RS03430;product=HIT family protein;protein_id=WP_000128242.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 715908 717372 . - . ID=gene-CCO40_RS03435;Name=CCO40_RS03435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS03435;old_locus_tag=CCO40_03435;pseudo=true NZ_CP075116.1 Protein Homology CDS 715908 717372 . - 0 ID=cds-CCO40_RS03435;Parent=gene-CCO40_RS03435;Note=frameshifted;Ontology_term=GO:0006820,GO:0008509,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507180.1;locus_tag=CCO40_RS03435;product=DASS family sodium-coupled anion symporter;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 717559 718386 . - . ID=gene-CCO40_RS03440;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=CCO40_RS03440;old_locus_tag=CCO40_03440 NZ_CP075116.1 Protein Homology CDS 717559 718386 . - 0 ID=cds-WP_000013100.1;Parent=gene-CCO40_RS03440;Dbxref=GenBank:WP_000013100.1;Name=WP_000013100.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=CCO40_RS03440;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_000013100.1;transl_table=11 NZ_CP075116.1 RefSeq gene 718492 719655 . - . ID=gene-CCO40_RS03445;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=CCO40_RS03445;old_locus_tag=CCO40_03445 NZ_CP075116.1 Protein Homology CDS 718492 719655 . - 0 ID=cds-WP_094889071.1;Parent=gene-CCO40_RS03445;Dbxref=GenBank:WP_094889071.1;Name=WP_094889071.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462079.1;locus_tag=CCO40_RS03445;product=alcohol dehydrogenase;protein_id=WP_094889071.1;transl_table=11 NZ_CP075116.1 RefSeq gene 719848 720747 . + . ID=gene-CCO40_RS03450;Name=CCO40_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03450;old_locus_tag=CCO40_03450 NZ_CP075116.1 Protein Homology CDS 719848 720747 . + 0 ID=cds-WP_001078198.1;Parent=gene-CCO40_RS03450;Dbxref=GenBank:WP_001078198.1;Name=WP_001078198.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=CCO40_RS03450;product=AraC family transcriptional regulator;protein_id=WP_001078198.1;transl_table=11 NZ_CP075116.1 RefSeq gene 720811 721470 . - . ID=gene-CCO40_RS03455;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=CCO40_RS03455;old_locus_tag=CCO40_03455 NZ_CP075116.1 Protein Homology CDS 720811 721470 . - 0 ID=cds-WP_000268444.1;Parent=gene-CCO40_RS03455;Dbxref=GenBank:WP_000268444.1;Name=WP_000268444.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462077.1;locus_tag=CCO40_RS03455;product=DedA family general envelope maintenance protein YghB;protein_id=WP_000268444.1;transl_table=11 NZ_CP075116.1 RefSeq gene 721610 722797 . - . ID=gene-CCO40_RS03460;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=CCO40_RS03460;old_locus_tag=CCO40_03460 NZ_CP075116.1 Protein Homology CDS 721610 722797 . - 0 ID=cds-WP_000130270.1;Parent=gene-CCO40_RS03460;Dbxref=GenBank:WP_000130270.1;Name=WP_000130270.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462076.1;locus_tag=CCO40_RS03460;product=cystathionine beta-lyase;protein_id=WP_000130270.1;transl_table=11 NZ_CP075116.1 RefSeq gene 723049 723783 . + . ID=gene-CCO40_RS03465;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=CCO40_RS03465;old_locus_tag=CCO40_03465 NZ_CP075116.1 Protein Homology CDS 723049 723783 . + 0 ID=cds-WP_000527862.1;Parent=gene-CCO40_RS03465;Dbxref=GenBank:WP_000527862.1;Name=WP_000527862.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462074.1;locus_tag=CCO40_RS03465;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_000527862.1;transl_table=11 NZ_CP075116.1 RefSeq gene 723790 724215 . + . ID=gene-CCO40_RS03470;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=CCO40_RS03470;old_locus_tag=CCO40_03470 NZ_CP075116.1 Protein Homology CDS 723790 724215 . + 0 ID=cds-WP_001251476.1;Parent=gene-CCO40_RS03470;Dbxref=GenBank:WP_001251476.1;Name=WP_001251476.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462073.1;locus_tag=CCO40_RS03470;product=TonB system transport protein ExbD;protein_id=WP_001251476.1;transl_table=11 NZ_CP075116.1 RefSeq gene 724328 725212 . - . ID=gene-CCO40_RS03475;Name=CCO40_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03475;old_locus_tag=CCO40_03475 NZ_CP075116.1 Protein Homology CDS 724328 725212 . - 0 ID=cds-WP_000019032.1;Parent=gene-CCO40_RS03475;Dbxref=GenBank:WP_000019032.1;Name=WP_000019032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462072.1;locus_tag=CCO40_RS03475;product=SDR family oxidoreductase;protein_id=WP_000019032.1;transl_table=11 NZ_CP075116.1 RefSeq gene 725336 725740 . - . ID=gene-CCO40_RS03480;Name=CCO40_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03480;old_locus_tag=CCO40_03480 NZ_CP075116.1 Protein Homology CDS 725336 725740 . - 0 ID=cds-WP_000665657.1;Parent=gene-CCO40_RS03480;Dbxref=GenBank:WP_000665657.1;Name=WP_000665657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=CCO40_RS03480;product=hypothetical protein;protein_id=WP_000665657.1;transl_table=11 NZ_CP075116.1 RefSeq gene 725727 726137 . - . ID=gene-CCO40_RS03485;Name=CCO40_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03485;old_locus_tag=CCO40_03485 NZ_CP075116.1 Protein Homology CDS 725727 726137 . - 0 ID=cds-WP_000936444.1;Parent=gene-CCO40_RS03485;Dbxref=GenBank:WP_000936444.1;Name=WP_000936444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462070.1;locus_tag=CCO40_RS03485;product=hypothetical protein;protein_id=WP_000936444.1;transl_table=11 NZ_CP075116.1 RefSeq gene 726241 726744 . + . ID=gene-CCO40_RS03490;Name=CCO40_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03490;old_locus_tag=CCO40_03490 NZ_CP075116.1 Protein Homology CDS 726241 726744 . + 0 ID=cds-WP_001532618.1;Parent=gene-CCO40_RS03490;Dbxref=GenBank:WP_001532618.1;Name=WP_001532618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441059.1;locus_tag=CCO40_RS03490;product=ESA_00282 family adhesion-associated protein;protein_id=WP_001532618.1;transl_table=11 NZ_CP075116.1 RefSeq gene 727023 727517 . + . ID=gene-CCO40_RS03495;Name=CCO40_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03495;old_locus_tag=CCO40_03495 NZ_CP075116.1 Protein Homology CDS 727023 727517 . + 0 ID=cds-WP_000439335.1;Parent=gene-CCO40_RS03495;Dbxref=GenBank:WP_000439335.1;Name=WP_000439335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462068.1;locus_tag=CCO40_RS03495;product=TIGR00645 family protein;protein_id=WP_000439335.1;transl_table=11 NZ_CP075116.1 RefSeq gene 727824 729467 . + . ID=gene-CCO40_RS03500;Name=CCO40_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03500;old_locus_tag=CCO40_03500 NZ_CP075116.1 Protein Homology CDS 727824 729467 . + 0 ID=cds-WP_001238432.1;Parent=gene-CCO40_RS03500;Dbxref=GenBank:WP_001238432.1;Name=WP_001238432.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=CCO40_RS03500;product=methyl-accepting chemotaxis protein;protein_id=WP_001238432.1;transl_table=11 NZ_CP075116.1 RefSeq gene 729552 729839 . + . ID=gene-CCO40_RS03505;Name=CCO40_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03505;old_locus_tag=CCO40_03505 NZ_CP075116.1 Protein Homology CDS 729552 729839 . + 0 ID=cds-WP_001059119.1;Parent=gene-CCO40_RS03505;Dbxref=GenBank:WP_001059119.1;Name=WP_001059119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462066.1;locus_tag=CCO40_RS03505;product=DUF2623 family protein;protein_id=WP_001059119.1;transl_table=11 NZ_CP075116.1 RefSeq gene 730029 731147 . + . ID=gene-CCO40_RS03510;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=CCO40_RS03510;old_locus_tag=CCO40_03510 NZ_CP075116.1 Protein Homology CDS 730029 731147 . + 0 ID=cds-WP_000145429.1;Parent=gene-CCO40_RS03510;Dbxref=GenBank:WP_000145429.1;Name=WP_000145429.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462065.1;locus_tag=CCO40_RS03510;product=hydrogenase 2 small subunit;protein_id=WP_000145429.1;transl_table=11 NZ_CP075116.1 RefSeq gene 731150 732136 . + . ID=gene-CCO40_RS03515;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=CCO40_RS03515;old_locus_tag=CCO40_03515 NZ_CP075116.1 Protein Homology CDS 731150 732136 . + 0 ID=cds-WP_001081721.1;Parent=gene-CCO40_RS03515;Dbxref=GenBank:WP_001081721.1;Name=WP_001081721.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462064.1;locus_tag=CCO40_RS03515;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081721.1;transl_table=11 NZ_CP075116.1 RefSeq gene 732126 733304 . + . ID=gene-CCO40_RS03520;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=CCO40_RS03520;old_locus_tag=CCO40_03520 NZ_CP075116.1 Protein Homology CDS 732126 733304 . + 0 ID=cds-WP_000017678.1;Parent=gene-CCO40_RS03520;Dbxref=GenBank:WP_000017678.1;Name=WP_000017678.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=CCO40_RS03520;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_000017678.1;transl_table=11 NZ_CP075116.1 RefSeq gene 733301 735004 . + . ID=gene-CCO40_RS03525;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=CCO40_RS03525;old_locus_tag=CCO40_03525 NZ_CP075116.1 Protein Homology CDS 733301 735004 . + 0 ID=cds-WP_000083044.1;Parent=gene-CCO40_RS03525;Dbxref=GenBank:WP_000083044.1;Name=WP_000083044.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462062.1;locus_tag=CCO40_RS03525;product=hydrogenase 2 large subunit;protein_id=WP_000083044.1;transl_table=11 NZ_CP075116.1 RefSeq gene 735004 735498 . + . ID=gene-CCO40_RS03530;Name=CCO40_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03530;old_locus_tag=CCO40_03530 NZ_CP075116.1 Protein Homology CDS 735004 735498 . + 0 ID=cds-WP_001221960.1;Parent=gene-CCO40_RS03530;Dbxref=GenBank:WP_001221960.1;Name=WP_001221960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462061.1;locus_tag=CCO40_RS03530;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221960.1;transl_table=11 NZ_CP075116.1 RefSeq gene 735491 735979 . + . ID=gene-CCO40_RS03535;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=CCO40_RS03535;old_locus_tag=CCO40_03535 NZ_CP075116.1 Protein Homology CDS 735491 735979 . + 0 ID=cds-WP_000004956.1;Parent=gene-CCO40_RS03535;Dbxref=GenBank:WP_000004956.1;Name=WP_000004956.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462060.1;locus_tag=CCO40_RS03535;product=hydrogenase-2 assembly chaperone;protein_id=WP_000004956.1;transl_table=11 NZ_CP075116.1 RefSeq gene 735972 736313 . + . ID=gene-CCO40_RS03540;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=CCO40_RS03540;old_locus_tag=CCO40_03540 NZ_CP075116.1 Protein Homology CDS 735972 736313 . + 0 ID=cds-WP_000544945.1;Parent=gene-CCO40_RS03540;Dbxref=GenBank:WP_000544945.1;Name=WP_000544945.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462059.1;locus_tag=CCO40_RS03540;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544945.1;transl_table=11 NZ_CP075116.1 RefSeq gene 736341 736589 . + . ID=gene-CCO40_RS03545;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=CCO40_RS03545;old_locus_tag=CCO40_03545 NZ_CP075116.1 Protein Homology CDS 736341 736589 . + 0 ID=cds-WP_000334887.1;Parent=gene-CCO40_RS03545;Dbxref=GenBank:WP_000334887.1;Name=WP_000334887.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462058.1;locus_tag=CCO40_RS03545;product=hydrogenase maturation factor HybG;protein_id=WP_000334887.1;transl_table=11 NZ_CP075116.1 RefSeq gene 736665 737717 . + . ID=gene-CCO40_RS03550;Name=CCO40_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03550;old_locus_tag=CCO40_03550 NZ_CP075116.1 Protein Homology CDS 736665 737717 . + 0 ID=cds-WP_001032007.1;Parent=gene-CCO40_RS03550;Dbxref=GenBank:WP_001032007.1;Name=WP_001032007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462057.1;locus_tag=CCO40_RS03550;product=ABC transporter substrate-binding protein;protein_id=WP_001032007.1;transl_table=11 NZ_CP075116.1 RefSeq gene 737717 738427 . + . ID=gene-CCO40_RS03555;Name=CCO40_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03555;old_locus_tag=CCO40_03555 NZ_CP075116.1 Protein Homology CDS 737717 738427 . + 0 ID=cds-WP_001220945.1;Parent=gene-CCO40_RS03555;Dbxref=GenBank:WP_001220945.1;Name=WP_001220945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=CCO40_RS03555;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_001220945.1;transl_table=11 NZ_CP075116.1 RefSeq gene 738495 739361 . - . ID=gene-CCO40_RS03560;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=CCO40_RS03560;old_locus_tag=CCO40_03560 NZ_CP075116.1 Protein Homology CDS 738495 739361 . - 0 ID=cds-WP_000774852.1;Parent=gene-CCO40_RS03560;Dbxref=GenBank:WP_000774852.1;Name=WP_000774852.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=CCO40_RS03560;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_000774852.1;transl_table=11 NZ_CP075116.1 RefSeq gene 739588 741444 . + . ID=gene-CCO40_RS03565;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=CCO40_RS03565;old_locus_tag=CCO40_03565 NZ_CP075116.1 Protein Homology CDS 739588 741444 . + 0 ID=cds-WP_000033690.1;Parent=gene-CCO40_RS03565;Dbxref=GenBank:WP_000033690.1;Name=WP_000033690.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462054.1;locus_tag=CCO40_RS03565;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_000033690.1;transl_table=11 NZ_CP075116.1 RefSeq gene 742114 743172 . + . ID=gene-CCO40_RS03570;Name=CCO40_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03570;old_locus_tag=CCO40_03570 NZ_CP075116.1 Protein Homology CDS 742114 743172 . + 0 ID=cds-WP_000475246.1;Parent=gene-CCO40_RS03570;Dbxref=GenBank:WP_000475246.1;Name=WP_000475246.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA,zinc ion binding|0008270||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462053.1;locus_tag=CCO40_RS03570;product=methyl-accepting chemotaxis protein;protein_id=WP_000475246.1;transl_table=11 NZ_CP075116.1 RefSeq gene 743472 744884 . - . ID=gene-CCO40_RS03575;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=CCO40_RS03575;old_locus_tag=CCO40_03575 NZ_CP075116.1 Protein Homology CDS 743472 744884 . - 0 ID=cds-WP_000190177.1;Parent=gene-CCO40_RS03575;Dbxref=GenBank:WP_000190177.1;Name=WP_000190177.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462052.1;locus_tag=CCO40_RS03575;product=glucuronate isomerase;protein_id=WP_000190177.1;transl_table=11 NZ_CP075116.1 RefSeq gene 744896 746368 . - . ID=gene-CCO40_RS03580;Name=CCO40_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03580;old_locus_tag=CCO40_03580 NZ_CP075116.1 Protein Homology CDS 744896 746368 . - 0 ID=cds-WP_045717477.1;Parent=gene-CCO40_RS03580;Dbxref=GenBank:WP_045717477.1;Name=WP_045717477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462051.1;locus_tag=CCO40_RS03580;product=fructuronate reductase;protein_id=WP_045717477.1;transl_table=11 NZ_CP075116.1 RefSeq gene 746479 747663 . - . ID=gene-CCO40_RS03585;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=CCO40_RS03585;old_locus_tag=CCO40_03585 NZ_CP075116.1 Protein Homology CDS 746479 747663 . - 0 ID=cds-WP_000815487.1;Parent=gene-CCO40_RS03585;Dbxref=GenBank:WP_000815487.1;Name=WP_000815487.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462050.1;locus_tag=CCO40_RS03585;product=mannonate dehydratase;protein_id=WP_000815487.1;transl_table=11 NZ_CP075116.1 RefSeq gene 748068 749372 . + . ID=gene-CCO40_RS03590;Name=CCO40_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03590;old_locus_tag=CCO40_03590 NZ_CP075116.1 Protein Homology CDS 748068 749372 . + 0 ID=cds-WP_000784371.1;Parent=gene-CCO40_RS03590;Dbxref=GenBank:WP_000784371.1;Name=WP_000784371.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462049.1;locus_tag=CCO40_RS03590;product=MFS transporter;protein_id=WP_000784371.1;transl_table=11 NZ_CP075116.1 RefSeq gene 749768 750646 . + . ID=gene-CCO40_RS03595;Name=CCO40_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03595;old_locus_tag=CCO40_03595 NZ_CP075116.1 Protein Homology CDS 749768 750646 . + 0 ID=cds-WP_000089255.1;Parent=gene-CCO40_RS03595;Dbxref=GenBank:WP_000089255.1;Name=WP_000089255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462048.1;locus_tag=CCO40_RS03595;product=carbon-nitrogen hydrolase family protein;protein_id=WP_000089255.1;transl_table=11 NZ_CP075116.1 RefSeq gene 750685 751608 . + . ID=gene-CCO40_RS03600;Name=CCO40_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03600;old_locus_tag=CCO40_03600 NZ_CP075116.1 Protein Homology CDS 750685 751608 . + 0 ID=cds-WP_000540889.1;Parent=gene-CCO40_RS03600;Dbxref=GenBank:WP_000540889.1;Name=WP_000540889.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462047.1;locus_tag=CCO40_RS03600;product=polysaccharide deacetylase family protein;protein_id=WP_000540889.1;transl_table=11 NZ_CP075116.1 RefSeq gene 752334 752819 . + . ID=gene-CCO40_RS03605;Name=CCO40_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03605;old_locus_tag=CCO40_03605 NZ_CP075116.1 Protein Homology CDS 752334 752819 . + 0 ID=cds-WP_000338753.1;Parent=gene-CCO40_RS03605;Dbxref=GenBank:WP_000338753.1;Name=WP_000338753.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462046.1;locus_tag=CCO40_RS03605;product=Hcp family type VI secretion system effector;protein_id=WP_000338753.1;transl_table=11 NZ_CP075116.1 RefSeq gene 752819 753199 . + . ID=gene-CCO40_RS03610;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=CCO40_RS03610;old_locus_tag=CCO40_03610 NZ_CP075116.1 Protein Homology CDS 752819 753199 . + 0 ID=cds-WP_000988938.1;Parent=gene-CCO40_RS03610;Dbxref=GenBank:WP_000988938.1;Name=WP_000988938.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462045.1;locus_tag=CCO40_RS03610;product=anti-adapter protein IraD;protein_id=WP_000988938.1;transl_table=11 NZ_CP075116.1 RefSeq gene 753335 754819 . - . ID=gene-CCO40_RS03615;Name=CCO40_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03615;old_locus_tag=CCO40_03615 NZ_CP075116.1 Protein Homology CDS 753335 754819 . - 0 ID=cds-WP_094889072.1;Parent=gene-CCO40_RS03615;Dbxref=GenBank:WP_094889072.1;Name=WP_094889072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=CCO40_RS03615;product=NAD-dependent phenylacetaldehyde dehydrogenase;protein_id=WP_094889072.1;transl_table=11 NZ_CP075116.1 RefSeq gene 754981 756282 . + . ID=gene-CCO40_RS03620;Name=CCO40_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03620;old_locus_tag=CCO40_03620 NZ_CP075116.1 Protein Homology CDS 754981 756282 . + 0 ID=cds-WP_001092825.1;Parent=gene-CCO40_RS03620;Dbxref=GenBank:WP_001092825.1;Name=WP_001092825.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462043.1;locus_tag=CCO40_RS03620;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_001092825.1;transl_table=11 NZ_CP075116.1 RefSeq gene 756297 756671 . + . ID=gene-CCO40_RS03625;Name=CCO40_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03625;old_locus_tag=CCO40_03625 NZ_CP075116.1 Protein Homology CDS 756297 756671 . + 0 ID=cds-WP_000542979.1;Parent=gene-CCO40_RS03625;Dbxref=GenBank:WP_000542979.1;Name=WP_000542979.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462042.1;locus_tag=CCO40_RS03625;product=cupin domain-containing protein;protein_id=WP_000542979.1;transl_table=11 NZ_CP075116.1 RefSeq gene 756880 758379 . + . ID=gene-CCO40_RS03630;Name=CCO40_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03630;old_locus_tag=CCO40_03630 NZ_CP075116.1 Protein Homology CDS 756880 758379 . + 0 ID=cds-WP_000475960.1;Parent=gene-CCO40_RS03630;Dbxref=GenBank:WP_000475960.1;Name=WP_000475960.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462041.1;locus_tag=CCO40_RS03630;product=APC family permease;protein_id=WP_000475960.1;transl_table=11 NZ_CP075116.1 RefSeq gene 758357 758914 . + . ID=gene-CCO40_RS03635;Name=CCO40_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03635;old_locus_tag=CCO40_03635 NZ_CP075116.1 Protein Homology CDS 758357 758914 . + 0 ID=cds-WP_000100112.1;Parent=gene-CCO40_RS03635;Dbxref=GenBank:WP_000100112.1;Name=WP_000100112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=CCO40_RS03635;product=DUF3156 family protein;protein_id=WP_000100112.1;transl_table=11 NZ_CP075116.1 RefSeq gene 759018 759701 . - . ID=gene-CCO40_RS03640;Name=CCO40_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03640;old_locus_tag=CCO40_03640 NZ_CP075116.1 Protein Homology CDS 759018 759701 . - 0 ID=cds-WP_001275355.1;Parent=gene-CCO40_RS03640;Dbxref=GenBank:WP_001275355.1;Name=WP_001275355.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462039.1;locus_tag=CCO40_RS03640;product=helix-turn-helix transcriptional regulator;protein_id=WP_001275355.1;transl_table=11 NZ_CP075116.1 RefSeq gene 760213 761397 . + . ID=gene-CCO40_RS03645;Name=CCO40_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03645;old_locus_tag=CCO40_03645 NZ_CP075116.1 Protein Homology CDS 760213 761397 . + 0 ID=cds-WP_000933432.1;Parent=gene-CCO40_RS03645;Dbxref=GenBank:WP_000933432.1;Name=WP_000933432.1;Ontology_term=GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462038.1;locus_tag=CCO40_RS03645;product=anaerobic sulfatase maturase;protein_id=WP_000933432.1;transl_table=11 NZ_CP075116.1 RefSeq gene 761466 763205 . + . ID=gene-CCO40_RS03650;Name=CCO40_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03650;old_locus_tag=CCO40_03650 NZ_CP075116.1 Protein Homology CDS 761466 763205 . + 0 ID=cds-WP_000712459.1;Parent=gene-CCO40_RS03650;Dbxref=GenBank:WP_000712459.1;Name=WP_000712459.1;Ontology_term=GO:0004065,GO:0008081,GO:0046872;gbkey=CDS;go_function=arylsulfatase activity|0004065||IEA,phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462037.1;locus_tag=CCO40_RS03650;product=arylsulfatase;protein_id=WP_000712459.1;transl_table=11 NZ_CP075116.1 RefSeq gene 763253 764131 . - . ID=gene-CCO40_RS03655;Name=ripR;gbkey=Gene;gene=ripR;gene_biotype=protein_coding;locus_tag=CCO40_RS03655;old_locus_tag=CCO40_03655 NZ_CP075116.1 Protein Homology CDS 763253 764131 . - 0 ID=cds-WP_000423170.1;Parent=gene-CCO40_RS03655;Dbxref=GenBank:WP_000423170.1;Name=WP_000423170.1;gbkey=CDS;gene=ripR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462036.1;locus_tag=CCO40_RS03655;product=itaconate degradation transcriptional regulator RipR;protein_id=WP_000423170.1;transl_table=11 NZ_CP075116.1 RefSeq gene 764223 765065 . + . ID=gene-CCO40_RS03660;Name=ripC;gbkey=Gene;gene=ripC;gene_biotype=protein_coding;locus_tag=CCO40_RS03660;old_locus_tag=CCO40_03660 NZ_CP075116.1 Protein Homology CDS 764223 765065 . + 0 ID=cds-WP_001112897.1;Parent=gene-CCO40_RS03660;Dbxref=GenBank:WP_001112897.1;Name=WP_001112897.1;Note=Third step in itaconate degradation.;gbkey=CDS;gene=ripC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462035.1;locus_tag=CCO40_RS03660;product=itaconate degradation C-C-lyase RipC;protein_id=WP_001112897.1;transl_table=11 NZ_CP075116.1 RefSeq gene 765089 765616 . + . ID=gene-CCO40_RS03665;Name=ripB;gbkey=Gene;gene=ripB;gene_biotype=protein_coding;locus_tag=CCO40_RS03665;old_locus_tag=CCO40_03665 NZ_CP075116.1 Protein Homology CDS 765089 765616 . + 0 ID=cds-WP_001094307.1;Parent=gene-CCO40_RS03665;Dbxref=GenBank:WP_001094307.1;Name=WP_001094307.1;Note=Second step in itaconate degradation.;gbkey=CDS;gene=ripB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462034.1;locus_tag=CCO40_RS03665;product=(R)-specific enoyl-CoA hydratase RipB/Ich;protein_id=WP_001094307.1;transl_table=11 NZ_CP075116.1 RefSeq gene 765641 766966 . + . ID=gene-CCO40_RS03670;Name=ripA;gbkey=Gene;gene=ripA;gene_biotype=protein_coding;gene_synonym=ict;locus_tag=CCO40_RS03670;old_locus_tag=CCO40_03670 NZ_CP075116.1 Protein Homology CDS 765641 766966 . + 0 ID=cds-WP_000982337.1;Parent=gene-CCO40_RS03670;Dbxref=GenBank:WP_000982337.1;Name=WP_000982337.1;Note=Transfers CoA from succinate to itaconate;gbkey=CDS;gene=ripA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462033.1;locus_tag=CCO40_RS03670;product=itaconate CoA-transferase RipA/Ict;protein_id=WP_000982337.1;transl_table=11 NZ_CP075116.1 RefSeq gene 767031 767411 . + . ID=gene-CCO40_RS03675;Name=CCO40_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03675;old_locus_tag=CCO40_03675 NZ_CP075116.1 Protein Homology CDS 767031 767411 . + 0 ID=cds-WP_000582672.1;Parent=gene-CCO40_RS03675;Dbxref=GenBank:WP_000582672.1;Name=WP_000582672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582669.1;locus_tag=CCO40_RS03675;product=VOC family protein;protein_id=WP_000582672.1;transl_table=11 NZ_CP075116.1 RefSeq gene 767570 767645 . - . ID=gene-CCO40_RS03680;Name=CCO40_RS03680;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS03680;old_locus_tag=CCO40_03680 NZ_CP075116.1 tRNAscan-SE tRNA 767570 767645 . - . ID=rna-CCO40_RS03680;Parent=gene-CCO40_RS03680;anticodon=(pos:complement(767610..767612));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS03680;product=tRNA-Phe NZ_CP075116.1 tRNAscan-SE exon 767570 767645 . - . ID=exon-CCO40_RS03680-1;Parent=rna-CCO40_RS03680;anticodon=(pos:complement(767610..767612));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS03680;product=tRNA-Phe NZ_CP075116.1 RefSeq gene 767751 768458 . - . ID=gene-CCO40_RS03685;Name=CCO40_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03685;old_locus_tag=CCO40_03685 NZ_CP075116.1 Protein Homology CDS 767751 768458 . - 0 ID=cds-WP_000234466.1;Parent=gene-CCO40_RS03685;Dbxref=GenBank:WP_000234466.1;Name=WP_000234466.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462031.1;locus_tag=CCO40_RS03685;product=DUF554 domain-containing protein;protein_id=WP_000234466.1;transl_table=11 NZ_CP075116.1 RefSeq gene 768883 771018 . + . ID=gene-CCO40_RS03690;Name=CCO40_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03690;old_locus_tag=CCO40_03690 NZ_CP075116.1 Protein Homology CDS 768883 771018 . + 0 ID=cds-WP_080219025.1;Parent=gene-CCO40_RS03690;Dbxref=GenBank:WP_080219025.1;Name=WP_080219025.1;Ontology_term=GO:0006596,GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;go_process=polyamine biosynthetic process|0006596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=CCO40_RS03690;product=ornithine decarboxylase;protein_id=WP_080219025.1;transl_table=11 NZ_CP075116.1 RefSeq gene 771080 772336 . - . ID=gene-CCO40_RS03695;Name=CCO40_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03695;old_locus_tag=CCO40_03695 NZ_CP075116.1 Protein Homology CDS 771080 772336 . - 0 ID=cds-WP_001049804.1;Parent=gene-CCO40_RS03695;Dbxref=GenBank:WP_001049804.1;Name=WP_001049804.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=CCO40_RS03695;product=nucleoside permease;protein_id=WP_001049804.1;transl_table=11 NZ_CP075116.1 RefSeq gene 772553 773638 . - . ID=gene-CCO40_RS03700;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=CCO40_RS03700;old_locus_tag=CCO40_03700 NZ_CP075116.1 Protein Homology CDS 772553 773638 . - 0 ID=cds-WP_000976289.1;Parent=gene-CCO40_RS03700;Dbxref=GenBank:WP_000976289.1;Name=WP_000976289.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462028.1;locus_tag=CCO40_RS03700;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_000976289.1;transl_table=11 NZ_CP075116.1 RefSeq gene 773751 774026 . - . ID=gene-CCO40_RS03705;Name=CCO40_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03705;old_locus_tag=CCO40_03705 NZ_CP075116.1 Protein Homology CDS 773751 774026 . - 0 ID=cds-WP_000091706.1;Parent=gene-CCO40_RS03705;Dbxref=GenBank:WP_000091706.1;Name=WP_000091706.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462027.1;locus_tag=CCO40_RS03705;product=oxidative damage protection protein;protein_id=WP_000091706.1;transl_table=11 NZ_CP075116.1 RefSeq gene 774054 775106 . - . ID=gene-CCO40_RS03710;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=CCO40_RS03710;old_locus_tag=CCO40_03710 NZ_CP075116.1 Protein Homology CDS 774054 775106 . - 0 ID=cds-WP_001148948.1;Parent=gene-CCO40_RS03710;Dbxref=GenBank:WP_001148948.1;Name=WP_001148948.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462026.1;locus_tag=CCO40_RS03710;product=A/G-specific adenine glycosylase;protein_id=WP_001148948.1;transl_table=11 NZ_CP075116.1 RefSeq gene 775261 775980 . + . ID=gene-CCO40_RS03715;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=CCO40_RS03715;old_locus_tag=CCO40_03715 NZ_CP075116.1 Protein Homology CDS 775261 775980 . + 0 ID=cds-WP_000786894.1;Parent=gene-CCO40_RS03715;Dbxref=GenBank:WP_000786894.1;Name=WP_000786894.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=CCO40_RS03715;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786894.1;transl_table=11 NZ_CP075116.1 RefSeq gene 775980 776306 . + . ID=gene-CCO40_RS03720;Name=CCO40_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03720;old_locus_tag=CCO40_03720 NZ_CP075116.1 Protein Homology CDS 775980 776306 . + 0 ID=cds-WP_001107574.1;Parent=gene-CCO40_RS03720;Dbxref=GenBank:WP_001107574.1;Name=WP_001107574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462024.1;locus_tag=CCO40_RS03720;product=YggL family protein;protein_id=WP_001107574.1;transl_table=11 NZ_CP075116.1 RefSeq gene 776356 777075 . + . ID=gene-CCO40_RS03725;Name=CCO40_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03725;old_locus_tag=CCO40_03725 NZ_CP075116.1 Protein Homology CDS 776356 777075 . + 0 ID=cds-WP_000984838.1;Parent=gene-CCO40_RS03725;Dbxref=GenBank:WP_000984838.1;Name=WP_000984838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462023.1;locus_tag=CCO40_RS03725;product=YggN family protein;protein_id=WP_000984838.1;transl_table=11 NZ_CP075116.1 RefSeq gene 777264 778310 . + . ID=gene-CCO40_RS03730;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=CCO40_RS03730;old_locus_tag=CCO40_03730 NZ_CP075116.1 Protein Homology CDS 777264 778310 . + 0 ID=cds-WP_000394188.1;Parent=gene-CCO40_RS03730;Dbxref=GenBank:WP_000394188.1;Name=WP_000394188.1;Ontology_term=GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462022.1;locus_tag=CCO40_RS03730;product=L-asparaginase 2;protein_id=WP_000394188.1;transl_table=11 NZ_CP075116.1 RefSeq gene 778443 779450 . + . ID=gene-CCO40_RS03735;Name=CCO40_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03735;old_locus_tag=CCO40_03735 NZ_CP075116.1 Protein Homology CDS 778443 779450 . + 0 ID=cds-WP_000252187.1;Parent=gene-CCO40_RS03735;Dbxref=GenBank:WP_000252187.1;Name=WP_000252187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462021.1;locus_tag=CCO40_RS03735;product=DUF1202 domain-containing protein;protein_id=WP_000252187.1;transl_table=11 NZ_CP075116.1 RefSeq gene 779541 780677 . - . ID=gene-CCO40_RS03740;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=CCO40_RS03740;old_locus_tag=CCO40_03740 NZ_CP075116.1 Protein Homology CDS 779541 780677 . - 0 ID=cds-WP_001096521.1;Parent=gene-CCO40_RS03740;Dbxref=GenBank:WP_001096521.1;Name=WP_001096521.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462020.1;locus_tag=CCO40_RS03740;product=radical SAM family heme chaperone HemW;protein_id=WP_001096521.1;transl_table=11 NZ_CP075116.1 RefSeq gene 780670 781263 . - . ID=gene-CCO40_RS03745;Name=CCO40_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03745;old_locus_tag=CCO40_03745 NZ_CP075116.1 Protein Homology CDS 780670 781263 . - 0 ID=cds-WP_001174769.1;Parent=gene-CCO40_RS03745;Dbxref=GenBank:WP_001174769.1;Name=WP_001174769.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462019.1;locus_tag=CCO40_RS03745;product=XTP/dITP diphosphatase;protein_id=WP_001174769.1;transl_table=11 NZ_CP075116.1 RefSeq gene 781271 781561 . - . ID=gene-CCO40_RS03750;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=CCO40_RS03750;old_locus_tag=CCO40_03750 NZ_CP075116.1 Protein Homology CDS 781271 781561 . - 0 ID=cds-WP_001277205.1;Parent=gene-CCO40_RS03750;Dbxref=GenBank:WP_001277205.1;Name=WP_001277205.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462018.1;locus_tag=CCO40_RS03750;product=DUF167 family protein YggU;protein_id=WP_001277205.1;transl_table=11 NZ_CP075116.1 RefSeq gene 781558 782124 . - . ID=gene-CCO40_RS03755;Name=CCO40_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03755;old_locus_tag=CCO40_03755 NZ_CP075116.1 Protein Homology CDS 781558 782124 . - 0 ID=cds-WP_001094848.1;Parent=gene-CCO40_RS03755;Dbxref=GenBank:WP_001094848.1;Name=WP_001094848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=CCO40_RS03755;product=YggT family protein;protein_id=WP_001094848.1;transl_table=11 NZ_CP075116.1 RefSeq gene 782143 782847 . - . ID=gene-CCO40_RS03760;Name=CCO40_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03760;old_locus_tag=CCO40_03760 NZ_CP075116.1 Protein Homology CDS 782143 782847 . - 0 ID=cds-WP_000997812.1;Parent=gene-CCO40_RS03760;Dbxref=GenBank:WP_000997812.1;Name=WP_000997812.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462016.1;locus_tag=CCO40_RS03760;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_000997812.1;transl_table=11 NZ_CP075116.1 RefSeq gene 782865 783845 . + . ID=gene-CCO40_RS03765;Name=CCO40_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03765;old_locus_tag=CCO40_03765 NZ_CP075116.1 Protein Homology CDS 782865 783845 . + 0 ID=cds-WP_001055659.1;Parent=gene-CCO40_RS03765;Dbxref=GenBank:WP_001055659.1;Name=WP_001055659.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462015.1;locus_tag=CCO40_RS03765;product=type IV pilus twitching motility protein PilT;protein_id=WP_001055659.1;transl_table=11 NZ_CP075116.1 RefSeq gene 783978 784664 . + . ID=gene-CCO40_RS03770;Name=CCO40_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03770;old_locus_tag=CCO40_03770 NZ_CP075116.1 Protein Homology CDS 783978 784664 . + 0 ID=cds-WP_000098322.1;Parent=gene-CCO40_RS03770;Dbxref=GenBank:WP_000098322.1;Name=WP_000098322.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462014.1;locus_tag=CCO40_RS03770;product=IclR family transcriptional regulator;protein_id=WP_000098322.1;transl_table=11 NZ_CP075116.1 RefSeq gene 784711 785127 . - . ID=gene-CCO40_RS03775;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=CCO40_RS03775;old_locus_tag=CCO40_03775 NZ_CP075116.1 Protein Homology CDS 784711 785127 . - 0 ID=cds-WP_001285491.1;Parent=gene-CCO40_RS03775;Dbxref=GenBank:WP_001285491.1;Name=WP_001285491.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462013.1;locus_tag=CCO40_RS03775;product=Holliday junction resolvase RuvX;protein_id=WP_001285491.1;transl_table=11 NZ_CP075116.1 RefSeq gene 785127 785690 . - . ID=gene-CCO40_RS03780;Name=CCO40_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03780;old_locus_tag=CCO40_03780 NZ_CP075116.1 Protein Homology CDS 785127 785690 . - 0 ID=cds-WP_001053173.1;Parent=gene-CCO40_RS03780;Dbxref=GenBank:WP_001053173.1;Name=WP_001053173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=CCO40_RS03780;product=YqgE/AlgH family protein;protein_id=WP_001053173.1;transl_table=11 NZ_CP075116.1 RefSeq gene 785906 786853 . - . ID=gene-CCO40_RS03785;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=CCO40_RS03785;old_locus_tag=CCO40_03785 NZ_CP075116.1 Protein Homology CDS 785906 786853 . - 0 ID=cds-WP_000593248.1;Parent=gene-CCO40_RS03785;Dbxref=GenBank:WP_000593248.1;Name=WP_000593248.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=CCO40_RS03785;product=glutathione synthase;protein_id=WP_000593248.1;transl_table=11 NZ_CP075116.1 RefSeq gene 786873 787604 . - . ID=gene-CCO40_RS03790;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=CCO40_RS03790;old_locus_tag=CCO40_03790 NZ_CP075116.1 Protein Homology CDS 786873 787604 . - 0 ID=cds-WP_001675718.1;Parent=gene-CCO40_RS03790;Dbxref=GenBank:WP_001675718.1;Name=WP_001675718.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=CCO40_RS03790;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001675718.1;transl_table=11 NZ_CP075116.1 RefSeq gene 787681 788388 . - . ID=gene-CCO40_RS03795;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=CCO40_RS03795;old_locus_tag=CCO40_03795 NZ_CP075116.1 Protein Homology CDS 787681 788388 . - 0 ID=cds-WP_000286122.1;Parent=gene-CCO40_RS03795;Dbxref=GenBank:WP_000286122.1;Name=WP_000286122.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462009.1;locus_tag=CCO40_RS03795;product=deoxyribonuclease I;protein_id=WP_000286122.1;transl_table=11 NZ_CP075116.1 RefSeq gene 788484 788981 . - . ID=gene-CCO40_RS03800;Name=CCO40_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03800;old_locus_tag=CCO40_03800 NZ_CP075116.1 Protein Homology CDS 788484 788981 . - 0 ID=cds-WP_000856775.1;Parent=gene-CCO40_RS03800;Dbxref=GenBank:WP_000856775.1;Name=WP_000856775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462008.1;locus_tag=CCO40_RS03800;product=SprT family zinc-dependent metalloprotease;protein_id=WP_000856775.1;transl_table=11 NZ_CP075116.1 RefSeq gene 789060 790454 . - . ID=gene-CCO40_RS03805;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=CCO40_RS03805;old_locus_tag=CCO40_03805 NZ_CP075116.1 Protein Homology CDS 789060 790454 . - 0 ID=cds-WP_001113171.1;Parent=gene-CCO40_RS03805;Dbxref=GenBank:WP_001113171.1;Name=WP_001113171.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462007.1;locus_tag=CCO40_RS03805;product=galactose/proton symporter;protein_id=WP_001113171.1;transl_table=11 NZ_CP075116.1 RefSeq gene 790947 792101 . - . ID=gene-CCO40_RS03810;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=CCO40_RS03810;old_locus_tag=CCO40_03810 NZ_CP075116.1 Protein Homology CDS 790947 792101 . - 0 ID=cds-WP_001062140.1;Parent=gene-CCO40_RS03810;Dbxref=GenBank:WP_001062140.1;Name=WP_001062140.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=CCO40_RS03810;product=methionine adenosyltransferase;protein_id=WP_001062140.1;transl_table=11 NZ_CP075116.1 RefSeq gene 792157 792456 . + . ID=gene-CCO40_RS03815;Name=CCO40_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03815;old_locus_tag=CCO40_03815 NZ_CP075116.1 GeneMarkS-2+ CDS 792157 792456 . + 0 ID=cds-WP_015675611.1;Parent=gene-CCO40_RS03815;Dbxref=GenBank:WP_015675611.1;Name=WP_015675611.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO40_RS03815;product=hypothetical protein;protein_id=WP_015675611.1;transl_table=11 NZ_CP075116.1 RefSeq gene 792516 792665 . + . ID=gene-CCO40_RS22610;Name=yqgG;gbkey=Gene;gene=yqgG;gene_biotype=protein_coding;locus_tag=CCO40_RS22610 NZ_CP075116.1 Protein Homology CDS 792516 792665 . + 0 ID=cds-WP_001751809.1;Parent=gene-CCO40_RS22610;Dbxref=GenBank:WP_001751809.1;Name=WP_001751809.1;gbkey=CDS;gene=yqgG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=CCO40_RS22610;product=small protein YqgG;protein_id=WP_001751809.1;transl_table=11 NZ_CP075116.1 RefSeq gene 792751 792882 . + . ID=gene-CCO40_RS03825;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=CCO40_RS03825;old_locus_tag=CCO40_03825 NZ_CP075116.1 Protein Homology CDS 792751 792882 . + 0 ID=cds-WP_000729109.1;Parent=gene-CCO40_RS03825;Dbxref=GenBank:WP_000729109.1;Name=WP_000729109.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462003.1;locus_tag=CCO40_RS03825;product=acid stress response protein YqgB;protein_id=WP_000729109.1;transl_table=11 NZ_CP075116.1 RefSeq gene 792891 794867 . + . ID=gene-CCO40_RS03830;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=CCO40_RS03830;old_locus_tag=CCO40_03830 NZ_CP075116.1 Protein Homology CDS 792891 794867 . + 0 ID=cds-WP_001278580.1;Parent=gene-CCO40_RS03830;Dbxref=GenBank:WP_001278580.1;Name=WP_001278580.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462002.1;locus_tag=CCO40_RS03830;product=biosynthetic arginine decarboxylase;protein_id=WP_001278580.1;transl_table=11 NZ_CP075116.1 RefSeq gene 795011 795742 . + . ID=gene-CCO40_RS03835;Name=CCO40_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03835;old_locus_tag=CCO40_03835 NZ_CP075116.1 Protein Homology CDS 795011 795742 . + 0 ID=cds-WP_000032789.1;Parent=gene-CCO40_RS03835;Dbxref=GenBank:WP_000032789.1;Name=WP_000032789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462001.1;locus_tag=CCO40_RS03835;product=hypothetical protein;protein_id=WP_000032789.1;transl_table=11 NZ_CP075116.1 RefSeq gene 795896 796696 . + . ID=gene-CCO40_RS03840;Name=CCO40_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03840;old_locus_tag=CCO40_03840 NZ_CP075116.1 Protein Homology CDS 795896 796696 . + 0 ID=cds-WP_001576357.1;Parent=gene-CCO40_RS03840;Dbxref=GenBank:WP_001576357.1;Name=WP_001576357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462000.3;locus_tag=CCO40_RS03840;product=FadR/GntR family transcriptional regulator;protein_id=WP_001576357.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 797011 797301 . - . ID=gene-CCO40_RS22615;Name=CCO40_RS22615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22615;pseudo=true NZ_CP075116.1 Protein Homology CDS 797011 797301 . - 0 ID=cds-CCO40_RS22615;Parent=gene-CCO40_RS22615;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014766.7;locus_tag=CCO40_RS22615;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 797929 799401 . + . ID=gene-CCO40_RS03850;Name=CCO40_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03850;old_locus_tag=CCO40_03850 NZ_CP075116.1 Protein Homology CDS 797929 799401 . + 0 ID=cds-WP_094889073.1;Parent=gene-CCO40_RS03850;Dbxref=GenBank:WP_094889073.1;Name=WP_094889073.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461999.1;locus_tag=CCO40_RS03850;product=mannitol dehydrogenase family protein;protein_id=WP_094889073.1;transl_table=11 NZ_CP075116.1 RefSeq gene 799404 800420 . + . ID=gene-CCO40_RS03855;Name=CCO40_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03855;old_locus_tag=CCO40_03855 NZ_CP075116.1 Protein Homology CDS 799404 800420 . + 0 ID=cds-WP_000853913.1;Parent=gene-CCO40_RS03855;Dbxref=GenBank:WP_000853913.1;Name=WP_000853913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461998.1;locus_tag=CCO40_RS03855;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_000853913.1;transl_table=11 NZ_CP075116.1 RefSeq gene 800434 801441 . + . ID=gene-CCO40_RS03860;Name=CCO40_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03860;old_locus_tag=CCO40_03860 NZ_CP075116.1 Protein Homology CDS 800434 801441 . + 0 ID=cds-WP_000104231.1;Parent=gene-CCO40_RS03860;Dbxref=GenBank:WP_000104231.1;Name=WP_000104231.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461997.1;locus_tag=CCO40_RS03860;product=Ldh family oxidoreductase;protein_id=WP_000104231.1;transl_table=11 NZ_CP075116.1 RefSeq gene 801480 801974 . + . ID=gene-CCO40_RS03865;Name=CCO40_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03865;old_locus_tag=CCO40_03865 NZ_CP075116.1 Protein Homology CDS 801480 801974 . + 0 ID=cds-WP_000965540.1;Parent=gene-CCO40_RS03865;Dbxref=GenBank:WP_000965540.1;Name=WP_000965540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001839091.1;locus_tag=CCO40_RS03865;product=NanQ anomerase/TabA/YiaL family protein;protein_id=WP_000965540.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 802167 802858 . + . ID=gene-CCO40_RS03870;Name=CCO40_RS03870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS03870;old_locus_tag=CCO40_03870;pseudo=true NZ_CP075116.1 Protein Homology CDS 802167 802858 . + 0 ID=cds-CCO40_RS03870;Parent=gene-CCO40_RS03870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461995.3;locus_tag=CCO40_RS03870;product=alpha/beta fold hydrolase;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 803063 803983 . + . ID=gene-CCO40_RS03875;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=CCO40_RS03875;old_locus_tag=CCO40_03875 NZ_CP075116.1 Protein Homology CDS 803063 803983 . + 0 ID=cds-WP_000105550.1;Parent=gene-CCO40_RS03875;Dbxref=GenBank:WP_000105550.1;Name=WP_000105550.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461994.1;locus_tag=CCO40_RS03875;product=agmatinase;protein_id=WP_000105550.1;transl_table=11 NZ_CP075116.1 RefSeq gene 804084 804842 . - . ID=gene-CCO40_RS03880;Name=loiP;gbkey=Gene;gene=loiP;gene_biotype=protein_coding;locus_tag=CCO40_RS03880;old_locus_tag=CCO40_03880 NZ_CP075116.1 Protein Homology CDS 804084 804842 . - 0 ID=cds-WP_000701830.1;Parent=gene-CCO40_RS03880;Dbxref=GenBank:WP_000701830.1;Name=WP_000701830.1;Ontology_term=GO:0004222;gbkey=CDS;gene=loiP;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=CCO40_RS03880;product=metalloprotease LoiP;protein_id=WP_000701830.1;transl_table=11 NZ_CP075116.1 RefSeq gene 805118 807109 . + . ID=gene-CCO40_RS03885;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=CCO40_RS03885;old_locus_tag=CCO40_03885 NZ_CP075116.1 Protein Homology CDS 805118 807109 . + 0 ID=cds-WP_023193721.1;Parent=gene-CCO40_RS03885;Dbxref=GenBank:WP_023193721.1;Name=WP_023193721.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461992.1;locus_tag=CCO40_RS03885;product=transketolase;protein_id=WP_023193721.1;transl_table=11 NZ_CP075116.1 RefSeq gene 807153 807809 . - . ID=gene-CCO40_RS03890;Name=CCO40_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03890;old_locus_tag=CCO40_03890 NZ_CP075116.1 Protein Homology CDS 807153 807809 . - 0 ID=cds-WP_094889074.1;Parent=gene-CCO40_RS03890;Dbxref=GenBank:WP_094889074.1;Name=WP_094889074.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461991.1;locus_tag=CCO40_RS03890;product=ABC transporter ATP-binding protein;protein_id=WP_094889074.1;transl_table=11 NZ_CP075116.1 RefSeq gene 807803 808480 . - . ID=gene-CCO40_RS03895;Name=CCO40_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03895;old_locus_tag=CCO40_03895 NZ_CP075116.1 Protein Homology CDS 807803 808480 . - 0 ID=cds-WP_024151943.1;Parent=gene-CCO40_RS03895;Dbxref=GenBank:WP_024151943.1;Name=WP_024151943.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461990.1;locus_tag=CCO40_RS03895;product=ABC transporter ATP-binding protein;protein_id=WP_024151943.1;transl_table=11 NZ_CP075116.1 RefSeq gene 808468 809175 . - . ID=gene-CCO40_RS03900;Name=CCO40_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03900;old_locus_tag=CCO40_03900 NZ_CP075116.1 Protein Homology CDS 808468 809175 . - 0 ID=cds-WP_094889075.1;Parent=gene-CCO40_RS03900;Dbxref=GenBank:WP_094889075.1;Name=WP_094889075.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=CCO40_RS03900;product=energy-coupling factor transporter transmembrane component T;protein_id=WP_094889075.1;transl_table=11 NZ_CP075116.1 RefSeq gene 809176 809754 . - . ID=gene-CCO40_RS03905;Name=CCO40_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03905;old_locus_tag=CCO40_03905 NZ_CP075116.1 Protein Homology CDS 809176 809754 . - 0 ID=cds-WP_000124001.1;Parent=gene-CCO40_RS03905;Dbxref=GenBank:WP_000124001.1;Name=WP_000124001.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461988.1;locus_tag=CCO40_RS03905;product=ECF transporter S component;protein_id=WP_000124001.1;transl_table=11 NZ_CP075116.1 RefSeq gene 809780 810205 . - . ID=gene-CCO40_RS03910;Name=CCO40_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03910;old_locus_tag=CCO40_03910 NZ_CP075116.1 Protein Homology CDS 809780 810205 . - 0 ID=cds-WP_000218562.1;Parent=gene-CCO40_RS03910;Dbxref=GenBank:WP_000218562.1;Name=WP_000218562.1;Ontology_term=GO:0003680;gbkey=CDS;go_function=minor groove of adenine-thymine-rich DNA binding|0003680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461987.1;locus_tag=CCO40_RS03910;product=PPC domain-containing DNA-binding protein;protein_id=WP_000218562.1;transl_table=11 NZ_CP075116.1 RefSeq gene 810579 811625 . + . ID=gene-CCO40_RS03915;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=CCO40_RS03915;old_locus_tag=CCO40_03915 NZ_CP075116.1 Protein Homology CDS 810579 811625 . + 0 ID=cds-WP_000218338.1;Parent=gene-CCO40_RS03915;Dbxref=GenBank:WP_000218338.1;Name=WP_000218338.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase (NAD+) activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461986.1;locus_tag=CCO40_RS03915;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_000218338.1;transl_table=11 NZ_CP075116.1 RefSeq gene 811647 812810 . + . ID=gene-CCO40_RS03920;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=CCO40_RS03920;old_locus_tag=CCO40_03920 NZ_CP075116.1 Protein Homology CDS 811647 812810 . + 0 ID=cds-WP_000111274.1;Parent=gene-CCO40_RS03920;Dbxref=GenBank:WP_000111274.1;Name=WP_000111274.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=CCO40_RS03920;product=phosphoglycerate kinase;protein_id=WP_000111274.1;transl_table=11 NZ_CP075116.1 RefSeq gene 812912 813991 . + . ID=gene-CCO40_RS03925;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=CCO40_RS03925;old_locus_tag=CCO40_03925 NZ_CP075116.1 Protein Homology CDS 812912 813991 . + 0 ID=cds-WP_000034386.1;Parent=gene-CCO40_RS03925;Dbxref=GenBank:WP_000034386.1;Name=WP_000034386.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=CCO40_RS03925;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034386.1;transl_table=11 NZ_CP075116.1 RefSeq gene 814218 815078 . + . ID=gene-CCO40_RS03930;Name=CCO40_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03930;old_locus_tag=CCO40_03930 NZ_CP075116.1 Protein Homology CDS 814218 815078 . + 0 ID=cds-WP_000389833.1;Parent=gene-CCO40_RS03930;Dbxref=GenBank:WP_000389833.1;Name=WP_000389833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461983.1;locus_tag=CCO40_RS03930;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000389833.1;transl_table=11 NZ_CP075116.1 RefSeq gene 815279 815914 . + . ID=gene-CCO40_RS03935;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=CCO40_RS03935;old_locus_tag=CCO40_03935 NZ_CP075116.1 Protein Homology CDS 815279 815914 . + 0 ID=cds-WP_000626863.1;Parent=gene-CCO40_RS03935;Dbxref=GenBank:WP_000626863.1;Name=WP_000626863.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=CCO40_RS03935;product=arginine exporter ArgO;protein_id=WP_000626863.1;transl_table=11 NZ_CP075116.1 RefSeq gene 816008 816754 . + . ID=gene-CCO40_RS03940;Name=CCO40_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03940;old_locus_tag=CCO40_03940 NZ_CP075116.1 Protein Homology CDS 816008 816754 . + 0 ID=cds-WP_000669854.1;Parent=gene-CCO40_RS03940;Dbxref=GenBank:WP_000669854.1;Name=WP_000669854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461981.1;locus_tag=CCO40_RS03940;product=oxidative stress defense protein;protein_id=WP_000669854.1;transl_table=11 NZ_CP075116.1 RefSeq gene 817020 817913 . - . ID=gene-CCO40_RS03945;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=CCO40_RS03945;old_locus_tag=CCO40_03945 NZ_CP075116.1 Protein Homology CDS 817020 817913 . - 0 ID=cds-WP_000828345.1;Parent=gene-CCO40_RS03945;Dbxref=GenBank:WP_000828345.1;Name=WP_000828345.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461980.1;locus_tag=CCO40_RS03945;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828345.1;transl_table=11 NZ_CP075116.1 RefSeq gene 818067 818726 . + . ID=gene-CCO40_RS03950;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=CCO40_RS03950;old_locus_tag=CCO40_03950 NZ_CP075116.1 Protein Homology CDS 818067 818726 . + 0 ID=cds-WP_000189741.1;Parent=gene-CCO40_RS03950;Dbxref=GenBank:WP_000189741.1;Name=WP_000189741.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461979.1;locus_tag=CCO40_RS03950;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000189741.1;transl_table=11 NZ_CP075116.1 RefSeq gene 818993 820225 . + . ID=gene-CCO40_RS03955;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=CCO40_RS03955;old_locus_tag=CCO40_03955 NZ_CP075116.1 Protein Homology CDS 818993 820225 . + 0 ID=cds-WP_001151627.1;Parent=gene-CCO40_RS03955;Dbxref=GenBank:WP_001151627.1;Name=WP_001151627.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=CCO40_RS03955;product=phosphoglycerate dehydrogenase;protein_id=WP_001151627.1;transl_table=11 NZ_CP075116.1 RefSeq gene 820607 821203 . - . ID=gene-CCO40_RS03960;Name=CCO40_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03960;old_locus_tag=CCO40_03960 NZ_CP075116.1 Protein Homology CDS 820607 821203 . - 0 ID=cds-WP_031604965.1;Parent=gene-CCO40_RS03960;Dbxref=GenBank:WP_031604965.1;Name=WP_031604965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=CCO40_RS03960;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_031604965.1;transl_table=11 NZ_CP075116.1 RefSeq gene 821224 821407 . - . ID=gene-CCO40_RS03965;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=CCO40_RS03965;old_locus_tag=CCO40_03965 NZ_CP075116.1 cmsearch ncRNA 821224 821407 . - . ID=rna-CCO40_RS03965;Parent=gene-CCO40_RS03965;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00013,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS03965;product=6S RNA NZ_CP075116.1 cmsearch exon 821224 821407 . - . ID=exon-CCO40_RS03965-1;Parent=rna-CCO40_RS03965;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00013,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS03965;product=6S RNA NZ_CP075116.1 RefSeq gene 821449 821778 . - . ID=gene-CCO40_RS03970;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=CCO40_RS03970;old_locus_tag=CCO40_03970 NZ_CP075116.1 Protein Homology CDS 821449 821778 . - 0 ID=cds-WP_001276011.1;Parent=gene-CCO40_RS03970;Dbxref=GenBank:WP_001276011.1;Name=WP_001276011.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=CCO40_RS03970;product=cell division protein ZapA;protein_id=WP_001276011.1;transl_table=11 NZ_CP075116.1 RefSeq gene 821945 822523 . + . ID=gene-CCO40_RS03975;Name=CCO40_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS03975;old_locus_tag=CCO40_03975 NZ_CP075116.1 Protein Homology CDS 821945 822523 . + 0 ID=cds-WP_000027236.1;Parent=gene-CCO40_RS03975;Dbxref=GenBank:WP_000027236.1;Name=WP_000027236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=CCO40_RS03975;product=YecA/YgfB family protein;protein_id=WP_000027236.1;transl_table=11 NZ_CP075116.1 RefSeq gene 822549 823865 . + . ID=gene-CCO40_RS03980;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=CCO40_RS03980;old_locus_tag=CCO40_03980 NZ_CP075116.1 Protein Homology CDS 822549 823865 . + 0 ID=cds-WP_000193681.1;Parent=gene-CCO40_RS03980;Dbxref=GenBank:WP_000193681.1;Name=WP_000193681.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461974.1;locus_tag=CCO40_RS03980;product=Xaa-Pro aminopeptidase;protein_id=WP_000193681.1;transl_table=11 NZ_CP075116.1 RefSeq gene 823862 825040 . + . ID=gene-CCO40_RS03985;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=CCO40_RS03985;old_locus_tag=CCO40_03985 NZ_CP075116.1 Protein Homology CDS 823862 825040 . + 0 ID=cds-WP_000111142.1;Parent=gene-CCO40_RS03985;Dbxref=GenBank:WP_000111142.1;Name=WP_000111142.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461973.2;locus_tag=CCO40_RS03985;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_000111142.1;transl_table=11 NZ_CP075116.1 RefSeq gene 825166 826368 . + . ID=gene-CCO40_RS03990;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=CCO40_RS03990;old_locus_tag=CCO40_03990 NZ_CP075116.1 Protein Homology CDS 825166 826368 . + 0 ID=cds-WP_001192144.1;Parent=gene-CCO40_RS03990;Dbxref=GenBank:WP_001192144.1;Name=WP_001192144.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=CCO40_RS03990;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_001192144.1;transl_table=11 NZ_CP075116.1 RefSeq gene 826823 827917 . + . ID=gene-CCO40_RS03995;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=CCO40_RS03995;old_locus_tag=CCO40_03995 NZ_CP075116.1 Protein Homology CDS 826823 827917 . + 0 ID=cds-WP_000068738.1;Parent=gene-CCO40_RS03995;Dbxref=GenBank:WP_000068738.1;Name=WP_000068738.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461971.1;locus_tag=CCO40_RS03995;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_000068738.1;transl_table=11 NZ_CP075116.1 RefSeq gene 827943 828332 . + . ID=gene-CCO40_RS04000;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=CCO40_RS04000;old_locus_tag=CCO40_04000 NZ_CP075116.1 Protein Homology CDS 827943 828332 . + 0 ID=cds-WP_001295377.1;Parent=gene-CCO40_RS04000;Dbxref=GenBank:WP_001295377.1;Name=WP_001295377.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=CCO40_RS04000;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11 NZ_CP075116.1 RefSeq gene 828495 831368 . + . ID=gene-CCO40_RS04005;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=CCO40_RS04005;old_locus_tag=CCO40_04005 NZ_CP075116.1 Protein Homology CDS 828495 831368 . + 0 ID=cds-WP_001626633.1;Parent=gene-CCO40_RS04005;Dbxref=GenBank:WP_001626633.1;Name=WP_001626633.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=CCO40_RS04005;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_001626633.1;transl_table=11 NZ_CP075116.1 RefSeq gene 831824 832717 . + . ID=gene-CCO40_RS04010;Name=CCO40_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04010;old_locus_tag=CCO40_04010 NZ_CP075116.1 Protein Homology CDS 831824 832717 . + 0 ID=cds-WP_000819375.1;Parent=gene-CCO40_RS04010;Dbxref=GenBank:WP_000819375.1;Name=WP_000819375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461968.1;locus_tag=CCO40_RS04010;product=transporter;protein_id=WP_000819375.1;transl_table=11 NZ_CP075116.1 RefSeq gene 832765 834198 . - . ID=gene-CCO40_RS04015;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=CCO40_RS04015;old_locus_tag=CCO40_04015 NZ_CP075116.1 Protein Homology CDS 832765 834198 . - 0 ID=cds-WP_094889076.1;Parent=gene-CCO40_RS04015;Dbxref=GenBank:WP_094889076.1;Name=WP_094889076.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=CCO40_RS04015;product=6-phospho-beta-glucosidase BglA;protein_id=WP_094889076.1;transl_table=11 NZ_CP075116.1 RefSeq gene 834356 834667 . + . ID=gene-CCO40_RS04020;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=CCO40_RS04020;old_locus_tag=CCO40_04020 NZ_CP075116.1 Protein Homology CDS 834356 834667 . + 0 ID=cds-WP_001182976.1;Parent=gene-CCO40_RS04020;Dbxref=GenBank:WP_001182976.1;Name=WP_001182976.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461966.1;locus_tag=CCO40_RS04020;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_001182976.1;transl_table=11 NZ_CP075116.1 RefSeq gene 834831 835490 . + . ID=gene-CCO40_RS04025;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=CCO40_RS04025;old_locus_tag=CCO40_04025 NZ_CP075116.1 Protein Homology CDS 834831 835490 . + 0 ID=cds-WP_094889077.1;Parent=gene-CCO40_RS04025;Dbxref=GenBank:WP_094889077.1;Name=WP_094889077.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461965.1;locus_tag=CCO40_RS04025;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_094889077.1;transl_table=11 NZ_CP075116.1 RefSeq gene 835606 836586 . - . ID=gene-CCO40_RS04030;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=CCO40_RS04030;old_locus_tag=CCO40_04030 NZ_CP075116.1 Protein Homology CDS 835606 836586 . - 0 ID=cds-WP_000874176.1;Parent=gene-CCO40_RS04030;Dbxref=GenBank:WP_000874176.1;Name=WP_000874176.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461964.1;locus_tag=CCO40_RS04030;product=tRNA-modifying protein YgfZ;protein_id=WP_000874176.1;transl_table=11 NZ_CP075116.1 RefSeq gene 836836 837102 . + . ID=gene-CCO40_RS04035;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=CCO40_RS04035;old_locus_tag=CCO40_04035 NZ_CP075116.1 Protein Homology CDS 836836 837102 . + 0 ID=cds-WP_000351186.1;Parent=gene-CCO40_RS04035;Dbxref=GenBank:WP_000351186.1;Name=WP_000351186.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=CCO40_RS04035;product=FAD assembly factor SdhE;protein_id=WP_000351186.1;transl_table=11 NZ_CP075116.1 RefSeq gene 837083 837496 . + . ID=gene-CCO40_RS04040;Name=CCO40_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04040;old_locus_tag=CCO40_04040 NZ_CP075116.1 Protein Homology CDS 837083 837496 . + 0 ID=cds-WP_000244757.1;Parent=gene-CCO40_RS04040;Dbxref=GenBank:WP_000244757.1;Name=WP_000244757.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=CCO40_RS04040;product=protein YgfX;protein_id=WP_000244757.1;transl_table=11 NZ_CP075116.1 RefSeq gene 837549 838070 . - . ID=gene-CCO40_RS04045;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=CCO40_RS04045;old_locus_tag=CCO40_04045 NZ_CP075116.1 Protein Homology CDS 837549 838070 . - 0 ID=cds-WP_001055885.1;Parent=gene-CCO40_RS04045;Dbxref=GenBank:WP_001055885.1;Name=WP_001055885.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461961.1;locus_tag=CCO40_RS04045;product=flavodoxin FldB;protein_id=WP_001055885.1;transl_table=11 NZ_CP075116.1 RefSeq gene 838183 839079 . + . ID=gene-CCO40_RS04050;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=CCO40_RS04050;old_locus_tag=CCO40_04050 NZ_CP075116.1 Protein Homology CDS 838183 839079 . + 0 ID=cds-WP_000434302.1;Parent=gene-CCO40_RS04050;Dbxref=GenBank:WP_000434302.1;Name=WP_000434302.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461960.1;locus_tag=CCO40_RS04050;product=site-specific tyrosine recombinase XerD;protein_id=WP_000434302.1;transl_table=11 NZ_CP075116.1 RefSeq gene 839103 839816 . + . ID=gene-CCO40_RS04055;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=CCO40_RS04055;old_locus_tag=CCO40_04055 NZ_CP075116.1 Protein Homology CDS 839103 839816 . + 0 ID=cds-WP_000745623.1;Parent=gene-CCO40_RS04055;Dbxref=GenBank:WP_000745623.1;Name=WP_000745623.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461959.1;locus_tag=CCO40_RS04055;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000745623.1;transl_table=11 NZ_CP075116.1 RefSeq gene 839822 841555 . + . ID=gene-CCO40_RS04060;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=CCO40_RS04060;old_locus_tag=CCO40_04060 NZ_CP075116.1 Protein Homology CDS 839822 841555 . + 0 ID=cds-WP_000813394.1;Parent=gene-CCO40_RS04060;Dbxref=GenBank:WP_000813394.1;Name=WP_000813394.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461958.1;locus_tag=CCO40_RS04060;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_000813394.1;transl_table=11 NZ_CP075116.1 RefSeq gene 841660 842758 . + . ID=gene-CCO40_RS04065;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=CCO40_RS04065;old_locus_tag=CCO40_04065 NZ_CP075116.1 Protein Homology CDS 841660 841734 . + 0 ID=cds-WP_096059418.1;Parent=gene-CCO40_RS04065;Dbxref=GenBank:WP_096059418.1;Name=WP_096059418.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=CCO40_RS04065;product=peptide chain release factor 2;protein_id=WP_096059418.1;transl_table=11 NZ_CP075116.1 Protein Homology CDS 841736 842758 . + 0 ID=cds-WP_096059418.1;Parent=gene-CCO40_RS04065;Dbxref=GenBank:WP_096059418.1;Name=WP_096059418.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=CCO40_RS04065;product=peptide chain release factor 2;protein_id=WP_096059418.1;transl_table=11 NZ_CP075116.1 RefSeq gene 842768 844285 . + . ID=gene-CCO40_RS04070;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=CCO40_RS04070;old_locus_tag=CCO40_04070 NZ_CP075116.1 Protein Homology CDS 842768 844285 . + 0 ID=cds-WP_000003339.1;Parent=gene-CCO40_RS04070;Dbxref=GenBank:WP_000003339.1;Name=WP_000003339.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=CCO40_RS04070;product=lysine--tRNA ligase;protein_id=WP_000003339.1;transl_table=11 NZ_CP075116.1 RefSeq gene 844361 844906 . - . ID=gene-CCO40_RS04075;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=CCO40_RS04075;old_locus_tag=CCO40_04075 NZ_CP075116.1 Protein Homology CDS 844361 844906 . - 0 ID=cds-WP_000133994.1;Parent=gene-CCO40_RS04075;Dbxref=GenBank:WP_000133994.1;Name=WP_000133994.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461955.1;locus_tag=CCO40_RS04075;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_000133994.1;transl_table=11 NZ_CP075116.1 RefSeq gene 845171 845929 . + . ID=gene-CCO40_RS04080;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=CCO40_RS04080;old_locus_tag=CCO40_04080 NZ_CP075116.1 Protein Homology CDS 845171 845929 . + 0 ID=cds-WP_000244319.1;Parent=gene-CCO40_RS04080;Dbxref=GenBank:WP_000244319.1;Name=WP_000244319.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=CCO40_RS04080;product=amidase activator ActS;protein_id=WP_000244319.1;transl_table=11 NZ_CP075116.1 RefSeq gene 846009 846082 . + . ID=gene-CCO40_RS04085;Name=CCO40_RS04085;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS04085;old_locus_tag=CCO40_04085 NZ_CP075116.1 tRNAscan-SE tRNA 846009 846082 . + . ID=rna-CCO40_RS04085;Parent=gene-CCO40_RS04085;anticodon=(pos:846041..846043);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS04085;product=tRNA-Gly NZ_CP075116.1 tRNAscan-SE exon 846009 846082 . + . ID=exon-CCO40_RS04085-1;Parent=rna-CCO40_RS04085;anticodon=(pos:846041..846043);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS04085;product=tRNA-Gly NZ_CP075116.1 RefSeq gene 846247 847431 . + . ID=gene-CCO40_RS04090;Name=CCO40_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04090;old_locus_tag=CCO40_04090 NZ_CP075116.1 Protein Homology CDS 846247 847431 . + 0 ID=cds-WP_094889078.1;Parent=gene-CCO40_RS04090;Dbxref=GenBank:WP_094889078.1;Name=WP_094889078.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192954.1;locus_tag=CCO40_RS04090;product=tyrosine-type recombinase/integrase;protein_id=WP_094889078.1;transl_table=11 NZ_CP075116.1 RefSeq gene 847664 848773 . + . ID=gene-CCO40_RS04095;Name=CCO40_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04095;old_locus_tag=CCO40_04095 NZ_CP075116.1 Protein Homology CDS 847664 848773 . + 0 ID=cds-WP_094889079.1;Parent=gene-CCO40_RS04095;Dbxref=GenBank:WP_094889079.1;Name=WP_094889079.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004115262.1;locus_tag=CCO40_RS04095;product=dsDNA nuclease domain-containing protein;protein_id=WP_094889079.1;transl_table=11 NZ_CP075116.1 RefSeq gene 848782 850545 . + . ID=gene-CCO40_RS04100;Name=CCO40_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04100;old_locus_tag=CCO40_04100 NZ_CP075116.1 Protein Homology CDS 848782 850545 . + 0 ID=cds-WP_094889080.1;Parent=gene-CCO40_RS04100;Dbxref=GenBank:WP_094889080.1;Name=WP_094889080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004115261.1;locus_tag=CCO40_RS04100;product=P-loop NTPase family protein;protein_id=WP_094889080.1;transl_table=11 NZ_CP075116.1 RefSeq gene 850677 851027 . + . ID=gene-CCO40_RS04105;Name=arsR;gbkey=Gene;gene=arsR;gene_biotype=protein_coding;locus_tag=CCO40_RS04105;old_locus_tag=CCO40_04105 NZ_CP075116.1 Protein Homology CDS 850677 851027 . + 0 ID=cds-WP_094889081.1;Parent=gene-CCO40_RS04105;Dbxref=GenBank:WP_094889081.1;Name=WP_094889081.1;gbkey=CDS;gene=arsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152101.1;locus_tag=CCO40_RS04105;product=As(III)-sensing metalloregulatory transcriptional repressor ArsR;protein_id=WP_094889081.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 851107 851280 . + . ID=gene-CCO40_RS04110;Name=CCO40_RS04110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS04110;old_locus_tag=CCO40_04110;partial=true;pseudo=true;start_range=.,851107 NZ_CP075116.1 Protein Homology CDS 851107 851280 . + 0 ID=cds-CCO40_RS04110;Parent=gene-CCO40_RS04110;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312402.1;locus_tag=CCO40_RS04110;partial=true;product=thioredoxin domain-containing protein;pseudo=true;start_range=.,851107;transl_table=11 NZ_CP075116.1 RefSeq gene 851494 852459 . + . ID=gene-CCO40_RS04115;Name=CCO40_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04115;old_locus_tag=CCO40_04115 NZ_CP075116.1 Protein Homology CDS 851494 852459 . + 0 ID=cds-WP_001123709.1;Parent=gene-CCO40_RS04115;Dbxref=GenBank:WP_001123709.1;Name=WP_001123709.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524950.1;locus_tag=CCO40_RS04115;product=sugar-binding transcriptional regulator;protein_id=WP_001123709.1;transl_table=11 NZ_CP075116.1 RefSeq gene 852633 853091 . - . ID=gene-CCO40_RS04120;Name=CCO40_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04120;old_locus_tag=CCO40_04120 NZ_CP075116.1 Protein Homology CDS 852633 853091 . - 0 ID=cds-WP_080169924.1;Parent=gene-CCO40_RS04120;Dbxref=GenBank:WP_080169924.1;Name=WP_080169924.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0034219,GO:0008982,GO:0016301,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001683480.1;locus_tag=CCO40_RS04120;product=PTS sugar transporter subunit IIA;protein_id=WP_080169924.1;transl_table=11 NZ_CP075116.1 RefSeq gene 853099 853383 . - . ID=gene-CCO40_RS04125;Name=CCO40_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04125;old_locus_tag=CCO40_04125 NZ_CP075116.1 Protein Homology CDS 853099 853383 . - 0 ID=cds-WP_000723161.1;Parent=gene-CCO40_RS04125;Dbxref=GenBank:WP_000723161.1;Name=WP_000723161.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172369.1;locus_tag=CCO40_RS04125;product=PTS sugar transporter subunit IIB;protein_id=WP_000723161.1;transl_table=11 NZ_CP075116.1 RefSeq gene 853405 854775 . - . ID=gene-CCO40_RS04130;Name=CCO40_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04130;old_locus_tag=CCO40_04130 NZ_CP075116.1 Protein Homology CDS 853405 854775 . - 0 ID=cds-WP_094889082.1;Parent=gene-CCO40_RS04130;Dbxref=GenBank:WP_094889082.1;Name=WP_094889082.1;Ontology_term=GO:0009401,GO:0015796,GO:0015577,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=galactitol transmembrane transporter activity|0015577||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,galactitol transmembrane transport|0015796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015964568.1;locus_tag=CCO40_RS04130;product=PTS galactitol transporter subunit IIC;protein_id=WP_094889082.1;transl_table=11 NZ_CP075116.1 RefSeq gene 854779 855315 . - . ID=gene-CCO40_RS04135;Name=CCO40_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04135;old_locus_tag=CCO40_04135 NZ_CP075116.1 Protein Homology CDS 854779 855315 . - 0 ID=cds-WP_079814222.1;Parent=gene-CCO40_RS04135;Dbxref=GenBank:WP_079814222.1;Name=WP_079814222.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000850105.1;locus_tag=CCO40_RS04135;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_079814222.1;transl_table=11 NZ_CP075116.1 RefSeq gene 855697 856452 . + . ID=gene-CCO40_RS04140;Name=CCO40_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04140;old_locus_tag=CCO40_04140 NZ_CP075116.1 Protein Homology CDS 855697 856452 . + 0 ID=cds-WP_094889083.1;Parent=gene-CCO40_RS04140;Dbxref=GenBank:WP_094889083.1;Name=WP_094889083.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000281586.1;locus_tag=CCO40_RS04140;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_094889083.1;transl_table=11 NZ_CP075116.1 RefSeq gene 856771 857250 . + . ID=gene-CCO40_RS04145;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=CCO40_RS04145;old_locus_tag=CCO40_04145 NZ_CP075116.1 Protein Homology CDS 856771 857250 . + 0 ID=cds-WP_170930886.1;Parent=gene-CCO40_RS04145;Dbxref=GenBank:WP_170930886.1;Name=WP_170930886.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012512955.1;locus_tag=CCO40_RS04145;product=PTS galactitol transporter subunit IIA;protein_id=WP_170930886.1;transl_table=11 NZ_CP075116.1 RefSeq gene 857272 857565 . + . ID=gene-CCO40_RS04150;Name=CCO40_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04150;old_locus_tag=CCO40_04150 NZ_CP075116.1 Protein Homology CDS 857272 857565 . + 0 ID=cds-WP_000628511.1;Parent=gene-CCO40_RS04150;Dbxref=GenBank:WP_000628511.1;Name=WP_000628511.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004105500.1;locus_tag=CCO40_RS04150;product=PTS sugar transporter subunit IIB;protein_id=WP_000628511.1;transl_table=11 NZ_CP075116.1 RefSeq gene 857593 858846 . + . ID=gene-CCO40_RS04155;Name=CCO40_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04155;old_locus_tag=CCO40_04155 NZ_CP075116.1 Protein Homology CDS 857593 858846 . + 0 ID=cds-WP_000425557.1;Parent=gene-CCO40_RS04155;Dbxref=GenBank:WP_000425557.1;Name=WP_000425557.1;Ontology_term=GO:0009401,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000425551.1;locus_tag=CCO40_RS04155;product=PTS transporter subunit IIC;protein_id=WP_000425557.1;transl_table=11 NZ_CP075116.1 RefSeq gene 858865 859509 . + . ID=gene-CCO40_RS04160;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=CCO40_RS04160;old_locus_tag=CCO40_04160 NZ_CP075116.1 Protein Homology CDS 858865 859509 . + 0 ID=cds-WP_000057267.1;Parent=gene-CCO40_RS04160;Dbxref=GenBank:WP_000057267.1;Name=WP_000057267.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001062775.1;locus_tag=CCO40_RS04160;product=ribulose-phosphate 3-epimerase;protein_id=WP_000057267.1;transl_table=11 NZ_CP075116.1 RefSeq gene 859632 860384 . + . ID=gene-CCO40_RS04165;Name=CCO40_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04165;old_locus_tag=CCO40_04165 NZ_CP075116.1 Protein Homology CDS 859632 860384 . + 0 ID=cds-WP_000032693.1;Parent=gene-CCO40_RS04165;Dbxref=GenBank:WP_000032693.1;Name=WP_000032693.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064391.1;locus_tag=CCO40_RS04165;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_000032693.1;transl_table=11 NZ_CP075116.1 RefSeq gene 860399 860959 . + . ID=gene-CCO40_RS04170;Name=hxlB;gbkey=Gene;gene=hxlB;gene_biotype=protein_coding;locus_tag=CCO40_RS04170;old_locus_tag=CCO40_04170 NZ_CP075116.1 Protein Homology CDS 860399 860959 . + 0 ID=cds-WP_000116120.1;Parent=gene-CCO40_RS04170;Dbxref=GenBank:WP_000116120.1;Name=WP_000116120.1;Ontology_term=GO:1901135,GO:0016853,GO:0043800;gbkey=CDS;gene=hxlB;go_function=isomerase activity|0016853||IEA,6-phospho-3-hexuloisomerase activity|0043800||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000116013.1;locus_tag=CCO40_RS04170;product=6-phospho-3-hexuloisomerase;protein_id=WP_000116120.1;transl_table=11 NZ_CP075116.1 RefSeq gene 861569 862105 . + . ID=gene-CCO40_RS04175;Name=CCO40_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04175;old_locus_tag=CCO40_04175 NZ_CP075116.1 Protein Homology CDS 861569 862105 . + 0 ID=cds-WP_001038500.1;Parent=gene-CCO40_RS04175;Dbxref=GenBank:WP_001038500.1;Name=WP_001038500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461948.1;locus_tag=CCO40_RS04175;product=STM3031 family outer membrane protein;protein_id=WP_001038500.1;transl_table=11 NZ_CP075116.1 RefSeq gene 862152 862784 . + . ID=gene-CCO40_RS04180;Name=CCO40_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04180;old_locus_tag=CCO40_04180 NZ_CP075116.1 Protein Homology CDS 862152 862784 . + 0 ID=cds-WP_000835262.1;Parent=gene-CCO40_RS04180;Dbxref=GenBank:WP_000835262.1;Name=WP_000835262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461947.1;locus_tag=CCO40_RS04180;product=YfdX family protein;protein_id=WP_000835262.1;transl_table=11 NZ_CP075116.1 RefSeq gene 863503 864084 . + . ID=gene-CCO40_RS04185;Name=CCO40_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04185;old_locus_tag=CCO40_04185 NZ_CP075116.1 Protein Homology CDS 863503 864084 . + 0 ID=cds-WP_001244647.1;Parent=gene-CCO40_RS04185;Dbxref=GenBank:WP_001244647.1;Name=WP_001244647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406296.1;locus_tag=CCO40_RS04185;product=fimbrial protein;protein_id=WP_001244647.1;transl_table=11 NZ_CP075116.1 RefSeq gene 864204 866693 . + . ID=gene-CCO40_RS04190;Name=stdB;gbkey=Gene;gene=stdB;gene_biotype=protein_coding;locus_tag=CCO40_RS04190;old_locus_tag=CCO40_04190 NZ_CP075116.1 Protein Homology CDS 864204 866693 . + 0 ID=cds-WP_000705500.1;Parent=gene-CCO40_RS04190;Dbxref=GenBank:WP_000705500.1;Name=WP_000705500.1;gbkey=CDS;gene=stdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461945.1;locus_tag=CCO40_RS04190;product=fimbrial outer membrane usher protein StdB;protein_id=WP_000705500.1;transl_table=11 NZ_CP075116.1 RefSeq gene 866734 867477 . + . ID=gene-CCO40_RS04195;Name=stdC;gbkey=Gene;gene=stdC;gene_biotype=protein_coding;locus_tag=CCO40_RS04195;old_locus_tag=CCO40_04195 NZ_CP075116.1 Protein Homology CDS 866734 867477 . + 0 ID=cds-WP_000798493.1;Parent=gene-CCO40_RS04195;Dbxref=GenBank:WP_000798493.1;Name=WP_000798493.1;gbkey=CDS;gene=stdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461944.1;locus_tag=CCO40_RS04195;product=fimbrial biogenesis chaperone StdC;protein_id=WP_000798493.1;transl_table=11 NZ_CP075116.1 RefSeq gene 867474 868550 . + . ID=gene-CCO40_RS04200;Name=CCO40_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04200;old_locus_tag=CCO40_04200 NZ_CP075116.1 Protein Homology CDS 867474 868550 . + 0 ID=cds-WP_000141333.1;Parent=gene-CCO40_RS04200;Dbxref=GenBank:WP_000141333.1;Name=WP_000141333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461943.1;locus_tag=CCO40_RS04200;product=hypothetical protein;protein_id=WP_000141333.1;transl_table=11 NZ_CP075116.1 RefSeq gene 868695 869207 . + . ID=gene-CCO40_RS04205;Name=CCO40_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04205;old_locus_tag=CCO40_04205 NZ_CP075116.1 Protein Homology CDS 868695 869207 . + 0 ID=cds-WP_000336260.1;Parent=gene-CCO40_RS04205;Dbxref=GenBank:WP_000336260.1;Name=WP_000336260.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727965.1;locus_tag=CCO40_RS04205;product=CaiF/GrlA family transcriptional regulator;protein_id=WP_000336260.1;transl_table=11 NZ_CP075116.1 RefSeq gene 869194 869952 . + . ID=gene-CCO40_RS04210;Name=CCO40_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04210;old_locus_tag=CCO40_04210 NZ_CP075116.1 Protein Homology CDS 869194 869952 . + 0 ID=cds-WP_000134788.1;Parent=gene-CCO40_RS04210;Dbxref=GenBank:WP_000134788.1;Name=WP_000134788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461942.1;locus_tag=CCO40_RS04210;product=transcriptional regulator;protein_id=WP_000134788.1;transl_table=11 NZ_CP075116.1 RefSeq gene 870162 871052 . - . ID=gene-CCO40_RS04215;Name=CCO40_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04215;old_locus_tag=CCO40_04215 NZ_CP075116.1 Protein Homology CDS 870162 871052 . - 0 ID=cds-WP_001747399.1;Parent=gene-CCO40_RS04215;Dbxref=GenBank:WP_001747399.1;Name=WP_001747399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461941.1;locus_tag=CCO40_RS04215;product=nickel/cobalt efflux protein RcnA;protein_id=WP_001747399.1;transl_table=11 NZ_CP075116.1 RefSeq gene 871174 871446 . + . ID=gene-CCO40_RS04220;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=CCO40_RS04220;old_locus_tag=CCO40_04220 NZ_CP075116.1 Protein Homology CDS 871174 871446 . + 0 ID=cds-WP_094889084.1;Parent=gene-CCO40_RS04220;Dbxref=GenBank:WP_094889084.1;Name=WP_094889084.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461940.1;locus_tag=CCO40_RS04220;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_094889084.1;transl_table=11 NZ_CP075116.1 RefSeq gene 871477 872706 . - . ID=gene-CCO40_RS04225;Name=CCO40_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04225;old_locus_tag=CCO40_04225 NZ_CP075116.1 Protein Homology CDS 871477 872706 . - 0 ID=cds-WP_000036836.1;Parent=gene-CCO40_RS04225;Dbxref=GenBank:WP_000036836.1;Name=WP_000036836.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461939.1;locus_tag=CCO40_RS04225;product=amino acid permease;protein_id=WP_000036836.1;transl_table=11 NZ_CP075116.1 RefSeq gene 872848 873303 . - . ID=gene-CCO40_RS04230;Name=CCO40_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04230;old_locus_tag=CCO40_04230 NZ_CP075116.1 Protein Homology CDS 872848 873303 . - 0 ID=cds-WP_001519547.1;Parent=gene-CCO40_RS04230;Dbxref=GenBank:WP_001519547.1;Name=WP_001519547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465480.1;locus_tag=CCO40_RS04230;product=multidrug/biocide efflux PACE transporter;protein_id=WP_001519547.1;transl_table=11 NZ_CP075116.1 RefSeq gene 873407 874270 . + . ID=gene-CCO40_RS04235;Name=CCO40_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04235;old_locus_tag=CCO40_04235 NZ_CP075116.1 Protein Homology CDS 873407 874270 . + 0 ID=cds-WP_001270769.1;Parent=gene-CCO40_RS04235;Dbxref=GenBank:WP_001270769.1;Name=WP_001270769.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461937.1;locus_tag=CCO40_RS04235;product=LysR family transcriptional regulator;protein_id=WP_001270769.1;transl_table=11 NZ_CP075116.1 RefSeq gene 874393 875571 . + . ID=gene-CCO40_RS04240;Name=CCO40_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04240;old_locus_tag=CCO40_04240 NZ_CP075116.1 Protein Homology CDS 874393 875571 . + 0 ID=cds-WP_000665980.1;Parent=gene-CCO40_RS04240;Dbxref=GenBank:WP_000665980.1;Name=WP_000665980.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461936.1;locus_tag=CCO40_RS04240;product=acetyl-CoA C-acetyltransferase;protein_id=WP_000665980.1;transl_table=11 NZ_CP075116.1 RefSeq gene 876002 876838 . + . ID=gene-CCO40_RS04245;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=CCO40_RS04245;old_locus_tag=CCO40_04245 NZ_CP075116.1 Protein Homology CDS 876002 876838 . + 0 ID=cds-WP_000383279.1;Parent=gene-CCO40_RS04245;Dbxref=GenBank:WP_000383279.1;Name=WP_000383279.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461935.1;locus_tag=CCO40_RS04245;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_000383279.1;transl_table=11 NZ_CP075116.1 RefSeq gene 876895 877656 . + . ID=gene-CCO40_RS04250;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=CCO40_RS04250;old_locus_tag=CCO40_04250 NZ_CP075116.1 Protein Homology CDS 876895 877656 . + 0 ID=cds-WP_000602498.1;Parent=gene-CCO40_RS04250;Dbxref=GenBank:WP_000602498.1;Name=WP_000602498.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461934.1;locus_tag=CCO40_RS04250;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_000602498.1;transl_table=11 NZ_CP075116.1 RefSeq gene 878010 879428 . + . ID=gene-CCO40_RS04255;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=CCO40_RS04255;old_locus_tag=CCO40_04255 NZ_CP075116.1 Protein Homology CDS 878010 879428 . + 0 ID=cds-WP_000253651.1;Parent=gene-CCO40_RS04255;Dbxref=GenBank:WP_000253651.1;Name=WP_000253651.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=CCO40_RS04255;product=arabinose-proton symporter AraE;protein_id=WP_000253651.1;transl_table=11 NZ_CP075116.1 RefSeq gene 879542 880249 . + . ID=gene-CCO40_RS04260;Name=CCO40_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04260;old_locus_tag=CCO40_04260 NZ_CP075116.1 Protein Homology CDS 879542 880249 . + 0 ID=cds-WP_000848631.1;Parent=gene-CCO40_RS04260;Dbxref=GenBank:WP_000848631.1;Name=WP_000848631.1;Ontology_term=GO:0008152,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461932.1;locus_tag=CCO40_RS04260;product=aspartate/glutamate racemase;protein_id=WP_000848631.1;transl_table=11 NZ_CP075116.1 RefSeq gene 880221 881156 . - . ID=gene-CCO40_RS04265;Name=CCO40_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04265;old_locus_tag=CCO40_04265 NZ_CP075116.1 Protein Homology CDS 880221 881156 . - 0 ID=cds-WP_000741798.1;Parent=gene-CCO40_RS04265;Dbxref=GenBank:WP_000741798.1;Name=WP_000741798.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461931.1;locus_tag=CCO40_RS04265;product=LysR family transcriptional regulator;protein_id=WP_000741798.1;transl_table=11 NZ_CP075116.1 RefSeq gene 881274 882536 . + . ID=gene-CCO40_RS04270;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=CCO40_RS04270;old_locus_tag=CCO40_04270 NZ_CP075116.1 Protein Homology CDS 881274 882536 . + 0 ID=cds-WP_023194900.1;Parent=gene-CCO40_RS04270;Dbxref=GenBank:WP_023194900.1;Name=WP_023194900.1;Ontology_term=GO:0009085,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406298.1;locus_tag=CCO40_RS04270;product=diaminopimelate decarboxylase;protein_id=WP_023194900.1;transl_table=11 NZ_CP075116.1 RefSeq gene 882546 883568 . - . ID=gene-CCO40_RS04275;Name=CCO40_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04275;old_locus_tag=CCO40_04275 NZ_CP075116.1 Protein Homology CDS 882546 883568 . - 0 ID=cds-WP_094889085.1;Parent=gene-CCO40_RS04275;Dbxref=GenBank:WP_094889085.1;Name=WP_094889085.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461929.1;locus_tag=CCO40_RS04275;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_094889085.1;transl_table=11 NZ_CP075116.1 RefSeq gene 883579 884607 . - . ID=gene-CCO40_RS04280;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=CCO40_RS04280;old_locus_tag=CCO40_04280 NZ_CP075116.1 Protein Homology CDS 883579 884607 . - 0 ID=cds-WP_000201030.1;Parent=gene-CCO40_RS04280;Dbxref=GenBank:WP_000201030.1;Name=WP_000201030.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461928.1;locus_tag=CCO40_RS04280;product=HTH-type transcriptional regulator GalR;protein_id=WP_000201030.1;transl_table=11 NZ_CP075116.1 RefSeq gene 885200 887359 . + . ID=gene-CCO40_RS04285;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=CCO40_RS04285;old_locus_tag=CCO40_04285 NZ_CP075116.1 Protein Homology CDS 885200 887359 . + 0 ID=cds-WP_000896101.1;Parent=gene-CCO40_RS04285;Dbxref=GenBank:WP_000896101.1;Name=WP_000896101.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=CCO40_RS04285;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_000896101.1;transl_table=11 NZ_CP075116.1 RefSeq gene 887352 888554 . + . ID=gene-CCO40_RS04290;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=CCO40_RS04290;old_locus_tag=CCO40_04290 NZ_CP075116.1 Protein Homology CDS 887352 888554 . + 0 ID=cds-WP_000004686.1;Parent=gene-CCO40_RS04290;Dbxref=GenBank:WP_000004686.1;Name=WP_000004686.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461926.1;locus_tag=CCO40_RS04290;product=lysophospholipid transporter LplT;protein_id=WP_000004686.1;transl_table=11 NZ_CP075116.1 RefSeq gene 888641 889681 . - . ID=gene-CCO40_RS04295;Name=CCO40_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04295;old_locus_tag=CCO40_04295 NZ_CP075116.1 Protein Homology CDS 888641 889681 . - 0 ID=cds-WP_000558960.1;Parent=gene-CCO40_RS04295;Dbxref=GenBank:WP_000558960.1;Name=WP_000558960.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461925.1;locus_tag=CCO40_RS04295;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_000558960.1;transl_table=11 NZ_CP075116.1 RefSeq gene 889872 890090 . - . ID=gene-CCO40_RS04300;Name=CCO40_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04300;old_locus_tag=CCO40_04300 NZ_CP075116.1 Protein Homology CDS 889872 890090 . - 0 ID=cds-WP_000758662.1;Parent=gene-CCO40_RS04300;Dbxref=GenBank:WP_000758662.1;Name=WP_000758662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461924.1;locus_tag=CCO40_RS04300;product=YgdI/YgdR family lipoprotein;protein_id=WP_000758662.1;transl_table=11 NZ_CP075116.1 RefSeq gene 890260 890973 . - . ID=gene-CCO40_RS04305;Name=CCO40_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04305;old_locus_tag=CCO40_04305 NZ_CP075116.1 Protein Homology CDS 890260 890973 . - 0 ID=cds-WP_000895635.1;Parent=gene-CCO40_RS04305;Dbxref=GenBank:WP_000895635.1;Name=WP_000895635.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461923.1;locus_tag=CCO40_RS04305;product=TerC family protein;protein_id=WP_000895635.1;transl_table=11 NZ_CP075116.1 RefSeq gene 891155 891850 . - . ID=gene-CCO40_RS04310;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=CCO40_RS04310;old_locus_tag=CCO40_04310 NZ_CP075116.1 Protein Homology CDS 891155 891850 . - 0 ID=cds-WP_094889086.1;Parent=gene-CCO40_RS04310;Dbxref=GenBank:WP_094889086.1;Name=WP_094889086.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461922.1;locus_tag=CCO40_RS04310;product=DNA mismatch repair endonuclease MutH;protein_id=WP_094889086.1;transl_table=11 NZ_CP075116.1 RefSeq gene 892533 893063 . + . ID=gene-CCO40_RS04315;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=CCO40_RS04315;old_locus_tag=CCO40_04315 NZ_CP075116.1 Protein Homology CDS 892533 893063 . + 0 ID=cds-WP_000564481.1;Parent=gene-CCO40_RS04315;Dbxref=GenBank:WP_000564481.1;Name=WP_000564481.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=CCO40_RS04315;product=RNA pyrophosphohydrolase;protein_id=WP_000564481.1;transl_table=11 NZ_CP075116.1 RefSeq gene 893076 895322 . + . ID=gene-CCO40_RS04320;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=CCO40_RS04320;old_locus_tag=CCO40_04320 NZ_CP075116.1 Protein Homology CDS 893076 895322 . + 0 ID=cds-WP_000957884.1;Parent=gene-CCO40_RS04320;Dbxref=GenBank:WP_000957884.1;Name=WP_000957884.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461920.1;locus_tag=CCO40_RS04320;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000957884.1;transl_table=11 NZ_CP075116.1 RefSeq gene 895538 896413 . + . ID=gene-CCO40_RS04325;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=CCO40_RS04325;old_locus_tag=CCO40_04325 NZ_CP075116.1 Protein Homology CDS 895538 896413 . + 0 ID=cds-WP_000204645.1;Parent=gene-CCO40_RS04325;Dbxref=GenBank:WP_000204645.1;Name=WP_000204645.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461919.1;locus_tag=CCO40_RS04325;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204645.1;transl_table=11 NZ_CP075116.1 RefSeq gene 896420 897214 . + . ID=gene-CCO40_RS04330;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=CCO40_RS04330;old_locus_tag=CCO40_04330 NZ_CP075116.1 Protein Homology CDS 896420 897214 . + 0 ID=cds-WP_000816247.1;Parent=gene-CCO40_RS04330;Dbxref=GenBank:WP_000816247.1;Name=WP_000816247.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=CCO40_RS04330;product=thymidylate synthase;protein_id=WP_000816247.1;transl_table=11 NZ_CP075116.1 RefSeq gene 897399 897869 . + . ID=gene-CCO40_RS04335;Name=CCO40_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04335;old_locus_tag=CCO40_04335 NZ_CP075116.1 Protein Homology CDS 897399 897869 . + 0 ID=cds-WP_000744668.1;Parent=gene-CCO40_RS04335;Dbxref=GenBank:WP_000744668.1;Name=WP_000744668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077605.1;locus_tag=CCO40_RS04335;product=prepilin peptidase-dependent protein;protein_id=WP_000744668.1;transl_table=11 NZ_CP075116.1 RefSeq gene 897860 898423 . + . ID=gene-CCO40_RS04340;Name=CCO40_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04340;old_locus_tag=CCO40_04340 NZ_CP075116.1 Protein Homology CDS 897860 898423 . + 0 ID=cds-WP_000029145.1;Parent=gene-CCO40_RS04340;Dbxref=GenBank:WP_000029145.1;Name=WP_000029145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461916.1;locus_tag=CCO40_RS04340;product=prepilin peptidase-dependent protein;protein_id=WP_000029145.1;transl_table=11 NZ_CP075116.1 RefSeq gene 898420 898827 . + . ID=gene-CCO40_RS04345;Name=CCO40_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04345;old_locus_tag=CCO40_04345 NZ_CP075116.1 Protein Homology CDS 898420 898827 . + 0 ID=cds-WP_001078534.1;Parent=gene-CCO40_RS04345;Dbxref=GenBank:WP_001078534.1;Name=WP_001078534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461915.1;locus_tag=CCO40_RS04345;product=DUF2509 family protein;protein_id=WP_001078534.1;transl_table=11 NZ_CP075116.1 RefSeq gene 898812 899132 . + . ID=gene-CCO40_RS04350;Name=CCO40_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04350;old_locus_tag=CCO40_04350 NZ_CP075116.1 Protein Homology CDS 898812 899132 . + 0 ID=cds-WP_000019291.1;Parent=gene-CCO40_RS04350;Dbxref=GenBank:WP_000019291.1;Name=WP_000019291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461914.1;locus_tag=CCO40_RS04350;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_000019291.1;transl_table=11 NZ_CP075116.1 RefSeq gene 899148 902519 . + . ID=gene-CCO40_RS04355;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=CCO40_RS04355;old_locus_tag=CCO40_04355 NZ_CP075116.1 Protein Homology CDS 899148 902519 . + 0 ID=cds-WP_045901751.1;Parent=gene-CCO40_RS04355;Dbxref=GenBank:WP_045901751.1;Name=WP_045901751.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461913.2;locus_tag=CCO40_RS04355;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_045901751.1;transl_table=11 NZ_CP075116.1 RefSeq gene 902697 905585 . + . ID=gene-CCO40_RS04360;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=CCO40_RS04360;old_locus_tag=CCO40_04360 NZ_CP075116.1 Protein Homology CDS 902697 905585 . + 0 ID=cds-WP_094889087.1;Parent=gene-CCO40_RS04360;Dbxref=GenBank:WP_094889087.1;Name=WP_094889087.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461912.1;locus_tag=CCO40_RS04360;product=pitrilysin;protein_id=WP_094889087.1;transl_table=11 NZ_CP075116.1 RefSeq gene 905578 909123 . + . ID=gene-CCO40_RS04365;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=CCO40_RS04365;old_locus_tag=CCO40_04365 NZ_CP075116.1 Protein Homology CDS 905578 909123 . + 0 ID=cds-WP_094889088.1;Parent=gene-CCO40_RS04365;Dbxref=GenBank:WP_094889088.1;Name=WP_094889088.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461911.1;locus_tag=CCO40_RS04365;product=exodeoxyribonuclease V subunit beta;protein_id=WP_094889088.1;transl_table=11 NZ_CP075116.1 RefSeq gene 909120 910955 . + . ID=gene-CCO40_RS04370;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=CCO40_RS04370;old_locus_tag=CCO40_04370 NZ_CP075116.1 Protein Homology CDS 909120 910955 . + 0 ID=cds-WP_064043403.1;Parent=gene-CCO40_RS04370;Dbxref=GenBank:WP_064043403.1;Name=WP_064043403.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461910.1;locus_tag=CCO40_RS04370;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_064043403.1;transl_table=11 NZ_CP075116.1 RefSeq gene 911057 912388 . - . ID=gene-CCO40_RS04375;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=CCO40_RS04375;old_locus_tag=CCO40_04375 NZ_CP075116.1 Protein Homology CDS 911057 912388 . - 0 ID=cds-WP_000588964.1;Parent=gene-CCO40_RS04375;Dbxref=GenBank:WP_000588964.1;Name=WP_000588964.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity%2C acting on acetyl-CoA as donor|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461909.1;locus_tag=CCO40_RS04375;product=amino-acid N-acetyltransferase;protein_id=WP_000588964.1;transl_table=11 NZ_CP075116.1 RefSeq gene 912621 913874 . + . ID=gene-CCO40_RS04380;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=CCO40_RS04380;old_locus_tag=CCO40_04380 NZ_CP075116.1 Protein Homology CDS 912621 913874 . + 0 ID=cds-WP_000011919.1;Parent=gene-CCO40_RS04380;Dbxref=GenBank:WP_000011919.1;Name=WP_000011919.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461908.1;locus_tag=CCO40_RS04380;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_000011919.1;transl_table=11 NZ_CP075116.1 RefSeq gene 913984 914060 . - . ID=gene-CCO40_RS04385;Name=CCO40_RS04385;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS04385;old_locus_tag=CCO40_04385 NZ_CP075116.1 tRNAscan-SE tRNA 913984 914060 . - . ID=rna-CCO40_RS04385;Parent=gene-CCO40_RS04385;anticodon=(pos:complement(914024..914026));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS04385;product=tRNA-Met NZ_CP075116.1 tRNAscan-SE exon 913984 914060 . - . ID=exon-CCO40_RS04385-1;Parent=rna-CCO40_RS04385;anticodon=(pos:complement(914024..914026));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS04385;product=tRNA-Met NZ_CP075116.1 RefSeq gene 914268 915365 . + . ID=gene-CCO40_RS04390;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=CCO40_RS04390;old_locus_tag=CCO40_04390 NZ_CP075116.1 Protein Homology CDS 914268 915365 . + 0 ID=cds-WP_000678626.1;Parent=gene-CCO40_RS04390;Dbxref=GenBank:WP_000678626.1;Name=WP_000678626.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=CCO40_RS04390;product=murein transglycosylase A;protein_id=WP_000678626.1;transl_table=11 NZ_CP075116.1 RefSeq gene 915475 916281 . + . ID=gene-CCO40_RS04395;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=CCO40_RS04395;old_locus_tag=CCO40_04395 NZ_CP075116.1 Protein Homology CDS 915475 916281 . + 0 ID=cds-WP_000117750.1;Parent=gene-CCO40_RS04395;Dbxref=GenBank:WP_000117750.1;Name=WP_000117750.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461906.1;locus_tag=CCO40_RS04395;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_000117750.1;transl_table=11 NZ_CP075116.1 RefSeq gene 916333 917220 . - . ID=gene-CCO40_RS04400;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=CCO40_RS04400;old_locus_tag=CCO40_04400 NZ_CP075116.1 Protein Homology CDS 916333 917220 . - 0 ID=cds-WP_077248417.1;Parent=gene-CCO40_RS04400;Dbxref=GenBank:WP_077248417.1;Name=WP_077248417.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=CCO40_RS04400;product=EamA family transporter RarD;protein_id=WP_077248417.1;transl_table=11 NZ_CP075116.1 RefSeq gene 917520 917963 . - . ID=gene-CCO40_RS04405;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=CCO40_RS04405;old_locus_tag=CCO40_04405 NZ_CP075116.1 Protein Homology CDS 917520 917963 . - 0 ID=cds-WP_000184199.1;Parent=gene-CCO40_RS04405;Dbxref=GenBank:WP_000184199.1;Name=WP_000184199.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000184199.1;locus_tag=CCO40_RS04405;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_000184199.1;transl_table=11 NZ_CP075116.1 RefSeq gene 917963 919168 . - . ID=gene-CCO40_RS04410;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=CCO40_RS04410;old_locus_tag=CCO40_04410 NZ_CP075116.1 Protein Homology CDS 917963 919168 . - 0 ID=cds-WP_000991053.1;Parent=gene-CCO40_RS04410;Dbxref=GenBank:WP_000991053.1;Name=WP_000991053.1;Ontology_term=GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461903.1;locus_tag=CCO40_RS04410;product=cysteine desulfurase CsdA;protein_id=WP_000991053.1;transl_table=11 NZ_CP075116.1 RefSeq gene 919361 919588 . + . ID=gene-CCO40_RS04415;Name=CCO40_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04415;old_locus_tag=CCO40_04415 NZ_CP075116.1 Protein Homology CDS 919361 919588 . + 0 ID=cds-WP_000750393.1;Parent=gene-CCO40_RS04415;Dbxref=GenBank:WP_000750393.1;Name=WP_000750393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461902.1;locus_tag=CCO40_RS04415;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750393.1;transl_table=11 NZ_CP075116.1 RefSeq gene 919935 920852 . + . ID=gene-CCO40_RS04420;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=CCO40_RS04420;old_locus_tag=CCO40_04420 NZ_CP075116.1 Protein Homology CDS 919935 920852 . + 0 ID=cds-WP_000044409.1;Parent=gene-CCO40_RS04420;Dbxref=GenBank:WP_000044409.1;Name=WP_000044409.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=CCO40_RS04420;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_000044409.1;transl_table=11 NZ_CP075116.1 RefSeq gene 920871 921266 . + . ID=gene-CCO40_RS04425;Name=CCO40_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04425;old_locus_tag=CCO40_04425 NZ_CP075116.1 Protein Homology CDS 920871 921266 . + 0 ID=cds-WP_000203913.1;Parent=gene-CCO40_RS04425;Dbxref=GenBank:WP_000203913.1;Name=WP_000203913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461900.1;locus_tag=CCO40_RS04425;product=DUF423 domain-containing protein;protein_id=WP_000203913.1;transl_table=11 NZ_CP075116.1 RefSeq gene 921259 922359 . + . ID=gene-CCO40_RS04430;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=CCO40_RS04430;old_locus_tag=CCO40_04430 NZ_CP075116.1 Protein Homology CDS 921259 922359 . + 0 ID=cds-WP_001045494.1;Parent=gene-CCO40_RS04430;Dbxref=GenBank:WP_001045494.1;Name=WP_001045494.1;Ontology_term=GO:0032259,GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=CCO40_RS04430;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_001045494.1;transl_table=11 NZ_CP075116.1 RefSeq gene 922406 923116 . - . ID=gene-CCO40_RS04435;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=CCO40_RS04435;old_locus_tag=CCO40_04435 NZ_CP075116.1 Protein Homology CDS 922406 923116 . - 0 ID=cds-WP_000642330.1;Parent=gene-CCO40_RS04435;Dbxref=GenBank:WP_000642330.1;Name=WP_000642330.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461898.1;locus_tag=CCO40_RS04435;product=L-fucose operon activator;protein_id=WP_000642330.1;transl_table=11 NZ_CP075116.1 RefSeq gene 923174 923596 . - . ID=gene-CCO40_RS04440;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=CCO40_RS04440;old_locus_tag=CCO40_04440 NZ_CP075116.1 Protein Homology CDS 923174 923596 . - 0 ID=cds-WP_000920848.1;Parent=gene-CCO40_RS04440;Dbxref=GenBank:WP_000920848.1;Name=WP_000920848.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461897.1;locus_tag=CCO40_RS04440;product=L-fucose mutarotase;protein_id=WP_000920848.1;transl_table=11 NZ_CP075116.1 RefSeq gene 923598 925016 . - . ID=gene-CCO40_RS04445;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=CCO40_RS04445;old_locus_tag=CCO40_04445 NZ_CP075116.1 Protein Homology CDS 923598 925016 . - 0 ID=cds-WP_000806780.1;Parent=gene-CCO40_RS04445;Dbxref=GenBank:WP_000806780.1;Name=WP_000806780.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=CCO40_RS04445;product=L-fuculokinase;protein_id=WP_000806780.1;transl_table=11 NZ_CP075116.1 RefSeq gene 925117 926892 . - . ID=gene-CCO40_RS04450;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=CCO40_RS04450;old_locus_tag=CCO40_04450 NZ_CP075116.1 Protein Homology CDS 925117 926892 . - 0 ID=cds-WP_023170953.1;Parent=gene-CCO40_RS04450;Dbxref=GenBank:WP_023170953.1;Name=WP_023170953.1;Ontology_term=GO:0042355,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=CCO40_RS04450;product=L-fucose isomerase;protein_id=WP_023170953.1;transl_table=11 NZ_CP075116.1 RefSeq gene 926924 928240 . - . ID=gene-CCO40_RS04455;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=CCO40_RS04455;old_locus_tag=CCO40_04455 NZ_CP075116.1 Protein Homology CDS 926924 928240 . - 0 ID=cds-WP_000528622.1;Parent=gene-CCO40_RS04455;Dbxref=GenBank:WP_000528622.1;Name=WP_000528622.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=CCO40_RS04455;product=L-fucose:H+ symporter permease;protein_id=WP_000528622.1;transl_table=11 NZ_CP075116.1 RefSeq gene 928796 929443 . + . ID=gene-CCO40_RS04460;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=CCO40_RS04460;old_locus_tag=CCO40_04460 NZ_CP075116.1 Protein Homology CDS 928796 929443 . + 0 ID=cds-WP_000440828.1;Parent=gene-CCO40_RS04460;Dbxref=GenBank:WP_000440828.1;Name=WP_000440828.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461894.1;locus_tag=CCO40_RS04460;product=L-fuculose-phosphate aldolase;protein_id=WP_000440828.1;transl_table=11 NZ_CP075116.1 RefSeq gene 929460 930608 . + . ID=gene-CCO40_RS04465;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=CCO40_RS04465;old_locus_tag=CCO40_04465 NZ_CP075116.1 Protein Homology CDS 929460 930608 . + 0 ID=cds-WP_000013565.1;Parent=gene-CCO40_RS04465;Dbxref=GenBank:WP_000013565.1;Name=WP_000013565.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=CCO40_RS04465;product=lactaldehyde reductase;protein_id=WP_000013565.1;transl_table=11 NZ_CP075116.1 RefSeq gene 930700 931455 . - . ID=gene-CCO40_RS04470;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=CCO40_RS04470;old_locus_tag=CCO40_04470 NZ_CP075116.1 Protein Homology CDS 930700 931455 . - 0 ID=cds-WP_001519360.1;Parent=gene-CCO40_RS04470;Dbxref=GenBank:WP_001519360.1;Name=WP_001519360.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=CCO40_RS04470;product=flap endonuclease Xni;protein_id=WP_001519360.1;transl_table=11 NZ_CP075116.1 RefSeq gene 931626 932993 . - . ID=gene-CCO40_RS04475;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=CCO40_RS04475;old_locus_tag=CCO40_04475 NZ_CP075116.1 Protein Homology CDS 931626 932993 . - 0 ID=cds-WP_000626384.1;Parent=gene-CCO40_RS04475;Dbxref=GenBank:WP_000626384.1;Name=WP_000626384.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=CCO40_RS04475;product=L-serine ammonia-lyase II;protein_id=WP_000626384.1;transl_table=11 NZ_CP075116.1 RefSeq gene 933052 934341 . - . ID=gene-CCO40_RS04480;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=CCO40_RS04480;old_locus_tag=CCO40_04480 NZ_CP075116.1 Protein Homology CDS 933052 934341 . - 0 ID=cds-WP_000450462.1;Parent=gene-CCO40_RS04480;Dbxref=GenBank:WP_000450462.1;Name=WP_000450462.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461890.1;locus_tag=CCO40_RS04480;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_000450462.1;transl_table=11 NZ_CP075116.1 RefSeq gene 934906 936270 . - . ID=gene-CCO40_RS04485;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=CCO40_RS04485;old_locus_tag=CCO40_04485 NZ_CP075116.1 Protein Homology CDS 934906 936270 . - 0 ID=cds-WP_000627973.1;Parent=gene-CCO40_RS04485;Dbxref=GenBank:WP_000627973.1;Name=WP_000627973.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=CCO40_RS04485;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_000627973.1;transl_table=11 NZ_CP075116.1 RefSeq gene 936383 937231 . - . ID=gene-CCO40_RS04490;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=CCO40_RS04490;old_locus_tag=CCO40_04490 NZ_CP075116.1 Protein Homology CDS 936383 937231 . - 0 ID=cds-WP_000100459.1;Parent=gene-CCO40_RS04490;Dbxref=GenBank:WP_000100459.1;Name=WP_000100459.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461888.1;locus_tag=CCO40_RS04490;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_000100459.1;transl_table=11 NZ_CP075116.1 RefSeq gene 937300 937845 . + . ID=gene-CCO40_RS04495;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=CCO40_RS04495;old_locus_tag=CCO40_04495 NZ_CP075116.1 Protein Homology CDS 937300 937845 . + 0 ID=cds-WP_000343990.1;Parent=gene-CCO40_RS04495;Dbxref=GenBank:WP_000343990.1;Name=WP_000343990.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461887.1;locus_tag=CCO40_RS04495;product=SecY-interacting protein;protein_id=WP_000343990.1;transl_table=11 NZ_CP075116.1 RefSeq gene 938457 938786 . + . ID=gene-CCO40_RS04500;Name=CCO40_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04500;old_locus_tag=CCO40_04500 NZ_CP075116.1 Protein Homology CDS 938457 938786 . + 0 ID=cds-WP_000207016.1;Parent=gene-CCO40_RS04500;Dbxref=GenBank:WP_000207016.1;Name=WP_000207016.1;Ontology_term=GO:0044010;gbkey=CDS;go_process=single-species biofilm formation|0044010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461886.1;locus_tag=CCO40_RS04500;product=YqcC family protein;protein_id=WP_000207016.1;transl_table=11 NZ_CP075116.1 RefSeq gene 938786 939568 . + . ID=gene-CCO40_RS04505;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=CCO40_RS04505;old_locus_tag=CCO40_04505 NZ_CP075116.1 Protein Homology CDS 938786 939568 . + 0 ID=cds-WP_000890027.1;Parent=gene-CCO40_RS04505;Dbxref=GenBank:WP_000890027.1;Name=WP_000890027.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461885.1;locus_tag=CCO40_RS04505;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_000890027.1;transl_table=11 NZ_CP075116.1 RefSeq gene 939587 940036 . + . ID=gene-CCO40_RS04510;Name=CCO40_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04510;old_locus_tag=CCO40_04510 NZ_CP075116.1 Protein Homology CDS 939587 940036 . + 0 ID=cds-WP_000807739.1;Parent=gene-CCO40_RS04510;Dbxref=GenBank:WP_000807739.1;Name=WP_000807739.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461884.1;locus_tag=CCO40_RS04510;product=flavodoxin;protein_id=WP_000807739.1;transl_table=11 NZ_CP075116.1 RefSeq gene 940186 940437 . - . ID=gene-CCO40_RS04515;Name=CCO40_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04515;old_locus_tag=CCO40_04515 NZ_CP075116.1 GeneMarkS-2+ CDS 940186 940437 . - 0 ID=cds-WP_001626563.1;Parent=gene-CCO40_RS04515;Dbxref=GenBank:WP_001626563.1;Name=WP_001626563.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO40_RS04515;product=hypothetical protein;protein_id=WP_001626563.1;transl_table=11 NZ_CP075116.1 RefSeq gene 940517 941875 . + . ID=gene-CCO40_RS04520;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=CCO40_RS04520;old_locus_tag=CCO40_04520 NZ_CP075116.1 Protein Homology CDS 940517 941875 . + 0 ID=cds-WP_000097015.1;Parent=gene-CCO40_RS04520;Dbxref=GenBank:WP_000097015.1;Name=WP_000097015.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=CCO40_RS04520;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_000097015.1;transl_table=11 NZ_CP075116.1 RefSeq gene 941872 943212 . + . ID=gene-CCO40_RS04525;Name=CCO40_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04525;old_locus_tag=CCO40_04525 NZ_CP075116.1 Protein Homology CDS 941872 943212 . + 0 ID=cds-WP_094889089.1;Parent=gene-CCO40_RS04525;Dbxref=GenBank:WP_094889089.1;Name=WP_094889089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=CCO40_RS04525;product=enolase C-terminal domain-like protein;protein_id=WP_094889089.1;transl_table=11 NZ_CP075116.1 RefSeq gene 943233 944573 . + . ID=gene-CCO40_RS04530;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=CCO40_RS04530;old_locus_tag=CCO40_04530 NZ_CP075116.1 Protein Homology CDS 943233 944573 . + 0 ID=cds-WP_000107113.1;Parent=gene-CCO40_RS04530;Dbxref=GenBank:WP_000107113.1;Name=WP_000107113.1;Ontology_term=GO:0042838,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=D-glucarate catabolic process|0042838||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=CCO40_RS04530;product=glucarate dehydratase;protein_id=WP_000107113.1;transl_table=11 NZ_CP075116.1 RefSeq gene 944651 945793 . + . ID=gene-CCO40_RS04535;Name=CCO40_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04535;old_locus_tag=CCO40_04535 NZ_CP075116.1 Protein Homology CDS 944651 945793 . + 0 ID=cds-WP_000706479.1;Parent=gene-CCO40_RS04535;Dbxref=GenBank:WP_000706479.1;Name=WP_000706479.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=CCO40_RS04535;product=glycerate kinase;protein_id=WP_000706479.1;transl_table=11 NZ_CP075116.1 RefSeq gene 945837 948593 . - . ID=gene-CCO40_RS04540;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=CCO40_RS04540;old_locus_tag=CCO40_04540 NZ_CP075116.1 Protein Homology CDS 945837 948593 . - 0 ID=cds-WP_000186400.1;Parent=gene-CCO40_RS04540;Dbxref=GenBank:WP_000186400.1;Name=WP_000186400.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461879.1;locus_tag=CCO40_RS04540;product=two-component sensor histidine kinase BarA;protein_id=WP_000186400.1;transl_table=11 NZ_CP075116.1 RefSeq gene 948651 949946 . + . ID=gene-CCO40_RS04545;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=CCO40_RS04545;old_locus_tag=CCO40_04545 NZ_CP075116.1 Protein Homology CDS 948651 949946 . + 0 ID=cds-WP_000046849.1;Parent=gene-CCO40_RS04545;Dbxref=GenBank:WP_000046849.1;Name=WP_000046849.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461878.1;locus_tag=CCO40_RS04545;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_000046849.1;transl_table=11 NZ_CP075116.1 RefSeq gene 949998 952232 . + . ID=gene-CCO40_RS04550;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=CCO40_RS04550;old_locus_tag=CCO40_04550 NZ_CP075116.1 Protein Homology CDS 949998 952232 . + 0 ID=cds-WP_000226838.1;Parent=gene-CCO40_RS04550;Dbxref=GenBank:WP_000226838.1;Name=WP_000226838.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461877.1;locus_tag=CCO40_RS04550;product=GTP diphosphokinase;protein_id=WP_000226838.1;transl_table=11 NZ_CP075116.1 RefSeq gene 952317 952673 . + . ID=gene-CCO40_RS04555;Name=CCO40_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04555;old_locus_tag=CCO40_04555 NZ_CP075116.1 Protein Homology CDS 952317 952673 . + 0 ID=cds-WP_000480218.1;Parent=gene-CCO40_RS04555;Dbxref=GenBank:WP_000480218.1;Name=WP_000480218.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461876.3;locus_tag=CCO40_RS04555;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_000480218.1;transl_table=11 NZ_CP075116.1 RefSeq gene 952639 952935 . + . ID=gene-CCO40_RS04560;Name=CCO40_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04560;old_locus_tag=CCO40_04560 NZ_CP075116.1 Protein Homology CDS 952639 952935 . + 0 ID=cds-WP_001532579.1;Parent=gene-CCO40_RS04560;Dbxref=GenBank:WP_001532579.1;Name=WP_001532579.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532579.1;locus_tag=CCO40_RS04560;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001532579.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 952954 953097 . - . ID=gene-CCO40_RS22415;Name=CCO40_RS22415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22415;partial=true;pseudo=true;start_range=.,952954 NZ_CP075116.1 Protein Homology CDS 952954 953097 . - 0 ID=cds-CCO40_RS22415;Parent=gene-CCO40_RS22415;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=CCO40_RS22415;partial=true;product=fimbrial protein;pseudo=true;start_range=.,952954;transl_table=11 NZ_CP075116.1 RefSeq gene 953703 954503 . + . ID=gene-CCO40_RS04565;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=CCO40_RS04565;old_locus_tag=CCO40_04565 NZ_CP075116.1 Protein Homology CDS 953703 954503 . + 0 ID=cds-WP_000210449.1;Parent=gene-CCO40_RS04565;Dbxref=GenBank:WP_000210449.1;Name=WP_000210449.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461875.1;locus_tag=CCO40_RS04565;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_000210449.1;transl_table=11 NZ_CP075116.1 RefSeq gene 954731 956368 . + . ID=gene-CCO40_RS04570;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=CCO40_RS04570;old_locus_tag=CCO40_04570 NZ_CP075116.1 Protein Homology CDS 954731 956368 . + 0 ID=cds-WP_000210863.1;Parent=gene-CCO40_RS04570;Dbxref=GenBank:WP_000210863.1;Name=WP_000210863.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=CCO40_RS04570;product=glutamine hydrolyzing CTP synthase;protein_id=WP_000210863.1;transl_table=11 NZ_CP075116.1 RefSeq gene 956451 957749 . + . ID=gene-CCO40_RS04575;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=CCO40_RS04575;old_locus_tag=CCO40_04575 NZ_CP075116.1 Protein Homology CDS 956451 957749 . + 0 ID=cds-WP_000036734.1;Parent=gene-CCO40_RS04575;Dbxref=GenBank:WP_000036734.1;Name=WP_000036734.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=CCO40_RS04575;product=phosphopyruvate hydratase;protein_id=WP_000036734.1;transl_table=11 NZ_CP075116.1 RefSeq gene 957885 958556 . + . ID=gene-CCO40_RS04580;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=CCO40_RS04580;old_locus_tag=CCO40_04580 NZ_CP075116.1 Protein Homology CDS 957885 958556 . + 0 ID=cds-WP_001199961.1;Parent=gene-CCO40_RS04580;Dbxref=GenBank:WP_001199961.1;Name=WP_001199961.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=CCO40_RS04580;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199961.1;transl_table=11 NZ_CP075116.1 RefSeq direct_repeat 958853 960102 . + . ID=id-NZ_CP075116.1:958853..960102;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=958853..958881;rpt_unit_seq=gtgttccccgcgccagcggggataaaccg NZ_CP075116.1 RefSeq gene 960261 961058 . + . ID=gene-CCO40_RS04585;Name=CCO40_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04585;old_locus_tag=CCO40_04585 NZ_CP075116.1 Protein Homology CDS 960261 961058 . + 0 ID=cds-WP_058144919.1;Parent=gene-CCO40_RS04585;Dbxref=GenBank:WP_058144919.1;Name=WP_058144919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=CCO40_RS04585;product=MBL fold metallo-hydrolase;protein_id=WP_058144919.1;transl_table=11 NZ_CP075116.1 RefSeq gene 961146 961508 . - . ID=gene-CCO40_RS04590;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=CCO40_RS04590;old_locus_tag=CCO40_04590 NZ_CP075116.1 Protein Homology CDS 961146 961508 . - 0 ID=cds-WP_000108313.1;Parent=gene-CCO40_RS04590;Dbxref=GenBank:WP_000108313.1;Name=WP_000108313.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461870.1;locus_tag=CCO40_RS04590;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108313.1;transl_table=11 NZ_CP075116.1 RefSeq gene 961932 963731 . + . ID=gene-CCO40_RS04595;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=CCO40_RS04595;old_locus_tag=CCO40_04595 NZ_CP075116.1 Protein Homology CDS 961932 963731 . + 0 ID=cds-WP_094889090.1;Parent=gene-CCO40_RS04595;Dbxref=GenBank:WP_094889090.1;Name=WP_094889090.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461869.1;locus_tag=CCO40_RS04595;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_094889090.1;transl_table=11 NZ_CP075116.1 RefSeq gene 963731 965443 . + . ID=gene-CCO40_RS04600;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=CCO40_RS04600;old_locus_tag=CCO40_04600 NZ_CP075116.1 Protein Homology CDS 963731 965443 . + 0 ID=cds-WP_094889091.1;Parent=gene-CCO40_RS04600;Dbxref=GenBank:WP_094889091.1;Name=WP_094889091.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=CCO40_RS04600;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_094889091.1;transl_table=11 NZ_CP075116.1 RefSeq gene 965519 966253 . + . ID=gene-CCO40_RS04605;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=CCO40_RS04605;old_locus_tag=CCO40_04605 NZ_CP075116.1 Protein Homology CDS 965519 966253 . + 0 ID=cds-WP_001645986.1;Parent=gene-CCO40_RS04605;Dbxref=GenBank:WP_001645986.1;Name=WP_001645986.1;Ontology_term=GO:0000103,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461867.1;locus_tag=CCO40_RS04605;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_001645986.1;transl_table=11 NZ_CP075116.1 RefSeq gene 966466 967419 . - . ID=gene-CCO40_RS04610;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=protein_coding;locus_tag=CCO40_RS04610;old_locus_tag=CCO40_04610 NZ_CP075116.1 Protein Homology CDS 966466 967419 . - 0 ID=cds-WP_094889111.1;Parent=gene-CCO40_RS04610;Dbxref=GenBank:WP_094889111.1;Name=WP_094889111.1;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441126.1;locus_tag=CCO40_RS04610;product=SPI-1 type III secretion system effector SopD;protein_id=WP_094889111.1;transl_table=11 NZ_CP075116.1 RefSeq gene 967863 970526 . + . ID=gene-CCO40_RS04615;Name=CCO40_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04615;old_locus_tag=CCO40_04615 NZ_CP075116.1 Protein Homology CDS 967863 970526 . + 0 ID=cds-WP_094889092.1;Parent=gene-CCO40_RS04615;Dbxref=GenBank:WP_094889092.1;Name=WP_094889092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461865.1;locus_tag=CCO40_RS04615;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=WP_094889092.1;transl_table=11 NZ_CP075116.1 RefSeq gene 970538 972094 . + . ID=gene-CCO40_RS04620;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;gene_synonym=cse1;locus_tag=CCO40_RS04620;old_locus_tag=CCO40_04620 NZ_CP075116.1 Protein Homology CDS 970538 972094 . + 0 ID=cds-WP_094889093.1;Parent=gene-CCO40_RS04620;Dbxref=GenBank:WP_094889093.1;Name=WP_094889093.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461864.1;locus_tag=CCO40_RS04620;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WP_094889093.1;transl_table=11 NZ_CP075116.1 RefSeq gene 972091 972651 . + . ID=gene-CCO40_RS04625;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;gene_synonym=cse2;locus_tag=CCO40_RS04625;old_locus_tag=CCO40_04625 NZ_CP075116.1 Protein Homology CDS 972091 972651 . + 0 ID=cds-WP_000117946.1;Parent=gene-CCO40_RS04625;Dbxref=GenBank:WP_000117946.1;Name=WP_000117946.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casB;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461863.1;locus_tag=CCO40_RS04625;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WP_000117946.1;transl_table=11 NZ_CP075116.1 RefSeq gene 972665 973723 . + . ID=gene-CCO40_RS04630;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=CCO40_RS04630;old_locus_tag=CCO40_04630 NZ_CP075116.1 Protein Homology CDS 972665 973723 . + 0 ID=cds-WP_023993664.1;Parent=gene-CCO40_RS04630;Dbxref=GenBank:WP_023993664.1;Name=WP_023993664.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas7e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461862.1;locus_tag=CCO40_RS04630;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WP_023993664.1;transl_table=11 NZ_CP075116.1 RefSeq gene 973734 974480 . + . ID=gene-CCO40_RS04635;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=CCO40_RS04635;old_locus_tag=CCO40_04635 NZ_CP075116.1 Protein Homology CDS 973734 974480 . + 0 ID=cds-WP_094889094.1;Parent=gene-CCO40_RS04635;Dbxref=GenBank:WP_094889094.1;Name=WP_094889094.1;Ontology_term=GO:0043571,GO:0051607,GO:0003723;gbkey=CDS;gene=cas5e;go_function=RNA binding|0003723||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461861.1;locus_tag=CCO40_RS04635;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WP_094889094.1;transl_table=11 NZ_CP075116.1 RefSeq gene 974462 975112 . + . ID=gene-CCO40_RS04640;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=CCO40_RS04640;old_locus_tag=CCO40_04640 NZ_CP075116.1 Protein Homology CDS 974462 975112 . + 0 ID=cds-WP_094889095.1;Parent=gene-CCO40_RS04640;Dbxref=GenBank:WP_094889095.1;Name=WP_094889095.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas6e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461860.1;locus_tag=CCO40_RS04640;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WP_094889095.1;transl_table=11 NZ_CP075116.1 RefSeq gene 975109 976029 . + . ID=gene-CCO40_RS04645;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=CCO40_RS04645;old_locus_tag=CCO40_04645 NZ_CP075116.1 Protein Homology CDS 975109 976029 . + 0 ID=cds-WP_023207171.1;Parent=gene-CCO40_RS04645;Dbxref=GenBank:WP_023207171.1;Name=WP_023207171.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461859.1;locus_tag=CCO40_RS04645;product=type I-E CRISPR-associated endonuclease Cas1e;protein_id=WP_023207171.1;transl_table=11 NZ_CP075116.1 RefSeq gene 976029 976322 . + . ID=gene-CCO40_RS04650;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=CCO40_RS04650;old_locus_tag=CCO40_04650 NZ_CP075116.1 Protein Homology CDS 976029 976322 . + 0 ID=cds-WP_001518648.1;Parent=gene-CCO40_RS04650;Dbxref=GenBank:WP_001518648.1;Name=WP_001518648.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311635.1;locus_tag=CCO40_RS04650;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WP_001518648.1;transl_table=11 NZ_CP075116.1 RefSeq direct_repeat 976419 977669 . + . ID=id-NZ_CP075116.1:976419..977669;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=976419..976447;rpt_unit_seq=gtgttccccgcgccagcggggataaaccg NZ_CP075116.1 RefSeq direct_repeat 977743 978259 . + . ID=id-NZ_CP075116.1:977743..978259;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=977743..977771;rpt_unit_seq=gtgttccccgcgccagcggggataaaccg NZ_CP075116.1 RefSeq gene 978274 979320 . - . ID=gene-CCO40_RS04655;Name=CCO40_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04655;old_locus_tag=CCO40_04655 NZ_CP075116.1 Protein Homology CDS 978274 979320 . - 0 ID=cds-WP_000490481.1;Parent=gene-CCO40_RS04655;Dbxref=GenBank:WP_000490481.1;Name=WP_000490481.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461857.1;locus_tag=CCO40_RS04655;product=aminopeptidase;protein_id=WP_000490481.1;transl_table=11 NZ_CP075116.1 RefSeq gene 979571 980479 . + . ID=gene-CCO40_RS04660;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=CCO40_RS04660;old_locus_tag=CCO40_04660 NZ_CP075116.1 Protein Homology CDS 979571 980479 . + 0 ID=cds-WP_000372384.1;Parent=gene-CCO40_RS04660;Dbxref=GenBank:WP_000372384.1;Name=WP_000372384.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=CCO40_RS04660;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372384.1;transl_table=11 NZ_CP075116.1 RefSeq gene 980489 981928 . + . ID=gene-CCO40_RS04665;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=CCO40_RS04665;old_locus_tag=CCO40_04665 NZ_CP075116.1 Protein Homology CDS 980489 981928 . + 0 ID=cds-WP_094889096.1;Parent=gene-CCO40_RS04665;Dbxref=GenBank:WP_094889096.1;Name=WP_094889096.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461855.1;locus_tag=CCO40_RS04665;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_094889096.1;transl_table=11 NZ_CP075116.1 RefSeq gene 981915 982520 . + . ID=gene-CCO40_RS04670;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=CCO40_RS04670;old_locus_tag=CCO40_04670 NZ_CP075116.1 Protein Homology CDS 981915 982520 . + 0 ID=cds-WP_094889097.1;Parent=gene-CCO40_RS04670;Dbxref=GenBank:WP_094889097.1;Name=WP_094889097.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461854.1;locus_tag=CCO40_RS04670;product=adenylyl-sulfate kinase;protein_id=WP_094889097.1;transl_table=11 NZ_CP075116.1 RefSeq gene 982571 982894 . + . ID=gene-CCO40_RS04675;Name=CCO40_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04675;old_locus_tag=CCO40_04675 NZ_CP075116.1 Protein Homology CDS 982571 982894 . + 0 ID=cds-WP_001537530.1;Parent=gene-CCO40_RS04675;Dbxref=GenBank:WP_001537530.1;Name=WP_001537530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246104.1;locus_tag=CCO40_RS04675;product=DUF3561 family protein;protein_id=WP_001537530.1;transl_table=11 NZ_CP075116.1 RefSeq gene 983085 983396 . + . ID=gene-CCO40_RS04680;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=CCO40_RS04680;old_locus_tag=CCO40_04680 NZ_CP075116.1 Protein Homology CDS 983085 983396 . + 0 ID=cds-WP_000517480.1;Parent=gene-CCO40_RS04680;Dbxref=GenBank:WP_000517480.1;Name=WP_000517480.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461852.1;locus_tag=CCO40_RS04680;product=cell division protein FtsB;protein_id=WP_000517480.1;transl_table=11 NZ_CP075116.1 RefSeq gene 983415 984125 . + . ID=gene-CCO40_RS04685;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=CCO40_RS04685;old_locus_tag=CCO40_04685 NZ_CP075116.1 Protein Homology CDS 983415 984125 . + 0 ID=cds-WP_000741649.1;Parent=gene-CCO40_RS04685;Dbxref=GenBank:WP_000741649.1;Name=WP_000741649.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461851.1;locus_tag=CCO40_RS04685;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_000741649.1;transl_table=11 NZ_CP075116.1 RefSeq gene 984125 984604 . + . ID=gene-CCO40_RS04690;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=CCO40_RS04690;old_locus_tag=CCO40_04690 NZ_CP075116.1 Protein Homology CDS 984125 984604 . + 0 ID=cds-WP_001219244.1;Parent=gene-CCO40_RS04690;Dbxref=GenBank:WP_001219244.1;Name=WP_001219244.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461850.1;locus_tag=CCO40_RS04690;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219244.1;transl_table=11 NZ_CP075116.1 RefSeq gene 984601 985650 . + . ID=gene-CCO40_RS04695;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=CCO40_RS04695;old_locus_tag=CCO40_04695 NZ_CP075116.1 Protein Homology CDS 984601 985650 . + 0 ID=cds-WP_000134250.1;Parent=gene-CCO40_RS04695;Dbxref=GenBank:WP_000134250.1;Name=WP_000134250.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461849.1;locus_tag=CCO40_RS04695;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_000134250.1;transl_table=11 NZ_CP075116.1 RefSeq gene 985631 986392 . + . ID=gene-CCO40_RS04700;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=CCO40_RS04700;old_locus_tag=CCO40_04700 NZ_CP075116.1 Protein Homology CDS 985631 986392 . + 0 ID=cds-WP_001221538.1;Parent=gene-CCO40_RS04700;Dbxref=GenBank:WP_001221538.1;Name=WP_001221538.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461848.1;locus_tag=CCO40_RS04700;product=5'/3'-nucleotidase SurE;protein_id=WP_001221538.1;transl_table=11 NZ_CP075116.1 RefSeq gene 986386 987012 . + . ID=gene-CCO40_RS04705;Name=CCO40_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04705;old_locus_tag=CCO40_04705 NZ_CP075116.1 Protein Homology CDS 986386 987012 . + 0 ID=cds-WP_000253545.1;Parent=gene-CCO40_RS04705;Dbxref=GenBank:WP_000253545.1;Name=WP_000253545.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=CCO40_RS04705;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_000253545.1;transl_table=11 NZ_CP075116.1 RefSeq gene 987151 987309 . - . ID=gene-CCO40_RS22420;Name=CCO40_RS22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22420 NZ_CP075116.1 Protein Homology CDS 987151 987309 . - 0 ID=cds-WP_223148970.1;Parent=gene-CCO40_RS22420;Dbxref=GenBank:WP_223148970.1;Name=WP_223148970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541719.1;locus_tag=CCO40_RS22420;product=peptidase;protein_id=WP_223148970.1;transl_table=11 NZ_CP075116.1 RefSeq gene 987239 988321 . + . ID=gene-CCO40_RS04710;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=CCO40_RS04710;old_locus_tag=CCO40_04710 NZ_CP075116.1 Protein Homology CDS 987239 988321 . + 0 ID=cds-WP_237219222.1;Parent=gene-CCO40_RS04710;Dbxref=GenBank:WP_237219222.1;Name=WP_237219222.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=CCO40_RS04710;product=murein hydrolase activator NlpD;protein_id=WP_237219222.1;transl_table=11 NZ_CP075116.1 RefSeq gene 988384 989376 . + . ID=gene-CCO40_RS04715;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=CCO40_RS04715;old_locus_tag=CCO40_04715 NZ_CP075116.1 Protein Homology CDS 988384 989376 . + 0 ID=cds-WP_000081498.1;Parent=gene-CCO40_RS04715;Dbxref=GenBank:WP_000081498.1;Name=WP_000081498.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=CCO40_RS04715;product=RNA polymerase sigma factor RpoS;protein_id=WP_000081498.1;transl_table=11 NZ_CP075116.1 RefSeq gene 989421 989657 . - . ID=gene-CCO40_RS04720;Name=CCO40_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04720;old_locus_tag=CCO40_04720 NZ_CP075116.1 Protein Homology CDS 989421 989657 . - 0 ID=cds-WP_000562964.1;Parent=gene-CCO40_RS04720;Dbxref=GenBank:WP_000562964.1;Name=WP_000562964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461844.1;locus_tag=CCO40_RS04720;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=WP_000562964.1;transl_table=11 NZ_CP075116.1 RefSeq gene 989668 991095 . - . ID=gene-CCO40_RS04725;Name=CCO40_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04725;old_locus_tag=CCO40_04725 NZ_CP075116.1 Protein Homology CDS 989668 991095 . - 0 ID=cds-WP_000863168.1;Parent=gene-CCO40_RS04725;Dbxref=GenBank:WP_000863168.1;Name=WP_000863168.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461843.1;locus_tag=CCO40_RS04725;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=WP_000863168.1;transl_table=11 NZ_CP075116.1 RefSeq gene 991095 991688 . - . ID=gene-CCO40_RS04730;Name=CCO40_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04730;old_locus_tag=CCO40_04730 NZ_CP075116.1 Protein Homology CDS 991095 991688 . - 0 ID=cds-WP_001237180.1;Parent=gene-CCO40_RS04730;Dbxref=GenBank:WP_001237180.1;Name=WP_001237180.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461842.1;locus_tag=CCO40_RS04730;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=WP_001237180.1;transl_table=11 NZ_CP075116.1 RefSeq gene 991859 992263 . + . ID=gene-CCO40_RS04735;Name=CCO40_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04735;old_locus_tag=CCO40_04735 NZ_CP075116.1 Protein Homology CDS 991859 992263 . + 0 ID=cds-WP_000423338.1;Parent=gene-CCO40_RS04735;Dbxref=GenBank:WP_000423338.1;Name=WP_000423338.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461841.1;locus_tag=CCO40_RS04735;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_000423338.1;transl_table=11 NZ_CP075116.1 RefSeq gene 992282 993046 . - . ID=gene-CCO40_RS04740;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=CCO40_RS04740;old_locus_tag=CCO40_04740 NZ_CP075116.1 Protein Homology CDS 992282 993046 . - 0 ID=cds-WP_000613185.1;Parent=gene-CCO40_RS04740;Dbxref=GenBank:WP_000613185.1;Name=WP_000613185.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461840.1;locus_tag=CCO40_RS04740;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_000613185.1;transl_table=11 NZ_CP075116.1 RefSeq gene 993243 994166 . + . ID=gene-CCO40_RS04745;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=CCO40_RS04745;old_locus_tag=CCO40_04745 NZ_CP075116.1 Protein Homology CDS 993243 994166 . + 0 ID=cds-WP_000206951.1;Parent=gene-CCO40_RS04745;Dbxref=GenBank:WP_000206951.1;Name=WP_000206951.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461839.1;locus_tag=CCO40_RS04745;product=L-threonate dehydrogenase;protein_id=WP_000206951.1;transl_table=11 NZ_CP075116.1 RefSeq gene 994160 995422 . + . ID=gene-CCO40_RS04750;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=CCO40_RS04750;old_locus_tag=CCO40_04750 NZ_CP075116.1 Protein Homology CDS 994160 995422 . + 0 ID=cds-WP_000912500.1;Parent=gene-CCO40_RS04750;Dbxref=GenBank:WP_000912500.1;Name=WP_000912500.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=CCO40_RS04750;product=3-oxo-tetronate kinase;protein_id=WP_000912500.1;transl_table=11 NZ_CP075116.1 RefSeq gene 995419 996057 . + . ID=gene-CCO40_RS04755;Name=otnC;gbkey=Gene;gene=otnC;gene_biotype=protein_coding;locus_tag=CCO40_RS04755;old_locus_tag=CCO40_04755 NZ_CP075116.1 Protein Homology CDS 995419 996057 . + 0 ID=cds-WP_094889099.1;Parent=gene-CCO40_RS04755;Dbxref=GenBank:WP_094889099.1;Name=WP_094889099.1;Ontology_term=GO:0005996,GO:0016829;gbkey=CDS;gene=otnC;go_function=lyase activity|0016829||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461837.1;locus_tag=CCO40_RS04755;product=3-oxo-tetronate 4-phosphate decarboxylase;protein_id=WP_094889099.1;transl_table=11 NZ_CP075116.1 RefSeq gene 996062 996838 . + . ID=gene-CCO40_RS04760;Name=CCO40_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04760;old_locus_tag=CCO40_04760 NZ_CP075116.1 Protein Homology CDS 996062 996838 . + 0 ID=cds-WP_001136887.1;Parent=gene-CCO40_RS04760;Dbxref=GenBank:WP_001136887.1;Name=WP_001136887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461836.1;locus_tag=CCO40_RS04760;product=HPr family phosphocarrier protein;protein_id=WP_001136887.1;transl_table=11 NZ_CP075116.1 RefSeq gene 996878 997828 . + . ID=gene-CCO40_RS04765;Name=denD;gbkey=Gene;gene=denD;gene_biotype=protein_coding;locus_tag=CCO40_RS04765;old_locus_tag=CCO40_04765 NZ_CP075116.1 Protein Homology CDS 996878 997828 . + 0 ID=cds-WP_001165731.1;Parent=gene-CCO40_RS04765;Dbxref=GenBank:WP_001165731.1;Name=WP_001165731.1;Ontology_term=GO:0005975,GO:0016491;gbkey=CDS;gene=denD;go_function=oxidoreductase activity|0016491||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461835.1;locus_tag=CCO40_RS04765;product=D-erythronate dehydrogenase;protein_id=WP_001165731.1;transl_table=11 NZ_CP075116.1 RefSeq gene 997825 999321 . + . ID=gene-CCO40_RS04770;Name=CCO40_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04770;old_locus_tag=CCO40_04770 NZ_CP075116.1 Protein Homology CDS 997825 999321 . + 0 ID=cds-WP_000202725.1;Parent=gene-CCO40_RS04770;Dbxref=GenBank:WP_000202725.1;Name=WP_000202725.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461834.1;locus_tag=CCO40_RS04770;product=GntP family permease;protein_id=WP_000202725.1;transl_table=11 NZ_CP075116.1 RefSeq gene 999363 1000295 . - . ID=gene-CCO40_RS04775;Name=CCO40_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04775;old_locus_tag=CCO40_04775 NZ_CP075116.1 Protein Homology CDS 999363 1000295 . - 0 ID=cds-WP_000216297.1;Parent=gene-CCO40_RS04775;Dbxref=GenBank:WP_000216297.1;Name=WP_000216297.1;Ontology_term=GO:0006355,GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461833.1;locus_tag=CCO40_RS04775;product=LysR family transcriptional regulator;protein_id=WP_000216297.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1000383 1001591 . + . ID=gene-CCO40_RS04780;Name=CCO40_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04780;old_locus_tag=CCO40_04780 NZ_CP075116.1 Protein Homology CDS 1000383 1001591 . + 0 ID=cds-WP_094889100.1;Parent=gene-CCO40_RS04780;Dbxref=GenBank:WP_094889100.1;Name=WP_094889100.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461832.1;locus_tag=CCO40_RS04780;product=MFS transporter;protein_id=WP_094889100.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1001588 1001968 . + . ID=gene-CCO40_RS04785;Name=CCO40_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04785;old_locus_tag=CCO40_04785 NZ_CP075116.1 Protein Homology CDS 1001588 1001968 . + 0 ID=cds-WP_052932524.1;Parent=gene-CCO40_RS04785;Dbxref=GenBank:WP_052932524.1;Name=WP_052932524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=CCO40_RS04785;product=DUF4440 domain-containing protein;protein_id=WP_052932524.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1002024 1004591 . - . ID=gene-CCO40_RS04790;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=CCO40_RS04790;old_locus_tag=CCO40_04790 NZ_CP075116.1 Protein Homology CDS 1002024 1004591 . - 0 ID=cds-WP_001005802.1;Parent=gene-CCO40_RS04790;Dbxref=GenBank:WP_001005802.1;Name=WP_001005802.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461830.1;locus_tag=CCO40_RS04790;product=DNA mismatch repair protein MutS;protein_id=WP_001005802.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1004750 1005271 . + . ID=gene-CCO40_RS04795;Name=CCO40_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04795;old_locus_tag=CCO40_04795 NZ_CP075116.1 Protein Homology CDS 1004750 1005271 . + 0 ID=cds-WP_094889101.1;Parent=gene-CCO40_RS04795;Dbxref=GenBank:WP_094889101.1;Name=WP_094889101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=CCO40_RS04795;product=cytoplasmic protein;protein_id=WP_094889101.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1005443 1006099 . - . ID=gene-CCO40_RS04800;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=CCO40_RS04800;old_locus_tag=CCO40_04800 NZ_CP075116.1 Protein Homology CDS 1005443 1006099 . - 0 ID=cds-WP_000420452.1;Parent=gene-CCO40_RS04800;Dbxref=GenBank:WP_000420452.1;Name=WP_000420452.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461828.1;locus_tag=CCO40_RS04800;product=protein-serine/threonine phosphatase;protein_id=WP_000420452.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1006437 1006651 . + . ID=gene-CCO40_RS04805;Name=CCO40_RS04805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS04805;old_locus_tag=CCO40_04805;partial=true;pseudo=true;start_range=.,1006437 NZ_CP075116.1 Protein Homology CDS 1006437 1006651 . + 0 ID=cds-CCO40_RS04805;Parent=gene-CCO40_RS04805;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011791210.1;locus_tag=CCO40_RS04805;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1006437;transl_table=11 NZ_CP075116.1 RefSeq gene 1006724 1007251 . - . ID=gene-CCO40_RS04810;Name=CCO40_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04810;old_locus_tag=CCO40_04810 NZ_CP075116.1 Protein Homology CDS 1006724 1007251 . - 0 ID=cds-WP_000971655.1;Parent=gene-CCO40_RS04810;Dbxref=GenBank:WP_000971655.1;Name=WP_000971655.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461826.1;locus_tag=CCO40_RS04810;product=GNAT family N-acetyltransferase;protein_id=WP_000971655.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1007248 1007538 . - . ID=gene-CCO40_RS04815;Name=CCO40_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04815;old_locus_tag=CCO40_04815 NZ_CP075116.1 Protein Homology CDS 1007248 1007538 . - 0 ID=cds-WP_000855692.1;Parent=gene-CCO40_RS04815;Dbxref=GenBank:WP_000855692.1;Name=WP_000855692.1;Ontology_term=GO:0006355,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461825.1;locus_tag=CCO40_RS04815;product=type II toxin-antitoxin system TacA family antitoxin;protein_id=WP_000855692.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1007808 1007986 . - . ID=gene-CCO40_RS04820;Name=CCO40_RS04820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS04820;old_locus_tag=CCO40_04820;partial=true;pseudo=true;start_range=.,1007808 NZ_CP075116.1 Protein Homology CDS 1007808 1007986 . - 0 ID=cds-CCO40_RS04820;Parent=gene-CCO40_RS04820;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612101.1;locus_tag=CCO40_RS04820;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1007808;transl_table=11 NZ_CP075116.1 RefSeq gene 1008227 1008553 . + . ID=gene-CCO40_RS04825;Name=CCO40_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04825;old_locus_tag=CCO40_04825 NZ_CP075116.1 Protein Homology CDS 1008227 1008553 . + 0 ID=cds-WP_000393302.1;Parent=gene-CCO40_RS04825;Dbxref=GenBank:WP_000393302.1;Name=WP_000393302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461824.1;locus_tag=CCO40_RS04825;product=hypothetical protein;protein_id=WP_000393302.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1008826 1009173 . - . ID=gene-CCO40_RS04830;Name=CCO40_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04830;old_locus_tag=CCO40_04830 NZ_CP075116.1 Protein Homology CDS 1008826 1009173 . - 0 ID=cds-WP_001669174.1;Parent=gene-CCO40_RS04830;Dbxref=GenBank:WP_001669174.1;Name=WP_001669174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461823.1;locus_tag=CCO40_RS04830;product=DUF1493 family protein;protein_id=WP_001669174.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1009158 1009607 . - . ID=gene-CCO40_RS04835;Name=CCO40_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04835;old_locus_tag=CCO40_04835 NZ_CP075116.1 Protein Homology CDS 1009158 1009607 . - 0 ID=cds-WP_000381617.1;Parent=gene-CCO40_RS04835;Dbxref=GenBank:WP_000381617.1;Name=WP_000381617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461822.1;locus_tag=CCO40_RS04835;product=STM2901 family protein;protein_id=WP_000381617.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1010039 1010482 . - . ID=gene-CCO40_RS04840;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=CCO40_RS04840;old_locus_tag=CCO40_04840 NZ_CP075116.1 Protein Homology CDS 1010039 1010482 . - 0 ID=cds-WP_094889102.1;Parent=gene-CCO40_RS04840;Dbxref=GenBank:WP_094889102.1;Name=WP_094889102.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461821.1;locus_tag=CCO40_RS04840;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=WP_094889102.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1010939 1011589 . + . ID=gene-CCO40_RS04845;Name=invF;gbkey=Gene;gene=invF;gene_biotype=protein_coding;locus_tag=CCO40_RS04845;old_locus_tag=CCO40_04845 NZ_CP075116.1 Protein Homology CDS 1010939 1011589 . + 0 ID=cds-WP_001674874.1;Parent=gene-CCO40_RS04845;Dbxref=GenBank:WP_001674874.1;Name=WP_001674874.1;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461820.1;locus_tag=CCO40_RS04845;product=type III secretion system transcriptional activator InvF;protein_id=WP_001674874.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1011586 1013274 . + . ID=gene-CCO40_RS04850;Name=invG;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=CCO40_RS04850;old_locus_tag=CCO40_04850 NZ_CP075116.1 Protein Homology CDS 1011586 1013274 . + 0 ID=cds-WP_000848099.1;Parent=gene-CCO40_RS04850;Dbxref=GenBank:WP_000848099.1;Name=WP_000848099.1;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461819.1;locus_tag=CCO40_RS04850;product=type III secretion system outer membrane ring protein InvG;protein_id=WP_000848099.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1013271 1014389 . + . ID=gene-CCO40_RS04855;Name=invE;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=CCO40_RS04855;old_locus_tag=CCO40_04855 NZ_CP075116.1 Protein Homology CDS 1013271 1014389 . + 0 ID=cds-WP_000612171.1;Parent=gene-CCO40_RS04855;Dbxref=GenBank:WP_000612171.1;Name=WP_000612171.1;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461818.1;locus_tag=CCO40_RS04855;product=type III secretion system gatekeeper InvE;protein_id=WP_000612171.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1014414 1016471 . + . ID=gene-CCO40_RS04860;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=CCO40_RS04860;old_locus_tag=CCO40_04860 NZ_CP075116.1 Protein Homology CDS 1014414 1016471 . + 0 ID=cds-WP_000927220.1;Parent=gene-CCO40_RS04860;Dbxref=GenBank:WP_000927220.1;Name=WP_000927220.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461817.1;locus_tag=CCO40_RS04860;product=type III secretion system export apparatus protein InvA;protein_id=WP_000927220.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1016495 1016902 . + . ID=gene-CCO40_RS04865;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=protein_coding;locus_tag=CCO40_RS04865;old_locus_tag=CCO40_04865 NZ_CP075116.1 Protein Homology CDS 1016495 1016902 . + 0 ID=cds-WP_001164066.1;Parent=gene-CCO40_RS04865;Dbxref=GenBank:WP_001164066.1;Name=WP_001164066.1;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461816.1;locus_tag=CCO40_RS04865;product=SPI-1 type III secretion system chaperone SpaK;protein_id=WP_001164066.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1016899 1018194 . + . ID=gene-CCO40_RS04870;Name=invC;gbkey=Gene;gene=invC;gene_biotype=protein_coding;locus_tag=CCO40_RS04870;old_locus_tag=CCO40_04870 NZ_CP075116.1 Protein Homology CDS 1016899 1018194 . + 0 ID=cds-WP_000856766.1;Parent=gene-CCO40_RS04870;Dbxref=GenBank:WP_000856766.1;Name=WP_000856766.1;gbkey=CDS;gene=invC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461815.1;locus_tag=CCO40_RS04870;product=SctN family type III secretion system ATPase InvC;protein_id=WP_000856766.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1018172 1018615 . + . ID=gene-CCO40_RS04875;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=CCO40_RS04875;old_locus_tag=CCO40_04875 NZ_CP075116.1 Protein Homology CDS 1018172 1018615 . + 0 ID=cds-WP_001520714.1;Parent=gene-CCO40_RS04875;Dbxref=GenBank:WP_001520714.1;Name=WP_001520714.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461814.1;locus_tag=CCO40_RS04875;product=SPI-1 type III secretion system protein SpaM;protein_id=WP_001520714.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1018615 1019625 . + . ID=gene-CCO40_RS04880;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=protein_coding;locus_tag=CCO40_RS04880;old_locus_tag=CCO40_04880 NZ_CP075116.1 Protein Homology CDS 1018615 1019625 . + 0 ID=cds-WP_000503085.1;Parent=gene-CCO40_RS04880;Dbxref=GenBank:WP_000503085.1;Name=WP_000503085.1;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461813.1;locus_tag=CCO40_RS04880;product=SPI-1 type III secretion system protein SpaN;protein_id=WP_000503085.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1019625 1020536 . + . ID=gene-CCO40_RS04885;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=CCO40_RS04885;old_locus_tag=CCO40_04885 NZ_CP075116.1 Protein Homology CDS 1019625 1020536 . + 0 ID=cds-WP_000058739.1;Parent=gene-CCO40_RS04885;Dbxref=GenBank:WP_000058739.1;Name=WP_000058739.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=CCO40_RS04885;product=SPI-1 type III secretion system protein SpaO;protein_id=WP_000058739.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1020526 1021200 . + . ID=gene-CCO40_RS04890;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=CCO40_RS04890;old_locus_tag=CCO40_04890 NZ_CP075116.1 Protein Homology CDS 1020526 1021200 . + 0 ID=cds-WP_000526016.1;Parent=gene-CCO40_RS04890;Dbxref=GenBank:WP_000526016.1;Name=WP_000526016.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461811.1;locus_tag=CCO40_RS04890;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=WP_000526016.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1021226 1021486 . + . ID=gene-CCO40_RS04895;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=CCO40_RS04895;old_locus_tag=CCO40_04895 NZ_CP075116.1 Protein Homology CDS 1021226 1021486 . + 0 ID=cds-WP_000342503.1;Parent=gene-CCO40_RS04895;Dbxref=GenBank:WP_000342503.1;Name=WP_000342503.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461810.1;locus_tag=CCO40_RS04895;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=WP_000342503.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1021490 1022281 . + . ID=gene-CCO40_RS04900;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=CCO40_RS04900;old_locus_tag=CCO40_04900 NZ_CP075116.1 Protein Homology CDS 1021490 1022281 . + 0 ID=cds-WP_000498965.1;Parent=gene-CCO40_RS04900;Dbxref=GenBank:WP_000498965.1;Name=WP_000498965.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461809.1;locus_tag=CCO40_RS04900;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=WP_000498965.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1022268 1023338 . + . ID=gene-CCO40_RS04905;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=protein_coding;locus_tag=CCO40_RS04905;old_locus_tag=CCO40_04905 NZ_CP075116.1 Protein Homology CDS 1022268 1023338 . + 0 ID=cds-WP_000097719.1;Parent=gene-CCO40_RS04905;Dbxref=GenBank:WP_000097719.1;Name=WP_000097719.1;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461808.1;locus_tag=CCO40_RS04905;product=SPI-1 type III secretion system export apparatus protein SpaS;protein_id=WP_000097719.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1023476 1023973 . + . ID=gene-CCO40_RS04910;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=CCO40_RS04910;old_locus_tag=CCO40_04910 NZ_CP075116.1 Protein Homology CDS 1023476 1023973 . + 0 ID=cds-WP_000386309.1;Parent=gene-CCO40_RS04910;Dbxref=GenBank:WP_000386309.1;Name=WP_000386309.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461807.1;locus_tag=CCO40_RS04910;product=SycD/LcrH family type III secretion system chaperone SicA;protein_id=WP_000386309.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1023976 1025757 . + . ID=gene-CCO40_RS04915;Name=sipB;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=CCO40_RS04915;old_locus_tag=CCO40_04915 NZ_CP075116.1 Protein Homology CDS 1023976 1025757 . + 0 ID=cds-WP_000245788.1;Parent=gene-CCO40_RS04915;Dbxref=GenBank:WP_000245788.1;Name=WP_000245788.1;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461806.1;locus_tag=CCO40_RS04915;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=WP_000245788.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1025785 1027014 . + . ID=gene-CCO40_RS04920;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=protein_coding;locus_tag=CCO40_RS04920;old_locus_tag=CCO40_04920 NZ_CP075116.1 Protein Homology CDS 1025785 1027014 . + 0 ID=cds-WP_000909019.1;Parent=gene-CCO40_RS04920;Dbxref=GenBank:WP_000909019.1;Name=WP_000909019.1;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461805.1;locus_tag=CCO40_RS04920;product=SPI-1 type III secretion system needle tip complex protein SipC;protein_id=WP_000909019.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1027085 1028116 . + . ID=gene-CCO40_RS04925;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=CCO40_RS04925;old_locus_tag=CCO40_04925 NZ_CP075116.1 Protein Homology CDS 1027085 1028116 . + 0 ID=cds-WP_000932249.1;Parent=gene-CCO40_RS04925;Dbxref=GenBank:WP_000932249.1;Name=WP_000932249.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461804.1;locus_tag=CCO40_RS04925;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=WP_000932249.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1028135 1030192 . + . ID=gene-CCO40_RS04930;Name=sipA;gbkey=Gene;gene=sipA;gene_biotype=protein_coding;locus_tag=CCO40_RS04930;old_locus_tag=CCO40_04930 NZ_CP075116.1 Protein Homology CDS 1028135 1030192 . + 0 ID=cds-WP_000258819.1;Parent=gene-CCO40_RS04930;Dbxref=GenBank:WP_000258819.1;Name=WP_000258819.1;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=CCO40_RS04930;product=SPI-1 type III secretion system effector SipA;protein_id=WP_000258819.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1030211 1030459 . + . ID=gene-CCO40_RS04935;Name=CCO40_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04935;old_locus_tag=CCO40_04935 NZ_CP075116.1 Protein Homology CDS 1030211 1030459 . + 0 ID=cds-WP_001055579.1;Parent=gene-CCO40_RS04935;Dbxref=GenBank:WP_001055579.1;Name=WP_001055579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461802.1;locus_tag=CCO40_RS04935;product=acyl carrier protein;protein_id=WP_001055579.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1030503 1030763 . + . ID=gene-CCO40_RS04940;Name=CCO40_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS04940;old_locus_tag=CCO40_04940 NZ_CP075116.1 Protein Homology CDS 1030503 1030763 . + 0 ID=cds-WP_000692254.1;Parent=gene-CCO40_RS04940;Dbxref=GenBank:WP_000692254.1;Name=WP_000692254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449260.1;locus_tag=CCO40_RS04940;product=hypothetical protein;protein_id=WP_000692254.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1030790 1031182 . + . ID=gene-CCO40_RS04945;Name=sicP;gbkey=Gene;gene=sicP;gene_biotype=protein_coding;locus_tag=CCO40_RS04945;old_locus_tag=CCO40_04945 NZ_CP075116.1 Protein Homology CDS 1030790 1031182 . + 0 ID=cds-WP_001147852.1;Parent=gene-CCO40_RS04945;Dbxref=GenBank:WP_001147852.1;Name=WP_001147852.1;gbkey=CDS;gene=sicP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=CCO40_RS04945;product=chaperone SicP;protein_id=WP_001147852.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1031169 1032800 . + . ID=gene-CCO40_RS04950;Name=sptP;gbkey=Gene;gene=sptP;gene_biotype=pseudogene;locus_tag=CCO40_RS04950;old_locus_tag=CCO40_04950;pseudo=true NZ_CP075116.1 Protein Homology CDS 1031169 1032800 . + 0 ID=cds-CCO40_RS04950;Parent=gene-CCO40_RS04950;Note=internal stop;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461799.1;locus_tag=CCO40_RS04950;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 1032854 1033336 . - . ID=gene-CCO40_RS04955;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=protein_coding;locus_tag=CCO40_RS04955;old_locus_tag=CCO40_04955 NZ_CP075116.1 Protein Homology CDS 1032854 1033336 . - 0 ID=cds-WP_000558928.1;Parent=gene-CCO40_RS04955;Dbxref=GenBank:WP_000558928.1;Name=WP_000558928.1;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461798.1;locus_tag=CCO40_RS04955;product=SPI-1 type III secretion system invasion protein IagB;protein_id=WP_000558928.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1033354 1035015 . - . ID=gene-CCO40_RS04960;Name=hilA;gbkey=Gene;gene=hilA;gene_biotype=protein_coding;locus_tag=CCO40_RS04960;old_locus_tag=CCO40_04960 NZ_CP075116.1 Protein Homology CDS 1033354 1035015 . - 0 ID=cds-WP_001120086.1;Parent=gene-CCO40_RS04960;Dbxref=GenBank:WP_001120086.1;Name=WP_001120086.1;gbkey=CDS;gene=hilA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461797.1;locus_tag=CCO40_RS04960;product=transcriptional regulator HilA;protein_id=WP_001120086.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1036106 1037035 . - . ID=gene-CCO40_RS04965;Name=hilD;gbkey=Gene;gene=hilD;gene_biotype=protein_coding;locus_tag=CCO40_RS04965;old_locus_tag=CCO40_04965 NZ_CP075116.1 Protein Homology CDS 1036106 1037035 . - 0 ID=cds-WP_000432700.1;Parent=gene-CCO40_RS04965;Dbxref=GenBank:WP_000432700.1;Name=WP_000432700.1;gbkey=CDS;gene=hilD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461796.1;locus_tag=CCO40_RS04965;product=transcriptional regulator HilD;protein_id=WP_000432700.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1037351 1038529 . + . ID=gene-CCO40_RS04970;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=CCO40_RS04970;old_locus_tag=CCO40_04970 NZ_CP075116.1 Protein Homology CDS 1037351 1038529 . + 0 ID=cds-WP_000450196.1;Parent=gene-CCO40_RS04970;Dbxref=GenBank:WP_000450196.1;Name=WP_000450196.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461795.1;locus_tag=CCO40_RS04970;product=type III secretion system inner membrane ring protein PrgH;protein_id=WP_000450196.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1038554 1038796 . + . ID=gene-CCO40_RS04975;Name=prgI;gbkey=Gene;gene=prgI;gene_biotype=protein_coding;locus_tag=CCO40_RS04975;old_locus_tag=CCO40_04975 NZ_CP075116.1 Protein Homology CDS 1038554 1038796 . + 0 ID=cds-WP_000235228.1;Parent=gene-CCO40_RS04975;Dbxref=GenBank:WP_000235228.1;Name=WP_000235228.1;gbkey=CDS;gene=prgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461794.1;locus_tag=CCO40_RS04975;product=type III secretion system needle filament protein PrgI;protein_id=WP_000235228.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1038815 1039120 . + . ID=gene-CCO40_RS04980;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=CCO40_RS04980;old_locus_tag=CCO40_04980 NZ_CP075116.1 Protein Homology CDS 1038815 1039120 . + 0 ID=cds-WP_000020431.1;Parent=gene-CCO40_RS04980;Dbxref=GenBank:WP_000020431.1;Name=WP_000020431.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461793.1;locus_tag=CCO40_RS04980;product=type III secretion system inner rod protein PrgJ;protein_id=WP_000020431.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1039117 1039875 . + . ID=gene-CCO40_RS04985;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=CCO40_RS04985;old_locus_tag=CCO40_04985 NZ_CP075116.1 Protein Homology CDS 1039117 1039875 . + 0 ID=cds-WP_000621238.1;Parent=gene-CCO40_RS04985;Dbxref=GenBank:WP_000621238.1;Name=WP_000621238.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461792.1;locus_tag=CCO40_RS04985;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=WP_000621238.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1039847 1040446 . + . ID=gene-CCO40_RS04990;Name=orgA;gbkey=Gene;gene=orgA;gene_biotype=protein_coding;locus_tag=CCO40_RS04990;old_locus_tag=CCO40_04990 NZ_CP075116.1 Protein Homology CDS 1039847 1040446 . + 0 ID=cds-WP_001574876.1;Parent=gene-CCO40_RS04990;Dbxref=GenBank:WP_001574876.1;Name=WP_001574876.1;gbkey=CDS;gene=orgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=CCO40_RS04990;product=oxygen-regulated invasion protein OrgA;protein_id=WP_001574876.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1040403 1041083 . + . ID=gene-CCO40_RS04995;Name=orgB;gbkey=Gene;gene=orgB;gene_biotype=protein_coding;locus_tag=CCO40_RS04995;old_locus_tag=CCO40_04995 NZ_CP075116.1 Protein Homology CDS 1040403 1041083 . + 0 ID=cds-WP_000916654.1;Parent=gene-CCO40_RS04995;Dbxref=GenBank:WP_000916654.1;Name=WP_000916654.1;gbkey=CDS;gene=orgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461790.1;locus_tag=CCO40_RS04995;product=type III secretion system linker protein OrgB;protein_id=WP_000916654.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1041080 1041532 . + . ID=gene-CCO40_RS05000;Name=CCO40_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05000;old_locus_tag=CCO40_05000 NZ_CP075116.1 Protein Homology CDS 1041080 1041532 . + 0 ID=cds-WP_000612179.1;Parent=gene-CCO40_RS05000;Dbxref=GenBank:WP_000612179.1;Name=WP_000612179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461789.1;locus_tag=CCO40_RS05000;product=type III secretion system effector protein OrgC;protein_id=WP_000612179.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1041877 1042764 . + . ID=gene-CCO40_RS05005;Name=hilC;gbkey=Gene;gene=hilC;gene_biotype=protein_coding;locus_tag=CCO40_RS05005;old_locus_tag=CCO40_05005 NZ_CP075116.1 Protein Homology CDS 1041877 1042764 . + 0 ID=cds-WP_000243998.1;Parent=gene-CCO40_RS05005;Dbxref=GenBank:WP_000243998.1;Name=WP_000243998.1;gbkey=CDS;gene=hilC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461788.1;locus_tag=CCO40_RS05005;product=invasion transcriptional regulator HilC;protein_id=WP_000243998.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1043149 1043904 . + . ID=gene-CCO40_RS05010;Name=sprB;gbkey=Gene;gene=sprB;gene_biotype=protein_coding;locus_tag=CCO40_RS05010;old_locus_tag=CCO40_05010 NZ_CP075116.1 Protein Homology CDS 1043149 1043904 . + 0 ID=cds-WP_001246659.1;Parent=gene-CCO40_RS05010;Dbxref=GenBank:WP_001246659.1;Name=WP_001246659.1;gbkey=CDS;gene=sprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461787.1;locus_tag=CCO40_RS05010;product=transcriptional regulator SprB;protein_id=WP_001246659.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1044065 1044973 . + . ID=gene-CCO40_RS05015;Name=avrA;gbkey=Gene;gene=avrA;gene_biotype=protein_coding;locus_tag=CCO40_RS05015;old_locus_tag=CCO40_05015 NZ_CP075116.1 Protein Homology CDS 1044065 1044973 . + 0 ID=cds-WP_001576330.1;Parent=gene-CCO40_RS05015;Dbxref=GenBank:WP_001576330.1;Name=WP_001576330.1;gbkey=CDS;gene=avrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576330.1;locus_tag=CCO40_RS05015;product=type III secretion system YopJ family effector AvrA;protein_id=WP_001576330.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1045072 1045920 . - . ID=gene-CCO40_RS05020;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=CCO40_RS05020;old_locus_tag=CCO40_05020 NZ_CP075116.1 Protein Homology CDS 1045072 1045920 . - 0 ID=cds-WP_000480205.1;Parent=gene-CCO40_RS05020;Dbxref=GenBank:WP_000480205.1;Name=WP_000480205.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461785.1;locus_tag=CCO40_RS05020;product=iron/manganese ABC transporter permease subunit SitD;protein_id=WP_000480205.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1045911 1046771 . - . ID=gene-CCO40_RS05025;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=CCO40_RS05025;old_locus_tag=CCO40_05025 NZ_CP075116.1 Protein Homology CDS 1045911 1046771 . - 0 ID=cds-WP_001104336.1;Parent=gene-CCO40_RS05025;Dbxref=GenBank:WP_001104336.1;Name=WP_001104336.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461784.1;locus_tag=CCO40_RS05025;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WP_001104336.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1046768 1047589 . - . ID=gene-CCO40_RS05030;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=CCO40_RS05030;old_locus_tag=CCO40_05030 NZ_CP075116.1 Protein Homology CDS 1046768 1047589 . - 0 ID=cds-WP_000083159.1;Parent=gene-CCO40_RS05030;Dbxref=GenBank:WP_000083159.1;Name=WP_000083159.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461783.1;locus_tag=CCO40_RS05030;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=WP_000083159.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1047586 1048503 . - . ID=gene-CCO40_RS05035;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=CCO40_RS05035;old_locus_tag=CCO40_05035 NZ_CP075116.1 Protein Homology CDS 1047586 1048503 . - 0 ID=cds-WP_000182931.1;Parent=gene-CCO40_RS05035;Dbxref=GenBank:WP_000182931.1;Name=WP_000182931.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461782.1;locus_tag=CCO40_RS05035;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=WP_000182931.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1048685 1049029 . + . ID=gene-CCO40_RS05040;Name=CCO40_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05040;old_locus_tag=CCO40_05040 NZ_CP075116.1 Protein Homology CDS 1048685 1049029 . + 0 ID=cds-WP_001117938.1;Parent=gene-CCO40_RS05040;Dbxref=GenBank:WP_001117938.1;Name=WP_001117938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461781.1;locus_tag=CCO40_RS05040;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_001117938.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1049091 1051169 . - . ID=gene-CCO40_RS05045;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=CCO40_RS05045;old_locus_tag=CCO40_05045 NZ_CP075116.1 Protein Homology CDS 1049091 1051169 . - 0 ID=cds-WP_000122696.1;Parent=gene-CCO40_RS05045;Dbxref=GenBank:WP_000122696.1;Name=WP_000122696.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=CCO40_RS05045;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_000122696.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1051388 1052398 . - . ID=gene-CCO40_RS05050;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=CCO40_RS05050;old_locus_tag=CCO40_05050 NZ_CP075116.1 Protein Homology CDS 1051388 1052398 . - 0 ID=cds-WP_001059950.1;Parent=gene-CCO40_RS05050;Dbxref=GenBank:WP_001059950.1;Name=WP_001059950.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=CCO40_RS05050;product=hydrogenase expression/formation protein HypE;protein_id=WP_001059950.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1052395 1053516 . - . ID=gene-CCO40_RS05055;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=CCO40_RS05055;old_locus_tag=CCO40_05055 NZ_CP075116.1 Protein Homology CDS 1052395 1053516 . - 0 ID=cds-WP_001212959.1;Parent=gene-CCO40_RS05055;Dbxref=GenBank:WP_001212959.1;Name=WP_001212959.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461778.2;locus_tag=CCO40_RS05055;product=hydrogenase formation protein HypD;protein_id=WP_001212959.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1053516 1053788 . - . ID=gene-CCO40_RS05060;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=CCO40_RS05060;old_locus_tag=CCO40_05060 NZ_CP075116.1 Protein Homology CDS 1053516 1053788 . - 0 ID=cds-WP_000334871.1;Parent=gene-CCO40_RS05060;Dbxref=GenBank:WP_000334871.1;Name=WP_000334871.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461777.1;locus_tag=CCO40_RS05060;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334871.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1053779 1054651 . - . ID=gene-CCO40_RS05065;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=CCO40_RS05065;old_locus_tag=CCO40_05065 NZ_CP075116.1 Protein Homology CDS 1053779 1054651 . - 0 ID=cds-WP_000337636.1;Parent=gene-CCO40_RS05065;Dbxref=GenBank:WP_000337636.1;Name=WP_000337636.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=CCO40_RS05065;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_000337636.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1054720 1055076 . - . ID=gene-CCO40_RS05070;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=CCO40_RS05070;old_locus_tag=CCO40_05070 NZ_CP075116.1 Protein Homology CDS 1054720 1055076 . - 0 ID=cds-WP_000544461.1;Parent=gene-CCO40_RS05070;Dbxref=GenBank:WP_000544461.1;Name=WP_000544461.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461775.1;locus_tag=CCO40_RS05070;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544461.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1055286 1055747 . + . ID=gene-CCO40_RS05075;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=CCO40_RS05075;old_locus_tag=CCO40_05075 NZ_CP075116.1 Protein Homology CDS 1055286 1055747 . + 0 ID=cds-WP_000158074.1;Parent=gene-CCO40_RS05075;Dbxref=GenBank:WP_000158074.1;Name=WP_000158074.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461774.1;locus_tag=CCO40_RS05075;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158074.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1055893 1056501 . + . ID=gene-CCO40_RS05080;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=CCO40_RS05080;old_locus_tag=CCO40_05080 NZ_CP075116.1 Protein Homology CDS 1055893 1056501 . + 0 ID=cds-WP_001079163.1;Parent=gene-CCO40_RS05080;Dbxref=GenBank:WP_001079163.1;Name=WP_001079163.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461773.1;locus_tag=CCO40_RS05080;product=formate hydrogenlyase subunit HycB;protein_id=WP_001079163.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1056501 1058327 . + . ID=gene-CCO40_RS05085;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=CCO40_RS05085;old_locus_tag=CCO40_05085 NZ_CP075116.1 Protein Homology CDS 1056501 1058327 . + 0 ID=cds-WP_094889103.1;Parent=gene-CCO40_RS05085;Dbxref=GenBank:WP_094889103.1;Name=WP_094889103.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=CCO40_RS05085;product=formate hydrogenlyase subunit 3;protein_id=WP_094889103.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1058330 1059253 . + . ID=gene-CCO40_RS05090;Name=CCO40_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05090;old_locus_tag=CCO40_05090 NZ_CP075116.1 Protein Homology CDS 1058330 1059253 . + 0 ID=cds-WP_000110563.1;Parent=gene-CCO40_RS05090;Dbxref=GenBank:WP_000110563.1;Name=WP_000110563.1;Ontology_term=GO:0022900,GO:0016491,GO:0005886,GO:0016020,GO:1990204;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461771.1;locus_tag=CCO40_RS05090;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_000110563.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1059271 1060980 . + . ID=gene-CCO40_RS05095;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=CCO40_RS05095;old_locus_tag=CCO40_05095 NZ_CP075116.1 Protein Homology CDS 1059271 1060980 . + 0 ID=cds-WP_001288155.1;Parent=gene-CCO40_RS05095;Dbxref=GenBank:WP_001288155.1;Name=WP_001288155.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=CCO40_RS05095;product=formate hydrogenlyase subunit HycE;protein_id=WP_001288155.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1060990 1061532 . + . ID=gene-CCO40_RS05100;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=CCO40_RS05100;old_locus_tag=CCO40_05100 NZ_CP075116.1 Protein Homology CDS 1060990 1061532 . + 0 ID=cds-WP_000493773.1;Parent=gene-CCO40_RS05100;Dbxref=GenBank:WP_000493773.1;Name=WP_000493773.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461769.1;locus_tag=CCO40_RS05100;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493773.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1061532 1062299 . + . ID=gene-CCO40_RS05105;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=CCO40_RS05105;old_locus_tag=CCO40_05105 NZ_CP075116.1 Protein Homology CDS 1061532 1062299 . + 0 ID=cds-WP_000067419.1;Parent=gene-CCO40_RS05105;Dbxref=GenBank:WP_000067419.1;Name=WP_000067419.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461768.1;locus_tag=CCO40_RS05105;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067419.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1062296 1062706 . + . ID=gene-CCO40_RS05110;Name=CCO40_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05110;old_locus_tag=CCO40_05110 NZ_CP075116.1 Protein Homology CDS 1062296 1062706 . + 0 ID=cds-WP_000003725.1;Parent=gene-CCO40_RS05110;Dbxref=GenBank:WP_000003725.1;Name=WP_000003725.1;Ontology_term=GO:0065003;gbkey=CDS;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461767.1;locus_tag=CCO40_RS05110;product=formate hydrogenlyase maturation HycH family protein;protein_id=WP_000003725.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1062699 1063169 . + . ID=gene-CCO40_RS05115;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=CCO40_RS05115;old_locus_tag=CCO40_05115 NZ_CP075116.1 Protein Homology CDS 1062699 1063169 . + 0 ID=cds-WP_000132991.1;Parent=gene-CCO40_RS05115;Dbxref=GenBank:WP_000132991.1;Name=WP_000132991.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461766.1;locus_tag=CCO40_RS05115;product=hydrogenase maturation peptidase HycI;protein_id=WP_000132991.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1063196 1064005 . + . ID=gene-CCO40_RS05120;Name=CCO40_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05120;old_locus_tag=CCO40_05120 NZ_CP075116.1 Protein Homology CDS 1063196 1064005 . + 0 ID=cds-WP_000902281.1;Parent=gene-CCO40_RS05120;Dbxref=GenBank:WP_000902281.1;Name=WP_000902281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461765.1;locus_tag=CCO40_RS05120;product=hypothetical protein;protein_id=WP_000902281.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1064206 1064751 . + . ID=gene-CCO40_RS05125;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=CCO40_RS05125;old_locus_tag=CCO40_05125 NZ_CP075116.1 Protein Homology CDS 1064206 1064751 . + 0 ID=cds-WP_001078791.1;Parent=gene-CCO40_RS05125;Dbxref=GenBank:WP_001078791.1;Name=WP_001078791.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461764.1;locus_tag=CCO40_RS05125;product=electron transport protein HydN;protein_id=WP_001078791.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1064897 1067137 . + . ID=gene-CCO40_RS05130;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=CCO40_RS05130;old_locus_tag=CCO40_05130 NZ_CP075116.1 Protein Homology CDS 1064897 1067137 . + 0 ID=cds-WP_000963433.1;Parent=gene-CCO40_RS05130;Dbxref=GenBank:WP_000963433.1;Name=WP_000963433.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=CCO40_RS05130;product=carbamoyltransferase HypF;protein_id=WP_000963433.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1067234 1068367 . - . ID=gene-CCO40_RS05135;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=CCO40_RS05135;old_locus_tag=CCO40_05135 NZ_CP075116.1 Protein Homology CDS 1067234 1068367 . - 0 ID=cds-WP_000086348.1;Parent=gene-CCO40_RS05135;Dbxref=GenBank:WP_000086348.1;Name=WP_000086348.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461762.1;locus_tag=CCO40_RS05135;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_000086348.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1068364 1069803 . - . ID=gene-CCO40_RS05140;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=CCO40_RS05140;old_locus_tag=CCO40_05140 NZ_CP075116.1 Protein Homology CDS 1068364 1069803 . - 0 ID=cds-WP_000026012.1;Parent=gene-CCO40_RS05140;Dbxref=GenBank:WP_000026012.1;Name=WP_000026012.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461761.1;locus_tag=CCO40_RS05140;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_000026012.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1069989 1071509 . + . ID=gene-CCO40_RS05145;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=CCO40_RS05145;old_locus_tag=CCO40_05145 NZ_CP075116.1 Protein Homology CDS 1069989 1071509 . + 0 ID=cds-WP_000010806.1;Parent=gene-CCO40_RS05145;Dbxref=GenBank:WP_000010806.1;Name=WP_000010806.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=CCO40_RS05145;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_000010806.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1071506 1072471 . - . ID=gene-CCO40_RS05150;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=CCO40_RS05150;old_locus_tag=CCO40_05150 NZ_CP075116.1 Protein Homology CDS 1071506 1072471 . - 0 ID=cds-WP_001278206.1;Parent=gene-CCO40_RS05150;Dbxref=GenBank:WP_001278206.1;Name=WP_001278206.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=CCO40_RS05150;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_001278206.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1072464 1073237 . - . ID=gene-CCO40_RS05155;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=CCO40_RS05155;old_locus_tag=CCO40_05155 NZ_CP075116.1 Protein Homology CDS 1072464 1073237 . - 0 ID=cds-WP_000804536.1;Parent=gene-CCO40_RS05155;Dbxref=GenBank:WP_000804536.1;Name=WP_000804536.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461758.1;locus_tag=CCO40_RS05155;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804536.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1073435 1073794 . - . ID=gene-CCO40_RS05160;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=CCO40_RS05160;old_locus_tag=CCO40_05160 NZ_CP075116.1 Protein Homology CDS 1073435 1073794 . - 0 ID=cds-WP_000255198.1;Parent=gene-CCO40_RS05160;Dbxref=GenBank:WP_000255198.1;Name=WP_000255198.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461757.1;locus_tag=CCO40_RS05160;product=transcriptional regulator GutM;protein_id=WP_000255198.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1073871 1074650 . - . ID=gene-CCO40_RS05165;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=CCO40_RS05165;old_locus_tag=CCO40_05165 NZ_CP075116.1 Protein Homology CDS 1073871 1074650 . - 0 ID=cds-WP_001077372.1;Parent=gene-CCO40_RS05165;Dbxref=GenBank:WP_001077372.1;Name=WP_001077372.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=CCO40_RS05165;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_001077372.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1074662 1075024 . - . ID=gene-CCO40_RS05170;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=CCO40_RS05170;old_locus_tag=CCO40_05170 NZ_CP075116.1 Protein Homology CDS 1074662 1075024 . - 0 ID=cds-WP_000111553.1;Parent=gene-CCO40_RS05170;Dbxref=GenBank:WP_000111553.1;Name=WP_000111553.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=CCO40_RS05170;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_000111553.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1075036 1076007 . - . ID=gene-CCO40_RS05175;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=CCO40_RS05175;old_locus_tag=CCO40_05175 NZ_CP075116.1 Protein Homology CDS 1075036 1076007 . - 0 ID=cds-WP_000199039.1;Parent=gene-CCO40_RS05175;Dbxref=GenBank:WP_000199039.1;Name=WP_000199039.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=CCO40_RS05175;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_000199039.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1076004 1076567 . - . ID=gene-CCO40_RS05180;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=CCO40_RS05180;old_locus_tag=CCO40_05180 NZ_CP075116.1 Protein Homology CDS 1076004 1076567 . - 0 ID=cds-WP_000573335.1;Parent=gene-CCO40_RS05180;Dbxref=GenBank:WP_000573335.1;Name=WP_000573335.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461753.1;locus_tag=CCO40_RS05180;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573335.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1076821 1077900 . + . ID=gene-CCO40_RS05185;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=CCO40_RS05185;old_locus_tag=CCO40_05185 NZ_CP075116.1 Protein Homology CDS 1076821 1077900 . + 0 ID=cds-WP_000476828.1;Parent=gene-CCO40_RS05185;Dbxref=GenBank:WP_000476828.1;Name=WP_000476828.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461752.1;locus_tag=CCO40_RS05185;product=lytic murein transglycosylase B;protein_id=WP_000476828.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1077937 1078182 . - . ID=gene-CCO40_RS22425;Name=CCO40_RS22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22425 NZ_CP075116.1 Protein Homology CDS 1077937 1078182 . - 0 ID=cds-WP_021000688.1;Parent=gene-CCO40_RS22425;Dbxref=GenBank:WP_021000688.1;Name=WP_021000688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053775.1;locus_tag=CCO40_RS22425;product=hypothetical protein;protein_id=WP_021000688.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1078378 1078875 . + . ID=gene-CCO40_RS05190;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=CCO40_RS05190;old_locus_tag=CCO40_05190 NZ_CP075116.1 Protein Homology CDS 1078378 1078875 . + 0 ID=cds-WP_000132239.1;Parent=gene-CCO40_RS05190;Dbxref=GenBank:WP_000132239.1;Name=WP_000132239.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461751.1;locus_tag=CCO40_RS05190;product=nicotinamide-nucleotide amidase;protein_id=WP_000132239.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1078960 1080021 . + . ID=gene-CCO40_RS05195;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=CCO40_RS05195;old_locus_tag=CCO40_05195 NZ_CP075116.1 Protein Homology CDS 1078960 1080021 . + 0 ID=cds-WP_000963150.1;Parent=gene-CCO40_RS05195;Dbxref=GenBank:WP_000963150.1;Name=WP_000963150.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461750.1;locus_tag=CCO40_RS05195;product=recombinase RecA;protein_id=WP_000963150.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1080138 1080638 . + . ID=gene-CCO40_RS05200;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=CCO40_RS05200;old_locus_tag=CCO40_05200 NZ_CP075116.1 Protein Homology CDS 1080138 1080638 . + 0 ID=cds-WP_001294858.1;Parent=gene-CCO40_RS05200;Dbxref=GenBank:WP_001294858.1;Name=WP_001294858.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461749.1;locus_tag=CCO40_RS05200;product=recombination regulator RecX;protein_id=WP_001294858.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1080874 1083504 . + . ID=gene-CCO40_RS05205;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=CCO40_RS05205;old_locus_tag=CCO40_05205 NZ_CP075116.1 Protein Homology CDS 1080874 1083504 . + 0 ID=cds-WP_000047224.1;Parent=gene-CCO40_RS05205;Dbxref=GenBank:WP_000047224.1;Name=WP_000047224.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=CCO40_RS05205;product=alanine--tRNA ligase;protein_id=WP_000047224.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1083739 1083924 . + . ID=gene-CCO40_RS05210;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=CCO40_RS05210;old_locus_tag=CCO40_05210 NZ_CP075116.1 Protein Homology CDS 1083739 1083924 . + 0 ID=cds-WP_000906486.1;Parent=gene-CCO40_RS05210;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=CCO40_RS05210;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1084228 1084320 . + . ID=gene-CCO40_RS05215;Name=CCO40_RS05215;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS05215;old_locus_tag=CCO40_05215 NZ_CP075116.1 tRNAscan-SE tRNA 1084228 1084320 . + . ID=rna-CCO40_RS05215;Parent=gene-CCO40_RS05215;anticodon=(pos:1084262..1084264);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS05215;product=tRNA-Ser NZ_CP075116.1 tRNAscan-SE exon 1084228 1084320 . + . ID=exon-CCO40_RS05215-1;Parent=rna-CCO40_RS05215;anticodon=(pos:1084262..1084264);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS05215;product=tRNA-Ser NZ_CP075116.1 RefSeq gene 1084324 1084400 . + . ID=gene-CCO40_RS05220;Name=CCO40_RS05220;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS05220;old_locus_tag=CCO40_05220 NZ_CP075116.1 tRNAscan-SE tRNA 1084324 1084400 . + . ID=rna-CCO40_RS05220;Parent=gene-CCO40_RS05220;anticodon=(pos:1084358..1084360);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS05220;product=tRNA-Arg NZ_CP075116.1 tRNAscan-SE exon 1084324 1084400 . + . ID=exon-CCO40_RS05220-1;Parent=rna-CCO40_RS05220;anticodon=(pos:1084358..1084360);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS05220;product=tRNA-Arg NZ_CP075116.1 RefSeq gene 1084462 1084538 . + . ID=gene-CCO40_RS05225;Name=CCO40_RS05225;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS05225;old_locus_tag=CCO40_05225 NZ_CP075116.1 tRNAscan-SE tRNA 1084462 1084538 . + . ID=rna-CCO40_RS05225;Parent=gene-CCO40_RS05225;anticodon=(pos:1084496..1084498);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS05225;product=tRNA-Arg NZ_CP075116.1 tRNAscan-SE exon 1084462 1084538 . + . ID=exon-CCO40_RS05225-1;Parent=rna-CCO40_RS05225;anticodon=(pos:1084496..1084498);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS05225;product=tRNA-Arg NZ_CP075116.1 RefSeq gene 1084601 1084677 . + . ID=gene-CCO40_RS05230;Name=CCO40_RS05230;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS05230;old_locus_tag=CCO40_05230 NZ_CP075116.1 tRNAscan-SE tRNA 1084601 1084677 . + . ID=rna-CCO40_RS05230;Parent=gene-CCO40_RS05230;anticodon=(pos:1084635..1084637);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS05230;product=tRNA-Arg NZ_CP075116.1 tRNAscan-SE exon 1084601 1084677 . + . ID=exon-CCO40_RS05230-1;Parent=rna-CCO40_RS05230;anticodon=(pos:1084635..1084637);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS05230;product=tRNA-Arg NZ_CP075116.1 RefSeq gene 1084871 1084947 . + . ID=gene-CCO40_RS05235;Name=CCO40_RS05235;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS05235;old_locus_tag=CCO40_05235 NZ_CP075116.1 tRNAscan-SE tRNA 1084871 1084947 . + . ID=rna-CCO40_RS05235;Parent=gene-CCO40_RS05235;anticodon=(pos:1084905..1084907);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS05235;product=tRNA-Arg NZ_CP075116.1 tRNAscan-SE exon 1084871 1084947 . + . ID=exon-CCO40_RS05235-1;Parent=rna-CCO40_RS05235;anticodon=(pos:1084905..1084907);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS05235;product=tRNA-Arg NZ_CP075116.1 RefSeq gene 1085318 1085884 . + . ID=gene-CCO40_RS05240;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=CCO40_RS05240;old_locus_tag=CCO40_05240 NZ_CP075116.1 Protein Homology CDS 1085318 1085884 . + 0 ID=cds-WP_000271296.1;Parent=gene-CCO40_RS05240;Dbxref=GenBank:WP_000271296.1;Name=WP_000271296.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461746.1;locus_tag=CCO40_RS05240;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_000271296.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1085881 1086306 . + . ID=gene-CCO40_RS05245;Name=CCO40_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05245;old_locus_tag=CCO40_05245 NZ_CP075116.1 Protein Homology CDS 1085881 1086306 . + 0 ID=cds-WP_001279499.1;Parent=gene-CCO40_RS05245;Dbxref=GenBank:WP_001279499.1;Name=WP_001279499.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461745.1;locus_tag=CCO40_RS05245;product=YqaA family protein;protein_id=WP_001279499.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1086383 1087939 . + . ID=gene-CCO40_RS05250;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=CCO40_RS05250;old_locus_tag=CCO40_05250 NZ_CP075116.1 Protein Homology CDS 1086383 1087939 . + 0 ID=cds-WP_000611821.1;Parent=gene-CCO40_RS05250;Dbxref=GenBank:WP_000611821.1;Name=WP_000611821.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=CCO40_RS05250;product=glutamate--cysteine ligase;protein_id=WP_000611821.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1088089 1088604 . + . ID=gene-CCO40_RS05255;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=CCO40_RS05255;old_locus_tag=CCO40_05255 NZ_CP075116.1 Protein Homology CDS 1088089 1088604 . + 0 ID=cds-WP_001130194.1;Parent=gene-CCO40_RS05255;Dbxref=GenBank:WP_001130194.1;Name=WP_001130194.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=CCO40_RS05255;product=S-ribosylhomocysteine lyase;protein_id=WP_001130194.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1088950 1090320 . + . ID=gene-CCO40_RS05260;Name=CCO40_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05260;old_locus_tag=CCO40_05260 NZ_CP075116.1 Protein Homology CDS 1088950 1090320 . + 0 ID=cds-WP_000645129.1;Parent=gene-CCO40_RS05260;Dbxref=GenBank:WP_000645129.1;Name=WP_000645129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=CCO40_RS05260;product=carbohydrate porin;protein_id=WP_000645129.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1090369 1091907 . - . ID=gene-CCO40_RS05265;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=CCO40_RS05265;old_locus_tag=CCO40_05265 NZ_CP075116.1 Protein Homology CDS 1090369 1091907 . - 0 ID=cds-WP_001187297.1;Parent=gene-CCO40_RS05265;Dbxref=GenBank:WP_001187297.1;Name=WP_001187297.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461741.1;locus_tag=CCO40_RS05265;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_001187297.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1091924 1093096 . - . ID=gene-CCO40_RS05270;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=CCO40_RS05270;old_locus_tag=CCO40_05270 NZ_CP075116.1 Protein Homology CDS 1091924 1093096 . - 0 ID=cds-WP_001275606.1;Parent=gene-CCO40_RS05270;Dbxref=GenBank:WP_001275606.1;Name=WP_001275606.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=CCO40_RS05270;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_001275606.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1093223 1093753 . - . ID=gene-CCO40_RS05275;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=CCO40_RS05275;old_locus_tag=CCO40_05275 NZ_CP075116.1 Protein Homology CDS 1093223 1093753 . - 0 ID=cds-WP_000378431.1;Parent=gene-CCO40_RS05275;Dbxref=GenBank:WP_000378431.1;Name=WP_000378431.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461739.1;locus_tag=CCO40_RS05275;product=transcriptional repressor MprA;protein_id=WP_000378431.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1094250 1095434 . - . ID=gene-CCO40_RS05280;Name=CCO40_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05280;old_locus_tag=CCO40_05280 NZ_CP075116.1 Protein Homology CDS 1094250 1095434 . - 0 ID=cds-WP_000165769.1;Parent=gene-CCO40_RS05280;Dbxref=GenBank:WP_000165769.1;Name=WP_000165769.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461738.1;locus_tag=CCO40_RS05280;product=MFS transporter;protein_id=WP_000165769.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1095599 1096594 . - . ID=gene-CCO40_RS05285;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=CCO40_RS05285;old_locus_tag=CCO40_05285 NZ_CP075116.1 Protein Homology CDS 1095599 1096594 . - 0 ID=cds-WP_001216619.1;Parent=gene-CCO40_RS05285;Dbxref=GenBank:WP_001216619.1;Name=WP_001216619.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461737.1;locus_tag=CCO40_RS05285;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216619.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1096664 1097728 . - . ID=gene-CCO40_RS05290;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=CCO40_RS05290;old_locus_tag=CCO40_05290 NZ_CP075116.1 Protein Homology CDS 1096664 1097728 . - 0 ID=cds-WP_000775021.1;Parent=gene-CCO40_RS05290;Dbxref=GenBank:WP_000775021.1;Name=WP_000775021.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461736.1;locus_tag=CCO40_RS05290;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_000775021.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1097721 1098923 . - . ID=gene-CCO40_RS05295;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=CCO40_RS05295;old_locus_tag=CCO40_05295 NZ_CP075116.1 Protein Homology CDS 1097721 1098923 . - 0 ID=cds-WP_000985529.1;Parent=gene-CCO40_RS05295;Dbxref=GenBank:WP_000985529.1;Name=WP_000985529.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=CCO40_RS05295;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_000985529.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1099278 1100237 . - . ID=gene-CCO40_RS05300;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=CCO40_RS05300;old_locus_tag=CCO40_05300 NZ_CP075116.1 Protein Homology CDS 1099278 1100237 . - 0 ID=cds-WP_000777905.1;Parent=gene-CCO40_RS05300;Dbxref=GenBank:WP_000777905.1;Name=WP_000777905.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461734.1;locus_tag=CCO40_RS05300;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000777905.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1100248 1102365 . - . ID=gene-CCO40_RS05305;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=CCO40_RS05305;old_locus_tag=CCO40_05305 NZ_CP075116.1 Protein Homology CDS 1100248 1102365 . - 0 ID=cds-WP_001532519.1;Parent=gene-CCO40_RS05305;Dbxref=GenBank:WP_001532519.1;Name=WP_001532519.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526351.1;locus_tag=CCO40_RS05305;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001532519.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1102365 1102775 . - . ID=gene-CCO40_RS05310;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=CCO40_RS05310;old_locus_tag=CCO40_05310 NZ_CP075116.1 Protein Homology CDS 1102365 1102775 . - 0 ID=cds-WP_001275402.1;Parent=gene-CCO40_RS05310;Dbxref=GenBank:WP_001275402.1;Name=WP_001275402.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461732.1;locus_tag=CCO40_RS05310;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_001275402.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1102772 1103017 . - . ID=gene-CCO40_RS05315;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=CCO40_RS05315;old_locus_tag=CCO40_05315 NZ_CP075116.1 Protein Homology CDS 1102772 1103017 . - 0 ID=cds-WP_000028870.1;Parent=gene-CCO40_RS05315;Dbxref=GenBank:WP_000028870.1;Name=WP_000028870.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461731.1;locus_tag=CCO40_RS05315;product=glutaredoxin-like protein NrdH;protein_id=WP_000028870.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1103289 1103720 . - . ID=gene-CCO40_RS05320;Name=CCO40_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05320;old_locus_tag=CCO40_05320 NZ_CP075116.1 Protein Homology CDS 1103289 1103720 . - 0 ID=cds-WP_000209807.1;Parent=gene-CCO40_RS05320;Dbxref=GenBank:WP_000209807.1;Name=WP_000209807.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461730.1;locus_tag=CCO40_RS05320;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000209807.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1103809 1105143 . + . ID=gene-CCO40_RS05325;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=CCO40_RS05325;old_locus_tag=CCO40_05325 NZ_CP075116.1 Protein Homology CDS 1103809 1105143 . + 0 ID=cds-WP_001138465.1;Parent=gene-CCO40_RS05325;Dbxref=GenBank:WP_001138465.1;Name=WP_001138465.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=CCO40_RS05325;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_001138465.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1105227 1105553 . - . ID=gene-CCO40_RS05330;Name=CCO40_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05330;old_locus_tag=CCO40_05330 NZ_CP075116.1 Protein Homology CDS 1105227 1105553 . - 0 ID=cds-WP_001519557.1;Parent=gene-CCO40_RS05330;Dbxref=GenBank:WP_001519557.1;Name=WP_001519557.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528627.1;locus_tag=CCO40_RS05330;product=ElaB/YgaM/YqjD family protein;protein_id=WP_001519557.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1105715 1106065 . + . ID=gene-CCO40_RS05335;Name=CCO40_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05335;old_locus_tag=CCO40_05335 NZ_CP075116.1 Protein Homology CDS 1105715 1106065 . + 0 ID=cds-WP_000281304.1;Parent=gene-CCO40_RS05335;Dbxref=GenBank:WP_000281304.1;Name=WP_000281304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461727.1;locus_tag=CCO40_RS05335;product=DUF2002 family protein;protein_id=WP_000281304.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1106100 1106549 . - . ID=gene-CCO40_RS05340;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=CCO40_RS05340;old_locus_tag=CCO40_05340 NZ_CP075116.1 Protein Homology CDS 1106100 1106549 . - 0 ID=cds-WP_000492669.1;Parent=gene-CCO40_RS05340;Dbxref=GenBank:WP_000492669.1;Name=WP_000492669.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=CCO40_RS05340;product=L-alanine exporter AlaE;protein_id=WP_000492669.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1107248 1107649 . + . ID=gene-CCO40_RS05345;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=CCO40_RS05345;old_locus_tag=CCO40_05345 NZ_CP075116.1 Protein Homology CDS 1107248 1107649 . + 0 ID=cds-WP_001051100.1;Parent=gene-CCO40_RS05345;Dbxref=GenBank:WP_001051100.1;Name=WP_001051100.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461725.1;locus_tag=CCO40_RS05345;product=DNA-binding protein StpA;protein_id=WP_001051100.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1107739 1107918 . - . ID=gene-CCO40_RS05350;Name=CCO40_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05350;old_locus_tag=CCO40_05350 NZ_CP075116.1 Protein Homology CDS 1107739 1107918 . - 0 ID=cds-WP_000494944.1;Parent=gene-CCO40_RS05350;Dbxref=GenBank:WP_000494944.1;Name=WP_000494944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494935.1;locus_tag=CCO40_RS05350;product=GDFGVC terminal motif YodC-like protein;protein_id=WP_000494944.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1107997 1108524 . - . ID=gene-CCO40_RS05355;Name=CCO40_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05355;old_locus_tag=CCO40_05355 NZ_CP075116.1 Protein Homology CDS 1107997 1108524 . - 0 ID=cds-WP_000022009.1;Parent=gene-CCO40_RS05355;Dbxref=GenBank:WP_000022009.1;Name=WP_000022009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461724.1;locus_tag=CCO40_RS05355;product=rhodanese family protein;protein_id=WP_000022009.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1108534 1108833 . - . ID=gene-CCO40_RS05360;Name=CCO40_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05360;old_locus_tag=CCO40_05360 NZ_CP075116.1 Protein Homology CDS 1108534 1108833 . - 0 ID=cds-WP_000137433.1;Parent=gene-CCO40_RS05360;Dbxref=GenBank:WP_000137433.1;Name=WP_000137433.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461723.1;locus_tag=CCO40_RS05360;product=ArsR/SmtB family transcription factor;protein_id=WP_000137433.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1109016 1109174 . + . ID=gene-CCO40_RS05365;Name=CCO40_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05365;old_locus_tag=CCO40_05365 NZ_CP075116.1 Protein Homology CDS 1109016 1109174 . + 0 ID=cds-WP_000508175.1;Parent=gene-CCO40_RS05365;Dbxref=GenBank:WP_000508175.1;Name=WP_000508175.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461722.1;locus_tag=CCO40_RS05365;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508175.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1109274 1109723 . + . ID=gene-CCO40_RS05370;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=CCO40_RS05370;old_locus_tag=CCO40_05370 NZ_CP075116.1 Protein Homology CDS 1109274 1109723 . + 0 ID=cds-WP_000522406.1;Parent=gene-CCO40_RS05370;Dbxref=GenBank:WP_000522406.1;Name=WP_000522406.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=CCO40_RS05370;product=peptidoglycan-binding protein LysM;protein_id=WP_000522406.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1109745 1110422 . - . ID=gene-CCO40_RS05375;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=CCO40_RS05375;old_locus_tag=CCO40_05375 NZ_CP075116.1 Protein Homology CDS 1109745 1110422 . - 0 ID=cds-WP_000126152.1;Parent=gene-CCO40_RS05375;Dbxref=GenBank:WP_000126152.1;Name=WP_000126152.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461720.1;locus_tag=CCO40_RS05375;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000126152.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1110464 1111864 . - . ID=gene-CCO40_RS05380;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=CCO40_RS05380;old_locus_tag=CCO40_05380 NZ_CP075116.1 Protein Homology CDS 1110464 1111864 . - 0 ID=cds-WP_000531282.1;Parent=gene-CCO40_RS05380;Dbxref=GenBank:WP_000531282.1;Name=WP_000531282.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461719.1;locus_tag=CCO40_RS05380;product=GABA permease;protein_id=WP_000531282.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1111995 1113278 . - . ID=gene-CCO40_RS05385;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=CCO40_RS05385;old_locus_tag=CCO40_05385 NZ_CP075116.1 Protein Homology CDS 1111995 1113278 . - 0 ID=cds-WP_001095555.1;Parent=gene-CCO40_RS05385;Dbxref=GenBank:WP_001095555.1;Name=WP_001095555.1;Ontology_term=GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=CCO40_RS05385;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_001095555.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1113293 1114741 . - . ID=gene-CCO40_RS05390;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=CCO40_RS05390;old_locus_tag=CCO40_05390 NZ_CP075116.1 Protein Homology CDS 1113293 1114741 . - 0 ID=cds-WP_001176530.1;Parent=gene-CCO40_RS05390;Dbxref=GenBank:WP_001176530.1;Name=WP_001176530.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=GABA catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461717.1;locus_tag=CCO40_RS05390;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_001176530.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1114763 1116031 . - . ID=gene-CCO40_RS05395;Name=lhgD;gbkey=Gene;gene=lhgD;gene_biotype=protein_coding;gene_synonym=lghO,ygaF;locus_tag=CCO40_RS05395;old_locus_tag=CCO40_05395 NZ_CP075116.1 Protein Homology CDS 1114763 1116031 . - 0 ID=cds-WP_094889104.1;Parent=gene-CCO40_RS05395;Dbxref=GenBank:WP_094889104.1;Name=WP_094889104.1;Ontology_term=GO:0019477,GO:0050660,GO:0140696;gbkey=CDS;gene=lhgD;go_function=flavin adenine dinucleotide binding|0050660||IEA,(S)-2-hydroxyglutarate dehydrogenase (quinone) activity|0140696||IEA;go_process=L-lysine catabolic process|0019477||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461716.1;locus_tag=CCO40_RS05395;product=L-2-hydroxyglutarate dehydrogenase;protein_id=WP_094889104.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1116057 1117034 . - . ID=gene-CCO40_RS05400;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=CCO40_RS05400;old_locus_tag=CCO40_05400 NZ_CP075116.1 Protein Homology CDS 1116057 1117034 . - 0 ID=cds-WP_000993100.1;Parent=gene-CCO40_RS05400;Dbxref=GenBank:WP_000993100.1;Name=WP_000993100.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=CCO40_RS05400;product=glutarate dioxygenase GlaH;protein_id=WP_000993100.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1117337 1118851 . - . ID=gene-CCO40_RS05405;Name=CCO40_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05405;old_locus_tag=CCO40_05405 NZ_CP075116.1 Protein Homology CDS 1117337 1118851 . - 0 ID=cds-WP_000382034.1;Parent=gene-CCO40_RS05405;Dbxref=GenBank:WP_000382034.1;Name=WP_000382034.1;Ontology_term=GO:0006810,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=CCO40_RS05405;product=tripartite tricarboxylate transporter permease;protein_id=WP_000382034.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1118862 1119296 . - . ID=gene-CCO40_RS05410;Name=CCO40_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05410;old_locus_tag=CCO40_05410 NZ_CP075116.1 Protein Homology CDS 1118862 1119296 . - 0 ID=cds-WP_001574835.1;Parent=gene-CCO40_RS05410;Dbxref=GenBank:WP_001574835.1;Name=WP_001574835.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=CCO40_RS05410;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_001574835.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1119308 1120285 . - . ID=gene-CCO40_RS05415;Name=CCO40_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05415;old_locus_tag=CCO40_05415 NZ_CP075116.1 Protein Homology CDS 1119308 1120285 . - 0 ID=cds-WP_000744414.1;Parent=gene-CCO40_RS05415;Dbxref=GenBank:WP_000744414.1;Name=WP_000744414.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=CCO40_RS05415;product=Bug family tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_000744414.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1120440 1121114 . + . ID=gene-CCO40_RS05420;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=CCO40_RS05420;old_locus_tag=CCO40_05420 NZ_CP075116.1 Protein Homology CDS 1120440 1121114 . + 0 ID=cds-WP_001237934.1;Parent=gene-CCO40_RS05420;Dbxref=GenBank:WP_001237934.1;Name=WP_001237934.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=CCO40_RS05420;product=transcriptional regulator TctD;protein_id=WP_001237934.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1121101 1122516 . + . ID=gene-CCO40_RS05425;Name=CCO40_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05425;old_locus_tag=CCO40_05425 NZ_CP075116.1 Protein Homology CDS 1121101 1122516 . + 0 ID=cds-WP_000872338.1;Parent=gene-CCO40_RS05425;Dbxref=GenBank:WP_000872338.1;Name=WP_000872338.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461710.1;locus_tag=CCO40_RS05425;product=sensor histidine kinase;protein_id=WP_000872338.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1122649 1123662 . + . ID=gene-CCO40_RS05430;Name=CCO40_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05430;old_locus_tag=CCO40_05430 NZ_CP075116.1 Protein Homology CDS 1122649 1123662 . + 0 ID=cds-WP_094889105.1;Parent=gene-CCO40_RS05430;Dbxref=GenBank:WP_094889105.1;Name=WP_094889105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=CCO40_RS05430;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_094889105.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1124384 1125280 . - . ID=gene-CCO40_RS05435;Name=CCO40_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05435;old_locus_tag=CCO40_05435 NZ_CP075116.1 Protein Homology CDS 1124384 1125280 . - 0 ID=cds-WP_094889106.1;Parent=gene-CCO40_RS05435;Dbxref=GenBank:WP_094889106.1;Name=WP_094889106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461708.1;locus_tag=CCO40_RS05435;product=antimicrobial resistance protein Mig-14;protein_id=WP_094889106.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1125574 1126503 . - . ID=gene-CCO40_RS05440;Name=CCO40_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05440;old_locus_tag=CCO40_05440 NZ_CP075116.1 Protein Homology CDS 1125574 1126503 . - 0 ID=cds-WP_000178734.1;Parent=gene-CCO40_RS05440;Dbxref=GenBank:WP_000178734.1;Name=WP_000178734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461707.1;locus_tag=CCO40_RS05440;product=VirK family antimicrobial peptide resistance protein;protein_id=WP_000178734.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1127022 1128074 . + . ID=gene-CCO40_RS05445;Name=pipB2;gbkey=Gene;gene=pipB2;gene_biotype=protein_coding;locus_tag=CCO40_RS05445;old_locus_tag=CCO40_05445 NZ_CP075116.1 Protein Homology CDS 1127022 1128074 . + 0 ID=cds-WP_094889112.1;Parent=gene-CCO40_RS05445;Dbxref=GenBank:WP_094889112.1;Name=WP_094889112.1;gbkey=CDS;gene=pipB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461706.1;locus_tag=CCO40_RS05445;product=SPI-2 type III secretion system effector PipB2;protein_id=WP_094889112.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1128249 1128581 . + . ID=gene-CCO40_RS05450;Name=CCO40_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05450;old_locus_tag=CCO40_05450 NZ_CP075116.1 Protein Homology CDS 1128249 1128581 . + 0 ID=cds-WP_077463764.1;Parent=gene-CCO40_RS05450;Dbxref=GenBank:WP_077463764.1;Name=WP_077463764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449164.1;locus_tag=CCO40_RS05450;product=hypothetical protein;protein_id=WP_077463764.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1129113 1131287 . + . ID=gene-CCO40_RS05455;Name=CCO40_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05455;old_locus_tag=CCO40_05455 NZ_CP075116.1 Protein Homology CDS 1129113 1131287 . + 0 ID=cds-WP_272897645.1;Parent=gene-CCO40_RS05455;Dbxref=GenBank:WP_272897645.1;Name=WP_272897645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542215.1;locus_tag=CCO40_RS05455;product=TonB-dependent siderophore receptor;protein_id=WP_272897645.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1131329 1132258 . - . ID=gene-CCO40_RS05460;Name=CCO40_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05460;old_locus_tag=CCO40_05460 NZ_CP075116.1 Protein Homology CDS 1131329 1132258 . - 0 ID=cds-WP_094889108.1;Parent=gene-CCO40_RS05460;Dbxref=GenBank:WP_094889108.1;Name=WP_094889108.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461703.1;locus_tag=CCO40_RS05460;product=alpha/beta hydrolase;protein_id=WP_094889108.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1132290 1133534 . - . ID=gene-CCO40_RS05465;Name=CCO40_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05465;old_locus_tag=CCO40_05465 NZ_CP075116.1 Protein Homology CDS 1132290 1133534 . - 0 ID=cds-WP_094889109.1;Parent=gene-CCO40_RS05465;Dbxref=GenBank:WP_094889109.1;Name=WP_094889109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461702.1;locus_tag=CCO40_RS05465;product=alpha/beta hydrolase-fold protein;protein_id=WP_094889109.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1133644 1137297 . - . ID=gene-CCO40_RS05470;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=protein_coding;locus_tag=CCO40_RS05470;old_locus_tag=CCO40_05470 NZ_CP075116.1 Protein Homology CDS 1133644 1137297 . - 0 ID=cds-WP_094889110.1;Parent=gene-CCO40_RS05470;Dbxref=GenBank:WP_094889110.1;Name=WP_094889110.1;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461701.1;locus_tag=CCO40_RS05470;product=salmochelin/enterobactin export ABC transporter IroC;protein_id=WP_094889110.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1137378 1138493 . - . ID=gene-CCO40_RS05475;Name=iroB;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=CCO40_RS05475;old_locus_tag=CCO40_05475 NZ_CP075116.1 Protein Homology CDS 1137378 1138493 . - 0 ID=cds-WP_001221110.1;Parent=gene-CCO40_RS05475;Dbxref=GenBank:WP_001221110.1;Name=WP_001221110.1;gbkey=CDS;gene=iroB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461700.1;locus_tag=CCO40_RS05475;product=salmochelin biosynthesis C-glycosyltransferase IroB;protein_id=WP_001221110.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1139450 1140013 . - . ID=gene-CCO40_RS05480;Name=hin;gbkey=Gene;gene=hin;gene_biotype=protein_coding;locus_tag=CCO40_RS05480;old_locus_tag=CCO40_05480 NZ_CP075116.1 Protein Homology CDS 1139450 1140013 . - 0 ID=cds-WP_000190919.1;Parent=gene-CCO40_RS05480;Dbxref=GenBank:WP_000190919.1;Name=WP_000190919.1;gbkey=CDS;gene=hin;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000190919.1;locus_tag=CCO40_RS05480;product=flagellar phase variation DNA invertase Hin;protein_id=WP_000190919.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1140121 1141641 . + . ID=gene-CCO40_RS05485;Name=CCO40_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05485;old_locus_tag=CCO40_05485 NZ_CP075116.1 Protein Homology CDS 1140121 1141641 . + 0 ID=cds-WP_000079794.1;Parent=gene-CCO40_RS05485;Dbxref=GenBank:WP_000079794.1;Name=WP_000079794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461698.1;locus_tag=CCO40_RS05485;product=FliC/FljB family flagellin;protein_id=WP_000079794.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1141709 1142248 . + . ID=gene-CCO40_RS05490;Name=fljA;gbkey=Gene;gene=fljA;gene_biotype=protein_coding;locus_tag=CCO40_RS05490;old_locus_tag=CCO40_05490 NZ_CP075116.1 Protein Homology CDS 1141709 1142248 . + 0 ID=cds-WP_000388997.1;Parent=gene-CCO40_RS05490;Dbxref=GenBank:WP_000388997.1;Name=WP_000388997.1;gbkey=CDS;gene=fljA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461697.1;locus_tag=CCO40_RS05490;product=phase 1 flagellin gene repressor FljA;protein_id=WP_000388997.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1143028 1144190 . - . ID=gene-CCO40_RS05495;Name=CCO40_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05495;old_locus_tag=CCO40_05495 NZ_CP075116.1 Protein Homology CDS 1143926 1144190 . - 0 ID=cds-WP_085983317.1;Parent=gene-CCO40_RS05495;Dbxref=GenBank:WP_085983317.1;Name=WP_085983317.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=CCO40_RS05495;product=IS3 family transposase;protein_id=WP_085983317.1;transl_table=11 NZ_CP075116.1 Protein Homology CDS 1143028 1143926 . - 2 ID=cds-WP_085983317.1;Parent=gene-CCO40_RS05495;Dbxref=GenBank:WP_085983317.1;Name=WP_085983317.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=CCO40_RS05495;product=IS3 family transposase;protein_id=WP_085983317.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1144469 1146451 . + . ID=gene-CCO40_RS05500;Name=CCO40_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05500;old_locus_tag=CCO40_05500 NZ_CP075116.1 Protein Homology CDS 1144469 1146451 . + 0 ID=cds-WP_000073810.1;Parent=gene-CCO40_RS05500;Dbxref=GenBank:WP_000073810.1;Name=WP_000073810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461694.1;locus_tag=CCO40_RS05500;product=STM2767 family DEAD/DEAH box helicase;protein_id=WP_000073810.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1146448 1147086 . + . ID=gene-CCO40_RS05505;Name=CCO40_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05505;old_locus_tag=CCO40_05505 NZ_CP075116.1 Protein Homology CDS 1146448 1147086 . + 0 ID=cds-WP_000061088.1;Parent=gene-CCO40_RS05505;Dbxref=GenBank:WP_000061088.1;Name=WP_000061088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461693.1;locus_tag=CCO40_RS05505;product=STM2766 family helicase-associated protein;protein_id=WP_000061088.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1147539 1148650 . + . ID=gene-CCO40_RS05510;Name=CCO40_RS05510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS05510;old_locus_tag=CCO40_05510;pseudo=true NZ_CP075116.1 Protein Homology CDS 1147539 1148650 . + 0 ID=cds-CCO40_RS05510;Parent=gene-CCO40_RS05510;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611500.1;locus_tag=CCO40_RS05510;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 1148800 1149396 . - . ID=gene-CCO40_RS05515;Name=CCO40_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05515;old_locus_tag=CCO40_05515 NZ_CP075116.1 Protein Homology CDS 1148800 1149396 . - 0 ID=cds-WP_001682341.1;Parent=gene-CCO40_RS05515;Dbxref=GenBank:WP_001682341.1;Name=WP_001682341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449149.1;locus_tag=CCO40_RS05515;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_001682341.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1149974 1151257 . + . ID=gene-CCO40_RS05520;Name=CCO40_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05520;old_locus_tag=CCO40_05520 NZ_CP075116.1 Protein Homology CDS 1149974 1151257 . + 0 ID=cds-WP_010989066.1;Parent=gene-CCO40_RS05520;Dbxref=GenBank:WP_010989066.1;Name=WP_010989066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461689.1;locus_tag=CCO40_RS05520;product=membrane protein;protein_id=WP_010989066.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1151517 1153391 . - . ID=gene-CCO40_RS05525;Name=CCO40_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05525;old_locus_tag=CCO40_05525 NZ_CP075116.1 Protein Homology CDS 1151517 1153391 . - 0 ID=cds-WP_001532204.1;Parent=gene-CCO40_RS05525;Dbxref=GenBank:WP_001532204.1;Name=WP_001532204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461688.1;locus_tag=CCO40_RS05525;product=hypothetical protein;protein_id=WP_001532204.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1153557 1154432 . - . ID=gene-CCO40_RS05530;Name=CCO40_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05530;old_locus_tag=CCO40_05530 NZ_CP075116.1 Protein Homology CDS 1153557 1154432 . - 0 ID=cds-WP_000088556.1;Parent=gene-CCO40_RS05530;Dbxref=GenBank:WP_000088556.1;Name=WP_000088556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461687.1;locus_tag=CCO40_RS05530;product=integrase domain-containing protein;protein_id=WP_000088556.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1155549 1157228 . - . ID=gene-CCO40_RS05535;Name=CCO40_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05535;old_locus_tag=CCO40_05535 NZ_CP075116.1 Protein Homology CDS 1155549 1157228 . - 0 ID=cds-WP_000021514.1;Parent=gene-CCO40_RS05535;Dbxref=GenBank:WP_000021514.1;Name=WP_000021514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461686.1;locus_tag=CCO40_RS05535;product=SgrR family transcriptional regulator;protein_id=WP_000021514.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1157451 1158992 . + . ID=gene-CCO40_RS05540;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=CCO40_RS05540;old_locus_tag=CCO40_05540 NZ_CP075116.1 Protein Homology CDS 1157451 1158992 . + 0 ID=cds-WP_000819716.1;Parent=gene-CCO40_RS05540;Dbxref=GenBank:WP_000819716.1;Name=WP_000819716.1;Ontology_term=GO:1904659,GO:0055056,GO:0016020;gbkey=CDS;gene=ptsG;go_component=membrane|0016020||IEA;go_function=D-glucose transmembrane transporter activity|0055056||IEA;go_process=D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461685.1;locus_tag=CCO40_RS05540;product=glucose-specific PTS transporter subunit IIBC;protein_id=WP_000819716.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1159122 1159964 . + . ID=gene-CCO40_RS05545;Name=CCO40_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05545;old_locus_tag=CCO40_05545 NZ_CP075116.1 Protein Homology CDS 1159122 1159964 . + 0 ID=cds-WP_000811366.1;Parent=gene-CCO40_RS05545;Dbxref=GenBank:WP_000811366.1;Name=WP_000811366.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461684.1;locus_tag=CCO40_RS05545;product=glucose-6-phosphate isomerase family protein;protein_id=WP_000811366.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1159964 1160527 . + . ID=gene-CCO40_RS05550;Name=hxlB;gbkey=Gene;gene=hxlB;gene_biotype=protein_coding;locus_tag=CCO40_RS05550;old_locus_tag=CCO40_05550 NZ_CP075116.1 Protein Homology CDS 1159964 1160527 . + 0 ID=cds-WP_001682344.1;Parent=gene-CCO40_RS05550;Dbxref=GenBank:WP_001682344.1;Name=WP_001682344.1;Ontology_term=GO:1901135,GO:0016853,GO:0043800;gbkey=CDS;gene=hxlB;go_function=isomerase activity|0016853||IEA,6-phospho-3-hexuloisomerase activity|0043800||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461683.1;locus_tag=CCO40_RS05550;product=6-phospho-3-hexuloisomerase;protein_id=WP_001682344.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1160551 1161186 . + . ID=gene-CCO40_RS05555;Name=hxlA;gbkey=Gene;gene=hxlA;gene_biotype=protein_coding;locus_tag=CCO40_RS05555;old_locus_tag=CCO40_05555 NZ_CP075116.1 Protein Homology CDS 1160551 1161186 . + 0 ID=cds-WP_000776032.1;Parent=gene-CCO40_RS05555;Dbxref=GenBank:WP_000776032.1;Name=WP_000776032.1;Ontology_term=GO:0005975,GO:0019649,GO:0043801;gbkey=CDS;gene=hxlA;go_function=hexulose-6-phosphate synthase activity|0043801||IEA;go_process=carbohydrate metabolic process|0005975||IEA,formaldehyde assimilation|0019649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461682.1;locus_tag=CCO40_RS05555;product=3-hexulose-6-phosphate synthase;protein_id=WP_000776032.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1161260 1162462 . - . ID=gene-CCO40_RS05560;Name=CCO40_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05560;old_locus_tag=CCO40_05560 NZ_CP075116.1 Protein Homology CDS 1161260 1162462 . - 0 ID=cds-WP_000889012.1;Parent=gene-CCO40_RS05560;Dbxref=GenBank:WP_000889012.1;Name=WP_000889012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461681.1;locus_tag=CCO40_RS05560;product=protein NO VEIN domain-containing protein;protein_id=WP_000889012.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1162757 1163770 . - . ID=gene-CCO40_RS05565;Name=CCO40_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05565;old_locus_tag=CCO40_05565 NZ_CP075116.1 Protein Homology CDS 1162757 1163770 . - 0 ID=cds-WP_001033832.1;Parent=gene-CCO40_RS05565;Dbxref=GenBank:WP_001033832.1;Name=WP_001033832.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461680.1;locus_tag=CCO40_RS05565;product=Gfo/Idh/MocA family protein;protein_id=WP_001033832.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1163781 1164761 . - . ID=gene-CCO40_RS05570;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=CCO40_RS05570;old_locus_tag=CCO40_05570 NZ_CP075116.1 Protein Homology CDS 1163781 1164761 . - 0 ID=cds-WP_001098984.1;Parent=gene-CCO40_RS05570;Dbxref=GenBank:WP_001098984.1;Name=WP_001098984.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461679.1;locus_tag=CCO40_RS05570;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_001098984.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1164758 1165132 . - . ID=gene-CCO40_RS05575;Name=CCO40_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05575;old_locus_tag=CCO40_05575 NZ_CP075116.1 Protein Homology CDS 1164758 1165132 . - 0 ID=cds-WP_000973738.1;Parent=gene-CCO40_RS05575;Dbxref=GenBank:WP_000973738.1;Name=WP_000973738.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0008982,GO:0016301,GO:0016773,GO:0051119,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,sugar transmembrane transporter activity|0051119||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461678.1;locus_tag=CCO40_RS05575;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_000973738.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1165129 1165650 . - . ID=gene-CCO40_RS05580;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=CCO40_RS05580;old_locus_tag=CCO40_05580 NZ_CP075116.1 Protein Homology CDS 1165129 1165650 . - 0 ID=cds-WP_000480483.1;Parent=gene-CCO40_RS05580;Dbxref=GenBank:WP_000480483.1;Name=WP_000480483.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461677.1;locus_tag=CCO40_RS05580;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000480483.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1165763 1166047 . - . ID=gene-CCO40_RS05585;Name=CCO40_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05585;old_locus_tag=CCO40_05585 NZ_CP075116.1 Protein Homology CDS 1165763 1166047 . - 0 ID=cds-WP_000749979.1;Parent=gene-CCO40_RS05585;Dbxref=GenBank:WP_000749979.1;Name=WP_000749979.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461676.1;locus_tag=CCO40_RS05585;product=helix-turn-helix domain-containing protein;protein_id=WP_000749979.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1166142 1166498 . + . ID=gene-CCO40_RS05590;Name=CCO40_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05590;old_locus_tag=CCO40_05590 NZ_CP075116.1 Protein Homology CDS 1166142 1166498 . + 0 ID=cds-WP_010989065.1;Parent=gene-CCO40_RS05590;Dbxref=GenBank:WP_010989065.1;Name=WP_010989065.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461675.1;locus_tag=CCO40_RS05590;product=helix-turn-helix domain-containing protein;protein_id=WP_010989065.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1166650 1167468 . - . ID=gene-CCO40_RS05595;Name=CCO40_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05595;old_locus_tag=CCO40_05595 NZ_CP075116.1 Protein Homology CDS 1166650 1167468 . - 0 ID=cds-WP_010989064.1;Parent=gene-CCO40_RS05595;Dbxref=GenBank:WP_010989064.1;Name=WP_010989064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461674.1;locus_tag=CCO40_RS05595;product=DUF4435 domain-containing protein;protein_id=WP_010989064.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1167513 1168796 . - . ID=gene-CCO40_RS05600;Name=CCO40_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05600;old_locus_tag=CCO40_05600 NZ_CP075116.1 Protein Homology CDS 1167513 1168796 . - 0 ID=cds-WP_001520831.1;Parent=gene-CCO40_RS05600;Dbxref=GenBank:WP_001520831.1;Name=WP_001520831.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461673.1;locus_tag=CCO40_RS05600;product=AAA family ATPase;protein_id=WP_001520831.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1169299 1171368 . - . ID=gene-CCO40_RS05605;Name=CCO40_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05605;old_locus_tag=CCO40_05605 NZ_CP075116.1 Protein Homology CDS 1169299 1171368 . - 0 ID=cds-WP_001520307.1;Parent=gene-CCO40_RS05605;Dbxref=GenBank:WP_001520307.1;Name=WP_001520307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461672.1;locus_tag=CCO40_RS05605;product=DUF927 domain-containing protein;protein_id=WP_001520307.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1171404 1171619 . - . ID=gene-CCO40_RS05610;Name=CCO40_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05610;old_locus_tag=CCO40_05610 NZ_CP075116.1 Protein Homology CDS 1171404 1171619 . - 0 ID=cds-WP_000701821.1;Parent=gene-CCO40_RS05610;Dbxref=GenBank:WP_000701821.1;Name=WP_000701821.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461671.1;locus_tag=CCO40_RS05610;product=AlpA family transcriptional regulator;protein_id=WP_000701821.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1172070 1172897 . + . ID=gene-CCO40_RS05615;Name=CCO40_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05615;old_locus_tag=CCO40_05615 NZ_CP075116.1 Protein Homology CDS 1172070 1172897 . + 0 ID=cds-WP_001161781.1;Parent=gene-CCO40_RS05615;Dbxref=GenBank:WP_001161781.1;Name=WP_001161781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461670.1;locus_tag=CCO40_RS05615;product=hypothetical protein;protein_id=WP_001161781.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1173232 1174425 . - . ID=gene-CCO40_RS05620;Name=CCO40_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05620;old_locus_tag=CCO40_05620 NZ_CP075116.1 Protein Homology CDS 1173232 1174425 . - 0 ID=cds-WP_000248794.1;Parent=gene-CCO40_RS05620;Dbxref=GenBank:WP_000248794.1;Name=WP_000248794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461669.1;locus_tag=CCO40_RS05620;product=SEC-C domain-containing protein;protein_id=WP_000248794.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1174815 1175453 . - . ID=gene-CCO40_RS05625;Name=CCO40_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05625;old_locus_tag=CCO40_05625 NZ_CP075116.1 Protein Homology CDS 1174815 1175453 . - 0 ID=cds-WP_000203581.1;Parent=gene-CCO40_RS05625;Dbxref=GenBank:WP_000203581.1;Name=WP_000203581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203581.1;locus_tag=CCO40_RS05625;product=hypothetical protein;protein_id=WP_000203581.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1175455 1176700 . - . ID=gene-CCO40_RS05630;Name=CCO40_RS05630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS05630;old_locus_tag=CCO40_05630;pseudo=true NZ_CP075116.1 Protein Homology CDS 1175455 1176700 . - 0 ID=cds-CCO40_RS05630;Parent=gene-CCO40_RS05630;Note=frameshifted;Ontology_term=GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078155.1;locus_tag=CCO40_RS05630;product=integrase domain-containing protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 1176867 1177229 . - . ID=gene-CCO40_RS05635;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=CCO40_RS05635;old_locus_tag=CCO40_05635 NZ_CP075116.1 cmsearch tmRNA 1176867 1177229 . - . ID=rna-CCO40_RS05635;Parent=gene-CCO40_RS05635;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00023,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS05635;product=transfer-messenger RNA NZ_CP075116.1 cmsearch exon 1176867 1177229 . - . ID=exon-CCO40_RS05635-1;Parent=rna-CCO40_RS05635;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00023,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS05635;product=transfer-messenger RNA NZ_CP075116.1 RefSeq gene 1177301 1178464 . - . ID=gene-CCO40_RS05640;Name=CCO40_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05640;old_locus_tag=CCO40_05640 NZ_CP075116.1 Protein Homology CDS 1177301 1178464 . - 0 ID=cds-WP_010989057.1;Parent=gene-CCO40_RS05640;Dbxref=GenBank:WP_010989057.1;Name=WP_010989057.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461621.1;locus_tag=CCO40_RS05640;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_010989057.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1178472 1180652 . - . ID=gene-CCO40_RS05645;Name=CCO40_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05645;old_locus_tag=CCO40_05645 NZ_CP075116.1 Protein Homology CDS 1178472 1180652 . - 0 ID=cds-WP_000196159.1;Parent=gene-CCO40_RS05645;Dbxref=GenBank:WP_000196159.1;Name=WP_000196159.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=CCO40_RS05645;product=type I secretion system permease/ATPase;protein_id=WP_000196159.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1180649 1182058 . - . ID=gene-CCO40_RS05650;Name=CCO40_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05650;old_locus_tag=CCO40_05650 NZ_CP075116.1 Protein Homology CDS 1180649 1182058 . - 0 ID=cds-WP_000533858.1;Parent=gene-CCO40_RS05650;Dbxref=GenBank:WP_000533858.1;Name=WP_000533858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461619.1;locus_tag=CCO40_RS05650;product=TolC family outer membrane protein;protein_id=WP_000533858.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1182123 1193597 . - . ID=gene-CCO40_RS05655;Name=bapA;gbkey=Gene;gene=bapA;gene_biotype=protein_coding;locus_tag=CCO40_RS05655;old_locus_tag=CCO40_05655 NZ_CP075116.1 Protein Homology CDS 1182123 1193597 . - 0 ID=cds-WP_001237690.1;Parent=gene-CCO40_RS05655;Dbxref=GenBank:WP_001237690.1;Name=WP_001237690.1;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237670.1;locus_tag=CCO40_RS05655;product=biofilm-associated protein BapA;protein_id=WP_001237690.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1194213 1194695 . - . ID=gene-CCO40_RS05660;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=CCO40_RS05660;old_locus_tag=CCO40_05660 NZ_CP075116.1 Protein Homology CDS 1194213 1194695 . - 0 ID=cds-WP_001518569.1;Parent=gene-CCO40_RS05660;Dbxref=GenBank:WP_001518569.1;Name=WP_001518569.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461618.1;locus_tag=CCO40_RS05660;product=SsrA-binding protein SmpB;protein_id=WP_001518569.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1194884 1195321 . + . ID=gene-CCO40_RS05665;Name=CCO40_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05665;old_locus_tag=CCO40_05665 NZ_CP075116.1 Protein Homology CDS 1194884 1195321 . + 0 ID=cds-WP_001537508.1;Parent=gene-CCO40_RS05665;Dbxref=GenBank:WP_001537508.1;Name=WP_001537508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543334.1;locus_tag=CCO40_RS05665;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_001537508.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1195311 1195601 . + . ID=gene-CCO40_RS05670;Name=CCO40_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05670;old_locus_tag=CCO40_05670 NZ_CP075116.1 Protein Homology CDS 1195311 1195601 . + 0 ID=cds-WP_001112990.1;Parent=gene-CCO40_RS05670;Dbxref=GenBank:WP_001112990.1;Name=WP_001112990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=CCO40_RS05670;product=RnfH family protein;protein_id=WP_001112990.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1195767 1196105 . - . ID=gene-CCO40_RS05675;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=CCO40_RS05675;old_locus_tag=CCO40_05675 NZ_CP075116.1 Protein Homology CDS 1195767 1196105 . - 0 ID=cds-WP_001203445.1;Parent=gene-CCO40_RS05675;Dbxref=GenBank:WP_001203445.1;Name=WP_001203445.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461615.1;locus_tag=CCO40_RS05675;product=outer membrane protein assembly factor BamE;protein_id=WP_001203445.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1196254 1197915 . - . ID=gene-CCO40_RS05680;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=CCO40_RS05680;old_locus_tag=CCO40_05680 NZ_CP075116.1 Protein Homology CDS 1196254 1197915 . - 0 ID=cds-WP_094889346.1;Parent=gene-CCO40_RS05680;Dbxref=GenBank:WP_094889346.1;Name=WP_094889346.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=CCO40_RS05680;product=DNA repair protein RecN;protein_id=WP_094889346.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1198001 1198879 . - . ID=gene-CCO40_RS05685;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=CCO40_RS05685;old_locus_tag=CCO40_05685 NZ_CP075116.1 Protein Homology CDS 1198001 1198879 . - 0 ID=cds-WP_001059155.1;Parent=gene-CCO40_RS05685;Dbxref=GenBank:WP_001059155.1;Name=WP_001059155.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=CCO40_RS05685;product=NAD(+) kinase;protein_id=WP_001059155.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1199002 1199592 . + . ID=gene-CCO40_RS05690;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=CCO40_RS05690;old_locus_tag=CCO40_05690 NZ_CP075116.1 Protein Homology CDS 1199002 1199592 . + 0 ID=cds-WP_001518875.1;Parent=gene-CCO40_RS05690;Dbxref=GenBank:WP_001518875.1;Name=WP_001518875.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461611.1;locus_tag=CCO40_RS05690;product=nucleotide exchange factor GrpE;protein_id=WP_001518875.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1199627 1200232 . - . ID=gene-CCO40_RS05695;Name=CCO40_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05695;old_locus_tag=CCO40_05695 NZ_CP075116.1 Protein Homology CDS 1199627 1200232 . - 0 ID=cds-WP_001287931.1;Parent=gene-CCO40_RS05695;Dbxref=GenBank:WP_001287931.1;Name=WP_001287931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461610.1;locus_tag=CCO40_RS05695;product=DUF6630 family protein;protein_id=WP_001287931.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1200353 1201639 . - . ID=gene-CCO40_RS05700;Name=CCO40_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05700;old_locus_tag=CCO40_05700 NZ_CP075116.1 Protein Homology CDS 1200353 1201639 . - 0 ID=cds-WP_127172650.1;Parent=gene-CCO40_RS05700;Dbxref=GenBank:WP_127172650.1;Name=WP_127172650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=CCO40_RS05700;product=HlyC/CorC family transporter;protein_id=WP_127172650.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1201659 1202450 . - . ID=gene-CCO40_RS05705;Name=CCO40_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05705;old_locus_tag=CCO40_05705 NZ_CP075116.1 Protein Homology CDS 1201659 1202450 . - 0 ID=cds-WP_001537507.1;Parent=gene-CCO40_RS05705;Dbxref=GenBank:WP_001537507.1;Name=WP_001537507.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461608.1;locus_tag=CCO40_RS05705;product=cytochrome C assembly family protein;protein_id=WP_001537507.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1202616 1203977 . + . ID=gene-CCO40_RS05710;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=CCO40_RS05710;old_locus_tag=CCO40_05710 NZ_CP075116.1 Protein Homology CDS 1202616 1203977 . + 0 ID=cds-WP_000460052.1;Parent=gene-CCO40_RS05710;Dbxref=GenBank:WP_000460052.1;Name=WP_000460052.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence receptor activity|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=CCO40_RS05710;product=signal recognition particle protein;protein_id=WP_000460052.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1204291 1204539 . + . ID=gene-CCO40_RS05715;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=CCO40_RS05715;old_locus_tag=CCO40_05715 NZ_CP075116.1 Protein Homology CDS 1204291 1204539 . + 0 ID=cds-WP_000256453.1;Parent=gene-CCO40_RS05715;Dbxref=GenBank:WP_000256453.1;Name=WP_000256453.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=CCO40_RS05715;product=30S ribosomal protein S16;protein_id=WP_000256453.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1204558 1205106 . + . ID=gene-CCO40_RS05720;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=CCO40_RS05720;old_locus_tag=CCO40_05720 NZ_CP075116.1 Protein Homology CDS 1204558 1205106 . + 0 ID=cds-WP_000043266.1;Parent=gene-CCO40_RS05720;Dbxref=GenBank:WP_000043266.1;Name=WP_000043266.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=CCO40_RS05720;product=ribosome maturation factor RimM;protein_id=WP_000043266.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1205151 1205918 . + . ID=gene-CCO40_RS05725;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=CCO40_RS05725;old_locus_tag=CCO40_05725 NZ_CP075116.1 Protein Homology CDS 1205151 1205918 . + 0 ID=cds-WP_000469807.1;Parent=gene-CCO40_RS05725;Dbxref=GenBank:WP_000469807.1;Name=WP_000469807.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=CCO40_RS05725;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000469807.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1205959 1206306 . + . ID=gene-CCO40_RS05730;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=CCO40_RS05730;old_locus_tag=CCO40_05730 NZ_CP075116.1 Protein Homology CDS 1205959 1206306 . + 0 ID=cds-WP_000065257.1;Parent=gene-CCO40_RS05730;Dbxref=GenBank:WP_000065257.1;Name=WP_000065257.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=CCO40_RS05730;product=50S ribosomal protein L19;protein_id=WP_000065257.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1206463 1207683 . - . ID=gene-CCO40_RS05735;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;gene_synonym=yfiN;locus_tag=CCO40_RS05735;old_locus_tag=CCO40_05735 NZ_CP075116.1 Protein Homology CDS 1206463 1207683 . - 0 ID=cds-WP_001030983.1;Parent=gene-CCO40_RS05735;Dbxref=GenBank:WP_001030983.1;Name=WP_001030983.1;Ontology_term=GO:0007165,GO:0052621,GO:0005886;gbkey=CDS;gene=dgcN;go_component=plasma membrane|0005886||IEA;go_function=diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=CCO40_RS05735;product=diguanylate cyclase DgcN/YfiN;protein_id=WP_001030983.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1207676 1208194 . - . ID=gene-CCO40_RS05740;Name=yfiR;gbkey=Gene;gene=yfiR;gene_biotype=protein_coding;locus_tag=CCO40_RS05740;old_locus_tag=CCO40_05740 NZ_CP075116.1 Protein Homology CDS 1207676 1208194 . - 0 ID=cds-WP_001212379.1;Parent=gene-CCO40_RS05740;Dbxref=GenBank:WP_001212379.1;Name=WP_001212379.1;Ontology_term=GO:0007165,GO:0030288;gbkey=CDS;gene=yfiR;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461601.1;locus_tag=CCO40_RS05740;product=regulatory sequestration protein YfiR;protein_id=WP_001212379.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1208634 1209704 . + . ID=gene-CCO40_RS05745;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=CCO40_RS05745;old_locus_tag=CCO40_05745 NZ_CP075116.1 Protein Homology CDS 1208634 1209704 . + 0 ID=cds-WP_001168062.1;Parent=gene-CCO40_RS05745;Dbxref=GenBank:WP_001168062.1;Name=WP_001168062.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461600.1;locus_tag=CCO40_RS05745;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_001168062.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1209714 1210835 . + . ID=gene-CCO40_RS05750;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=CCO40_RS05750;old_locus_tag=CCO40_05750 NZ_CP075116.1 Protein Homology CDS 1209714 1210835 . + 0 ID=cds-WP_000225191.1;Parent=gene-CCO40_RS05750;Dbxref=GenBank:WP_000225191.1;Name=WP_000225191.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=L-tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461599.1;locus_tag=CCO40_RS05750;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_000225191.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1210893 1211801 . + . ID=gene-CCO40_RS05755;Name=CCO40_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05755;old_locus_tag=CCO40_05755 NZ_CP075116.1 Protein Homology CDS 1210893 1211801 . + 0 ID=cds-WP_000210995.1;Parent=gene-CCO40_RS05755;Dbxref=GenBank:WP_000210995.1;Name=WP_000210995.1;Ontology_term=GO:0005509,GO:0016787,GO:0046872;gbkey=CDS;go_function=calcium ion binding|0005509||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461598.1;locus_tag=CCO40_RS05755;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_000210995.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1211762 1212922 . - . ID=gene-CCO40_RS05760;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=CCO40_RS05760;old_locus_tag=CCO40_05760 NZ_CP075116.1 Protein Homology CDS 1211762 1212922 . - 0 ID=cds-WP_000200080.1;Parent=gene-CCO40_RS05760;Dbxref=GenBank:WP_000200080.1;Name=WP_000200080.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461597.1;locus_tag=CCO40_RS05760;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_000200080.1;transl_table=11 NZ_CP075116.1 cmsearch sequence_feature 1212945 1213070 . - . ID=id-NZ_CP075116.1:1212945..1213070;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF01859,COORDINATES: profile:INFERNAL:1.1.5 NZ_CP075116.1 RefSeq gene 1213022 1213069 . - . ID=gene-CCO40_RS05765;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=CCO40_RS05765;old_locus_tag=CCO40_05765 NZ_CP075116.1 Protein Homology CDS 1213022 1213069 . - 0 ID=cds-WP_010989056.1;Parent=gene-CCO40_RS05765;Dbxref=GenBank:WP_010989056.1;Name=WP_010989056.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449055.1;locus_tag=CCO40_RS05765;product=pheA operon leader peptide PheL;protein_id=WP_010989056.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1213173 1213511 . - . ID=gene-CCO40_RS05770;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=CCO40_RS05770;old_locus_tag=CCO40_05770 NZ_CP075116.1 Protein Homology CDS 1213173 1213511 . - 0 ID=cds-WP_000178449.1;Parent=gene-CCO40_RS05770;Dbxref=GenBank:WP_000178449.1;Name=WP_000178449.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461595.1;locus_tag=CCO40_RS05770;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178449.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1213783 1214520 . - . ID=gene-CCO40_RS05775;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=CCO40_RS05775;old_locus_tag=CCO40_05775 NZ_CP075116.1 Protein Homology CDS 1213783 1214520 . - 0 ID=cds-WP_000197660.1;Parent=gene-CCO40_RS05775;Dbxref=GenBank:WP_000197660.1;Name=WP_000197660.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=CCO40_RS05775;product=outer membrane protein assembly factor BamD;protein_id=WP_000197660.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1214652 1215632 . + . ID=gene-CCO40_RS05780;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=CCO40_RS05780;old_locus_tag=CCO40_05780 NZ_CP075116.1 Protein Homology CDS 1214652 1215632 . + 0 ID=cds-WP_000079130.1;Parent=gene-CCO40_RS05780;Dbxref=GenBank:WP_000079130.1;Name=WP_000079130.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=CCO40_RS05780;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079130.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1215629 1216360 . + . ID=gene-CCO40_RS05785;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=CCO40_RS05785;old_locus_tag=CCO40_05785 NZ_CP075116.1 Protein Homology CDS 1215629 1216360 . + 0 ID=cds-WP_000992639.1;Parent=gene-CCO40_RS05785;Dbxref=GenBank:WP_000992639.1;Name=WP_000992639.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=CCO40_RS05785;product=purine nucleoside phosphorylase YfiH;protein_id=WP_000992639.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1216490 1219063 . + . ID=gene-CCO40_RS05790;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=CCO40_RS05790;old_locus_tag=CCO40_05790 NZ_CP075116.1 Protein Homology CDS 1216490 1219063 . + 0 ID=cds-WP_001235094.1;Parent=gene-CCO40_RS05790;Dbxref=GenBank:WP_001235094.1;Name=WP_001235094.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=CCO40_RS05790;product=ATP-dependent chaperone ClpB;protein_id=WP_001235094.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1219517 1221058 . + . ID=gene-CCO40_RS05795;Name=CCO40_RS05795;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO40_RS05795;old_locus_tag=CCO40_05795 NZ_CP075116.1 cmsearch rRNA 1219517 1221058 . + . ID=rna-CCO40_RS05795;Parent=gene-CCO40_RS05795;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS05795;product=16S ribosomal RNA NZ_CP075116.1 cmsearch exon 1219517 1221058 . + . ID=exon-CCO40_RS05795-1;Parent=rna-CCO40_RS05795;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS05795;product=16S ribosomal RNA NZ_CP075116.1 RefSeq gene 1221144 1221219 . + . ID=gene-CCO40_RS05800;Name=CCO40_RS05800;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS05800;old_locus_tag=CCO40_05800 NZ_CP075116.1 tRNAscan-SE tRNA 1221144 1221219 . + . ID=rna-CCO40_RS05800;Parent=gene-CCO40_RS05800;anticodon=(pos:1221178..1221180);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS05800;product=tRNA-Glu NZ_CP075116.1 tRNAscan-SE exon 1221144 1221219 . + . ID=exon-CCO40_RS05800-1;Parent=rna-CCO40_RS05800;anticodon=(pos:1221178..1221180);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS05800;product=tRNA-Glu NZ_CP075116.1 RefSeq gene 1221411 1224418 . + . ID=gene-CCO40_RS05805;Name=CCO40_RS05805;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO40_RS05805;old_locus_tag=CCO40_05805 NZ_CP075116.1 cmsearch rRNA 1221411 1224418 . + . ID=rna-CCO40_RS05805;Parent=gene-CCO40_RS05805;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS05805;product=23S ribosomal RNA NZ_CP075116.1 cmsearch exon 1221411 1224418 . + . ID=exon-CCO40_RS05805-1;Parent=rna-CCO40_RS05805;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS05805;product=23S ribosomal RNA NZ_CP075116.1 RefSeq gene 1224616 1224731 . + . ID=gene-CCO40_RS05810;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO40_RS05810;old_locus_tag=CCO40_05810 NZ_CP075116.1 cmsearch rRNA 1224616 1224731 . + . ID=rna-CCO40_RS05810;Parent=gene-CCO40_RS05810;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS05810;product=5S ribosomal RNA NZ_CP075116.1 cmsearch exon 1224616 1224731 . + . ID=exon-CCO40_RS05810-1;Parent=rna-CCO40_RS05810;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS05810;product=5S ribosomal RNA NZ_CP075116.1 RefSeq gene 1224940 1225395 . + . ID=gene-CCO40_RS05815;Name=CCO40_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05815;old_locus_tag=CCO40_05815 NZ_CP075116.1 Protein Homology CDS 1224940 1225395 . + 0 ID=cds-WP_000985648.1;Parent=gene-CCO40_RS05815;Dbxref=GenBank:WP_000985648.1;Name=WP_000985648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=CCO40_RS05815;product=DUF4385 domain-containing protein;protein_id=WP_000985648.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1225499 1226800 . + . ID=gene-CCO40_RS05820;Name=CCO40_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05820;old_locus_tag=CCO40_05820 NZ_CP075116.1 Protein Homology CDS 1225499 1226800 . + 0 ID=cds-WP_000807810.1;Parent=gene-CCO40_RS05820;Dbxref=GenBank:WP_000807810.1;Name=WP_000807810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461589.1;locus_tag=CCO40_RS05820;product=MFS transporter;protein_id=WP_000807810.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1226797 1227120 . - . ID=gene-CCO40_RS05825;Name=CCO40_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05825;old_locus_tag=CCO40_05825 NZ_CP075116.1 Protein Homology CDS 1226797 1227120 . - 0 ID=cds-WP_001264478.1;Parent=gene-CCO40_RS05825;Dbxref=GenBank:WP_001264478.1;Name=WP_001264478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461588.1;locus_tag=CCO40_RS05825;product=YfiM family lipoprotein;protein_id=WP_001264478.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1227165 1228520 . - . ID=gene-CCO40_RS05830;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=CCO40_RS05830;old_locus_tag=CCO40_05830 NZ_CP075116.1 Protein Homology CDS 1227165 1228520 . - 0 ID=cds-WP_000949286.1;Parent=gene-CCO40_RS05830;Dbxref=GenBank:WP_000949286.1;Name=WP_000949286.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=CCO40_RS05830;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949286.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1228635 1231295 . - . ID=gene-CCO40_RS05840;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=CCO40_RS05840;old_locus_tag=CCO40_05840 NZ_CP075116.1 Protein Homology CDS 1228635 1231295 . - 0 ID=cds-WP_094889329.1;Parent=gene-CCO40_RS05840;Dbxref=GenBank:WP_094889329.1;Name=WP_094889329.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=CCO40_RS05840;product=protein lysine acetyltransferase;protein_id=WP_094889329.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1231349 1232029 . - . ID=gene-CCO40_RS05845;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=CCO40_RS05845;old_locus_tag=CCO40_05845 NZ_CP075116.1 Protein Homology CDS 1231349 1232029 . - 0 ID=cds-WP_094889330.1;Parent=gene-CCO40_RS05845;Dbxref=GenBank:WP_094889330.1;Name=WP_094889330.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461585.1;locus_tag=CCO40_RS05845;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_094889330.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1232102 1232521 . - . ID=gene-CCO40_RS05850;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=CCO40_RS05850;old_locus_tag=CCO40_05850 NZ_CP075116.1 Protein Homology CDS 1232102 1232521 . - 0 ID=cds-WP_001098732.1;Parent=gene-CCO40_RS05850;Dbxref=GenBank:WP_001098732.1;Name=WP_001098732.1;Ontology_term=GO:0045454,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=CCO40_RS05850;product=thioredoxin TrxC;protein_id=WP_001098732.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1232725 1233762 . + . ID=gene-CCO40_RS05855;Name=CCO40_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05855;old_locus_tag=CCO40_05855 NZ_CP075116.1 Protein Homology CDS 1232725 1233762 . + 0 ID=cds-WP_000997368.1;Parent=gene-CCO40_RS05855;Dbxref=GenBank:WP_000997368.1;Name=WP_000997368.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461583.1;locus_tag=CCO40_RS05855;product=tRNA/rRNA methyltransferase;protein_id=WP_000997368.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1233878 1234567 . - . ID=gene-CCO40_RS05860;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=CCO40_RS05860;old_locus_tag=CCO40_05860 NZ_CP075116.1 Protein Homology CDS 1233878 1234567 . - 0 ID=cds-WP_000179978.1;Parent=gene-CCO40_RS05860;Dbxref=GenBank:WP_000179978.1;Name=WP_000179978.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461582.1;locus_tag=CCO40_RS05860;product=uracil-DNA glycosylase;protein_id=WP_000179978.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1234886 1235269 . + . ID=gene-CCO40_RS05865;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=CCO40_RS05865;old_locus_tag=CCO40_05865 NZ_CP075116.1 Protein Homology CDS 1234886 1235269 . + 0 ID=cds-WP_000627811.1;Parent=gene-CCO40_RS05865;Dbxref=GenBank:WP_000627811.1;Name=WP_000627811.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=CCO40_RS05865;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627811.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1235331 1235918 . - . ID=gene-CCO40_RS05870;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=CCO40_RS05870;old_locus_tag=CCO40_05870 NZ_CP075116.1 Protein Homology CDS 1235331 1235918 . - 0 ID=cds-WP_000188415.1;Parent=gene-CCO40_RS05870;Dbxref=GenBank:WP_000188415.1;Name=WP_000188415.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461580.1;locus_tag=CCO40_RS05870;product=cysteine/O-acetylserine transporter;protein_id=WP_000188415.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1236021 1236920 . + . ID=gene-CCO40_RS05875;Name=CCO40_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05875;old_locus_tag=CCO40_05875 NZ_CP075116.1 Protein Homology CDS 1236021 1236920 . + 0 ID=cds-WP_001670786.1;Parent=gene-CCO40_RS05875;Dbxref=GenBank:WP_001670786.1;Name=WP_001670786.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=CCO40_RS05875;product=LysR family transcriptional regulator;protein_id=WP_001670786.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1236938 1238272 . - . ID=gene-CCO40_RS05880;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=CCO40_RS05880;old_locus_tag=CCO40_05880 NZ_CP075116.1 Protein Homology CDS 1236938 1238272 . - 0 ID=cds-WP_000219174.1;Parent=gene-CCO40_RS05880;Dbxref=GenBank:WP_000219174.1;Name=WP_000219174.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461578.1;locus_tag=CCO40_RS05880;product=ATP-dependent RNA helicase SrmB;protein_id=WP_000219174.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1238403 1239140 . + . ID=gene-CCO40_RS05885;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=CCO40_RS05885;old_locus_tag=CCO40_05885 NZ_CP075116.1 Protein Homology CDS 1238403 1239140 . + 0 ID=cds-WP_000083343.1;Parent=gene-CCO40_RS05885;Dbxref=GenBank:WP_000083343.1;Name=WP_000083343.1;Ontology_term=GO:0030488,GO:0003676,GO:7770054;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA(Val) (adenine(37)-N6)-methyltransferase activity|7770054||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=CCO40_RS05885;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_000083343.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1239125 1240747 . - . ID=gene-CCO40_RS05890;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=CCO40_RS05890;old_locus_tag=CCO40_05890 NZ_CP075116.1 Protein Homology CDS 1239125 1240747 . - 0 ID=cds-WP_000989187.1;Parent=gene-CCO40_RS05890;Dbxref=GenBank:WP_000989187.1;Name=WP_000989187.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461576.1;locus_tag=CCO40_RS05890;product=L-aspartate oxidase;protein_id=WP_000989187.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1241012 1241176 . + . ID=gene-CCO40_RS05895;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=CCO40_RS05895;old_locus_tag=CCO40_05895 NZ_CP075116.1 Protein Homology CDS 1241012 1241176 . + 0 ID=cds-WP_014344135.1;Parent=gene-CCO40_RS05895;Dbxref=GenBank:WP_014344135.1;Name=WP_014344135.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344135.1;locus_tag=CCO40_RS05895;product=rpoE leader peptide RseD;protein_id=WP_014344135.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1241173 1241748 . + . ID=gene-CCO40_RS05900;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=CCO40_RS05900;old_locus_tag=CCO40_05900 NZ_CP075116.1 Protein Homology CDS 1241173 1241748 . + 0 ID=cds-WP_000003307.1;Parent=gene-CCO40_RS05900;Dbxref=GenBank:WP_000003307.1;Name=WP_000003307.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=CCO40_RS05900;product=RNA polymerase sigma factor RpoE;protein_id=WP_000003307.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1241780 1242430 . + . ID=gene-CCO40_RS05905;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=CCO40_RS05905;old_locus_tag=CCO40_05905 NZ_CP075116.1 Protein Homology CDS 1241780 1242430 . + 0 ID=cds-WP_001168374.1;Parent=gene-CCO40_RS05905;Dbxref=GenBank:WP_001168374.1;Name=WP_001168374.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=CCO40_RS05905;product=anti-sigma-E factor RseA;protein_id=WP_001168374.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1242430 1243386 . + . ID=gene-CCO40_RS05910;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=CCO40_RS05910;old_locus_tag=CCO40_05910 NZ_CP075116.1 Protein Homology CDS 1242430 1243386 . + 0 ID=cds-WP_000812019.1;Parent=gene-CCO40_RS05910;Dbxref=GenBank:WP_000812019.1;Name=WP_000812019.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461573.1;locus_tag=CCO40_RS05910;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812019.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1243383 1243862 . + . ID=gene-CCO40_RS05915;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=CCO40_RS05915;old_locus_tag=CCO40_05915 NZ_CP075116.1 Protein Homology CDS 1243383 1243862 . + 0 ID=cds-WP_094889331.1;Parent=gene-CCO40_RS05915;Dbxref=GenBank:WP_094889331.1;Name=WP_094889331.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461572.1;locus_tag=CCO40_RS05915;product=SoxR-reducing system protein RseC;protein_id=WP_094889331.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1244113 1245912 . + . ID=gene-CCO40_RS05920;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=CCO40_RS05920;old_locus_tag=CCO40_05920 NZ_CP075116.1 Protein Homology CDS 1244113 1245912 . + 0 ID=cds-WP_000790154.1;Parent=gene-CCO40_RS05920;Dbxref=GenBank:WP_000790154.1;Name=WP_000790154.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461518.1;locus_tag=CCO40_RS05920;product=translation elongation factor 4;protein_id=WP_000790154.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1245929 1246903 . + . ID=gene-CCO40_RS05925;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CCO40_RS05925;old_locus_tag=CCO40_05925 NZ_CP075116.1 Protein Homology CDS 1245929 1246903 . + 0 ID=cds-WP_000002559.1;Parent=gene-CCO40_RS05925;Dbxref=GenBank:WP_000002559.1;Name=WP_000002559.1;Ontology_term=GO:0051604,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461517.1;locus_tag=CCO40_RS05925;product=signal peptidase I;protein_id=WP_000002559.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1247177 1247857 . + . ID=gene-CCO40_RS05930;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=CCO40_RS05930;old_locus_tag=CCO40_05930 NZ_CP075116.1 Protein Homology CDS 1247177 1247857 . + 0 ID=cds-WP_001068341.1;Parent=gene-CCO40_RS05930;Dbxref=GenBank:WP_001068341.1;Name=WP_001068341.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=CCO40_RS05930;product=ribonuclease III;protein_id=WP_001068341.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1247854 1248759 . + . ID=gene-CCO40_RS05935;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=CCO40_RS05935;old_locus_tag=CCO40_05935 NZ_CP075116.1 Protein Homology CDS 1247854 1248759 . + 0 ID=cds-WP_000102230.1;Parent=gene-CCO40_RS05935;Dbxref=GenBank:WP_000102230.1;Name=WP_000102230.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461515.1;locus_tag=CCO40_RS05935;product=GTPase Era;protein_id=WP_000102230.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1248771 1249499 . + . ID=gene-CCO40_RS05940;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=CCO40_RS05940;old_locus_tag=CCO40_05940 NZ_CP075116.1 Protein Homology CDS 1248771 1249499 . + 0 ID=cds-WP_000399380.1;Parent=gene-CCO40_RS05940;Dbxref=GenBank:WP_000399380.1;Name=WP_000399380.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461514.1;locus_tag=CCO40_RS05940;product=DNA repair protein RecO;protein_id=WP_000399380.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1249511 1250242 . + . ID=gene-CCO40_RS05945;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=CCO40_RS05945;old_locus_tag=CCO40_05945 NZ_CP075116.1 Protein Homology CDS 1249511 1250242 . + 0 ID=cds-WP_000818972.1;Parent=gene-CCO40_RS05945;Dbxref=GenBank:WP_000818972.1;Name=WP_000818972.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461513.1;locus_tag=CCO40_RS05945;product=pyridoxine 5'-phosphate synthase;protein_id=WP_000818972.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1250242 1250622 . + . ID=gene-CCO40_RS05950;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=CCO40_RS05950;old_locus_tag=CCO40_05950 NZ_CP075116.1 Protein Homology CDS 1250242 1250622 . + 0 ID=cds-WP_000986043.1;Parent=gene-CCO40_RS05950;Dbxref=GenBank:WP_000986043.1;Name=WP_000986043.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461512.1;locus_tag=CCO40_RS05950;product=holo-ACP synthase;protein_id=WP_000986043.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1250734 1250994 . - . ID=gene-CCO40_RS05955;Name=CCO40_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05955;old_locus_tag=CCO40_05955 NZ_CP075116.1 Protein Homology CDS 1250734 1250994 . - 0 ID=cds-WP_001196290.1;Parent=gene-CCO40_RS05955;Dbxref=GenBank:WP_001196290.1;Name=WP_001196290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461511.1;locus_tag=CCO40_RS05955;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_001196290.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1251032 1251958 . - . ID=gene-CCO40_RS05960;Name=CCO40_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05960;old_locus_tag=CCO40_05960 NZ_CP075116.1 Protein Homology CDS 1251032 1251958 . - 0 ID=cds-WP_001022463.1;Parent=gene-CCO40_RS05960;Dbxref=GenBank:WP_001022463.1;Name=WP_001022463.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461510.1;locus_tag=CCO40_RS05960;product=LysR family transcriptional regulator;protein_id=WP_001022463.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1252074 1253270 . + . ID=gene-CCO40_RS05965;Name=CCO40_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05965;old_locus_tag=CCO40_05965 NZ_CP075116.1 Protein Homology CDS 1252074 1253270 . + 0 ID=cds-WP_001276365.1;Parent=gene-CCO40_RS05965;Dbxref=GenBank:WP_001276365.1;Name=WP_001276365.1;Ontology_term=GO:0015129;gbkey=CDS;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=CCO40_RS05965;product=L-lactate MFS transporter;protein_id=WP_001276365.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1253292 1254209 . + . ID=gene-CCO40_RS05970;Name=CCO40_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05970;old_locus_tag=CCO40_05970 NZ_CP075116.1 Protein Homology CDS 1253292 1254209 . + 0 ID=cds-WP_000684022.1;Parent=gene-CCO40_RS05970;Dbxref=GenBank:WP_000684022.1;Name=WP_000684022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461508.1;locus_tag=CCO40_RS05970;product=oxidoreductase;protein_id=WP_000684022.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1254248 1255096 . - . ID=gene-CCO40_RS05975;Name=CCO40_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05975;old_locus_tag=CCO40_05975 NZ_CP075116.1 Protein Homology CDS 1254248 1255096 . - 0 ID=cds-WP_000995703.1;Parent=gene-CCO40_RS05975;Dbxref=GenBank:WP_000995703.1;Name=WP_000995703.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=CCO40_RS05975;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000995703.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1255212 1256105 . + . ID=gene-CCO40_RS05980;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=CCO40_RS05980;old_locus_tag=CCO40_05980 NZ_CP075116.1 Protein Homology CDS 1255212 1256105 . + 0 ID=cds-WP_001048530.1;Parent=gene-CCO40_RS05980;Dbxref=GenBank:WP_001048530.1;Name=WP_001048530.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461506.1;locus_tag=CCO40_RS05980;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_001048530.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1256116 1257477 . + . ID=gene-CCO40_RS05985;Name=CCO40_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS05985;old_locus_tag=CCO40_05985 NZ_CP075116.1 Protein Homology CDS 1256116 1257477 . + 0 ID=cds-WP_000361663.1;Parent=gene-CCO40_RS05985;Dbxref=GenBank:WP_000361663.1;Name=WP_000361663.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=CCO40_RS05985;product=PTS transporter subunit EIIC;protein_id=WP_000361663.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1257481 1258116 . + . ID=gene-CCO40_RS05990;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=CCO40_RS05990;old_locus_tag=CCO40_05990 NZ_CP075116.1 Protein Homology CDS 1257481 1258116 . + 0 ID=cds-WP_000253558.1;Parent=gene-CCO40_RS05990;Dbxref=GenBank:WP_000253558.1;Name=WP_000253558.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=CCO40_RS05990;product=phosphatidylglycerophosphatase C;protein_id=WP_000253558.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1258141 1258692 . + . ID=gene-CCO40_RS05995;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=CCO40_RS05995;old_locus_tag=CCO40_05995 NZ_CP075116.1 Protein Homology CDS 1258141 1258692 . + 0 ID=cds-WP_001134566.1;Parent=gene-CCO40_RS05995;Dbxref=GenBank:WP_001134566.1;Name=WP_001134566.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461503.1;locus_tag=CCO40_RS05995;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_001134566.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1258743 1260287 . - . ID=gene-CCO40_RS06000;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=CCO40_RS06000;old_locus_tag=CCO40_06000 NZ_CP075116.1 Protein Homology CDS 1258743 1260287 . - 0 ID=cds-WP_000734248.1;Parent=gene-CCO40_RS06000;Dbxref=GenBank:WP_000734248.1;Name=WP_000734248.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=CCO40_RS06000;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_000734248.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1260288 1260521 . - . ID=gene-CCO40_RS06005;Name=CCO40_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06005;old_locus_tag=CCO40_06005 NZ_CP075116.1 Protein Homology CDS 1260288 1260521 . - 0 ID=cds-WP_001747289.1;Parent=gene-CCO40_RS06005;Dbxref=GenBank:WP_001747289.1;Name=WP_001747289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461501.1;locus_tag=CCO40_RS06005;product=hypothetical protein;protein_id=WP_001747289.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1260543 1264430 . + . ID=gene-CCO40_RS06010;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=CCO40_RS06010;old_locus_tag=CCO40_06010 NZ_CP075116.1 Protein Homology CDS 1260543 1264430 . + 0 ID=cds-WP_000970046.1;Parent=gene-CCO40_RS06010;Dbxref=GenBank:WP_000970046.1;Name=WP_000970046.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461500.1;locus_tag=CCO40_RS06010;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_000970046.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1265080 1266510 . + . ID=gene-CCO40_RS06015;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=CCO40_RS06015;old_locus_tag=CCO40_06015 NZ_CP075116.1 Protein Homology CDS 1265080 1266510 . + 0 ID=cds-WP_001670672.1;Parent=gene-CCO40_RS06015;Dbxref=GenBank:WP_001670672.1;Name=WP_001670672.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001676035.1;locus_tag=CCO40_RS06015;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_001670672.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1266512 1267276 . + . ID=gene-CCO40_RS06020;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=CCO40_RS06020;old_locus_tag=CCO40_06020 NZ_CP075116.1 Protein Homology CDS 1266512 1267276 . + 0 ID=cds-WP_001054236.1;Parent=gene-CCO40_RS06020;Dbxref=GenBank:WP_001054236.1;Name=WP_001054236.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461498.1;locus_tag=CCO40_RS06020;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_001054236.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1267276 1268610 . + . ID=gene-CCO40_RS06025;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=CCO40_RS06025;old_locus_tag=CCO40_06025 NZ_CP075116.1 Protein Homology CDS 1267276 1268610 . + 0 ID=cds-WP_024131115.1;Parent=gene-CCO40_RS06025;Dbxref=GenBank:WP_024131115.1;Name=WP_024131115.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311447.1;locus_tag=CCO40_RS06025;product=two-component system response regulator GlrR;protein_id=WP_024131115.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1268687 1269025 . + . ID=gene-CCO40_RS06030;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=CCO40_RS06030;old_locus_tag=CCO40_06030 NZ_CP075116.1 Protein Homology CDS 1268687 1269025 . + 0 ID=cds-WP_000717694.1;Parent=gene-CCO40_RS06030;Dbxref=GenBank:WP_000717694.1;Name=WP_000717694.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=CCO40_RS06030;product=nitrogen regulatory protein P-II;protein_id=WP_000717694.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1269074 1270534 . - . ID=gene-CCO40_RS06035;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=CCO40_RS06035;old_locus_tag=CCO40_06035 NZ_CP075116.1 Protein Homology CDS 1269074 1270534 . - 0 ID=cds-WP_000856793.1;Parent=gene-CCO40_RS06035;Dbxref=GenBank:WP_000856793.1;Name=WP_000856793.1;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461495.1;locus_tag=CCO40_RS06035;product=dipeptide permease DtpD;protein_id=WP_000856793.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1270590 1272734 . - . ID=gene-CCO40_RS06040;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=CCO40_RS06040;old_locus_tag=CCO40_06040 NZ_CP075116.1 Protein Homology CDS 1270590 1272734 . - 0 ID=cds-WP_001100652.1;Parent=gene-CCO40_RS06040;Dbxref=GenBank:WP_001100652.1;Name=WP_001100652.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461494.1;locus_tag=CCO40_RS06040;product=lysine decarboxylase CadA;protein_id=WP_001100652.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1272817 1274148 . - . ID=gene-CCO40_RS06045;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=CCO40_RS06045;old_locus_tag=CCO40_06045 NZ_CP075116.1 Protein Homology CDS 1272817 1274148 . - 0 ID=cds-WP_000100008.1;Parent=gene-CCO40_RS06045;Dbxref=GenBank:WP_000100008.1;Name=WP_000100008.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=CCO40_RS06045;product=cadaverine/lysine antiporter;protein_id=WP_000100008.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1274509 1276053 . - . ID=gene-CCO40_RS06050;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=CCO40_RS06050;old_locus_tag=CCO40_06050 NZ_CP075116.1 Protein Homology CDS 1274509 1276053 . - 0 ID=cds-WP_001187150.1;Parent=gene-CCO40_RS06050;Dbxref=GenBank:WP_001187150.1;Name=WP_001187150.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=CCO40_RS06050;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_001187150.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1276235 1277425 . - . ID=gene-CCO40_RS06055;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=CCO40_RS06055;old_locus_tag=CCO40_06055 NZ_CP075116.1 Protein Homology CDS 1276235 1277425 . - 0 ID=cds-WP_000883152.1;Parent=gene-CCO40_RS06055;Dbxref=GenBank:WP_000883152.1;Name=WP_000883152.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase [NAD(P)H] activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461491.1;locus_tag=CCO40_RS06055;product=NO-inducible flavohemoprotein;protein_id=WP_000883152.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1277750 1279003 . + . ID=gene-CCO40_RS06060;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=CCO40_RS06060;old_locus_tag=CCO40_06060 NZ_CP075116.1 Protein Homology CDS 1277750 1279003 . + 0 ID=cds-WP_000919178.1;Parent=gene-CCO40_RS06060;Dbxref=GenBank:WP_000919178.1;Name=WP_000919178.1;Ontology_term=GO:0006545,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process|0006545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=CCO40_RS06060;product=serine hydroxymethyltransferase;protein_id=WP_000919178.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1279199 1280338 . + . ID=gene-CCO40_RS06065;Name=CCO40_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06065;old_locus_tag=CCO40_06065 NZ_CP075116.1 Protein Homology CDS 1279199 1280338 . + 0 ID=cds-WP_001173731.1;Parent=gene-CCO40_RS06065;Dbxref=GenBank:WP_001173731.1;Name=WP_001173731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461489.1;locus_tag=CCO40_RS06065;product=3-phenylpropionate MFS transporter;protein_id=WP_001173731.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1280333 1281610 . - . ID=gene-CCO40_RS06070;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=CCO40_RS06070;old_locus_tag=CCO40_06070 NZ_CP075116.1 Protein Homology CDS 1280333 1281610 . - 0 ID=cds-WP_000982959.1;Parent=gene-CCO40_RS06070;Dbxref=GenBank:WP_000982959.1;Name=WP_000982959.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461488.1;locus_tag=CCO40_RS06070;product=stationary phase inducible protein CsiE;protein_id=WP_000982959.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1281736 1282374 . + . ID=gene-CCO40_RS06075;Name=CCO40_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06075;old_locus_tag=CCO40_06075 NZ_CP075116.1 Protein Homology CDS 1281736 1282374 . + 0 ID=cds-WP_045717730.1;Parent=gene-CCO40_RS06075;Dbxref=GenBank:WP_045717730.1;Name=WP_045717730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461487.1;locus_tag=CCO40_RS06075;product=DUF1007 family protein;protein_id=WP_045717730.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1282365 1283351 . + . ID=gene-CCO40_RS06080;Name=CCO40_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06080;old_locus_tag=CCO40_06080 NZ_CP075116.1 Protein Homology CDS 1282365 1283351 . + 0 ID=cds-WP_045717731.1;Parent=gene-CCO40_RS06080;Dbxref=GenBank:WP_045717731.1;Name=WP_045717731.1;Ontology_term=GO:0035444,GO:0015099,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=nickel cation transmembrane transport|0035444||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=CCO40_RS06080;product=nickel/cobalt transporter;protein_id=WP_045717731.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1283352 1284365 . - . ID=gene-CCO40_RS06085;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=CCO40_RS06085;old_locus_tag=CCO40_06085 NZ_CP075116.1 Protein Homology CDS 1283352 1284365 . - 0 ID=cds-WP_000020685.1;Parent=gene-CCO40_RS06085;Dbxref=GenBank:WP_000020685.1;Name=WP_000020685.1;Ontology_term=GO:0006790;gbkey=CDS;gene=asrC;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461485.1;locus_tag=CCO40_RS06085;product=sulfite reductase subunit C;protein_id=WP_000020685.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1284376 1285194 . - . ID=gene-CCO40_RS06090;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=CCO40_RS06090;old_locus_tag=CCO40_06090 NZ_CP075116.1 Protein Homology CDS 1284376 1285194 . - 0 ID=cds-WP_000017587.1;Parent=gene-CCO40_RS06090;Dbxref=GenBank:WP_000017587.1;Name=WP_000017587.1;Ontology_term=GO:0006790,GO:0009055,GO:0016667;gbkey=CDS;gene=asrB;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461484.1;locus_tag=CCO40_RS06090;product=anaerobic sulfite reductase subunit AsrB;protein_id=WP_000017587.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1285198 1286241 . - . ID=gene-CCO40_RS06095;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=protein_coding;locus_tag=CCO40_RS06095;old_locus_tag=CCO40_06095 NZ_CP075116.1 Protein Homology CDS 1285198 1286241 . - 0 ID=cds-WP_000985219.1;Parent=gene-CCO40_RS06095;Dbxref=GenBank:WP_000985219.1;Name=WP_000985219.1;Ontology_term=GO:0006790,GO:0009055,GO:0016667;gbkey=CDS;gene=asrA;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461483.1;locus_tag=CCO40_RS06095;product=anaerobic sulfite reductase subunit AsrA;protein_id=WP_000985219.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1286423 1287301 . - . ID=gene-CCO40_RS06100;Name=CCO40_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06100;old_locus_tag=CCO40_06100 NZ_CP075116.1 Protein Homology CDS 1286423 1287301 . - 0 ID=cds-WP_000174939.1;Parent=gene-CCO40_RS06100;Dbxref=GenBank:WP_000174939.1;Name=WP_000174939.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461482.1;locus_tag=CCO40_RS06100;product=alpha/beta hydrolase;protein_id=WP_000174939.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1287446 1288249 . - . ID=gene-CCO40_RS06105;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=CCO40_RS06105;old_locus_tag=CCO40_06105 NZ_CP075116.1 Protein Homology CDS 1287446 1288249 . - 0 ID=cds-WP_000553467.1;Parent=gene-CCO40_RS06105;Dbxref=GenBank:WP_000553467.1;Name=WP_000553467.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=CCO40_RS06105;product=inositol-1-monophosphatase;protein_id=WP_000553467.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1288368 1289099 . + . ID=gene-CCO40_RS06110;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=CCO40_RS06110;old_locus_tag=CCO40_06110 NZ_CP075116.1 Protein Homology CDS 1288368 1289099 . + 0 ID=cds-WP_000940032.1;Parent=gene-CCO40_RS06110;Dbxref=GenBank:WP_000940032.1;Name=WP_000940032.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461480.1;locus_tag=CCO40_RS06110;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_000940032.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1289259 1289753 . + . ID=gene-CCO40_RS06115;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=CCO40_RS06115;old_locus_tag=CCO40_06115 NZ_CP075116.1 Protein Homology CDS 1289259 1289753 . + 0 ID=cds-WP_001241346.1;Parent=gene-CCO40_RS06115;Dbxref=GenBank:WP_001241346.1;Name=WP_001241346.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=CCO40_RS06115;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241346.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1289934 1291148 . + . ID=gene-CCO40_RS06120;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=CCO40_RS06120;old_locus_tag=CCO40_06120 NZ_CP075116.1 Protein Homology CDS 1289934 1291148 . + 0 ID=cds-WP_000775263.1;Parent=gene-CCO40_RS06120;Dbxref=GenBank:WP_000775263.1;Name=WP_000775263.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=CCO40_RS06120;product=cysteine desulfurase;protein_id=WP_000775263.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1291176 1291562 . + . ID=gene-CCO40_RS06125;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=CCO40_RS06125;old_locus_tag=CCO40_06125 NZ_CP075116.1 Protein Homology CDS 1291176 1291562 . + 0 ID=cds-WP_000331704.1;Parent=gene-CCO40_RS06125;Dbxref=GenBank:WP_000331704.1;Name=WP_000331704.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=CCO40_RS06125;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331704.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1291591 1291914 . + . ID=gene-CCO40_RS06130;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=CCO40_RS06130;old_locus_tag=CCO40_06130 NZ_CP075116.1 Protein Homology CDS 1291591 1291914 . + 0 ID=cds-WP_000028952.1;Parent=gene-CCO40_RS06130;Dbxref=GenBank:WP_000028952.1;Name=WP_000028952.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461476.1;locus_tag=CCO40_RS06130;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028952.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1292110 1292625 . + . ID=gene-CCO40_RS06135;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=CCO40_RS06135;old_locus_tag=CCO40_06135 NZ_CP075116.1 Protein Homology CDS 1292110 1292625 . + 0 ID=cds-WP_000384395.1;Parent=gene-CCO40_RS06135;Dbxref=GenBank:WP_000384395.1;Name=WP_000384395.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461475.1;locus_tag=CCO40_RS06135;product=co-chaperone HscB;protein_id=WP_000384395.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1292638 1294488 . + . ID=gene-CCO40_RS06140;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=CCO40_RS06140;old_locus_tag=CCO40_06140 NZ_CP075116.1 Protein Homology CDS 1292638 1294488 . + 0 ID=cds-WP_001196652.1;Parent=gene-CCO40_RS06140;Dbxref=GenBank:WP_001196652.1;Name=WP_001196652.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=CCO40_RS06140;product=Fe-S protein assembly chaperone HscA;protein_id=WP_001196652.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1294490 1294825 . + . ID=gene-CCO40_RS06145;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=CCO40_RS06145;old_locus_tag=CCO40_06145 NZ_CP075116.1 Protein Homology CDS 1294490 1294825 . + 0 ID=cds-WP_001124466.1;Parent=gene-CCO40_RS06145;Dbxref=GenBank:WP_001124466.1;Name=WP_001124466.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=CCO40_RS06145;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124466.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1294837 1295037 . + . ID=gene-CCO40_RS06150;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=CCO40_RS06150;old_locus_tag=CCO40_06150 NZ_CP075116.1 Protein Homology CDS 1294837 1295037 . + 0 ID=cds-WP_000523621.1;Parent=gene-CCO40_RS06150;Dbxref=GenBank:WP_000523621.1;Name=WP_000523621.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=CCO40_RS06150;product=Fe-S cluster assembly protein IscX;protein_id=WP_000523621.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1295284 1296567 . + . ID=gene-CCO40_RS06155;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=CCO40_RS06155;old_locus_tag=CCO40_06155 NZ_CP075116.1 Protein Homology CDS 1295284 1296567 . + 0 ID=cds-WP_000133544.1;Parent=gene-CCO40_RS06155;Dbxref=GenBank:WP_000133544.1;Name=WP_000133544.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461471.1;locus_tag=CCO40_RS06155;product=aminopeptidase PepB;protein_id=WP_000133544.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1296677 1297462 . + . ID=gene-CCO40_RS06160;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=CCO40_RS06160;old_locus_tag=CCO40_06160 NZ_CP075116.1 Protein Homology CDS 1296677 1297462 . + 0 ID=cds-WP_023170944.1;Parent=gene-CCO40_RS06160;Dbxref=GenBank:WP_023170944.1;Name=WP_023170944.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=CCO40_RS06160;product=enhanced serine sensitivity protein SseB;protein_id=WP_023170944.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1297499 1297615 . - . ID=gene-CCO40_RS22430;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=CCO40_RS22430 NZ_CP075116.1 Protein Homology CDS 1297499 1297615 . - 0 ID=cds-WP_242617172.1;Parent=gene-CCO40_RS22430;Dbxref=GenBank:WP_242617172.1;Name=WP_242617172.1;gbkey=CDS;gene=timP;inference=COORDINATES: protein motif:HMM:NF057826.1;locus_tag=CCO40_RS22430;product=small toxic inner membrane protein TimP;protein_id=WP_242617172.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1298031 1298699 . - . ID=gene-CCO40_RS06165;Name=CCO40_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06165;old_locus_tag=CCO40_06165 NZ_CP075116.1 Protein Homology CDS 1298031 1298699 . - 0 ID=cds-WP_000355303.1;Parent=gene-CCO40_RS06165;Dbxref=GenBank:WP_000355303.1;Name=WP_000355303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461469.1;locus_tag=CCO40_RS06165;product=DUF5066 family protein;protein_id=WP_000355303.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1298742 1298966 . + . ID=gene-CCO40_RS06170;Name=CCO40_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06170;old_locus_tag=CCO40_06170 NZ_CP075116.1 Protein Homology CDS 1298742 1298966 . + 0 ID=cds-WP_024132232.1;Parent=gene-CCO40_RS06170;Dbxref=GenBank:WP_024132232.1;Name=WP_024132232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344128.1;locus_tag=CCO40_RS06170;product=hypothetical protein;protein_id=WP_024132232.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1298946 1299788 . - . ID=gene-CCO40_RS06175;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=CCO40_RS06175;old_locus_tag=CCO40_06175 NZ_CP075116.1 Protein Homology CDS 1298946 1299788 . - 0 ID=cds-WP_000205251.1;Parent=gene-CCO40_RS06175;Dbxref=GenBank:WP_000205251.1;Name=WP_000205251.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461468.1;locus_tag=CCO40_RS06175;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_000205251.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1299997 1304931 . + . ID=gene-CCO40_RS06180;Name=CCO40_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06180;old_locus_tag=CCO40_06180 NZ_CP075116.1 Protein Homology CDS 1299997 1304931 . + 0 ID=cds-WP_094889332.1;Parent=gene-CCO40_RS06180;Dbxref=GenBank:WP_094889332.1;Name=WP_094889332.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=CCO40_RS06180;product=alpha-2-macroglobulin family protein;protein_id=WP_094889332.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1304932 1307247 . + . ID=gene-CCO40_RS06185;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=CCO40_RS06185;old_locus_tag=CCO40_06185 NZ_CP075116.1 Protein Homology CDS 1304932 1307247 . + 0 ID=cds-WP_023200122.1;Parent=gene-CCO40_RS06185;Dbxref=GenBank:WP_023200122.1;Name=WP_023200122.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=CCO40_RS06185;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_023200122.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1307403 1309781 . + . ID=gene-CCO40_RS06190;Name=CCO40_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06190;old_locus_tag=CCO40_06190 NZ_CP075116.1 Protein Homology CDS 1307403 1309781 . + 0 ID=cds-WP_058116544.1;Parent=gene-CCO40_RS06190;Dbxref=GenBank:WP_058116544.1;Name=WP_058116544.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664463.1;locus_tag=CCO40_RS06190;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_058116544.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1309778 1310407 . + . ID=gene-CCO40_RS06195;Name=CCO40_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06195;old_locus_tag=CCO40_06195 NZ_CP075116.1 Protein Homology CDS 1309778 1310407 . + 0 ID=cds-WP_000077436.1;Parent=gene-CCO40_RS06195;Dbxref=GenBank:WP_000077436.1;Name=WP_000077436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461464.1;locus_tag=CCO40_RS06195;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_000077436.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1310400 1311209 . + . ID=gene-CCO40_RS06200;Name=CCO40_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06200;old_locus_tag=CCO40_06200 NZ_CP075116.1 Protein Homology CDS 1310400 1311209 . + 0 ID=cds-WP_094889333.1;Parent=gene-CCO40_RS06200;Dbxref=GenBank:WP_094889333.1;Name=WP_094889333.1;Ontology_term=GO:0019645,GO:0009389,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461463.2;locus_tag=CCO40_RS06200;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_094889333.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1311209 1312072 . + . ID=gene-CCO40_RS06205;Name=CCO40_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06205;old_locus_tag=CCO40_06205 NZ_CP075116.1 Protein Homology CDS 1311209 1312072 . + 0 ID=cds-WP_094889334.1;Parent=gene-CCO40_RS06205;Dbxref=GenBank:WP_094889334.1;Name=WP_094889334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461462.1;locus_tag=CCO40_RS06205;product=4Fe-4S binding protein;protein_id=WP_094889334.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1312193 1312624 . + . ID=gene-CCO40_RS06210;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=CCO40_RS06210;old_locus_tag=CCO40_06210 NZ_CP075116.1 Protein Homology CDS 1312193 1312624 . + 0 ID=cds-WP_000963846.1;Parent=gene-CCO40_RS06210;Dbxref=GenBank:WP_000963846.1;Name=WP_000963846.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=CCO40_RS06210;product=nucleoside-diphosphate kinase;protein_id=WP_000963846.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1312831 1313997 . + . ID=gene-CCO40_RS06215;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;gene_synonym=trmG;locus_tag=CCO40_RS06215;old_locus_tag=CCO40_06215 NZ_CP075116.1 Protein Homology CDS 1312831 1313997 . + 0 ID=cds-WP_000003206.1;Parent=gene-CCO40_RS06215;Dbxref=GenBank:WP_000003206.1;Name=WP_000003206.1;gbkey=CDS;gene=rlmN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461460.1;locus_tag=CCO40_RS06215;product=dual-specificity RNA methyltransferase RlmN;protein_id=WP_000003206.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1314289 1315293 . + . ID=gene-CCO40_RS06220;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=CCO40_RS06220;old_locus_tag=CCO40_06220 NZ_CP075116.1 Protein Homology CDS 1314289 1315293 . + 0 ID=cds-WP_094889335.1;Parent=gene-CCO40_RS06220;Dbxref=GenBank:WP_094889335.1;Name=WP_094889335.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461459.1;locus_tag=CCO40_RS06220;product=cytoskeleton protein RodZ;protein_id=WP_094889335.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1315320 1316438 . + . ID=gene-CCO40_RS06225;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=CCO40_RS06225;old_locus_tag=CCO40_06225 NZ_CP075116.1 Protein Homology CDS 1315320 1316438 . + 0 ID=cds-WP_000551815.1;Parent=gene-CCO40_RS06225;Dbxref=GenBank:WP_000551815.1;Name=WP_000551815.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461458.1;locus_tag=CCO40_RS06225;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551815.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1316549 1317823 . + . ID=gene-CCO40_RS06230;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=CCO40_RS06230;old_locus_tag=CCO40_06230 NZ_CP075116.1 Protein Homology CDS 1316549 1317823 . + 0 ID=cds-WP_001107139.1;Parent=gene-CCO40_RS06230;Dbxref=GenBank:WP_001107139.1;Name=WP_001107139.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461457.1;locus_tag=CCO40_RS06230;product=histidine--tRNA ligase;protein_id=WP_001107139.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1317837 1318457 . + . ID=gene-CCO40_RS06235;Name=CCO40_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06235;old_locus_tag=CCO40_06235 NZ_CP075116.1 Protein Homology CDS 1317837 1318457 . + 0 ID=cds-WP_000409190.1;Parent=gene-CCO40_RS06235;Dbxref=GenBank:WP_000409190.1;Name=WP_000409190.1;Ontology_term=GO:0005515,GO:0044877;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-containing complex binding|0044877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461456.1;locus_tag=CCO40_RS06235;product=YfgM family protein;protein_id=WP_000409190.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1318468 1319646 . + . ID=gene-CCO40_RS06240;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=CCO40_RS06240;old_locus_tag=CCO40_06240 NZ_CP075116.1 Protein Homology CDS 1318468 1319646 . + 0 ID=cds-WP_001177072.1;Parent=gene-CCO40_RS06240;Dbxref=GenBank:WP_001177072.1;Name=WP_001177072.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461455.1;locus_tag=CCO40_RS06240;product=outer membrane protein assembly factor BamB;protein_id=WP_001177072.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1319763 1321235 . + . ID=gene-CCO40_RS06245;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=CCO40_RS06245;old_locus_tag=CCO40_06245 NZ_CP075116.1 Protein Homology CDS 1319763 1321235 . + 0 ID=cds-WP_000249411.1;Parent=gene-CCO40_RS06245;Dbxref=GenBank:WP_000249411.1;Name=WP_000249411.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=CCO40_RS06245;product=ribosome biogenesis GTPase Der;protein_id=WP_000249411.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1321324 1321545 . + . ID=gene-CCO40_RS06250;Name=CCO40_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06250;old_locus_tag=CCO40_06250 NZ_CP075116.1 Protein Homology CDS 1321324 1321545 . + 0 ID=cds-WP_000406465.1;Parent=gene-CCO40_RS06250;Dbxref=GenBank:WP_000406465.1;Name=WP_000406465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461453.1;locus_tag=CCO40_RS06250;product=zinc ribbon domain-containing protein;protein_id=WP_000406465.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1321891 1324083 . + . ID=gene-CCO40_RS06255;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=protein_coding;locus_tag=CCO40_RS06255;old_locus_tag=CCO40_06255 NZ_CP075116.1 Protein Homology CDS 1321891 1324083 . + 0 ID=cds-WP_094889336.1;Parent=gene-CCO40_RS06255;Dbxref=GenBank:WP_094889336.1;Name=WP_094889336.1;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=CCO40_RS06255;product=intimin-like inverse autotransporter SinH;protein_id=WP_094889336.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1324141 1325112 . + . ID=gene-CCO40_RS06260;Name=CCO40_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06260;old_locus_tag=CCO40_06260 NZ_CP075116.1 Protein Homology CDS 1324141 1325112 . + 0 ID=cds-WP_064012805.1;Parent=gene-CCO40_RS06260;Dbxref=GenBank:WP_064012805.1;Name=WP_064012805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461451.1;locus_tag=CCO40_RS06260;product=SinI family autotransporter-associated protein;protein_id=WP_064012805.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1325232 1330838 . + . ID=gene-CCO40_RS06265;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=CCO40_RS06265;old_locus_tag=CCO40_06265 NZ_CP075116.1 Protein Homology CDS 1325232 1330838 . + 0 ID=cds-WP_094889337.1;Parent=gene-CCO40_RS06265;Dbxref=GenBank:WP_094889337.1;Name=WP_094889337.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461450.1;locus_tag=CCO40_RS06265;product=DUF823/DUF824 repeat adhesin RatA;protein_id=WP_094889337.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1330997 1331215 . + . ID=gene-CCO40_RS06270;Name=CCO40_RS06270;end_range=1331215,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS06270;old_locus_tag=CCO40_06270;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 1330997 1331215 . + 0 ID=cds-CCO40_RS06270;Parent=gene-CCO40_RS06270;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1331215,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=CCO40_RS06270;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 1331881 1338030 . + . ID=gene-CCO40_RS06275;Name=shdA;gbkey=Gene;gene=shdA;gene_biotype=protein_coding;locus_tag=CCO40_RS06275;old_locus_tag=CCO40_06275 NZ_CP075116.1 Protein Homology CDS 1331881 1338030 . + 0 ID=cds-WP_220569205.1;Parent=gene-CCO40_RS06275;Dbxref=GenBank:WP_220569205.1;Name=WP_220569205.1;Ontology_term=GO:0019867;gbkey=CDS;gene=shdA;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835909.1;locus_tag=CCO40_RS06275;product=fibronectin-binding autotransporter adhesin ShdA;protein_id=WP_220569205.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1338194 1339543 . - . ID=gene-CCO40_RS06280;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=CCO40_RS06280;old_locus_tag=CCO40_06280 NZ_CP075116.1 Protein Homology CDS 1338194 1339543 . - 0 ID=cds-WP_094889237.1;Parent=gene-CCO40_RS06280;Dbxref=GenBank:WP_094889237.1;Name=WP_094889237.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461447.1;locus_tag=CCO40_RS06280;product=exodeoxyribonuclease VII large subunit;protein_id=WP_094889237.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1339704 1341170 . + . ID=gene-CCO40_RS06285;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=CCO40_RS06285;old_locus_tag=CCO40_06285 NZ_CP075116.1 Protein Homology CDS 1339704 1341170 . + 0 ID=cds-WP_000944174.1;Parent=gene-CCO40_RS06285;Dbxref=GenBank:WP_000944174.1;Name=WP_000944174.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=CCO40_RS06285;product=IMP dehydrogenase;protein_id=WP_000944174.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1341240 1342817 . + . ID=gene-CCO40_RS06290;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=CCO40_RS06290;old_locus_tag=CCO40_06290 NZ_CP075116.1 Protein Homology CDS 1341240 1342817 . + 0 ID=cds-WP_000138293.1;Parent=gene-CCO40_RS06290;Dbxref=GenBank:WP_000138293.1;Name=WP_000138293.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=CCO40_RS06290;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138293.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1342953 1343270 . + . ID=gene-CCO40_RS06295;Name=CCO40_RS06295;end_range=1343270,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS06295;old_locus_tag=CCO40_06295;partial=true;pseudo=true;start_range=.,1342953 NZ_CP075116.1 Protein Homology CDS 1342953 1343270 . + 0 ID=cds-CCO40_RS06295;Parent=gene-CCO40_RS06295;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=1343270,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=CCO40_RS06295;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,1342953;transl_table=11 NZ_CP075116.1 RefSeq gene 1343350 1343679 . - . ID=gene-CCO40_RS06300;Name=CCO40_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06300;old_locus_tag=CCO40_06300 NZ_CP075116.1 Protein Homology CDS 1343350 1343679 . - 0 ID=cds-WP_023228776.1;Parent=gene-CCO40_RS06300;Dbxref=GenBank:WP_023228776.1;Name=WP_023228776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461443.1;locus_tag=CCO40_RS06300;product=DUF1493 family protein;protein_id=WP_023228776.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1343664 1343885 . - . ID=gene-CCO40_RS22655;Name=CCO40_RS22655;end_range=1343885,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22655;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 1343664 1343885 . - 0 ID=cds-CCO40_RS22655;Parent=gene-CCO40_RS22655;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1343885,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_125368327.1;locus_tag=CCO40_RS22655;partial=true;product=STM2901 family protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1344152 1344295 . + . ID=gene-CCO40_RS22435;Name=CCO40_RS22435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22435;partial=true;pseudo=true;start_range=.,1344152 NZ_CP075116.1 Protein Homology CDS 1344152 1344295 . + 0 ID=cds-CCO40_RS22435;Parent=gene-CCO40_RS22435;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448901.1;locus_tag=CCO40_RS22435;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1344152;transl_table=11 NZ_CP075116.1 RefSeq gene 1344374 1344565 . - . ID=gene-CCO40_RS06310;Name=CCO40_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06310;old_locus_tag=CCO40_06310 NZ_CP075116.1 Protein Homology CDS 1344374 1344565 . - 0 ID=cds-WP_000075924.1;Parent=gene-CCO40_RS06310;Dbxref=GenBank:WP_000075924.1;Name=WP_000075924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461441.1;locus_tag=CCO40_RS06310;product=YfgG family protein;protein_id=WP_000075924.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1344744 1344881 . + . ID=gene-CCO40_RS06315;Name=CCO40_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06315;old_locus_tag=CCO40_06315 NZ_CP075116.1 Protein Homology CDS 1344744 1344881 . + 0 ID=cds-WP_001540598.1;Parent=gene-CCO40_RS06315;Dbxref=GenBank:WP_001540598.1;Name=WP_001540598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448898.1;locus_tag=CCO40_RS06315;product=hypothetical protein;protein_id=WP_001540598.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1344978 1347191 . + . ID=gene-CCO40_RS06320;Name=CCO40_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06320;old_locus_tag=CCO40_06320 NZ_CP075116.1 Protein Homology CDS 1344978 1347191 . + 0 ID=cds-WP_094889238.1;Parent=gene-CCO40_RS06320;Dbxref=GenBank:WP_094889238.1;Name=WP_094889238.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=CCO40_RS06320;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_094889238.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1347227 1348768 . - . ID=gene-CCO40_RS06325;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=CCO40_RS06325;old_locus_tag=CCO40_06325 NZ_CP075116.1 Protein Homology CDS 1347227 1348768 . - 0 ID=cds-WP_094889239.1;Parent=gene-CCO40_RS06325;Dbxref=GenBank:WP_094889239.1;Name=WP_094889239.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461437.1;locus_tag=CCO40_RS06325;product=exopolyphosphatase;protein_id=WP_094889239.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1348773 1350839 . - . ID=gene-CCO40_RS06330;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=CCO40_RS06330;old_locus_tag=CCO40_06330 NZ_CP075116.1 Protein Homology CDS 1348773 1350839 . - 0 ID=cds-WP_000529555.1;Parent=gene-CCO40_RS06330;Dbxref=GenBank:WP_000529555.1;Name=WP_000529555.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=CCO40_RS06330;product=polyphosphate kinase 1;protein_id=WP_000529555.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1351028 1351666 . - . ID=gene-CCO40_RS06335;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=CCO40_RS06335;old_locus_tag=CCO40_06335 NZ_CP075116.1 Protein Homology CDS 1351028 1351666 . - 0 ID=cds-WP_001028589.1;Parent=gene-CCO40_RS06335;Dbxref=GenBank:WP_001028589.1;Name=WP_001028589.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461435.1;locus_tag=CCO40_RS06335;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001028589.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1351666 1352703 . - . ID=gene-CCO40_RS06340;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=CCO40_RS06340;old_locus_tag=CCO40_06340 NZ_CP075116.1 Protein Homology CDS 1351666 1352703 . - 0 ID=cds-WP_094889250.1;Parent=gene-CCO40_RS06340;Dbxref=GenBank:WP_094889250.1;Name=WP_094889250.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=CCO40_RS06340;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_094889250.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1353117 1353743 . + . ID=gene-CCO40_RS06345;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=CCO40_RS06345;old_locus_tag=CCO40_06345 NZ_CP075116.1 Protein Homology CDS 1353117 1353743 . + 0 ID=cds-WP_000706208.1;Parent=gene-CCO40_RS06345;Dbxref=GenBank:WP_000706208.1;Name=WP_000706208.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=CCO40_RS06345;product=uracil phosphoribosyltransferase;protein_id=WP_000706208.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1353831 1355120 . + . ID=gene-CCO40_RS06350;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=CCO40_RS06350;old_locus_tag=CCO40_06350 NZ_CP075116.1 Protein Homology CDS 1353831 1355120 . + 0 ID=cds-WP_000198337.1;Parent=gene-CCO40_RS06350;Dbxref=GenBank:WP_000198337.1;Name=WP_000198337.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461432.1;locus_tag=CCO40_RS06350;product=uracil permease;protein_id=WP_000198337.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1355215 1355916 . + . ID=gene-CCO40_RS06355;Name=CCO40_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06355;old_locus_tag=CCO40_06355 NZ_CP075116.1 Protein Homology CDS 1355215 1355916 . + 0 ID=cds-WP_061835882.1;Parent=gene-CCO40_RS06355;Dbxref=GenBank:WP_061835882.1;Name=WP_061835882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=CCO40_RS06355;product=DnaA inactivator Hda;protein_id=WP_061835882.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1355943 1356302 . - . ID=gene-CCO40_RS06360;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=CCO40_RS06360;old_locus_tag=CCO40_06360 NZ_CP075116.1 Protein Homology CDS 1355943 1356302 . - 0 ID=cds-WP_000132650.1;Parent=gene-CCO40_RS06360;Dbxref=GenBank:WP_000132650.1;Name=WP_000132650.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461430.1;locus_tag=CCO40_RS06360;product=arsenate reductase (glutaredoxin);protein_id=WP_000132650.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1356342 1357805 . - . ID=gene-CCO40_RS06365;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=CCO40_RS06365;old_locus_tag=CCO40_06365 NZ_CP075116.1 Protein Homology CDS 1356342 1357805 . - 0 ID=cds-WP_094889240.1;Parent=gene-CCO40_RS06365;Dbxref=GenBank:WP_094889240.1;Name=WP_094889240.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461429.1;locus_tag=CCO40_RS06365;product=beta-barrel assembly-enhancing protease;protein_id=WP_094889240.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1358013 1359080 . + . ID=gene-CCO40_RS06370;Name=CCO40_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06370;old_locus_tag=CCO40_06370 NZ_CP075116.1 Protein Homology CDS 1358013 1359080 . + 0 ID=cds-WP_000892057.1;Parent=gene-CCO40_RS06370;Dbxref=GenBank:WP_000892057.1;Name=WP_000892057.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461428.1;locus_tag=CCO40_RS06370;product=AI-2E family transporter;protein_id=WP_000892057.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1359297 1359617 . + . ID=gene-CCO40_RS06375;Name=CCO40_RS06375;end_range=1359617,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS06375;old_locus_tag=CCO40_06375;partial=true;pseudo=true;start_range=.,1359297 NZ_CP075116.1 Protein Homology CDS 1359297 1359617 . + 0 ID=cds-CCO40_RS06375;Parent=gene-CCO40_RS06375;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0008152,GO:0008887;end_range=1359617,.;gbkey=CDS;go_function=glycerate kinase activity|0008887||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706371.1;locus_tag=CCO40_RS06375;partial=true;product=glycerate kinase;pseudo=true;start_range=.,1359297;transl_table=11 NZ_CP075116.1 RefSeq gene 1359667 1360137 . - . ID=gene-CCO40_RS06380;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=CCO40_RS06380;old_locus_tag=CCO40_06380 NZ_CP075116.1 Protein Homology CDS 1359667 1360137 . - 0 ID=cds-WP_001068686.1;Parent=gene-CCO40_RS06380;Dbxref=GenBank:WP_001068686.1;Name=WP_001068686.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461426.1;locus_tag=CCO40_RS06380;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068686.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1360137 1360709 . - . ID=gene-CCO40_RS06385;Name=CCO40_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06385;old_locus_tag=CCO40_06385 NZ_CP075116.1 Protein Homology CDS 1360137 1360709 . - 0 ID=cds-WP_000189061.1;Parent=gene-CCO40_RS06385;Dbxref=GenBank:WP_000189061.1;Name=WP_000189061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=CCO40_RS06385;product=glycine cleavage system transcriptional repressor;protein_id=WP_000189061.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1360855 1361733 . + . ID=gene-CCO40_RS06390;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=CCO40_RS06390;old_locus_tag=CCO40_06390 NZ_CP075116.1 Protein Homology CDS 1360855 1361733 . + 0 ID=cds-WP_000494020.1;Parent=gene-CCO40_RS06390;Dbxref=GenBank:WP_000494020.1;Name=WP_000494020.1;Ontology_term=GO:0009085,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=CCO40_RS06390;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_000494020.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1361750 1362784 . + . ID=gene-CCO40_RS06395;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=CCO40_RS06395;old_locus_tag=CCO40_06395 NZ_CP075116.1 Protein Homology CDS 1361750 1362784 . + 0 ID=cds-WP_000331877.1;Parent=gene-CCO40_RS06395;Dbxref=GenBank:WP_000331877.1;Name=WP_000331877.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461423.1;locus_tag=CCO40_RS06395;product=outer membrane protein assembly factor BamC;protein_id=WP_000331877.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1362959 1363672 . + . ID=gene-CCO40_RS06400;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=CCO40_RS06400;old_locus_tag=CCO40_06400 NZ_CP075116.1 Protein Homology CDS 1362959 1363672 . + 0 ID=cds-WP_001171630.1;Parent=gene-CCO40_RS06400;Dbxref=GenBank:WP_001171630.1;Name=WP_001171630.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=CCO40_RS06400;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001171630.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1363803 1364666 . + . ID=gene-CCO40_RS06405;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=CCO40_RS06405;old_locus_tag=CCO40_06405 NZ_CP075116.1 Protein Homology CDS 1363803 1364666 . + 0 ID=cds-WP_094889241.1;Parent=gene-CCO40_RS06405;Dbxref=GenBank:WP_094889241.1;Name=WP_094889241.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461421.1;locus_tag=CCO40_RS06405;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_094889241.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1364682 1366700 . + . ID=gene-CCO40_RS06410;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=CCO40_RS06410;old_locus_tag=CCO40_06410 NZ_CP075116.1 Protein Homology CDS 1364682 1366700 . + 0 ID=cds-WP_094889242.1;Parent=gene-CCO40_RS06410;Dbxref=GenBank:WP_094889242.1;Name=WP_094889242.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461420.1;locus_tag=CCO40_RS06410;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_094889242.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1366727 1366927 . - . ID=gene-CCO40_RS06415;Name=CCO40_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06415;old_locus_tag=CCO40_06415 NZ_CP075116.1 Protein Homology CDS 1366727 1366927 . - 0 ID=cds-WP_000383839.1;Parent=gene-CCO40_RS06415;Dbxref=GenBank:WP_000383839.1;Name=WP_000383839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461419.1;locus_tag=CCO40_RS06415;product=YpfN family protein;protein_id=WP_000383839.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1366955 1368082 . - . ID=gene-CCO40_RS06420;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=CCO40_RS06420;old_locus_tag=CCO40_06420 NZ_CP075116.1 Protein Homology CDS 1366955 1368082 . - 0 ID=cds-WP_094889243.1;Parent=gene-CCO40_RS06420;Dbxref=GenBank:WP_094889243.1;Name=WP_094889243.1;Ontology_term=GO:0009085,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=CCO40_RS06420;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_094889243.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1368086 1368442 . - . ID=gene-CCO40_RS06425;Name=CCO40_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06425;old_locus_tag=CCO40_06425 NZ_CP075116.1 Protein Homology CDS 1368086 1368442 . - 0 ID=cds-WP_000631923.1;Parent=gene-CCO40_RS06425;Dbxref=GenBank:WP_000631923.1;Name=WP_000631923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461417.1;locus_tag=CCO40_RS06425;product=ArsC family reductase;protein_id=WP_000631923.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1368855 1368914 . + . ID=gene-CCO40_RS06430;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=CCO40_RS06430;old_locus_tag=CCO40_06430 NZ_CP075116.1 Protein Homology CDS 1368855 1368914 . + 0 ID=cds-WP_001386977.1;Parent=gene-CCO40_RS06430;Dbxref=GenBank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=CCO40_RS06430;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1369016 1372129 . - . ID=gene-CCO40_RS06435;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=CCO40_RS06435;old_locus_tag=CCO40_06435 NZ_CP075116.1 Protein Homology CDS 1369016 1372129 . - 0 ID=cds-WP_079840217.1;Parent=gene-CCO40_RS06435;Dbxref=GenBank:WP_079840217.1;Name=WP_079840217.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=CCO40_RS06435;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_079840217.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1372314 1374014 . - . ID=gene-CCO40_RS06440;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=CCO40_RS06440;old_locus_tag=CCO40_06440 NZ_CP075116.1 Protein Homology CDS 1372314 1374014 . - 0 ID=cds-WP_000216814.1;Parent=gene-CCO40_RS06440;Dbxref=GenBank:WP_000216814.1;Name=WP_000216814.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=CCO40_RS06440;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_000216814.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1374200 1376161 . + . ID=gene-CCO40_RS06445;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=CCO40_RS06445;old_locus_tag=CCO40_06445 NZ_CP075116.1 Protein Homology CDS 1374200 1376161 . + 0 ID=cds-WP_094889244.1;Parent=gene-CCO40_RS06445;Dbxref=GenBank:WP_094889244.1;Name=WP_094889244.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540591.1;locus_tag=CCO40_RS06445;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_094889244.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1376597 1377895 . - . ID=gene-CCO40_RS06450;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=CCO40_RS06450;old_locus_tag=CCO40_06450 NZ_CP075116.1 Protein Homology CDS 1376597 1377895 . - 0 ID=cds-WP_023993734.1;Parent=gene-CCO40_RS06450;Dbxref=GenBank:WP_023993734.1;Name=WP_023993734.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461413.1;locus_tag=CCO40_RS06450;product=penicillin binding protein PBP4B;protein_id=WP_023993734.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1378099 1378674 . + . ID=gene-CCO40_RS06455;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=CCO40_RS06455;old_locus_tag=CCO40_06455 NZ_CP075116.1 Protein Homology CDS 1378099 1378674 . + 0 ID=cds-WP_000084033.1;Parent=gene-CCO40_RS06455;Dbxref=GenBank:WP_000084033.1;Name=WP_000084033.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461412.1;locus_tag=CCO40_RS06455;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_000084033.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1378799 1379842 . + . ID=gene-CCO40_RS06460;Name=CCO40_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06460;old_locus_tag=CCO40_06460 NZ_CP075116.1 Protein Homology CDS 1378799 1379842 . + 0 ID=cds-WP_001270678.1;Parent=gene-CCO40_RS06460;Dbxref=GenBank:WP_001270678.1;Name=WP_001270678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461411.1;locus_tag=CCO40_RS06460;product=DUF1176 domain-containing protein;protein_id=WP_001270678.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1379970 1380200 . + . ID=gene-CCO40_RS06465;Name=CCO40_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06465;old_locus_tag=CCO40_06465 NZ_CP075116.1 Protein Homology CDS 1379970 1380200 . + 0 ID=cds-WP_000700634.1;Parent=gene-CCO40_RS06465;Dbxref=GenBank:WP_000700634.1;Name=WP_000700634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=CCO40_RS06465;product=hypothetical protein;protein_id=WP_000700634.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1380263 1382263 . - . ID=gene-CCO40_RS06470;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=CCO40_RS06470;old_locus_tag=CCO40_06470 NZ_CP075116.1 Protein Homology CDS 1380263 1382263 . - 0 ID=cds-WP_000087326.1;Parent=gene-CCO40_RS06470;Dbxref=GenBank:WP_000087326.1;Name=WP_000087326.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=CCO40_RS06470;product=transketolase;protein_id=WP_000087326.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1382283 1383233 . - . ID=gene-CCO40_RS06475;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=CCO40_RS06475;old_locus_tag=CCO40_06475 NZ_CP075116.1 Protein Homology CDS 1382283 1383233 . - 0 ID=cds-WP_001072435.1;Parent=gene-CCO40_RS06475;Dbxref=GenBank:WP_001072435.1;Name=WP_001072435.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461408.1;locus_tag=CCO40_RS06475;product=transaldolase;protein_id=WP_001072435.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1383505 1385784 . + . ID=gene-CCO40_RS06480;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=CCO40_RS06480;old_locus_tag=CCO40_06480 NZ_CP075116.1 Protein Homology CDS 1383505 1385784 . + 0 ID=cds-WP_000344299.1;Parent=gene-CCO40_RS06480;Dbxref=GenBank:WP_000344299.1;Name=WP_000344299.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461407.1;locus_tag=CCO40_RS06480;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_000344299.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1386201 1386536 . + . ID=gene-CCO40_RS06485;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=CCO40_RS06485;old_locus_tag=CCO40_06485 NZ_CP075116.1 Protein Homology CDS 1386201 1386536 . + 0 ID=cds-WP_001031445.1;Parent=gene-CCO40_RS06485;Dbxref=GenBank:WP_001031445.1;Name=WP_001031445.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=CCO40_RS06485;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_001031445.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1386549 1387028 . + . ID=gene-CCO40_RS06490;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=CCO40_RS06490;old_locus_tag=CCO40_06490 NZ_CP075116.1 Protein Homology CDS 1386549 1387028 . + 0 ID=cds-WP_000820751.1;Parent=gene-CCO40_RS06490;Dbxref=GenBank:WP_000820751.1;Name=WP_000820751.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461404.1;locus_tag=CCO40_RS06490;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_000820751.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1387006 1387695 . + . ID=gene-CCO40_RS06495;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=CCO40_RS06495;old_locus_tag=CCO40_06495 NZ_CP075116.1 Protein Homology CDS 1387006 1387695 . + 0 ID=cds-WP_000733867.1;Parent=gene-CCO40_RS06495;Dbxref=GenBank:WP_000733867.1;Name=WP_000733867.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=CCO40_RS06495;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_000733867.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1387692 1388495 . + . ID=gene-CCO40_RS06500;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=CCO40_RS06500;old_locus_tag=CCO40_06500 NZ_CP075116.1 Protein Homology CDS 1387692 1388495 . + 0 ID=cds-WP_000997656.1;Parent=gene-CCO40_RS06500;Dbxref=GenBank:WP_000997656.1;Name=WP_000997656.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461402.1;locus_tag=CCO40_RS06500;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_000997656.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1388492 1389508 . + . ID=gene-CCO40_RS06505;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CCO40_RS06505;old_locus_tag=CCO40_06505 NZ_CP075116.1 Protein Homology CDS 1388492 1389508 . + 0 ID=cds-WP_000582915.1;Parent=gene-CCO40_RS06505;Dbxref=GenBank:WP_000582915.1;Name=WP_000582915.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=CCO40_RS06505;product=phosphate acetyltransferase;protein_id=WP_000582915.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1389549 1389839 . + . ID=gene-CCO40_RS06510;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=CCO40_RS06510;old_locus_tag=CCO40_06510 NZ_CP075116.1 Protein Homology CDS 1389549 1389839 . + 0 ID=cds-WP_000387716.1;Parent=gene-CCO40_RS06510;Dbxref=GenBank:WP_000387716.1;Name=WP_000387716.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=CCO40_RS06510;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387716.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1389952 1390239 . + . ID=gene-CCO40_RS06515;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=CCO40_RS06515;old_locus_tag=CCO40_06515 NZ_CP075116.1 Protein Homology CDS 1389952 1390239 . + 0 ID=cds-WP_001522340.1;Parent=gene-CCO40_RS06515;Dbxref=GenBank:WP_001522340.1;Name=WP_001522340.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=CCO40_RS06515;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_001522340.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1390251 1391654 . + . ID=gene-CCO40_RS06520;Name=CCO40_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06520;old_locus_tag=CCO40_06520 NZ_CP075116.1 Protein Homology CDS 1390251 1391654 . + 0 ID=cds-WP_001075638.1;Parent=gene-CCO40_RS06520;Dbxref=GenBank:WP_001075638.1;Name=WP_001075638.1;Ontology_term=GO:0004029,GO:0008774;gbkey=CDS;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA,acetaldehyde dehydrogenase (acetylating%2C NAD+) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=CCO40_RS06520;product=aldehyde dehydrogenase family protein;protein_id=WP_001075638.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1391665 1392504 . + . ID=gene-CCO40_RS06525;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=CCO40_RS06525;old_locus_tag=CCO40_06525 NZ_CP075116.1 Protein Homology CDS 1391665 1392504 . + 0 ID=cds-WP_000929682.1;Parent=gene-CCO40_RS06525;Dbxref=GenBank:WP_000929682.1;Name=WP_000929682.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461397.1;locus_tag=CCO40_RS06525;product=ethanolamine utilization protein EutJ;protein_id=WP_000929682.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1392494 1393681 . + . ID=gene-CCO40_RS06530;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=CCO40_RS06530;old_locus_tag=CCO40_06530 NZ_CP075116.1 Protein Homology CDS 1392494 1393681 . + 0 ID=cds-WP_001147505.1;Parent=gene-CCO40_RS06530;Dbxref=GenBank:WP_001147505.1;Name=WP_001147505.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461396.1;locus_tag=CCO40_RS06530;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_001147505.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1393801 1395027 . + . ID=gene-CCO40_RS06535;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=CCO40_RS06535;old_locus_tag=CCO40_06535 NZ_CP075116.1 Protein Homology CDS 1393801 1395027 . + 0 ID=cds-WP_000512357.1;Parent=gene-CCO40_RS06535;Dbxref=GenBank:WP_000512357.1;Name=WP_000512357.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=CCO40_RS06535;product=ethanolamine utilization protein EutH;protein_id=WP_000512357.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1395024 1396427 . + . ID=gene-CCO40_RS06540;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=CCO40_RS06540;old_locus_tag=CCO40_06540 NZ_CP075116.1 Protein Homology CDS 1395024 1396427 . + 0 ID=cds-WP_001097509.1;Parent=gene-CCO40_RS06540;Dbxref=GenBank:WP_001097509.1;Name=WP_001097509.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=CCO40_RS06540;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_001097509.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1396439 1397800 . + . ID=gene-CCO40_RS06545;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=CCO40_RS06545;old_locus_tag=CCO40_06545 NZ_CP075116.1 Protein Homology CDS 1396439 1397800 . + 0 ID=cds-WP_000769981.1;Parent=gene-CCO40_RS06545;Dbxref=GenBank:WP_000769981.1;Name=WP_000769981.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461393.1;locus_tag=CCO40_RS06545;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_000769981.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1397819 1398715 . + . ID=gene-CCO40_RS06550;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=CCO40_RS06550;old_locus_tag=CCO40_06550 NZ_CP075116.1 Protein Homology CDS 1397819 1398715 . + 0 ID=cds-WP_080176762.1;Parent=gene-CCO40_RS06550;Dbxref=GenBank:WP_080176762.1;Name=WP_080176762.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461392.1;locus_tag=CCO40_RS06550;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_080176762.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1398725 1399384 . + . ID=gene-CCO40_RS06555;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=CCO40_RS06555;old_locus_tag=CCO40_06555 NZ_CP075116.1 Protein Homology CDS 1398725 1399384 . + 0 ID=cds-WP_001111056.1;Parent=gene-CCO40_RS06555;Dbxref=GenBank:WP_001111056.1;Name=WP_001111056.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=CCO40_RS06555;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_001111056.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1399397 1399891 . + . ID=gene-CCO40_RS06560;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=CCO40_RS06560;old_locus_tag=CCO40_06560 NZ_CP075116.1 Protein Homology CDS 1399397 1399891 . + 0 ID=cds-WP_000606266.1;Parent=gene-CCO40_RS06560;Dbxref=GenBank:WP_000606266.1;Name=WP_000606266.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=CCO40_RS06560;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_000606266.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1399939 1400991 . + . ID=gene-CCO40_RS06565;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=CCO40_RS06565;old_locus_tag=CCO40_06565 NZ_CP075116.1 Protein Homology CDS 1399939 1400991 . + 0 ID=cds-WP_000753666.1;Parent=gene-CCO40_RS06565;Dbxref=GenBank:WP_000753666.1;Name=WP_000753666.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461389.1;locus_tag=CCO40_RS06565;product=HTH-type transcriptional regulator EutR;protein_id=WP_000753666.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1401191 1401253 . - . ID=gene-CCO40_RS22660;Name=CCO40_RS22660;end_range=1401253,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22660;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 1401191 1401253 . - 0 ID=cds-CCO40_RS22660;Parent=gene-CCO40_RS22660;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1401253,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461388.1;locus_tag=CCO40_RS22660;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 1401253 1401924 . - . ID=gene-CCO40_RS06570;Name=CCO40_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06570;old_locus_tag=CCO40_06570 NZ_CP075116.1 Protein Homology CDS 1401253 1401924 . - 0 ID=cds-WP_000994058.1;Parent=gene-CCO40_RS06570;Dbxref=GenBank:WP_000994058.1;Name=WP_000994058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994057.1;locus_tag=CCO40_RS06570;product=hypothetical protein;protein_id=WP_000994058.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1401951 1402850 . - . ID=gene-CCO40_RS06575;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=CCO40_RS06575;old_locus_tag=CCO40_06575 NZ_CP075116.1 Protein Homology CDS 1401951 1402850 . - 0 ID=cds-WP_000801350.1;Parent=gene-CCO40_RS06575;Dbxref=GenBank:WP_000801350.1;Name=WP_000801350.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461386.1;locus_tag=CCO40_RS06575;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_000801350.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1402853 1403722 . - . ID=gene-CCO40_RS06580;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=CCO40_RS06580;old_locus_tag=CCO40_06580 NZ_CP075116.1 Protein Homology CDS 1402853 1403722 . - 0 ID=cds-WP_000102881.1;Parent=gene-CCO40_RS06580;Dbxref=GenBank:WP_000102881.1;Name=WP_000102881.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461385.1;locus_tag=CCO40_RS06580;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102881.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1403935 1404360 . + . ID=gene-CCO40_RS06585;Name=CCO40_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06585;old_locus_tag=CCO40_06585 NZ_CP075116.1 Protein Homology CDS 1403935 1404360 . + 0 ID=cds-WP_000406008.1;Parent=gene-CCO40_RS06585;Dbxref=GenBank:WP_000406008.1;Name=WP_000406008.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=CCO40_RS06585;product=GNAT family acetyltransferase;protein_id=WP_000406008.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1404347 1404796 . + . ID=gene-CCO40_RS06590;Name=CCO40_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06590;old_locus_tag=CCO40_06590 NZ_CP075116.1 Protein Homology CDS 1404347 1404796 . + 0 ID=cds-WP_000842940.1;Parent=gene-CCO40_RS06590;Dbxref=GenBank:WP_000842940.1;Name=WP_000842940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461383.1;locus_tag=CCO40_RS06590;product=DUF2919 domain-containing protein;protein_id=WP_000842940.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1404858 1405433 . + . ID=gene-CCO40_RS06595;Name=CCO40_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06595;old_locus_tag=CCO40_06595 NZ_CP075116.1 Protein Homology CDS 1404858 1405433 . + 0 ID=cds-WP_045718412.1;Parent=gene-CCO40_RS06595;Dbxref=GenBank:WP_045718412.1;Name=WP_045718412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461382.1;locus_tag=CCO40_RS06595;product=RpoE-regulated lipoprotein;protein_id=WP_045718412.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1405528 1406427 . + . ID=gene-CCO40_RS06600;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=CCO40_RS06600;old_locus_tag=CCO40_06600 NZ_CP075116.1 Protein Homology CDS 1405528 1406427 . + 0 ID=cds-WP_000084583.1;Parent=gene-CCO40_RS06600;Dbxref=GenBank:WP_000084583.1;Name=WP_000084583.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461381.1;locus_tag=CCO40_RS06600;product=porphyrinogen peroxidase;protein_id=WP_000084583.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1406665 1407456 . + . ID=gene-CCO40_RS06605;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=CCO40_RS06605;old_locus_tag=CCO40_06605 NZ_CP075116.1 Protein Homology CDS 1406665 1407456 . + 0 ID=cds-WP_000517460.1;Parent=gene-CCO40_RS06605;Dbxref=GenBank:WP_000517460.1;Name=WP_000517460.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461380.1;locus_tag=CCO40_RS06605;product=SDR family oxidoreductase UcpA;protein_id=WP_000517460.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1407614 1408630 . + . ID=gene-CCO40_RS06610;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=CCO40_RS06610;old_locus_tag=CCO40_06610 NZ_CP075116.1 Protein Homology CDS 1407614 1408630 . + 0 ID=cds-WP_045718413.1;Parent=gene-CCO40_RS06610;Dbxref=GenBank:WP_045718413.1;Name=WP_045718413.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461379.1;locus_tag=CCO40_RS06610;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_045718413.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1408630 1409463 . + . ID=gene-CCO40_RS06615;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=CCO40_RS06615;old_locus_tag=CCO40_06615 NZ_CP075116.1 Protein Homology CDS 1408630 1409463 . + 0 ID=cds-WP_000881746.1;Parent=gene-CCO40_RS06615;Dbxref=GenBank:WP_000881746.1;Name=WP_000881746.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=CCO40_RS06615;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_000881746.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1409463 1410338 . + . ID=gene-CCO40_RS06620;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=CCO40_RS06620;old_locus_tag=CCO40_06620 NZ_CP075116.1 Protein Homology CDS 1409463 1410338 . + 0 ID=cds-WP_000852706.1;Parent=gene-CCO40_RS06620;Dbxref=GenBank:WP_000852706.1;Name=WP_000852706.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461377.1;locus_tag=CCO40_RS06620;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000852706.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1410328 1411425 . + . ID=gene-CCO40_RS06625;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=CCO40_RS06625;old_locus_tag=CCO40_06625 NZ_CP075116.1 Protein Homology CDS 1410328 1411425 . + 0 ID=cds-WP_000021076.1;Parent=gene-CCO40_RS06625;Dbxref=GenBank:WP_000021076.1;Name=WP_000021076.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461376.1;locus_tag=CCO40_RS06625;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_000021076.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1411493 1412404 . + . ID=gene-CCO40_RS06630;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=CCO40_RS06630;old_locus_tag=CCO40_06630 NZ_CP075116.1 Protein Homology CDS 1411493 1412404 . + 0 ID=cds-WP_001093886.1;Parent=gene-CCO40_RS06630;Dbxref=GenBank:WP_001093886.1;Name=WP_001093886.1;Ontology_term=GO:0019344,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=CCO40_RS06630;product=cysteine synthase CysM;protein_id=WP_001093886.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1412656 1413264 . + . ID=gene-CCO40_RS06635;Name=CCO40_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06635;old_locus_tag=CCO40_06635 NZ_CP075116.1 Protein Homology CDS 1412656 1413264 . + 0 ID=cds-WP_000666525.1;Parent=gene-CCO40_RS06635;Dbxref=GenBank:WP_000666525.1;Name=WP_000666525.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000666526.1;locus_tag=CCO40_RS06635;product=tetratricopeptide repeat protein;protein_id=WP_000666525.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1413364 1413747 . - . ID=gene-CCO40_RS06640;Name=CCO40_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06640;old_locus_tag=CCO40_06640 NZ_CP075116.1 Protein Homology CDS 1413364 1413747 . - 0 ID=cds-WP_000710732.1;Parent=gene-CCO40_RS06640;Dbxref=GenBank:WP_000710732.1;Name=WP_000710732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000710732.1;locus_tag=CCO40_RS06640;product=YfeK family protein;protein_id=WP_000710732.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1413806 1414525 . - . ID=gene-CCO40_RS06645;Name=CCO40_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06645;old_locus_tag=CCO40_06645 NZ_CP075116.1 Protein Homology CDS 1413806 1414525 . - 0 ID=cds-WP_001263750.1;Parent=gene-CCO40_RS06645;Dbxref=GenBank:WP_001263750.1;Name=WP_001263750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461372.1;locus_tag=CCO40_RS06645;product=type 1 glutamine amidotransferase;protein_id=WP_001263750.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1414540 1415832 . - . ID=gene-CCO40_RS06650;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=CCO40_RS06650;old_locus_tag=CCO40_06650 NZ_CP075116.1 Protein Homology CDS 1414540 1415832 . - 0 ID=cds-WP_080170087.1;Parent=gene-CCO40_RS06650;Dbxref=GenBank:WP_080170087.1;Name=WP_080170087.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptsJ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461371.1;locus_tag=CCO40_RS06650;product=MocR-like B6 salvage transcription factor PtsJ;protein_id=WP_080170087.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1415915 1416781 . + . ID=gene-CCO40_RS06655;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=CCO40_RS06655;old_locus_tag=CCO40_06655 NZ_CP075116.1 Protein Homology CDS 1415915 1416781 . + 0 ID=cds-WP_000529613.1;Parent=gene-CCO40_RS06655;Dbxref=GenBank:WP_000529613.1;Name=WP_000529613.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=CCO40_RS06655;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_000529613.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1416778 1417017 . + . ID=gene-CCO40_RS06660;Name=CCO40_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06660;old_locus_tag=CCO40_06660 NZ_CP075116.1 Protein Homology CDS 1416778 1417017 . + 0 ID=cds-WP_000844541.1;Parent=gene-CCO40_RS06660;Dbxref=GenBank:WP_000844541.1;Name=WP_000844541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461369.1;locus_tag=CCO40_RS06660;product=hypothetical protein;protein_id=WP_000844541.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1417166 1417675 . - . ID=gene-CCO40_RS06665;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=CCO40_RS06665;old_locus_tag=CCO40_06665 NZ_CP075116.1 Protein Homology CDS 1417166 1417675 . - 0 ID=cds-WP_000522253.1;Parent=gene-CCO40_RS06665;Dbxref=GenBank:WP_000522253.1;Name=WP_000522253.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=CCO40_RS06665;product=PTS glucose transporter subunit IIA;protein_id=WP_000522253.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1417716 1419443 . - . ID=gene-CCO40_RS06670;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=CCO40_RS06670;old_locus_tag=CCO40_06670 NZ_CP075116.1 Protein Homology CDS 1417716 1419443 . - 0 ID=cds-WP_000623114.1;Parent=gene-CCO40_RS06670;Dbxref=GenBank:WP_000623114.1;Name=WP_000623114.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461367.1;locus_tag=CCO40_RS06670;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_000623114.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1419492 1419749 . - . ID=gene-CCO40_RS06675;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=CCO40_RS06675;old_locus_tag=CCO40_06675 NZ_CP075116.1 Protein Homology CDS 1419492 1419749 . - 0 ID=cds-WP_000487600.1;Parent=gene-CCO40_RS06675;Dbxref=GenBank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=CCO40_RS06675;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1420133 1421104 . - . ID=gene-CCO40_RS06680;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=CCO40_RS06680;old_locus_tag=CCO40_06680 NZ_CP075116.1 Protein Homology CDS 1420133 1421104 . - 0 ID=cds-WP_000036904.1;Parent=gene-CCO40_RS06680;Dbxref=GenBank:WP_000036904.1;Name=WP_000036904.1;Ontology_term=GO:0019344,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=CCO40_RS06680;product=cysteine synthase A;protein_id=WP_000036904.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1421268 1422029 . - . ID=gene-CCO40_RS06685;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=CCO40_RS06685;old_locus_tag=CCO40_06685 NZ_CP075116.1 Protein Homology CDS 1421268 1422029 . - 0 ID=cds-WP_000255008.1;Parent=gene-CCO40_RS06685;Dbxref=GenBank:WP_000255008.1;Name=WP_000255008.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461364.1;locus_tag=CCO40_RS06685;product=sulfate transporter CysZ;protein_id=WP_000255008.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1422261 1423247 . + . ID=gene-CCO40_RS06690;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=CCO40_RS06690;old_locus_tag=CCO40_06690 NZ_CP075116.1 Protein Homology CDS 1422261 1423247 . + 0 ID=cds-WP_000983126.1;Parent=gene-CCO40_RS06690;Dbxref=GenBank:WP_000983126.1;Name=WP_000983126.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461363.1;locus_tag=CCO40_RS06690;product=cell division protein ZipA;protein_id=WP_000983126.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1423319 1425334 . + . ID=gene-CCO40_RS06695;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=CCO40_RS06695;old_locus_tag=CCO40_06695 NZ_CP075116.1 Protein Homology CDS 1423319 1425334 . + 0 ID=cds-WP_023203835.1;Parent=gene-CCO40_RS06695;Dbxref=GenBank:WP_023203835.1;Name=WP_023203835.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461362.1;locus_tag=CCO40_RS06695;product=NAD-dependent DNA ligase LigA;protein_id=WP_023203835.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1425336 1425554 . + . ID=gene-CCO40_RS06700;Name=CCO40_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06700;old_locus_tag=CCO40_06700 NZ_CP075116.1 Protein Homology CDS 1425336 1425554 . + 0 ID=cds-WP_001519708.1;Parent=gene-CCO40_RS06700;Dbxref=GenBank:WP_001519708.1;Name=WP_001519708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=CCO40_RS06700;product=DUF3820 family protein;protein_id=WP_001519708.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1425551 1426549 . - . ID=gene-CCO40_RS06705;Name=CCO40_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06705;old_locus_tag=CCO40_06705 NZ_CP075116.1 Protein Homology CDS 1425551 1426549 . - 0 ID=cds-WP_000765569.1;Parent=gene-CCO40_RS06705;Dbxref=GenBank:WP_000765569.1;Name=WP_000765569.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461360.2;locus_tag=CCO40_RS06705;product=bile acid:sodium symporter family protein;protein_id=WP_000765569.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1426639 1427565 . + . ID=gene-CCO40_RS06710;Name=CCO40_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06710;old_locus_tag=CCO40_06710 NZ_CP075116.1 Protein Homology CDS 1426639 1427565 . + 0 ID=cds-WP_080170088.1;Parent=gene-CCO40_RS06710;Dbxref=GenBank:WP_080170088.1;Name=WP_080170088.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=CCO40_RS06710;product=LysR family transcriptional regulator;protein_id=WP_080170088.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1427627 1428388 . - . ID=gene-CCO40_RS06715;Name=CCO40_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06715;old_locus_tag=CCO40_06715 NZ_CP075116.1 Protein Homology CDS 1427627 1428388 . - 0 ID=cds-WP_000722926.1;Parent=gene-CCO40_RS06715;Dbxref=GenBank:WP_000722926.1;Name=WP_000722926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461358.1;locus_tag=CCO40_RS06715;product=outer membrane protein;protein_id=WP_000722926.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1428644 1429477 . + . ID=gene-CCO40_RS06720;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=CCO40_RS06720;old_locus_tag=CCO40_06720 NZ_CP075116.1 Protein Homology CDS 1428644 1429477 . + 0 ID=cds-WP_001119748.1;Parent=gene-CCO40_RS06720;Dbxref=GenBank:WP_001119748.1;Name=WP_001119748.1;Ontology_term=GO:0055086,GO:0004731,GO:0005737;gbkey=CDS;gene=xapA;go_component=cytoplasm|0005737||IEA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing small molecule metabolic process|0055086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448816.1;locus_tag=CCO40_RS06720;product=xanthosine phosphorylase;protein_id=WP_001119748.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1429532 1430788 . + . ID=gene-CCO40_RS06725;Name=CCO40_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06725;old_locus_tag=CCO40_06725 NZ_CP075116.1 Protein Homology CDS 1429532 1430788 . + 0 ID=cds-WP_000513241.1;Parent=gene-CCO40_RS06725;Dbxref=GenBank:WP_000513241.1;Name=WP_000513241.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=CCO40_RS06725;product=nucleoside permease;protein_id=WP_000513241.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1430847 1431005 . + . ID=gene-CCO40_RS06730;Name=CCO40_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06730;old_locus_tag=CCO40_06730 NZ_CP075116.1 Protein Homology CDS 1430847 1431005 . + 0 ID=cds-WP_000658727.1;Parent=gene-CCO40_RS06730;Dbxref=GenBank:WP_000658727.1;Name=WP_000658727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658729.1;locus_tag=CCO40_RS06730;product=XapX domain-containing protein;protein_id=WP_000658727.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1431057 1431941 . + . ID=gene-CCO40_RS06735;Name=CCO40_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06735;old_locus_tag=CCO40_06735 NZ_CP075116.1 Protein Homology CDS 1431057 1431941 . + 0 ID=cds-WP_000438890.1;Parent=gene-CCO40_RS06735;Dbxref=GenBank:WP_000438890.1;Name=WP_000438890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461355.1;locus_tag=CCO40_RS06735;product=LysR family transcriptional regulator;protein_id=WP_000438890.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1432105 1432180 . - . ID=gene-CCO40_RS06740;Name=CCO40_RS06740;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS06740;old_locus_tag=CCO40_06740 NZ_CP075116.1 tRNAscan-SE tRNA 1432105 1432180 . - . ID=rna-CCO40_RS06740;Parent=gene-CCO40_RS06740;anticodon=(pos:complement(1432145..1432147));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS06740;product=tRNA-Lys NZ_CP075116.1 tRNAscan-SE exon 1432105 1432180 . - . ID=exon-CCO40_RS06740-1;Parent=rna-CCO40_RS06740;anticodon=(pos:complement(1432145..1432147));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS06740;product=tRNA-Lys NZ_CP075116.1 RefSeq gene 1432185 1432260 . - . ID=gene-CCO40_RS06745;Name=CCO40_RS06745;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS06745;old_locus_tag=CCO40_06745 NZ_CP075116.1 tRNAscan-SE tRNA 1432185 1432260 . - . ID=rna-CCO40_RS06745;Parent=gene-CCO40_RS06745;anticodon=(pos:complement(1432225..1432227));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS06745;product=tRNA-Val NZ_CP075116.1 tRNAscan-SE exon 1432185 1432260 . - . ID=exon-CCO40_RS06745-1;Parent=rna-CCO40_RS06745;anticodon=(pos:complement(1432225..1432227));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS06745;product=tRNA-Val NZ_CP075116.1 RefSeq gene 1432302 1432377 . - . ID=gene-CCO40_RS06750;Name=CCO40_RS06750;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS06750;old_locus_tag=CCO40_06750 NZ_CP075116.1 tRNAscan-SE tRNA 1432302 1432377 . - . ID=rna-CCO40_RS06750;Parent=gene-CCO40_RS06750;anticodon=(pos:complement(1432342..1432344));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS06750;product=tRNA-Val NZ_CP075116.1 tRNAscan-SE exon 1432302 1432377 . - . ID=exon-CCO40_RS06750-1;Parent=rna-CCO40_RS06750;anticodon=(pos:complement(1432342..1432344));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS06750;product=tRNA-Val NZ_CP075116.1 RefSeq gene 1432423 1432498 . - . ID=gene-CCO40_RS06755;Name=CCO40_RS06755;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS06755;old_locus_tag=CCO40_06755 NZ_CP075116.1 tRNAscan-SE tRNA 1432423 1432498 . - . ID=rna-CCO40_RS06755;Parent=gene-CCO40_RS06755;anticodon=(pos:complement(1432463..1432465));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS06755;product=tRNA-Val NZ_CP075116.1 tRNAscan-SE exon 1432423 1432498 . - . ID=exon-CCO40_RS06755-1;Parent=rna-CCO40_RS06755;anticodon=(pos:complement(1432463..1432465));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS06755;product=tRNA-Val NZ_CP075116.1 RefSeq gene 1432757 1434172 . + . ID=gene-CCO40_RS06760;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=CCO40_RS06760;old_locus_tag=CCO40_06760 NZ_CP075116.1 Protein Homology CDS 1432757 1434172 . + 0 ID=cds-WP_000695623.1;Parent=gene-CCO40_RS06760;Dbxref=GenBank:WP_000695623.1;Name=WP_000695623.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461354.1;locus_tag=CCO40_RS06760;product=glutamate--tRNA ligase;protein_id=WP_000695623.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1434226 1434618 . - . ID=gene-CCO40_RS06765;Name=CCO40_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06765;old_locus_tag=CCO40_06765 NZ_CP075116.1 Protein Homology CDS 1434226 1434618 . - 0 ID=cds-WP_000826515.1;Parent=gene-CCO40_RS06765;Dbxref=GenBank:WP_000826515.1;Name=WP_000826515.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461353.1;locus_tag=CCO40_RS06765;product=MerR family transcriptional regulator;protein_id=WP_000826515.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1434620 1434982 . - . ID=gene-CCO40_RS06770;Name=CCO40_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06770;old_locus_tag=CCO40_06770 NZ_CP075116.1 Protein Homology CDS 1434620 1434982 . - 0 ID=cds-WP_000472034.1;Parent=gene-CCO40_RS06770;Dbxref=GenBank:WP_000472034.1;Name=WP_000472034.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461352.1;locus_tag=CCO40_RS06770;product=MerR family transcriptional regulator;protein_id=WP_000472034.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1435204 1435279 . + . ID=gene-CCO40_RS06775;Name=CCO40_RS06775;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS06775;old_locus_tag=CCO40_06775 NZ_CP075116.1 tRNAscan-SE tRNA 1435204 1435279 . + . ID=rna-CCO40_RS06775;Parent=gene-CCO40_RS06775;anticodon=(pos:1435237..1435239);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS06775;product=tRNA-Ala NZ_CP075116.1 tRNAscan-SE exon 1435204 1435279 . + . ID=exon-CCO40_RS06775-1;Parent=rna-CCO40_RS06775;anticodon=(pos:1435237..1435239);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS06775;product=tRNA-Ala NZ_CP075116.1 RefSeq gene 1435322 1435397 . + . ID=gene-CCO40_RS06780;Name=CCO40_RS06780;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS06780;old_locus_tag=CCO40_06780 NZ_CP075116.1 tRNAscan-SE tRNA 1435322 1435397 . + . ID=rna-CCO40_RS06780;Parent=gene-CCO40_RS06780;anticodon=(pos:1435355..1435357);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS06780;product=tRNA-Ala NZ_CP075116.1 tRNAscan-SE exon 1435322 1435397 . + . ID=exon-CCO40_RS06780-1;Parent=rna-CCO40_RS06780;anticodon=(pos:1435355..1435357);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS06780;product=tRNA-Ala NZ_CP075116.1 RefSeq gene 1435588 1437777 . + . ID=gene-CCO40_RS06785;Name=CCO40_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06785;old_locus_tag=CCO40_06785 NZ_CP075116.1 Protein Homology CDS 1435588 1437777 . + 0 ID=cds-WP_079842847.1;Parent=gene-CCO40_RS06785;Dbxref=GenBank:WP_079842847.1;Name=WP_079842847.1;Ontology_term=GO:0000160,GO:0007165,GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461351.1;locus_tag=CCO40_RS06785;product=EAL domain-containing protein;protein_id=WP_079842847.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1437830 1439032 . - . ID=gene-CCO40_RS06790;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=CCO40_RS06790;old_locus_tag=CCO40_06790 NZ_CP075116.1 Protein Homology CDS 1437830 1439032 . - 0 ID=cds-WP_000376347.1;Parent=gene-CCO40_RS06790;Dbxref=GenBank:WP_000376347.1;Name=WP_000376347.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461350.1;locus_tag=CCO40_RS06790;product=nucleoside permease NupC;protein_id=WP_000376347.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1439338 1439382 . + . ID=gene-CCO40_RS22755;Name=CCO40_RS22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22755 NZ_CP075116.1 Protein Homology CDS 1439338 1439382 . + 0 ID=cds-WP_418338175.1;Parent=gene-CCO40_RS22755;Dbxref=GenBank:WP_418338175.1;Name=WP_418338175.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049535.1;locus_tag=CCO40_RS22755;product=hypothetical protein;protein_id=WP_418338175.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1439375 1440616 . + . ID=gene-CCO40_RS06795;Name=CCO40_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06795;old_locus_tag=CCO40_06795 NZ_CP075116.1 Protein Homology CDS 1439375 1440616 . + 0 ID=cds-WP_000131734.1;Parent=gene-CCO40_RS06795;Dbxref=GenBank:WP_000131734.1;Name=WP_000131734.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461349.1;locus_tag=CCO40_RS06795;product=Nramp family divalent metal transporter;protein_id=WP_000131734.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1440677 1441003 . - . ID=gene-CCO40_RS06800;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=CCO40_RS06800;old_locus_tag=CCO40_06800 NZ_CP075116.1 Protein Homology CDS 1440677 1441003 . - 0 ID=cds-WP_000490091.1;Parent=gene-CCO40_RS06800;Dbxref=GenBank:WP_000490091.1;Name=WP_000490091.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461348.1;locus_tag=CCO40_RS06800;product=DUF2502 domain-containing protein YpeC;protein_id=WP_000490091.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1441117 1442115 . - . ID=gene-CCO40_RS06805;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=CCO40_RS06805;old_locus_tag=CCO40_06805 NZ_CP075116.1 Protein Homology CDS 1441117 1442115 . - 0 ID=cds-WP_001581436.1;Parent=gene-CCO40_RS06805;Dbxref=GenBank:WP_001581436.1;Name=WP_001581436.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461347.1;locus_tag=CCO40_RS06805;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_001581436.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1442295 1443947 . + . ID=gene-CCO40_RS06810;Name=CCO40_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06810;old_locus_tag=CCO40_06810 NZ_CP075116.1 Protein Homology CDS 1442295 1443947 . + 0 ID=cds-WP_001180856.1;Parent=gene-CCO40_RS06810;Dbxref=GenBank:WP_001180856.1;Name=WP_001180856.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461346.1;locus_tag=CCO40_RS06810;product=alpha-keto acid decarboxylase family protein;protein_id=WP_001180856.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1443967 1445202 . - . ID=gene-CCO40_RS06815;Name=CCO40_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06815;old_locus_tag=CCO40_06815 NZ_CP075116.1 Protein Homology CDS 1443967 1445202 . - 0 ID=cds-WP_000468920.1;Parent=gene-CCO40_RS06815;Dbxref=GenBank:WP_000468920.1;Name=WP_000468920.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=CCO40_RS06815;product=ion channel protein;protein_id=WP_000468920.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1445406 1446371 . + . ID=gene-CCO40_RS06820;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=CCO40_RS06820;old_locus_tag=CCO40_06820 NZ_CP075116.1 Protein Homology CDS 1445406 1446371 . + 0 ID=cds-WP_000170376.1;Parent=gene-CCO40_RS06820;Dbxref=GenBank:WP_000170376.1;Name=WP_000170376.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461344.1;locus_tag=CCO40_RS06820;product=glucokinase;protein_id=WP_000170376.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1447093 1448331 . + . ID=gene-CCO40_RS06825;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=CCO40_RS06825;old_locus_tag=CCO40_06825 NZ_CP075116.1 Protein Homology CDS 1447093 1448331 . + 0 ID=cds-WP_000763118.1;Parent=gene-CCO40_RS06825;Dbxref=GenBank:WP_000763118.1;Name=WP_000763118.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=CCO40_RS06825;product=alanine transaminase;protein_id=WP_000763118.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1448381 1448452 . - . ID=gene-CCO40_RS06830;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=CCO40_RS06830;old_locus_tag=CCO40_06830 NZ_CP075116.1 Protein Homology CDS 1448381 1448452 . - 0 ID=cds-WP_010723117.1;Parent=gene-CCO40_RS06830;Dbxref=GenBank:WP_010723117.1;Name=WP_010723117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=CCO40_RS06830;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1448855 1449775 . - . ID=gene-CCO40_RS06835;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=CCO40_RS06835;old_locus_tag=CCO40_06835 NZ_CP075116.1 Protein Homology CDS 1448855 1449775 . - 0 ID=cds-WP_023228115.1;Parent=gene-CCO40_RS06835;Dbxref=GenBank:WP_023228115.1;Name=WP_023228115.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461342.1;locus_tag=CCO40_RS06835;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_023228115.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1450297 1450539 . + . ID=gene-CCO40_RS06840;Name=CCO40_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06840;old_locus_tag=CCO40_06840 NZ_CP075116.1 Protein Homology CDS 1450297 1450539 . + 0 ID=cds-WP_000639889.1;Parent=gene-CCO40_RS06840;Dbxref=GenBank:WP_000639889.1;Name=WP_000639889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461341.1;locus_tag=CCO40_RS06840;product=YfdY family protein;protein_id=WP_000639889.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1450814 1452205 . - . ID=gene-CCO40_RS06845;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=CCO40_RS06845;old_locus_tag=CCO40_06845 NZ_CP075116.1 Protein Homology CDS 1450814 1452205 . - 0 ID=cds-WP_000955744.1;Parent=gene-CCO40_RS06845;Dbxref=GenBank:WP_000955744.1;Name=WP_000955744.1;Ontology_term=GO:0015760,GO:0035435,GO:0061513;gbkey=CDS;gene=pgtP;go_function=glucose 6-phosphate:phosphate antiporter activity|0061513||IEA;go_process=glucose-6-phosphate transport|0015760||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461340.1;locus_tag=CCO40_RS06845;product=phosphoglycerate transporter PgtP;protein_id=WP_000955744.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1452641 1453834 . + . ID=gene-CCO40_RS06850;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=CCO40_RS06850;old_locus_tag=CCO40_06850 NZ_CP075116.1 Protein Homology CDS 1452641 1453834 . + 0 ID=cds-WP_000467983.1;Parent=gene-CCO40_RS06850;Dbxref=GenBank:WP_000467983.1;Name=WP_000467983.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461339.1;locus_tag=CCO40_RS06850;product=phosphoglycerate transport regulator PgtC;protein_id=WP_000467983.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1453831 1455837 . + . ID=gene-CCO40_RS06855;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=CCO40_RS06855;old_locus_tag=CCO40_06855 NZ_CP075116.1 Protein Homology CDS 1453831 1455837 . + 0 ID=cds-WP_000678493.1;Parent=gene-CCO40_RS06855;Dbxref=GenBank:WP_000678493.1;Name=WP_000678493.1;Ontology_term=GO:0000160,GO:0000155,GO:0005524;gbkey=CDS;gene=pgtB;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=CCO40_RS06855;product=two-component system sensor histidine kinase PgtB;protein_id=WP_000678493.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1455827 1457074 . + . ID=gene-CCO40_RS06860;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=CCO40_RS06860;old_locus_tag=CCO40_06860 NZ_CP075116.1 Protein Homology CDS 1455827 1457074 . + 0 ID=cds-WP_045342224.1;Parent=gene-CCO40_RS06860;Dbxref=GenBank:WP_045342224.1;Name=WP_045342224.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;gene=pgtA;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=CCO40_RS06860;product=two-component system response regulator PgtA;protein_id=WP_045342224.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1457342 1458280 . + . ID=gene-CCO40_RS06865;Name=pgtE;gbkey=Gene;gene=pgtE;gene_biotype=protein_coding;locus_tag=CCO40_RS06865;old_locus_tag=CCO40_06865 NZ_CP075116.1 Protein Homology CDS 1457342 1458280 . + 0 ID=cds-WP_000716014.1;Parent=gene-CCO40_RS06865;Dbxref=GenBank:WP_000716014.1;Name=WP_000716014.1;gbkey=CDS;gene=pgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461336.1;locus_tag=CCO40_RS06865;product=omptin family outer membrane protease PgtE;protein_id=WP_000716014.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1458437 1458511 . - . ID=gene-CCO40_RS06870;Name=CCO40_RS06870;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS06870;old_locus_tag=CCO40_06870 NZ_CP075116.1 tRNAscan-SE tRNA 1458437 1458511 . - . ID=rna-CCO40_RS06870;Parent=gene-CCO40_RS06870;anticodon=(pos:complement(1458476..1458478));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS06870;product=tRNA-Arg NZ_CP075116.1 tRNAscan-SE exon 1458437 1458511 . - . ID=exon-CCO40_RS06870-1;Parent=rna-CCO40_RS06870;anticodon=(pos:complement(1458476..1458478));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS06870;product=tRNA-Arg NZ_CP075116.1 RefSeq gene 1458587 1459528 . - . ID=gene-CCO40_RS06875;Name=CCO40_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06875;old_locus_tag=CCO40_06875 NZ_CP075116.1 Protein Homology CDS 1458587 1459528 . - 0 ID=cds-WP_000377772.1;Parent=gene-CCO40_RS06875;Dbxref=GenBank:WP_000377772.1;Name=WP_000377772.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461335.1;locus_tag=CCO40_RS06875;product=formate/nitrite transporter family protein;protein_id=WP_000377772.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1459817 1460572 . + . ID=gene-CCO40_RS06880;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=CCO40_RS06880;old_locus_tag=CCO40_06880 NZ_CP075116.1 Protein Homology CDS 1459817 1460572 . + 0 ID=cds-WP_000776787.1;Parent=gene-CCO40_RS06880;Dbxref=GenBank:WP_000776787.1;Name=WP_000776787.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461334.1;locus_tag=CCO40_RS06880;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776787.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1460633 1461940 . - . ID=gene-CCO40_RS06885;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=CCO40_RS06885;old_locus_tag=CCO40_06885 NZ_CP075116.1 Protein Homology CDS 1460633 1461940 . - 0 ID=cds-WP_001518618.1;Parent=gene-CCO40_RS06885;Dbxref=GenBank:WP_001518618.1;Name=WP_001518618.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=CCO40_RS06885;product=long-chain fatty acid transporter FadL;protein_id=WP_001518618.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1462311 1462595 . + . ID=gene-CCO40_RS06890;Name=CCO40_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06890;old_locus_tag=CCO40_06890 NZ_CP075116.1 Protein Homology CDS 1462311 1462595 . + 0 ID=cds-WP_000030904.1;Parent=gene-CCO40_RS06890;Dbxref=GenBank:WP_000030904.1;Name=WP_000030904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=CCO40_RS06890;product=YfcZ/YiiS family protein;protein_id=WP_000030904.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1462773 1464083 . + . ID=gene-CCO40_RS06895;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=CCO40_RS06895;old_locus_tag=CCO40_06895 NZ_CP075116.1 Protein Homology CDS 1462773 1464083 . + 0 ID=cds-WP_023993418.1;Parent=gene-CCO40_RS06895;Dbxref=GenBank:WP_023993418.1;Name=WP_023993418.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461331.2;locus_tag=CCO40_RS06895;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_023993418.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1464083 1466230 . + . ID=gene-CCO40_RS06900;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=CCO40_RS06900;old_locus_tag=CCO40_06900 NZ_CP075116.1 Protein Homology CDS 1464083 1466230 . + 0 ID=cds-WP_094889245.1;Parent=gene-CCO40_RS06900;Dbxref=GenBank:WP_094889245.1;Name=WP_094889245.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=(3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=CCO40_RS06900;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_094889245.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1466439 1466924 . + . ID=gene-CCO40_RS06905;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=CCO40_RS06905;old_locus_tag=CCO40_06905 NZ_CP075116.1 Protein Homology CDS 1466439 1466924 . + 0 ID=cds-WP_001195800.1;Parent=gene-CCO40_RS06905;Dbxref=GenBank:WP_001195800.1;Name=WP_001195800.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=CCO40_RS06905;product=phosphohistidine phosphatase SixA;protein_id=WP_001195800.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1467024 1467575 . - . ID=gene-CCO40_RS06910;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=CCO40_RS06910;old_locus_tag=CCO40_06910 NZ_CP075116.1 Protein Homology CDS 1467024 1467575 . - 0 ID=cds-WP_000730794.1;Parent=gene-CCO40_RS06910;Dbxref=GenBank:WP_000730794.1;Name=WP_000730794.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461328.1;locus_tag=CCO40_RS06910;product=endonuclease SmrB;protein_id=WP_000730794.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1467741 1468673 . + . ID=gene-CCO40_RS06915;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=CCO40_RS06915;old_locus_tag=CCO40_06915 NZ_CP075116.1 Protein Homology CDS 1467741 1468673 . + 0 ID=cds-WP_001542329.1;Parent=gene-CCO40_RS06915;Dbxref=GenBank:WP_001542329.1;Name=WP_001542329.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=CCO40_RS06915;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001542329.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1468709 1469794 . + . ID=gene-CCO40_RS06920;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=CCO40_RS06920;old_locus_tag=CCO40_06920 NZ_CP075116.1 Protein Homology CDS 1468709 1469794 . + 0 ID=cds-WP_000918456.1;Parent=gene-CCO40_RS06920;Dbxref=GenBank:WP_000918456.1;Name=WP_000918456.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=CCO40_RS06920;product=chorismate synthase;protein_id=WP_000918456.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1469798 1470622 . + . ID=gene-CCO40_RS06925;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=CCO40_RS06925;old_locus_tag=CCO40_06925 NZ_CP075116.1 Protein Homology CDS 1469798 1470622 . + 0 ID=cds-WP_000750428.1;Parent=gene-CCO40_RS06925;Dbxref=GenBank:WP_000750428.1;Name=WP_000750428.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461325.1;locus_tag=CCO40_RS06925;product=penicillin-insensitive murein endopeptidase;protein_id=WP_000750428.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1470622 1471431 . + . ID=gene-CCO40_RS06930;Name=CCO40_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06930;old_locus_tag=CCO40_06930 NZ_CP075116.1 Protein Homology CDS 1470622 1471431 . + 0 ID=cds-WP_000368599.1;Parent=gene-CCO40_RS06930;Dbxref=GenBank:WP_000368599.1;Name=WP_000368599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461324.1;locus_tag=CCO40_RS06930;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000368599.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1471431 1471979 . + . ID=gene-CCO40_RS06935;Name=CCO40_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06935;old_locus_tag=CCO40_06935 NZ_CP075116.1 Protein Homology CDS 1471431 1471979 . + 0 ID=cds-WP_001066345.1;Parent=gene-CCO40_RS06935;Dbxref=GenBank:WP_001066345.1;Name=WP_001066345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=CCO40_RS06935;product=elongation factor P hydroxylase;protein_id=WP_001066345.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1472012 1472287 . + . ID=gene-CCO40_RS06940;Name=CCO40_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06940;old_locus_tag=CCO40_06940 NZ_CP075116.1 Protein Homology CDS 1472012 1472287 . + 0 ID=cds-WP_000559749.1;Parent=gene-CCO40_RS06940;Dbxref=GenBank:WP_000559749.1;Name=WP_000559749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461322.1;locus_tag=CCO40_RS06940;product=YfcL family protein;protein_id=WP_000559749.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1472339 1474339 . - . ID=gene-CCO40_RS06945;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=CCO40_RS06945;old_locus_tag=CCO40_06945 NZ_CP075116.1 Protein Homology CDS 1472339 1474339 . - 0 ID=cds-WP_000816112.1;Parent=gene-CCO40_RS06945;Dbxref=GenBank:WP_000816112.1;Name=WP_000816112.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540542.1;locus_tag=CCO40_RS06945;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmC2/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC1;protein_id=WP_000816112.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1474499 1475713 . + . ID=gene-CCO40_RS06950;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=CCO40_RS06950;old_locus_tag=CCO40_06950 NZ_CP075116.1 Protein Homology CDS 1474499 1475713 . + 0 ID=cds-WP_000817161.1;Parent=gene-CCO40_RS06950;Dbxref=GenBank:WP_000817161.1;Name=WP_000817161.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461320.1;locus_tag=CCO40_RS06950;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817161.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1475811 1476467 . + . ID=gene-CCO40_RS06955;Name=CCO40_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06955;old_locus_tag=CCO40_06955 NZ_CP075116.1 Protein Homology CDS 1475811 1476467 . + 0 ID=cds-WP_001142897.1;Parent=gene-CCO40_RS06955;Dbxref=GenBank:WP_001142897.1;Name=WP_001142897.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461319.1;locus_tag=CCO40_RS06955;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_001142897.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1476534 1477052 . - . ID=gene-CCO40_RS06960;Name=CCO40_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06960;old_locus_tag=CCO40_06960 NZ_CP075116.1 Protein Homology CDS 1476534 1477052 . - 0 ID=cds-WP_000847541.1;Parent=gene-CCO40_RS06960;Dbxref=GenBank:WP_000847541.1;Name=WP_000847541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461318.1;locus_tag=CCO40_RS06960;product=YqhG/Tai3 family protein;protein_id=WP_000847541.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1477052 1477420 . - . ID=gene-CCO40_RS06965;Name=CCO40_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06965;old_locus_tag=CCO40_06965 NZ_CP075116.1 Protein Homology CDS 1477052 1477420 . - 0 ID=cds-WP_000118258.1;Parent=gene-CCO40_RS06965;Dbxref=GenBank:WP_000118258.1;Name=WP_000118258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461317.1;locus_tag=CCO40_RS06965;product=NlpC/P60 family protein;protein_id=WP_000118258.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1477589 1477837 . - . ID=gene-CCO40_RS06970;Name=CCO40_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06970;old_locus_tag=CCO40_06970 NZ_CP075116.1 Protein Homology CDS 1477589 1477837 . - 0 ID=cds-WP_000433427.1;Parent=gene-CCO40_RS06970;Dbxref=GenBank:WP_000433427.1;Name=WP_000433427.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461316.1;locus_tag=CCO40_RS06970;product=helix-turn-helix domain-containing protein;protein_id=WP_000433427.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1478010 1478384 . + . ID=gene-CCO40_RS06975;Name=CCO40_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06975;old_locus_tag=CCO40_06975 NZ_CP075116.1 Protein Homology CDS 1478010 1478384 . + 0 ID=cds-WP_001051266.1;Parent=gene-CCO40_RS06975;Dbxref=GenBank:WP_001051266.1;Name=WP_001051266.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461315.1;locus_tag=CCO40_RS06975;product=MerR family transcriptional regulator;protein_id=WP_001051266.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1478565 1479743 . + . ID=gene-CCO40_RS06980;Name=CCO40_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06980;old_locus_tag=CCO40_06980 NZ_CP075116.1 Protein Homology CDS 1478565 1479743 . + 0 ID=cds-WP_000127721.1;Parent=gene-CCO40_RS06980;Dbxref=GenBank:WP_000127721.1;Name=WP_000127721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461314.1;locus_tag=CCO40_RS06980;product=MFS transporter;protein_id=WP_000127721.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1479740 1480741 . - . ID=gene-CCO40_RS06985;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=CCO40_RS06985;old_locus_tag=CCO40_06985 NZ_CP075116.1 Protein Homology CDS 1479740 1480741 . - 0 ID=cds-WP_000553395.1;Parent=gene-CCO40_RS06985;Dbxref=GenBank:WP_000553395.1;Name=WP_000553395.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461313.1;locus_tag=CCO40_RS06985;product=flagella biosynthesis regulator Flk;protein_id=WP_000553395.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1480845 1481981 . + . ID=gene-CCO40_RS06990;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=CCO40_RS06990;old_locus_tag=CCO40_06990 NZ_CP075116.1 Protein Homology CDS 1480845 1481981 . + 0 ID=cds-WP_000699178.1;Parent=gene-CCO40_RS06990;Dbxref=GenBank:WP_000699178.1;Name=WP_000699178.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461312.1;locus_tag=CCO40_RS06990;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_000699178.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1482049 1483062 . + . ID=gene-CCO40_RS06995;Name=CCO40_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS06995;old_locus_tag=CCO40_06995 NZ_CP075116.1 Protein Homology CDS 1482049 1483062 . + 0 ID=cds-WP_001289138.1;Parent=gene-CCO40_RS06995;Dbxref=GenBank:WP_001289138.1;Name=WP_001289138.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461311.1;locus_tag=CCO40_RS06995;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_001289138.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1483062 1483874 . + . ID=gene-CCO40_RS07000;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=CCO40_RS07000;old_locus_tag=CCO40_07000 NZ_CP075116.1 Protein Homology CDS 1483062 1483874 . + 0 ID=cds-WP_000016631.1;Parent=gene-CCO40_RS07000;Dbxref=GenBank:WP_000016631.1;Name=WP_000016631.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461310.1;locus_tag=CCO40_RS07000;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_000016631.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1483923 1484582 . + . ID=gene-CCO40_RS07005;Name=CCO40_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07005;old_locus_tag=CCO40_07005 NZ_CP075116.1 Protein Homology CDS 1483923 1484582 . + 0 ID=cds-WP_000364315.1;Parent=gene-CCO40_RS07005;Dbxref=GenBank:WP_000364315.1;Name=WP_000364315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461309.1;locus_tag=CCO40_RS07005;product=DedA family protein;protein_id=WP_000364315.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1484732 1485646 . + . ID=gene-CCO40_RS07010;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=CCO40_RS07010;old_locus_tag=CCO40_07010 NZ_CP075116.1 Protein Homology CDS 1484732 1485646 . + 0 ID=cds-WP_000118383.1;Parent=gene-CCO40_RS07010;Dbxref=GenBank:WP_000118383.1;Name=WP_000118383.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461308.1;locus_tag=CCO40_RS07010;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_000118383.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1485714 1486982 . + . ID=gene-CCO40_RS07015;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=CCO40_RS07015;old_locus_tag=CCO40_07015 NZ_CP075116.1 Protein Homology CDS 1485714 1486982 . + 0 ID=cds-WP_000792292.1;Parent=gene-CCO40_RS07015;Dbxref=GenBank:WP_000792292.1;Name=WP_000792292.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=CCO40_RS07015;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_000792292.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1486972 1487646 . + . ID=gene-CCO40_RS07020;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=CCO40_RS07020;old_locus_tag=CCO40_07020 NZ_CP075116.1 Protein Homology CDS 1486972 1487646 . + 0 ID=cds-WP_000157031.1;Parent=gene-CCO40_RS07020;Dbxref=GenBank:WP_000157031.1;Name=WP_000157031.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=CCO40_RS07020;product=cell division protein DedD;protein_id=WP_000157031.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1487957 1488445 . + . ID=gene-CCO40_RS07025;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=CCO40_RS07025;old_locus_tag=CCO40_07025 NZ_CP075116.1 Protein Homology CDS 1487957 1488445 . + 0 ID=cds-WP_000262102.1;Parent=gene-CCO40_RS07025;Dbxref=GenBank:WP_000262102.1;Name=WP_000262102.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461305.1;locus_tag=CCO40_RS07025;product=colicin V production protein;protein_id=WP_000262102.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1488483 1490000 . + . ID=gene-CCO40_RS07030;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=CCO40_RS07030;old_locus_tag=CCO40_07030 NZ_CP075116.1 Protein Homology CDS 1488483 1490000 . + 0 ID=cds-WP_000334205.1;Parent=gene-CCO40_RS07030;Dbxref=GenBank:WP_000334205.1;Name=WP_000334205.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=CCO40_RS07030;product=amidophosphoribosyltransferase;protein_id=WP_000334205.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1490036 1491463 . - . ID=gene-CCO40_RS07035;Name=CCO40_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07035;old_locus_tag=CCO40_07035 NZ_CP075116.1 Protein Homology CDS 1490036 1491463 . - 0 ID=cds-WP_000168929.1;Parent=gene-CCO40_RS07035;Dbxref=GenBank:WP_000168929.1;Name=WP_000168929.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461303.1;locus_tag=CCO40_RS07035;product=sigma-54 interaction domain-containing protein;protein_id=WP_000168929.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1491674 1493071 . + . ID=gene-CCO40_RS07040;Name=dokD;gbkey=Gene;gene=dokD;gene_biotype=protein_coding;locus_tag=CCO40_RS07040;old_locus_tag=CCO40_07040 NZ_CP075116.1 Protein Homology CDS 1491674 1493071 . + 0 ID=cds-WP_000132306.1;Parent=gene-CCO40_RS07040;Dbxref=GenBank:WP_000132306.1;Name=WP_000132306.1;gbkey=CDS;gene=dokD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461302.1;locus_tag=CCO40_RS07040;product=ornithine/lysine decarboxylase DokD;protein_id=WP_000132306.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1493162 1494583 . + . ID=gene-CCO40_RS07045;Name=CCO40_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07045;old_locus_tag=CCO40_07045 NZ_CP075116.1 Protein Homology CDS 1493162 1494583 . + 0 ID=cds-WP_000072512.1;Parent=gene-CCO40_RS07045;Dbxref=GenBank:WP_000072512.1;Name=WP_000072512.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=CCO40_RS07045;product=APC family permease;protein_id=WP_000072512.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1494585 1495688 . + . ID=gene-CCO40_RS07050;Name=CCO40_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07050;old_locus_tag=CCO40_07050 NZ_CP075116.1 Protein Homology CDS 1494585 1495688 . + 0 ID=cds-WP_000281907.1;Parent=gene-CCO40_RS07050;Dbxref=GenBank:WP_000281907.1;Name=WP_000281907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461300.1;locus_tag=CCO40_RS07050;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=WP_000281907.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1495752 1497158 . + . ID=gene-CCO40_RS07055;Name=CCO40_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07055;old_locus_tag=CCO40_07055 NZ_CP075116.1 Protein Homology CDS 1495752 1497158 . + 0 ID=cds-WP_000380346.1;Parent=gene-CCO40_RS07055;Dbxref=GenBank:WP_000380346.1;Name=WP_000380346.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461299.1;locus_tag=CCO40_RS07055;product=amino acid permease;protein_id=WP_000380346.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1497185 1497754 . + . ID=gene-CCO40_RS07060;Name=CCO40_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07060;old_locus_tag=CCO40_07060 NZ_CP075116.1 Protein Homology CDS 1497185 1497754 . + 0 ID=cds-WP_000825682.1;Parent=gene-CCO40_RS07060;Dbxref=GenBank:WP_000825682.1;Name=WP_000825682.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461298.1;locus_tag=CCO40_RS07060;product=UbiX family flavin prenyltransferase;protein_id=WP_000825682.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1498043 1498825 . + . ID=gene-CCO40_RS07065;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=CCO40_RS07065;old_locus_tag=CCO40_07065 NZ_CP075116.1 Protein Homology CDS 1498043 1498825 . + 0 ID=cds-WP_000754423.1;Parent=gene-CCO40_RS07065;Dbxref=GenBank:WP_000754423.1;Name=WP_000754423.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=CCO40_RS07065;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_000754423.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1499063 1499845 . + . ID=gene-CCO40_RS07070;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=CCO40_RS07070;old_locus_tag=CCO40_07070 NZ_CP075116.1 Protein Homology CDS 1499063 1499845 . + 0 ID=cds-WP_000731868.1;Parent=gene-CCO40_RS07070;Dbxref=GenBank:WP_000731868.1;Name=WP_000731868.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=CCO40_RS07070;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000731868.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1500026 1500712 . + . ID=gene-CCO40_RS07075;Name=CCO40_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07075;old_locus_tag=CCO40_07075 NZ_CP075116.1 Protein Homology CDS 1500026 1500712 . + 0 ID=cds-WP_000965498.1;Parent=gene-CCO40_RS07075;Dbxref=GenBank:WP_000965498.1;Name=WP_000965498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=CCO40_RS07075;product=histidine ABC transporter permease HisQ;protein_id=WP_000965498.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1500709 1501416 . + . ID=gene-CCO40_RS07080;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=CCO40_RS07080;old_locus_tag=CCO40_07080 NZ_CP075116.1 Protein Homology CDS 1500709 1501416 . + 0 ID=cds-WP_000569771.1;Parent=gene-CCO40_RS07080;Dbxref=GenBank:WP_000569771.1;Name=WP_000569771.1;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461294.1;locus_tag=CCO40_RS07080;product=histidine ABC transporter permease HisM;protein_id=WP_000569771.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1501430 1502203 . + . ID=gene-CCO40_RS07085;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=CCO40_RS07085;old_locus_tag=CCO40_07085 NZ_CP075116.1 Protein Homology CDS 1501430 1502203 . + 0 ID=cds-WP_001293591.1;Parent=gene-CCO40_RS07085;Dbxref=GenBank:WP_001293591.1;Name=WP_001293591.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=CCO40_RS07085;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_001293591.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1502255 1503148 . - . ID=gene-CCO40_RS07090;Name=CCO40_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07090;old_locus_tag=CCO40_07090 NZ_CP075116.1 Protein Homology CDS 1502255 1503148 . - 0 ID=cds-WP_080190820.1;Parent=gene-CCO40_RS07090;Dbxref=GenBank:WP_080190820.1;Name=WP_080190820.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461292.1;locus_tag=CCO40_RS07090;product=TIGR01777 family oxidoreductase;protein_id=WP_080190820.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1503274 1503921 . - . ID=gene-CCO40_RS07095;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=CCO40_RS07095;old_locus_tag=CCO40_07095 NZ_CP075116.1 Protein Homology CDS 1503274 1503921 . - 0 ID=cds-WP_000566562.1;Parent=gene-CCO40_RS07095;Dbxref=GenBank:WP_000566562.1;Name=WP_000566562.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461291.1;locus_tag=CCO40_RS07095;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_000566562.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1504064 1504708 . + . ID=gene-CCO40_RS07100;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=CCO40_RS07100;old_locus_tag=CCO40_07100 NZ_CP075116.1 Protein Homology CDS 1504064 1504708 . + 0 ID=cds-WP_000043010.1;Parent=gene-CCO40_RS07100;Dbxref=GenBank:WP_000043010.1;Name=WP_000043010.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461290.1;locus_tag=CCO40_RS07100;product=glutathione transferase;protein_id=WP_000043010.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1504764 1505315 . + . ID=gene-CCO40_RS07105;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=CCO40_RS07105;old_locus_tag=CCO40_07105 NZ_CP075116.1 Protein Homology CDS 1504764 1505315 . + 0 ID=cds-WP_080190821.1;Parent=gene-CCO40_RS07105;Dbxref=GenBank:WP_080190821.1;Name=WP_080190821.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461289.1;locus_tag=CCO40_RS07105;product=phosphodiesterase;protein_id=WP_080190821.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1505372 1505926 . + . ID=gene-CCO40_RS07110;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=CCO40_RS07110;old_locus_tag=CCO40_07110 NZ_CP075116.1 Protein Homology CDS 1505372 1505926 . + 0 ID=cds-WP_023994401.1;Parent=gene-CCO40_RS07110;Dbxref=GenBank:WP_023994401.1;Name=WP_023994401.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461288.1;locus_tag=CCO40_RS07110;product=NUDIX hydrolase YfcD;protein_id=WP_023994401.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1505932 1506951 . - . ID=gene-CCO40_RS07115;Name=CCO40_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07115;old_locus_tag=CCO40_07115 NZ_CP075116.1 Protein Homology CDS 1505932 1506951 . - 0 ID=cds-WP_000026949.1;Parent=gene-CCO40_RS07115;Dbxref=GenBank:WP_000026949.1;Name=WP_000026949.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=CCO40_RS07115;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000026949.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1507204 1507647 . + . ID=gene-CCO40_RS07120;Name=CCO40_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07120;old_locus_tag=CCO40_07120 NZ_CP075116.1 Protein Homology CDS 1507204 1507647 . + 0 ID=cds-WP_000901809.1;Parent=gene-CCO40_RS07120;Dbxref=GenBank:WP_000901809.1;Name=WP_000901809.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0034219,GO:0008982,GO:0016301,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461286.1;locus_tag=CCO40_RS07120;product=PTS sugar transporter subunit IIA;protein_id=WP_000901809.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1507728 1508000 . + . ID=gene-CCO40_RS07125;Name=CCO40_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07125;old_locus_tag=CCO40_07125 NZ_CP075116.1 Protein Homology CDS 1507728 1508000 . + 0 ID=cds-WP_000699818.1;Parent=gene-CCO40_RS07125;Dbxref=GenBank:WP_000699818.1;Name=WP_000699818.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461285.1;locus_tag=CCO40_RS07125;product=PTS sugar transporter subunit IIB;protein_id=WP_000699818.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1508021 1509412 . + . ID=gene-CCO40_RS07130;Name=CCO40_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07130;old_locus_tag=CCO40_07130 NZ_CP075116.1 Protein Homology CDS 1508021 1509412 . + 0 ID=cds-WP_001522266.1;Parent=gene-CCO40_RS07130;Dbxref=GenBank:WP_001522266.1;Name=WP_001522266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461284.3;locus_tag=CCO40_RS07130;product=PTS ascorbate transporter subunit IIC;protein_id=WP_001522266.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1509409 1510239 . + . ID=gene-CCO40_RS07135;Name=CCO40_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07135;old_locus_tag=CCO40_07135 NZ_CP075116.1 Protein Homology CDS 1509409 1510239 . + 0 ID=cds-WP_001103272.1;Parent=gene-CCO40_RS07135;Dbxref=GenBank:WP_001103272.1;Name=WP_001103272.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=CCO40_RS07135;product=transketolase;protein_id=WP_001103272.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1510232 1511185 . + . ID=gene-CCO40_RS07140;Name=CCO40_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07140;old_locus_tag=CCO40_07140 NZ_CP075116.1 Protein Homology CDS 1510232 1511185 . + 0 ID=cds-WP_000593024.1;Parent=gene-CCO40_RS07140;Dbxref=GenBank:WP_000593024.1;Name=WP_000593024.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=CCO40_RS07140;product=transketolase family protein;protein_id=WP_000593024.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1511234 1512754 . - . ID=gene-CCO40_RS07145;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=CCO40_RS07145;old_locus_tag=CCO40_07145 NZ_CP075116.1 Protein Homology CDS 1511234 1512754 . - 0 ID=cds-WP_000117932.1;Parent=gene-CCO40_RS07145;Dbxref=GenBank:WP_000117932.1;Name=WP_000117932.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461281.1;locus_tag=CCO40_RS07145;product=putative basic amino acid antiporter YfcC;protein_id=WP_000117932.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1512972 1515116 . - . ID=gene-CCO40_RS07150;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CCO40_RS07150;old_locus_tag=CCO40_07150 NZ_CP075116.1 Protein Homology CDS 1512972 1515116 . - 0 ID=cds-WP_000086692.1;Parent=gene-CCO40_RS07150;Dbxref=GenBank:WP_000086692.1;Name=WP_000086692.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461280.1;locus_tag=CCO40_RS07150;product=phosphate acetyltransferase;protein_id=WP_000086692.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1515193 1516395 . - . ID=gene-CCO40_RS07155;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=CCO40_RS07155;old_locus_tag=CCO40_07155 NZ_CP075116.1 Protein Homology CDS 1515193 1516395 . - 0 ID=cds-WP_000095689.1;Parent=gene-CCO40_RS07155;Dbxref=GenBank:WP_000095689.1;Name=WP_000095689.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=CCO40_RS07155;product=acetate kinase;protein_id=WP_000095689.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1516735 1517190 . + . ID=gene-CCO40_RS07160;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=CCO40_RS07160;old_locus_tag=CCO40_07160 NZ_CP075116.1 Protein Homology CDS 1516735 1517190 . + 0 ID=cds-WP_000106617.1;Parent=gene-CCO40_RS07160;Dbxref=GenBank:WP_000106617.1;Name=WP_000106617.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=CCO40_RS07160;product=terminus macrodomain insulation protein YfbV;protein_id=WP_000106617.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1517273 1517767 . + . ID=gene-CCO40_RS07165;Name=CCO40_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07165;old_locus_tag=CCO40_07165 NZ_CP075116.1 Protein Homology CDS 1517273 1517767 . + 0 ID=cds-WP_000426135.1;Parent=gene-CCO40_RS07165;Dbxref=GenBank:WP_000426135.1;Name=WP_000426135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=CCO40_RS07165;product=YfbU family protein;protein_id=WP_000426135.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1517760 1518437 . + . ID=gene-CCO40_RS07170;Name=CCO40_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07170;old_locus_tag=CCO40_07170 NZ_CP075116.1 Protein Homology CDS 1517760 1518437 . + 0 ID=cds-WP_001555201.1;Parent=gene-CCO40_RS07170;Dbxref=GenBank:WP_001555201.1;Name=WP_001555201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461276.3;locus_tag=CCO40_RS07170;product=sugar phosphatase;protein_id=WP_001555201.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1518514 1520340 . + . ID=gene-CCO40_RS07175;Name=CCO40_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07175;old_locus_tag=CCO40_07175 NZ_CP075116.1 Protein Homology CDS 1518514 1520340 . + 0 ID=cds-WP_001012856.1;Parent=gene-CCO40_RS07175;Dbxref=GenBank:WP_001012856.1;Name=WP_001012856.1;Ontology_term=GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=CCO40_RS07175;product=SLC13 family permease;protein_id=WP_001012856.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1520446 1521045 . - . ID=gene-CCO40_RS07180;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=CCO40_RS07180;old_locus_tag=CCO40_07180 NZ_CP075116.1 Protein Homology CDS 1520446 1521045 . - 0 ID=cds-WP_000813882.1;Parent=gene-CCO40_RS07180;Dbxref=GenBank:WP_000813882.1;Name=WP_000813882.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=CCO40_RS07180;product=5'-deoxynucleotidase;protein_id=WP_000813882.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1521139 1522353 . - . ID=gene-CCO40_RS07185;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=CCO40_RS07185;old_locus_tag=CCO40_07185 NZ_CP075116.1 Protein Homology CDS 1521139 1522353 . - 0 ID=cds-WP_000074540.1;Parent=gene-CCO40_RS07185;Dbxref=GenBank:WP_000074540.1;Name=WP_000074540.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=CCO40_RS07185;product=alanine transaminase AlaA;protein_id=WP_000074540.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1523286 1524224 . + . ID=gene-CCO40_RS07190;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=CCO40_RS07190;old_locus_tag=CCO40_07190 NZ_CP075116.1 Protein Homology CDS 1523286 1524224 . + 0 ID=cds-WP_000606288.1;Parent=gene-CCO40_RS07190;Dbxref=GenBank:WP_000606288.1;Name=WP_000606288.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461272.1;locus_tag=CCO40_RS07190;product=transcriptional regulator LrhA;protein_id=WP_000606288.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1524304 1524456 . + . ID=gene-CCO40_RS07195;Name=CCO40_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07195;old_locus_tag=CCO40_07195 NZ_CP075116.1 Protein Homology CDS 1524304 1524456 . + 0 ID=cds-WP_001650173.1;Parent=gene-CCO40_RS07195;Dbxref=GenBank:WP_001650173.1;Name=WP_001650173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=CCO40_RS07195;product=STM2329 family putative cytoplasmic protein;protein_id=WP_001650173.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1524851 1525294 . + . ID=gene-CCO40_RS07200;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=CCO40_RS07200;old_locus_tag=CCO40_07200 NZ_CP075116.1 Protein Homology CDS 1524851 1525294 . + 0 ID=cds-WP_045718076.1;Parent=gene-CCO40_RS07200;Dbxref=GenBank:WP_045718076.1;Name=WP_045718076.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461270.1;locus_tag=CCO40_RS07200;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_045718076.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1525310 1525972 . + . ID=gene-CCO40_RS07205;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=CCO40_RS07205;old_locus_tag=CCO40_07205 NZ_CP075116.1 Protein Homology CDS 1525310 1525972 . + 0 ID=cds-WP_000386728.1;Parent=gene-CCO40_RS07205;Dbxref=GenBank:WP_000386728.1;Name=WP_000386728.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461269.1;locus_tag=CCO40_RS07205;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386728.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1526059 1527861 . + . ID=gene-CCO40_RS07210;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=CCO40_RS07210;old_locus_tag=CCO40_07210 NZ_CP075116.1 Protein Homology CDS 1526059 1527861 . + 0 ID=cds-WP_000247855.1;Parent=gene-CCO40_RS07210;Dbxref=GenBank:WP_000247855.1;Name=WP_000247855.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461268.1;locus_tag=CCO40_RS07210;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_000247855.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1527864 1528364 . + . ID=gene-CCO40_RS07215;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=CCO40_RS07215;old_locus_tag=CCO40_07215 NZ_CP075116.1 Protein Homology CDS 1527864 1528364 . + 0 ID=cds-WP_000545038.1;Parent=gene-CCO40_RS07215;Dbxref=GenBank:WP_000545038.1;Name=WP_000545038.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461267.1;locus_tag=CCO40_RS07215;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_000545038.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1528361 1529698 . + . ID=gene-CCO40_RS07220;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=CCO40_RS07220;old_locus_tag=CCO40_07220 NZ_CP075116.1 Protein Homology CDS 1528361 1529698 . + 0 ID=cds-WP_000800048.1;Parent=gene-CCO40_RS07220;Dbxref=GenBank:WP_000800048.1;Name=WP_000800048.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=CCO40_RS07220;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_000800048.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1529729 1532455 . + . ID=gene-CCO40_RS07225;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=CCO40_RS07225;old_locus_tag=CCO40_07225 NZ_CP075116.1 Protein Homology CDS 1529729 1532455 . + 0 ID=cds-WP_045718078.1;Parent=gene-CCO40_RS07225;Dbxref=GenBank:WP_045718078.1;Name=WP_045718078.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=CCO40_RS07225;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_045718078.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1532452 1533429 . + . ID=gene-CCO40_RS07230;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=CCO40_RS07230;old_locus_tag=CCO40_07230 NZ_CP075116.1 Protein Homology CDS 1532452 1533429 . + 0 ID=cds-WP_000118515.1;Parent=gene-CCO40_RS07230;Dbxref=GenBank:WP_000118515.1;Name=WP_000118515.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=CCO40_RS07230;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_000118515.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1533444 1533986 . + . ID=gene-CCO40_RS07235;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=CCO40_RS07235;old_locus_tag=CCO40_07235 NZ_CP075116.1 Protein Homology CDS 1533444 1533986 . + 0 ID=cds-WP_000172747.1;Parent=gene-CCO40_RS07235;Dbxref=GenBank:WP_000172747.1;Name=WP_000172747.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=CCO40_RS07235;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172747.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1533997 1534551 . + . ID=gene-CCO40_RS07240;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=CCO40_RS07240;old_locus_tag=CCO40_07240 NZ_CP075116.1 Protein Homology CDS 1533997 1534551 . + 0 ID=cds-WP_000393522.1;Parent=gene-CCO40_RS07240;Dbxref=GenBank:WP_000393522.1;Name=WP_000393522.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461262.1;locus_tag=CCO40_RS07240;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_000393522.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1534548 1534850 . + . ID=gene-CCO40_RS07245;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=CCO40_RS07245;old_locus_tag=CCO40_07245 NZ_CP075116.1 Protein Homology CDS 1534548 1534850 . + 0 ID=cds-WP_000612687.1;Parent=gene-CCO40_RS07245;Dbxref=GenBank:WP_000612687.1;Name=WP_000612687.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=CCO40_RS07245;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612687.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1534847 1536688 . + . ID=gene-CCO40_RS07250;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=CCO40_RS07250;old_locus_tag=CCO40_07250 NZ_CP075116.1 Protein Homology CDS 1534847 1536688 . + 0 ID=cds-WP_001056577.1;Parent=gene-CCO40_RS07250;Dbxref=GenBank:WP_001056577.1;Name=WP_001056577.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=CCO40_RS07250;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_001056577.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1536765 1538294 . + . ID=gene-CCO40_RS07255;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=CCO40_RS07255;old_locus_tag=CCO40_07255 NZ_CP075116.1 Protein Homology CDS 1536765 1538294 . + 0 ID=cds-WP_000926431.1;Parent=gene-CCO40_RS07255;Dbxref=GenBank:WP_000926431.1;Name=WP_000926431.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=CCO40_RS07255;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_000926431.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1538301 1539758 . + . ID=gene-CCO40_RS07260;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=CCO40_RS07260;old_locus_tag=CCO40_07260 NZ_CP075116.1 Protein Homology CDS 1538301 1539758 . + 0 ID=cds-WP_000156669.1;Parent=gene-CCO40_RS07260;Dbxref=GenBank:WP_000156669.1;Name=WP_000156669.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=CCO40_RS07260;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_000156669.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1539897 1540901 . - . ID=gene-CCO40_RS07265;Name=CCO40_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07265;old_locus_tag=CCO40_07265 NZ_CP075116.1 Protein Homology CDS 1539897 1540901 . - 0 ID=cds-WP_000368563.1;Parent=gene-CCO40_RS07265;Dbxref=GenBank:WP_000368563.1;Name=WP_000368563.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131502.1;locus_tag=CCO40_RS07265;product=chemotaxis protein;protein_id=WP_000368563.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1540967 1541884 . - . ID=gene-CCO40_RS07270;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=CCO40_RS07270;old_locus_tag=CCO40_07270 NZ_CP075116.1 Protein Homology CDS 1540967 1541884 . - 0 ID=cds-WP_000419093.1;Parent=gene-CCO40_RS07270;Dbxref=GenBank:WP_000419093.1;Name=WP_000419093.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461255.1;locus_tag=CCO40_RS07270;product=ribonuclease BN;protein_id=WP_000419093.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1541945 1542406 . + . ID=gene-CCO40_RS07275;Name=CCO40_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07275;old_locus_tag=CCO40_07275 NZ_CP075116.1 Protein Homology CDS 1541945 1542406 . + 0 ID=cds-WP_000568158.1;Parent=gene-CCO40_RS07275;Dbxref=GenBank:WP_000568158.1;Name=WP_000568158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461254.1;locus_tag=CCO40_RS07275;product=GNAT family N-acetyltransferase;protein_id=WP_000568158.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1542461 1542766 . + . ID=gene-CCO40_RS07280;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=CCO40_RS07280;old_locus_tag=CCO40_07280 NZ_CP075116.1 Protein Homology CDS 1542461 1542766 . + 0 ID=cds-WP_001519663.1;Parent=gene-CCO40_RS07280;Dbxref=GenBank:WP_001519663.1;Name=WP_001519663.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=CCO40_RS07280;product=stress response protein ElaB;protein_id=WP_001519663.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1542867 1544162 . + . ID=gene-CCO40_RS07285;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=CCO40_RS07285;old_locus_tag=CCO40_07285 NZ_CP075116.1 Protein Homology CDS 1542867 1544162 . + 0 ID=cds-WP_000555674.1;Parent=gene-CCO40_RS07285;Dbxref=GenBank:WP_000555674.1;Name=WP_000555674.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461252.1;locus_tag=CCO40_RS07285;product=isochorismate synthase MenF;protein_id=WP_000555674.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1544248 1545918 . + . ID=gene-CCO40_RS07290;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=CCO40_RS07290;old_locus_tag=CCO40_07290 NZ_CP075116.1 Protein Homology CDS 1544248 1545918 . + 0 ID=cds-WP_000116381.1;Parent=gene-CCO40_RS07290;Dbxref=GenBank:WP_000116381.1;Name=WP_000116381.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461251.1;locus_tag=CCO40_RS07290;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_000116381.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1545915 1546673 . + . ID=gene-CCO40_RS07295;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=CCO40_RS07295;old_locus_tag=CCO40_07295 NZ_CP075116.1 Protein Homology CDS 1545915 1546673 . + 0 ID=cds-WP_000979144.1;Parent=gene-CCO40_RS07295;Dbxref=GenBank:WP_000979144.1;Name=WP_000979144.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=CCO40_RS07295;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_000979144.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1546688 1547545 . + . ID=gene-CCO40_RS07300;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=CCO40_RS07300;old_locus_tag=CCO40_07300 NZ_CP075116.1 Protein Homology CDS 1546688 1547545 . + 0 ID=cds-WP_000640013.1;Parent=gene-CCO40_RS07300;Dbxref=GenBank:WP_000640013.1;Name=WP_000640013.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=CCO40_RS07300;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000640013.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1547545 1548507 . + . ID=gene-CCO40_RS07305;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=CCO40_RS07305;old_locus_tag=CCO40_07305 NZ_CP075116.1 Protein Homology CDS 1547545 1548507 . + 0 ID=cds-WP_001255568.1;Parent=gene-CCO40_RS07305;Dbxref=GenBank:WP_001255568.1;Name=WP_001255568.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461248.1;locus_tag=CCO40_RS07305;product=o-succinylbenzoate synthase;protein_id=WP_001255568.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1548504 1549871 . + . ID=gene-CCO40_RS07310;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=CCO40_RS07310;old_locus_tag=CCO40_07310 NZ_CP075116.1 Protein Homology CDS 1548504 1549871 . + 0 ID=cds-WP_000144669.1;Parent=gene-CCO40_RS07310;Dbxref=GenBank:WP_000144669.1;Name=WP_000144669.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461247.1;locus_tag=CCO40_RS07310;product=o-succinylbenzoate--CoA ligase;protein_id=WP_000144669.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1549969 1550226 . + . ID=gene-CCO40_RS07315;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=CCO40_RS07315;old_locus_tag=CCO40_07315 NZ_CP075116.1 Protein Homology CDS 1549969 1550226 . + 0 ID=cds-WP_000455132.1;Parent=gene-CCO40_RS07315;Dbxref=GenBank:WP_000455132.1;Name=WP_000455132.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461246.1;locus_tag=CCO40_RS07315;product=signal transduction protein PmrD;protein_id=WP_000455132.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1550221 1550598 . - . ID=gene-CCO40_RS07320;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=CCO40_RS07320;old_locus_tag=CCO40_07320 NZ_CP075116.1 Protein Homology CDS 1550221 1550598 . - 0 ID=cds-WP_000538696.1;Parent=gene-CCO40_RS07320;Dbxref=GenBank:WP_000538696.1;Name=WP_000538696.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=CCO40_RS07320;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000538696.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1550598 1550933 . - . ID=gene-CCO40_RS07325;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=CCO40_RS07325;old_locus_tag=CCO40_07325 NZ_CP075116.1 Protein Homology CDS 1550598 1550933 . - 0 ID=cds-WP_000579484.1;Parent=gene-CCO40_RS07325;Dbxref=GenBank:WP_000579484.1;Name=WP_000579484.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461244.1;locus_tag=CCO40_RS07325;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000579484.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1550930 1552576 . - . ID=gene-CCO40_RS07330;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=CCO40_RS07330;old_locus_tag=CCO40_07330 NZ_CP075116.1 Protein Homology CDS 1550930 1552576 . - 0 ID=cds-WP_000978041.1;Parent=gene-CCO40_RS07330;Dbxref=GenBank:WP_000978041.1;Name=WP_000978041.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461243.1;locus_tag=CCO40_RS07330;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_000978041.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1552573 1553472 . - . ID=gene-CCO40_RS07335;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=CCO40_RS07335;old_locus_tag=CCO40_07335 NZ_CP075116.1 Protein Homology CDS 1552573 1553472 . - 0 ID=cds-WP_000169764.1;Parent=gene-CCO40_RS07335;Dbxref=GenBank:WP_000169764.1;Name=WP_000169764.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461242.1;locus_tag=CCO40_RS07335;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_000169764.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1553469 1555451 . - . ID=gene-CCO40_RS07340;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=CCO40_RS07340;old_locus_tag=CCO40_07340 NZ_CP075116.1 Protein Homology CDS 1553469 1555451 . - 0 ID=cds-WP_094889246.1;Parent=gene-CCO40_RS07340;Dbxref=GenBank:WP_094889246.1;Name=WP_094889246.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461241.1;locus_tag=CCO40_RS07340;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_094889246.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1555448 1556431 . - . ID=gene-CCO40_RS07345;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=CCO40_RS07345;old_locus_tag=CCO40_07345 NZ_CP075116.1 Protein Homology CDS 1555448 1556431 . - 0 ID=cds-WP_000458893.1;Parent=gene-CCO40_RS07345;Dbxref=GenBank:WP_000458893.1;Name=WP_000458893.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461240.1;locus_tag=CCO40_RS07345;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_000458893.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1556434 1557573 . - . ID=gene-CCO40_RS07350;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=CCO40_RS07350;old_locus_tag=CCO40_07350 NZ_CP075116.1 Protein Homology CDS 1556434 1557573 . - 0 ID=cds-WP_001279284.1;Parent=gene-CCO40_RS07350;Dbxref=GenBank:WP_001279284.1;Name=WP_001279284.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=CCO40_RS07350;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_001279284.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1557872 1558477 . + . ID=gene-CCO40_RS07355;Name=pmrG;gbkey=Gene;gene=pmrG;gene_biotype=protein_coding;locus_tag=CCO40_RS07355;old_locus_tag=CCO40_07355 NZ_CP075116.1 Protein Homology CDS 1557872 1558477 . + 0 ID=cds-WP_000879258.1;Parent=gene-CCO40_RS07355;Dbxref=GenBank:WP_000879258.1;Name=WP_000879258.1;gbkey=CDS;gene=pmrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=CCO40_RS07355;product=lipopolysaccharide core heptose(II)-phosphate phosphatase PmrG;protein_id=WP_000879258.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1558522 1558947 . - . ID=gene-CCO40_RS07360;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=CCO40_RS07360;old_locus_tag=CCO40_07360 NZ_CP075116.1 Protein Homology CDS 1558522 1558947 . - 0 ID=cds-WP_001249906.1;Parent=gene-CCO40_RS07360;Dbxref=GenBank:WP_001249906.1;Name=WP_001249906.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461237.1;locus_tag=CCO40_RS07360;product=nucleoside triphosphatase NudI;protein_id=WP_001249906.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1559226 1559768 . + . ID=gene-CCO40_RS07365;Name=CCO40_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07365;old_locus_tag=CCO40_07365 NZ_CP075116.1 Protein Homology CDS 1559226 1559768 . + 0 ID=cds-WP_001670658.1;Parent=gene-CCO40_RS07365;Dbxref=GenBank:WP_001670658.1;Name=WP_001670658.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311165.2;locus_tag=CCO40_RS07365;product=YfaZ family protein;protein_id=WP_001670658.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1559883 1561079 . + . ID=gene-CCO40_RS07370;Name=CCO40_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07370;old_locus_tag=CCO40_07370 NZ_CP075116.1 Protein Homology CDS 1559883 1561079 . + 0 ID=cds-WP_000935683.1;Parent=gene-CCO40_RS07370;Dbxref=GenBank:WP_000935683.1;Name=WP_000935683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461235.1;locus_tag=CCO40_RS07370;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_000935683.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1561329 1562111 . + . ID=gene-CCO40_RS07375;Name=CCO40_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07375;old_locus_tag=CCO40_07375 NZ_CP075116.1 Protein Homology CDS 1561329 1562111 . + 0 ID=cds-WP_000894170.1;Parent=gene-CCO40_RS07375;Dbxref=GenBank:WP_000894170.1;Name=WP_000894170.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461234.1;locus_tag=CCO40_RS07375;product=IclR family transcriptional regulator;protein_id=WP_000894170.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1562125 1563330 . + . ID=gene-CCO40_RS07380;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=CCO40_RS07380;old_locus_tag=CCO40_07380 NZ_CP075116.1 Protein Homology CDS 1562125 1563330 . + 0 ID=cds-WP_001531757.1;Parent=gene-CCO40_RS07380;Dbxref=GenBank:WP_001531757.1;Name=WP_001531757.1;Ontology_term=GO:0050032;gbkey=CDS;gene=rhmD;go_function=L-rhamnonate dehydratase activity|0050032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=CCO40_RS07380;product=L-rhamnonate dehydratase;protein_id=WP_001531757.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1563386 1564675 . + . ID=gene-CCO40_RS07385;Name=CCO40_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07385;old_locus_tag=CCO40_07385 NZ_CP075116.1 Protein Homology CDS 1563386 1564675 . + 0 ID=cds-WP_000028932.1;Parent=gene-CCO40_RS07385;Dbxref=GenBank:WP_000028932.1;Name=WP_000028932.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461232.1;locus_tag=CCO40_RS07385;product=MFS transporter;protein_id=WP_000028932.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1564701 1565504 . + . ID=gene-CCO40_RS07390;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=CCO40_RS07390;old_locus_tag=CCO40_07390 NZ_CP075116.1 Protein Homology CDS 1564701 1565504 . + 0 ID=cds-WP_000992943.1;Parent=gene-CCO40_RS07390;Dbxref=GenBank:WP_000992943.1;Name=WP_000992943.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461231.1;locus_tag=CCO40_RS07390;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WP_000992943.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1565510 1565686 . + . ID=gene-CCO40_RS07395;Name=CCO40_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07395;old_locus_tag=CCO40_07395 NZ_CP075116.1 Protein Homology CDS 1565510 1565686 . + 0 ID=cds-WP_001112763.1;Parent=gene-CCO40_RS07395;Dbxref=GenBank:WP_001112763.1;Name=WP_001112763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461230.1;locus_tag=CCO40_RS07395;product=hypothetical protein;protein_id=WP_001112763.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1565796 1566818 . - . ID=gene-CCO40_RS07400;Name=sseL;gbkey=Gene;gene=sseL;gene_biotype=protein_coding;locus_tag=CCO40_RS07400;old_locus_tag=CCO40_07400 NZ_CP075116.1 Protein Homology CDS 1565796 1566818 . - 0 ID=cds-WP_094889247.1;Parent=gene-CCO40_RS07400;Dbxref=GenBank:WP_094889247.1;Name=WP_094889247.1;gbkey=CDS;gene=sseL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017721.1;locus_tag=CCO40_RS07400;product=SPI-2 type III secretion system effector deubiquitinase SseL;protein_id=WP_094889247.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1567244 1568434 . - . ID=gene-CCO40_RS07405;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=CCO40_RS07405;old_locus_tag=CCO40_07405 NZ_CP075116.1 Protein Homology CDS 1567244 1568434 . - 0 ID=cds-WP_001285726.1;Parent=gene-CCO40_RS07405;Dbxref=GenBank:WP_001285726.1;Name=WP_001285726.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461228.1;locus_tag=CCO40_RS07405;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_001285726.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1568431 1569690 . - . ID=gene-CCO40_RS07410;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=CCO40_RS07410;old_locus_tag=CCO40_07410 NZ_CP075116.1 Protein Homology CDS 1568431 1569690 . - 0 ID=cds-WP_000667152.1;Parent=gene-CCO40_RS07410;Dbxref=GenBank:WP_000667152.1;Name=WP_000667152.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461227.1;locus_tag=CCO40_RS07410;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_000667152.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1569680 1571308 . - . ID=gene-CCO40_RS07415;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=CCO40_RS07415;old_locus_tag=CCO40_07415 NZ_CP075116.1 Protein Homology CDS 1569680 1571308 . - 0 ID=cds-WP_000857205.1;Parent=gene-CCO40_RS07415;Dbxref=GenBank:WP_000857205.1;Name=WP_000857205.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461226.1;locus_tag=CCO40_RS07415;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_000857205.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1571581 1572939 . + . ID=gene-CCO40_RS07420;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=CCO40_RS07420;old_locus_tag=CCO40_07420 NZ_CP075116.1 Protein Homology CDS 1571581 1572939 . + 0 ID=cds-WP_000948739.1;Parent=gene-CCO40_RS07420;Dbxref=GenBank:WP_000948739.1;Name=WP_000948739.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461225.1;locus_tag=CCO40_RS07420;product=glycerol-3-phosphate transporter;protein_id=WP_000948739.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1572944 1574014 . + . ID=gene-CCO40_RS07425;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=CCO40_RS07425;old_locus_tag=CCO40_07425 NZ_CP075116.1 Protein Homology CDS 1572944 1574014 . + 0 ID=cds-WP_000858952.1;Parent=gene-CCO40_RS07425;Dbxref=GenBank:WP_000858952.1;Name=WP_000858952.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461224.1;locus_tag=CCO40_RS07425;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000858952.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1574130 1575008 . - . ID=gene-CCO40_RS07430;Name=CCO40_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07430;old_locus_tag=CCO40_07430 NZ_CP075116.1 Protein Homology CDS 1574130 1575008 . - 0 ID=cds-WP_000176718.1;Parent=gene-CCO40_RS07430;Dbxref=GenBank:WP_000176718.1;Name=WP_000176718.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=CCO40_RS07430;product=LysR family transcriptional regulator;protein_id=WP_000176718.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1575170 1576360 . + . ID=gene-CCO40_RS07435;Name=CCO40_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07435;old_locus_tag=CCO40_07435 NZ_CP075116.1 Protein Homology CDS 1575170 1576360 . + 0 ID=cds-WP_000660247.1;Parent=gene-CCO40_RS07435;Dbxref=GenBank:WP_000660247.1;Name=WP_000660247.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461222.1;locus_tag=CCO40_RS07435;product=MFS transporter;protein_id=WP_000660247.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1576362 1576616 . - . ID=gene-CCO40_RS07440;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=CCO40_RS07440;old_locus_tag=CCO40_07440 NZ_CP075116.1 Protein Homology CDS 1576362 1576616 . - 0 ID=cds-WP_000533921.1;Parent=gene-CCO40_RS07440;Dbxref=GenBank:WP_000533921.1;Name=WP_000533921.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461221.1;locus_tag=CCO40_RS07440;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000533921.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1576616 1577746 . - . ID=gene-CCO40_RS07445;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=CCO40_RS07445;old_locus_tag=CCO40_07445 NZ_CP075116.1 Protein Homology CDS 1576616 1577746 . - 0 ID=cds-WP_000332026.1;Parent=gene-CCO40_RS07445;Dbxref=GenBank:WP_000332026.1;Name=WP_000332026.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=CCO40_RS07445;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000332026.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1577859 1580144 . - . ID=gene-CCO40_RS07450;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=CCO40_RS07450;old_locus_tag=CCO40_07450 NZ_CP075116.1 Protein Homology CDS 1577859 1580144 . - 0 ID=cds-WP_001076494.1;Parent=gene-CCO40_RS07450;Dbxref=GenBank:WP_001076494.1;Name=WP_001076494.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=CCO40_RS07450;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001076494.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1580500 1581228 . - . ID=gene-CCO40_RS07455;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=CCO40_RS07455;old_locus_tag=CCO40_07455 NZ_CP075116.1 Protein Homology CDS 1580500 1581228 . - 0 ID=cds-WP_001091009.1;Parent=gene-CCO40_RS07455;Dbxref=GenBank:WP_001091009.1;Name=WP_001091009.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=CCO40_RS07455;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_001091009.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1581311 1582195 . - . ID=gene-CCO40_RS07460;Name=CCO40_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07460;old_locus_tag=CCO40_07460 NZ_CP075116.1 Protein Homology CDS 1581311 1582195 . - 0 ID=cds-WP_000944714.1;Parent=gene-CCO40_RS07460;Dbxref=GenBank:WP_000944714.1;Name=WP_000944714.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=CCO40_RS07460;product=GntR family transcriptional regulator;protein_id=WP_000944714.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1582245 1583570 . + . ID=gene-CCO40_RS07465;Name=CCO40_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07465;old_locus_tag=CCO40_07465 NZ_CP075116.1 Protein Homology CDS 1582245 1583570 . + 0 ID=cds-WP_000098082.1;Parent=gene-CCO40_RS07465;Dbxref=GenBank:WP_000098082.1;Name=WP_000098082.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=CCO40_RS07465;product=MFS transporter;protein_id=WP_000098082.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1583585 1584787 . + . ID=gene-CCO40_RS07470;Name=CCO40_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07470;old_locus_tag=CCO40_07470 NZ_CP075116.1 Protein Homology CDS 1583585 1584787 . + 0 ID=cds-WP_000705589.1;Parent=gene-CCO40_RS07470;Dbxref=GenBank:WP_000705589.1;Name=WP_000705589.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=CCO40_RS07470;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_000705589.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1585197 1587833 . + . ID=gene-CCO40_RS07475;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=CCO40_RS07475;old_locus_tag=CCO40_07475 NZ_CP075116.1 Protein Homology CDS 1585197 1587833 . + 0 ID=cds-WP_001281271.1;Parent=gene-CCO40_RS07475;Dbxref=GenBank:WP_001281271.1;Name=WP_001281271.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=CCO40_RS07475;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_001281271.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1587951 1590797 . + . ID=gene-CCO40_RS07480;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=CCO40_RS07480;old_locus_tag=CCO40_07480 NZ_CP075116.1 Protein Homology CDS 1587951 1590797 . + 0 ID=cds-WP_000876078.1;Parent=gene-CCO40_RS07480;Dbxref=GenBank:WP_000876078.1;Name=WP_000876078.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461213.1;locus_tag=CCO40_RS07480;product=two-component system sensor histidine kinase RcsC;protein_id=WP_000876078.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1590900 1591550 . - . ID=gene-CCO40_RS07485;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=CCO40_RS07485;old_locus_tag=CCO40_07485 NZ_CP075116.1 Protein Homology CDS 1590900 1591550 . - 0 ID=cds-WP_001061919.1;Parent=gene-CCO40_RS07485;Dbxref=GenBank:WP_001061919.1;Name=WP_001061919.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461212.1;locus_tag=CCO40_RS07485;product=response regulator transcription factor RcsB;protein_id=WP_001061919.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1591567 1594236 . - . ID=gene-CCO40_RS07490;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=CCO40_RS07490;old_locus_tag=CCO40_07490 NZ_CP075116.1 Protein Homology CDS 1591567 1594236 . - 0 ID=cds-WP_000083205.1;Parent=gene-CCO40_RS07490;Dbxref=GenBank:WP_000083205.1;Name=WP_000083205.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=CCO40_RS07490;product=phosphotransferase RcsD;protein_id=WP_000083205.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1594965 1596101 . + . ID=gene-CCO40_RS07495;Name=CCO40_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07495;old_locus_tag=CCO40_07495 NZ_CP075116.1 Protein Homology CDS 1594965 1596101 . + 0 ID=cds-WP_000865526.1;Parent=gene-CCO40_RS07495;Dbxref=GenBank:WP_000865526.1;Name=WP_000865526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461210.1;locus_tag=CCO40_RS07495;product=porin OmpC;protein_id=WP_000865526.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1596216 1597268 . + . ID=gene-CCO40_RS07500;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=CCO40_RS07500;old_locus_tag=CCO40_07500 NZ_CP075116.1 Protein Homology CDS 1596216 1597268 . + 0 ID=cds-WP_000784314.1;Parent=gene-CCO40_RS07500;Dbxref=GenBank:WP_000784314.1;Name=WP_000784314.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461209.1;locus_tag=CCO40_RS07500;product=FAD:protein FMN transferase ApbE;protein_id=WP_000784314.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1597349 1598410 . + . ID=gene-CCO40_RS07505;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=CCO40_RS07505;old_locus_tag=CCO40_07505 NZ_CP075116.1 Protein Homology CDS 1597349 1598410 . + 0 ID=cds-WP_000975972.1;Parent=gene-CCO40_RS07505;Dbxref=GenBank:WP_000975972.1;Name=WP_000975972.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461208.1;locus_tag=CCO40_RS07505;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_000975972.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1598413 1599063 . + . ID=gene-CCO40_RS07510;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=CCO40_RS07510;old_locus_tag=CCO40_07510 NZ_CP075116.1 Protein Homology CDS 1598413 1599063 . + 0 ID=cds-WP_000884990.1;Parent=gene-CCO40_RS07510;Dbxref=GenBank:WP_000884990.1;Name=WP_000884990.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461207.1;locus_tag=CCO40_RS07510;product=DNA oxidative demethylase AlkB;protein_id=WP_000884990.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1599139 1600782 . + . ID=gene-CCO40_RS07515;Name=CCO40_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07515;old_locus_tag=CCO40_07515 NZ_CP075116.1 Protein Homology CDS 1599139 1600782 . + 0 ID=cds-WP_000421590.1;Parent=gene-CCO40_RS07515;Dbxref=GenBank:WP_000421590.1;Name=WP_000421590.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=CCO40_RS07515;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_000421590.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1600991 1601485 . - . ID=gene-CCO40_RS07520;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=CCO40_RS07520;old_locus_tag=CCO40_07520 NZ_CP075116.1 Protein Homology CDS 1600991 1601485 . - 0 ID=cds-WP_000781589.1;Parent=gene-CCO40_RS07520;Dbxref=GenBank:WP_000781589.1;Name=WP_000781589.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461205.1;locus_tag=CCO40_RS07520;product=serine protease inhibitor ecotin;protein_id=WP_000781589.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1601656 1601787 . - . ID=gene-CCO40_RS22760;Name=yojO;gbkey=Gene;gene=yojO;gene_biotype=protein_coding;locus_tag=CCO40_RS22760 NZ_CP075116.1 Protein Homology CDS 1601656 1601787 . - 0 ID=cds-WP_001526368.1;Parent=gene-CCO40_RS22760;Dbxref=GenBank:WP_001526368.1;Name=WP_001526368.1;gbkey=CDS;gene=yojO;inference=COORDINATES: protein motif:HMM:NF055826.1;locus_tag=CCO40_RS22760;product=protein YojO;protein_id=WP_001526368.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1601899 1602390 . + . ID=gene-CCO40_RS07525;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=CCO40_RS07525;old_locus_tag=CCO40_07525 NZ_CP075116.1 Protein Homology CDS 1601899 1602390 . + 0 ID=cds-WP_000228070.1;Parent=gene-CCO40_RS07525;Dbxref=GenBank:WP_000228070.1;Name=WP_000228070.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461204.1;locus_tag=CCO40_RS07525;product=ferredoxin-type protein NapF;protein_id=WP_000228070.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1602380 1602643 . + . ID=gene-CCO40_RS07530;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=CCO40_RS07530;old_locus_tag=CCO40_07530 NZ_CP075116.1 Protein Homology CDS 1602380 1602643 . + 0 ID=cds-WP_001260058.1;Parent=gene-CCO40_RS07530;Dbxref=GenBank:WP_001260058.1;Name=WP_001260058.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461203.1;locus_tag=CCO40_RS07530;product=chaperone NapD;protein_id=WP_001260058.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1602640 1605126 . + . ID=gene-CCO40_RS07535;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=CCO40_RS07535;old_locus_tag=CCO40_07535 NZ_CP075116.1 Protein Homology CDS 1602640 1605126 . + 0 ID=cds-WP_000778097.1;Parent=gene-CCO40_RS07535;Dbxref=GenBank:WP_000778097.1;Name=WP_000778097.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461202.1;locus_tag=CCO40_RS07535;product=nitrate reductase catalytic subunit NapA;protein_id=WP_000778097.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1605133 1605828 . + . ID=gene-CCO40_RS07540;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=CCO40_RS07540;old_locus_tag=CCO40_07540 NZ_CP075116.1 Protein Homology CDS 1605133 1605828 . + 0 ID=cds-WP_000091676.1;Parent=gene-CCO40_RS07540;Dbxref=GenBank:WP_000091676.1;Name=WP_000091676.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461201.1;locus_tag=CCO40_RS07540;product=ferredoxin-type protein NapG;protein_id=WP_000091676.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1605815 1606684 . + . ID=gene-CCO40_RS07545;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=CCO40_RS07545;old_locus_tag=CCO40_07545 NZ_CP075116.1 Protein Homology CDS 1605815 1606684 . + 0 ID=cds-WP_052932173.1;Parent=gene-CCO40_RS07545;Dbxref=GenBank:WP_052932173.1;Name=WP_052932173.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461200.1;locus_tag=CCO40_RS07545;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_052932173.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1606800 1607249 . + . ID=gene-CCO40_RS07550;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=CCO40_RS07550;old_locus_tag=CCO40_07550 NZ_CP075116.1 Protein Homology CDS 1606800 1607249 . + 0 ID=cds-WP_000835182.1;Parent=gene-CCO40_RS07550;Dbxref=GenBank:WP_000835182.1;Name=WP_000835182.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461199.1;locus_tag=CCO40_RS07550;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835182.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1607259 1607861 . + . ID=gene-CCO40_RS07555;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=CCO40_RS07555;old_locus_tag=CCO40_07555 NZ_CP075116.1 Protein Homology CDS 1607259 1607861 . + 0 ID=cds-WP_000431778.1;Parent=gene-CCO40_RS07555;Dbxref=GenBank:WP_000431778.1;Name=WP_000431778.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461198.1;locus_tag=CCO40_RS07555;product=cytochrome c-type protein NapC;protein_id=WP_000431778.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1607882 1608499 . + . ID=gene-CCO40_RS07560;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=CCO40_RS07560;old_locus_tag=CCO40_07560 NZ_CP075116.1 Protein Homology CDS 1607882 1608499 . + 0 ID=cds-WP_000888542.1;Parent=gene-CCO40_RS07560;Dbxref=GenBank:WP_000888542.1;Name=WP_000888542.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461197.1;locus_tag=CCO40_RS07560;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_000888542.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1608496 1609155 . + . ID=gene-CCO40_RS07565;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=CCO40_RS07565;old_locus_tag=CCO40_07565 NZ_CP075116.1 Protein Homology CDS 1608496 1609155 . + 0 ID=cds-WP_000990032.1;Parent=gene-CCO40_RS07565;Dbxref=GenBank:WP_000990032.1;Name=WP_000990032.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=CCO40_RS07565;product=heme exporter protein CcmB;protein_id=WP_000990032.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1609207 1609944 . + . ID=gene-CCO40_RS07570;Name=CCO40_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07570;old_locus_tag=CCO40_07570 NZ_CP075116.1 Protein Homology CDS 1609207 1609944 . + 0 ID=cds-WP_000265997.1;Parent=gene-CCO40_RS07570;Dbxref=GenBank:WP_000265997.1;Name=WP_000265997.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=CCO40_RS07570;product=heme ABC transporter permease;protein_id=WP_000265997.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1609941 1610153 . + . ID=gene-CCO40_RS07575;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=CCO40_RS07575;old_locus_tag=CCO40_07575 NZ_CP075116.1 Protein Homology CDS 1609941 1610153 . + 0 ID=cds-WP_000074110.1-2;Parent=gene-CCO40_RS07575;Dbxref=GenBank:WP_000074110.1;Name=WP_000074110.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461194.1;locus_tag=CCO40_RS07575;product=heme exporter protein CcmD;protein_id=WP_000074110.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1610150 1610629 . + . ID=gene-CCO40_RS07580;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=CCO40_RS07580;old_locus_tag=CCO40_07580 NZ_CP075116.1 Protein Homology CDS 1610150 1610629 . + 0 ID=cds-WP_001053618.1;Parent=gene-CCO40_RS07580;Dbxref=GenBank:WP_001053618.1;Name=WP_001053618.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=CCO40_RS07580;product=cytochrome c maturation protein CcmE;protein_id=WP_001053618.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1610626 1612557 . + . ID=gene-CCO40_RS07585;Name=CCO40_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07585;old_locus_tag=CCO40_07585 NZ_CP075116.1 Protein Homology CDS 1610626 1612557 . + 0 ID=cds-WP_023137699.1;Parent=gene-CCO40_RS07585;Dbxref=GenBank:WP_023137699.1;Name=WP_023137699.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=CCO40_RS07585;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_023137699.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1612554 1613111 . + . ID=gene-CCO40_RS07590;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=CCO40_RS07590;old_locus_tag=CCO40_07590 NZ_CP075116.1 Protein Homology CDS 1612554 1613111 . + 0 ID=cds-WP_000828293.1;Parent=gene-CCO40_RS07590;Dbxref=GenBank:WP_000828293.1;Name=WP_000828293.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=CCO40_RS07590;product=thiol:disulfide interchange protein DsbE;protein_id=WP_000828293.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1613108 1614151 . + . ID=gene-CCO40_RS07595;Name=CCO40_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07595;old_locus_tag=CCO40_07595 NZ_CP075116.1 Protein Homology CDS 1613108 1614151 . + 0 ID=cds-WP_053521161.1;Parent=gene-CCO40_RS07595;Dbxref=GenBank:WP_053521161.1;Name=WP_053521161.1;Ontology_term=GO:0017004,GO:0015035,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=protein-disulfide reductase activity|0015035||IEA,metal ion binding|0046872||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=CCO40_RS07595;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_053521161.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1614195 1614842 . - . ID=gene-CCO40_RS07600;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=CCO40_RS07600;old_locus_tag=CCO40_07600 NZ_CP075116.1 Protein Homology CDS 1614195 1614842 . - 0 ID=cds-WP_001115500.1;Parent=gene-CCO40_RS07600;Dbxref=GenBank:WP_001115500.1;Name=WP_001115500.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461189.1;locus_tag=CCO40_RS07600;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001115500.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1615660 1616223 . + . ID=gene-CCO40_RS07605;Name=pagL;gbkey=Gene;gene=pagL;gene_biotype=protein_coding;locus_tag=CCO40_RS07605;old_locus_tag=CCO40_07605 NZ_CP075116.1 Protein Homology CDS 1615660 1616223 . + 0 ID=cds-WP_094889190.1;Parent=gene-CCO40_RS07605;Dbxref=GenBank:WP_094889190.1;Name=WP_094889190.1;gbkey=CDS;gene=pagL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461188.1;locus_tag=CCO40_RS07605;product=lipid A 3-O-deacylase PagL;protein_id=WP_094889190.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1616416 1616604 . - . ID=gene-CCO40_RS07610;Name=CCO40_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07610;old_locus_tag=CCO40_07610 NZ_CP075116.1 Protein Homology CDS 1616416 1616604 . - 0 ID=cds-WP_001727474.1;Parent=gene-CCO40_RS07610;Dbxref=GenBank:WP_001727474.1;Name=WP_001727474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461187.1;locus_tag=CCO40_RS07610;product=DinI-like family protein;protein_id=WP_001727474.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1616751 1617410 . + . ID=gene-CCO40_RS22665;Name=CCO40_RS22665;end_range=1617410,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22665;partial=true;pseudo=true;start_range=.,1616751 NZ_CP075116.1 Protein Homology CDS 1616751 1617410 . + 0 ID=cds-CCO40_RS22665;Parent=gene-CCO40_RS22665;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1617410,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001144672.1;locus_tag=CCO40_RS22665;partial=true;product=phage tail protein;pseudo=true;start_range=.,1616751;transl_table=11 NZ_CP075116.1 RefSeq gene 1618367 1620733 . + . ID=gene-CCO40_RS07625;Name=sspH2;gbkey=Gene;gene=sspH2;gene_biotype=protein_coding;locus_tag=CCO40_RS07625;old_locus_tag=CCO40_07625 NZ_CP075116.1 Protein Homology CDS 1618367 1620733 . + 0 ID=cds-WP_001115840.1;Parent=gene-CCO40_RS07625;Dbxref=GenBank:WP_001115840.1;Name=WP_001115840.1;gbkey=CDS;gene=sspH2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461184.1;locus_tag=CCO40_RS07625;product=SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2;protein_id=WP_001115840.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1620818 1621054 . + . ID=gene-CCO40_RS07630;Name=CCO40_RS07630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS07630;old_locus_tag=CCO40_07630;partial=true;pseudo=true;start_range=.,1620818 NZ_CP075116.1 Protein Homology CDS 1620818 1621054 . + 0 ID=cds-CCO40_RS07630;Parent=gene-CCO40_RS07630;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061418.1;locus_tag=CCO40_RS07630;partial=true;product=KilA-N domain-containing protein;pseudo=true;start_range=.,1620818;transl_table=11 NZ_CP075116.1 RefSeq gene 1621062 1622051 . + . ID=gene-CCO40_RS07635;Name=CCO40_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07635;old_locus_tag=CCO40_07635 NZ_CP075116.1 Protein Homology CDS 1621062 1622051 . + 0 ID=cds-WP_001202279.1;Parent=gene-CCO40_RS07635;Dbxref=GenBank:WP_001202279.1;Name=WP_001202279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461183.1;locus_tag=CCO40_RS07635;product=DUF968 domain-containing protein;protein_id=WP_001202279.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1622066 1622434 . + . ID=gene-CCO40_RS07640;Name=CCO40_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07640;old_locus_tag=CCO40_07640 NZ_CP075116.1 Protein Homology CDS 1622066 1622434 . + 0 ID=cds-WP_010989045.1;Parent=gene-CCO40_RS07640;Dbxref=GenBank:WP_010989045.1;Name=WP_010989045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461182.1;locus_tag=CCO40_RS07640;product=antiterminator Q family protein;protein_id=WP_010989045.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1622463 1623794 . - . ID=gene-CCO40_RS07645;Name=CCO40_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07645;old_locus_tag=CCO40_07645 NZ_CP075116.1 Protein Homology CDS 1622463 1623794 . - 0 ID=cds-WP_000894638.1;Parent=gene-CCO40_RS07645;Dbxref=GenBank:WP_000894638.1;Name=WP_000894638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461181.1;locus_tag=CCO40_RS07645;product=KAP family NTPase;protein_id=WP_000894638.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1624091 1624420 . + . ID=gene-CCO40_RS07650;Name=CCO40_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07650;old_locus_tag=CCO40_07650 NZ_CP075116.1 Protein Homology CDS 1624091 1624420 . + 0 ID=cds-WP_001120499.1;Parent=gene-CCO40_RS07650;Dbxref=GenBank:WP_001120499.1;Name=WP_001120499.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461180.1;locus_tag=CCO40_RS07650;product=phage holin%2C lambda family;protein_id=WP_001120499.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1624434 1624907 . + . ID=gene-CCO40_RS07655;Name=CCO40_RS07655;end_range=1624907,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS07655;old_locus_tag=CCO40_07655;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 1624434 1624907 . + 0 ID=cds-CCO40_RS07655;Parent=gene-CCO40_RS07655;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019068,GO:0019082,GO:0005198,GO:0008233;end_range=1624907,.;gbkey=CDS;go_function=structural molecule activity|0005198||IEA,peptidase activity|0008233||IEA;go_process=virion assembly|0019068||IEA,viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999805.1;locus_tag=CCO40_RS07655;partial=true;product=HK97 family phage prohead protease;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1624883 1625026 . + . ID=gene-CCO40_RS07660;Name=CCO40_RS07660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS07660;old_locus_tag=CCO40_07660;partial=true;pseudo=true;start_range=.,1624883 NZ_CP075116.1 Protein Homology CDS 1624883 1625026 . + 0 ID=cds-CCO40_RS07660;Parent=gene-CCO40_RS07660;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001207831.1;locus_tag=CCO40_RS07660;partial=true;product=phage tail protein;pseudo=true;start_range=.,1624883;transl_table=11 NZ_CP075116.1 RefSeq gene 1625013 1626254 . + . ID=gene-CCO40_RS07665;Name=CCO40_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07665;old_locus_tag=CCO40_07665 NZ_CP075116.1 Protein Homology CDS 1625013 1626254 . + 0 ID=cds-WP_000554739.1;Parent=gene-CCO40_RS07665;Dbxref=GenBank:WP_000554739.1;Name=WP_000554739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461178.1;locus_tag=CCO40_RS07665;product=hypothetical protein;protein_id=WP_000554739.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1626257 1626784 . + . ID=gene-CCO40_RS07670;Name=CCO40_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07670;old_locus_tag=CCO40_07670 NZ_CP075116.1 Protein Homology CDS 1626257 1626784 . + 0 ID=cds-WP_001215679.1;Parent=gene-CCO40_RS07670;Dbxref=GenBank:WP_001215679.1;Name=WP_001215679.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461177.1;locus_tag=CCO40_RS07670;product=tail fiber assembly protein;protein_id=WP_001215679.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1627162 1627605 . + . ID=gene-CCO40_RS07675;Name=CCO40_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07675;old_locus_tag=CCO40_07675 NZ_CP075116.1 Protein Homology CDS 1627162 1627605 . + 0 ID=cds-WP_000022213.1;Parent=gene-CCO40_RS07675;Dbxref=GenBank:WP_000022213.1;Name=WP_000022213.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461176.1;locus_tag=CCO40_RS07675;product=tail fiber assembly protein;protein_id=WP_000022213.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1627659 1629488 . - . ID=gene-CCO40_RS07680;Name=CCO40_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07680;old_locus_tag=CCO40_07680 NZ_CP075116.1 Protein Homology CDS 1627659 1629488 . - 0 ID=cds-WP_094889188.1;Parent=gene-CCO40_RS07680;Dbxref=GenBank:WP_094889188.1;Name=WP_094889188.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461175.1;locus_tag=CCO40_RS07680;product=acyltransferase family protein;protein_id=WP_094889188.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1629836 1630126 . - . ID=gene-CCO40_RS07685;Name=CCO40_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07685;old_locus_tag=CCO40_07685 NZ_CP075116.1 Protein Homology CDS 1629836 1630126 . - 0 ID=cds-WP_000884778.1;Parent=gene-CCO40_RS07685;Dbxref=GenBank:WP_000884778.1;Name=WP_000884778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461174.1;locus_tag=CCO40_RS07685;product=DinI family protein;protein_id=WP_000884778.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1630040 1630265 . + . ID=gene-CCO40_RS22765;Name=CCO40_RS22765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22765;pseudo=true NZ_CP075116.1 Protein Homology CDS 1630040 1630265 . + 0 ID=cds-CCO40_RS22765;Parent=gene-CCO40_RS22765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003833923.1;locus_tag=CCO40_RS22765;product=DNA polymerase V;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 1630268 1630657 . + . ID=gene-CCO40_RS07690;Name=CCO40_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07690;old_locus_tag=CCO40_07690 NZ_CP075116.1 Protein Homology CDS 1630268 1630657 . + 0 ID=cds-WP_023602540.1;Parent=gene-CCO40_RS07690;Dbxref=GenBank:WP_023602540.1;Name=WP_023602540.1;Ontology_term=GO:0042276;gbkey=CDS;go_process=error-prone translesion synthesis|0042276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156663.1;locus_tag=CCO40_RS07690;product=HumD family translesion DNA polymerase;protein_id=WP_023602540.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1630788 1630864 . - . ID=gene-CCO40_RS07695;Name=CCO40_RS07695;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS07695;old_locus_tag=CCO40_07695 NZ_CP075116.1 tRNAscan-SE tRNA 1630788 1630864 . - . ID=rna-CCO40_RS07695;Parent=gene-CCO40_RS07695;anticodon=(pos:complement(1630828..1630830));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS07695;product=tRNA-Pro NZ_CP075116.1 tRNAscan-SE exon 1630788 1630864 . - . ID=exon-CCO40_RS07695-1;Parent=rna-CCO40_RS07695;anticodon=(pos:complement(1630828..1630830));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS07695;product=tRNA-Pro NZ_CP075116.1 RefSeq gene 1630938 1632698 . - . ID=gene-CCO40_RS07700;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=CCO40_RS07700;old_locus_tag=CCO40_07700 NZ_CP075116.1 Protein Homology CDS 1630938 1632698 . - 0 ID=cds-WP_000256150.1;Parent=gene-CCO40_RS07700;Dbxref=GenBank:WP_000256150.1;Name=WP_000256150.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=CCO40_RS07700;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_000256150.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1632730 1632957 . - . ID=gene-CCO40_RS07705;Name=CCO40_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07705;old_locus_tag=CCO40_07705 NZ_CP075116.1 Protein Homology CDS 1632730 1632957 . - 0 ID=cds-WP_001135904.1;Parent=gene-CCO40_RS07705;Dbxref=GenBank:WP_001135904.1;Name=WP_001135904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461171.1;locus_tag=CCO40_RS07705;product=YejL family protein;protein_id=WP_001135904.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1633137 1634144 . + . ID=gene-CCO40_RS07710;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=CCO40_RS07710;old_locus_tag=CCO40_07710 NZ_CP075116.1 Protein Homology CDS 1633137 1634144 . + 0 ID=cds-WP_000050806.1;Parent=gene-CCO40_RS07710;Dbxref=GenBank:WP_000050806.1;Name=WP_000050806.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461170.1;locus_tag=CCO40_RS07710;product=nucleoid-associated protein YejK;protein_id=WP_000050806.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1634172 1634792 . + . ID=gene-CCO40_RS07715;Name=CCO40_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07715;old_locus_tag=CCO40_07715 NZ_CP075116.1 Protein Homology CDS 1634172 1634792 . + 0 ID=cds-WP_000033443.1;Parent=gene-CCO40_RS07715;Dbxref=GenBank:WP_000033443.1;Name=WP_000033443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461169.1;locus_tag=CCO40_RS07715;product=hypothetical protein;protein_id=WP_000033443.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1634901 1635185 . - . ID=gene-CCO40_RS07720;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=CCO40_RS07720;old_locus_tag=CCO40_07720 NZ_CP075116.1 Protein Homology CDS 1634901 1635185 . - 0 ID=cds-WP_000494192.1;Parent=gene-CCO40_RS07720;Dbxref=GenBank:WP_000494192.1;Name=WP_000494192.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=CCO40_RS07720;product=50S ribosomal protein L25;protein_id=WP_000494192.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1635310 1637070 . - . ID=gene-CCO40_RS07725;Name=radD;gbkey=Gene;gene=radD;gene_biotype=protein_coding;gene_synonym=yejH;locus_tag=CCO40_RS07725;old_locus_tag=CCO40_07725 NZ_CP075116.1 Protein Homology CDS 1635310 1637070 . - 0 ID=cds-WP_000578121.1;Parent=gene-CCO40_RS07725;Dbxref=GenBank:WP_000578121.1;Name=WP_000578121.1;Ontology_term=GO:0006281;gbkey=CDS;gene=radD;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461167.1;locus_tag=CCO40_RS07725;product=DNA repair helicase RadD;protein_id=WP_000578121.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1637222 1637917 . + . ID=gene-CCO40_RS07730;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=CCO40_RS07730;old_locus_tag=CCO40_07730 NZ_CP075116.1 Protein Homology CDS 1637222 1637917 . + 0 ID=cds-WP_001234836.1;Parent=gene-CCO40_RS07730;Dbxref=GenBank:WP_001234836.1;Name=WP_001234836.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461166.1;locus_tag=CCO40_RS07730;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234836.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1637945 1639135 . + . ID=gene-CCO40_RS07735;Name=CCO40_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07735;old_locus_tag=CCO40_07735 NZ_CP075116.1 Protein Homology CDS 1637945 1639135 . + 0 ID=cds-WP_000213349.1;Parent=gene-CCO40_RS07735;Dbxref=GenBank:WP_000213349.1;Name=WP_000213349.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461165.1;locus_tag=CCO40_RS07735;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_000213349.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1639526 1639870 . + . ID=gene-CCO40_RS07740;Name=CCO40_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07740;old_locus_tag=CCO40_07740 NZ_CP075116.1 Protein Homology CDS 1639526 1639870 . + 0 ID=cds-WP_001094639.1;Parent=gene-CCO40_RS07740;Dbxref=GenBank:WP_001094639.1;Name=WP_001094639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461164.1;locus_tag=CCO40_RS07740;product=YejG family protein;protein_id=WP_001094639.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1639874 1641463 . - . ID=gene-CCO40_RS07745;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=CCO40_RS07745;old_locus_tag=CCO40_07745 NZ_CP075116.1 Protein Homology CDS 1639874 1641463 . - 0 ID=cds-WP_000203619.1;Parent=gene-CCO40_RS07745;Dbxref=GenBank:WP_000203619.1;Name=WP_000203619.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461163.1;locus_tag=CCO40_RS07745;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_000203619.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1641465 1642490 . - . ID=gene-CCO40_RS07750;Name=CCO40_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07750;old_locus_tag=CCO40_07750 NZ_CP075116.1 Protein Homology CDS 1641465 1642490 . - 0 ID=cds-WP_001137747.1;Parent=gene-CCO40_RS07750;Dbxref=GenBank:WP_001137747.1;Name=WP_001137747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461162.1;locus_tag=CCO40_RS07750;product=ABC transporter permease;protein_id=WP_001137747.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1642490 1643584 . - . ID=gene-CCO40_RS07755;Name=CCO40_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07755;old_locus_tag=CCO40_07755 NZ_CP075116.1 Protein Homology CDS 1642490 1643584 . - 0 ID=cds-WP_000501623.1;Parent=gene-CCO40_RS07755;Dbxref=GenBank:WP_000501623.1;Name=WP_000501623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461161.1;locus_tag=CCO40_RS07755;product=microcin C ABC transporter permease YejB;protein_id=WP_000501623.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1643594 1645399 . - . ID=gene-CCO40_RS07760;Name=CCO40_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07760;old_locus_tag=CCO40_07760 NZ_CP075116.1 Protein Homology CDS 1643594 1645399 . - 0 ID=cds-WP_000561742.1;Parent=gene-CCO40_RS07760;Dbxref=GenBank:WP_000561742.1;Name=WP_000561742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461160.1;locus_tag=CCO40_RS07760;product=extracellular solute-binding protein;protein_id=WP_000561742.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1645506 1647062 . - . ID=gene-CCO40_RS07765;Name=CCO40_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07765;old_locus_tag=CCO40_07765 NZ_CP075116.1 Protein Homology CDS 1645506 1647062 . - 0 ID=cds-WP_000957755.1;Parent=gene-CCO40_RS07765;Dbxref=GenBank:WP_000957755.1;Name=WP_000957755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=CCO40_RS07765;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000957755.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1647388 1647960 . - . ID=gene-CCO40_RS07770;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=CCO40_RS07770;old_locus_tag=CCO40_07770 NZ_CP075116.1 Protein Homology CDS 1647388 1647960 . - 0 ID=cds-WP_000241015.1;Parent=gene-CCO40_RS07770;Dbxref=GenBank:WP_000241015.1;Name=WP_000241015.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461158.1;locus_tag=CCO40_RS07770;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241015.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1648374 1649093 . - . ID=gene-CCO40_RS07775;Name=CCO40_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07775;old_locus_tag=CCO40_07775 NZ_CP075116.1 Protein Homology CDS 1648374 1649093 . - 0 ID=cds-WP_000178095.1;Parent=gene-CCO40_RS07775;Dbxref=GenBank:WP_000178095.1;Name=WP_000178095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461157.1;locus_tag=CCO40_RS07775;product=phosphatase PAP2 family protein;protein_id=WP_000178095.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1649123 1650109 . - . ID=gene-CCO40_RS07780;Name=CCO40_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07780;old_locus_tag=CCO40_07780 NZ_CP075116.1 Protein Homology CDS 1649123 1650109 . - 0 ID=cds-WP_000169346.1;Parent=gene-CCO40_RS07780;Dbxref=GenBank:WP_000169346.1;Name=WP_000169346.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461156.1;locus_tag=CCO40_RS07780;product=CobW family GTP-binding protein;protein_id=WP_000169346.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1650322 1650894 . - . ID=gene-CCO40_RS07785;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=CCO40_RS07785;old_locus_tag=CCO40_07785 NZ_CP075116.1 Protein Homology CDS 1650322 1650894 . - 0 ID=cds-WP_001136822.1;Parent=gene-CCO40_RS07785;Dbxref=GenBank:WP_001136822.1;Name=WP_001136822.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=CCO40_RS07785;product=elongation factor P-like protein YeiP;protein_id=WP_001136822.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1651217 1651471 . + . ID=gene-CCO40_RS07790;Name=CCO40_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07790;old_locus_tag=CCO40_07790 NZ_CP075116.1 Protein Homology CDS 1651217 1651471 . + 0 ID=cds-WP_001523448.1;Parent=gene-CCO40_RS07790;Dbxref=GenBank:WP_001523448.1;Name=WP_001523448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675765.1;locus_tag=CCO40_RS07790;product=YkgJ family cysteine cluster protein;protein_id=WP_001523448.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1651859 1651981 . + . ID=gene-CCO40_RS07795;Name=CCO40_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07795;old_locus_tag=CCO40_07795 NZ_CP075116.1 Protein Homology CDS 1651859 1651981 . + 0 ID=cds-WP_001519564.1;Parent=gene-CCO40_RS07795;Dbxref=GenBank:WP_001519564.1;Name=WP_001519564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=CCO40_RS07795;product=membrane protein;protein_id=WP_001519564.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1651983 1652648 . + . ID=gene-CCO40_RS07800;Name=CCO40_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07800;old_locus_tag=CCO40_07800 NZ_CP075116.1 Protein Homology CDS 1651983 1652648 . + 0 ID=cds-WP_080176757.1;Parent=gene-CCO40_RS07800;Dbxref=GenBank:WP_080176757.1;Name=WP_080176757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461153.1;locus_tag=CCO40_RS07800;product=GNVR domain-containing protein;protein_id=WP_080176757.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1652713 1653894 . - . ID=gene-CCO40_RS07805;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=CCO40_RS07805;old_locus_tag=CCO40_07805 NZ_CP075116.1 Protein Homology CDS 1652713 1653894 . - 0 ID=cds-WP_000551926.1;Parent=gene-CCO40_RS07805;Dbxref=GenBank:WP_000551926.1;Name=WP_000551926.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461152.1;locus_tag=CCO40_RS07805;product=sugar efflux transporter SetB;protein_id=WP_000551926.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1654264 1655394 . + . ID=gene-CCO40_RS07810;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=CCO40_RS07810;old_locus_tag=CCO40_07810 NZ_CP075116.1 Protein Homology CDS 1654264 1655394 . + 0 ID=cds-WP_000487287.1;Parent=gene-CCO40_RS07810;Dbxref=GenBank:WP_000487287.1;Name=WP_000487287.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=CCO40_RS07810;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_000487287.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1655394 1656332 . + . ID=gene-CCO40_RS07815;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=CCO40_RS07815;old_locus_tag=CCO40_07815 NZ_CP075116.1 Protein Homology CDS 1655394 1656332 . + 0 ID=cds-WP_000091249.1;Parent=gene-CCO40_RS07815;Dbxref=GenBank:WP_000091249.1;Name=WP_000091249.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461150.1;locus_tag=CCO40_RS07815;product=1-phosphofructokinase;protein_id=WP_000091249.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1656349 1658037 . + . ID=gene-CCO40_RS07820;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=CCO40_RS07820;old_locus_tag=CCO40_07820 NZ_CP075116.1 Protein Homology CDS 1656349 1658037 . + 0 ID=cds-WP_000854408.1;Parent=gene-CCO40_RS07820;Dbxref=GenBank:WP_000854408.1;Name=WP_000854408.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=CCO40_RS07820;product=PTS fructose transporter subunit IIBC;protein_id=WP_000854408.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1658102 1658959 . - . ID=gene-CCO40_RS07825;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=CCO40_RS07825;old_locus_tag=CCO40_07825 NZ_CP075116.1 Protein Homology CDS 1658102 1658959 . - 0 ID=cds-WP_023232526.1;Parent=gene-CCO40_RS07825;Dbxref=GenBank:WP_023232526.1;Name=WP_023232526.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461148.1;locus_tag=CCO40_RS07825;product=deoxyribonuclease IV;protein_id=WP_023232526.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1659038 1660087 . - . ID=gene-CCO40_RS07830;Name=CCO40_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07830;old_locus_tag=CCO40_07830 NZ_CP075116.1 Protein Homology CDS 1659038 1660087 . - 0 ID=cds-WP_000137966.1;Parent=gene-CCO40_RS07830;Dbxref=GenBank:WP_000137966.1;Name=WP_000137966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461147.1;locus_tag=CCO40_RS07830;product=YeiH family protein;protein_id=WP_000137966.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1660208 1661071 . + . ID=gene-CCO40_RS07835;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=CCO40_RS07835;old_locus_tag=CCO40_07835 NZ_CP075116.1 Protein Homology CDS 1660208 1661071 . + 0 ID=cds-WP_094889187.1;Parent=gene-CCO40_RS07835;Dbxref=GenBank:WP_094889187.1;Name=WP_094889187.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461146.1;locus_tag=CCO40_RS07835;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_094889187.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1661261 1662730 . + . ID=gene-CCO40_RS07840;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=CCO40_RS07840;old_locus_tag=CCO40_07840 NZ_CP075116.1 Protein Homology CDS 1661261 1662730 . + 0 ID=cds-WP_000534999.1;Parent=gene-CCO40_RS07840;Dbxref=GenBank:WP_000534999.1;Name=WP_000534999.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461145.1;locus_tag=CCO40_RS07840;product=lysine-specific permease;protein_id=WP_000534999.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1663076 1665067 . + . ID=gene-CCO40_RS07845;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=CCO40_RS07845;old_locus_tag=CCO40_07845 NZ_CP075116.1 Protein Homology CDS 1663076 1665067 . + 0 ID=cds-WP_000488254.1;Parent=gene-CCO40_RS07845;Dbxref=GenBank:WP_000488254.1;Name=WP_000488254.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=CCO40_RS07845;product=catecholate siderophore receptor CirA;protein_id=WP_000488254.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1665111 1666433 . - . ID=gene-CCO40_RS07850;Name=CCO40_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07850;old_locus_tag=CCO40_07850 NZ_CP075116.1 Protein Homology CDS 1665111 1666433 . - 0 ID=cds-WP_000023807.1;Parent=gene-CCO40_RS07850;Dbxref=GenBank:WP_000023807.1;Name=WP_000023807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=CCO40_RS07850;product=MFS transporter;protein_id=WP_000023807.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1666466 1667353 . - . ID=gene-CCO40_RS07855;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=CCO40_RS07855;old_locus_tag=CCO40_07855 NZ_CP075116.1 Protein Homology CDS 1666466 1667353 . - 0 ID=cds-WP_094889186.1;Parent=gene-CCO40_RS07855;Dbxref=GenBank:WP_094889186.1;Name=WP_094889186.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461142.1;locus_tag=CCO40_RS07855;product=phosphoserine phosphatase SerB;protein_id=WP_094889186.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1667570 1668937 . + . ID=gene-CCO40_RS07860;Name=CCO40_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07860;old_locus_tag=CCO40_07860 NZ_CP075116.1 Protein Homology CDS 1667570 1668937 . + 0 ID=cds-WP_001518989.1;Parent=gene-CCO40_RS07860;Dbxref=GenBank:WP_001518989.1;Name=WP_001518989.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461141.1;locus_tag=CCO40_RS07860;product=L-serine ammonia-lyase;protein_id=WP_001518989.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1668942 1669331 . + . ID=gene-CCO40_RS07865;Name=CCO40_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07865;old_locus_tag=CCO40_07865 NZ_CP075116.1 Protein Homology CDS 1668942 1669331 . + 0 ID=cds-WP_000876817.1;Parent=gene-CCO40_RS07865;Dbxref=GenBank:WP_000876817.1;Name=WP_000876817.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461140.1;locus_tag=CCO40_RS07865;product=helix-turn-helix domain-containing protein;protein_id=WP_000876817.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1669320 1670177 . - . ID=gene-CCO40_RS07870;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=CCO40_RS07870;old_locus_tag=CCO40_07870 NZ_CP075116.1 Protein Homology CDS 1669320 1670177 . - 0 ID=cds-WP_000425491.1;Parent=gene-CCO40_RS07870;Dbxref=GenBank:WP_000425491.1;Name=WP_000425491.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461139.2;locus_tag=CCO40_RS07870;product=S-formylglutathione hydrolase;protein_id=WP_000425491.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1670507 1671175 . + . ID=gene-CCO40_RS07875;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=CCO40_RS07875;old_locus_tag=CCO40_07875 NZ_CP075116.1 Protein Homology CDS 1670507 1671175 . + 0 ID=cds-WP_001139611.1;Parent=gene-CCO40_RS07875;Dbxref=GenBank:WP_001139611.1;Name=WP_001139611.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461138.1;locus_tag=CCO40_RS07875;product=GTP cyclohydrolase I FolE;protein_id=WP_001139611.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1671190 1672332 . + . ID=gene-CCO40_RS07880;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=CCO40_RS07880;old_locus_tag=CCO40_07880 NZ_CP075116.1 Protein Homology CDS 1671190 1672332 . + 0 ID=cds-WP_094889193.1;Parent=gene-CCO40_RS07880;Dbxref=GenBank:WP_094889193.1;Name=WP_094889193.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461137.1;locus_tag=CCO40_RS07880;product=DUF418 domain-containing protein YeiB;protein_id=WP_094889193.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1672482 1673504 . + . ID=gene-CCO40_RS07885;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=CCO40_RS07885;old_locus_tag=CCO40_07885 NZ_CP075116.1 Protein Homology CDS 1672482 1673504 . + 0 ID=cds-WP_000628634.1;Parent=gene-CCO40_RS07885;Dbxref=GenBank:WP_000628634.1;Name=WP_000628634.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461136.1;locus_tag=CCO40_RS07885;product=HTH-type transcriptional regulator GalS;protein_id=WP_000628634.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1674003 1675001 . + . ID=gene-CCO40_RS07890;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=CCO40_RS07890;old_locus_tag=CCO40_07890 NZ_CP075116.1 Protein Homology CDS 1674003 1675001 . + 0 ID=cds-WP_094889185.1;Parent=gene-CCO40_RS07890;Dbxref=GenBank:WP_094889185.1;Name=WP_094889185.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=CCO40_RS07890;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_094889185.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1675135 1676655 . + . ID=gene-CCO40_RS07895;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=CCO40_RS07895;old_locus_tag=CCO40_07895 NZ_CP075116.1 Protein Homology CDS 1675135 1676655 . + 0 ID=cds-WP_080183625.1;Parent=gene-CCO40_RS07895;Dbxref=GenBank:WP_080183625.1;Name=WP_080183625.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=CCO40_RS07895;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_080183625.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1676671 1677681 . + . ID=gene-CCO40_RS07900;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=CCO40_RS07900;old_locus_tag=CCO40_07900 NZ_CP075116.1 Protein Homology CDS 1676671 1677681 . + 0 ID=cds-WP_001275101.1;Parent=gene-CCO40_RS07900;Dbxref=GenBank:WP_001275101.1;Name=WP_001275101.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=CCO40_RS07900;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_001275101.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1677756 1678991 . - . ID=gene-CCO40_RS07905;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=CCO40_RS07905;old_locus_tag=CCO40_07905 NZ_CP075116.1 Protein Homology CDS 1677756 1678991 . - 0 ID=cds-WP_000956095.1;Parent=gene-CCO40_RS07905;Dbxref=GenBank:WP_000956095.1;Name=WP_000956095.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=CCO40_RS07905;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_000956095.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1678985 1680226 . - . ID=gene-CCO40_RS07910;Name=CCO40_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07910;old_locus_tag=CCO40_07910 NZ_CP075116.1 Protein Homology CDS 1678985 1680226 . - 0 ID=cds-WP_001728840.1;Parent=gene-CCO40_RS07910;Dbxref=GenBank:WP_001728840.1;Name=WP_001728840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461131.1;locus_tag=CCO40_RS07910;product=NAD(P)-dependent oxidoreductase;protein_id=WP_001728840.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1680431 1680676 . - . ID=gene-CCO40_RS07915;Name=CCO40_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07915;old_locus_tag=CCO40_07915 NZ_CP075116.1 Protein Homology CDS 1680431 1680676 . - 0 ID=cds-WP_000605187.1;Parent=gene-CCO40_RS07915;Dbxref=GenBank:WP_000605187.1;Name=WP_000605187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461130.1;locus_tag=CCO40_RS07915;product=DUF2542 family protein;protein_id=WP_000605187.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1680673 1681392 . - . ID=gene-CCO40_RS07920;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=CCO40_RS07920;old_locus_tag=CCO40_07920 NZ_CP075116.1 Protein Homology CDS 1680673 1681392 . - 0 ID=cds-WP_000920081.1;Parent=gene-CCO40_RS07920;Dbxref=GenBank:WP_000920081.1;Name=WP_000920081.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461129.1;locus_tag=CCO40_RS07920;product=outer membrane permeability protein SanA;protein_id=WP_000920081.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1681569 1682453 . - . ID=gene-CCO40_RS07925;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=CCO40_RS07925;old_locus_tag=CCO40_07925 NZ_CP075116.1 Protein Homology CDS 1681569 1682453 . - 0 ID=cds-WP_000553526.1;Parent=gene-CCO40_RS07925;Dbxref=GenBank:WP_000553526.1;Name=WP_000553526.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461128.1;locus_tag=CCO40_RS07925;product=cytidine deaminase;protein_id=WP_000553526.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1682607 1683302 . - . ID=gene-CCO40_RS07930;Name=CCO40_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07930;old_locus_tag=CCO40_07930 NZ_CP075116.1 Protein Homology CDS 1682607 1683302 . - 0 ID=cds-WP_000989296.1;Parent=gene-CCO40_RS07930;Dbxref=GenBank:WP_000989296.1;Name=WP_000989296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461127.1;locus_tag=CCO40_RS07930;product=CidB/LrgB family autolysis modulator;protein_id=WP_000989296.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1683299 1683697 . - . ID=gene-CCO40_RS07935;Name=CCO40_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07935;old_locus_tag=CCO40_07935 NZ_CP075116.1 Protein Homology CDS 1683299 1683697 . - 0 ID=cds-WP_000045719.1;Parent=gene-CCO40_RS07935;Dbxref=GenBank:WP_000045719.1;Name=WP_000045719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461126.1;locus_tag=CCO40_RS07935;product=CidA/LrgA family protein;protein_id=WP_000045719.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1683829 1684737 . - . ID=gene-CCO40_RS07940;Name=CCO40_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07940;old_locus_tag=CCO40_07940 NZ_CP075116.1 Protein Homology CDS 1683829 1684737 . - 0 ID=cds-WP_000024658.1;Parent=gene-CCO40_RS07940;Dbxref=GenBank:WP_000024658.1;Name=WP_000024658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461125.1;locus_tag=CCO40_RS07940;product=LysR substrate-binding domain-containing protein;protein_id=WP_000024658.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1684863 1686221 . + . ID=gene-CCO40_RS07945;Name=mhbT;gbkey=Gene;gene=mhbT;gene_biotype=protein_coding;locus_tag=CCO40_RS07945;old_locus_tag=CCO40_07945 NZ_CP075116.1 Protein Homology CDS 1684863 1686221 . + 0 ID=cds-WP_000194222.1;Parent=gene-CCO40_RS07945;Dbxref=GenBank:WP_000194222.1;Name=WP_000194222.1;gbkey=CDS;gene=mhbT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461124.1;locus_tag=CCO40_RS07945;product=3-hydroxybenzoate transporter MhbT;protein_id=WP_000194222.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1686233 1687270 . + . ID=gene-CCO40_RS07950;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=CCO40_RS07950;old_locus_tag=CCO40_07950 NZ_CP075116.1 Protein Homology CDS 1686233 1687270 . + 0 ID=cds-WP_001289857.1;Parent=gene-CCO40_RS07950;Dbxref=GenBank:WP_001289857.1;Name=WP_001289857.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=CCO40_RS07950;product=gentisate 1%2C2-dioxygenase;protein_id=WP_001289857.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1687286 1687987 . + . ID=gene-CCO40_RS07955;Name=CCO40_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07955;old_locus_tag=CCO40_07955 NZ_CP075116.1 Protein Homology CDS 1687286 1687987 . + 0 ID=cds-WP_000170626.1;Parent=gene-CCO40_RS07955;Dbxref=GenBank:WP_000170626.1;Name=WP_000170626.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461122.1;locus_tag=CCO40_RS07955;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000170626.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1687996 1688640 . + . ID=gene-CCO40_RS07960;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=CCO40_RS07960;old_locus_tag=CCO40_07960 NZ_CP075116.1 Protein Homology CDS 1687996 1688640 . + 0 ID=cds-WP_000781183.1;Parent=gene-CCO40_RS07960;Dbxref=GenBank:WP_000781183.1;Name=WP_000781183.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034,GO:0005737;gbkey=CDS;gene=maiA;go_component=cytoplasm|0005737||IEA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,L-tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=CCO40_RS07960;product=maleylacetoacetate isomerase;protein_id=WP_000781183.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1688655 1689848 . + . ID=gene-CCO40_RS07965;Name=CCO40_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07965;old_locus_tag=CCO40_07965 NZ_CP075116.1 Protein Homology CDS 1688655 1689848 . + 0 ID=cds-WP_045718014.1;Parent=gene-CCO40_RS07965;Dbxref=GenBank:WP_045718014.1;Name=WP_045718014.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=CCO40_RS07965;product=3-hydroxybenzoate 6-monooxygenase;protein_id=WP_045718014.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1689957 1690895 . + . ID=gene-CCO40_RS07970;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=CCO40_RS07970;old_locus_tag=CCO40_07970 NZ_CP075116.1 Protein Homology CDS 1689957 1690895 . + 0 ID=cds-WP_001264837.1;Parent=gene-CCO40_RS07970;Dbxref=GenBank:WP_001264837.1;Name=WP_001264837.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=CCO40_RS07970;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_001264837.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1690953 1691036 . - . ID=gene-CCO40_RS22670;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=CCO40_RS22670;old_locus_tag=CCO40_07975 NZ_CP075116.1 Protein Homology CDS 1690953 1691036 . - 0 ID=cds-WP_000698460.1;Parent=gene-CCO40_RS22670;Dbxref=GenBank:WP_000698460.1;Name=WP_000698460.1;gbkey=CDS;gene=yohP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791249.1;locus_tag=CCO40_RS22670;product=small membrane protein YohP;protein_id=WP_000698460.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1691354 1692790 . + . ID=gene-CCO40_RS07980;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=CCO40_RS07980;old_locus_tag=CCO40_07980 NZ_CP075116.1 Protein Homology CDS 1691354 1692790 . + 0 ID=cds-WP_045718015.1;Parent=gene-CCO40_RS07980;Dbxref=GenBank:WP_045718015.1;Name=WP_045718015.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461117.1;locus_tag=CCO40_RS07980;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_045718015.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1692856 1693617 . + . ID=gene-CCO40_RS07985;Name=CCO40_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07985;old_locus_tag=CCO40_07985 NZ_CP075116.1 Protein Homology CDS 1692856 1693617 . + 0 ID=cds-WP_000169608.1;Parent=gene-CCO40_RS07985;Dbxref=GenBank:WP_000169608.1;Name=WP_000169608.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461116.1;locus_tag=CCO40_RS07985;product=SDR family oxidoreductase;protein_id=WP_000169608.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1693666 1694235 . - . ID=gene-CCO40_RS07990;Name=CCO40_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07990;old_locus_tag=CCO40_07990 NZ_CP075116.1 Protein Homology CDS 1693666 1694235 . - 0 ID=cds-WP_001523476.1;Parent=gene-CCO40_RS07990;Dbxref=GenBank:WP_001523476.1;Name=WP_001523476.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669449.1;locus_tag=CCO40_RS07990;product=DedA family protein;protein_id=WP_001523476.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1694394 1694981 . + . ID=gene-CCO40_RS07995;Name=CCO40_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS07995;old_locus_tag=CCO40_07995 NZ_CP075116.1 Protein Homology CDS 1694394 1694981 . + 0 ID=cds-WP_001017057.1;Parent=gene-CCO40_RS07995;Dbxref=GenBank:WP_001017057.1;Name=WP_001017057.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=CCO40_RS07995;product=Yip1 family protein;protein_id=WP_001017057.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1695147 1696094 . + . ID=gene-CCO40_RS08000;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=CCO40_RS08000;old_locus_tag=CCO40_08000 NZ_CP075116.1 Protein Homology CDS 1695147 1696094 . + 0 ID=cds-WP_000911555.1;Parent=gene-CCO40_RS08000;Dbxref=GenBank:WP_000911555.1;Name=WP_000911555.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=CCO40_RS08000;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_000911555.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1696152 1697882 . - . ID=gene-CCO40_RS08005;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=CCO40_RS08005;old_locus_tag=CCO40_08005 NZ_CP075116.1 Protein Homology CDS 1696152 1697882 . - 0 ID=cds-WP_000095234.1;Parent=gene-CCO40_RS08005;Dbxref=GenBank:WP_000095234.1;Name=WP_000095234.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461112.1;locus_tag=CCO40_RS08005;product=D-lactate dehydrogenase;protein_id=WP_000095234.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1698149 1700446 . + . ID=gene-CCO40_RS08010;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=CCO40_RS08010;old_locus_tag=CCO40_08010 NZ_CP075116.1 Protein Homology CDS 1698149 1700446 . + 0 ID=cds-WP_080203168.1;Parent=gene-CCO40_RS08010;Dbxref=GenBank:WP_080203168.1;Name=WP_080203168.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461111.1;locus_tag=CCO40_RS08010;product=beta-glucosidase BglX;protein_id=WP_080203168.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1700627 1701544 . + . ID=gene-CCO40_RS08015;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=CCO40_RS08015;old_locus_tag=CCO40_08015 NZ_CP075116.1 Protein Homology CDS 1700627 1701544 . + 0 ID=cds-WP_000155876.1;Parent=gene-CCO40_RS08015;Dbxref=GenBank:WP_000155876.1;Name=WP_000155876.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461110.1;locus_tag=CCO40_RS08015;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_000155876.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1701548 1702717 . + . ID=gene-CCO40_RS08020;Name=CCO40_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08020;old_locus_tag=CCO40_08020 NZ_CP075116.1 Protein Homology CDS 1701548 1702717 . + 0 ID=cds-WP_094889184.1;Parent=gene-CCO40_RS08020;Dbxref=GenBank:WP_094889184.1;Name=WP_094889184.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461109.1;locus_tag=CCO40_RS08020;product=ABC transporter permease;protein_id=WP_094889184.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1702710 1703657 . + . ID=gene-CCO40_RS08025;Name=CCO40_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08025;old_locus_tag=CCO40_08025 NZ_CP075116.1 Protein Homology CDS 1702710 1703657 . + 0 ID=cds-WP_000569168.1;Parent=gene-CCO40_RS08025;Dbxref=GenBank:WP_000569168.1;Name=WP_000569168.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461108.1;locus_tag=CCO40_RS08025;product=ABC transporter ATP-binding protein;protein_id=WP_000569168.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1703641 1704372 . + . ID=gene-CCO40_RS08030;Name=CCO40_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08030;old_locus_tag=CCO40_08030 NZ_CP075116.1 Protein Homology CDS 1703641 1704372 . + 0 ID=cds-WP_000824854.1;Parent=gene-CCO40_RS08030;Dbxref=GenBank:WP_000824854.1;Name=WP_000824854.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461107.1;locus_tag=CCO40_RS08030;product=ABC transporter permease;protein_id=WP_000824854.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1704353 1704460 . - . ID=gene-CCO40_RS08035;Name=CCO40_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08035;old_locus_tag=CCO40_08035 NZ_CP075116.1 Protein Homology CDS 1704353 1704460 . - 0 ID=cds-WP_001261696.1;Parent=gene-CCO40_RS08035;Dbxref=GenBank:WP_001261696.1;Name=WP_001261696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461106.1;locus_tag=CCO40_RS08035;product=protein YohO;protein_id=WP_001261696.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1704520 1705251 . - . ID=gene-CCO40_RS08040;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=CCO40_RS08040;old_locus_tag=CCO40_08040 NZ_CP075116.1 Protein Homology CDS 1704520 1705251 . - 0 ID=cds-WP_001240418.1;Parent=gene-CCO40_RS08040;Dbxref=GenBank:WP_001240418.1;Name=WP_001240418.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461105.1;locus_tag=CCO40_RS08040;product=HTH-type transcriptional regulator MlrA;protein_id=WP_001240418.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1705474 1707159 . + . ID=gene-CCO40_RS08045;Name=CCO40_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08045;old_locus_tag=CCO40_08045 NZ_CP075116.1 Protein Homology CDS 1705474 1707159 . + 0 ID=cds-WP_000272850.1;Parent=gene-CCO40_RS08045;Dbxref=GenBank:WP_000272850.1;Name=WP_000272850.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=CCO40_RS08045;product=sensor histidine kinase;protein_id=WP_000272850.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1707156 1707875 . + . ID=gene-CCO40_RS08050;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=CCO40_RS08050;old_locus_tag=CCO40_08050 NZ_CP075116.1 Protein Homology CDS 1707156 1707875 . + 0 ID=cds-WP_000598637.1;Parent=gene-CCO40_RS08050;Dbxref=GenBank:WP_000598637.1;Name=WP_000598637.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=CCO40_RS08050;product=two-component system response regulator BtsR;protein_id=WP_000598637.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1707922 1708389 . + . ID=gene-CCO40_RS08055;Name=CCO40_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08055;old_locus_tag=CCO40_08055 NZ_CP075116.1 Protein Homology CDS 1707922 1708389 . + 0 ID=cds-WP_000950413.1;Parent=gene-CCO40_RS08055;Dbxref=GenBank:WP_000950413.1;Name=WP_000950413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461102.1;locus_tag=CCO40_RS08055;product=YehS family protein;protein_id=WP_000950413.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1708446 1708976 . - . ID=gene-CCO40_RS08060;Name=CCO40_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08060;old_locus_tag=CCO40_08060 NZ_CP075116.1 Protein Homology CDS 1708446 1708976 . - 0 ID=cds-WP_045717945.1;Parent=gene-CCO40_RS08060;Dbxref=GenBank:WP_045717945.1;Name=WP_045717945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461101.1;locus_tag=CCO40_RS08060;product=YehR family lipoprotein;protein_id=WP_045717945.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1709148 1709606 . - . ID=gene-CCO40_RS08065;Name=CCO40_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08065;old_locus_tag=CCO40_08065 NZ_CP075116.1 Protein Homology CDS 1709148 1709606 . - 0 ID=cds-WP_000703137.1;Parent=gene-CCO40_RS08065;Dbxref=GenBank:WP_000703137.1;Name=WP_000703137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461100.1;locus_tag=CCO40_RS08065;product=YehR family lipoprotein;protein_id=WP_000703137.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1709847 1711880 . - . ID=gene-CCO40_RS08070;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=CCO40_RS08070;old_locus_tag=CCO40_08070 NZ_CP075116.1 Protein Homology CDS 1709847 1711880 . - 0 ID=cds-WP_000195330.1;Parent=gene-CCO40_RS08070;Dbxref=GenBank:WP_000195330.1;Name=WP_000195330.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=CCO40_RS08070;product=methionine--tRNA ligase;protein_id=WP_000195330.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1712045 1713154 . + . ID=gene-CCO40_RS08075;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=CCO40_RS08075;old_locus_tag=CCO40_08075 NZ_CP075116.1 Protein Homology CDS 1712045 1713154 . + 0 ID=cds-WP_001005424.1;Parent=gene-CCO40_RS08075;Dbxref=GenBank:WP_001005424.1;Name=WP_001005424.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=CCO40_RS08075;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_001005424.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1713432 1713713 . + . ID=gene-CCO40_RS08080;Name=CCO40_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08080;old_locus_tag=CCO40_08080 NZ_CP075116.1 Protein Homology CDS 1713432 1713713 . + 0 ID=cds-WP_000760404.1;Parent=gene-CCO40_RS08080;Dbxref=GenBank:WP_000760404.1;Name=WP_000760404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461097.1;locus_tag=CCO40_RS08080;product=YehE family protein;protein_id=WP_000760404.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1713992 1714522 . + . ID=gene-CCO40_RS08085;Name=stcA;gbkey=Gene;gene=stcA;gene_biotype=protein_coding;locus_tag=CCO40_RS08085;old_locus_tag=CCO40_08085 NZ_CP075116.1 Protein Homology CDS 1713992 1714522 . + 0 ID=cds-WP_000830693.1;Parent=gene-CCO40_RS08085;Dbxref=GenBank:WP_000830693.1;Name=WP_000830693.1;gbkey=CDS;gene=stcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461096.1;locus_tag=CCO40_RS08085;product=Stc fimbria major subunit StcA;protein_id=WP_000830693.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1714578 1715261 . + . ID=gene-CCO40_RS08090;Name=stcB;gbkey=Gene;gene=stcB;gene_biotype=protein_coding;locus_tag=CCO40_RS08090;old_locus_tag=CCO40_08090 NZ_CP075116.1 Protein Homology CDS 1714578 1715261 . + 0 ID=cds-WP_000698775.1;Parent=gene-CCO40_RS08090;Dbxref=GenBank:WP_000698775.1;Name=WP_000698775.1;gbkey=CDS;gene=stcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461095.1;locus_tag=CCO40_RS08090;product=fimbrial biogenesis chaperone StcB;protein_id=WP_000698775.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1715275 1717764 . + . ID=gene-CCO40_RS08095;Name=CCO40_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08095;old_locus_tag=CCO40_08095 NZ_CP075116.1 Protein Homology CDS 1715275 1717764 . + 0 ID=cds-WP_000945363.1;Parent=gene-CCO40_RS08095;Dbxref=GenBank:WP_000945363.1;Name=WP_000945363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461094.1;locus_tag=CCO40_RS08095;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_000945363.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1717780 1718787 . + . ID=gene-CCO40_RS08100;Name=CCO40_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08100;old_locus_tag=CCO40_08100 NZ_CP075116.1 Protein Homology CDS 1717780 1718787 . + 0 ID=cds-WP_000765280.1;Parent=gene-CCO40_RS08100;Dbxref=GenBank:WP_000765280.1;Name=WP_000765280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461093.1;locus_tag=CCO40_RS08100;product=putative fimbrial-like adhesin protein;protein_id=WP_000765280.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1719049 1719363 . - . ID=gene-CCO40_RS08105;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=CCO40_RS08105;old_locus_tag=CCO40_08105 NZ_CP075116.1 Protein Homology CDS 1719049 1719363 . - 0 ID=cds-WP_000837534.1;Parent=gene-CCO40_RS08105;Dbxref=GenBank:WP_000837534.1;Name=WP_000837534.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461092.1;locus_tag=CCO40_RS08105;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_000837534.1;transl_table=11 NZ_CP075116.1 cmsearch riboswitch 1719645 1719741 . + . ID=id-NZ_CP075116.1:1719645..1719741;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00059,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CP075116.1 RefSeq gene 1719773 1720570 . + . ID=gene-CCO40_RS08110;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=CCO40_RS08110;old_locus_tag=CCO40_08110 NZ_CP075116.1 Protein Homology CDS 1719773 1720570 . + 0 ID=cds-WP_094889183.1;Parent=gene-CCO40_RS08110;Dbxref=GenBank:WP_094889183.1;Name=WP_094889183.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461091.1;locus_tag=CCO40_RS08110;product=hydroxyethylthiazole kinase;protein_id=WP_094889183.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1720557 1721357 . + . ID=gene-CCO40_RS08115;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=CCO40_RS08115;old_locus_tag=CCO40_08115 NZ_CP075116.1 Protein Homology CDS 1720557 1721357 . + 0 ID=cds-WP_001188957.1;Parent=gene-CCO40_RS08115;Dbxref=GenBank:WP_001188957.1;Name=WP_001188957.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461090.1;locus_tag=CCO40_RS08115;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_001188957.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1721393 1722139 . + . ID=gene-CCO40_RS08120;Name=CCO40_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08120;old_locus_tag=CCO40_08120 NZ_CP075116.1 Protein Homology CDS 1721393 1722139 . + 0 ID=cds-WP_000434062.1;Parent=gene-CCO40_RS08120;Dbxref=GenBank:WP_000434062.1;Name=WP_000434062.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461089.1;locus_tag=CCO40_RS08120;product=GntR family transcriptional regulator;protein_id=WP_000434062.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1722113 1723078 . - . ID=gene-CCO40_RS08125;Name=CCO40_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08125;old_locus_tag=CCO40_08125 NZ_CP075116.1 Protein Homology CDS 1722113 1723078 . - 0 ID=cds-WP_001012652.1;Parent=gene-CCO40_RS08125;Dbxref=GenBank:WP_001012652.1;Name=WP_001012652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461088.1;locus_tag=CCO40_RS08125;product=PfkB family carbohydrate kinase;protein_id=WP_001012652.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1723075 1724079 . - . ID=gene-CCO40_RS08130;Name=CCO40_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08130;old_locus_tag=CCO40_08130 NZ_CP075116.1 Protein Homology CDS 1723075 1724079 . - 0 ID=cds-WP_000642793.1;Parent=gene-CCO40_RS08130;Dbxref=GenBank:WP_000642793.1;Name=WP_000642793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461087.1;locus_tag=CCO40_RS08130;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000642793.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1724076 1725347 . - . ID=gene-CCO40_RS08135;Name=CCO40_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08135;old_locus_tag=CCO40_08135 NZ_CP075116.1 Protein Homology CDS 1724076 1725347 . - 0 ID=cds-WP_000858692.1;Parent=gene-CCO40_RS08135;Dbxref=GenBank:WP_000858692.1;Name=WP_000858692.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461086.1;locus_tag=CCO40_RS08135;product=nucleoside permease;protein_id=WP_000858692.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1725601 1726653 . + . ID=gene-CCO40_RS08140;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=CCO40_RS08140;old_locus_tag=CCO40_08140 NZ_CP075116.1 Protein Homology CDS 1725601 1726653 . + 0 ID=cds-WP_000129590.1;Parent=gene-CCO40_RS08140;Dbxref=GenBank:WP_000129590.1;Name=WP_000129590.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=CCO40_RS08140;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129590.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1726706 1727605 . - . ID=gene-CCO40_RS08145;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=CCO40_RS08145;old_locus_tag=CCO40_08145 NZ_CP075116.1 Protein Homology CDS 1726706 1727605 . - 0 ID=cds-WP_001273392.1;Parent=gene-CCO40_RS08145;Dbxref=GenBank:WP_001273392.1;Name=WP_001273392.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461084.1;locus_tag=CCO40_RS08145;product=lipid kinase YegS;protein_id=WP_001273392.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1728167 1728502 . + . ID=gene-CCO40_RS08150;Name=steD;gbkey=Gene;gene=steD;gene_biotype=protein_coding;locus_tag=CCO40_RS08150;old_locus_tag=CCO40_08150 NZ_CP075116.1 Protein Homology CDS 1728167 1728502 . + 0 ID=cds-WP_012512945.1;Parent=gene-CCO40_RS08150;Dbxref=GenBank:WP_012512945.1;Name=WP_012512945.1;gbkey=CDS;gene=steD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461083.1;locus_tag=CCO40_RS08150;product=type III secretion system effector SteD;protein_id=WP_012512945.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1728624 1729040 . + . ID=gene-CCO40_RS08155;Name=CCO40_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08155;old_locus_tag=CCO40_08155 NZ_CP075116.1 Protein Homology CDS 1728624 1729040 . + 0 ID=cds-WP_001682309.1;Parent=gene-CCO40_RS08155;Dbxref=GenBank:WP_001682309.1;Name=WP_001682309.1;Ontology_term=GO:0030254;gbkey=CDS;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461082.1;locus_tag=CCO40_RS08155;product=CesT family type III secretion system chaperone;protein_id=WP_001682309.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1729076 1730122 . - . ID=gene-CCO40_RS08160;Name=sseK2;gbkey=Gene;gene=sseK2;gene_biotype=protein_coding;locus_tag=CCO40_RS08160;old_locus_tag=CCO40_08160 NZ_CP075116.1 Protein Homology CDS 1729076 1730122 . - 0 ID=cds-WP_077906120.1;Parent=gene-CCO40_RS08160;Dbxref=GenBank:WP_077906120.1;Name=WP_077906120.1;gbkey=CDS;gene=sseK2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=CCO40_RS08160;product=type III secretion system effector arginine glycosyltransferase SseK2;protein_id=WP_077906120.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1730573 1731934 . - . ID=gene-CCO40_RS08165;Name=trhP;gbkey=Gene;gene=trhP;gene_biotype=protein_coding;gene_synonym=yegQ;locus_tag=CCO40_RS08165;old_locus_tag=CCO40_08165 NZ_CP075116.1 Protein Homology CDS 1730573 1731934 . - 0 ID=cds-WP_094889192.1;Parent=gene-CCO40_RS08165;Dbxref=GenBank:WP_094889192.1;Name=WP_094889192.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhP;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461080.1;locus_tag=CCO40_RS08165;product=prephenate-dependent tRNA uridine(34) hydroxylase TrhP;protein_id=WP_094889192.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1732050 1734161 . - . ID=gene-CCO40_RS08170;Name=CCO40_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08170;old_locus_tag=CCO40_08170 NZ_CP075116.1 Protein Homology CDS 1732050 1734161 . - 0 ID=cds-WP_000434220.1;Parent=gene-CCO40_RS08170;Dbxref=GenBank:WP_000434220.1;Name=WP_000434220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=CCO40_RS08170;product=DUF4034 domain-containing protein;protein_id=WP_000434220.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1734172 1734888 . - . ID=gene-CCO40_RS08175;Name=CCO40_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08175;old_locus_tag=CCO40_08175 NZ_CP075116.1 Protein Homology CDS 1734172 1734888 . - 0 ID=cds-WP_000498587.1;Parent=gene-CCO40_RS08175;Dbxref=GenBank:WP_000498587.1;Name=WP_000498587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=CCO40_RS08175;product=DUF1266 domain-containing protein;protein_id=WP_000498587.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1734888 1736090 . - . ID=gene-CCO40_RS08180;Name=CCO40_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08180;old_locus_tag=CCO40_08180 NZ_CP075116.1 Protein Homology CDS 1734888 1736090 . - 0 ID=cds-WP_000141067.1;Parent=gene-CCO40_RS08180;Dbxref=GenBank:WP_000141067.1;Name=WP_000141067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141078.1;locus_tag=CCO40_RS08180;product=hypothetical protein;protein_id=WP_000141067.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1736359 1737081 . - . ID=gene-CCO40_RS08185;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=CCO40_RS08185;old_locus_tag=CCO40_08185 NZ_CP075116.1 Protein Homology CDS 1736359 1737081 . - 0 ID=cds-WP_000137854.1;Parent=gene-CCO40_RS08185;Dbxref=GenBank:WP_000137854.1;Name=WP_000137854.1;Ontology_term=GO:0000160,GO:2000142,GO:0003700;gbkey=CDS;gene=baeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=CCO40_RS08185;product=envelope stress response regulator BaeR;protein_id=WP_000137854.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1737078 1738481 . - . ID=gene-CCO40_RS08190;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=CCO40_RS08190;old_locus_tag=CCO40_08190 NZ_CP075116.1 Protein Homology CDS 1737078 1738481 . - 0 ID=cds-WP_000870075.1;Parent=gene-CCO40_RS08190;Dbxref=GenBank:WP_000870075.1;Name=WP_000870075.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461075.1;locus_tag=CCO40_RS08190;product=envelope stress sensor histidine kinase BaeS;protein_id=WP_000870075.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1738481 1739893 . - . ID=gene-CCO40_RS08195;Name=CCO40_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08195;old_locus_tag=CCO40_08195 NZ_CP075116.1 Protein Homology CDS 1738481 1739893 . - 0 ID=cds-WP_000137830.1;Parent=gene-CCO40_RS08195;Dbxref=GenBank:WP_000137830.1;Name=WP_000137830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461074.1;locus_tag=CCO40_RS08195;product=MFS transporter;protein_id=WP_000137830.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1739890 1742970 . - . ID=gene-CCO40_RS08200;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=CCO40_RS08200;old_locus_tag=CCO40_08200 NZ_CP075116.1 Protein Homology CDS 1739890 1742970 . - 0 ID=cds-WP_094889182.1;Parent=gene-CCO40_RS08200;Dbxref=GenBank:WP_094889182.1;Name=WP_094889182.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=CCO40_RS08200;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_094889182.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1742971 1746093 . - . ID=gene-CCO40_RS08205;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=CCO40_RS08205;old_locus_tag=CCO40_08205 NZ_CP075116.1 Protein Homology CDS 1742971 1746093 . - 0 ID=cds-WP_094889181.1;Parent=gene-CCO40_RS08205;Dbxref=GenBank:WP_094889181.1;Name=WP_094889181.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=CCO40_RS08205;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_094889181.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1746093 1747334 . - . ID=gene-CCO40_RS08210;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=CCO40_RS08210;old_locus_tag=CCO40_08210 NZ_CP075116.1 Protein Homology CDS 1746093 1747334 . - 0 ID=cds-WP_000678816.1;Parent=gene-CCO40_RS08210;Dbxref=GenBank:WP_000678816.1;Name=WP_000678816.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461071.1;locus_tag=CCO40_RS08210;product=multidrug efflux RND transporter subunit MdtA;protein_id=WP_000678816.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1747617 1747676 . + . ID=gene-CCO40_RS08215;Name=CCO40_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08215;old_locus_tag=CCO40_08215 NZ_CP075116.1 Protein Homology CDS 1747617 1747676 . + 0 ID=cds-WP_105887528.1;Parent=gene-CCO40_RS08215;Dbxref=GenBank:WP_105887528.1;Name=WP_105887528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=CCO40_RS08215;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_105887528.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1747775 1749127 . - . ID=gene-CCO40_RS08220;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=CCO40_RS08220;old_locus_tag=CCO40_08220 NZ_CP075116.1 Protein Homology CDS 1747775 1749127 . - 0 ID=cds-WP_094889180.1;Parent=gene-CCO40_RS08220;Dbxref=GenBank:WP_094889180.1;Name=WP_094889180.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=CCO40_RS08220;product=molecular chaperone;protein_id=WP_094889180.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1749261 1750130 . + . ID=gene-CCO40_RS08225;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=CCO40_RS08225;old_locus_tag=CCO40_08225 NZ_CP075116.1 Protein Homology CDS 1749261 1750130 . + 0 ID=cds-WP_000494706.1;Parent=gene-CCO40_RS08225;Dbxref=GenBank:WP_000494706.1;Name=WP_000494706.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=CCO40_RS08225;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_000494706.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1750098 1753088 . - . ID=gene-CCO40_RS08230;Name=CCO40_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08230;old_locus_tag=CCO40_08230 NZ_CP075116.1 Protein Homology CDS 1750098 1753088 . - 0 ID=cds-WP_000042935.1;Parent=gene-CCO40_RS08230;Dbxref=GenBank:WP_000042935.1;Name=WP_000042935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461068.1;locus_tag=CCO40_RS08230;product=MASE1 domain-containing protein;protein_id=WP_000042935.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1753419 1754060 . + . ID=gene-CCO40_RS08235;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=CCO40_RS08235;old_locus_tag=CCO40_08235 NZ_CP075116.1 Protein Homology CDS 1753419 1754060 . + 0 ID=cds-WP_000132082.1;Parent=gene-CCO40_RS08235;Dbxref=GenBank:WP_000132082.1;Name=WP_000132082.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=CCO40_RS08235;product=uridine kinase;protein_id=WP_000132082.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1754151 1754732 . + . ID=gene-CCO40_RS08240;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=CCO40_RS08240;old_locus_tag=CCO40_08240 NZ_CP075116.1 Protein Homology CDS 1754151 1754732 . + 0 ID=cds-WP_001234783.1;Parent=gene-CCO40_RS08240;Dbxref=GenBank:WP_001234783.1;Name=WP_001234783.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=CCO40_RS08240;product=dCTP deaminase;protein_id=WP_001234783.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1754771 1756627 . + . ID=gene-CCO40_RS08245;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=CCO40_RS08245;old_locus_tag=CCO40_08245 NZ_CP075116.1 Protein Homology CDS 1754771 1756627 . + 0 ID=cds-WP_001252267.1;Parent=gene-CCO40_RS08245;Dbxref=GenBank:WP_001252267.1;Name=WP_001252267.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=CCO40_RS08245;product=outer membrane assembly protein AsmA;protein_id=WP_001252267.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1756713 1758293 . - . ID=gene-CCO40_RS08250;Name=CCO40_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08250;old_locus_tag=CCO40_08250 NZ_CP075116.1 Protein Homology CDS 1756713 1758293 . - 0 ID=cds-WP_000454716.1;Parent=gene-CCO40_RS08250;Dbxref=GenBank:WP_000454716.1;Name=WP_000454716.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461064.1;locus_tag=CCO40_RS08250;product=TerC family protein;protein_id=WP_000454716.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1758968 1760107 . + . ID=gene-CCO40_RS08255;Name=CCO40_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08255;old_locus_tag=CCO40_08255 NZ_CP075116.1 Protein Homology CDS 1758968 1760107 . + 0 ID=cds-WP_000978077.1;Parent=gene-CCO40_RS08255;Dbxref=GenBank:WP_000978077.1;Name=WP_000978077.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=CCO40_RS08255;product=polysaccharide export protein;protein_id=WP_000978077.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1760113 1760562 . + . ID=gene-CCO40_RS08260;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=CCO40_RS08260;old_locus_tag=CCO40_08260 NZ_CP075116.1 Protein Homology CDS 1760113 1760562 . + 0 ID=cds-WP_000482224.1;Parent=gene-CCO40_RS08260;Dbxref=GenBank:WP_000482224.1;Name=WP_000482224.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=CCO40_RS08260;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_000482224.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1760559 1762718 . + . ID=gene-CCO40_RS08265;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=CCO40_RS08265;old_locus_tag=CCO40_08265 NZ_CP075116.1 Protein Homology CDS 1760559 1762718 . + 0 ID=cds-WP_000137227.1;Parent=gene-CCO40_RS08265;Dbxref=GenBank:WP_000137227.1;Name=WP_000137227.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=CCO40_RS08265;product=tyrosine-protein kinase Wzc;protein_id=WP_000137227.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1762805 1763647 . + . ID=gene-CCO40_RS08270;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=CCO40_RS08270;old_locus_tag=CCO40_08270 NZ_CP075116.1 Protein Homology CDS 1762805 1763647 . + 0 ID=cds-WP_000205695.1;Parent=gene-CCO40_RS08270;Dbxref=GenBank:WP_000205695.1;Name=WP_000205695.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=CCO40_RS08270;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_000205695.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1763650 1764138 . + . ID=gene-CCO40_RS08275;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=CCO40_RS08275;old_locus_tag=CCO40_08275 NZ_CP075116.1 Protein Homology CDS 1763650 1764138 . + 0 ID=cds-WP_000888724.1;Parent=gene-CCO40_RS08275;Dbxref=GenBank:WP_000888724.1;Name=WP_000888724.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461059.1;locus_tag=CCO40_RS08275;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_000888724.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1764135 1765352 . + . ID=gene-CCO40_RS08280;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=CCO40_RS08280;old_locus_tag=CCO40_08280 NZ_CP075116.1 Protein Homology CDS 1764135 1765352 . + 0 ID=cds-WP_079950493.1;Parent=gene-CCO40_RS08280;Dbxref=GenBank:WP_079950493.1;Name=WP_079950493.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461058.1;locus_tag=CCO40_RS08280;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_079950493.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1765327 1766541 . + . ID=gene-CCO40_RS08285;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=CCO40_RS08285;old_locus_tag=CCO40_08285 NZ_CP075116.1 Protein Homology CDS 1765327 1766541 . + 0 ID=cds-WP_094889179.1;Parent=gene-CCO40_RS08285;Dbxref=GenBank:WP_094889179.1;Name=WP_094889179.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461057.1;locus_tag=CCO40_RS08285;product=colanic acid polymerase WcaD;protein_id=WP_094889179.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1766554 1767300 . + . ID=gene-CCO40_RS08290;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=CCO40_RS08290;old_locus_tag=CCO40_08290 NZ_CP075116.1 Protein Homology CDS 1766554 1767300 . + 0 ID=cds-WP_094889178.1;Parent=gene-CCO40_RS08290;Dbxref=GenBank:WP_094889178.1;Name=WP_094889178.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461056.1;locus_tag=CCO40_RS08290;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_094889178.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1767316 1767870 . + . ID=gene-CCO40_RS08295;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=CCO40_RS08295;old_locus_tag=CCO40_08295 NZ_CP075116.1 Protein Homology CDS 1767316 1767870 . + 0 ID=cds-WP_001153603.1;Parent=gene-CCO40_RS08295;Dbxref=GenBank:WP_001153603.1;Name=WP_001153603.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=CCO40_RS08295;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_001153603.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1767894 1769015 . + . ID=gene-CCO40_RS08300;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=CCO40_RS08300;old_locus_tag=CCO40_08300 NZ_CP075116.1 Protein Homology CDS 1767894 1769015 . + 0 ID=cds-WP_000048160.1;Parent=gene-CCO40_RS08300;Dbxref=GenBank:WP_000048160.1;Name=WP_000048160.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=CCO40_RS08300;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_000048160.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1769018 1769983 . + . ID=gene-CCO40_RS08305;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=CCO40_RS08305;old_locus_tag=CCO40_08305 NZ_CP075116.1 Protein Homology CDS 1769018 1769983 . + 0 ID=cds-WP_001041703.1;Parent=gene-CCO40_RS08305;Dbxref=GenBank:WP_001041703.1;Name=WP_001041703.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461053.1;locus_tag=CCO40_RS08305;product=GDP-L-fucose synthase;protein_id=WP_001041703.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1769986 1770459 . + . ID=gene-CCO40_RS08310;Name=CCO40_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08310;old_locus_tag=CCO40_08310 NZ_CP075116.1 Protein Homology CDS 1769986 1770459 . + 0 ID=cds-WP_001531761.1;Parent=gene-CCO40_RS08310;Dbxref=GenBank:WP_001531761.1;Name=WP_001531761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526160.1;locus_tag=CCO40_RS08310;product=GDP-mannose mannosyl hydrolase;protein_id=WP_001531761.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1770456 1771679 . + . ID=gene-CCO40_RS08315;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=CCO40_RS08315;old_locus_tag=CCO40_08315 NZ_CP075116.1 Protein Homology CDS 1770456 1771679 . + 0 ID=cds-WP_000699632.1;Parent=gene-CCO40_RS08315;Dbxref=GenBank:WP_000699632.1;Name=WP_000699632.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461051.1;locus_tag=CCO40_RS08315;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WP_000699632.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1771676 1773118 . + . ID=gene-CCO40_RS08320;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=CCO40_RS08320;old_locus_tag=CCO40_08320 NZ_CP075116.1 Protein Homology CDS 1771676 1773118 . + 0 ID=cds-WP_000605945.1;Parent=gene-CCO40_RS08320;Dbxref=GenBank:WP_000605945.1;Name=WP_000605945.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461050.3;locus_tag=CCO40_RS08320;product=mannose-1-phosphate guanyltransferase;protein_id=WP_000605945.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1773229 1774599 . + . ID=gene-CCO40_RS08325;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=CCO40_RS08325;old_locus_tag=CCO40_08325 NZ_CP075116.1 Protein Homology CDS 1773229 1774599 . + 0 ID=cds-WP_000164197.1;Parent=gene-CCO40_RS08325;Dbxref=GenBank:WP_000164197.1;Name=WP_000164197.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=CCO40_RS08325;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WP_000164197.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1774653 1776047 . + . ID=gene-CCO40_RS08330;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=CCO40_RS08330;old_locus_tag=CCO40_08330 NZ_CP075116.1 Protein Homology CDS 1774653 1776047 . + 0 ID=cds-WP_000183163.1;Parent=gene-CCO40_RS08330;Dbxref=GenBank:WP_000183163.1;Name=WP_000183163.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=CCO40_RS08330;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_000183163.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1776149 1777627 . + . ID=gene-CCO40_RS08335;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=CCO40_RS08335;old_locus_tag=CCO40_08335 NZ_CP075116.1 Protein Homology CDS 1776149 1777627 . + 0 ID=cds-WP_000058677.1;Parent=gene-CCO40_RS08335;Dbxref=GenBank:WP_000058677.1;Name=WP_000058677.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=CCO40_RS08335;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WP_000058677.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1777649 1778929 . + . ID=gene-CCO40_RS08340;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=CCO40_RS08340;old_locus_tag=CCO40_08340 NZ_CP075116.1 Protein Homology CDS 1777649 1778929 . + 0 ID=cds-WP_045717386.1;Parent=gene-CCO40_RS08340;Dbxref=GenBank:WP_045717386.1;Name=WP_045717386.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=CCO40_RS08340;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_045717386.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1778926 1780146 . + . ID=gene-CCO40_RS08345;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=CCO40_RS08345;old_locus_tag=CCO40_08345 NZ_CP075116.1 Protein Homology CDS 1778926 1780146 . + 0 ID=cds-WP_000868520.1;Parent=gene-CCO40_RS08345;Dbxref=GenBank:WP_000868520.1;Name=WP_000868520.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=CCO40_RS08345;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_000868520.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1780157 1781560 . + . ID=gene-CCO40_RS08350;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=CCO40_RS08350;old_locus_tag=CCO40_08350 NZ_CP075116.1 Protein Homology CDS 1780157 1781560 . + 0 ID=cds-WP_094889177.1;Parent=gene-CCO40_RS08350;Dbxref=GenBank:WP_094889177.1;Name=WP_094889177.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=CCO40_RS08350;product=colanic acid biosynthesis protein WcaM;protein_id=WP_094889177.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1781738 1782631 . + . ID=gene-CCO40_RS08355;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=CCO40_RS08355;old_locus_tag=CCO40_08355 NZ_CP075116.1 Protein Homology CDS 1781738 1782631 . + 0 ID=cds-WP_000981469.1;Parent=gene-CCO40_RS08355;Dbxref=GenBank:WP_000981469.1;Name=WP_000981469.1;Ontology_term=GO:0006011,GO:0030234;gbkey=CDS;gene=galF;go_function=enzyme regulator activity|0030234||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461043.1;locus_tag=CCO40_RS08355;product=GalU regulator GalF;protein_id=WP_000981469.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1783008 1784093 . + . ID=gene-CCO40_RS08360;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=CCO40_RS08360;old_locus_tag=CCO40_08360 NZ_CP075116.1 Protein Homology CDS 1783008 1784093 . + 0 ID=cds-WP_094889176.1;Parent=gene-CCO40_RS08360;Dbxref=GenBank:WP_094889176.1;Name=WP_094889176.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461042.1;locus_tag=CCO40_RS08360;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_094889176.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1784093 1784992 . + . ID=gene-CCO40_RS08365;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=CCO40_RS08365;old_locus_tag=CCO40_08365 NZ_CP075116.1 Protein Homology CDS 1784093 1784992 . + 0 ID=cds-WP_094889175.1;Parent=gene-CCO40_RS08365;Dbxref=GenBank:WP_094889175.1;Name=WP_094889175.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461041.1;locus_tag=CCO40_RS08365;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_094889175.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1785040 1785918 . + . ID=gene-CCO40_RS08370;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=CCO40_RS08370;old_locus_tag=CCO40_08370 NZ_CP075116.1 Protein Homology CDS 1785040 1785918 . + 0 ID=cds-WP_000857529.1;Parent=gene-CCO40_RS08370;Dbxref=GenBank:WP_000857529.1;Name=WP_000857529.1;Ontology_term=GO:0000271,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461040.1;locus_tag=CCO40_RS08370;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_000857529.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1785919 1786470 . + . ID=gene-CCO40_RS08375;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=CCO40_RS08375;old_locus_tag=CCO40_08375 NZ_CP075116.1 Protein Homology CDS 1785919 1786470 . + 0 ID=cds-WP_000973708.1;Parent=gene-CCO40_RS08375;Dbxref=GenBank:WP_000973708.1;Name=WP_000973708.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461039.1;locus_tag=CCO40_RS08375;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_000973708.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1786476 1787468 . + . ID=gene-CCO40_RS08380;Name=CCO40_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08380;old_locus_tag=CCO40_08380 NZ_CP075116.1 Protein Homology CDS 1786476 1787468 . + 0 ID=cds-WP_000018226.1;Parent=gene-CCO40_RS08380;Dbxref=GenBank:WP_000018226.1;Name=WP_000018226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461038.1;locus_tag=CCO40_RS08380;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;protein_id=WP_000018226.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1787465 1788238 . + . ID=gene-CCO40_RS08385;Name=rfbF;gbkey=Gene;gene=rfbF;gene_biotype=protein_coding;locus_tag=CCO40_RS08385;old_locus_tag=CCO40_08385 NZ_CP075116.1 Protein Homology CDS 1787465 1788238 . + 0 ID=cds-WP_000648784.1;Parent=gene-CCO40_RS08385;Dbxref=GenBank:WP_000648784.1;Name=WP_000648784.1;Ontology_term=GO:0009243,GO:0047343;gbkey=CDS;gene=rfbF;go_function=glucose-1-phosphate cytidylyltransferase activity|0047343||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461037.1;locus_tag=CCO40_RS08385;product=glucose-1-phosphate cytidylyltransferase;protein_id=WP_000648784.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1788243 1789322 . + . ID=gene-CCO40_RS08390;Name=rfbG;gbkey=Gene;gene=rfbG;gene_biotype=protein_coding;locus_tag=CCO40_RS08390;old_locus_tag=CCO40_08390 NZ_CP075116.1 Protein Homology CDS 1788243 1789322 . + 0 ID=cds-WP_000565905.1;Parent=gene-CCO40_RS08390;Dbxref=GenBank:WP_000565905.1;Name=WP_000565905.1;Ontology_term=GO:0009243,GO:0047733;gbkey=CDS;gene=rfbG;go_function=CDP-glucose 4%2C6-dehydratase activity|0047733||IEA;go_process=O antigen biosynthetic process|0009243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461036.1;locus_tag=CCO40_RS08390;product=CDP-glucose 4%2C6-dehydratase;protein_id=WP_000565905.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1789349 1790662 . + . ID=gene-CCO40_RS08395;Name=rfbH;gbkey=Gene;gene=rfbH;gene_biotype=protein_coding;locus_tag=CCO40_RS08395;old_locus_tag=CCO40_08395 NZ_CP075116.1 Protein Homology CDS 1789349 1790662 . + 0 ID=cds-WP_000126349.1;Parent=gene-CCO40_RS08395;Dbxref=GenBank:WP_000126349.1;Name=WP_000126349.1;Ontology_term=GO:0003824;gbkey=CDS;gene=rfbH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461035.1;locus_tag=CCO40_RS08395;product=lipopolysaccharide biosynthesis protein RfbH;protein_id=WP_000126349.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1790690 1791589 . + . ID=gene-CCO40_RS08400;Name=rfbJ;gbkey=Gene;gene=rfbJ;gene_biotype=protein_coding;locus_tag=CCO40_RS08400;old_locus_tag=CCO40_08400 NZ_CP075116.1 Protein Homology CDS 1790690 1791589 . + 0 ID=cds-WP_000143399.1;Parent=gene-CCO40_RS08400;Dbxref=GenBank:WP_000143399.1;Name=WP_000143399.1;gbkey=CDS;gene=rfbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461034.1;locus_tag=CCO40_RS08400;product=CDP-abequose synthase;protein_id=WP_000143399.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1791671 1792963 . + . ID=gene-CCO40_RS08405;Name=CCO40_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08405;old_locus_tag=CCO40_08405 NZ_CP075116.1 Protein Homology CDS 1791671 1792963 . + 0 ID=cds-WP_001531712.1;Parent=gene-CCO40_RS08405;Dbxref=GenBank:WP_001531712.1;Name=WP_001531712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461033.1;locus_tag=CCO40_RS08405;product=MATE family efflux transporter;protein_id=WP_001531712.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1792968 1793969 . + . ID=gene-CCO40_RS08410;Name=rfbV;gbkey=Gene;gene=rfbV;gene_biotype=protein_coding;locus_tag=CCO40_RS08410;old_locus_tag=CCO40_08410 NZ_CP075116.1 Protein Homology CDS 1792968 1793969 . + 0 ID=cds-WP_000908622.1;Parent=gene-CCO40_RS08410;Dbxref=GenBank:WP_000908622.1;Name=WP_000908622.1;gbkey=CDS;gene=rfbV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461032.1;locus_tag=CCO40_RS08410;product=abequosyltransferase RfbV;protein_id=WP_000908622.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1794290 1795351 . + . ID=gene-CCO40_RS08415;Name=CCO40_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08415;old_locus_tag=CCO40_08415 NZ_CP075116.1 Protein Homology CDS 1794290 1795351 . + 0 ID=cds-WP_001521643.1;Parent=gene-CCO40_RS08415;Dbxref=GenBank:WP_001521643.1;Name=WP_001521643.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461031.1;locus_tag=CCO40_RS08415;product=glycosyltransferase family 4 protein;protein_id=WP_001521643.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1795352 1796296 . + . ID=gene-CCO40_RS08420;Name=rfbN;gbkey=Gene;gene=rfbN;gene_biotype=protein_coding;locus_tag=CCO40_RS08420;old_locus_tag=CCO40_08420 NZ_CP075116.1 Protein Homology CDS 1795352 1796296 . + 0 ID=cds-WP_000705151.1;Parent=gene-CCO40_RS08420;Dbxref=GenBank:WP_000705151.1;Name=WP_000705151.1;gbkey=CDS;gene=rfbN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461030.1;locus_tag=CCO40_RS08420;product=O antigen biosynthesis rhamnosyltransferase RfbN;protein_id=WP_000705151.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1796297 1797736 . + . ID=gene-CCO40_RS08425;Name=CCO40_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08425;old_locus_tag=CCO40_08425 NZ_CP075116.1 Protein Homology CDS 1796297 1797736 . + 0 ID=cds-WP_000009017.1;Parent=gene-CCO40_RS08425;Dbxref=GenBank:WP_000009017.1;Name=WP_000009017.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461029.1;locus_tag=CCO40_RS08425;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_000009017.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1797723 1799156 . + . ID=gene-CCO40_RS08430;Name=rfbK;gbkey=Gene;gene=rfbK;gene_biotype=protein_coding;locus_tag=CCO40_RS08430;old_locus_tag=CCO40_08430 NZ_CP075116.1 Protein Homology CDS 1797723 1799156 . + 0 ID=cds-WP_001103643.1;Parent=gene-CCO40_RS08430;Dbxref=GenBank:WP_001103643.1;Name=WP_001103643.1;gbkey=CDS;gene=rfbK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461028.1;locus_tag=CCO40_RS08430;product=O-antigen biosynthesis phosphomannomutase RfbK;protein_id=WP_001103643.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1799228 1800658 . + . ID=gene-CCO40_RS08435;Name=CCO40_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08435;old_locus_tag=CCO40_08435 NZ_CP075116.1 Protein Homology CDS 1799228 1800658 . + 0 ID=cds-WP_000368707.1;Parent=gene-CCO40_RS08435;Dbxref=GenBank:WP_000368707.1;Name=WP_000368707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461027.1;locus_tag=CCO40_RS08435;product=undecaprenyl-phosphate galactose phosphotransferase;protein_id=WP_000368707.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1800822 1802228 . + . ID=gene-CCO40_RS08440;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=CCO40_RS08440;old_locus_tag=CCO40_08440 NZ_CP075116.1 Protein Homology CDS 1800822 1802228 . + 0 ID=cds-WP_000043530.1;Parent=gene-CCO40_RS08440;Dbxref=GenBank:WP_000043530.1;Name=WP_000043530.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gnd;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461026.1;locus_tag=CCO40_RS08440;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_000043530.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1802465 1803631 . + . ID=gene-CCO40_RS08445;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=CCO40_RS08445;old_locus_tag=CCO40_08445 NZ_CP075116.1 Protein Homology CDS 1802465 1803631 . + 0 ID=cds-WP_094889174.1;Parent=gene-CCO40_RS08445;Dbxref=GenBank:WP_094889174.1;Name=WP_094889174.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461025.1;locus_tag=CCO40_RS08445;product=UDP-glucose 6-dehydrogenase;protein_id=WP_094889174.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1803774 1804757 . + . ID=gene-CCO40_RS08450;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=CCO40_RS08450;old_locus_tag=CCO40_08450 NZ_CP075116.1 Protein Homology CDS 1803774 1804757 . + 0 ID=cds-WP_000215261.1;Parent=gene-CCO40_RS08450;Dbxref=GenBank:WP_000215261.1;Name=WP_000215261.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461024.1;locus_tag=CCO40_RS08450;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_000215261.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1804838 1805449 . - . ID=gene-CCO40_RS08455;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=CCO40_RS08455;old_locus_tag=CCO40_08455 NZ_CP075116.1 Protein Homology CDS 1804838 1805449 . - 0 ID=cds-WP_000954848.1;Parent=gene-CCO40_RS08455;Dbxref=GenBank:WP_000954848.1;Name=WP_000954848.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=CCO40_RS08455;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_000954848.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1805443 1806219 . - . ID=gene-CCO40_RS08460;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=CCO40_RS08460;old_locus_tag=CCO40_08460 NZ_CP075116.1 Protein Homology CDS 1805443 1806219 . - 0 ID=cds-WP_000880125.1;Parent=gene-CCO40_RS08460;Dbxref=GenBank:WP_000880125.1;Name=WP_000880125.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461022.1;locus_tag=CCO40_RS08460;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_000880125.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1806201 1806938 . - . ID=gene-CCO40_RS08465;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=CCO40_RS08465;old_locus_tag=CCO40_08465 NZ_CP075116.1 Protein Homology CDS 1806201 1806938 . - 0 ID=cds-WP_000586409.1;Parent=gene-CCO40_RS08465;Dbxref=GenBank:WP_000586409.1;Name=WP_000586409.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461021.1;locus_tag=CCO40_RS08465;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_000586409.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1806938 1807528 . - . ID=gene-CCO40_RS08470;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=CCO40_RS08470;old_locus_tag=CCO40_08470 NZ_CP075116.1 Protein Homology CDS 1806938 1807528 . - 0 ID=cds-WP_001103591.1;Parent=gene-CCO40_RS08470;Dbxref=GenBank:WP_001103591.1;Name=WP_001103591.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=CCO40_RS08470;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_001103591.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1807528 1808595 . - . ID=gene-CCO40_RS08475;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=CCO40_RS08475;old_locus_tag=CCO40_08475 NZ_CP075116.1 Protein Homology CDS 1807528 1808595 . - 0 ID=cds-WP_000080044.1;Parent=gene-CCO40_RS08475;Dbxref=GenBank:WP_000080044.1;Name=WP_000080044.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=CCO40_RS08475;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_000080044.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1808592 1809671 . - . ID=gene-CCO40_RS08480;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=CCO40_RS08480;old_locus_tag=CCO40_08480 NZ_CP075116.1 Protein Homology CDS 1808592 1809671 . - 0 ID=cds-WP_000102712.1;Parent=gene-CCO40_RS08480;Dbxref=GenBank:WP_000102712.1;Name=WP_000102712.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=L-histidinol-phosphate:2-oxoglutarate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=CCO40_RS08480;product=histidinol-phosphate transaminase;protein_id=WP_000102712.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1809668 1810972 . - . ID=gene-CCO40_RS08485;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=CCO40_RS08485;old_locus_tag=CCO40_08485 NZ_CP075116.1 Protein Homology CDS 1809668 1810972 . - 0 ID=cds-WP_000009626.1;Parent=gene-CCO40_RS08485;Dbxref=GenBank:WP_000009626.1;Name=WP_000009626.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=CCO40_RS08485;product=histidinol dehydrogenase;protein_id=WP_000009626.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1811075 1811974 . - . ID=gene-CCO40_RS08490;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=CCO40_RS08490;old_locus_tag=CCO40_08490 NZ_CP075116.1 Protein Homology CDS 1811075 1811974 . - 0 ID=cds-WP_000886603.1;Parent=gene-CCO40_RS08490;Dbxref=GenBank:WP_000886603.1;Name=WP_000886603.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=CCO40_RS08490;product=ATP phosphoribosyltransferase;protein_id=WP_000886603.1;transl_table=11 NZ_CP075116.1 cmsearch sequence_feature 1812022 1812145 . - . ID=id-NZ_CP075116.1:1812022..1812145;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00514,COORDINATES: profile:INFERNAL:1.1.5 NZ_CP075116.1 RefSeq gene 1812121 1812171 . - . ID=gene-CCO40_RS08495;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=CCO40_RS08495;old_locus_tag=CCO40_08495 NZ_CP075116.1 Protein Homology CDS 1812121 1812171 . - 0 ID=cds-WP_001364200.1;Parent=gene-CCO40_RS08495;Dbxref=GenBank:WP_001364200.1;Name=WP_001364200.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=CCO40_RS08495;product=his operon leader peptide;protein_id=WP_001364200.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1812334 1813158 . + . ID=gene-CCO40_RS08500;Name=CCO40_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08500;old_locus_tag=CCO40_08500 NZ_CP075116.1 Protein Homology CDS 1812334 1813158 . + 0 ID=cds-WP_000754712.1;Parent=gene-CCO40_RS08500;Dbxref=GenBank:WP_000754712.1;Name=WP_000754712.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461015.1;locus_tag=CCO40_RS08500;product=SDR family oxidoreductase;protein_id=WP_000754712.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1813204 1814118 . + . ID=gene-CCO40_RS08505;Name=CCO40_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08505;old_locus_tag=CCO40_08505 NZ_CP075116.1 Protein Homology CDS 1813204 1814118 . + 0 ID=cds-WP_000803316.1;Parent=gene-CCO40_RS08505;Dbxref=GenBank:WP_000803316.1;Name=WP_000803316.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461014.1;locus_tag=CCO40_RS08505;product=LysR family transcriptional regulator;protein_id=WP_000803316.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1814352 1814414 . + . ID=gene-CCO40_RS08510;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=CCO40_RS08510;old_locus_tag=CCO40_08510 NZ_CP075116.1 Protein Homology CDS 1814352 1814414 . + 0 ID=cds-WP_096335044.1;Parent=gene-CCO40_RS08510;Dbxref=GenBank:WP_096335044.1;Name=WP_096335044.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=CCO40_RS08510;product=membrane protein YoeI;protein_id=WP_096335044.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1814404 1815762 . + . ID=gene-CCO40_RS08515;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=CCO40_RS08515;old_locus_tag=CCO40_08515 NZ_CP075116.1 Protein Homology CDS 1814404 1815762 . + 0 ID=cds-WP_001519005.1;Parent=gene-CCO40_RS08515;Dbxref=GenBank:WP_001519005.1;Name=WP_001519005.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=CCO40_RS08515;product=putrescine/proton symporter PlaP;protein_id=WP_001519005.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1815898 1817328 . - . ID=gene-CCO40_RS08520;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=CCO40_RS08520;old_locus_tag=CCO40_08520 NZ_CP075116.1 Protein Homology CDS 1815898 1817328 . - 0 ID=cds-WP_000216711.1;Parent=gene-CCO40_RS08520;Dbxref=GenBank:WP_000216711.1;Name=WP_000216711.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461012.1;locus_tag=CCO40_RS08520;product=exodeoxyribonuclease I;protein_id=WP_000216711.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1817464 1817541 . + . ID=gene-CCO40_RS22445;Name=CCO40_RS22445;end_range=1817541,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22445;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 1817464 1817541 . + 0 ID=cds-CCO40_RS22445;Parent=gene-CCO40_RS22445;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1817541,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226536.1;locus_tag=CCO40_RS22445;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 1817671 1820019 . - . ID=gene-CCO40_RS08525;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=CCO40_RS08525;old_locus_tag=CCO40_08525 NZ_CP075116.1 Protein Homology CDS 1817671 1820019 . - 0 ID=cds-WP_023170935.1;Parent=gene-CCO40_RS08525;Dbxref=GenBank:WP_023170935.1;Name=WP_023170935.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=CCO40_RS08525;product=SPI-1 type III secretion system effector HECT-type E3 ubiquitin transferase SopA;protein_id=WP_023170935.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1820286 1820378 . + . ID=gene-CCO40_RS08530;Name=CCO40_RS08530;end_range=1820378,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS08530;old_locus_tag=CCO40_08530;partial=true;pseudo=true;start_range=.,1820286 NZ_CP075116.1 Protein Homology CDS 1820286 1820378 . + 0 ID=cds-CCO40_RS08530;Parent=gene-CCO40_RS08530;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1820378,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=CCO40_RS08530;partial=true;product=heavy metal-binding domain-containing protein;pseudo=true;start_range=.,1820286;transl_table=11 NZ_CP075116.1 RefSeq gene 1820638 1822914 . + . ID=gene-CCO40_RS08535;Name=phsA;gbkey=Gene;gene=phsA;gene_biotype=protein_coding;locus_tag=CCO40_RS08535;old_locus_tag=CCO40_08535 NZ_CP075116.1 Protein Homology CDS 1820638 1822914 . + 0 ID=cds-WP_000028228.1;Parent=gene-CCO40_RS08535;Dbxref=GenBank:WP_000028228.1;Name=WP_000028228.1;Ontology_term=GO:0016491,GO:0043546,GO:0051539;gbkey=CDS;gene=phsA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461010.1;locus_tag=CCO40_RS08535;product=thiosulfate reductase PhsA;protein_id=WP_000028228.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1822929 1823507 . + . ID=gene-CCO40_RS08540;Name=phsB;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=CCO40_RS08540;old_locus_tag=CCO40_08540 NZ_CP075116.1 Protein Homology CDS 1822929 1823507 . + 0 ID=cds-WP_001016238.1;Parent=gene-CCO40_RS08540;Dbxref=GenBank:WP_001016238.1;Name=WP_001016238.1;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461009.1;locus_tag=CCO40_RS08540;product=thiosulfate reductase electron transport protein PhsB;protein_id=WP_001016238.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1823504 1824268 . + . ID=gene-CCO40_RS08545;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=CCO40_RS08545;old_locus_tag=CCO40_08545 NZ_CP075116.1 Protein Homology CDS 1823504 1824268 . + 0 ID=cds-WP_001092553.1;Parent=gene-CCO40_RS08545;Dbxref=GenBank:WP_001092553.1;Name=WP_001092553.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461008.1;locus_tag=CCO40_RS08545;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_001092553.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1824392 1825564 . + . ID=gene-CCO40_RS08550;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=CCO40_RS08550;old_locus_tag=CCO40_08550 NZ_CP075116.1 Protein Homology CDS 1824392 1825564 . + 0 ID=cds-WP_000925042.1;Parent=gene-CCO40_RS08550;Dbxref=GenBank:WP_000925042.1;Name=WP_000925042.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=CCO40_RS08550;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_000925042.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1825717 1826184 . + . ID=gene-CCO40_RS08555;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=CCO40_RS08555;old_locus_tag=CCO40_08555 NZ_CP075116.1 Protein Homology CDS 1825717 1826184 . + 0 ID=cds-WP_000384326.1;Parent=gene-CCO40_RS08555;Dbxref=GenBank:WP_000384326.1;Name=WP_000384326.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461006.1;locus_tag=CCO40_RS08555;product=DNA gyrase inhibitor SbmC;protein_id=WP_000384326.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1826303 1827361 . + . ID=gene-CCO40_RS08560;Name=CCO40_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08560;old_locus_tag=CCO40_08560 NZ_CP075116.1 Protein Homology CDS 1826303 1827361 . + 0 ID=cds-WP_001200854.1;Parent=gene-CCO40_RS08560;Dbxref=GenBank:WP_001200854.1;Name=WP_001200854.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461005.1;locus_tag=CCO40_RS08560;product=FUSC family protein;protein_id=WP_001200854.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1827606 1827941 . + . ID=gene-CCO40_RS08565;Name=CCO40_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08565;old_locus_tag=CCO40_08565 NZ_CP075116.1 Protein Homology CDS 1827606 1827941 . + 0 ID=cds-WP_000450405.1;Parent=gene-CCO40_RS08565;Dbxref=GenBank:WP_000450405.1;Name=WP_000450405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461004.1;locus_tag=CCO40_RS08565;product=DUF496 family protein;protein_id=WP_000450405.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1827975 1828841 . - . ID=gene-CCO40_RS08570;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=CCO40_RS08570;old_locus_tag=CCO40_08570 NZ_CP075116.1 Protein Homology CDS 1827975 1828841 . - 0 ID=cds-WP_139377218.1;Parent=gene-CCO40_RS08570;Dbxref=GenBank:WP_139377218.1;Name=WP_139377218.1;gbkey=CDS;gene=pduX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=CCO40_RS08570;product=L-threonine kinase PduX;protein_id=WP_139377218.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1828935 1830149 . - . ID=gene-CCO40_RS08575;Name=pduW;gbkey=Gene;gene=pduW;gene_biotype=protein_coding;locus_tag=CCO40_RS08575;old_locus_tag=CCO40_08575 NZ_CP075116.1 Protein Homology CDS 1828935 1830149 . - 0 ID=cds-WP_000120653.1;Parent=gene-CCO40_RS08575;Dbxref=GenBank:WP_000120653.1;Name=WP_000120653.1;gbkey=CDS;gene=pduW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=CCO40_RS08575;product=propanediol utilization propionate kinase PduW;protein_id=WP_000120653.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1830134 1830586 . - . ID=gene-CCO40_RS08580;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=CCO40_RS08580;old_locus_tag=CCO40_08580 NZ_CP075116.1 Protein Homology CDS 1830134 1830586 . - 0 ID=cds-WP_000826277.1;Parent=gene-CCO40_RS08580;Dbxref=GenBank:WP_000826277.1;Name=WP_000826277.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=CCO40_RS08580;product=propanediol utilization protein PduV;protein_id=WP_000826277.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1830591 1830941 . - . ID=gene-CCO40_RS08585;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=CCO40_RS08585;old_locus_tag=CCO40_08585 NZ_CP075116.1 Protein Homology CDS 1830591 1830941 . - 0 ID=cds-WP_000441103.1;Parent=gene-CCO40_RS08585;Dbxref=GenBank:WP_000441103.1;Name=WP_000441103.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461000.1;locus_tag=CCO40_RS08585;product=propanediol utilization microcompartment protein PduU;protein_id=WP_000441103.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1830941 1831495 . - . ID=gene-CCO40_RS08590;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=CCO40_RS08590;old_locus_tag=CCO40_08590 NZ_CP075116.1 Protein Homology CDS 1830941 1831495 . - 0 ID=cds-WP_000075772.1;Parent=gene-CCO40_RS08590;Dbxref=GenBank:WP_000075772.1;Name=WP_000075772.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=CCO40_RS08590;product=propanediol utilization microcompartment protein PduT;protein_id=WP_000075772.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1831498 1832853 . - . ID=gene-CCO40_RS08595;Name=pduS;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=CCO40_RS08595;old_locus_tag=CCO40_08595 NZ_CP075116.1 Protein Homology CDS 1831498 1832853 . - 0 ID=cds-WP_094889173.1;Parent=gene-CCO40_RS08595;Dbxref=GenBank:WP_094889173.1;Name=WP_094889173.1;gbkey=CDS;gene=pduS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=CCO40_RS08595;product=cobalamin reductase PduS;protein_id=WP_094889173.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1832850 1833962 . - . ID=gene-CCO40_RS08600;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=CCO40_RS08600;old_locus_tag=CCO40_08600 NZ_CP075116.1 Protein Homology CDS 1832850 1833962 . - 0 ID=cds-WP_094889172.1;Parent=gene-CCO40_RS08600;Dbxref=GenBank:WP_094889172.1;Name=WP_094889172.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460997.1;locus_tag=CCO40_RS08600;product=1-propanol dehydrogenase PduQ;protein_id=WP_094889172.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1833974 1835368 . - . ID=gene-CCO40_RS08605;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=CCO40_RS08605;old_locus_tag=CCO40_08605 NZ_CP075116.1 Protein Homology CDS 1833974 1835368 . - 0 ID=cds-WP_094889171.1;Parent=gene-CCO40_RS08605;Dbxref=GenBank:WP_094889171.1;Name=WP_094889171.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=CCO40_RS08605;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=WP_094889171.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1835365 1836375 . - . ID=gene-CCO40_RS08610;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=protein_coding;locus_tag=CCO40_RS08610;old_locus_tag=CCO40_08610 NZ_CP075116.1 Protein Homology CDS 1835365 1836375 . - 0 ID=cds-WP_001808095.1;Parent=gene-CCO40_RS08610;Dbxref=GenBank:WP_001808095.1;Name=WP_001808095.1;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460995.1;locus_tag=CCO40_RS08610;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;protein_id=WP_001808095.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1836385 1836660 . - . ID=gene-CCO40_RS08615;Name=pduN;gbkey=Gene;gene=pduN;gene_biotype=protein_coding;locus_tag=CCO40_RS08615;old_locus_tag=CCO40_08615 NZ_CP075116.1 Protein Homology CDS 1836385 1836660 . - 0 ID=cds-WP_000549824.1;Parent=gene-CCO40_RS08615;Dbxref=GenBank:WP_000549824.1;Name=WP_000549824.1;gbkey=CDS;gene=pduN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460994.1;locus_tag=CCO40_RS08615;product=propanediol utilization microcompartment protein PduN;protein_id=WP_000549824.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1836664 1837155 . - . ID=gene-CCO40_RS08620;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=CCO40_RS08620;old_locus_tag=CCO40_08620 NZ_CP075116.1 Protein Homology CDS 1836664 1837155 . - 0 ID=cds-WP_001808105.1;Parent=gene-CCO40_RS08620;Dbxref=GenBank:WP_001808105.1;Name=WP_001808105.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=CCO40_RS08620;product=propanediol utilization microcompartment protein PduM;protein_id=WP_001808105.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1837152 1837784 . - . ID=gene-CCO40_RS08625;Name=CCO40_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08625;old_locus_tag=CCO40_08625 NZ_CP075116.1 Protein Homology CDS 1837152 1837784 . - 0 ID=cds-WP_017465521.1;Parent=gene-CCO40_RS08625;Dbxref=GenBank:WP_017465521.1;Name=WP_017465521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460992.1;locus_tag=CCO40_RS08625;product=phosphate propanoyltransferase;protein_id=WP_017465521.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1837784 1838266 . - . ID=gene-CCO40_RS08630;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=protein_coding;locus_tag=CCO40_RS08630;old_locus_tag=CCO40_08630 NZ_CP075116.1 Protein Homology CDS 1837784 1838266 . - 0 ID=cds-WP_077909254.1;Parent=gene-CCO40_RS08630;Dbxref=GenBank:WP_077909254.1;Name=WP_077909254.1;gbkey=CDS;gene=pduK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=CCO40_RS08630;product=propanediol utilization microcompartment protein PduK;protein_id=WP_077909254.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1838270 1838545 . - . ID=gene-CCO40_RS08635;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=CCO40_RS08635;old_locus_tag=CCO40_08635 NZ_CP075116.1 Protein Homology CDS 1838270 1838545 . - 0 ID=cds-WP_001057755.1;Parent=gene-CCO40_RS08635;Dbxref=GenBank:WP_001057755.1;Name=WP_001057755.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460990.1;locus_tag=CCO40_RS08635;product=propanediol utilization microcompartment protein PduJ;protein_id=WP_001057755.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1838564 1838914 . - . ID=gene-CCO40_RS08640;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=CCO40_RS08640;old_locus_tag=CCO40_08640 NZ_CP075116.1 Protein Homology CDS 1838564 1838914 . - 0 ID=cds-WP_000377961.1;Parent=gene-CCO40_RS08640;Dbxref=GenBank:WP_000377961.1;Name=WP_000377961.1;gbkey=CDS;gene=pduH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460989.1;locus_tag=CCO40_RS08640;product=propanediol dehydratase reactivase beta subunit PduH;protein_id=WP_000377961.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1838904 1840736 . - . ID=gene-CCO40_RS08645;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=protein_coding;locus_tag=CCO40_RS08645;old_locus_tag=CCO40_08645 NZ_CP075116.1 Protein Homology CDS 1838904 1840736 . - 0 ID=cds-WP_094889170.1;Parent=gene-CCO40_RS08645;Dbxref=GenBank:WP_094889170.1;Name=WP_094889170.1;gbkey=CDS;gene=pduG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=CCO40_RS08645;product=propanediol dehydratase reactivase alpha subunit PduG;protein_id=WP_094889170.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1840752 1841273 . - . ID=gene-CCO40_RS08650;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=CCO40_RS08650;old_locus_tag=CCO40_08650 NZ_CP075116.1 Protein Homology CDS 1840752 1841273 . - 0 ID=cds-WP_001090600.1;Parent=gene-CCO40_RS08650;Dbxref=GenBank:WP_001090600.1;Name=WP_001090600.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=CCO40_RS08650;product=propanediol dehydratase small subunit PduE;protein_id=WP_001090600.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1841288 1841962 . - . ID=gene-CCO40_RS08655;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=CCO40_RS08655;old_locus_tag=CCO40_08655 NZ_CP075116.1 Protein Homology CDS 1841288 1841962 . - 0 ID=cds-WP_000405052.1;Parent=gene-CCO40_RS08655;Dbxref=GenBank:WP_000405052.1;Name=WP_000405052.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=CCO40_RS08655;product=propanediol dehydratase medium subunit PduD;protein_id=WP_000405052.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1841973 1843637 . - . ID=gene-CCO40_RS08660;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=CCO40_RS08660;old_locus_tag=CCO40_08660 NZ_CP075116.1 Protein Homology CDS 1841973 1843637 . - 0 ID=cds-WP_001256896.1;Parent=gene-CCO40_RS08660;Dbxref=GenBank:WP_001256896.1;Name=WP_001256896.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=CCO40_RS08660;product=propanediol dehydratase large subunit PduC;protein_id=WP_001256896.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1843656 1844468 . - . ID=gene-CCO40_RS08665;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=CCO40_RS08665;old_locus_tag=CCO40_08665 NZ_CP075116.1 Protein Homology CDS 1843656 1844468 . - 0 ID=cds-WP_000097497.1;Parent=gene-CCO40_RS08665;Dbxref=GenBank:WP_000097497.1;Name=WP_000097497.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=CCO40_RS08665;product=propanediol utilization microcompartment protein PduB;protein_id=WP_000097497.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1844465 1844749 . - . ID=gene-CCO40_RS08670;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=CCO40_RS08670;old_locus_tag=CCO40_08670 NZ_CP075116.1 Protein Homology CDS 1844465 1844749 . - 0 ID=cds-WP_001183618.1;Parent=gene-CCO40_RS08670;Dbxref=GenBank:WP_001183618.1;Name=WP_001183618.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460983.1;locus_tag=CCO40_RS08670;product=propanediol utilization microcompartment protein PduA;protein_id=WP_001183618.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1845274 1846068 . + . ID=gene-CCO40_RS08675;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=CCO40_RS08675;old_locus_tag=CCO40_08675 NZ_CP075116.1 Protein Homology CDS 1845274 1846068 . + 0 ID=cds-WP_001000023.1;Parent=gene-CCO40_RS08675;Dbxref=GenBank:WP_001000023.1;Name=WP_001000023.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=CCO40_RS08675;product=propanediol diffusion facilitator PduF;protein_id=WP_001000023.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1846285 1847196 . + . ID=gene-CCO40_RS08680;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=CCO40_RS08680;old_locus_tag=CCO40_08680 NZ_CP075116.1 Protein Homology CDS 1846285 1847196 . + 0 ID=cds-WP_000622326.1;Parent=gene-CCO40_RS08680;Dbxref=GenBank:WP_000622326.1;Name=WP_000622326.1;Ontology_term=GO:0009236,GO:0051144,GO:0003700,GO:0043565;gbkey=CDS;gene=pocR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,1%2C2-propanediol catabolic process|0051144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=CCO40_RS08680;product=transcriptional regulator PocR;protein_id=WP_000622326.1;transl_table=11 NZ_CP075116.1 cmsearch riboswitch 1847522 1847696 . + . ID=id-NZ_CP075116.1:1847522..1847696;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00174,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CP075116.1 RefSeq gene 1847794 1849173 . + . ID=gene-CCO40_RS08685;Name=CCO40_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08685;old_locus_tag=CCO40_08685 NZ_CP075116.1 Protein Homology CDS 1847794 1849173 . + 0 ID=cds-WP_000741254.1;Parent=gene-CCO40_RS08685;Dbxref=GenBank:WP_000741254.1;Name=WP_000741254.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=CCO40_RS08685;product=cobyrinic acid a%2Cc-diamide synthase CobB;protein_id=WP_000741254.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1849170 1850129 . + . ID=gene-CCO40_RS08690;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=CCO40_RS08690;old_locus_tag=CCO40_08690 NZ_CP075116.1 Protein Homology CDS 1849170 1850129 . + 0 ID=cds-WP_000153643.1;Parent=gene-CCO40_RS08690;Dbxref=GenBank:WP_000153643.1;Name=WP_000153643.1;Ontology_term=GO:0009236,GO:0048472,GO:0016020;gbkey=CDS;gene=cbiB;go_component=membrane|0016020||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=CCO40_RS08690;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WP_000153643.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1850140 1850772 . + . ID=gene-CCO40_RS08695;Name=CCO40_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08695;old_locus_tag=CCO40_08695 NZ_CP075116.1 Protein Homology CDS 1850140 1850772 . + 0 ID=cds-WP_000558987.1;Parent=gene-CCO40_RS08695;Dbxref=GenBank:WP_000558987.1;Name=WP_000558987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=CCO40_RS08695;product=cobalt-precorrin-8 methylmutase;protein_id=WP_000558987.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1850772 1851911 . + . ID=gene-CCO40_RS08700;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=CCO40_RS08700;old_locus_tag=CCO40_08700 NZ_CP075116.1 Protein Homology CDS 1850772 1851911 . + 0 ID=cds-WP_001292911.1;Parent=gene-CCO40_RS08700;Dbxref=GenBank:WP_001292911.1;Name=WP_001292911.1;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=CCO40_RS08700;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;protein_id=WP_001292911.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1851905 1852510 . + . ID=gene-CCO40_RS08705;Name=CCO40_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08705;old_locus_tag=CCO40_08705 NZ_CP075116.1 Protein Homology CDS 1851905 1852510 . + 0 ID=cds-WP_000958835.1;Parent=gene-CCO40_RS08705;Dbxref=GenBank:WP_000958835.1;Name=WP_000958835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460976.1;locus_tag=CCO40_RS08705;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=WP_000958835.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1852500 1853078 . + . ID=gene-CCO40_RS08710;Name=CCO40_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08710;old_locus_tag=CCO40_08710 NZ_CP075116.1 Protein Homology CDS 1852500 1853078 . + 0 ID=cds-WP_000650985.1;Parent=gene-CCO40_RS08710;Dbxref=GenBank:WP_000650985.1;Name=WP_000650985.1;Ontology_term=GO:0009236,GO:0008276;gbkey=CDS;go_function=protein methyltransferase activity|0008276||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460975.1;locus_tag=CCO40_RS08710;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WP_000650985.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1853062 1853835 . + . ID=gene-CCO40_RS08715;Name=CCO40_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08715;old_locus_tag=CCO40_08715 NZ_CP075116.1 Protein Homology CDS 1853062 1853835 . + 0 ID=cds-WP_000004866.1;Parent=gene-CCO40_RS08715;Dbxref=GenBank:WP_000004866.1;Name=WP_000004866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460974.1;locus_tag=CCO40_RS08715;product=cobalt-precorrin-4 methyltransferase;protein_id=WP_000004866.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1853816 1854871 . + . ID=gene-CCO40_RS08720;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=CCO40_RS08720;old_locus_tag=CCO40_08720 NZ_CP075116.1 Protein Homology CDS 1853816 1854871 . + 0 ID=cds-WP_001098927.1;Parent=gene-CCO40_RS08720;Dbxref=GenBank:WP_001098927.1;Name=WP_001098927.1;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=CCO40_RS08720;product=cobalt-precorrin 5A hydrolase;protein_id=WP_001098927.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1854871 1855596 . + . ID=gene-CCO40_RS08725;Name=CCO40_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08725;old_locus_tag=CCO40_08725 NZ_CP075116.1 Protein Homology CDS 1854871 1855596 . + 0 ID=cds-WP_000953638.1;Parent=gene-CCO40_RS08725;Dbxref=GenBank:WP_000953638.1;Name=WP_000953638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460972.1;locus_tag=CCO40_RS08725;product=precorrin-3B C(17)-methyltransferase;protein_id=WP_000953638.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1855593 1856384 . + . ID=gene-CCO40_RS08730;Name=CCO40_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08730;old_locus_tag=CCO40_08730 NZ_CP075116.1 Protein Homology CDS 1855593 1856384 . + 0 ID=cds-WP_001001983.1;Parent=gene-CCO40_RS08730;Dbxref=GenBank:WP_001001983.1;Name=WP_001001983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460971.1;locus_tag=CCO40_RS08730;product=cobalt-precorrin-6A reductase;protein_id=WP_001001983.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1856387 1857181 . + . ID=gene-CCO40_RS08735;Name=cbiK;gbkey=Gene;gene=cbiK;gene_biotype=protein_coding;locus_tag=CCO40_RS08735;old_locus_tag=CCO40_08735 NZ_CP075116.1 Protein Homology CDS 1856387 1857181 . + 0 ID=cds-WP_000709777.1;Parent=gene-CCO40_RS08735;Dbxref=GenBank:WP_000709777.1;Name=WP_000709777.1;Ontology_term=GO:0006779,GO:0016852,GO:0046906;gbkey=CDS;gene=cbiK;go_function=sirohydrochlorin cobaltochelatase activity|0016852||IEA,tetrapyrrole binding|0046906||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=CCO40_RS08735;product=sirohydrochlorin cobaltochelatase;protein_id=WP_000709777.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1857178 1857891 . + . ID=gene-CCO40_RS08740;Name=CCO40_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08740;old_locus_tag=CCO40_08740 NZ_CP075116.1 Protein Homology CDS 1857178 1857891 . + 0 ID=cds-WP_001013555.1;Parent=gene-CCO40_RS08740;Dbxref=GenBank:WP_001013555.1;Name=WP_001013555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460969.1;locus_tag=CCO40_RS08740;product=cobalt-factor II C(20)-methyltransferase;protein_id=WP_001013555.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1857888 1858625 . + . ID=gene-CCO40_RS08745;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=CCO40_RS08745;old_locus_tag=CCO40_08745 NZ_CP075116.1 Protein Homology CDS 1857888 1858625 . + 0 ID=cds-WP_000764336.1;Parent=gene-CCO40_RS08745;Dbxref=GenBank:WP_000764336.1;Name=WP_000764336.1;Ontology_term=GO:0006824,GO:0009236,GO:0016020,GO:0043190;gbkey=CDS;gene=cbiM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=CCO40_RS08745;product=cobalt ECF transporter S component CbiM;protein_id=WP_000764336.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1858627 1858920 . + . ID=gene-CCO40_RS08750;Name=CCO40_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08750;old_locus_tag=CCO40_08750 NZ_CP075116.1 Protein Homology CDS 1858627 1858920 . + 0 ID=cds-WP_000753209.1;Parent=gene-CCO40_RS08750;Dbxref=GenBank:WP_000753209.1;Name=WP_000753209.1;Ontology_term=GO:0006824,GO:0009236,GO:0015087,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460967.1;locus_tag=CCO40_RS08750;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=WP_000753209.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1858907 1859584 . + . ID=gene-CCO40_RS08755;Name=CCO40_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08755;old_locus_tag=CCO40_08755 NZ_CP075116.1 Protein Homology CDS 1858907 1859584 . + 0 ID=cds-WP_000147127.1;Parent=gene-CCO40_RS08755;Dbxref=GenBank:WP_000147127.1;Name=WP_000147127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460966.1;locus_tag=CCO40_RS08755;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=WP_000147127.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1859593 1860408 . + . ID=gene-CCO40_RS08760;Name=CCO40_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08760;old_locus_tag=CCO40_08760 NZ_CP075116.1 Protein Homology CDS 1859593 1860408 . + 0 ID=cds-WP_000881540.1;Parent=gene-CCO40_RS08760;Dbxref=GenBank:WP_000881540.1;Name=WP_000881540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460965.1;locus_tag=CCO40_RS08760;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_000881540.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1860405 1861925 . + . ID=gene-CCO40_RS08765;Name=CCO40_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08765;old_locus_tag=CCO40_08765 NZ_CP075116.1 Protein Homology CDS 1860405 1861925 . + 0 ID=cds-WP_000189653.1;Parent=gene-CCO40_RS08765;Dbxref=GenBank:WP_000189653.1;Name=WP_000189653.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460964.1;locus_tag=CCO40_RS08765;product=cobyric acid synthase;protein_id=WP_000189653.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1861922 1862467 . + . ID=gene-CCO40_RS08770;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=CCO40_RS08770;old_locus_tag=CCO40_08770 NZ_CP075116.1 Protein Homology CDS 1861922 1862467 . + 0 ID=cds-WP_000973192.1;Parent=gene-CCO40_RS08770;Dbxref=GenBank:WP_000973192.1;Name=WP_000973192.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460963.1;locus_tag=CCO40_RS08770;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_000973192.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1862464 1863207 . + . ID=gene-CCO40_RS08775;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=CCO40_RS08775;old_locus_tag=CCO40_08775 NZ_CP075116.1 Protein Homology CDS 1862464 1863207 . + 0 ID=cds-WP_000040003.1;Parent=gene-CCO40_RS08775;Dbxref=GenBank:WP_000040003.1;Name=WP_000040003.1;Ontology_term=GO:0009236,GO:0008818,GO:0051073;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA,adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460962.1;locus_tag=CCO40_RS08775;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_000040003.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1863234 1864304 . + . ID=gene-CCO40_RS08780;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=CCO40_RS08780;old_locus_tag=CCO40_08780 NZ_CP075116.1 Protein Homology CDS 1863234 1864304 . + 0 ID=cds-WP_001649922.1;Parent=gene-CCO40_RS08780;Dbxref=GenBank:WP_001649922.1;Name=WP_001649922.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=CCO40_RS08780;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_001649922.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1864382 1865311 . + . ID=gene-CCO40_RS08785;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;gene_synonym=erfK;locus_tag=CCO40_RS08785;old_locus_tag=CCO40_08785 NZ_CP075116.1 Protein Homology CDS 1864382 1865311 . + 0 ID=cds-WP_001252828.1;Parent=gene-CCO40_RS08785;Dbxref=GenBank:WP_001252828.1;Name=WP_001252828.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=CCO40_RS08785;product=L%2CD-transpeptidase;protein_id=WP_001252828.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1865537 1865612 . - . ID=gene-CCO40_RS08790;Name=CCO40_RS08790;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS08790;old_locus_tag=CCO40_08790 NZ_CP075116.1 tRNAscan-SE tRNA 1865537 1865612 . - . ID=rna-CCO40_RS08790;Parent=gene-CCO40_RS08790;anticodon=(pos:complement(1865577..1865579));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS08790;product=tRNA-Asn NZ_CP075116.1 tRNAscan-SE exon 1865537 1865612 . - . ID=exon-CCO40_RS08790-1;Parent=rna-CCO40_RS08790;anticodon=(pos:complement(1865577..1865579));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS08790;product=tRNA-Asn NZ_CP075116.1 RefSeq gene 1865772 1867229 . + . ID=gene-CCO40_RS08795;Name=CCO40_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08795;old_locus_tag=CCO40_08795 NZ_CP075116.1 Protein Homology CDS 1865772 1867229 . + 0 ID=cds-WP_094889169.1;Parent=gene-CCO40_RS08795;Dbxref=GenBank:WP_094889169.1;Name=WP_094889169.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460959.1;locus_tag=CCO40_RS08795;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WP_094889169.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1867369 1867444 . + . ID=gene-CCO40_RS08800;Name=CCO40_RS08800;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS08800;old_locus_tag=CCO40_08800 NZ_CP075116.1 tRNAscan-SE tRNA 1867369 1867444 . + . ID=rna-CCO40_RS08800;Parent=gene-CCO40_RS08800;anticodon=(pos:1867402..1867404);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS08800;product=tRNA-Asn NZ_CP075116.1 tRNAscan-SE exon 1867369 1867444 . + . ID=exon-CCO40_RS08800-1;Parent=rna-CCO40_RS08800;anticodon=(pos:1867402..1867404);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS08800;product=tRNA-Asn NZ_CP075116.1 RefSeq pseudogene 1867864 1868327 . + . ID=gene-CCO40_RS08805;Name=CCO40_RS08805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS08805;old_locus_tag=CCO40_08805;pseudo=true NZ_CP075116.1 Protein Homology CDS 1867864 1868327 . + 0 ID=cds-CCO40_RS08805;Parent=gene-CCO40_RS08805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211098.1;locus_tag=CCO40_RS08805;product=STM2901 family protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 1868321 1868647 . + . ID=gene-CCO40_RS08810;Name=CCO40_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08810;old_locus_tag=CCO40_08810 NZ_CP075116.1 Protein Homology CDS 1868321 1868647 . + 0 ID=cds-WP_000228159.1;Parent=gene-CCO40_RS08810;Dbxref=GenBank:WP_000228159.1;Name=WP_000228159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460958.1;locus_tag=CCO40_RS08810;product=DUF1493 family protein;protein_id=WP_000228159.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1868636 1868797 . - . ID=gene-CCO40_RS08815;Name=CCO40_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08815;old_locus_tag=CCO40_08815 NZ_CP075116.1 Protein Homology CDS 1868636 1868797 . - 0 ID=cds-WP_023888257.1;Parent=gene-CCO40_RS08815;Dbxref=GenBank:WP_023888257.1;Name=WP_023888257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448416.1;locus_tag=CCO40_RS08815;product=hypothetical protein;protein_id=WP_023888257.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1868843 1870297 . + . ID=gene-CCO40_RS08820;Name=CCO40_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08820;old_locus_tag=CCO40_08820 NZ_CP075116.1 Protein Homology CDS 1868843 1870297 . + 0 ID=cds-WP_000428197.1;Parent=gene-CCO40_RS08820;Dbxref=GenBank:WP_000428197.1;Name=WP_000428197.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460956.1;locus_tag=CCO40_RS08820;product=AMP nucleosidase;protein_id=WP_000428197.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1870820 1870993 . - . ID=gene-CCO40_RS08825;Name=CCO40_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08825;old_locus_tag=CCO40_08825 NZ_CP075116.1 Protein Homology CDS 1870820 1870993 . - 0 ID=cds-WP_000957535.1;Parent=gene-CCO40_RS08825;Dbxref=GenBank:WP_000957535.1;Name=WP_000957535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957538.1;locus_tag=CCO40_RS08825;product=hypothetical protein;protein_id=WP_000957535.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1871041 1871145 . + . ID=gene-CCO40_RS08830;Name=CCO40_RS08830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS08830;old_locus_tag=CCO40_08830;partial=true;pseudo=true;start_range=.,1871041 NZ_CP075116.1 Protein Homology CDS 1871041 1871145 . + 0 ID=cds-CCO40_RS08830;Parent=gene-CCO40_RS08830;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=CCO40_RS08830;partial=true;product=nucleotide-binding YajQ family protein;pseudo=true;start_range=.,1871041;transl_table=11 NZ_CP075116.1 RefSeq gene 1871203 1872933 . - . ID=gene-CCO40_RS08835;Name=CCO40_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08835;old_locus_tag=CCO40_08835 NZ_CP075116.1 Protein Homology CDS 1871203 1872933 . - 0 ID=cds-WP_000669108.1;Parent=gene-CCO40_RS08835;Dbxref=GenBank:WP_000669108.1;Name=WP_000669108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460955.1;locus_tag=CCO40_RS08835;product=hypothetical protein;protein_id=WP_000669108.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1872990 1874684 . - . ID=gene-CCO40_RS08840;Name=CCO40_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08840;old_locus_tag=CCO40_08840 NZ_CP075116.1 Protein Homology CDS 1872990 1874684 . - 0 ID=cds-WP_077904895.1;Parent=gene-CCO40_RS08840;Dbxref=GenBank:WP_077904895.1;Name=WP_077904895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460954.1;locus_tag=CCO40_RS08840;product=SEL1-like repeat protein;protein_id=WP_077904895.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1875368 1875646 . - . ID=gene-CCO40_RS08845;Name=CCO40_RS08845;end_range=1875646,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS08845;old_locus_tag=CCO40_08845;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 1875368 1875646 . - 0 ID=cds-CCO40_RS08845;Parent=gene-CCO40_RS08845;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1875646,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950586.1;locus_tag=CCO40_RS08845;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1875732 1876199 . - . ID=gene-CCO40_RS08850;Name=CCO40_RS08850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS08850;old_locus_tag=CCO40_08850;partial=true;pseudo=true;start_range=.,1875732 NZ_CP075116.1 Protein Homology CDS 1875732 1876199 . - 0 ID=cds-CCO40_RS08850;Parent=gene-CCO40_RS08850;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517119.1;locus_tag=CCO40_RS08850;partial=true;product=phage integrase N-terminal domain-containing protein;pseudo=true;start_range=.,1875732;transl_table=11 NZ_CP075116.1 RefSeq gene 1876674 1877147 . - . ID=gene-CCO40_RS08855;Name=CCO40_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08855;old_locus_tag=CCO40_08855 NZ_CP075116.1 Protein Homology CDS 1876674 1877147 . - 0 ID=cds-WP_001219015.1;Parent=gene-CCO40_RS08855;Dbxref=GenBank:WP_001219015.1;Name=WP_001219015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460952.1;locus_tag=CCO40_RS08855;product=peptidase;protein_id=WP_001219015.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1877310 1877385 . - . ID=gene-CCO40_RS08860;Name=CCO40_RS08860;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS08860;old_locus_tag=CCO40_08860 NZ_CP075116.1 tRNAscan-SE tRNA 1877310 1877385 . - . ID=rna-CCO40_RS08860;Parent=gene-CCO40_RS08860;anticodon=(pos:complement(1877350..1877352));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS08860;product=tRNA-Asn NZ_CP075116.1 tRNAscan-SE exon 1877310 1877385 . - . ID=exon-CCO40_RS08860-1;Parent=rna-CCO40_RS08860;anticodon=(pos:complement(1877350..1877352));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS08860;product=tRNA-Asn NZ_CP075116.1 RefSeq pseudogene 1877807 1878112 . - . ID=gene-CCO40_RS08865;Name=CCO40_RS08865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS08865;old_locus_tag=CCO40_08865;partial=true;pseudo=true;start_range=.,1877807 NZ_CP075116.1 Protein Homology CDS 1877807 1878112 . - 0 ID=cds-CCO40_RS08865;Parent=gene-CCO40_RS08865;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=CCO40_RS08865;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;start_range=.,1877807;transl_table=11 NZ_CP075116.1 RefSeq gene 1878280 1878355 . - . ID=gene-CCO40_RS08870;Name=CCO40_RS08870;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS08870;old_locus_tag=CCO40_08870 NZ_CP075116.1 tRNAscan-SE tRNA 1878280 1878355 . - . ID=rna-CCO40_RS08870;Parent=gene-CCO40_RS08870;anticodon=(pos:complement(1878320..1878322));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS08870;product=tRNA-Asn NZ_CP075116.1 tRNAscan-SE exon 1878280 1878355 . - . ID=exon-CCO40_RS08870-1;Parent=rna-CCO40_RS08870;anticodon=(pos:complement(1878320..1878322));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS08870;product=tRNA-Asn NZ_CP075116.1 RefSeq gene 1878456 1879253 . - . ID=gene-CCO40_RS08875;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=CCO40_RS08875;old_locus_tag=CCO40_08875 NZ_CP075116.1 Protein Homology CDS 1878456 1879253 . - 0 ID=cds-WP_000598920.1;Parent=gene-CCO40_RS08875;Dbxref=GenBank:WP_000598920.1;Name=WP_000598920.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460951.1;locus_tag=CCO40_RS08875;product=DgsA anti-repressor MtfA;protein_id=WP_000598920.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1879342 1879431 . + . ID=gene-CCO40_RS08880;Name=CCO40_RS08880;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS08880;old_locus_tag=CCO40_08880 NZ_CP075116.1 tRNAscan-SE tRNA 1879342 1879431 . + . ID=rna-CCO40_RS08880;Parent=gene-CCO40_RS08880;anticodon=(pos:1879376..1879378);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS08880;product=tRNA-Ser NZ_CP075116.1 tRNAscan-SE exon 1879342 1879431 . + . ID=exon-CCO40_RS08880-1;Parent=rna-CCO40_RS08880;anticodon=(pos:1879376..1879378);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS08880;product=tRNA-Ser NZ_CP075116.1 RefSeq gene 1880022 1880441 . + . ID=gene-CCO40_RS08890;Name=CCO40_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08890;old_locus_tag=CCO40_08890 NZ_CP075116.1 Protein Homology CDS 1880022 1880441 . + 0 ID=cds-WP_000394197.1;Parent=gene-CCO40_RS08890;Dbxref=GenBank:WP_000394197.1;Name=WP_000394197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460949.1;locus_tag=CCO40_RS08890;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_000394197.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1880444 1881712 . + . ID=gene-CCO40_RS08895;Name=CCO40_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08895;old_locus_tag=CCO40_08895 NZ_CP075116.1 Protein Homology CDS 1880444 1881712 . + 0 ID=cds-WP_000457663.1;Parent=gene-CCO40_RS08895;Dbxref=GenBank:WP_000457663.1;Name=WP_000457663.1;Ontology_term=GO:0006974,GO:0009432,GO:0019985,GO:0042276,GO:0003684,GO:0003887;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA damage response|0006974||IEA,SOS response|0009432||IEA,translesion synthesis|0019985||IEA,error-prone translesion synthesis|0042276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=CCO40_RS08895;product=Y-family DNA polymerase;protein_id=WP_000457663.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1882167 1882379 . + . ID=gene-CCO40_RS08900;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO40_RS08900;old_locus_tag=CCO40_08900 NZ_CP075116.1 Protein Homology CDS 1882167 1882379 . + 0 ID=cds-WP_000208509.1;Parent=gene-CCO40_RS08900;Dbxref=GenBank:WP_000208509.1;Name=WP_000208509.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460947.1;locus_tag=CCO40_RS08900;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000208509.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1882390 1882578 . + . ID=gene-CCO40_RS08905;Name=ymcF;gbkey=Gene;gene=ymcF;gene_biotype=protein_coding;locus_tag=CCO40_RS08905;old_locus_tag=CCO40_08905 NZ_CP075116.1 Protein Homology CDS 1882390 1882578 . + 0 ID=cds-WP_024131109.1;Parent=gene-CCO40_RS08905;Dbxref=GenBank:WP_024131109.1;Name=WP_024131109.1;gbkey=CDS;gene=ymcF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=CCO40_RS08905;product=cold shock small protein YmcF;protein_id=WP_024131109.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1882839 1884017 . - . ID=gene-CCO40_RS08910;Name=ompS1;gbkey=Gene;gene=ompS1;gene_biotype=protein_coding;locus_tag=CCO40_RS08910;old_locus_tag=CCO40_08910 NZ_CP075116.1 Protein Homology CDS 1882839 1884017 . - 0 ID=cds-WP_001080668.1;Parent=gene-CCO40_RS08910;Dbxref=GenBank:WP_001080668.1;Name=WP_001080668.1;gbkey=CDS;gene=ompS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=CCO40_RS08910;product=porin OmpS1;protein_id=WP_001080668.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1884667 1884978 . + . ID=gene-CCO40_RS08915;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=CCO40_RS08915;old_locus_tag=CCO40_08915 NZ_CP075116.1 Protein Homology CDS 1884667 1884978 . + 0 ID=cds-WP_000107435.1;Parent=gene-CCO40_RS08915;Dbxref=GenBank:WP_000107435.1;Name=WP_000107435.1;Ontology_term=GO:0051301;gbkey=CDS;gene=drpB;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460945.1;locus_tag=CCO40_RS08915;product=cell division protein DrpB;protein_id=WP_000107435.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1885058 1885753 . + . ID=gene-CCO40_RS08920;Name=CCO40_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08920;old_locus_tag=CCO40_08920 NZ_CP075116.1 Protein Homology CDS 1885058 1885753 . + 0 ID=cds-WP_000377039.1;Parent=gene-CCO40_RS08920;Dbxref=GenBank:WP_000377039.1;Name=WP_000377039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460944.1;locus_tag=CCO40_RS08920;product=phosphohydrolase;protein_id=WP_000377039.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1885827 1887257 . + . ID=gene-CCO40_RS08925;Name=CCO40_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08925;old_locus_tag=CCO40_08925 NZ_CP075116.1 Protein Homology CDS 1885827 1887257 . + 0 ID=cds-WP_001157307.1;Parent=gene-CCO40_RS08925;Dbxref=GenBank:WP_001157307.1;Name=WP_001157307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460943.1;locus_tag=CCO40_RS08925;product=DNA cytosine methyltransferase;protein_id=WP_001157307.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1887238 1887708 . + . ID=gene-CCO40_RS08930;Name=CCO40_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08930;old_locus_tag=CCO40_08930 NZ_CP075116.1 Protein Homology CDS 1887238 1887708 . + 0 ID=cds-WP_000785981.1;Parent=gene-CCO40_RS08930;Dbxref=GenBank:WP_000785981.1;Name=WP_000785981.1;Ontology_term=GO:0006298,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460942.1;locus_tag=CCO40_RS08930;product=very short patch repair endonuclease;protein_id=WP_000785981.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1887697 1888617 . - . ID=gene-CCO40_RS08935;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=CCO40_RS08935;old_locus_tag=CCO40_08935 NZ_CP075116.1 Protein Homology CDS 1887697 1888617 . - 0 ID=cds-WP_094889167.1;Parent=gene-CCO40_RS08935;Dbxref=GenBank:WP_094889167.1;Name=WP_094889167.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460941.1;locus_tag=CCO40_RS08935;product=drug/metabolite exporter YedA;protein_id=WP_094889167.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1888787 1889704 . + . ID=gene-CCO40_RS08940;Name=CCO40_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08940;old_locus_tag=CCO40_08940 NZ_CP075116.1 Protein Homology CDS 1888787 1889704 . + 0 ID=cds-WP_085920526.1;Parent=gene-CCO40_RS08940;Dbxref=GenBank:WP_085920526.1;Name=WP_085920526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=CCO40_RS08940;product=DUF808 domain-containing protein;protein_id=WP_085920526.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1889781 1889966 . + . ID=gene-CCO40_RS08945;Name=CCO40_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08945;old_locus_tag=CCO40_08945 NZ_CP075116.1 Protein Homology CDS 1889781 1889966 . + 0 ID=cds-WP_000232161.1;Parent=gene-CCO40_RS08945;Dbxref=GenBank:WP_000232161.1;Name=WP_000232161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549490.1;locus_tag=CCO40_RS08945;product=YodC family protein;protein_id=WP_000232161.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1890131 1891843 . + . ID=gene-CCO40_RS08950;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=CCO40_RS08950;old_locus_tag=CCO40_08950 NZ_CP075116.1 Protein Homology CDS 1890131 1891843 . + 0 ID=cds-WP_001119828.1;Parent=gene-CCO40_RS08950;Dbxref=GenBank:WP_001119828.1;Name=WP_001119828.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460938.1;locus_tag=CCO40_RS08950;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_001119828.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1891822 1892637 . - . ID=gene-CCO40_RS08955;Name=CCO40_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS08955;old_locus_tag=CCO40_08955 NZ_CP075116.1 Protein Homology CDS 1891822 1892637 . - 0 ID=cds-WP_000948794.1;Parent=gene-CCO40_RS08955;Dbxref=GenBank:WP_000948794.1;Name=WP_000948794.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460937.1;locus_tag=CCO40_RS08955;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_000948794.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1892947 1893174 . - . ID=gene-CCO40_RS08960;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=CCO40_RS08960;old_locus_tag=CCO40_08960 NZ_CP075116.1 Protein Homology CDS 1892947 1893174 . - 0 ID=cds-WP_000844798.1;Parent=gene-CCO40_RS08960;Dbxref=GenBank:WP_000844798.1;Name=WP_000844798.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460936.1;locus_tag=CCO40_RS08960;product=YodD family peroxide/acid resistance protein;protein_id=WP_000844798.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1893303 1893497 . + . ID=gene-CCO40_RS08965;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=CCO40_RS08965;old_locus_tag=CCO40_08965 NZ_CP075116.1 Protein Homology CDS 1893303 1893497 . + 0 ID=cds-WP_000867218.1;Parent=gene-CCO40_RS08965;Dbxref=GenBank:WP_000867218.1;Name=WP_000867218.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736680.1;locus_tag=CCO40_RS08965;product=protein DsrB;protein_id=WP_000867218.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1893536 1894159 . - . ID=gene-CCO40_RS08970;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=CCO40_RS08970;old_locus_tag=CCO40_08970 NZ_CP075116.1 Protein Homology CDS 1893536 1894159 . - 0 ID=cds-WP_000103971.1;Parent=gene-CCO40_RS08970;Dbxref=GenBank:WP_000103971.1;Name=WP_000103971.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460935.1;locus_tag=CCO40_RS08970;product=transcriptional regulator RcsA;protein_id=WP_000103971.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1894441 1895235 . - . ID=gene-CCO40_RS08975;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=CCO40_RS08975;old_locus_tag=CCO40_08975 NZ_CP075116.1 Protein Homology CDS 1894441 1895235 . - 0 ID=cds-WP_000616949.1;Parent=gene-CCO40_RS08975;Dbxref=GenBank:WP_000616949.1;Name=WP_000616949.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=CCO40_RS08975;product=flagellar biosynthetic protein FliR;protein_id=WP_000616949.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1895244 1895513 . - . ID=gene-CCO40_RS08980;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=CCO40_RS08980;old_locus_tag=CCO40_08980 NZ_CP075116.1 Protein Homology CDS 1895244 1895513 . - 0 ID=cds-WP_000187355.1;Parent=gene-CCO40_RS08980;Dbxref=GenBank:WP_000187355.1;Name=WP_000187355.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=CCO40_RS08980;product=flagellar biosynthesis protein FliQ;protein_id=WP_000187355.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1895523 1896260 . - . ID=gene-CCO40_RS08985;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=CCO40_RS08985;old_locus_tag=CCO40_08985 NZ_CP075116.1 Protein Homology CDS 1895523 1896260 . - 0 ID=cds-WP_001253411.1;Parent=gene-CCO40_RS08985;Dbxref=GenBank:WP_001253411.1;Name=WP_001253411.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460932.1;locus_tag=CCO40_RS08985;product=flagellar type III secretion system pore protein FliP;protein_id=WP_001253411.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1896260 1896637 . - . ID=gene-CCO40_RS08990;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=CCO40_RS08990;old_locus_tag=CCO40_08990 NZ_CP075116.1 Protein Homology CDS 1896260 1896637 . - 0 ID=cds-WP_000978276.1;Parent=gene-CCO40_RS08990;Dbxref=GenBank:WP_000978276.1;Name=WP_000978276.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460931.3;locus_tag=CCO40_RS08990;product=flagellar biosynthetic protein FliO;protein_id=WP_000978276.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1896637 1897050 . - . ID=gene-CCO40_RS08995;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=CCO40_RS08995;old_locus_tag=CCO40_08995 NZ_CP075116.1 Protein Homology CDS 1896637 1897050 . - 0 ID=cds-WP_001282111.1;Parent=gene-CCO40_RS08995;Dbxref=GenBank:WP_001282111.1;Name=WP_001282111.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460930.1;locus_tag=CCO40_RS08995;product=flagellar motor switch protein FliN;protein_id=WP_001282111.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1897047 1898051 . - . ID=gene-CCO40_RS09000;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=CCO40_RS09000;old_locus_tag=CCO40_09000 NZ_CP075116.1 Protein Homology CDS 1897047 1898051 . - 0 ID=cds-WP_000502811.1;Parent=gene-CCO40_RS09000;Dbxref=GenBank:WP_000502811.1;Name=WP_000502811.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=CCO40_RS09000;product=flagellar motor switch protein FliM;protein_id=WP_000502811.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1898056 1898523 . - . ID=gene-CCO40_RS09005;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=CCO40_RS09005;old_locus_tag=CCO40_09005 NZ_CP075116.1 Protein Homology CDS 1898056 1898523 . - 0 ID=cds-WP_000132169.1;Parent=gene-CCO40_RS09005;Dbxref=GenBank:WP_000132169.1;Name=WP_000132169.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=CCO40_RS09005;product=flagellar basal body-associated protein FliL;protein_id=WP_000132169.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1898628 1899851 . - . ID=gene-CCO40_RS09010;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=CCO40_RS09010;old_locus_tag=CCO40_09010 NZ_CP075116.1 Protein Homology CDS 1898628 1899851 . - 0 ID=cds-WP_000631673.1;Parent=gene-CCO40_RS09010;Dbxref=GenBank:WP_000631673.1;Name=WP_000631673.1;Ontology_term=GO:0044780,GO:0009424;gbkey=CDS;gene=fliK;go_component=bacterial-type flagellum hook|0009424||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=CCO40_RS09010;product=flagellar hook length control protein FliK;protein_id=WP_000631673.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1899848 1900291 . - . ID=gene-CCO40_RS09015;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=CCO40_RS09015;old_locus_tag=CCO40_09015 NZ_CP075116.1 Protein Homology CDS 1899848 1900291 . - 0 ID=cds-WP_000046981.1;Parent=gene-CCO40_RS09015;Dbxref=GenBank:WP_000046981.1;Name=WP_000046981.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460926.1;locus_tag=CCO40_RS09015;product=flagellar export protein FliJ;protein_id=WP_000046981.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1900313 1901683 . - . ID=gene-CCO40_RS09020;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=CCO40_RS09020;old_locus_tag=CCO40_09020 NZ_CP075116.1 Protein Homology CDS 1900313 1901683 . - 0 ID=cds-WP_000213257.1;Parent=gene-CCO40_RS09020;Dbxref=GenBank:WP_000213257.1;Name=WP_000213257.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=CCO40_RS09020;product=flagellar protein export ATPase FliI;protein_id=WP_000213257.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1901683 1902390 . - . ID=gene-CCO40_RS09025;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=CCO40_RS09025;old_locus_tag=CCO40_09025 NZ_CP075116.1 Protein Homology CDS 1901683 1902390 . - 0 ID=cds-WP_000064158.1;Parent=gene-CCO40_RS09025;Dbxref=GenBank:WP_000064158.1;Name=WP_000064158.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460924.1;locus_tag=CCO40_RS09025;product=flagellar assembly protein FliH;protein_id=WP_000064158.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1902383 1903378 . - . ID=gene-CCO40_RS09030;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=CCO40_RS09030;old_locus_tag=CCO40_09030 NZ_CP075116.1 Protein Homology CDS 1902383 1903378 . - 0 ID=cds-WP_000067735.1;Parent=gene-CCO40_RS09030;Dbxref=GenBank:WP_000067735.1;Name=WP_000067735.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460923.1;locus_tag=CCO40_RS09030;product=flagellar motor switch protein FliG;protein_id=WP_000067735.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1903371 1905053 . - . ID=gene-CCO40_RS09035;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=CCO40_RS09035;old_locus_tag=CCO40_09035 NZ_CP075116.1 Protein Homology CDS 1903371 1905053 . - 0 ID=cds-WP_001276833.1;Parent=gene-CCO40_RS09035;Dbxref=GenBank:WP_001276833.1;Name=WP_001276833.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=CCO40_RS09035;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_001276833.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1905270 1905584 . + . ID=gene-CCO40_RS09040;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=CCO40_RS09040;old_locus_tag=CCO40_09040 NZ_CP075116.1 Protein Homology CDS 1905270 1905584 . + 0 ID=cds-WP_000719037.1;Parent=gene-CCO40_RS09040;Dbxref=GenBank:WP_000719037.1;Name=WP_000719037.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460921.1;locus_tag=CCO40_RS09040;product=flagellar hook-basal body complex protein FliE;protein_id=WP_000719037.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1905708 1906094 . - . ID=gene-CCO40_RS09045;Name=CCO40_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09045;old_locus_tag=CCO40_09045 NZ_CP075116.1 Protein Homology CDS 1905708 1906094 . - 0 ID=cds-WP_000639596.1;Parent=gene-CCO40_RS09045;Dbxref=GenBank:WP_000639596.1;Name=WP_000639596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=CCO40_RS09045;product=hypothetical protein;protein_id=WP_000639596.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1906360 1906593 . - . ID=gene-CCO40_RS09050;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=CCO40_RS09050;old_locus_tag=CCO40_09050 NZ_CP075116.1 Protein Homology CDS 1906360 1906593 . - 0 ID=cds-WP_000790504.1;Parent=gene-CCO40_RS09050;Dbxref=GenBank:WP_000790504.1;Name=WP_000790504.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=CCO40_RS09050;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000790504.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1906590 1907795 . - . ID=gene-CCO40_RS09055;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=CCO40_RS09055;old_locus_tag=CCO40_09055 NZ_CP075116.1 Protein Homology CDS 1906590 1907795 . - 0 ID=cds-WP_001531105.1;Parent=gene-CCO40_RS09055;Dbxref=GenBank:WP_001531105.1;Name=WP_001531105.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156840.1;locus_tag=CCO40_RS09055;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_001531105.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1907981 1908394 . + . ID=gene-CCO40_RS09060;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=CCO40_RS09060;old_locus_tag=CCO40_09060 NZ_CP075116.1 Protein Homology CDS 1907981 1908394 . + 0 ID=cds-WP_000754694.1;Parent=gene-CCO40_RS09060;Dbxref=GenBank:WP_000754694.1;Name=WP_000754694.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754699.1;locus_tag=CCO40_RS09060;product=lipoprotein YedD;protein_id=WP_000754694.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1908434 1909918 . - . ID=gene-CCO40_RS09065;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=CCO40_RS09065;old_locus_tag=CCO40_09065 NZ_CP075116.1 Protein Homology CDS 1908434 1909918 . - 0 ID=cds-WP_094889166.1;Parent=gene-CCO40_RS09065;Dbxref=GenBank:WP_094889166.1;Name=WP_094889166.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=CCO40_RS09065;product=alpha-amylase;protein_id=WP_094889166.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1909990 1910358 . - . ID=gene-CCO40_RS09070;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=CCO40_RS09070;old_locus_tag=CCO40_09070 NZ_CP075116.1 Protein Homology CDS 1909990 1910358 . - 0 ID=cds-WP_000204899.1;Parent=gene-CCO40_RS09070;Dbxref=GenBank:WP_000204899.1;Name=WP_000204899.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460915.1;locus_tag=CCO40_RS09070;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_000204899.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1910358 1910765 . - . ID=gene-CCO40_RS09075;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=CCO40_RS09075;old_locus_tag=CCO40_09075 NZ_CP075116.1 Protein Homology CDS 1910358 1910765 . - 0 ID=cds-WP_000287764.1;Parent=gene-CCO40_RS09075;Dbxref=GenBank:WP_000287764.1;Name=WP_000287764.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460914.1;locus_tag=CCO40_RS09075;product=flagellar export chaperone FliS;protein_id=WP_000287764.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1910780 1912183 . - . ID=gene-CCO40_RS09080;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=CCO40_RS09080;old_locus_tag=CCO40_09080 NZ_CP075116.1 Protein Homology CDS 1910780 1912183 . - 0 ID=cds-WP_031605229.1;Parent=gene-CCO40_RS09080;Dbxref=GenBank:WP_031605229.1;Name=WP_031605229.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460913.1;locus_tag=CCO40_RS09080;product=flagellar filament capping protein FliD;protein_id=WP_031605229.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1912200 1912421 . + . ID=gene-CCO40_RS09085;Name=CCO40_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09085;old_locus_tag=CCO40_09085 NZ_CP075116.1 GeneMarkS-2+ CDS 1912200 1912421 . + 0 ID=cds-WP_023234688.1;Parent=gene-CCO40_RS09085;Dbxref=GenBank:WP_023234688.1;Name=WP_023234688.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO40_RS09085;product=hypothetical protein;protein_id=WP_023234688.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1912439 1913707 . + . ID=gene-CCO40_RS09090;Name=CCO40_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09090;old_locus_tag=CCO40_09090 NZ_CP075116.1 Protein Homology CDS 1912439 1913707 . + 0 ID=cds-WP_079831096.1;Parent=gene-CCO40_RS09090;Dbxref=GenBank:WP_079831096.1;Name=WP_079831096.1;Ontology_term=GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002953542.1;locus_tag=CCO40_RS09090;product=FliC/FljB family flagellin;protein_id=WP_079831096.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1913786 1914991 . + . ID=gene-CCO40_RS09095;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=protein_coding;locus_tag=CCO40_RS09095;old_locus_tag=CCO40_09095 NZ_CP075116.1 Protein Homology CDS 1913786 1914991 . + 0 ID=cds-WP_094889165.1;Parent=gene-CCO40_RS09095;Dbxref=GenBank:WP_094889165.1;Name=WP_094889165.1;gbkey=CDS;gene=fliB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=CCO40_RS09095;product=flagellin lysine-N-methylase;protein_id=WP_094889165.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1915188 1915907 . + . ID=gene-CCO40_RS09100;Name=CCO40_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09100;old_locus_tag=CCO40_09100 NZ_CP075116.1 Protein Homology CDS 1915188 1915907 . + 0 ID=cds-WP_001087453.1;Parent=gene-CCO40_RS09100;Dbxref=GenBank:WP_001087453.1;Name=WP_001087453.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460909.1;locus_tag=CCO40_RS09100;product=RNA polymerase sigma factor FliA;protein_id=WP_001087453.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1915966 1916517 . + . ID=gene-CCO40_RS09105;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=CCO40_RS09105;old_locus_tag=CCO40_09105 NZ_CP075116.1 Protein Homology CDS 1915966 1916517 . + 0 ID=cds-WP_000218080.1;Parent=gene-CCO40_RS09105;Dbxref=GenBank:WP_000218080.1;Name=WP_000218080.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460908.1;locus_tag=CCO40_RS09105;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_000218080.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1916664 1917464 . + . ID=gene-CCO40_RS09110;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=CCO40_RS09110;old_locus_tag=CCO40_09110 NZ_CP075116.1 Protein Homology CDS 1916664 1917464 . + 0 ID=cds-WP_000761634.1;Parent=gene-CCO40_RS09110;Dbxref=GenBank:WP_000761634.1;Name=WP_000761634.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460907.1;locus_tag=CCO40_RS09110;product=cystine ABC transporter substrate-binding protein;protein_id=WP_000761634.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1917618 1918604 . + . ID=gene-CCO40_RS09115;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=CCO40_RS09115;old_locus_tag=CCO40_09115 NZ_CP075116.1 Protein Homology CDS 1917618 1918604 . + 0 ID=cds-WP_001128188.1;Parent=gene-CCO40_RS09115;Dbxref=GenBank:WP_001128188.1;Name=WP_001128188.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=CCO40_RS09115;product=D-cysteine desulfhydrase;protein_id=WP_001128188.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1918625 1919293 . + . ID=gene-CCO40_RS09120;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=CCO40_RS09120;old_locus_tag=CCO40_09120 NZ_CP075116.1 Protein Homology CDS 1918625 1919293 . + 0 ID=cds-WP_001158238.1;Parent=gene-CCO40_RS09120;Dbxref=GenBank:WP_001158238.1;Name=WP_001158238.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460905.1;locus_tag=CCO40_RS09120;product=cystine ABC transporter permease;protein_id=WP_001158238.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1919290 1920042 . + . ID=gene-CCO40_RS09125;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=CCO40_RS09125;old_locus_tag=CCO40_09125 NZ_CP075116.1 Protein Homology CDS 1919290 1920042 . + 0 ID=cds-WP_080203097.1;Parent=gene-CCO40_RS09125;Dbxref=GenBank:WP_080203097.1;Name=WP_080203097.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460904.1;locus_tag=CCO40_RS09125;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_080203097.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1920275 1920997 . + . ID=gene-CCO40_RS09130;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=CCO40_RS09130;old_locus_tag=CCO40_09130 NZ_CP075116.1 Protein Homology CDS 1920275 1920997 . + 0 ID=cds-WP_094889164.1;Parent=gene-CCO40_RS09130;Dbxref=GenBank:WP_094889164.1;Name=WP_094889164.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460903.1;locus_tag=CCO40_RS09130;product=quorum-sensing transcriptional regulator SdiA;protein_id=WP_094889164.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1921064 1921288 . - . ID=gene-CCO40_RS09135;Name=CCO40_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09135;old_locus_tag=CCO40_09135 NZ_CP075116.1 Protein Homology CDS 1921064 1921288 . - 0 ID=cds-WP_000106483.1;Parent=gene-CCO40_RS09135;Dbxref=GenBank:WP_000106483.1;Name=WP_000106483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460902.1;locus_tag=CCO40_RS09135;product=DUF2594 family protein;protein_id=WP_000106483.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1921285 1921440 . - . ID=gene-CCO40_RS09140;Name=CCO40_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09140;old_locus_tag=CCO40_09140 NZ_CP075116.1 Protein Homology CDS 1921285 1921440 . - 0 ID=cds-WP_000546186.1;Parent=gene-CCO40_RS09140;Dbxref=GenBank:WP_000546186.1;Name=WP_000546186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=CCO40_RS09140;product=hypothetical protein;protein_id=WP_000546186.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1921752 1922408 . + . ID=gene-CCO40_RS09145;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=CCO40_RS09145;old_locus_tag=CCO40_09145 NZ_CP075116.1 Protein Homology CDS 1921752 1922408 . + 0 ID=cds-WP_000611323.1;Parent=gene-CCO40_RS09145;Dbxref=GenBank:WP_000611323.1;Name=WP_000611323.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460900.1;locus_tag=CCO40_RS09145;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_000611323.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1922405 1924237 . + . ID=gene-CCO40_RS09150;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=CCO40_RS09150;old_locus_tag=CCO40_09150 NZ_CP075116.1 Protein Homology CDS 1922405 1924237 . + 0 ID=cds-WP_001289468.1;Parent=gene-CCO40_RS09150;Dbxref=GenBank:WP_001289468.1;Name=WP_001289468.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460899.1;locus_tag=CCO40_RS09150;product=excinuclease ABC subunit UvrC;protein_id=WP_001289468.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1924294 1924842 . + . ID=gene-CCO40_RS09155;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=CCO40_RS09155;old_locus_tag=CCO40_09155 NZ_CP075116.1 Protein Homology CDS 1924294 1924842 . + 0 ID=cds-WP_001160192.1;Parent=gene-CCO40_RS09155;Dbxref=GenBank:WP_001160192.1;Name=WP_001160192.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460898.1;locus_tag=CCO40_RS09155;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001160192.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1924994 1925069 . + . ID=gene-CCO40_RS09160;Name=CCO40_RS09160;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS09160;old_locus_tag=CCO40_09160 NZ_CP075116.1 tRNAscan-SE tRNA 1924994 1925069 . + . ID=rna-CCO40_RS09160;Parent=gene-CCO40_RS09160;anticodon=(pos:1925027..1925029);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS09160;product=tRNA-Gly NZ_CP075116.1 tRNAscan-SE exon 1924994 1925069 . + . ID=exon-CCO40_RS09160-1;Parent=rna-CCO40_RS09160;anticodon=(pos:1925027..1925029);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS09160;product=tRNA-Gly NZ_CP075116.1 RefSeq gene 1925122 1925195 . + . ID=gene-CCO40_RS09165;Name=CCO40_RS09165;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS09165;old_locus_tag=CCO40_09165 NZ_CP075116.1 tRNAscan-SE tRNA 1925122 1925195 . + . ID=rna-CCO40_RS09165;Parent=gene-CCO40_RS09165;anticodon=(pos:1925154..1925156);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS09165;product=tRNA-Cys NZ_CP075116.1 tRNAscan-SE exon 1925122 1925195 . + . ID=exon-CCO40_RS09165-1;Parent=rna-CCO40_RS09165;anticodon=(pos:1925154..1925156);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS09165;product=tRNA-Cys NZ_CP075116.1 RefSeq gene 1925207 1925293 . + . ID=gene-CCO40_RS09170;Name=CCO40_RS09170;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS09170;old_locus_tag=CCO40_09170 NZ_CP075116.1 tRNAscan-SE tRNA 1925207 1925293 . + . ID=rna-CCO40_RS09170;Parent=gene-CCO40_RS09170;anticodon=(pos:1925241..1925243);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS09170;product=tRNA-Leu NZ_CP075116.1 tRNAscan-SE exon 1925207 1925293 . + . ID=exon-CCO40_RS09170-1;Parent=rna-CCO40_RS09170;anticodon=(pos:1925241..1925243);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS09170;product=tRNA-Leu NZ_CP075116.1 RefSeq gene 1925543 1925875 . + . ID=gene-CCO40_RS09175;Name=CCO40_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09175;old_locus_tag=CCO40_09175 NZ_CP075116.1 Protein Homology CDS 1925543 1925875 . + 0 ID=cds-WP_001659711.1;Parent=gene-CCO40_RS09175;Dbxref=GenBank:WP_001659711.1;Name=WP_001659711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460897.1;locus_tag=CCO40_RS09175;product=hypothetical protein;protein_id=WP_001659711.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1926089 1927528 . + . ID=gene-CCO40_RS09180;Name=CCO40_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09180;old_locus_tag=CCO40_09180 NZ_CP075116.1 Protein Homology CDS 1926089 1927528 . + 0 ID=cds-WP_077906119.1;Parent=gene-CCO40_RS09180;Dbxref=GenBank:WP_077906119.1;Name=WP_077906119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=CCO40_RS09180;product=SH3 domain-containing C40 family peptidase;protein_id=WP_077906119.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1927741 1928067 . + . ID=gene-CCO40_RS09185;Name=CCO40_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09185;old_locus_tag=CCO40_09185 NZ_CP075116.1 Protein Homology CDS 1927741 1928067 . + 0 ID=cds-WP_000240837.1;Parent=gene-CCO40_RS09185;Dbxref=GenBank:WP_000240837.1;Name=WP_000240837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=CCO40_RS09185;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000240837.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1928306 1928971 . + . ID=gene-CCO40_RS09190;Name=CCO40_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09190;old_locus_tag=CCO40_09190 NZ_CP075116.1 Protein Homology CDS 1928306 1928971 . + 0 ID=cds-WP_094889163.1;Parent=gene-CCO40_RS09190;Dbxref=GenBank:WP_094889163.1;Name=WP_094889163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460894.1;locus_tag=CCO40_RS09190;product=YecA/YgfB family protein;protein_id=WP_094889163.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1929046 1930257 . - . ID=gene-CCO40_RS09195;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=CCO40_RS09195;old_locus_tag=CCO40_09195 NZ_CP075116.1 Protein Homology CDS 1929046 1930257 . - 0 ID=cds-WP_094889162.1;Parent=gene-CCO40_RS09195;Dbxref=GenBank:WP_094889162.1;Name=WP_094889162.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460893.1;locus_tag=CCO40_RS09195;product=tyrosine transporter TyrP;protein_id=WP_094889162.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1930484 1930723 . + . ID=gene-CCO40_RS09200;Name=CCO40_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09200;old_locus_tag=CCO40_09200 NZ_CP075116.1 Protein Homology CDS 1930484 1930723 . + 0 ID=cds-WP_000377238.1;Parent=gene-CCO40_RS09200;Dbxref=GenBank:WP_000377238.1;Name=WP_000377238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460892.1;locus_tag=CCO40_RS09200;product=YecH family metal-binding protein;protein_id=WP_000377238.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1930769 1931266 . - . ID=gene-CCO40_RS09205;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=CCO40_RS09205;old_locus_tag=CCO40_09205 NZ_CP075116.1 Protein Homology CDS 1930769 1931266 . - 0 ID=cds-WP_000920613.1;Parent=gene-CCO40_RS09205;Dbxref=GenBank:WP_000920613.1;Name=WP_000920613.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=CCO40_RS09205;product=non-heme ferritin;protein_id=WP_000920613.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1931506 1931841 . - . ID=gene-CCO40_RS09210;Name=CCO40_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09210;old_locus_tag=CCO40_09210 NZ_CP075116.1 Protein Homology CDS 1931506 1931841 . - 0 ID=cds-WP_000803229.1;Parent=gene-CCO40_RS09210;Dbxref=GenBank:WP_000803229.1;Name=WP_000803229.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460890.1;locus_tag=CCO40_RS09210;product=YecR-like family lipoprotein;protein_id=WP_000803229.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1932097 1932735 . + . ID=gene-CCO40_RS09215;Name=CCO40_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09215;old_locus_tag=CCO40_09215 NZ_CP075116.1 Protein Homology CDS 1932097 1932735 . + 0 ID=cds-WP_000684804.1;Parent=gene-CCO40_RS09215;Dbxref=GenBank:WP_000684804.1;Name=WP_000684804.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460889.1;locus_tag=CCO40_RS09215;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_000684804.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1932914 1933417 . - . ID=gene-CCO40_RS09220;Name=CCO40_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09220;old_locus_tag=CCO40_09220 NZ_CP075116.1 Protein Homology CDS 1932914 1933417 . - 0 ID=cds-WP_000741707.1;Parent=gene-CCO40_RS09220;Dbxref=GenBank:WP_000741707.1;Name=WP_000741707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460888.1;locus_tag=CCO40_RS09220;product=non-heme ferritin-like protein;protein_id=WP_000741707.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1933968 1934525 . + . ID=gene-CCO40_RS09225;Name=CCO40_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09225;old_locus_tag=CCO40_09225 NZ_CP075116.1 Protein Homology CDS 1933968 1934525 . + 0 ID=cds-WP_045899741.1;Parent=gene-CCO40_RS09225;Dbxref=GenBank:WP_045899741.1;Name=WP_045899741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=CCO40_RS09225;product=DJ-1/PfpI family protein;protein_id=WP_045899741.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1934637 1934819 . + . ID=gene-CCO40_RS09230;Name=araH;gbkey=Gene;gene=araH;gene_biotype=pseudogene;locus_tag=CCO40_RS09230;old_locus_tag=CCO40_09230;partial=true;pseudo=true;start_range=.,1934637 NZ_CP075116.1 Protein Homology CDS 1934637 1934819 . + 0 ID=cds-CCO40_RS09230;Parent=gene-CCO40_RS09230;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026162.2;locus_tag=CCO40_RS09230;partial=true;product=L-arabinose ABC transporter permease AraH;pseudo=true;start_range=.,1934637;transl_table=11 NZ_CP075116.1 RefSeq gene 1935042 1935845 . + . ID=gene-CCO40_RS09235;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=CCO40_RS09235;old_locus_tag=CCO40_09235 NZ_CP075116.1 Protein Homology CDS 1935042 1935845 . + 0 ID=cds-WP_000840114.1;Parent=gene-CCO40_RS09235;Dbxref=GenBank:WP_000840114.1;Name=WP_000840114.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460886.1;locus_tag=CCO40_RS09235;product=trehalose-phosphatase;protein_id=WP_000840114.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1935820 1937241 . + . ID=gene-CCO40_RS09240;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=CCO40_RS09240;old_locus_tag=CCO40_09240 NZ_CP075116.1 Protein Homology CDS 1935820 1937241 . + 0 ID=cds-WP_000089042.1;Parent=gene-CCO40_RS09240;Dbxref=GenBank:WP_000089042.1;Name=WP_000089042.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460885.1;locus_tag=CCO40_RS09240;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_000089042.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1937259 1937687 . - . ID=gene-CCO40_RS09245;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=CCO40_RS09245;old_locus_tag=CCO40_09245 NZ_CP075116.1 Protein Homology CDS 1937259 1937687 . - 0 ID=cds-WP_000122606.1;Parent=gene-CCO40_RS09245;Dbxref=GenBank:WP_000122606.1;Name=WP_000122606.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=CCO40_RS09245;product=universal stress protein UspC;protein_id=WP_000122606.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1937684 1937800 . - . ID=gene-CCO40_RS09250;Name=CCO40_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09250;old_locus_tag=CCO40_09250 NZ_CP075116.1 Protein Homology CDS 1937684 1937800 . - 0 ID=cds-WP_001617301.1;Parent=gene-CCO40_RS09250;Dbxref=GenBank:WP_001617301.1;Name=WP_001617301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=CCO40_RS09250;product=hypothetical protein;protein_id=WP_001617301.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1938483 1938824 . + . ID=gene-CCO40_RS09255;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=CCO40_RS09255;old_locus_tag=CCO40_09255 NZ_CP075116.1 Protein Homology CDS 1938483 1938824 . + 0 ID=cds-WP_001518146.1;Parent=gene-CCO40_RS09255;Dbxref=GenBank:WP_001518146.1;Name=WP_001518146.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310629.2;locus_tag=CCO40_RS09255;product=flagellar transcriptional regulator FlhD;protein_id=WP_001518146.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1938821 1939405 . + . ID=gene-CCO40_RS09260;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=CCO40_RS09260;old_locus_tag=CCO40_09260 NZ_CP075116.1 Protein Homology CDS 1938821 1939405 . + 0 ID=cds-WP_000605987.1;Parent=gene-CCO40_RS09260;Dbxref=GenBank:WP_000605987.1;Name=WP_000605987.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460881.3;locus_tag=CCO40_RS09260;product=flagellar transcriptional regulator FlhC;protein_id=WP_000605987.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1939530 1940417 . + . ID=gene-CCO40_RS09265;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=CCO40_RS09265;old_locus_tag=CCO40_09265 NZ_CP075116.1 Protein Homology CDS 1939530 1940417 . + 0 ID=cds-WP_000906312.1;Parent=gene-CCO40_RS09265;Dbxref=GenBank:WP_000906312.1;Name=WP_000906312.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=CCO40_RS09265;product=flagellar motor stator protein MotA;protein_id=WP_000906312.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1940414 1941343 . + . ID=gene-CCO40_RS09270;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=CCO40_RS09270;old_locus_tag=CCO40_09270 NZ_CP075116.1 Protein Homology CDS 1940414 1941343 . + 0 ID=cds-WP_000795653.1;Parent=gene-CCO40_RS09270;Dbxref=GenBank:WP_000795653.1;Name=WP_000795653.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=CCO40_RS09270;product=flagellar motor protein MotB;protein_id=WP_000795653.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1941348 1943363 . + . ID=gene-CCO40_RS09275;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=CCO40_RS09275;old_locus_tag=CCO40_09275 NZ_CP075116.1 Protein Homology CDS 1941348 1943363 . + 0 ID=cds-WP_000061313.1;Parent=gene-CCO40_RS09275;Dbxref=GenBank:WP_000061313.1;Name=WP_000061313.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=CCO40_RS09275;product=chemotaxis protein CheA;protein_id=WP_000061313.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1943384 1943887 . + . ID=gene-CCO40_RS09280;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=CCO40_RS09280;old_locus_tag=CCO40_09280 NZ_CP075116.1 Protein Homology CDS 1943384 1943887 . + 0 ID=cds-WP_000147295.1;Parent=gene-CCO40_RS09280;Dbxref=GenBank:WP_000147295.1;Name=WP_000147295.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=CCO40_RS09280;product=chemotaxis protein CheW;protein_id=WP_000147295.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1944124 1945785 . + . ID=gene-CCO40_RS09285;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=CCO40_RS09285;old_locus_tag=CCO40_09285 NZ_CP075116.1 Protein Homology CDS 1944124 1945785 . + 0 ID=cds-WP_000483277.1;Parent=gene-CCO40_RS09285;Dbxref=GenBank:WP_000483277.1;Name=WP_000483277.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460876.1;locus_tag=CCO40_RS09285;product=methyl-accepting chemotaxis protein II;protein_id=WP_000483277.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1945946 1946812 . + . ID=gene-CCO40_RS09290;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=CCO40_RS09290;old_locus_tag=CCO40_09290 NZ_CP075116.1 Protein Homology CDS 1945946 1946812 . + 0 ID=cds-WP_000204370.1;Parent=gene-CCO40_RS09290;Dbxref=GenBank:WP_000204370.1;Name=WP_000204370.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460875.1;locus_tag=CCO40_RS09290;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_000204370.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1946809 1947858 . + . ID=gene-CCO40_RS09295;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=CCO40_RS09295;old_locus_tag=CCO40_09295 NZ_CP075116.1 Protein Homology CDS 1946809 1947858 . + 0 ID=cds-WP_000036389.1;Parent=gene-CCO40_RS09295;Dbxref=GenBank:WP_000036389.1;Name=WP_000036389.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=CCO40_RS09295;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_000036389.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1947876 1948265 . + . ID=gene-CCO40_RS09300;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=CCO40_RS09300;old_locus_tag=CCO40_09300 NZ_CP075116.1 Protein Homology CDS 1947876 1948265 . + 0 ID=cds-WP_000763861.1;Parent=gene-CCO40_RS09300;Dbxref=GenBank:WP_000763861.1;Name=WP_000763861.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=CCO40_RS09300;product=chemotaxis response regulator CheY;protein_id=WP_000763861.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1948276 1948920 . + . ID=gene-CCO40_RS09305;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=CCO40_RS09305;old_locus_tag=CCO40_09305 NZ_CP075116.1 Protein Homology CDS 1948276 1948920 . + 0 ID=cds-WP_000983585.1;Parent=gene-CCO40_RS09305;Dbxref=GenBank:WP_000983585.1;Name=WP_000983585.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=CCO40_RS09305;product=protein phosphatase CheZ;protein_id=WP_000983585.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1949114 1950265 . + . ID=gene-CCO40_RS09310;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=CCO40_RS09310;old_locus_tag=CCO40_09310 NZ_CP075116.1 Protein Homology CDS 1949114 1950265 . + 0 ID=cds-WP_000797089.1;Parent=gene-CCO40_RS09310;Dbxref=GenBank:WP_000797089.1;Name=WP_000797089.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=CCO40_RS09310;product=flagellar biosynthesis protein FlhB;protein_id=WP_000797089.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1950258 1952336 . + . ID=gene-CCO40_RS09315;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=CCO40_RS09315;old_locus_tag=CCO40_09315 NZ_CP075116.1 Protein Homology CDS 1950258 1952336 . + 0 ID=cds-WP_000002386.1;Parent=gene-CCO40_RS09315;Dbxref=GenBank:WP_000002386.1;Name=WP_000002386.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460870.1;locus_tag=CCO40_RS09315;product=flagellar biosynthesis protein FlhA;protein_id=WP_000002386.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1952336 1952728 . + . ID=gene-CCO40_RS09320;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=CCO40_RS09320;old_locus_tag=CCO40_09320 NZ_CP075116.1 Protein Homology CDS 1952336 1952728 . + 0 ID=cds-WP_001233619.1;Parent=gene-CCO40_RS09320;Dbxref=GenBank:WP_001233619.1;Name=WP_001233619.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460869.1;locus_tag=CCO40_RS09320;product=flagellar protein FlhE;protein_id=WP_001233619.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1952965 1954104 . + . ID=gene-CCO40_RS09325;Name=bglB;gbkey=Gene;gene=bglB;gene_biotype=protein_coding;locus_tag=CCO40_RS09325;old_locus_tag=CCO40_09325 NZ_CP075116.1 Protein Homology CDS 1952965 1954104 . + 0 ID=cds-WP_000989904.1;Parent=gene-CCO40_RS09325;Dbxref=GenBank:WP_000989904.1;Name=WP_000989904.1;Ontology_term=GO:0009313,GO:0004556;gbkey=CDS;gene=bglB;go_function=alpha-amylase activity|0004556||IEA;go_process=oligosaccharide catabolic process|0009313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=CCO40_RS09325;product=beta-galactosidase BglB;protein_id=WP_000989904.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1954158 1956029 . - . ID=gene-CCO40_RS09330;Name=mrdA2;gbkey=Gene;gene=mrdA2;gene_biotype=protein_coding;locus_tag=CCO40_RS09330;old_locus_tag=CCO40_09330 NZ_CP075116.1 Protein Homology CDS 1954158 1956029 . - 0 ID=cds-WP_000142875.1;Parent=gene-CCO40_RS09330;Dbxref=GenBank:WP_000142875.1;Name=WP_000142875.1;Ontology_term=GO:0009002;gbkey=CDS;gene=mrdA2;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=CCO40_RS09330;product=peptidoglycan DD-transpeptidase MrdA2;protein_id=WP_000142875.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1956218 1957951 . - . ID=gene-CCO40_RS09335;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=CCO40_RS09335;old_locus_tag=CCO40_09335 NZ_CP075116.1 Protein Homology CDS 1956218 1957951 . - 0 ID=cds-WP_001025358.1;Parent=gene-CCO40_RS09335;Dbxref=GenBank:WP_001025358.1;Name=WP_001025358.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=CCO40_RS09335;product=arginine--tRNA ligase;protein_id=WP_001025358.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1958188 1958757 . + . ID=gene-CCO40_RS09340;Name=CCO40_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09340;old_locus_tag=CCO40_09340 NZ_CP075116.1 Protein Homology CDS 1958188 1958757 . + 0 ID=cds-WP_000024796.1;Parent=gene-CCO40_RS09340;Dbxref=GenBank:WP_000024796.1;Name=WP_000024796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460865.1;locus_tag=CCO40_RS09340;product=VOC family protein;protein_id=WP_000024796.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1958777 1959523 . + . ID=gene-CCO40_RS09345;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=CCO40_RS09345;old_locus_tag=CCO40_09345 NZ_CP075116.1 Protein Homology CDS 1958777 1959523 . + 0 ID=cds-WP_001185769.1;Parent=gene-CCO40_RS09345;Dbxref=GenBank:WP_001185769.1;Name=WP_001185769.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460864.1;locus_tag=CCO40_RS09345;product=copper homeostasis protein CutC;protein_id=WP_001185769.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1959759 1960730 . - . ID=gene-CCO40_RS09350;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=CCO40_RS09350;old_locus_tag=CCO40_09350 NZ_CP075116.1 Protein Homology CDS 1959759 1960730 . - 0 ID=cds-WP_000569035.1;Parent=gene-CCO40_RS09350;Dbxref=GenBank:WP_000569035.1;Name=WP_000569035.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460863.1;locus_tag=CCO40_RS09350;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_000569035.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1960727 1961470 . - . ID=gene-CCO40_RS09355;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=CCO40_RS09355;old_locus_tag=CCO40_09355 NZ_CP075116.1 Protein Homology CDS 1960727 1961470 . - 0 ID=cds-WP_000019607.1;Parent=gene-CCO40_RS09355;Dbxref=GenBank:WP_000019607.1;Name=WP_000019607.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460862.1;locus_tag=CCO40_RS09355;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_000019607.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1961511 1961906 . - . ID=gene-CCO40_RS09360;Name=CCO40_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09360;old_locus_tag=CCO40_09360 NZ_CP075116.1 Protein Homology CDS 1961511 1961906 . - 0 ID=cds-WP_000252975.1;Parent=gene-CCO40_RS09360;Dbxref=GenBank:WP_000252975.1;Name=WP_000252975.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460861.1;locus_tag=CCO40_RS09360;product=MAPEG family protein;protein_id=WP_000252975.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1961959 1962777 . - . ID=gene-CCO40_RS09365;Name=CCO40_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09365;old_locus_tag=CCO40_09365 NZ_CP075116.1 Protein Homology CDS 1961959 1962777 . - 0 ID=cds-WP_000639232.1;Parent=gene-CCO40_RS09365;Dbxref=GenBank:WP_000639232.1;Name=WP_000639232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=CCO40_RS09365;product=DUF72 domain-containing protein;protein_id=WP_000639232.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1962774 1963340 . - . ID=gene-CCO40_RS09370;Name=CCO40_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09370;old_locus_tag=CCO40_09370 NZ_CP075116.1 Protein Homology CDS 1962774 1963340 . - 0 ID=cds-WP_000916144.1;Parent=gene-CCO40_RS09370;Dbxref=GenBank:WP_000916144.1;Name=WP_000916144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460859.1;locus_tag=CCO40_RS09370;product=hydrolase;protein_id=WP_000916144.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1963665 1965437 . + . ID=gene-CCO40_RS09375;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=CCO40_RS09375;old_locus_tag=CCO40_09375 NZ_CP075116.1 Protein Homology CDS 1963665 1965437 . + 0 ID=cds-WP_001258629.1;Parent=gene-CCO40_RS09375;Dbxref=GenBank:WP_001258629.1;Name=WP_001258629.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460858.1;locus_tag=CCO40_RS09375;product=aspartate--tRNA ligase;protein_id=WP_001258629.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1965540 1965992 . + . ID=gene-CCO40_RS09380;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=CCO40_RS09380;old_locus_tag=CCO40_09380 NZ_CP075116.1 Protein Homology CDS 1965540 1965992 . + 0 ID=cds-WP_000653693.1;Parent=gene-CCO40_RS09380;Dbxref=GenBank:WP_000653693.1;Name=WP_000653693.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460857.1;locus_tag=CCO40_RS09380;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_000653693.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1966022 1966762 . + . ID=gene-CCO40_RS09385;Name=CCO40_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09385;old_locus_tag=CCO40_09385 NZ_CP075116.1 Protein Homology CDS 1966022 1966762 . + 0 ID=cds-WP_000907242.1;Parent=gene-CCO40_RS09385;Dbxref=GenBank:WP_000907242.1;Name=WP_000907242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=CCO40_RS09385;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000907242.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1966799 1967320 . + . ID=gene-CCO40_RS09390;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=CCO40_RS09390;old_locus_tag=CCO40_09390 NZ_CP075116.1 Protein Homology CDS 1966799 1967320 . + 0 ID=cds-WP_000022509.1;Parent=gene-CCO40_RS09390;Dbxref=GenBank:WP_000022509.1;Name=WP_000022509.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=CCO40_RS09390;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_000022509.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1967322 1967921 . - . ID=gene-CCO40_RS09395;Name=CCO40_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09395;old_locus_tag=CCO40_09395 NZ_CP075116.1 Protein Homology CDS 1967322 1967921 . - 0 ID=cds-WP_000716746.1;Parent=gene-CCO40_RS09395;Dbxref=GenBank:WP_000716746.1;Name=WP_000716746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460854.1;locus_tag=CCO40_RS09395;product=YebB family permuted papain-like enzyme;protein_id=WP_000716746.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1968131 1968823 . + . ID=gene-CCO40_RS09400;Name=CCO40_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09400;old_locus_tag=CCO40_09400 NZ_CP075116.1 Protein Homology CDS 1968131 1968823 . + 0 ID=cds-WP_000227319.1;Parent=gene-CCO40_RS09400;Dbxref=GenBank:WP_000227319.1;Name=WP_000227319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227317.1;locus_tag=CCO40_RS09400;product=hypothetical protein;protein_id=WP_000227319.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1969183 1969794 . + . ID=gene-CCO40_RS09405;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=CCO40_RS09405;old_locus_tag=CCO40_09405 NZ_CP075116.1 Protein Homology CDS 1969183 1969794 . + 0 ID=cds-WP_000580335.1;Parent=gene-CCO40_RS09405;Dbxref=GenBank:WP_000580335.1;Name=WP_000580335.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=CCO40_RS09405;product=Holliday junction branch migration protein RuvA;protein_id=WP_000580335.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1969803 1970813 . + . ID=gene-CCO40_RS09410;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=CCO40_RS09410;old_locus_tag=CCO40_09410 NZ_CP075116.1 Protein Homology CDS 1969803 1970813 . + 0 ID=cds-WP_000568508.1;Parent=gene-CCO40_RS09410;Dbxref=GenBank:WP_000568508.1;Name=WP_000568508.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460851.1;locus_tag=CCO40_RS09410;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568508.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1970892 1971677 . - . ID=gene-CCO40_RS09415;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=CCO40_RS09415;old_locus_tag=CCO40_09415 NZ_CP075116.1 Protein Homology CDS 1970892 1971677 . - 0 ID=cds-WP_000571508.1;Parent=gene-CCO40_RS09415;Dbxref=GenBank:WP_000571508.1;Name=WP_000571508.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=CCO40_RS09415;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_000571508.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1971674 1972429 . - . ID=gene-CCO40_RS09420;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=CCO40_RS09420;old_locus_tag=CCO40_09420 NZ_CP075116.1 Protein Homology CDS 1971674 1972429 . - 0 ID=cds-WP_094889161.1;Parent=gene-CCO40_RS09420;Dbxref=GenBank:WP_094889161.1;Name=WP_094889161.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=CCO40_RS09420;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_094889161.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1972508 1973452 . + . ID=gene-CCO40_RS09425;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=CCO40_RS09425;old_locus_tag=CCO40_09425 NZ_CP075116.1 Protein Homology CDS 1972508 1973452 . + 0 ID=cds-WP_000939597.1;Parent=gene-CCO40_RS09425;Dbxref=GenBank:WP_000939597.1;Name=WP_000939597.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=CCO40_RS09425;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_000939597.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1973468 1974787 . + . ID=gene-CCO40_RS09430;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=CCO40_RS09430;old_locus_tag=CCO40_09430 NZ_CP075116.1 Protein Homology CDS 1973468 1974787 . + 0 ID=cds-WP_001184028.1;Parent=gene-CCO40_RS09430;Dbxref=GenBank:WP_001184028.1;Name=WP_001184028.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=CCO40_RS09430;product=murein DD-endopeptidase MepM;protein_id=WP_001184028.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1974904 1975875 . + . ID=gene-CCO40_RS09435;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=CCO40_RS09435;old_locus_tag=CCO40_09435 NZ_CP075116.1 Protein Homology CDS 1974904 1975875 . + 0 ID=cds-WP_000448401.1;Parent=gene-CCO40_RS09435;Dbxref=GenBank:WP_000448401.1;Name=WP_000448401.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460846.1;locus_tag=CCO40_RS09435;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_000448401.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1975948 1977390 . - . ID=gene-CCO40_RS09440;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=CCO40_RS09440;old_locus_tag=CCO40_09440 NZ_CP075116.1 Protein Homology CDS 1975948 1977390 . - 0 ID=cds-WP_000091156.1;Parent=gene-CCO40_RS09440;Dbxref=GenBank:WP_000091156.1;Name=WP_000091156.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=CCO40_RS09440;product=pyruvate kinase;protein_id=WP_000091156.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1977514 1978383 . - . ID=gene-CCO40_RS09445;Name=CCO40_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09445;old_locus_tag=CCO40_09445 NZ_CP075116.1 Protein Homology CDS 1977514 1978383 . - 0 ID=cds-WP_001056719.1;Parent=gene-CCO40_RS09445;Dbxref=GenBank:WP_001056719.1;Name=WP_001056719.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700,GO:0097367;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,carbohydrate derivative binding|0097367||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460844.1;locus_tag=CCO40_RS09445;product=MurR/RpiR family transcriptional regulator;protein_id=WP_001056719.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1978725 1980200 . + . ID=gene-CCO40_RS09450;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=CCO40_RS09450;old_locus_tag=CCO40_09450 NZ_CP075116.1 Protein Homology CDS 1978725 1980200 . + 0 ID=cds-WP_000301711.1;Parent=gene-CCO40_RS09450;Dbxref=GenBank:WP_000301711.1;Name=WP_000301711.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=CCO40_RS09450;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301711.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1980435 1982246 . + . ID=gene-CCO40_RS09455;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=CCO40_RS09455;old_locus_tag=CCO40_09455 NZ_CP075116.1 Protein Homology CDS 1980435 1982246 . + 0 ID=cds-WP_001069124.1;Parent=gene-CCO40_RS09455;Dbxref=GenBank:WP_001069124.1;Name=WP_001069124.1;Ontology_term=GO:0061678,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway|0061678||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460842.1;locus_tag=CCO40_RS09455;product=phosphogluconate dehydratase;protein_id=WP_001069124.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1982284 1982925 . + . ID=gene-CCO40_RS09460;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=CCO40_RS09460;old_locus_tag=CCO40_09460 NZ_CP075116.1 Protein Homology CDS 1982284 1982925 . + 0 ID=cds-WP_000800494.1;Parent=gene-CCO40_RS09460;Dbxref=GenBank:WP_000800494.1;Name=WP_000800494.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=CCO40_RS09460;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000800494.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1983025 1984203 . - . ID=gene-CCO40_RS09465;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=CCO40_RS09465;old_locus_tag=CCO40_09465 NZ_CP075116.1 Protein Homology CDS 1983025 1984203 . - 0 ID=cds-WP_000173431.1;Parent=gene-CCO40_RS09465;Dbxref=GenBank:WP_000173431.1;Name=WP_000173431.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460840.1;locus_tag=CCO40_RS09465;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_000173431.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1984334 1984624 . + . ID=gene-CCO40_RS09470;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=CCO40_RS09470;old_locus_tag=CCO40_09470 NZ_CP075116.1 Protein Homology CDS 1984334 1984624 . + 0 ID=cds-WP_000257723.1;Parent=gene-CCO40_RS09470;Dbxref=GenBank:WP_000257723.1;Name=WP_000257723.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460839.1;locus_tag=CCO40_RS09470;product=DNA damage-inducible protein YebG;protein_id=WP_000257723.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1984692 1985045 . + . ID=gene-CCO40_RS09475;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=CCO40_RS09475;old_locus_tag=CCO40_09475 NZ_CP075116.1 Protein Homology CDS 1984692 1985045 . + 0 ID=cds-WP_001042123.1;Parent=gene-CCO40_RS09475;Dbxref=GenBank:WP_001042123.1;Name=WP_001042123.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460838.1;locus_tag=CCO40_RS09475;product=protein YebF;protein_id=WP_001042123.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1985139 1985798 . + . ID=gene-CCO40_RS09480;Name=CCO40_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09480;old_locus_tag=CCO40_09480 NZ_CP075116.1 Protein Homology CDS 1985139 1985798 . + 0 ID=cds-WP_000024707.1;Parent=gene-CCO40_RS09480;Dbxref=GenBank:WP_000024707.1;Name=WP_000024707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=CCO40_RS09480;product=tellurite resistance TerB family protein;protein_id=WP_000024707.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1986011 1988062 . + . ID=gene-CCO40_RS09485;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=CCO40_RS09485;old_locus_tag=CCO40_09485 NZ_CP075116.1 Protein Homology CDS 1986011 1988062 . + 0 ID=cds-WP_094889160.1;Parent=gene-CCO40_RS09485;Dbxref=GenBank:WP_094889160.1;Name=WP_094889160.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460836.1;locus_tag=CCO40_RS09485;product=oligopeptidase B;protein_id=WP_094889160.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1988099 1988797 . - . ID=gene-CCO40_RS09490;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=CCO40_RS09490;old_locus_tag=CCO40_09490 NZ_CP075116.1 Protein Homology CDS 1988099 1988797 . - 0 ID=cds-WP_000944287.1;Parent=gene-CCO40_RS09490;Dbxref=GenBank:WP_000944287.1;Name=WP_000944287.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460835.1;locus_tag=CCO40_RS09490;product=exodeoxyribonuclease X;protein_id=WP_000944287.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1988821 1989477 . - . ID=gene-CCO40_RS09495;Name=CCO40_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09495;old_locus_tag=CCO40_09495 NZ_CP075116.1 Protein Homology CDS 1988821 1989477 . - 0 ID=cds-WP_000100249.1;Parent=gene-CCO40_RS09495;Dbxref=GenBank:WP_000100249.1;Name=WP_000100249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460834.1;locus_tag=CCO40_RS09495;product=carbon-nitrogen hydrolase family protein;protein_id=WP_000100249.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1989585 1989815 . - . ID=gene-CCO40_RS09500;Name=CCO40_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09500;old_locus_tag=CCO40_09500 NZ_CP075116.1 Protein Homology CDS 1989585 1989815 . - 0 ID=cds-WP_000856224.1;Parent=gene-CCO40_RS09500;Dbxref=GenBank:WP_000856224.1;Name=WP_000856224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460833.1;locus_tag=CCO40_RS09500;product=DNA polymerase III subunit theta;protein_id=WP_000856224.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1989953 1990327 . + . ID=gene-CCO40_RS09505;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=CCO40_RS09505;old_locus_tag=CCO40_09505 NZ_CP075116.1 Protein Homology CDS 1989953 1990327 . + 0 ID=cds-WP_094889159.1;Parent=gene-CCO40_RS09505;Dbxref=GenBank:WP_094889159.1;Name=WP_094889159.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=CCO40_RS09505;product=CopC domain-containing protein YobA;protein_id=WP_094889159.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1990328 1991203 . + . ID=gene-CCO40_RS09510;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=CCO40_RS09510;old_locus_tag=CCO40_09510 NZ_CP075116.1 Protein Homology CDS 1990328 1991203 . + 0 ID=cds-WP_094889158.1;Parent=gene-CCO40_RS09510;Dbxref=GenBank:WP_094889158.1;Name=WP_094889158.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460831.1;locus_tag=CCO40_RS09510;product=copper homeostasis membrane protein CopD;protein_id=WP_094889158.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1991220 1991573 . + . ID=gene-CCO40_RS09515;Name=CCO40_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09515;old_locus_tag=CCO40_09515 NZ_CP075116.1 Protein Homology CDS 1991220 1991573 . + 0 ID=cds-WP_000722368.1;Parent=gene-CCO40_RS09515;Dbxref=GenBank:WP_000722368.1;Name=WP_000722368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460830.1;locus_tag=CCO40_RS09515;product=YebY family protein;protein_id=WP_000722368.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1991947 1992870 . - . ID=gene-CCO40_RS09520;Name=CCO40_RS09520;end_range=1992870,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS09520;old_locus_tag=CCO40_09520;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 1991947 1992870 . - 0 ID=cds-CCO40_RS09520;Parent=gene-CCO40_RS09520;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=1992870,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=CCO40_RS09520;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1992870 1993595 . - . ID=gene-CCO40_RS22675;Name=CCO40_RS22675;end_range=1993595,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22675;old_locus_tag=CCO40_09525;partial=true;pseudo=true;start_range=.,1992870 NZ_CP075116.1 Protein Homology CDS 1992870 1993595 . - 0 ID=cds-CCO40_RS22675;Parent=gene-CCO40_RS22675;Note=The RecE (also known as exonuclease VIII) pathway is an alternative pathway for the initiation of homologous recombination in Escherichia coli. The RecE pathway is activated in recB%2C recC sbcA (suppressors of recB and recC) mutants. Activation of the RecE pathway results in the production of at least two phage proteins relevant for recombinational repair. RecE is a duplex DNA-specific exonuclease which produces 3' overhangs in duplex DNA by preferentially degrading the 5'-ending strands. Recombinational repair of E.coli chromosomal DNA involves as well other proteins: RecA%2C RecF%2C RecJ%2C RecO%2C RecR%2C and RuvC.%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1993595,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023732.1;locus_tag=CCO40_RS22675;partial=true;product=exonuclease VIII;pseudo=true;start_range=.,1992870;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1993584 1993775 . + . ID=gene-CCO40_RS09530;Name=CCO40_RS09530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS09530;old_locus_tag=CCO40_09530;partial=true;pseudo=true;start_range=.,1993584 NZ_CP075116.1 Protein Homology CDS 1993584 1993775 . + 0 ID=cds-CCO40_RS09530;Parent=gene-CCO40_RS09530;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459884.1;locus_tag=CCO40_RS09530;partial=true;product=glycoside hydrolase family 19 protein;pseudo=true;start_range=.,1993584;transl_table=11 NZ_CP075116.1 RefSeq gene 1993829 1994362 . + . ID=gene-CCO40_RS09535;Name=CCO40_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09535;old_locus_tag=CCO40_09535 NZ_CP075116.1 Protein Homology CDS 1993829 1994362 . + 0 ID=cds-WP_001050883.1;Parent=gene-CCO40_RS09535;Dbxref=GenBank:WP_001050883.1;Name=WP_001050883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460825.1;locus_tag=CCO40_RS09535;product=DUF2514 domain-containing protein;protein_id=WP_001050883.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1994619 1994786 . - . ID=gene-CCO40_RS09540;Name=CCO40_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09540;old_locus_tag=CCO40_09540 NZ_CP075116.1 Protein Homology CDS 1994619 1994786 . - 0 ID=cds-WP_000789529.1;Parent=gene-CCO40_RS09540;Dbxref=GenBank:WP_000789529.1;Name=WP_000789529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460824.1;locus_tag=CCO40_RS09540;product=lytic enzyme;protein_id=WP_000789529.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1995094 1995354 . + . ID=gene-CCO40_RS09545;Name=CCO40_RS09545;end_range=1995354,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS09545;old_locus_tag=CCO40_09545;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 1995094 1995354 . + 0 ID=cds-CCO40_RS09545;Parent=gene-CCO40_RS09545;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1995354,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459886.1;locus_tag=CCO40_RS09545;partial=true;product=DUF1441 family protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1995347 1995616 . + . ID=gene-CCO40_RS09550;Name=CCO40_RS09550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS09550;old_locus_tag=CCO40_09550;partial=true;pseudo=true;start_range=.,1995347 NZ_CP075116.1 Protein Homology CDS 1995347 1995616 . + 0 ID=cds-CCO40_RS09550;Parent=gene-CCO40_RS09550;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460024.1;locus_tag=CCO40_RS09550;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1995347;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1995613 1996125 . + . ID=gene-CCO40_RS22680;Name=CCO40_RS22680;end_range=1996125,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22680;old_locus_tag=CCO40_09555;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 1995613 1996125 . + 0 ID=cds-CCO40_RS22680;Parent=gene-CCO40_RS22680;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1996125,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461523.1;locus_tag=CCO40_RS22680;partial=true;product=macro domain-containing protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1996092 1996580 . + . ID=gene-CCO40_RS09560;Name=CCO40_RS09560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS09560;old_locus_tag=CCO40_09560;partial=true;pseudo=true;start_range=.,1996092 NZ_CP075116.1 Protein Homology CDS 1996092 1996580 . + 0 ID=cds-CCO40_RS09560;Parent=gene-CCO40_RS09560;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461522.1;locus_tag=CCO40_RS09560;partial=true;product=tail fiber assembly protein;pseudo=true;start_range=.,1996092;transl_table=11 NZ_CP075116.1 RefSeq gene 1996677 1996877 . - . ID=gene-CCO40_RS09565;Name=pagK;gbkey=Gene;gene=pagK;gene_biotype=protein_coding;gene_synonym=pagK1;locus_tag=CCO40_RS09565;old_locus_tag=CCO40_09565 NZ_CP075116.1 Protein Homology CDS 1996677 1996877 . - 0 ID=cds-WP_010989029.1;Parent=gene-CCO40_RS09565;Dbxref=GenBank:WP_010989029.1;Name=WP_010989029.1;gbkey=CDS;gene=pagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460822.1;locus_tag=CCO40_RS09565;product=vesicle-borne virulence factor PagK;protein_id=WP_010989029.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1997267 1997456 . - . ID=gene-CCO40_RS22465;Name=CCO40_RS22465;end_range=1997456,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22465;partial=true;pseudo=true;start_range=.,1997267 NZ_CP075116.1 Protein Homology CDS 1997267 1997456 . - 0 ID=cds-CCO40_RS22465;Parent=gene-CCO40_RS22465;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1997456,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=CCO40_RS22465;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1997267;transl_table=11 NZ_CP075116.1 RefSeq gene 1997447 1997572 . + . ID=gene-CCO40_RS09570;Name=CCO40_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09570;old_locus_tag=CCO40_09570 NZ_CP075116.1 Protein Homology CDS 1997447 1997572 . + 0 ID=cds-WP_000457876.1;Parent=gene-CCO40_RS09570;Dbxref=GenBank:WP_000457876.1;Name=WP_000457876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457876.1;locus_tag=CCO40_RS09570;product=hypothetical protein;protein_id=WP_000457876.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 1998247 1998393 . + . ID=gene-CCO40_RS22685;Name=CCO40_RS22685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22685;old_locus_tag=CCO40_09575;partial=true;pseudo=true;start_range=.,1998247 NZ_CP075116.1 Protein Homology CDS 1998247 1998393 . + 0 ID=cds-CCO40_RS22685;Parent=gene-CCO40_RS22685;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219268.1;locus_tag=CCO40_RS22685;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,1998247;transl_table=11 NZ_CP075116.1 RefSeq gene 1998720 1999334 . - . ID=gene-CCO40_RS09580;Name=CCO40_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09580;old_locus_tag=CCO40_09580 NZ_CP075116.1 Protein Homology CDS 1998720 1999334 . - 0 ID=cds-WP_000848069.1;Parent=gene-CCO40_RS09580;Dbxref=GenBank:WP_000848069.1;Name=WP_000848069.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460820.1;locus_tag=CCO40_RS09580;product=disulfide bond formation protein B;protein_id=WP_000848069.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1999344 1999502 . - . ID=gene-CCO40_RS09585;Name=CCO40_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09585;old_locus_tag=CCO40_09585 NZ_CP075116.1 Protein Homology CDS 1999344 1999502 . - 0 ID=cds-WP_000480735.1;Parent=gene-CCO40_RS09585;Dbxref=GenBank:WP_000480735.1;Name=WP_000480735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460819.1;locus_tag=CCO40_RS09585;product=DUF5993 family protein;protein_id=WP_000480735.1;transl_table=11 NZ_CP075116.1 RefSeq gene 1999635 2000549 . - . ID=gene-CCO40_RS09590;Name=pagO;gbkey=Gene;gene=pagO;gene_biotype=protein_coding;locus_tag=CCO40_RS09590;old_locus_tag=CCO40_09590 NZ_CP075116.1 Protein Homology CDS 1999635 2000549 . - 0 ID=cds-WP_001233446.1;Parent=gene-CCO40_RS09590;Dbxref=GenBank:WP_001233446.1;Name=WP_001233446.1;gbkey=CDS;gene=pagO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460818.1;locus_tag=CCO40_RS09590;product=PhoPQ-activated DMT family transporter PagO;protein_id=WP_001233446.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 2001879 2002301 . - . ID=gene-CCO40_RS09595;Name=CCO40_RS09595;end_range=2002301,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS09595;old_locus_tag=CCO40_09595;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 2001879 2002301 . - 0 ID=cds-CCO40_RS09595;Parent=gene-CCO40_RS09595;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=2002301,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001189081.1;locus_tag=CCO40_RS09595;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 2002371 2003565 . + . ID=gene-CCO40_RS09600;Name=CCO40_RS09600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS09600;old_locus_tag=CCO40_09600;pseudo=true NZ_CP075116.1 Protein Homology CDS 2002371 2003565 . + 0 ID=cds-CCO40_RS09600;Parent=gene-CCO40_RS09600;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=CCO40_RS09600;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 2003711 2003851 . - . ID=gene-CCO40_RS09605;Name=CCO40_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09605;old_locus_tag=CCO40_09605 NZ_CP075116.1 Protein Homology CDS 2003711 2003851 . - 0 ID=cds-WP_001617922.1;Parent=gene-CCO40_RS09605;Dbxref=GenBank:WP_001617922.1;Name=WP_001617922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460815.3;locus_tag=CCO40_RS09605;product=hypothetical protein;protein_id=WP_001617922.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2004017 2004286 . - . ID=gene-CCO40_RS09610;Name=CCO40_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09610;old_locus_tag=CCO40_09610 NZ_CP075116.1 Protein Homology CDS 2004017 2004286 . - 0 ID=cds-WP_001752421.1;Parent=gene-CCO40_RS09610;Dbxref=GenBank:WP_001752421.1;Name=WP_001752421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460814.1;locus_tag=CCO40_RS09610;product=hypothetical protein;protein_id=WP_001752421.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2004656 2005075 . + . ID=gene-CCO40_RS09615;Name=CCO40_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09615;old_locus_tag=CCO40_09615 NZ_CP075116.1 Protein Homology CDS 2004656 2005075 . + 0 ID=cds-WP_000354407.1;Parent=gene-CCO40_RS09615;Dbxref=GenBank:WP_000354407.1;Name=WP_000354407.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460813.1;locus_tag=CCO40_RS09615;product=GNAT family N-acetyltransferase;protein_id=WP_000354407.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2005462 2005938 . - . ID=gene-CCO40_RS09620;Name=CCO40_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09620;old_locus_tag=CCO40_09620 NZ_CP075116.1 Protein Homology CDS 2005462 2005938 . - 0 ID=cds-WP_000030935.1;Parent=gene-CCO40_RS09620;Dbxref=GenBank:WP_000030935.1;Name=WP_000030935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030934.1;locus_tag=CCO40_RS09620;product=hypothetical protein;protein_id=WP_000030935.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2006268 2006663 . - . ID=gene-CCO40_RS09625;Name=CCO40_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09625;old_locus_tag=CCO40_09625 NZ_CP075116.1 Protein Homology CDS 2006268 2006663 . - 0 ID=cds-WP_000422882.1;Parent=gene-CCO40_RS09625;Dbxref=GenBank:WP_000422882.1;Name=WP_000422882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460812.1;locus_tag=CCO40_RS09625;product=DUF1398 domain-containing protein;protein_id=WP_000422882.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2007347 2008069 . + . ID=gene-CCO40_RS09630;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=protein_coding;locus_tag=CCO40_RS09630;old_locus_tag=CCO40_09630 NZ_CP075116.1 Protein Homology CDS 2007347 2008069 . + 0 ID=cds-WP_094889327.1;Parent=gene-CCO40_RS09630;Dbxref=GenBank:WP_094889327.1;Name=WP_094889327.1;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=CCO40_RS09630;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;protein_id=WP_094889327.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2008354 2008518 . + . ID=gene-CCO40_RS09635;Name=CCO40_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09635;old_locus_tag=CCO40_09635 NZ_CP075116.1 Protein Homology CDS 2008354 2008518 . + 0 ID=cds-WP_001134856.1;Parent=gene-CCO40_RS09635;Dbxref=GenBank:WP_001134856.1;Name=WP_001134856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=CCO40_RS09635;product=membrane protein;protein_id=WP_001134856.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2008509 2008724 . + . ID=gene-CCO40_RS22625;Name=CCO40_RS22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22625 NZ_CP075116.1 Protein Homology CDS 2008509 2008724 . + 0 ID=cds-WP_001574231.1;Parent=gene-CCO40_RS22625;Dbxref=GenBank:WP_001574231.1;Name=WP_001574231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529227.1;locus_tag=CCO40_RS22625;product=hypothetical protein;protein_id=WP_001574231.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2008742 2009392 . + . ID=gene-CCO40_RS09640;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=CCO40_RS09640;old_locus_tag=CCO40_09640 NZ_CP075116.1 Protein Homology CDS 2008742 2009392 . + 0 ID=cds-WP_000986176.1;Parent=gene-CCO40_RS09640;Dbxref=GenBank:WP_000986176.1;Name=WP_000986176.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=CCO40_RS09640;product=protein-serine/threonine phosphatase;protein_id=WP_000986176.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2009411 2009602 . - . ID=gene-CCO40_RS09645;Name=CCO40_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09645;old_locus_tag=CCO40_09645 NZ_CP075116.1 Protein Homology CDS 2009411 2009602 . - 0 ID=cds-WP_000457838.1;Parent=gene-CCO40_RS09645;Dbxref=GenBank:WP_000457838.1;Name=WP_000457838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460808.1;locus_tag=CCO40_RS09645;product=YdfD/YebW family protein;protein_id=WP_000457838.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2009713 2009949 . - . ID=gene-CCO40_RS09650;Name=CCO40_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09650;old_locus_tag=CCO40_09650 NZ_CP075116.1 Protein Homology CDS 2009713 2009949 . - 0 ID=cds-WP_024131167.1;Parent=gene-CCO40_RS09650;Dbxref=GenBank:WP_024131167.1;Name=WP_024131167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=CCO40_RS09650;product=YebV family protein;protein_id=WP_024131167.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2010067 2011506 . - . ID=gene-CCO40_RS09655;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=CCO40_RS09655;old_locus_tag=CCO40_09655 NZ_CP075116.1 Protein Homology CDS 2010067 2011506 . - 0 ID=cds-WP_001670762.1;Parent=gene-CCO40_RS09655;Dbxref=GenBank:WP_001670762.1;Name=WP_001670762.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460806.1;locus_tag=CCO40_RS09655;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_001670762.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2011584 2014217 . - . ID=gene-CCO40_RS09660;Name=CCO40_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09660;old_locus_tag=CCO40_09660 NZ_CP075116.1 Protein Homology CDS 2011584 2014217 . - 0 ID=cds-WP_170930890.1;Parent=gene-CCO40_RS09660;Dbxref=GenBank:WP_170930890.1;Name=WP_170930890.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=CCO40_RS09660;product=PqiB family protein;protein_id=WP_170930890.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2014186 2015469 . - . ID=gene-CCO40_RS09665;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=CCO40_RS09665;old_locus_tag=CCO40_09665 NZ_CP075116.1 Protein Homology CDS 2014186 2015469 . - 0 ID=cds-WP_001207294.1;Parent=gene-CCO40_RS09665;Dbxref=GenBank:WP_001207294.1;Name=WP_001207294.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=CCO40_RS09665;product=membrane integrity lipid transport subunit YebS;protein_id=WP_001207294.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2015598 2016095 . + . ID=gene-CCO40_RS09670;Name=msrC;gbkey=Gene;gene=msrC;gene_biotype=protein_coding;locus_tag=CCO40_RS09670;old_locus_tag=CCO40_09670 NZ_CP075116.1 Protein Homology CDS 2015598 2016095 . + 0 ID=cds-WP_001518229.1;Parent=gene-CCO40_RS09670;Dbxref=GenBank:WP_001518229.1;Name=WP_001518229.1;Note=Replaces NBR011098.;Ontology_term=GO:0033745;gbkey=CDS;gene=msrC;go_function=L-methionine (R)-S-oxide reductase activity|0033745||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=CCO40_RS09670;product=free L-methionine (R)-S-oxide reductase MsrC;protein_id=WP_001518229.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2016193 2016879 . + . ID=gene-CCO40_RS09675;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=CCO40_RS09675;old_locus_tag=CCO40_09675 NZ_CP075116.1 Protein Homology CDS 2016193 2016879 . + 0 ID=cds-WP_000431401.1;Parent=gene-CCO40_RS09675;Dbxref=GenBank:WP_000431401.1;Name=WP_000431401.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460802.1;locus_tag=CCO40_RS09675;product=RNA chaperone ProQ;protein_id=WP_000431401.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2016899 2018947 . + . ID=gene-CCO40_RS09680;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;gene_synonym=tsp;locus_tag=CCO40_RS09680;old_locus_tag=CCO40_09680 NZ_CP075116.1 Protein Homology CDS 2016899 2018947 . + 0 ID=cds-WP_001091237.1;Parent=gene-CCO40_RS09680;Dbxref=GenBank:WP_001091237.1;Name=WP_001091237.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=CCO40_RS09680;product=carboxy terminal-processing peptidase;protein_id=WP_001091237.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2019141 2020022 . + . ID=gene-CCO40_RS09685;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=CCO40_RS09685;old_locus_tag=CCO40_09685 NZ_CP075116.1 Protein Homology CDS 2019141 2020022 . + 0 ID=cds-WP_000984498.1;Parent=gene-CCO40_RS09685;Dbxref=GenBank:WP_000984498.1;Name=WP_000984498.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=CCO40_RS09685;product=protease HtpX;protein_id=WP_000984498.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2020070 2021443 . - . ID=gene-CCO40_RS09690;Name=CCO40_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09690;old_locus_tag=CCO40_09690 NZ_CP075116.1 Protein Homology CDS 2020070 2021443 . - 0 ID=cds-WP_094889325.1;Parent=gene-CCO40_RS09690;Dbxref=GenBank:WP_094889325.1;Name=WP_094889325.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460799.1;locus_tag=CCO40_RS09690;product=MFS transporter;protein_id=WP_094889325.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2021619 2022410 . + . ID=gene-CCO40_RS09695;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=CCO40_RS09695;old_locus_tag=CCO40_09695 NZ_CP075116.1 Protein Homology CDS 2021619 2022410 . + 0 ID=cds-WP_001262195.1;Parent=gene-CCO40_RS09695;Dbxref=GenBank:WP_001262195.1;Name=WP_001262195.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460798.1;locus_tag=CCO40_RS09695;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262195.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2022622 2022861 . - . ID=gene-CCO40_RS09700;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=CCO40_RS09700;old_locus_tag=CCO40_09700 NZ_CP075116.1 Protein Homology CDS 2022622 2022861 . - 0 ID=cds-WP_001236777.1;Parent=gene-CCO40_RS09700;Dbxref=GenBank:WP_001236777.1;Name=WP_001236777.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=CCO40_RS09700;product=invasion protein YobH;protein_id=WP_001236777.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2023019 2023162 . + . ID=gene-CCO40_RS09705;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=CCO40_RS09705;old_locus_tag=CCO40_09705 NZ_CP075116.1 Protein Homology CDS 2023019 2023162 . + 0 ID=cds-WP_000714547.1;Parent=gene-CCO40_RS09705;Dbxref=GenBank:WP_000714547.1;Name=WP_000714547.1;Ontology_term=GO:0046677;gbkey=CDS;gene=mgrB;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460796.1;locus_tag=CCO40_RS09705;product=PhoP/PhoQ regulatory lipoprotein MgrB;protein_id=WP_000714547.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2023233 2023520 . + . ID=gene-CCO40_RS09710;Name=CCO40_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09710;old_locus_tag=CCO40_09710 NZ_CP075116.1 Protein Homology CDS 2023233 2023520 . + 0 ID=cds-WP_001000660.1;Parent=gene-CCO40_RS09710;Dbxref=GenBank:WP_001000660.1;Name=WP_001000660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460795.1;locus_tag=CCO40_RS09710;product=YebO family protein;protein_id=WP_001000660.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2024169 2024312 . + . ID=gene-CCO40_RS09715;Name=CCO40_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09715;old_locus_tag=CCO40_09715 NZ_CP075116.1 Protein Homology CDS 2024169 2024312 . + 0 ID=cds-WP_001537930.1;Parent=gene-CCO40_RS09715;Dbxref=GenBank:WP_001537930.1;Name=WP_001537930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=CCO40_RS09715;product=DUF2627 domain-containing protein;protein_id=WP_001537930.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2024325 2024534 . + . ID=gene-CCO40_RS09720;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO40_RS09720;old_locus_tag=CCO40_09720 NZ_CP075116.1 Protein Homology CDS 2024325 2024534 . + 0 ID=cds-WP_001062678.1;Parent=gene-CCO40_RS09720;Dbxref=GenBank:WP_001062678.1;Name=WP_001062678.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=CCO40_RS09720;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2024754 2026499 . + . ID=gene-CCO40_RS09725;Name=ftsI2;gbkey=Gene;gene=ftsI2;gene_biotype=protein_coding;locus_tag=CCO40_RS09725;old_locus_tag=CCO40_09725 NZ_CP075116.1 Protein Homology CDS 2024754 2026499 . + 0 ID=cds-WP_000730322.1;Parent=gene-CCO40_RS09725;Dbxref=GenBank:WP_000730322.1;Name=WP_000730322.1;gbkey=CDS;gene=ftsI2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460792.1;locus_tag=CCO40_RS09725;product=peptidoglycan DD-transpeptidase FtsI2/PBP3(PARA);protein_id=WP_000730322.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2026565 2027374 . + . ID=gene-CCO40_RS09730;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=CCO40_RS09730;old_locus_tag=CCO40_09730 NZ_CP075116.1 Protein Homology CDS 2026565 2027374 . + 0 ID=cds-WP_000010923.1;Parent=gene-CCO40_RS09730;Dbxref=GenBank:WP_000010923.1;Name=WP_000010923.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460791.1;locus_tag=CCO40_RS09730;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_000010923.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2027371 2027937 . - . ID=gene-CCO40_RS09735;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=CCO40_RS09735;old_locus_tag=CCO40_09735 NZ_CP075116.1 Protein Homology CDS 2027371 2027937 . - 0 ID=cds-WP_001518359.1;Parent=gene-CCO40_RS09735;Dbxref=GenBank:WP_001518359.1;Name=WP_001518359.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=CCO40_RS09735;product=manganese efflux pump MntP;protein_id=WP_001518359.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2028347 2028805 . - . ID=gene-CCO40_RS09740;Name=CCO40_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09740;old_locus_tag=CCO40_09740 NZ_CP075116.1 Protein Homology CDS 2028347 2028805 . - 0 ID=cds-WP_000156280.1;Parent=gene-CCO40_RS09740;Dbxref=GenBank:WP_000156280.1;Name=WP_000156280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=CCO40_RS09740;product=DUF986 family protein;protein_id=WP_000156280.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2028863 2029714 . - . ID=gene-CCO40_RS09745;Name=CCO40_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09745;old_locus_tag=CCO40_09745 NZ_CP075116.1 Protein Homology CDS 2028863 2029714 . - 0 ID=cds-WP_001518647.1;Parent=gene-CCO40_RS09745;Dbxref=GenBank:WP_001518647.1;Name=WP_001518647.1;Ontology_term=GO:0009401,GO:0015761,GO:0022870,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-mannose phosphotransferase system transporter activity|0022870||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,mannose transmembrane transport|0015761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228151.1;locus_tag=CCO40_RS09745;product=PTS mannose transporter subunit IID;protein_id=WP_001518647.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2029727 2030527 . - . ID=gene-CCO40_RS09750;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=CCO40_RS09750;old_locus_tag=CCO40_09750 NZ_CP075116.1 Protein Homology CDS 2029727 2030527 . - 0 ID=cds-WP_000406918.1;Parent=gene-CCO40_RS09750;Dbxref=GenBank:WP_000406918.1;Name=WP_000406918.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=CCO40_RS09750;product=PTS mannose transporter subunit IIC;protein_id=WP_000406918.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2030580 2031548 . - . ID=gene-CCO40_RS09755;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=CCO40_RS09755;old_locus_tag=CCO40_09755 NZ_CP075116.1 Protein Homology CDS 2030580 2031548 . - 0 ID=cds-WP_000150521.1;Parent=gene-CCO40_RS09755;Dbxref=GenBank:WP_000150521.1;Name=WP_000150521.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460786.1;locus_tag=CCO40_RS09755;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150521.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2031866 2032033 . + . ID=gene-CCO40_RS22690;Name=CCO40_RS22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22690 NZ_CP075116.1 Protein Homology CDS 2031866 2032033 . + 0 ID=cds-WP_370739650.1;Parent=gene-CCO40_RS22690;Dbxref=GenBank:WP_370739650.1;Name=WP_370739650.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046943.3;locus_tag=CCO40_RS22690;product=protein YoaL;protein_id=WP_370739650.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2032021 2033580 . + . ID=gene-CCO40_RS09760;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=CCO40_RS09760;old_locus_tag=CCO40_09760 NZ_CP075116.1 Protein Homology CDS 2032021 2033580 . + 0 ID=cds-WP_000421815.1;Parent=gene-CCO40_RS09760;Dbxref=GenBank:WP_000421815.1;Name=WP_000421815.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460784.2;locus_tag=CCO40_RS09760;product=CNNM family cation transport protein YoaE;protein_id=WP_000421815.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2033602 2035203 . - . ID=gene-CCO40_RS09765;Name=pdeD;gbkey=Gene;gene=pdeD;gene_biotype=protein_coding;locus_tag=CCO40_RS09765;old_locus_tag=CCO40_09765 NZ_CP075116.1 Protein Homology CDS 2033602 2035203 . - 0 ID=cds-WP_001192530.1;Parent=gene-CCO40_RS09765;Dbxref=GenBank:WP_001192530.1;Name=WP_001192530.1;gbkey=CDS;gene=pdeD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192512.1;locus_tag=CCO40_RS09765;product=cyclic di-3'%2C5'-guanosine monophosphate phosphodiesterase PdeD;protein_id=WP_001192530.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2035341 2036705 . - . ID=gene-CCO40_RS09770;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=CCO40_RS09770;old_locus_tag=CCO40_09770 NZ_CP075116.1 Protein Homology CDS 2035341 2036705 . - 0 ID=cds-WP_000624274.1;Parent=gene-CCO40_RS09770;Dbxref=GenBank:WP_000624274.1;Name=WP_000624274.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460782.1;locus_tag=CCO40_RS09770;product=L-serine ammonia-lyase;protein_id=WP_000624274.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2036969 2037547 . - . ID=gene-CCO40_RS09775;Name=CCO40_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09775;old_locus_tag=CCO40_09775 NZ_CP075116.1 Protein Homology CDS 2036969 2037547 . - 0 ID=cds-WP_000381531.1;Parent=gene-CCO40_RS09775;Dbxref=GenBank:WP_000381531.1;Name=WP_000381531.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460781.1;locus_tag=CCO40_RS09775;product=CoA pyrophosphatase;protein_id=WP_000381531.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2037551 2038915 . - . ID=gene-CCO40_RS09780;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=CCO40_RS09780;old_locus_tag=CCO40_09780 NZ_CP075116.1 Protein Homology CDS 2037551 2038915 . - 0 ID=cds-WP_000978468.1;Parent=gene-CCO40_RS09780;Dbxref=GenBank:WP_000978468.1;Name=WP_000978468.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460780.1;locus_tag=CCO40_RS09780;product=aminodeoxychorismate synthase component 1;protein_id=WP_000978468.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2038996 2039175 . + . ID=gene-CCO40_RS09785;Name=CCO40_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09785;old_locus_tag=CCO40_09785 NZ_CP075116.1 Protein Homology CDS 2038996 2039175 . + 0 ID=cds-WP_000457328.1;Parent=gene-CCO40_RS09785;Dbxref=GenBank:WP_000457328.1;Name=WP_000457328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460779.1;locus_tag=CCO40_RS09785;product=YoaH family protein;protein_id=WP_000457328.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2039181 2039525 . - . ID=gene-CCO40_RS09790;Name=CCO40_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09790;old_locus_tag=CCO40_09790 NZ_CP075116.1 Protein Homology CDS 2039181 2039525 . - 0 ID=cds-WP_000029550.1;Parent=gene-CCO40_RS09790;Dbxref=GenBank:WP_000029550.1;Name=WP_000029550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460778.1;locus_tag=CCO40_RS09790;product=RidA family protein;protein_id=WP_000029550.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2039656 2041566 . + . ID=gene-CCO40_RS09795;Name=yoaA;gbkey=Gene;gene=yoaA;gene_biotype=protein_coding;locus_tag=CCO40_RS09795;old_locus_tag=CCO40_09795 NZ_CP075116.1 Protein Homology CDS 2039656 2041566 . + 0 ID=cds-WP_000128807.1;Parent=gene-CCO40_RS09795;Dbxref=GenBank:WP_000128807.1;Name=WP_000128807.1;Ontology_term=GO:0006281;gbkey=CDS;gene=yoaA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460777.1;locus_tag=CCO40_RS09795;product=DNA repair helicase YoaA;protein_id=WP_000128807.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2041624 2042319 . + . ID=gene-CCO40_RS09800;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=CCO40_RS09800;old_locus_tag=CCO40_09800 NZ_CP075116.1 Protein Homology CDS 2041624 2042319 . + 0 ID=cds-WP_001221014.1;Parent=gene-CCO40_RS09800;Dbxref=GenBank:WP_001221014.1;Name=WP_001221014.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460776.1;locus_tag=CCO40_RS09800;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001221014.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2042391 2042972 . + . ID=gene-CCO40_RS09805;Name=CCO40_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09805;old_locus_tag=CCO40_09805 NZ_CP075116.1 Protein Homology CDS 2042391 2042972 . + 0 ID=cds-WP_000290594.1;Parent=gene-CCO40_RS09805;Dbxref=GenBank:WP_000290594.1;Name=WP_000290594.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460775.1;locus_tag=CCO40_RS09805;product=Slp family lipoprotein;protein_id=WP_000290594.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2043177 2044862 . + . ID=gene-CCO40_RS09810;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=CCO40_RS09810;old_locus_tag=CCO40_09810 NZ_CP075116.1 Protein Homology CDS 2043177 2044862 . + 0 ID=cds-WP_000758418.1;Parent=gene-CCO40_RS09810;Dbxref=GenBank:WP_000758418.1;Name=WP_000758418.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460774.1;locus_tag=CCO40_RS09810;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_000758418.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2044935 2046062 . + . ID=gene-CCO40_RS09815;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=CCO40_RS09815;old_locus_tag=CCO40_09815 NZ_CP075116.1 Protein Homology CDS 2044935 2046062 . + 0 ID=cds-WP_023227146.1;Parent=gene-CCO40_RS09815;Dbxref=GenBank:WP_023227146.1;Name=WP_023227146.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416318.1;locus_tag=CCO40_RS09815;product=ribonuclease D;protein_id=WP_023227146.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2046184 2046450 . - . ID=gene-CCO40_RS09820;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=CCO40_RS09820;old_locus_tag=CCO40_09820 NZ_CP075116.1 Protein Homology CDS 2046184 2046450 . - 0 ID=cds-WP_001185666.1;Parent=gene-CCO40_RS09820;Dbxref=GenBank:WP_001185666.1;Name=WP_001185666.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460772.1;locus_tag=CCO40_RS09820;product=cell division topological specificity factor MinE;protein_id=WP_001185666.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2046454 2047266 . - . ID=gene-CCO40_RS09825;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=CCO40_RS09825;old_locus_tag=CCO40_09825 NZ_CP075116.1 Protein Homology CDS 2046454 2047266 . - 0 ID=cds-WP_000101047.1;Parent=gene-CCO40_RS09825;Dbxref=GenBank:WP_000101047.1;Name=WP_000101047.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=CCO40_RS09825;product=septum site-determining protein MinD;protein_id=WP_000101047.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2047290 2047997 . - . ID=gene-CCO40_RS09830;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=CCO40_RS09830;old_locus_tag=CCO40_09830 NZ_CP075116.1 Protein Homology CDS 2047290 2047997 . - 0 ID=cds-WP_000072527.1;Parent=gene-CCO40_RS09830;Dbxref=GenBank:WP_000072527.1;Name=WP_000072527.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460770.1;locus_tag=CCO40_RS09830;product=septum site-determining protein MinC;protein_id=WP_000072527.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2048123 2048416 . + . ID=gene-CCO40_RS09835;Name=CCO40_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09835;old_locus_tag=CCO40_09835 NZ_CP075116.1 Protein Homology CDS 2048123 2048416 . + 0 ID=cds-WP_001525604.1;Parent=gene-CCO40_RS09835;Dbxref=GenBank:WP_001525604.1;Name=WP_001525604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=CCO40_RS09835;product=YcgL domain-containing protein;protein_id=WP_001525604.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2048466 2049125 . + . ID=gene-CCO40_RS09840;Name=CCO40_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09840;old_locus_tag=CCO40_09840 NZ_CP075116.1 Protein Homology CDS 2048466 2049125 . + 0 ID=cds-WP_001519895.1;Parent=gene-CCO40_RS09840;Dbxref=GenBank:WP_001519895.1;Name=WP_001519895.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460768.1;locus_tag=CCO40_RS09840;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_001519895.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2049218 2049664 . + . ID=gene-CCO40_RS09845;Name=ycgN;gbkey=Gene;gene=ycgN;gene_biotype=protein_coding;locus_tag=CCO40_RS09845;old_locus_tag=CCO40_09845 NZ_CP075116.1 Protein Homology CDS 2049218 2049664 . + 0 ID=cds-WP_001285703.1;Parent=gene-CCO40_RS09845;Dbxref=GenBank:WP_001285703.1;Name=WP_001285703.1;gbkey=CDS;gene=ycgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=CCO40_RS09845;product=cysteine cluster protein YcgN;protein_id=WP_001285703.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2050016 2050153 . + . ID=gene-CCO40_RS09850;Name=CCO40_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09850;old_locus_tag=CCO40_09850 NZ_CP075116.1 Protein Homology CDS 2050016 2050153 . + 0 ID=cds-WP_001519337.1;Parent=gene-CCO40_RS09850;Dbxref=GenBank:WP_001519337.1;Name=WP_001519337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=CCO40_RS09850;product=hypothetical protein;protein_id=WP_001519337.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2050345 2050518 . + . ID=gene-CCO40_RS09855;Name=CCO40_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09855;old_locus_tag=CCO40_09855 NZ_CP075116.1 Protein Homology CDS 2050345 2050518 . + 0 ID=cds-WP_001083582.1;Parent=gene-CCO40_RS09855;Dbxref=GenBank:WP_001083582.1;Name=WP_001083582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460765.1;locus_tag=CCO40_RS09855;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001083582.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2050590 2050931 . - . ID=gene-CCO40_RS09860;Name=CCO40_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09860;old_locus_tag=CCO40_09860 NZ_CP075116.1 Protein Homology CDS 2050590 2050931 . - 0 ID=cds-WP_000018967.1;Parent=gene-CCO40_RS09860;Dbxref=GenBank:WP_000018967.1;Name=WP_000018967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460764.1;locus_tag=CCO40_RS09860;product=TehB family protein;protein_id=WP_000018967.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2051040 2051570 . - . ID=gene-CCO40_RS09865;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=CCO40_RS09865;old_locus_tag=CCO40_09865 NZ_CP075116.1 Protein Homology CDS 2051040 2051570 . - 0 ID=cds-WP_000943475.1;Parent=gene-CCO40_RS09865;Dbxref=GenBank:WP_000943475.1;Name=WP_000943475.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460763.1;locus_tag=CCO40_RS09865;product=disulfide bond formation protein DsbB;protein_id=WP_000943475.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2051712 2053256 . - . ID=gene-CCO40_RS09870;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=CCO40_RS09870;old_locus_tag=CCO40_09870 NZ_CP075116.1 Protein Homology CDS 2051712 2053256 . - 0 ID=cds-WP_000406446.1;Parent=gene-CCO40_RS09870;Dbxref=GenBank:WP_000406446.1;Name=WP_000406446.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460762.1;locus_tag=CCO40_RS09870;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_000406446.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2053476 2054195 . + . ID=gene-CCO40_RS09875;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=CCO40_RS09875;old_locus_tag=CCO40_09875 NZ_CP075116.1 Protein Homology CDS 2053476 2054195 . + 0 ID=cds-WP_000234826.1;Parent=gene-CCO40_RS09875;Dbxref=GenBank:WP_000234826.1;Name=WP_000234826.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460761.1;locus_tag=CCO40_RS09875;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234826.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2054242 2055774 . - . ID=gene-CCO40_RS09880;Name=CCO40_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09880;old_locus_tag=CCO40_09880 NZ_CP075116.1 Protein Homology CDS 2054242 2055774 . - 0 ID=cds-WP_000190832.1;Parent=gene-CCO40_RS09880;Dbxref=GenBank:WP_000190832.1;Name=WP_000190832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460760.3;locus_tag=CCO40_RS09880;product=SpoVR family protein;protein_id=WP_000190832.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2056097 2057395 . + . ID=gene-CCO40_RS09885;Name=CCO40_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09885;old_locus_tag=CCO40_09885 NZ_CP075116.1 Protein Homology CDS 2056097 2057395 . + 0 ID=cds-WP_001266938.1;Parent=gene-CCO40_RS09885;Dbxref=GenBank:WP_001266938.1;Name=WP_001266938.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460759.1;locus_tag=CCO40_RS09885;product=D-amino acid dehydrogenase;protein_id=WP_001266938.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2057409 2058479 . + . ID=gene-CCO40_RS09890;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=CCO40_RS09890;old_locus_tag=CCO40_09890 NZ_CP075116.1 Protein Homology CDS 2057409 2058479 . + 0 ID=cds-WP_000197903.1;Parent=gene-CCO40_RS09890;Dbxref=GenBank:WP_000197903.1;Name=WP_000197903.1;Ontology_term=GO:0042853,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=CCO40_RS09890;product=catabolic alanine racemase DadX;protein_id=WP_000197903.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 2058511 2058603 . + . ID=gene-CCO40_RS22770;Name=CCO40_RS22770;end_range=2058603,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22770;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 2058511 2058603 . + 0 ID=cds-CCO40_RS22770;Parent=gene-CCO40_RS22770;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2058603,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049075.2;locus_tag=CCO40_RS22770;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 2058607 2060274 . - . ID=gene-CCO40_RS09895;Name=CCO40_RS09895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS09895;old_locus_tag=CCO40_09895;partial=true;pseudo=true;start_range=.,2058607 NZ_CP075116.1 Protein Homology CDS 2058607 2060274 . - 0 ID=cds-CCO40_RS09895;Parent=gene-CCO40_RS09895;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF003714.0;locus_tag=CCO40_RS09895;partial=true;product=potassium/proton antiporter;pseudo=true;start_range=.,2058607;transl_table=11 NZ_CP075116.1 RefSeq gene 2060371 2061285 . - . ID=gene-CCO40_RS09900;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=CCO40_RS09900;old_locus_tag=CCO40_09900 NZ_CP075116.1 Protein Homology CDS 2060371 2061285 . - 0 ID=cds-WP_000051613.1;Parent=gene-CCO40_RS09900;Dbxref=GenBank:WP_000051613.1;Name=WP_000051613.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460756.1;locus_tag=CCO40_RS09900;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_000051613.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2061456 2062067 . + . ID=gene-CCO40_RS09905;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=CCO40_RS09905;old_locus_tag=CCO40_09905 NZ_CP075116.1 Protein Homology CDS 2061456 2062067 . + 0 ID=cds-WP_000776974.1;Parent=gene-CCO40_RS09905;Dbxref=GenBank:WP_000776974.1;Name=WP_000776974.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460755.1;locus_tag=CCO40_RS09905;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_000776974.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2062081 2062815 . - . ID=gene-CCO40_RS09910;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=CCO40_RS09910;old_locus_tag=CCO40_09910 NZ_CP075116.1 Protein Homology CDS 2062081 2062815 . - 0 ID=cds-WP_020438150.1;Parent=gene-CCO40_RS09910;Dbxref=GenBank:WP_020438150.1;Name=WP_020438150.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=CCO40_RS09910;product=flagellar brake protein YcgR;protein_id=WP_020438150.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2062984 2063238 . + . ID=gene-CCO40_RS09915;Name=CCO40_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09915;old_locus_tag=CCO40_09915 NZ_CP075116.1 Protein Homology CDS 2062984 2063238 . + 0 ID=cds-WP_000511320.1;Parent=gene-CCO40_RS09915;Dbxref=GenBank:WP_000511320.1;Name=WP_000511320.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460753.1;locus_tag=CCO40_RS09915;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000511320.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2063301 2065013 . - . ID=gene-CCO40_RS09920;Name=CCO40_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09920;old_locus_tag=CCO40_09920 NZ_CP075116.1 Protein Homology CDS 2063301 2065013 . - 0 ID=cds-WP_094889324.1;Parent=gene-CCO40_RS09920;Dbxref=GenBank:WP_094889324.1;Name=WP_094889324.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=CCO40_RS09920;product=alpha%2Calpha-trehalase;protein_id=WP_094889324.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2065227 2066501 . - . ID=gene-CCO40_RS09925;Name=CCO40_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09925;old_locus_tag=CCO40_09925 NZ_CP075116.1 Protein Homology CDS 2065227 2066501 . - 0 ID=cds-WP_001526439.1;Parent=gene-CCO40_RS09925;Dbxref=GenBank:WP_001526439.1;Name=WP_001526439.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=CCO40_RS09925;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_001526439.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2066896 2066985 . - . ID=gene-CCO40_RS09930;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=CCO40_RS09930;old_locus_tag=CCO40_09930 NZ_CP075116.1 Protein Homology CDS 2066896 2066985 . - 0 ID=cds-WP_000270303.1;Parent=gene-CCO40_RS09930;Dbxref=GenBank:WP_000270303.1;Name=WP_000270303.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=CCO40_RS09930;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270303.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2066998 2068134 . - . ID=gene-CCO40_RS09935;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=CCO40_RS09935;old_locus_tag=CCO40_09935 NZ_CP075116.1 Protein Homology CDS 2066998 2068134 . - 0 ID=cds-WP_000888110.1;Parent=gene-CCO40_RS09935;Dbxref=GenBank:WP_000888110.1;Name=WP_000888110.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460749.1;locus_tag=CCO40_RS09935;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000888110.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2068146 2069690 . - . ID=gene-CCO40_RS09940;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=CCO40_RS09940;old_locus_tag=CCO40_09940 NZ_CP075116.1 Protein Homology CDS 2068146 2069690 . - 0 ID=cds-WP_094889323.1;Parent=gene-CCO40_RS09940;Dbxref=GenBank:WP_094889323.1;Name=WP_094889323.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460748.1;locus_tag=CCO40_RS09940;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_094889323.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2069765 2070613 . - . ID=gene-CCO40_RS09945;Name=CCO40_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09945;old_locus_tag=CCO40_09945 NZ_CP075116.1 Protein Homology CDS 2069765 2070613 . - 0 ID=cds-WP_000063377.1;Parent=gene-CCO40_RS09945;Dbxref=GenBank:WP_000063377.1;Name=WP_000063377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460747.1;locus_tag=CCO40_RS09945;product=hydrogenase expression/formation protein;protein_id=WP_000063377.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2070610 2071014 . - . ID=gene-CCO40_RS09950;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=CCO40_RS09950;old_locus_tag=CCO40_09950 NZ_CP075116.1 Protein Homology CDS 2070610 2071014 . - 0 ID=cds-WP_001615886.1;Parent=gene-CCO40_RS09950;Dbxref=GenBank:WP_001615886.1;Name=WP_001615886.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460746.1;locus_tag=CCO40_RS09950;product=hydrogenase-1 operon protein HyaE;protein_id=WP_001615886.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2071004 2071600 . - . ID=gene-CCO40_RS09955;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=CCO40_RS09955;old_locus_tag=CCO40_09955 NZ_CP075116.1 Protein Homology CDS 2071004 2071600 . - 0 ID=cds-WP_079834964.1;Parent=gene-CCO40_RS09955;Dbxref=GenBank:WP_079834964.1;Name=WP_079834964.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460745.1;locus_tag=CCO40_RS09955;product=hydrogenase 1 maturation protease;protein_id=WP_079834964.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2071597 2072328 . - . ID=gene-CCO40_RS09960;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=CCO40_RS09960;old_locus_tag=CCO40_09960 NZ_CP075116.1 Protein Homology CDS 2071597 2072328 . - 0 ID=cds-WP_000147036.1;Parent=gene-CCO40_RS09960;Dbxref=GenBank:WP_000147036.1;Name=WP_000147036.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460744.1;locus_tag=CCO40_RS09960;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_000147036.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2072347 2074140 . - . ID=gene-CCO40_RS09965;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=CCO40_RS09965;old_locus_tag=CCO40_09965 NZ_CP075116.1 Protein Homology CDS 2072347 2074140 . - 0 ID=cds-WP_094889322.1;Parent=gene-CCO40_RS09965;Dbxref=GenBank:WP_094889322.1;Name=WP_094889322.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460743.1;locus_tag=CCO40_RS09965;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_094889322.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2074137 2075255 . - . ID=gene-CCO40_RS09970;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=CCO40_RS09970;old_locus_tag=CCO40_09970 NZ_CP075116.1 Protein Homology CDS 2074137 2075255 . - 0 ID=cds-WP_001058311.1;Parent=gene-CCO40_RS09970;Dbxref=GenBank:WP_001058311.1;Name=WP_001058311.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=CCO40_RS09970;product=hydrogenase 1 small subunit;protein_id=WP_001058311.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2075750 2077015 . + . ID=gene-CCO40_RS09975;Name=CCO40_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09975;old_locus_tag=CCO40_09975 NZ_CP075116.1 Protein Homology CDS 2075750 2077015 . + 0 ID=cds-WP_094889321.1;Parent=gene-CCO40_RS09975;Dbxref=GenBank:WP_094889321.1;Name=WP_094889321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460741.1;locus_tag=CCO40_RS09975;product=DUF4427 domain-containing protein;protein_id=WP_094889321.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2077491 2077946 . - . ID=gene-CCO40_RS09980;Name=CCO40_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09980;old_locus_tag=CCO40_09980 NZ_CP075116.1 Protein Homology CDS 2077491 2077946 . - 0 ID=cds-WP_000487335.1;Parent=gene-CCO40_RS09980;Dbxref=GenBank:WP_000487335.1;Name=WP_000487335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487332.1;locus_tag=CCO40_RS09980;product=hypothetical protein;protein_id=WP_000487335.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2077985 2078605 . - . ID=gene-CCO40_RS09985;Name=CCO40_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS09985;old_locus_tag=CCO40_09985 NZ_CP075116.1 Protein Homology CDS 2077985 2078605 . - 0 ID=cds-WP_170930891.1;Parent=gene-CCO40_RS09985;Dbxref=GenBank:WP_170930891.1;Name=WP_170930891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376822.1;locus_tag=CCO40_RS09985;product=hypothetical protein;protein_id=WP_170930891.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2079362 2080453 . - . ID=gene-CCO40_RS09990;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=CCO40_RS09990;old_locus_tag=CCO40_09990 NZ_CP075116.1 Protein Homology CDS 2079362 2080453 . - 0 ID=cds-WP_000505850.1;Parent=gene-CCO40_RS09990;Dbxref=GenBank:WP_000505850.1;Name=WP_000505850.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=CCO40_RS09990;product=redox-regulated ATPase YchF;protein_id=WP_000505850.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2080570 2081154 . - . ID=gene-CCO40_RS09995;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=CCO40_RS09995;old_locus_tag=CCO40_09995 NZ_CP075116.1 Protein Homology CDS 2080570 2081154 . - 0 ID=cds-WP_000985595.1;Parent=gene-CCO40_RS09995;Dbxref=GenBank:WP_000985595.1;Name=WP_000985595.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=CCO40_RS09995;product=aminoacyl-tRNA hydrolase;protein_id=WP_000985595.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2081430 2081708 . + . ID=gene-CCO40_RS10000;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=CCO40_RS10000;old_locus_tag=CCO40_10000 NZ_CP075116.1 Protein Homology CDS 2081430 2081708 . + 0 ID=cds-WP_000823878.1;Parent=gene-CCO40_RS10000;Dbxref=GenBank:WP_000823878.1;Name=WP_000823878.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460738.1;locus_tag=CCO40_RS10000;product=stress-induced protein YchH;protein_id=WP_000823878.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2081753 2083438 . - . ID=gene-CCO40_RS10005;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=CCO40_RS10005;old_locus_tag=CCO40_10005 NZ_CP075116.1 Protein Homology CDS 2081753 2083438 . - 0 ID=cds-WP_001037181.1;Parent=gene-CCO40_RS10005;Dbxref=GenBank:WP_001037181.1;Name=WP_001037181.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525165.1;locus_tag=CCO40_RS10005;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_001037181.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2083563 2084510 . - . ID=gene-CCO40_RS10010;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=CCO40_RS10010;old_locus_tag=CCO40_10010 NZ_CP075116.1 Protein Homology CDS 2083563 2084510 . - 0 ID=cds-WP_001518537.1;Parent=gene-CCO40_RS10010;Dbxref=GenBank:WP_001518537.1;Name=WP_001518537.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=CCO40_RS10010;product=ribose-phosphate diphosphokinase;protein_id=WP_001518537.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2084776 2085627 . - . ID=gene-CCO40_RS10015;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=CCO40_RS10015;old_locus_tag=CCO40_10015 NZ_CP075116.1 Protein Homology CDS 2084776 2085627 . - 0 ID=cds-WP_000988259.1;Parent=gene-CCO40_RS10015;Dbxref=GenBank:WP_000988259.1;Name=WP_000988259.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460735.1;locus_tag=CCO40_RS10015;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_000988259.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2085624 2086247 . - . ID=gene-CCO40_RS10020;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=CCO40_RS10020;old_locus_tag=CCO40_10020 NZ_CP075116.1 Protein Homology CDS 2085624 2086247 . - 0 ID=cds-WP_000174484.1;Parent=gene-CCO40_RS10020;Dbxref=GenBank:WP_000174484.1;Name=WP_000174484.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460734.1;locus_tag=CCO40_RS10020;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_000174484.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2086561 2087817 . + . ID=gene-CCO40_RS10025;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=CCO40_RS10025;old_locus_tag=CCO40_10025 NZ_CP075116.1 Protein Homology CDS 2086561 2087817 . + 0 ID=cds-WP_000173208.1;Parent=gene-CCO40_RS10025;Dbxref=GenBank:WP_000173208.1;Name=WP_000173208.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase (NADP+) activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=CCO40_RS10025;product=glutamyl-tRNA reductase;protein_id=WP_000173208.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2087858 2088940 . + . ID=gene-CCO40_RS10030;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=CCO40_RS10030;old_locus_tag=CCO40_10030 NZ_CP075116.1 Protein Homology CDS 2087858 2088940 . + 0 ID=cds-WP_000804703.1;Parent=gene-CCO40_RS10030;Dbxref=GenBank:WP_000804703.1;Name=WP_000804703.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=CCO40_RS10030;product=peptide chain release factor 1;protein_id=WP_000804703.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2088940 2089773 . + . ID=gene-CCO40_RS10035;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;gene_synonym=hemK;locus_tag=CCO40_RS10035;old_locus_tag=CCO40_10035 NZ_CP075116.1 Protein Homology CDS 2088940 2089773 . + 0 ID=cds-WP_023258912.1;Parent=gene-CCO40_RS10035;Dbxref=GenBank:WP_023258912.1;Name=WP_023258912.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=CCO40_RS10035;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_023258912.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2089770 2090159 . + . ID=gene-CCO40_RS10040;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=CCO40_RS10040;old_locus_tag=CCO40_10040 NZ_CP075116.1 Protein Homology CDS 2089770 2090159 . + 0 ID=cds-WP_000150667.1;Parent=gene-CCO40_RS10040;Dbxref=GenBank:WP_000150667.1;Name=WP_000150667.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460730.1;locus_tag=CCO40_RS10040;product=invasion regulator SirB2;protein_id=WP_000150667.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2090163 2090972 . + . ID=gene-CCO40_RS10045;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=CCO40_RS10045;old_locus_tag=CCO40_10045 NZ_CP075116.1 Protein Homology CDS 2090163 2090972 . + 0 ID=cds-WP_001257065.1;Parent=gene-CCO40_RS10045;Dbxref=GenBank:WP_001257065.1;Name=WP_001257065.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460729.1;locus_tag=CCO40_RS10045;product=invasion regulator SirB1;protein_id=WP_001257065.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2091010 2091864 . + . ID=gene-CCO40_RS10050;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=CCO40_RS10050;old_locus_tag=CCO40_10050 NZ_CP075116.1 Protein Homology CDS 2091010 2091864 . + 0 ID=cds-WP_000811046.1;Parent=gene-CCO40_RS10050;Dbxref=GenBank:WP_000811046.1;Name=WP_000811046.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460728.1;locus_tag=CCO40_RS10050;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811046.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2091917 2093017 . - . ID=gene-CCO40_RS10055;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=CCO40_RS10055;old_locus_tag=CCO40_10055 NZ_CP075116.1 Protein Homology CDS 2091917 2093017 . - 0 ID=cds-WP_000148418.1;Parent=gene-CCO40_RS10055;Dbxref=GenBank:WP_000148418.1;Name=WP_000148418.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460727.1;locus_tag=CCO40_RS10055;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_000148418.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2093284 2093514 . + . ID=gene-CCO40_RS10060;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=CCO40_RS10060;old_locus_tag=CCO40_10060 NZ_CP075116.1 Protein Homology CDS 2093284 2093514 . + 0 ID=cds-WP_001146392.1;Parent=gene-CCO40_RS10060;Dbxref=GenBank:WP_001146392.1;Name=WP_001146392.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=CCO40_RS10060;product=putative cation transport regulator ChaB;protein_id=WP_001146392.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2093594 2093947 . - . ID=gene-CCO40_RS10065;Name=CCO40_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10065;old_locus_tag=CCO40_10065 NZ_CP075116.1 Protein Homology CDS 2093594 2093947 . - 0 ID=cds-WP_001179795.1;Parent=gene-CCO40_RS10065;Dbxref=GenBank:WP_001179795.1;Name=WP_001179795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460725.1;locus_tag=CCO40_RS10065;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WP_001179795.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2094124 2095548 . + . ID=gene-CCO40_RS10070;Name=CCO40_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10070;old_locus_tag=CCO40_10070 NZ_CP075116.1 Protein Homology CDS 2094124 2095548 . + 0 ID=cds-WP_024131625.1;Parent=gene-CCO40_RS10070;Dbxref=GenBank:WP_024131625.1;Name=WP_024131625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=CCO40_RS10070;product=YchO/YchP family invasin;protein_id=WP_024131625.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2095549 2096199 . - . ID=gene-CCO40_RS10075;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=CCO40_RS10075;old_locus_tag=CCO40_10075 NZ_CP075116.1 Protein Homology CDS 2095549 2096199 . - 0 ID=cds-WP_001064598.1;Parent=gene-CCO40_RS10075;Dbxref=GenBank:WP_001064598.1;Name=WP_001064598.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460723.1;locus_tag=CCO40_RS10075;product=two-component system response regulator NarL;protein_id=WP_001064598.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2096192 2097988 . - . ID=gene-CCO40_RS10080;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=CCO40_RS10080;old_locus_tag=CCO40_10080 NZ_CP075116.1 Protein Homology CDS 2096192 2097988 . - 0 ID=cds-WP_094889320.1;Parent=gene-CCO40_RS10080;Dbxref=GenBank:WP_094889320.1;Name=WP_094889320.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=CCO40_RS10080;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_094889320.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2098329 2099726 . + . ID=gene-CCO40_RS10085;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=CCO40_RS10085;old_locus_tag=CCO40_10085 NZ_CP075116.1 Protein Homology CDS 2098329 2099726 . + 0 ID=cds-WP_000019848.1;Parent=gene-CCO40_RS10085;Dbxref=GenBank:WP_000019848.1;Name=WP_000019848.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460721.1;locus_tag=CCO40_RS10085;product=nitrate transporter NarK;protein_id=WP_000019848.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2100114 2103857 . + . ID=gene-CCO40_RS10090;Name=CCO40_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10090;old_locus_tag=CCO40_10090 NZ_CP075116.1 Protein Homology CDS 2100114 2103857 . + 0 ID=cds-WP_094889319.1;Parent=gene-CCO40_RS10090;Dbxref=GenBank:WP_094889319.1;Name=WP_094889319.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=CCO40_RS10090;product=nitrate reductase subunit alpha;protein_id=WP_094889319.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2103854 2105389 . + . ID=gene-CCO40_RS10095;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=CCO40_RS10095;old_locus_tag=CCO40_10095 NZ_CP075116.1 Protein Homology CDS 2103854 2105389 . + 0 ID=cds-WP_094889318.1;Parent=gene-CCO40_RS10095;Dbxref=GenBank:WP_094889318.1;Name=WP_094889318.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460719.1;locus_tag=CCO40_RS10095;product=nitrate reductase subunit beta;protein_id=WP_094889318.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2105386 2106096 . + . ID=gene-CCO40_RS10100;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=CCO40_RS10100;old_locus_tag=CCO40_10100 NZ_CP075116.1 Protein Homology CDS 2105386 2106096 . + 0 ID=cds-WP_094889317.1;Parent=gene-CCO40_RS10100;Dbxref=GenBank:WP_094889317.1;Name=WP_094889317.1;Ontology_term=GO:0051131;gbkey=CDS;gene=narJ;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=CCO40_RS10100;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_094889317.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2106096 2106773 . + . ID=gene-CCO40_RS10105;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=CCO40_RS10105;old_locus_tag=CCO40_10105 NZ_CP075116.1 Protein Homology CDS 2106096 2106773 . + 0 ID=cds-WP_000545594.1;Parent=gene-CCO40_RS10105;Dbxref=GenBank:WP_000545594.1;Name=WP_000545594.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460717.1;locus_tag=CCO40_RS10105;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000545594.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2107015 2108544 . + . ID=gene-CCO40_RS10110;Name=CCO40_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10110;old_locus_tag=CCO40_10110 NZ_CP075116.1 Protein Homology CDS 2107015 2108544 . + 0 ID=cds-WP_094889315.1;Parent=gene-CCO40_RS10110;Dbxref=GenBank:WP_094889315.1;Name=WP_094889315.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460716.1;locus_tag=CCO40_RS10110;product=tetratricopeptide repeat protein;protein_id=WP_094889315.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2108647 2108778 . - . ID=gene-CCO40_RS10115;Name=CCO40_RS10115;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO40_RS10115;old_locus_tag=CCO40_10115 NZ_CP075116.1 cmsearch ncRNA 2108647 2108778 . - . ID=rna-CCO40_RS10115;Parent=gene-CCO40_RS10115;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00391,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS10115;product=RtT sRNA NZ_CP075116.1 cmsearch exon 2108647 2108778 . - . ID=exon-CCO40_RS10115-1;Parent=rna-CCO40_RS10115;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00391,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS10115;product=RtT sRNA NZ_CP075116.1 RefSeq gene 2108822 2108953 . - . ID=gene-CCO40_RS10120;Name=CCO40_RS10120;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO40_RS10120;old_locus_tag=CCO40_10120 NZ_CP075116.1 cmsearch ncRNA 2108822 2108953 . - . ID=rna-CCO40_RS10120;Parent=gene-CCO40_RS10120;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00391,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS10120;product=RtT sRNA NZ_CP075116.1 cmsearch exon 2108822 2108953 . - . ID=exon-CCO40_RS10120-1;Parent=rna-CCO40_RS10120;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00391,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS10120;product=RtT sRNA NZ_CP075116.1 RefSeq gene 2108997 2109127 . - . ID=gene-CCO40_RS10125;Name=CCO40_RS10125;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO40_RS10125;old_locus_tag=CCO40_10125 NZ_CP075116.1 cmsearch ncRNA 2108997 2109127 . - . ID=rna-CCO40_RS10125;Parent=gene-CCO40_RS10125;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00391,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS10125;product=RtT sRNA NZ_CP075116.1 cmsearch exon 2108997 2109127 . - . ID=exon-CCO40_RS10125-1;Parent=rna-CCO40_RS10125;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00391,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS10125;product=RtT sRNA NZ_CP075116.1 RefSeq gene 2109171 2109255 . - . ID=gene-CCO40_RS10130;Name=CCO40_RS10130;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS10130;old_locus_tag=CCO40_10130 NZ_CP075116.1 tRNAscan-SE tRNA 2109171 2109255 . - . ID=rna-CCO40_RS10130;Parent=gene-CCO40_RS10130;anticodon=(pos:complement(2109219..2109221));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS10130;product=tRNA-Tyr NZ_CP075116.1 tRNAscan-SE exon 2109171 2109255 . - . ID=exon-CCO40_RS10130-1;Parent=rna-CCO40_RS10130;anticodon=(pos:complement(2109219..2109221));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS10130;product=tRNA-Tyr NZ_CP075116.1 RefSeq gene 2109290 2109421 . - . ID=gene-CCO40_RS10135;Name=CCO40_RS10135;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO40_RS10135;old_locus_tag=CCO40_10135 NZ_CP075116.1 cmsearch ncRNA 2109290 2109421 . - . ID=rna-CCO40_RS10135;Parent=gene-CCO40_RS10135;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00391,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS10135;product=RtT sRNA NZ_CP075116.1 cmsearch exon 2109290 2109421 . - . ID=exon-CCO40_RS10135-1;Parent=rna-CCO40_RS10135;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00391,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS10135;product=RtT sRNA NZ_CP075116.1 RefSeq gene 2109466 2109550 . - . ID=gene-CCO40_RS10140;Name=CCO40_RS10140;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS10140;old_locus_tag=CCO40_10140 NZ_CP075116.1 tRNAscan-SE tRNA 2109466 2109550 . - . ID=rna-CCO40_RS10140;Parent=gene-CCO40_RS10140;anticodon=(pos:complement(2109514..2109516));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS10140;product=tRNA-Tyr NZ_CP075116.1 tRNAscan-SE exon 2109466 2109550 . - . ID=exon-CCO40_RS10140-1;Parent=rna-CCO40_RS10140;anticodon=(pos:complement(2109514..2109516));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS10140;product=tRNA-Tyr NZ_CP075116.1 RefSeq gene 2109579 2109720 . - . ID=gene-CCO40_RS10145;Name=CCO40_RS10145;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO40_RS10145;old_locus_tag=CCO40_10145 NZ_CP075116.1 cmsearch ncRNA 2109579 2109720 . - . ID=rna-CCO40_RS10145;Parent=gene-CCO40_RS10145;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00391,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS10145;product=RtT sRNA NZ_CP075116.1 cmsearch exon 2109579 2109720 . - . ID=exon-CCO40_RS10145-1;Parent=rna-CCO40_RS10145;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00391,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS10145;product=RtT sRNA NZ_CP075116.1 RefSeq gene 2109891 2110733 . - . ID=gene-CCO40_RS10150;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=CCO40_RS10150;old_locus_tag=CCO40_10150 NZ_CP075116.1 Protein Homology CDS 2109891 2110733 . - 0 ID=cds-WP_001191156.1;Parent=gene-CCO40_RS10150;Dbxref=GenBank:WP_001191156.1;Name=WP_001191156.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460715.1;locus_tag=CCO40_RS10150;product=formyltetrahydrofolate deformylase;protein_id=WP_001191156.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2110784 2111242 . - . ID=gene-CCO40_RS10155;Name=CCO40_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10155;old_locus_tag=CCO40_10155 NZ_CP075116.1 Protein Homology CDS 2110784 2111242 . - 0 ID=cds-WP_094889314.1;Parent=gene-CCO40_RS10155;Dbxref=GenBank:WP_094889314.1;Name=WP_094889314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460714.1;locus_tag=CCO40_RS10155;product=YchJ family protein;protein_id=WP_094889314.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2111353 2112258 . + . ID=gene-CCO40_RS10160;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=CCO40_RS10160;old_locus_tag=CCO40_10160 NZ_CP075116.1 Protein Homology CDS 2111353 2112258 . + 0 ID=cds-WP_001230575.1;Parent=gene-CCO40_RS10160;Dbxref=GenBank:WP_001230575.1;Name=WP_001230575.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=phosphatidylcholine lysophospholipase A1 activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460713.1;locus_tag=CCO40_RS10160;product=patatin-like phospholipase RssA;protein_id=WP_001230575.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2112349 2113362 . + . ID=gene-CCO40_RS10165;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=CCO40_RS10165;old_locus_tag=CCO40_10165 NZ_CP075116.1 Protein Homology CDS 2112349 2113362 . + 0 ID=cds-WP_000193432.1;Parent=gene-CCO40_RS10165;Dbxref=GenBank:WP_000193432.1;Name=WP_000193432.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460712.1;locus_tag=CCO40_RS10165;product=two-component system response regulator RssB;protein_id=WP_000193432.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2113565 2114473 . + . ID=gene-CCO40_RS10170;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=CCO40_RS10170;old_locus_tag=CCO40_10170 NZ_CP075116.1 Protein Homology CDS 2113565 2114473 . + 0 ID=cds-WP_000729450.1;Parent=gene-CCO40_RS10170;Dbxref=GenBank:WP_000729450.1;Name=WP_000729450.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460711.1;locus_tag=CCO40_RS10170;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000729450.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2114607 2115020 . - . ID=gene-CCO40_RS10175;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=CCO40_RS10175;old_locus_tag=CCO40_10175 NZ_CP075116.1 Protein Homology CDS 2114607 2115020 . - 0 ID=cds-WP_001287383.1;Parent=gene-CCO40_RS10175;Dbxref=GenBank:WP_001287383.1;Name=WP_001287383.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460710.1;locus_tag=CCO40_RS10175;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_001287383.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2115683 2116300 . + . ID=gene-CCO40_RS10180;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=CCO40_RS10180;old_locus_tag=CCO40_10180 NZ_CP075116.1 Protein Homology CDS 2115683 2116300 . + 0 ID=cds-WP_000068097.1;Parent=gene-CCO40_RS10180;Dbxref=GenBank:WP_000068097.1;Name=WP_000068097.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460709.1;locus_tag=CCO40_RS10180;product=thymidine kinase;protein_id=WP_000068097.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2116497 2119175 . - . ID=gene-CCO40_RS10185;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=CCO40_RS10185;old_locus_tag=CCO40_10185 NZ_CP075116.1 Protein Homology CDS 2116497 2119175 . - 0 ID=cds-WP_000301679.1;Parent=gene-CCO40_RS10185;Dbxref=GenBank:WP_000301679.1;Name=WP_000301679.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=CCO40_RS10185;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_000301679.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2119652 2120299 . + . ID=gene-CCO40_RS10190;Name=CCO40_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10190;old_locus_tag=CCO40_10190 NZ_CP075116.1 Protein Homology CDS 2119652 2120299 . + 0 ID=cds-WP_000615840.1;Parent=gene-CCO40_RS10190;Dbxref=GenBank:WP_000615840.1;Name=WP_000615840.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460707.1;locus_tag=CCO40_RS10190;product=YchE family NAAT transporter;protein_id=WP_000615840.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2121076 2122707 . + . ID=gene-CCO40_RS10195;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=CCO40_RS10195;old_locus_tag=CCO40_10195 NZ_CP075116.1 Protein Homology CDS 2121076 2122707 . + 0 ID=cds-WP_061380500.1;Parent=gene-CCO40_RS10195;Dbxref=GenBank:WP_061380500.1;Name=WP_061380500.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001672805.1;locus_tag=CCO40_RS10195;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_061380500.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2122830 2123750 . + . ID=gene-CCO40_RS10200;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=CCO40_RS10200;old_locus_tag=CCO40_10200 NZ_CP075116.1 Protein Homology CDS 2122830 2123750 . + 0 ID=cds-WP_000911097.1;Parent=gene-CCO40_RS10200;Dbxref=GenBank:WP_000911097.1;Name=WP_000911097.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=CCO40_RS10200;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911097.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2123765 2124673 . + . ID=gene-CCO40_RS10205;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=CCO40_RS10205;old_locus_tag=CCO40_10205 NZ_CP075116.1 Protein Homology CDS 2123765 2124673 . + 0 ID=cds-WP_000979653.1;Parent=gene-CCO40_RS10205;Dbxref=GenBank:WP_000979653.1;Name=WP_000979653.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=CCO40_RS10205;product=oligopeptide ABC transporter permease OppC;protein_id=WP_000979653.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2124685 2125692 . + . ID=gene-CCO40_RS10210;Name=CCO40_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10210;old_locus_tag=CCO40_10210 NZ_CP075116.1 Protein Homology CDS 2124685 2125692 . + 0 ID=cds-WP_000058862.1;Parent=gene-CCO40_RS10210;Dbxref=GenBank:WP_000058862.1;Name=WP_000058862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460702.1;locus_tag=CCO40_RS10210;product=ABC transporter ATP-binding protein;protein_id=WP_000058862.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2125689 2126693 . + . ID=gene-CCO40_RS10215;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=CCO40_RS10215;old_locus_tag=CCO40_10215 NZ_CP075116.1 Protein Homology CDS 2125689 2126693 . + 0 ID=cds-WP_000994699.1;Parent=gene-CCO40_RS10215;Dbxref=GenBank:WP_000994699.1;Name=WP_000994699.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=CCO40_RS10215;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_000994699.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2126741 2127577 . + . ID=gene-CCO40_RS10220;Name=CCO40_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10220;old_locus_tag=CCO40_10220 NZ_CP075116.1 Protein Homology CDS 2126741 2127577 . + 0 ID=cds-WP_000059074.1;Parent=gene-CCO40_RS10220;Dbxref=GenBank:WP_000059074.1;Name=WP_000059074.1;Ontology_term=GO:0034220,GO:0005216,GO:0005267;gbkey=CDS;go_function=monoatomic ion channel activity|0005216||IEA,potassium channel activity|0005267||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460700.1;locus_tag=CCO40_RS10220;product=ion transporter;protein_id=WP_000059074.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2127625 2127954 . - . ID=gene-CCO40_RS10225;Name=CCO40_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10225;old_locus_tag=CCO40_10225 NZ_CP075116.1 Protein Homology CDS 2127625 2127954 . - 0 ID=cds-WP_000425070.1;Parent=gene-CCO40_RS10225;Dbxref=GenBank:WP_000425070.1;Name=WP_000425070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448158.1;locus_tag=CCO40_RS10225;product=HI1450 family dsDNA-mimic protein;protein_id=WP_000425070.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2127988 2129448 . - . ID=gene-CCO40_RS10230;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=CCO40_RS10230;old_locus_tag=CCO40_10230 NZ_CP075116.1 Protein Homology CDS 2127988 2129448 . - 0 ID=cds-WP_000206886.1;Parent=gene-CCO40_RS10230;Dbxref=GenBank:WP_000206886.1;Name=WP_000206886.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=CCO40_RS10230;product=cardiolipin synthase;protein_id=WP_000206886.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2129591 2129764 . + . ID=gene-CCO40_RS10235;Name=CCO40_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10235;old_locus_tag=CCO40_10235 NZ_CP075116.1 Protein Homology CDS 2129591 2129764 . + 0 ID=cds-WP_001531561.1;Parent=gene-CCO40_RS10235;Dbxref=GenBank:WP_001531561.1;Name=WP_001531561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=CCO40_RS10235;product=YciY family protein;protein_id=WP_001531561.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2129808 2130104 . - . ID=gene-CCO40_RS10240;Name=CCO40_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10240;old_locus_tag=CCO40_10240 NZ_CP075116.1 Protein Homology CDS 2129808 2130104 . - 0 ID=cds-WP_000967605.1;Parent=gene-CCO40_RS10240;Dbxref=GenBank:WP_000967605.1;Name=WP_000967605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460697.1;locus_tag=CCO40_RS10240;product=YciI family protein;protein_id=WP_000967605.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2130328 2131050 . + . ID=gene-CCO40_RS10245;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=CCO40_RS10245;old_locus_tag=CCO40_10245 NZ_CP075116.1 Protein Homology CDS 2130328 2131050 . + 0 ID=cds-WP_001531563.1;Parent=gene-CCO40_RS10245;Dbxref=GenBank:WP_001531563.1;Name=WP_001531563.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=CCO40_RS10245;product=TonB system transport protein TonB;protein_id=WP_001531563.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2131109 2131510 . - . ID=gene-CCO40_RS10250;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=CCO40_RS10250;old_locus_tag=CCO40_10250 NZ_CP075116.1 Protein Homology CDS 2131109 2131510 . - 0 ID=cds-WP_000210319.1;Parent=gene-CCO40_RS10250;Dbxref=GenBank:WP_000210319.1;Name=WP_000210319.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460695.1;locus_tag=CCO40_RS10250;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000210319.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2131671 2132210 . - . ID=gene-CCO40_RS10255;Name=CCO40_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10255;old_locus_tag=CCO40_10255 NZ_CP075116.1 Protein Homology CDS 2131671 2132210 . - 0 ID=cds-WP_000808682.1;Parent=gene-CCO40_RS10255;Dbxref=GenBank:WP_000808682.1;Name=WP_000808682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460694.1;locus_tag=CCO40_RS10255;product=septation protein A;protein_id=WP_000808682.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2132267 2133010 . - . ID=gene-CCO40_RS10260;Name=CCO40_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10260;old_locus_tag=CCO40_10260 NZ_CP075116.1 Protein Homology CDS 2132267 2133010 . - 0 ID=cds-WP_000028507.1;Parent=gene-CCO40_RS10260;Dbxref=GenBank:WP_000028507.1;Name=WP_000028507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=CCO40_RS10260;product=YciC family protein;protein_id=WP_000028507.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2133036 2133440 . - . ID=gene-CCO40_RS10265;Name=CCO40_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10265;old_locus_tag=CCO40_10265 NZ_CP075116.1 Protein Homology CDS 2133036 2133440 . - 0 ID=cds-WP_000114955.1;Parent=gene-CCO40_RS10265;Dbxref=GenBank:WP_000114955.1;Name=WP_000114955.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=CCO40_RS10265;product=YkgJ family cysteine cluster protein;protein_id=WP_000114955.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2133778 2134416 . + . ID=gene-CCO40_RS10270;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=CCO40_RS10270;old_locus_tag=CCO40_10270 NZ_CP075116.1 Protein Homology CDS 2133778 2134416 . + 0 ID=cds-WP_000714801.1;Parent=gene-CCO40_RS10270;Dbxref=GenBank:WP_000714801.1;Name=WP_000714801.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460691.1;locus_tag=CCO40_RS10270;product=outer membrane protein OmpW;protein_id=WP_000714801.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2134498 2135376 . - . ID=gene-CCO40_RS10275;Name=CCO40_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10275;old_locus_tag=CCO40_10275 NZ_CP075116.1 Protein Homology CDS 2134498 2135376 . - 0 ID=cds-WP_000488349.1;Parent=gene-CCO40_RS10275;Dbxref=GenBank:WP_000488349.1;Name=WP_000488349.1;Ontology_term=GO:0004096,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460690.1;locus_tag=CCO40_RS10275;product=manganese catalase family protein;protein_id=WP_000488349.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2135396 2135902 . - . ID=gene-CCO40_RS10280;Name=CCO40_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10280;old_locus_tag=CCO40_10280 NZ_CP075116.1 Protein Homology CDS 2135396 2135902 . - 0 ID=cds-WP_001109976.1;Parent=gene-CCO40_RS10280;Dbxref=GenBank:WP_001109976.1;Name=WP_001109976.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460689.1;locus_tag=CCO40_RS10280;product=ferritin-like domain-containing protein;protein_id=WP_001109976.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2135976 2136479 . - . ID=gene-CCO40_RS10285;Name=CCO40_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10285;old_locus_tag=CCO40_10285 NZ_CP075116.1 Protein Homology CDS 2135976 2136479 . - 0 ID=cds-WP_001022826.1;Parent=gene-CCO40_RS10285;Dbxref=GenBank:WP_001022826.1;Name=WP_001022826.1;Ontology_term=GO:0004322,GO:0005506,GO:0046872;gbkey=CDS;go_function=ferroxidase activity|0004322||IEA,iron ion binding|0005506||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460688.1;locus_tag=CCO40_RS10285;product=YciE/YciF ferroxidase family protein;protein_id=WP_001022826.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2136569 2136751 . - . ID=gene-CCO40_RS10290;Name=CCO40_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10290;old_locus_tag=CCO40_10290 NZ_CP075116.1 Protein Homology CDS 2136569 2136751 . - 0 ID=cds-WP_000807657.1;Parent=gene-CCO40_RS10290;Dbxref=GenBank:WP_000807657.1;Name=WP_000807657.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460687.1;locus_tag=CCO40_RS10290;product=con-10 family general stress protein;protein_id=WP_000807657.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2137230 2138036 . - . ID=gene-CCO40_RS10295;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=CCO40_RS10295;old_locus_tag=CCO40_10295 NZ_CP075116.1 Protein Homology CDS 2137230 2138036 . - 0 ID=cds-WP_000443029.1;Parent=gene-CCO40_RS10295;Dbxref=GenBank:WP_000443029.1;Name=WP_000443029.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460686.1;locus_tag=CCO40_RS10295;product=tryptophan synthase subunit alpha;protein_id=WP_000443029.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2138036 2139229 . - . ID=gene-CCO40_RS10300;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=CCO40_RS10300;old_locus_tag=CCO40_10300 NZ_CP075116.1 Protein Homology CDS 2138036 2139229 . - 0 ID=cds-WP_000209485.1;Parent=gene-CCO40_RS10300;Dbxref=GenBank:WP_000209485.1;Name=WP_000209485.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460685.1;locus_tag=CCO40_RS10300;product=tryptophan synthase subunit beta;protein_id=WP_000209485.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2139239 2140597 . - . ID=gene-CCO40_RS10305;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=CCO40_RS10305;old_locus_tag=CCO40_10305 NZ_CP075116.1 Protein Homology CDS 2139239 2140597 . - 0 ID=cds-WP_001195285.1;Parent=gene-CCO40_RS10305;Dbxref=GenBank:WP_001195285.1;Name=WP_001195285.1;Ontology_term=GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=CCO40_RS10305;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_001195285.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2140601 2142196 . - . ID=gene-CCO40_RS10310;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=CCO40_RS10310;old_locus_tag=CCO40_10310 NZ_CP075116.1 Protein Homology CDS 2140601 2142196 . - 0 ID=cds-WP_094889286.1;Parent=gene-CCO40_RS10310;Dbxref=GenBank:WP_094889286.1;Name=WP_094889286.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=CCO40_RS10310;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_094889286.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2142196 2143758 . - . ID=gene-CCO40_RS10315;Name=CCO40_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10315;old_locus_tag=CCO40_10315 NZ_CP075116.1 Protein Homology CDS 2142196 2143758 . - 0 ID=cds-WP_001194386.1;Parent=gene-CCO40_RS10315;Dbxref=GenBank:WP_001194386.1;Name=WP_001194386.1;Ontology_term=GO:0009058,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460682.1;locus_tag=CCO40_RS10315;product=anthranilate synthase component 1;protein_id=WP_001194386.1;transl_table=11 NZ_CP075116.1 cmsearch sequence_feature 2143781 2143876 . - . ID=id-NZ_CP075116.1:2143781..2143876;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00513,COORDINATES: profile:INFERNAL:1.1.5 NZ_CP075116.1 RefSeq gene 2143853 2143897 . - . ID=gene-CCO40_RS10320;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=CCO40_RS10320;old_locus_tag=CCO40_10320 NZ_CP075116.1 Protein Homology CDS 2143853 2143897 . - 0 ID=cds-WP_010989026.1;Parent=gene-CCO40_RS10320;Dbxref=GenBank:WP_010989026.1;Name=WP_010989026.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=CCO40_RS10320;product=trp operon leader peptide;protein_id=WP_010989026.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2144019 2144900 . + . ID=gene-CCO40_RS10325;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=CCO40_RS10325;old_locus_tag=CCO40_10325 NZ_CP075116.1 Protein Homology CDS 2144019 2144900 . + 0 ID=cds-WP_045717571.1;Parent=gene-CCO40_RS10325;Dbxref=GenBank:WP_045717571.1;Name=WP_045717571.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460680.1;locus_tag=CCO40_RS10325;product=RNase RNM;protein_id=WP_045717571.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2144908 2145528 . + . ID=gene-CCO40_RS10330;Name=CCO40_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10330;old_locus_tag=CCO40_10330 NZ_CP075116.1 Protein Homology CDS 2144908 2145528 . + 0 ID=cds-WP_000077250.1;Parent=gene-CCO40_RS10330;Dbxref=GenBank:WP_000077250.1;Name=WP_000077250.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase activity|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=CCO40_RS10330;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_000077250.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2145629 2146504 . + . ID=gene-CCO40_RS10335;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=CCO40_RS10335;old_locus_tag=CCO40_10335 NZ_CP075116.1 Protein Homology CDS 2145629 2146504 . + 0 ID=cds-WP_001291233.1;Parent=gene-CCO40_RS10335;Dbxref=GenBank:WP_001291233.1;Name=WP_001291233.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=CCO40_RS10335;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001291233.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2146591 2147181 . - . ID=gene-CCO40_RS10340;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=CCO40_RS10340;old_locus_tag=CCO40_10340 NZ_CP075116.1 Protein Homology CDS 2146591 2147181 . - 0 ID=cds-WP_001278865.1;Parent=gene-CCO40_RS10340;Dbxref=GenBank:WP_001278865.1;Name=WP_001278865.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460677.1;locus_tag=CCO40_RS10340;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_001278865.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2147178 2147939 . - . ID=gene-CCO40_RS10345;Name=CCO40_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10345;old_locus_tag=CCO40_10345 NZ_CP075116.1 Protein Homology CDS 2147178 2147939 . - 0 ID=cds-WP_000559310.1;Parent=gene-CCO40_RS10345;Dbxref=GenBank:WP_000559310.1;Name=WP_000559310.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460676.1;locus_tag=CCO40_RS10345;product=YciK family oxidoreductase;protein_id=WP_000559310.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2148177 2149223 . + . ID=gene-CCO40_RS10350;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=CCO40_RS10350;old_locus_tag=CCO40_10350 NZ_CP075116.1 Protein Homology CDS 2148177 2149223 . + 0 ID=cds-WP_000422082.1;Parent=gene-CCO40_RS10350;Dbxref=GenBank:WP_000422082.1;Name=WP_000422082.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460675.1;locus_tag=CCO40_RS10350;product=protease SohB;protein_id=WP_000422082.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2149265 2149516 . - . ID=gene-CCO40_RS10355;Name=CCO40_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10355;old_locus_tag=CCO40_10355 NZ_CP075116.1 Protein Homology CDS 2149265 2149516 . - 0 ID=cds-WP_000548616.1;Parent=gene-CCO40_RS10355;Dbxref=GenBank:WP_000548616.1;Name=WP_000548616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460674.1;locus_tag=CCO40_RS10355;product=YciN family protein;protein_id=WP_000548616.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2149919 2152516 . + . ID=gene-CCO40_RS10360;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=CCO40_RS10360;old_locus_tag=CCO40_10360 NZ_CP075116.1 Protein Homology CDS 2149919 2152516 . + 0 ID=cds-WP_000513593.1;Parent=gene-CCO40_RS10360;Dbxref=GenBank:WP_000513593.1;Name=WP_000513593.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=CCO40_RS10360;product=type I DNA topoisomerase;protein_id=WP_000513593.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2152927 2153901 . + . ID=gene-CCO40_RS10365;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=CCO40_RS10365;old_locus_tag=CCO40_10365 NZ_CP075116.1 Protein Homology CDS 2152927 2153901 . + 0 ID=cds-WP_000776233.1;Parent=gene-CCO40_RS10365;Dbxref=GenBank:WP_000776233.1;Name=WP_000776233.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=CCO40_RS10365;product=HTH-type transcriptional regulator CysB;protein_id=WP_000776233.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2154182 2154322 . + . ID=gene-CCO40_RS10370;Name=CCO40_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10370;old_locus_tag=CCO40_10370 NZ_CP075116.1 Protein Homology CDS 2154182 2154322 . + 0 ID=cds-WP_213083417.1;Parent=gene-CCO40_RS10370;Dbxref=GenBank:WP_213083417.1;Name=WP_213083417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=CCO40_RS10370;product=YmiA family putative membrane protein;protein_id=WP_213083417.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2154323 2154493 . + . ID=gene-CCO40_RS10375;Name=CCO40_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10375;old_locus_tag=CCO40_10375 NZ_CP075116.1 Protein Homology CDS 2154323 2154493 . + 0 ID=cds-WP_000029027.1;Parent=gene-CCO40_RS10375;Dbxref=GenBank:WP_000029027.1;Name=WP_000029027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000029022.1;locus_tag=CCO40_RS10375;product=YciX family protein;protein_id=WP_000029027.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2154603 2154695 . + . ID=gene-CCO40_RS22475;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=CCO40_RS22475 NZ_CP075116.1 Protein Homology CDS 2154603 2154695 . + 0 ID=cds-WP_223148964.1;Parent=gene-CCO40_RS22475;Dbxref=GenBank:WP_223148964.1;Name=WP_223148964.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_226998799.1;locus_tag=CCO40_RS22475;product=small membrane protein YmiC;protein_id=WP_223148964.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2154878 2157553 . + . ID=gene-CCO40_RS10380;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=CCO40_RS10380;old_locus_tag=CCO40_10380 NZ_CP075116.1 Protein Homology CDS 2154878 2157553 . + 0 ID=cds-WP_000099475.1;Parent=gene-CCO40_RS10380;Dbxref=GenBank:WP_000099475.1;Name=WP_000099475.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=CCO40_RS10380;product=aconitate hydratase AcnA;protein_id=WP_000099475.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2157609 2158199 . - . ID=gene-CCO40_RS10385;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=CCO40_RS10385;old_locus_tag=CCO40_10385 NZ_CP075116.1 Protein Homology CDS 2157609 2158199 . - 0 ID=cds-WP_001176284.1;Parent=gene-CCO40_RS10385;Dbxref=GenBank:WP_001176284.1;Name=WP_001176284.1;Ontology_term=GO:0009231,GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460670.1;locus_tag=CCO40_RS10385;product=GTP cyclohydrolase II;protein_id=WP_001176284.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2158395 2159159 . + . ID=gene-CCO40_RS10390;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=CCO40_RS10390;old_locus_tag=CCO40_10390 NZ_CP075116.1 Protein Homology CDS 2158395 2159159 . + 0 ID=cds-WP_000948651.1;Parent=gene-CCO40_RS10390;Dbxref=GenBank:WP_000948651.1;Name=WP_000948651.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460669.1;locus_tag=CCO40_RS10390;product=phosphatidylglycerophosphatase B;protein_id=WP_000948651.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2159309 2159617 . + . ID=gene-CCO40_RS10395;Name=CCO40_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10395;old_locus_tag=CCO40_10395 NZ_CP075116.1 Protein Homology CDS 2159309 2159617 . + 0 ID=cds-WP_000876301.1;Parent=gene-CCO40_RS10395;Dbxref=GenBank:WP_000876301.1;Name=WP_000876301.1;Ontology_term=GO:0008653,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460668.1;locus_tag=CCO40_RS10395;product=LapA family protein;protein_id=WP_000876301.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2159624 2160793 . + . ID=gene-CCO40_RS10400;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=CCO40_RS10400;old_locus_tag=CCO40_10400 NZ_CP075116.1 Protein Homology CDS 2159624 2160793 . + 0 ID=cds-WP_000891383.1;Parent=gene-CCO40_RS10400;Dbxref=GenBank:WP_000891383.1;Name=WP_000891383.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=CCO40_RS10400;product=lipopolysaccharide assembly protein LapB;protein_id=WP_000891383.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2160984 2161721 . + . ID=gene-CCO40_RS10405;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=CCO40_RS10405;old_locus_tag=CCO40_10405 NZ_CP075116.1 Protein Homology CDS 2160984 2161721 . + 0 ID=cds-WP_001669189.1;Parent=gene-CCO40_RS10405;Dbxref=GenBank:WP_001669189.1;Name=WP_001669189.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460666.1;locus_tag=CCO40_RS10405;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_001669189.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2161721 2162047 . + . ID=gene-CCO40_RS10410;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=CCO40_RS10410;old_locus_tag=CCO40_10410 NZ_CP075116.1 Protein Homology CDS 2161721 2162047 . + 0 ID=cds-WP_001285199.1;Parent=gene-CCO40_RS10410;Dbxref=GenBank:WP_001285199.1;Name=WP_001285199.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460665.1;locus_tag=CCO40_RS10410;product=stress response translation initiation inhibitor YciH;protein_id=WP_001285199.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2162167 2162385 . - . ID=gene-CCO40_RS10415;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=CCO40_RS10415;old_locus_tag=CCO40_10415 NZ_CP075116.1 Protein Homology CDS 2162167 2162385 . - 0 ID=cds-WP_000481166.1;Parent=gene-CCO40_RS10415;Dbxref=GenBank:WP_000481166.1;Name=WP_000481166.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=CCO40_RS10415;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_000481166.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2162644 2163396 . - . ID=gene-CCO40_RS10420;Name=yciT;gbkey=Gene;gene=yciT;gene_biotype=protein_coding;gene_synonym=deoT;locus_tag=CCO40_RS10420;old_locus_tag=CCO40_10420 NZ_CP075116.1 Protein Homology CDS 2162644 2163396 . - 0 ID=cds-WP_001088593.1;Parent=gene-CCO40_RS10420;Dbxref=GenBank:WP_001088593.1;Name=WP_001088593.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yciT;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460663.1;locus_tag=CCO40_RS10420;product=DNA-binding transcriptional regulator YciT;protein_id=WP_001088593.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2163483 2163662 . - . ID=gene-CCO40_RS10425;Name=CCO40_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10425;old_locus_tag=CCO40_10425 NZ_CP075116.1 Protein Homology CDS 2163483 2163662 . - 0 ID=cds-WP_001279854.1;Parent=gene-CCO40_RS10425;Dbxref=GenBank:WP_001279854.1;Name=WP_001279854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=CCO40_RS10425;product=YciZ family protein;protein_id=WP_001279854.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2163784 2165766 . - . ID=gene-CCO40_RS10430;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=CCO40_RS10430;old_locus_tag=CCO40_10430 NZ_CP075116.1 Protein Homology CDS 2163784 2165766 . - 0 ID=cds-WP_001675620.1;Parent=gene-CCO40_RS10430;Dbxref=GenBank:WP_001675620.1;Name=WP_001675620.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=CCO40_RS10430;product=cyclic di-GMP phosphodiesterase;protein_id=WP_001675620.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2166028 2167962 . - . ID=gene-CCO40_RS10435;Name=CCO40_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10435;old_locus_tag=CCO40_10435 NZ_CP075116.1 Protein Homology CDS 2166028 2167962 . - 0 ID=cds-WP_000485050.1;Parent=gene-CCO40_RS10435;Dbxref=GenBank:WP_000485050.1;Name=WP_000485050.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=CCO40_RS10435;product=exoribonuclease II;protein_id=WP_000485050.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 2168207 2169184 . - . ID=gene-CCO40_RS10440;Name=CCO40_RS10440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS10440;old_locus_tag=CCO40_10440;partial=true;pseudo=true;start_range=.,2168207 NZ_CP075116.1 Protein Homology CDS 2168207 2169184 . - 0 ID=cds-CCO40_RS10440;Parent=gene-CCO40_RS10440;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460660.1;locus_tag=CCO40_RS10440;partial=true;product=carboxymuconolactone decarboxylase family protein;pseudo=true;start_range=.,2168207;transl_table=11 NZ_CP075116.1 RefSeq gene 2169384 2170172 . - . ID=gene-CCO40_RS10445;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=CCO40_RS10445;old_locus_tag=CCO40_10445 NZ_CP075116.1 Protein Homology CDS 2169384 2170172 . - 0 ID=cds-WP_000506501.1;Parent=gene-CCO40_RS10445;Dbxref=GenBank:WP_000506501.1;Name=WP_000506501.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=CCO40_RS10445;product=enoyl-ACP reductase FabI;protein_id=WP_000506501.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 2170290 2170588 . - . ID=gene-CCO40_RS22480;Name=CCO40_RS22480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22480;pseudo=true NZ_CP075116.1 Protein Homology CDS 2170290 2170588 . - 0 ID=cds-CCO40_RS22480;Parent=gene-CCO40_RS22480;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=CCO40_RS22480;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 2170563 2170742 . - . ID=gene-CCO40_RS10450;Name=CCO40_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10450;old_locus_tag=CCO40_10450 NZ_CP075116.1 Protein Homology CDS 2170563 2170742 . - 0 ID=cds-WP_015675550.1;Parent=gene-CCO40_RS10450;Dbxref=GenBank:WP_015675550.1;Name=WP_015675550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460657.1;locus_tag=CCO40_RS10450;product=hypothetical protein;protein_id=WP_015675550.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2170777 2172150 . + . ID=gene-CCO40_RS10455;Name=steC;gbkey=Gene;gene=steC;gene_biotype=protein_coding;locus_tag=CCO40_RS10455;old_locus_tag=CCO40_10455 NZ_CP075116.1 Protein Homology CDS 2170777 2172150 . + 0 ID=cds-WP_001116909.1;Parent=gene-CCO40_RS10455;Dbxref=GenBank:WP_001116909.1;Name=WP_001116909.1;gbkey=CDS;gene=steC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460656.1;locus_tag=CCO40_RS10455;product=SPI-2 type III secretion system effector kinase SteC;protein_id=WP_001116909.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2172617 2173324 . + . ID=gene-CCO40_RS10460;Name=CCO40_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10460;old_locus_tag=CCO40_10460 NZ_CP075116.1 Protein Homology CDS 2172617 2173324 . + 0 ID=cds-WP_001268395.1;Parent=gene-CCO40_RS10460;Dbxref=GenBank:WP_001268395.1;Name=WP_001268395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748430.1;locus_tag=CCO40_RS10460;product=EAL domain-containing protein;protein_id=WP_001268395.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2173340 2174146 . - . ID=gene-CCO40_RS10465;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=CCO40_RS10465;old_locus_tag=CCO40_10465 NZ_CP075116.1 Protein Homology CDS 2173340 2174146 . - 0 ID=cds-WP_000230462.1;Parent=gene-CCO40_RS10465;Dbxref=GenBank:WP_000230462.1;Name=WP_000230462.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=CCO40_RS10465;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_000230462.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2174148 2175140 . - . ID=gene-CCO40_RS10470;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=CCO40_RS10470;old_locus_tag=CCO40_10470 NZ_CP075116.1 Protein Homology CDS 2174148 2175140 . - 0 ID=cds-WP_001128869.1;Parent=gene-CCO40_RS10470;Dbxref=GenBank:WP_001128869.1;Name=WP_001128869.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460653.1;locus_tag=CCO40_RS10470;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_001128869.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2175140 2176030 . - . ID=gene-CCO40_RS10475;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=CCO40_RS10475;old_locus_tag=CCO40_10475 NZ_CP075116.1 Protein Homology CDS 2175140 2176030 . - 0 ID=cds-WP_001146150.1;Parent=gene-CCO40_RS10475;Dbxref=GenBank:WP_001146150.1;Name=WP_001146150.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460652.1;locus_tag=CCO40_RS10475;product=peptide ABC transporter permease SapC;protein_id=WP_001146150.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2176017 2176982 . - . ID=gene-CCO40_RS10480;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=CCO40_RS10480;old_locus_tag=CCO40_10480 NZ_CP075116.1 Protein Homology CDS 2176017 2176982 . - 0 ID=cds-WP_000583298.1;Parent=gene-CCO40_RS10480;Dbxref=GenBank:WP_000583298.1;Name=WP_000583298.1;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=CCO40_RS10480;product=peptide ABC transporter permease SapB;protein_id=WP_000583298.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2176979 2178628 . - . ID=gene-CCO40_RS10485;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=CCO40_RS10485;old_locus_tag=CCO40_10485 NZ_CP075116.1 Protein Homology CDS 2176979 2178628 . - 0 ID=cds-WP_001241631.1;Parent=gene-CCO40_RS10485;Dbxref=GenBank:WP_001241631.1;Name=WP_001241631.1;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=CCO40_RS10485;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WP_001241631.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2178740 2179720 . - . ID=gene-CCO40_RS10490;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=CCO40_RS10490;old_locus_tag=CCO40_10490 NZ_CP075116.1 Protein Homology CDS 2178740 2179720 . - 0 ID=cds-WP_001531574.1;Parent=gene-CCO40_RS10490;Dbxref=GenBank:WP_001531574.1;Name=WP_001531574.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460649.1;locus_tag=CCO40_RS10490;product=phage shock protein operon transcriptional activator;protein_id=WP_001531574.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2179891 2180559 . + . ID=gene-CCO40_RS10495;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=CCO40_RS10495;old_locus_tag=CCO40_10495 NZ_CP075116.1 Protein Homology CDS 2179891 2180559 . + 0 ID=cds-WP_000511010.1;Parent=gene-CCO40_RS10495;Dbxref=GenBank:WP_000511010.1;Name=WP_000511010.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460648.1;locus_tag=CCO40_RS10495;product=phage shock protein PspA;protein_id=WP_000511010.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2180619 2180843 . + . ID=gene-CCO40_RS10500;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=CCO40_RS10500;old_locus_tag=CCO40_10500 NZ_CP075116.1 Protein Homology CDS 2180619 2180843 . + 0 ID=cds-WP_001274953.1;Parent=gene-CCO40_RS10500;Dbxref=GenBank:WP_001274953.1;Name=WP_001274953.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460647.1;locus_tag=CCO40_RS10500;product=envelope stress response membrane protein PspB;protein_id=WP_001274953.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2180843 2181202 . + . ID=gene-CCO40_RS10505;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=CCO40_RS10505;old_locus_tag=CCO40_10505 NZ_CP075116.1 Protein Homology CDS 2180843 2181202 . + 0 ID=cds-WP_000508938.1;Parent=gene-CCO40_RS10505;Dbxref=GenBank:WP_000508938.1;Name=WP_000508938.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460646.1;locus_tag=CCO40_RS10505;product=envelope stress response membrane protein PspC;protein_id=WP_000508938.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2181225 2181443 . + . ID=gene-CCO40_RS10510;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=CCO40_RS10510;old_locus_tag=CCO40_10510 NZ_CP075116.1 Protein Homology CDS 2181225 2181443 . + 0 ID=cds-WP_001097607.1;Parent=gene-CCO40_RS10510;Dbxref=GenBank:WP_001097607.1;Name=WP_001097607.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460645.1;locus_tag=CCO40_RS10510;product=phage shock protein PspD;protein_id=WP_001097607.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2181519 2181833 . + . ID=gene-CCO40_RS10515;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=CCO40_RS10515;old_locus_tag=CCO40_10515 NZ_CP075116.1 Protein Homology CDS 2181519 2181833 . + 0 ID=cds-WP_000913432.1;Parent=gene-CCO40_RS10515;Dbxref=GenBank:WP_000913432.1;Name=WP_000913432.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460644.1;locus_tag=CCO40_RS10515;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000913432.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2181982 2183379 . + . ID=gene-CCO40_RS10520;Name=CCO40_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10520;old_locus_tag=CCO40_10520 NZ_CP075116.1 Protein Homology CDS 2181982 2183379 . + 0 ID=cds-WP_170930895.1;Parent=gene-CCO40_RS10520;Dbxref=GenBank:WP_170930895.1;Name=WP_170930895.1;Ontology_term=GO:0003924,GO:0005525,GO:0019003;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,GDP binding|0019003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=CCO40_RS10520;product=YcjX family GTP-binding protein;protein_id=WP_170930895.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2183376 2184437 . + . ID=gene-CCO40_RS10525;Name=CCO40_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10525;old_locus_tag=CCO40_10525 NZ_CP075116.1 Protein Homology CDS 2183376 2184437 . + 0 ID=cds-WP_001294479.1;Parent=gene-CCO40_RS10525;Dbxref=GenBank:WP_001294479.1;Name=WP_001294479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=CCO40_RS10525;product=TIGR01620 family protein;protein_id=WP_001294479.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2184585 2186126 . + . ID=gene-CCO40_RS10530;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=CCO40_RS10530;old_locus_tag=CCO40_10530 NZ_CP075116.1 Protein Homology CDS 2184585 2186126 . + 0 ID=cds-WP_001235493.1;Parent=gene-CCO40_RS10530;Dbxref=GenBank:WP_001235493.1;Name=WP_001235493.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460641.1;locus_tag=CCO40_RS10530;product=transcriptional regulator TyrR;protein_id=WP_001235493.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2186216 2186722 . - . ID=gene-CCO40_RS10535;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=CCO40_RS10535;old_locus_tag=CCO40_10535 NZ_CP075116.1 Protein Homology CDS 2186216 2186722 . - 0 ID=cds-WP_000084401.1;Parent=gene-CCO40_RS10535;Dbxref=GenBank:WP_000084401.1;Name=WP_000084401.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460640.1;locus_tag=CCO40_RS10535;product=thiol peroxidase;protein_id=WP_000084401.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2186838 2187803 . + . ID=gene-CCO40_RS10540;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=CCO40_RS10540;old_locus_tag=CCO40_10540 NZ_CP075116.1 Protein Homology CDS 2186838 2187803 . + 0 ID=cds-WP_021000382.1;Parent=gene-CCO40_RS10540;Dbxref=GenBank:WP_021000382.1;Name=WP_021000382.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460639.1;locus_tag=CCO40_RS10540;product=L-Ala-D/L-Glu epimerase;protein_id=WP_021000382.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2187778 2188506 . - . ID=gene-CCO40_RS10545;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=CCO40_RS10545;old_locus_tag=CCO40_10545 NZ_CP075116.1 Protein Homology CDS 2187778 2188506 . - 0 ID=cds-WP_000219108.1;Parent=gene-CCO40_RS10545;Dbxref=GenBank:WP_000219108.1;Name=WP_000219108.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460638.1;locus_tag=CCO40_RS10545;product=murein tripeptide amidase MpaA;protein_id=WP_000219108.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2188696 2190309 . + . ID=gene-CCO40_RS10550;Name=CCO40_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10550;old_locus_tag=CCO40_10550 NZ_CP075116.1 Protein Homology CDS 2188696 2190309 . + 0 ID=cds-WP_001216563.1;Parent=gene-CCO40_RS10550;Dbxref=GenBank:WP_001216563.1;Name=WP_001216563.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460637.1;locus_tag=CCO40_RS10550;product=peptide ABC transporter substrate-binding protein;protein_id=WP_001216563.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2190406 2191335 . - . ID=gene-CCO40_RS10555;Name=CCO40_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10555;old_locus_tag=CCO40_10555 NZ_CP075116.1 Protein Homology CDS 2190406 2191335 . - 0 ID=cds-WP_023237702.1;Parent=gene-CCO40_RS10555;Dbxref=GenBank:WP_023237702.1;Name=WP_023237702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460636.1;locus_tag=CCO40_RS10555;product=aromatic alcohol reductase;protein_id=WP_023237702.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2191454 2192359 . + . ID=gene-CCO40_RS10560;Name=CCO40_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10560;old_locus_tag=CCO40_10560 NZ_CP075116.1 Protein Homology CDS 2191454 2192359 . + 0 ID=cds-WP_094889284.1;Parent=gene-CCO40_RS10560;Dbxref=GenBank:WP_094889284.1;Name=WP_094889284.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460635.1;locus_tag=CCO40_RS10560;product=LysR family transcriptional regulator;protein_id=WP_094889284.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2192636 2193505 . + . ID=gene-CCO40_RS10565;Name=CCO40_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10565;old_locus_tag=CCO40_10565 NZ_CP075116.1 Protein Homology CDS 2192636 2193505 . + 0 ID=cds-WP_023206477.1;Parent=gene-CCO40_RS10565;Dbxref=GenBank:WP_023206477.1;Name=WP_023206477.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460634.1;locus_tag=CCO40_RS10565;product=aldo/keto reductase;protein_id=WP_023206477.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2193596 2194309 . - . ID=gene-CCO40_RS10570;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=CCO40_RS10570;old_locus_tag=CCO40_10570 NZ_CP075116.1 Protein Homology CDS 2193596 2194309 . - 0 ID=cds-WP_094889283.1;Parent=gene-CCO40_RS10570;Dbxref=GenBank:WP_094889283.1;Name=WP_094889283.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460633.1;locus_tag=CCO40_RS10570;product=SDR family oxidoreductase;protein_id=WP_094889283.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2194387 2194977 . + . ID=gene-CCO40_RS10575;Name=CCO40_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10575;old_locus_tag=CCO40_10575 NZ_CP075116.1 Protein Homology CDS 2194387 2194977 . + 0 ID=cds-WP_000208474.1;Parent=gene-CCO40_RS10575;Dbxref=GenBank:WP_000208474.1;Name=WP_000208474.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460632.1;locus_tag=CCO40_RS10575;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000208474.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2195106 2195342 . + . ID=gene-CCO40_RS10580;Name=CCO40_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10580;old_locus_tag=CCO40_10580 NZ_CP075116.1 Protein Homology CDS 2195106 2195342 . + 0 ID=cds-WP_001168016.1;Parent=gene-CCO40_RS10580;Dbxref=GenBank:WP_001168016.1;Name=WP_001168016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168019.1;locus_tag=CCO40_RS10580;product=YgdI/YgdR family lipoprotein;protein_id=WP_001168016.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2195556 2196665 . - . ID=gene-CCO40_RS10585;Name=CCO40_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10585;old_locus_tag=CCO40_10585 NZ_CP075116.1 Protein Homology CDS 2195556 2196665 . - 0 ID=cds-WP_094889282.1;Parent=gene-CCO40_RS10585;Dbxref=GenBank:WP_094889282.1;Name=WP_094889282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=CCO40_RS10585;product=hypothetical protein;protein_id=WP_094889282.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2197058 2197915 . - . ID=gene-CCO40_RS10590;Name=CCO40_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10590;old_locus_tag=CCO40_10590 NZ_CP075116.1 Protein Homology CDS 2197058 2197915 . - 0 ID=cds-WP_094889281.1;Parent=gene-CCO40_RS10590;Dbxref=GenBank:WP_094889281.1;Name=WP_094889281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=CCO40_RS10590;product=GyrI-like domain-containing protein;protein_id=WP_094889281.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2198209 2199054 . + . ID=gene-CCO40_RS10595;Name=zirU;gbkey=Gene;gene=zirU;gene_biotype=protein_coding;locus_tag=CCO40_RS10595;old_locus_tag=CCO40_10595 NZ_CP075116.1 Protein Homology CDS 2198209 2199054 . + 0 ID=cds-WP_094889280.1;Parent=gene-CCO40_RS10595;Dbxref=GenBank:WP_094889280.1;Name=WP_094889280.1;gbkey=CDS;gene=zirU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460628.1;locus_tag=CCO40_RS10595;product=two-partner-like secretion system exoprotein ZirU;protein_id=WP_094889280.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2199129 2201111 . + . ID=gene-CCO40_RS10600;Name=zirT;gbkey=Gene;gene=zirT;gene_biotype=protein_coding;locus_tag=CCO40_RS10600;old_locus_tag=CCO40_10600 NZ_CP075116.1 Protein Homology CDS 2199129 2201111 . + 0 ID=cds-WP_094889279.1;Parent=gene-CCO40_RS10600;Dbxref=GenBank:WP_094889279.1;Name=WP_094889279.1;gbkey=CDS;gene=zirT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=CCO40_RS10600;product=two-partner secretion translocator ZirT;protein_id=WP_094889279.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2201132 2201962 . + . ID=gene-CCO40_RS10605;Name=zirS;gbkey=Gene;gene=zirS;gene_biotype=protein_coding;locus_tag=CCO40_RS10605;old_locus_tag=CCO40_10605 NZ_CP075116.1 Protein Homology CDS 2201132 2201962 . + 0 ID=cds-WP_077929572.1;Parent=gene-CCO40_RS10605;Dbxref=GenBank:WP_077929572.1;Name=WP_077929572.1;gbkey=CDS;gene=zirS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460626.1;locus_tag=CCO40_RS10605;product=two-partner-like secretion system exoprotein ZirS;protein_id=WP_077929572.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2202061 2202618 . + . ID=gene-CCO40_RS10610;Name=CCO40_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10610;old_locus_tag=CCO40_10610 NZ_CP075116.1 Protein Homology CDS 2202061 2202618 . + 0 ID=cds-WP_077929573.1;Parent=gene-CCO40_RS10610;Dbxref=GenBank:WP_077929573.1;Name=WP_077929573.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460625.1;locus_tag=CCO40_RS10610;product=redoxin family protein;protein_id=WP_077929573.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2202724 2203062 . - . ID=gene-CCO40_RS10615;Name=CCO40_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10615;old_locus_tag=CCO40_10615 NZ_CP075116.1 Protein Homology CDS 2202724 2203062 . - 0 ID=cds-WP_020839318.1;Parent=gene-CCO40_RS10615;Dbxref=GenBank:WP_020839318.1;Name=WP_020839318.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051808.1;locus_tag=CCO40_RS10615;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_020839318.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2203090 2203776 . - . ID=gene-CCO40_RS10620;Name=CCO40_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10620;old_locus_tag=CCO40_10620 NZ_CP075116.1 Protein Homology CDS 2203090 2203776 . - 0 ID=cds-WP_017441303.1;Parent=gene-CCO40_RS10620;Dbxref=GenBank:WP_017441303.1;Name=WP_017441303.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460624.1;locus_tag=CCO40_RS10620;product=B3/B4 domain-containing protein;protein_id=WP_017441303.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2203820 2204422 . + . ID=gene-CCO40_RS10625;Name=CCO40_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10625;old_locus_tag=CCO40_10625 NZ_CP075116.1 Protein Homology CDS 2203820 2204422 . + 0 ID=cds-WP_000163370.1;Parent=gene-CCO40_RS10625;Dbxref=GenBank:WP_000163370.1;Name=WP_000163370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460623.1;locus_tag=CCO40_RS10625;product=helix-turn-helix domain-containing protein;protein_id=WP_000163370.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2204508 2205539 . - . ID=gene-CCO40_RS10630;Name=CCO40_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10630;old_locus_tag=CCO40_10630 NZ_CP075116.1 Protein Homology CDS 2204508 2205539 . - 0 ID=cds-WP_000493670.1;Parent=gene-CCO40_RS10630;Dbxref=GenBank:WP_000493670.1;Name=WP_000493670.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460622.1;locus_tag=CCO40_RS10630;product=mechanosensitive ion channel family protein;protein_id=WP_000493670.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2205778 2206032 . + . ID=gene-CCO40_RS10635;Name=CCO40_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10635;old_locus_tag=CCO40_10635 NZ_CP075116.1 Protein Homology CDS 2205778 2206032 . + 0 ID=cds-WP_000605645.1;Parent=gene-CCO40_RS10635;Dbxref=GenBank:WP_000605645.1;Name=WP_000605645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460621.1;locus_tag=CCO40_RS10635;product=DUF2534 family protein;protein_id=WP_000605645.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2206087 2207034 . - . ID=gene-CCO40_RS10640;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=CCO40_RS10640;old_locus_tag=CCO40_10640 NZ_CP075116.1 Protein Homology CDS 2206087 2207034 . - 0 ID=cds-WP_001262138.1;Parent=gene-CCO40_RS10640;Dbxref=GenBank:WP_001262138.1;Name=WP_001262138.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460620.1;locus_tag=CCO40_RS10640;product=universal stress protein UspE;protein_id=WP_001262138.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2207185 2207937 . - . ID=gene-CCO40_RS10645;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=CCO40_RS10645;old_locus_tag=CCO40_10645 NZ_CP075116.1 Protein Homology CDS 2207185 2207937 . - 0 ID=cds-WP_000611914.1;Parent=gene-CCO40_RS10645;Dbxref=GenBank:WP_000611914.1;Name=WP_000611914.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=CCO40_RS10645;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611914.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2208133 2208648 . - . ID=gene-CCO40_RS10650;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=CCO40_RS10650;old_locus_tag=CCO40_10650 NZ_CP075116.1 Protein Homology CDS 2208133 2208648 . - 0 ID=cds-WP_000945036.1;Parent=gene-CCO40_RS10650;Dbxref=GenBank:WP_000945036.1;Name=WP_000945036.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460618.1;locus_tag=CCO40_RS10650;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945036.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2208906 2209469 . + . ID=gene-CCO40_RS10655;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=CCO40_RS10655;old_locus_tag=CCO40_10655 NZ_CP075116.1 Protein Homology CDS 2208906 2209469 . + 0 ID=cds-WP_001046799.1;Parent=gene-CCO40_RS10655;Dbxref=GenBank:WP_001046799.1;Name=WP_001046799.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=CCO40_RS10655;product=DNA endonuclease SmrA;protein_id=WP_001046799.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2209880 2211034 . + . ID=gene-CCO40_RS10660;Name=CCO40_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10660;old_locus_tag=CCO40_10660 NZ_CP075116.1 Protein Homology CDS 2209880 2211034 . + 0 ID=cds-WP_000945630.1;Parent=gene-CCO40_RS10660;Dbxref=GenBank:WP_000945630.1;Name=WP_000945630.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460616.1;locus_tag=CCO40_RS10660;product=methyl-accepting chemotaxis protein;protein_id=WP_000945630.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2211180 2212163 . + . ID=gene-CCO40_RS10665;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=CCO40_RS10665;old_locus_tag=CCO40_10665 NZ_CP075116.1 Protein Homology CDS 2211180 2212163 . + 0 ID=cds-WP_000387374.1;Parent=gene-CCO40_RS10665;Dbxref=GenBank:WP_000387374.1;Name=WP_000387374.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=CCO40_RS10665;product=zinc transporter ZntB;protein_id=WP_000387374.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2212439 2212621 . + . ID=gene-CCO40_RS22775;Name=ynaL;gbkey=Gene;gene=ynaL;gene_biotype=protein_coding;locus_tag=CCO40_RS22775 NZ_CP075116.1 Protein Homology CDS 2212439 2212621 . + 0 ID=cds-WP_001670836.1;Parent=gene-CCO40_RS22775;Dbxref=GenBank:WP_001670836.1;Name=WP_001670836.1;gbkey=CDS;gene=ynaL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_271267465.1;locus_tag=CCO40_RS22775;product=proline-rich small protein YnaL;protein_id=WP_001670836.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2212650 2214023 . + . ID=gene-CCO40_RS10670;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=CCO40_RS10670;old_locus_tag=CCO40_10670 NZ_CP075116.1 Protein Homology CDS 2212650 2214023 . + 0 ID=cds-WP_000123685.1;Parent=gene-CCO40_RS10670;Dbxref=GenBank:WP_000123685.1;Name=WP_000123685.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=CCO40_RS10670;product=ATP-dependent RNA helicase DbpA;protein_id=WP_000123685.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2214067 2215002 . - . ID=gene-CCO40_RS10675;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=CCO40_RS10675;old_locus_tag=CCO40_10675 NZ_CP075116.1 Protein Homology CDS 2214067 2215002 . - 0 ID=cds-WP_001156218.1;Parent=gene-CCO40_RS10675;Dbxref=GenBank:WP_001156218.1;Name=WP_001156218.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460613.1;locus_tag=CCO40_RS10675;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_001156218.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 2215108 2215256 . - . ID=gene-CCO40_RS10680;Name=CCO40_RS10680;end_range=2215256,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS10680;old_locus_tag=CCO40_10680;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 2215108 2215256 . - 0 ID=cds-CCO40_RS10680;Parent=gene-CCO40_RS10680;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=2215256,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=CCO40_RS10680;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 2215212 2215364 . + . ID=gene-CCO40_RS22630;Name=CCO40_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22630 NZ_CP075116.1 Protein Homology CDS 2215212 2215364 . + 0 ID=cds-WP_000089155.1;Parent=gene-CCO40_RS22630;Dbxref=GenBank:WP_000089155.1;Name=WP_000089155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465579.1;locus_tag=CCO40_RS22630;product=hypothetical protein;protein_id=WP_000089155.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2215357 2215695 . + . ID=gene-CCO40_RS10685;Name=CCO40_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10685;old_locus_tag=CCO40_10685 NZ_CP075116.1 Protein Homology CDS 2215357 2215695 . + 0 ID=cds-WP_000159240.1;Parent=gene-CCO40_RS10685;Dbxref=GenBank:WP_000159240.1;Name=WP_000159240.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460612.1;locus_tag=CCO40_RS10685;product=SMR family transporter;protein_id=WP_000159240.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2215745 2216179 . - . ID=gene-CCO40_RS10690;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=CCO40_RS10690;old_locus_tag=CCO40_10690 NZ_CP075116.1 Protein Homology CDS 2215745 2216179 . - 0 ID=cds-WP_001082296.1;Parent=gene-CCO40_RS10690;Dbxref=GenBank:WP_001082296.1;Name=WP_001082296.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460611.1;locus_tag=CCO40_RS10690;product=universal stress protein UspF;protein_id=WP_001082296.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2216661 2220185 . - . ID=gene-CCO40_RS10695;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=CCO40_RS10695;old_locus_tag=CCO40_10695 NZ_CP075116.1 Protein Homology CDS 2216661 2220185 . - 0 ID=cds-WP_094889277.1;Parent=gene-CCO40_RS10695;Dbxref=GenBank:WP_094889277.1;Name=WP_094889277.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=CCO40_RS10695;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_094889277.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2220246 2220557 . - . ID=gene-CCO40_RS10700;Name=CCO40_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10700;old_locus_tag=CCO40_10700 NZ_CP075116.1 Protein Homology CDS 2220246 2220557 . - 0 ID=cds-WP_031603716.1;Parent=gene-CCO40_RS10700;Dbxref=GenBank:WP_031603716.1;Name=WP_031603716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=CCO40_RS10700;product=hypothetical protein;protein_id=WP_031603716.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2220461 2220727 . + . ID=gene-CCO40_RS10705;Name=CCO40_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10705;old_locus_tag=CCO40_10705 NZ_CP075116.1 Protein Homology CDS 2220461 2220727 . + 0 ID=cds-WP_001200679.1;Parent=gene-CCO40_RS10705;Dbxref=GenBank:WP_001200679.1;Name=WP_001200679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=CCO40_RS10705;product=putative hemolysin;protein_id=WP_001200679.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2220771 2221181 . - . ID=gene-CCO40_RS10710;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=CCO40_RS10710;old_locus_tag=CCO40_10710 NZ_CP075116.1 Protein Homology CDS 2220771 2221181 . - 0 ID=cds-WP_000725242.1;Parent=gene-CCO40_RS10710;Dbxref=GenBank:WP_000725242.1;Name=WP_000725242.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460607.1;locus_tag=CCO40_RS10710;product=heat shock protein HslJ;protein_id=WP_000725242.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2221292 2222281 . - . ID=gene-CCO40_RS10715;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=CCO40_RS10715;old_locus_tag=CCO40_10715 NZ_CP075116.1 Protein Homology CDS 2221292 2222281 . - 0 ID=cds-WP_000762206.1;Parent=gene-CCO40_RS10715;Dbxref=GenBank:WP_000762206.1;Name=WP_000762206.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460606.1;locus_tag=CCO40_RS10715;product=D-lactate dehydrogenase;protein_id=WP_000762206.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2222521 2225157 . + . ID=gene-CCO40_RS10720;Name=CCO40_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10720;old_locus_tag=CCO40_10720 NZ_CP075116.1 Protein Homology CDS 2222521 2225157 . + 0 ID=cds-WP_094889276.1;Parent=gene-CCO40_RS10720;Dbxref=GenBank:WP_094889276.1;Name=WP_094889276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460605.1;locus_tag=CCO40_RS10720;product=YdbH family protein;protein_id=WP_094889276.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2225157 2225348 . + . ID=gene-CCO40_RS10725;Name=CCO40_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10725;old_locus_tag=CCO40_10725 NZ_CP075116.1 Protein Homology CDS 2225157 2225348 . + 0 ID=cds-WP_000784063.1;Parent=gene-CCO40_RS10725;Dbxref=GenBank:WP_000784063.1;Name=WP_000784063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460604.1;locus_tag=CCO40_RS10725;product=YnbE family lipoprotein;protein_id=WP_000784063.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2225356 2225679 . + . ID=gene-CCO40_RS10730;Name=CCO40_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10730;old_locus_tag=CCO40_10730 NZ_CP075116.1 Protein Homology CDS 2225356 2225679 . + 0 ID=cds-WP_000760414.1;Parent=gene-CCO40_RS10730;Dbxref=GenBank:WP_000760414.1;Name=WP_000760414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460603.1;locus_tag=CCO40_RS10730;product=YdbL family probable chaperone protein;protein_id=WP_000760414.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2225822 2226271 . + . ID=gene-CCO40_RS10735;Name=CCO40_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10735;old_locus_tag=CCO40_10735 NZ_CP075116.1 Protein Homology CDS 2225822 2226271 . + 0 ID=cds-WP_001531579.1;Parent=gene-CCO40_RS10735;Dbxref=GenBank:WP_001531579.1;Name=WP_001531579.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460602.1;locus_tag=CCO40_RS10735;product=GFA family protein;protein_id=WP_001531579.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2226268 2226873 . - . ID=gene-CCO40_RS10740;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=CCO40_RS10740;old_locus_tag=CCO40_10740 NZ_CP075116.1 Protein Homology CDS 2226268 2226873 . - 0 ID=cds-WP_000048924.1;Parent=gene-CCO40_RS10740;Dbxref=GenBank:WP_000048924.1;Name=WP_000048924.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460601.1;locus_tag=CCO40_RS10740;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048924.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2227074 2230976 . + . ID=gene-CCO40_RS10745;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=CCO40_RS10745;old_locus_tag=CCO40_10745 NZ_CP075116.1 Protein Homology CDS 2227074 2230976 . + 0 ID=cds-WP_023602535.1;Parent=gene-CCO40_RS10745;Dbxref=GenBank:WP_023602535.1;Name=WP_023602535.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=CCO40_RS10745;product=ATP-dependent RNA helicase HrpA;protein_id=WP_023602535.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2231040 2231840 . + . ID=gene-CCO40_RS10750;Name=CCO40_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10750;old_locus_tag=CCO40_10750 NZ_CP075116.1 Protein Homology CDS 2231040 2231840 . + 0 ID=cds-WP_001098498.1;Parent=gene-CCO40_RS10750;Dbxref=GenBank:WP_001098498.1;Name=WP_001098498.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460599.1;locus_tag=CCO40_RS10750;product=YdcF family protein;protein_id=WP_001098498.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2231957 2232487 . + . ID=gene-CCO40_RS10755;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=CCO40_RS10755;old_locus_tag=CCO40_10755 NZ_CP075116.1 Protein Homology CDS 2231957 2232487 . + 0 ID=cds-WP_000527273.1;Parent=gene-CCO40_RS10755;Dbxref=GenBank:WP_000527273.1;Name=WP_000527273.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=CCO40_RS10755;product=cytochrome b561;protein_id=WP_000527273.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2232758 2233420 . - . ID=gene-CCO40_RS10760;Name=CCO40_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10760;old_locus_tag=CCO40_10760 NZ_CP075116.1 Protein Homology CDS 2232758 2233420 . - 0 ID=cds-WP_001520112.1;Parent=gene-CCO40_RS10760;Dbxref=GenBank:WP_001520112.1;Name=WP_001520112.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551832.1;locus_tag=CCO40_RS10760;product=class I SAM-dependent methyltransferase;protein_id=WP_001520112.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2233884 2235434 . - . ID=gene-CCO40_RS10765;Name=CCO40_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10765;old_locus_tag=CCO40_10765 NZ_CP075116.1 Protein Homology CDS 2233884 2235434 . - 0 ID=cds-WP_001520091.1;Parent=gene-CCO40_RS10765;Dbxref=GenBank:WP_001520091.1;Name=WP_001520091.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460596.1;locus_tag=CCO40_RS10765;product=glycosyltransferase family 39 protein;protein_id=WP_001520091.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2235571 2236251 . - . ID=gene-CCO40_RS10770;Name=CCO40_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10770;old_locus_tag=CCO40_10770 NZ_CP075116.1 Protein Homology CDS 2235571 2236251 . - 0 ID=cds-WP_094889275.1;Parent=gene-CCO40_RS10770;Dbxref=GenBank:WP_094889275.1;Name=WP_094889275.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460595.1;locus_tag=CCO40_RS10770;product=amino acid ABC transporter permease;protein_id=WP_094889275.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2236248 2236979 . - . ID=gene-CCO40_RS10775;Name=CCO40_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10775;old_locus_tag=CCO40_10775 NZ_CP075116.1 Protein Homology CDS 2236248 2236979 . - 0 ID=cds-WP_001196340.1;Parent=gene-CCO40_RS10775;Dbxref=GenBank:WP_001196340.1;Name=WP_001196340.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460594.1;locus_tag=CCO40_RS10775;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_001196340.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2237004 2237651 . - . ID=gene-CCO40_RS10780;Name=CCO40_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10780;old_locus_tag=CCO40_10780 NZ_CP075116.1 Protein Homology CDS 2237004 2237651 . - 0 ID=cds-WP_000094446.1;Parent=gene-CCO40_RS10780;Dbxref=GenBank:WP_000094446.1;Name=WP_000094446.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460593.1;locus_tag=CCO40_RS10780;product=amino acid ABC transporter permease;protein_id=WP_000094446.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2237658 2238419 . - . ID=gene-CCO40_RS10785;Name=CCO40_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10785;old_locus_tag=CCO40_10785 NZ_CP075116.1 Protein Homology CDS 2237658 2238419 . - 0 ID=cds-WP_000949370.1;Parent=gene-CCO40_RS10785;Dbxref=GenBank:WP_000949370.1;Name=WP_000949370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460592.1;locus_tag=CCO40_RS10785;product=transporter substrate-binding domain-containing protein;protein_id=WP_000949370.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2239326 2239670 . + . ID=gene-CCO40_RS10790;Name=CCO40_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10790;old_locus_tag=CCO40_10790 NZ_CP075116.1 Protein Homology CDS 2239326 2239670 . + 0 ID=cds-WP_000281185.1;Parent=gene-CCO40_RS10790;Dbxref=GenBank:WP_000281185.1;Name=WP_000281185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460591.1;locus_tag=CCO40_RS10790;product=DUF1294 domain-containing protein;protein_id=WP_000281185.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2239791 2241017 . - . ID=gene-CCO40_RS10795;Name=sseJ;gbkey=Gene;gene=sseJ;gene_biotype=protein_coding;locus_tag=CCO40_RS10795;old_locus_tag=CCO40_10795 NZ_CP075116.1 Protein Homology CDS 2239791 2241017 . - 0 ID=cds-WP_094889274.1;Parent=gene-CCO40_RS10795;Dbxref=GenBank:WP_094889274.1;Name=WP_094889274.1;gbkey=CDS;gene=sseJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=CCO40_RS10795;product=SPI-2 type III secretion system effector SseJ;protein_id=WP_094889274.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2241443 2242159 . + . ID=gene-CCO40_RS10800;Name=CCO40_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10800;old_locus_tag=CCO40_10800 NZ_CP075116.1 Protein Homology CDS 2241443 2242159 . + 0 ID=cds-WP_000997196.1;Parent=gene-CCO40_RS10800;Dbxref=GenBank:WP_000997196.1;Name=WP_000997196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=CCO40_RS10800;product=STM1630 family protein;protein_id=WP_000997196.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2242288 2242689 . - . ID=gene-CCO40_RS10805;Name=steB;gbkey=Gene;gene=steB;gene_biotype=protein_coding;locus_tag=CCO40_RS10805;old_locus_tag=CCO40_10805 NZ_CP075116.1 Protein Homology CDS 2242288 2242689 . - 0 ID=cds-WP_094889273.1;Parent=gene-CCO40_RS10805;Dbxref=GenBank:WP_094889273.1;Name=WP_094889273.1;gbkey=CDS;gene=steB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448047.1;locus_tag=CCO40_RS10805;product=type III secretion system effector SteB;protein_id=WP_094889273.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2243212 2243487 . + . ID=gene-CCO40_RS10810;Name=CCO40_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10810;old_locus_tag=CCO40_10810 NZ_CP075116.1 Protein Homology CDS 2243212 2243487 . + 0 ID=cds-WP_001120770.1;Parent=gene-CCO40_RS10810;Dbxref=GenBank:WP_001120770.1;Name=WP_001120770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=CCO40_RS10810;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_001120770.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2243519 2244637 . + . ID=gene-CCO40_RS10815;Name=CCO40_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10815;old_locus_tag=CCO40_10815 NZ_CP075116.1 Protein Homology CDS 2243519 2244637 . + 0 ID=cds-WP_000842142.1;Parent=gene-CCO40_RS10815;Dbxref=GenBank:WP_000842142.1;Name=WP_000842142.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=CCO40_RS10815;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_000842142.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2244806 2246431 . + . ID=gene-CCO40_RS10820;Name=CCO40_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10820;old_locus_tag=CCO40_10820 NZ_CP075116.1 Protein Homology CDS 2244806 2246431 . + 0 ID=cds-WP_000528481.1;Parent=gene-CCO40_RS10820;Dbxref=GenBank:WP_000528481.1;Name=WP_000528481.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=CCO40_RS10820;product=methyl-accepting chemotaxis protein;protein_id=WP_000528481.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2246492 2247415 . - . ID=gene-CCO40_RS10825;Name=CCO40_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10825;old_locus_tag=CCO40_10825 NZ_CP075116.1 Protein Homology CDS 2246492 2247415 . - 0 ID=cds-WP_000414259.1;Parent=gene-CCO40_RS10825;Dbxref=GenBank:WP_000414259.1;Name=WP_000414259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=CCO40_RS10825;product=LysR substrate-binding domain-containing protein;protein_id=WP_000414259.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2247708 2249051 . + . ID=gene-CCO40_RS10830;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=CCO40_RS10830;old_locus_tag=CCO40_10830 NZ_CP075116.1 Protein Homology CDS 2247708 2249051 . + 0 ID=cds-WP_079943596.1;Parent=gene-CCO40_RS10830;Dbxref=GenBank:WP_079943596.1;Name=WP_079943596.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=CCO40_RS10830;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_079943596.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2249100 2250608 . + . ID=gene-CCO40_RS10835;Name=CCO40_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10835;old_locus_tag=CCO40_10835 NZ_CP075116.1 Protein Homology CDS 2249100 2250608 . + 0 ID=cds-WP_000933978.1;Parent=gene-CCO40_RS10835;Dbxref=GenBank:WP_000933978.1;Name=WP_000933978.1;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=CCO40_RS10835;product=carboxylesterase/lipase family protein;protein_id=WP_000933978.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2250828 2252483 . + . ID=gene-CCO40_RS10840;Name=CCO40_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10840;old_locus_tag=CCO40_10840 NZ_CP075116.1 Protein Homology CDS 2250828 2252483 . + 0 ID=cds-WP_094889272.1;Parent=gene-CCO40_RS10840;Dbxref=GenBank:WP_094889272.1;Name=WP_094889272.1;Ontology_term=GO:0009250,GO:0051274,GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;go_process=glucan biosynthetic process|0009250||IEA,beta-glucan biosynthetic process|0051274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=CCO40_RS10840;product=glucan biosynthesis protein D;protein_id=WP_094889272.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2252679 2253254 . + . ID=gene-CCO40_RS10845;Name=CCO40_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10845;old_locus_tag=CCO40_10845 NZ_CP075116.1 Protein Homology CDS 2252679 2253254 . + 0 ID=cds-WP_079973567.1;Parent=gene-CCO40_RS10845;Dbxref=GenBank:WP_079973567.1;Name=WP_079973567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460580.1;locus_tag=CCO40_RS10845;product=YceI family protein;protein_id=WP_079973567.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2253266 2254468 . + . ID=gene-CCO40_RS10850;Name=CCO40_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10850;old_locus_tag=CCO40_10850 NZ_CP075116.1 Protein Homology CDS 2253266 2254468 . + 0 ID=cds-WP_000848077.1;Parent=gene-CCO40_RS10850;Dbxref=GenBank:WP_000848077.1;Name=WP_000848077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460579.1;locus_tag=CCO40_RS10850;product=lactate oxidase;protein_id=WP_000848077.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2254515 2254952 . - . ID=gene-CCO40_RS10855;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=CCO40_RS10855;old_locus_tag=CCO40_10855 NZ_CP075116.1 Protein Homology CDS 2254515 2254952 . - 0 ID=cds-WP_094889271.1;Parent=gene-CCO40_RS10855;Dbxref=GenBank:WP_094889271.1;Name=WP_094889271.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=CCO40_RS10855;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=WP_094889271.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2254952 2255743 . - . ID=gene-CCO40_RS10860;Name=CCO40_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10860;old_locus_tag=CCO40_10860 NZ_CP075116.1 Protein Homology CDS 2254952 2255743 . - 0 ID=cds-WP_001682390.1;Parent=gene-CCO40_RS10860;Dbxref=GenBank:WP_001682390.1;Name=WP_001682390.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460577.1;locus_tag=CCO40_RS10860;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001682390.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2255759 2256391 . - . ID=gene-CCO40_RS10865;Name=CCO40_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10865;old_locus_tag=CCO40_10865 NZ_CP075116.1 Protein Homology CDS 2255759 2256391 . - 0 ID=cds-WP_045717712.1;Parent=gene-CCO40_RS10865;Dbxref=GenBank:WP_045717712.1;Name=WP_045717712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460576.1;locus_tag=CCO40_RS10865;product=ribulose-phosphate 3 epimerase family protein;protein_id=WP_045717712.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2256403 2256840 . - . ID=gene-CCO40_RS10870;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;locus_tag=CCO40_RS10870;old_locus_tag=CCO40_10870 NZ_CP075116.1 Protein Homology CDS 2256403 2256840 . - 0 ID=cds-WP_000606454.1;Parent=gene-CCO40_RS10870;Dbxref=GenBank:WP_000606454.1;Name=WP_000606454.1;gbkey=CDS;gene=sgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460575.1;locus_tag=CCO40_RS10870;product=SgcA family PTS sugar transporter subunit IIA;protein_id=WP_000606454.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2256972 2257778 . - . ID=gene-CCO40_RS10875;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=CCO40_RS10875;old_locus_tag=CCO40_10875 NZ_CP075116.1 Protein Homology CDS 2256972 2257778 . - 0 ID=cds-WP_000118615.1;Parent=gene-CCO40_RS10875;Dbxref=GenBank:WP_000118615.1;Name=WP_000118615.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=CCO40_RS10875;product=BtpA family protein SgcQ;protein_id=WP_000118615.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2257792 2259105 . - . ID=gene-CCO40_RS10880;Name=sgcC;gbkey=Gene;gene=sgcC;gene_biotype=protein_coding;locus_tag=CCO40_RS10880;old_locus_tag=CCO40_10880 NZ_CP075116.1 Protein Homology CDS 2257792 2259105 . - 0 ID=cds-WP_045717713.1;Parent=gene-CCO40_RS10880;Dbxref=GenBank:WP_045717713.1;Name=WP_045717713.1;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=CCO40_RS10880;product=PTS sugar transporter subunit IIC SgcC;protein_id=WP_045717713.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2259116 2259397 . - . ID=gene-CCO40_RS10885;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;locus_tag=CCO40_RS10885;old_locus_tag=CCO40_10885 NZ_CP075116.1 Protein Homology CDS 2259116 2259397 . - 0 ID=cds-WP_000976132.1;Parent=gene-CCO40_RS10885;Dbxref=GenBank:WP_000976132.1;Name=WP_000976132.1;gbkey=CDS;gene=sgcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460572.1;locus_tag=CCO40_RS10885;product=PTS sugar transporter subunit IIB SgcB;protein_id=WP_000976132.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2259394 2260512 . - . ID=gene-CCO40_RS10890;Name=CCO40_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10890;old_locus_tag=CCO40_10890 NZ_CP075116.1 Protein Homology CDS 2259394 2260512 . - 0 ID=cds-WP_000144629.1;Parent=gene-CCO40_RS10890;Dbxref=GenBank:WP_000144629.1;Name=WP_000144629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460571.1;locus_tag=CCO40_RS10890;product=M42 family metallopeptidase;protein_id=WP_000144629.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2260729 2261268 . + . ID=gene-CCO40_RS10895;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=CCO40_RS10895;old_locus_tag=CCO40_10895 NZ_CP075116.1 Protein Homology CDS 2260729 2261268 . + 0 ID=cds-WP_000229313.1;Parent=gene-CCO40_RS10895;Dbxref=GenBank:WP_000229313.1;Name=WP_000229313.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460570.1;locus_tag=CCO40_RS10895;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_000229313.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2261265 2262245 . - . ID=gene-CCO40_RS10900;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=CCO40_RS10900;old_locus_tag=CCO40_10900 NZ_CP075116.1 Protein Homology CDS 2261265 2262245 . - 0 ID=cds-WP_023993284.1;Parent=gene-CCO40_RS10900;Dbxref=GenBank:WP_023993284.1;Name=WP_023993284.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460569.1;locus_tag=CCO40_RS10900;product=YdcK family protein;protein_id=WP_023993284.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2262352 2263365 . + . ID=gene-CCO40_RS10905;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=CCO40_RS10905;old_locus_tag=CCO40_10905 NZ_CP075116.1 Protein Homology CDS 2262352 2263365 . + 0 ID=cds-WP_045717714.1;Parent=gene-CCO40_RS10905;Dbxref=GenBank:WP_045717714.1;Name=WP_045717714.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460568.1;locus_tag=CCO40_RS10905;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_045717714.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2263352 2263948 . + . ID=gene-CCO40_RS10910;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=CCO40_RS10910;old_locus_tag=CCO40_10910 NZ_CP075116.1 Protein Homology CDS 2263352 2263948 . + 0 ID=cds-WP_000218280.1;Parent=gene-CCO40_RS10910;Dbxref=GenBank:WP_000218280.1;Name=WP_000218280.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=CCO40_RS10910;product=tellurite resistance methyltransferase TehB;protein_id=WP_000218280.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2264105 2264773 . + . ID=gene-CCO40_RS10915;Name=CCO40_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10915;old_locus_tag=CCO40_10915 NZ_CP075116.1 Protein Homology CDS 2264105 2264773 . + 0 ID=cds-WP_001259025.1;Parent=gene-CCO40_RS10915;Dbxref=GenBank:WP_001259025.1;Name=WP_001259025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460566.1;locus_tag=CCO40_RS10915;product=DUF3313 domain-containing protein;protein_id=WP_001259025.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2264827 2266005 . - . ID=gene-CCO40_RS10920;Name=CCO40_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10920;old_locus_tag=CCO40_10920 NZ_CP075116.1 Protein Homology CDS 2264827 2266005 . - 0 ID=cds-WP_045717715.1;Parent=gene-CCO40_RS10920;Dbxref=GenBank:WP_045717715.1;Name=WP_045717715.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=CCO40_RS10920;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_045717715.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2266097 2266633 . + . ID=gene-CCO40_RS10925;Name=CCO40_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10925;old_locus_tag=CCO40_10925 NZ_CP075116.1 Protein Homology CDS 2266097 2266633 . + 0 ID=cds-WP_023208751.1;Parent=gene-CCO40_RS10925;Dbxref=GenBank:WP_023208751.1;Name=WP_023208751.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460564.1;locus_tag=CCO40_RS10925;product=helix-turn-helix domain-containing protein;protein_id=WP_023208751.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2266712 2268676 . + . ID=gene-CCO40_RS10930;Name=CCO40_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10930;old_locus_tag=CCO40_10930 NZ_CP075116.1 Protein Homology CDS 2266712 2268676 . + 0 ID=cds-WP_094889270.1;Parent=gene-CCO40_RS10930;Dbxref=GenBank:WP_094889270.1;Name=WP_094889270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=CCO40_RS10930;product=peptidase U32 family protein;protein_id=WP_094889270.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2268677 2268907 . - . ID=gene-CCO40_RS10935;Name=CCO40_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10935;old_locus_tag=CCO40_10935 NZ_CP075116.1 Protein Homology CDS 2268677 2268907 . - 0 ID=cds-WP_001537894.1;Parent=gene-CCO40_RS10935;Dbxref=GenBank:WP_001537894.1;Name=WP_001537894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460562.1;locus_tag=CCO40_RS10935;product=YncJ family protein;protein_id=WP_001537894.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2269180 2270130 . - . ID=gene-CCO40_RS10940;Name=sifB;gbkey=Gene;gene=sifB;gene_biotype=protein_coding;locus_tag=CCO40_RS10940;old_locus_tag=CCO40_10940 NZ_CP075116.1 Protein Homology CDS 2269180 2270130 . - 0 ID=cds-WP_094889269.1;Parent=gene-CCO40_RS10940;Dbxref=GenBank:WP_094889269.1;Name=WP_094889269.1;gbkey=CDS;gene=sifB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460561.1;locus_tag=CCO40_RS10940;product=SPI-2 type III secretion system effector SifB;protein_id=WP_094889269.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2270657 2271055 . + . ID=gene-CCO40_RS10945;Name=ugtL;gbkey=Gene;gene=ugtL;gene_biotype=protein_coding;locus_tag=CCO40_RS10945;old_locus_tag=CCO40_10945 NZ_CP075116.1 Protein Homology CDS 2270657 2271055 . + 0 ID=cds-WP_094889268.1;Parent=gene-CCO40_RS10945;Dbxref=GenBank:WP_094889268.1;Name=WP_094889268.1;gbkey=CDS;gene=ugtL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460560.1;locus_tag=CCO40_RS10945;product=regulatory protein UgtL;protein_id=WP_094889268.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 2271088 2271319 . + . ID=gene-CCO40_RS10950;Name=CCO40_RS10950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS10950;old_locus_tag=CCO40_10950;pseudo=true NZ_CP075116.1 Protein Homology CDS 2271088 2271319 . + 0 ID=cds-CCO40_RS10950;Parent=gene-CCO40_RS10950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448018.1;locus_tag=CCO40_RS10950;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 2271578 2272348 . + . ID=gene-CCO40_RS10955;Name=CCO40_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10955;old_locus_tag=CCO40_10955 NZ_CP075116.1 Protein Homology CDS 2271578 2272348 . + 0 ID=cds-WP_094889267.1;Parent=gene-CCO40_RS10955;Dbxref=GenBank:WP_094889267.1;Name=WP_094889267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460558.1;locus_tag=CCO40_RS10955;product=M15 family metallopeptidase;protein_id=WP_094889267.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2272484 2273908 . + . ID=gene-CCO40_RS10960;Name=ycdR;gbkey=Gene;gene=ycdR;gene_biotype=protein_coding;locus_tag=CCO40_RS10960;old_locus_tag=CCO40_10960 NZ_CP075116.1 Protein Homology CDS 2272484 2273908 . + 0 ID=cds-WP_000760698.1;Parent=gene-CCO40_RS10960;Dbxref=GenBank:WP_000760698.1;Name=WP_000760698.1;gbkey=CDS;gene=ycdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=CCO40_RS10960;product=GntR family transcriptional regulator YdcR;protein_id=WP_000760698.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2274023 2275468 . + . ID=gene-CCO40_RS10965;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=CCO40_RS10965;old_locus_tag=CCO40_10965 NZ_CP075116.1 Protein Homology CDS 2274023 2275468 . + 0 ID=cds-WP_000158093.1;Parent=gene-CCO40_RS10965;Dbxref=GenBank:WP_000158093.1;Name=WP_000158093.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460556.3;locus_tag=CCO40_RS10965;product=aminobutyraldehyde dehydrogenase;protein_id=WP_000158093.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2275573 2275668 . - . ID=gene-CCO40_RS10970;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=CCO40_RS10970;old_locus_tag=CCO40_10970 NZ_CP075116.1 Protein Homology CDS 2275573 2275668 . - 0 ID=cds-WP_001103198.1;Parent=gene-CCO40_RS10970;Dbxref=GenBank:WP_001103198.1;Name=WP_001103198.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=CCO40_RS10970;product=stress response membrane protein YncL;protein_id=WP_001103198.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2275867 2276040 . + . ID=gene-CCO40_RS10975;Name=CCO40_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10975;old_locus_tag=CCO40_10975 NZ_CP075116.1 Protein Homology CDS 2275867 2276040 . + 0 ID=cds-WP_000171943.1;Parent=gene-CCO40_RS10975;Dbxref=GenBank:WP_000171943.1;Name=WP_000171943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=CCO40_RS10975;product=GhoT/OrtT family toxin;protein_id=WP_000171943.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2276085 2278229 . - . ID=gene-CCO40_RS10980;Name=srfC;gbkey=Gene;gene=srfC;gene_biotype=protein_coding;locus_tag=CCO40_RS10980;old_locus_tag=CCO40_10980 NZ_CP075116.1 Protein Homology CDS 2276085 2278229 . - 0 ID=cds-WP_094889266.1;Parent=gene-CCO40_RS10980;Dbxref=GenBank:WP_094889266.1;Name=WP_094889266.1;gbkey=CDS;gene=srfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460554.1;locus_tag=CCO40_RS10980;product=virulence-associated effector SrfC;protein_id=WP_094889266.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2278226 2281207 . - . ID=gene-CCO40_RS10985;Name=CCO40_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10985;old_locus_tag=CCO40_10985 NZ_CP075116.1 Protein Homology CDS 2278226 2281207 . - 0 ID=cds-WP_050901188.1;Parent=gene-CCO40_RS10985;Dbxref=GenBank:WP_050901188.1;Name=WP_050901188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=CCO40_RS10985;product=virulence factor SrfB;protein_id=WP_050901188.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2281212 2282531 . - . ID=gene-CCO40_RS10990;Name=srfA;gbkey=Gene;gene=srfA;gene_biotype=protein_coding;locus_tag=CCO40_RS10990;old_locus_tag=CCO40_10990 NZ_CP075116.1 Protein Homology CDS 2281212 2282531 . - 0 ID=cds-WP_094889265.1;Parent=gene-CCO40_RS10990;Dbxref=GenBank:WP_094889265.1;Name=WP_094889265.1;gbkey=CDS;gene=srfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=CCO40_RS10990;product=virulence-associated effector SrfA;protein_id=WP_094889265.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2282755 2282988 . + . ID=gene-CCO40_RS10995;Name=CCO40_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS10995;old_locus_tag=CCO40_10995 NZ_CP075116.1 Protein Homology CDS 2282755 2282988 . + 0 ID=cds-WP_000018720.1;Parent=gene-CCO40_RS10995;Dbxref=GenBank:WP_000018720.1;Name=WP_000018720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460551.1;locus_tag=CCO40_RS10995;product=YdcY family protein;protein_id=WP_000018720.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2282993 2283442 . - . ID=gene-CCO40_RS11000;Name=CCO40_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11000;old_locus_tag=CCO40_11000 NZ_CP075116.1 Protein Homology CDS 2282993 2283442 . - 0 ID=cds-WP_024158036.1;Parent=gene-CCO40_RS11000;Dbxref=GenBank:WP_024158036.1;Name=WP_024158036.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460550.1;locus_tag=CCO40_RS11000;product=DMT family transporter;protein_id=WP_024158036.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2283442 2283957 . - . ID=gene-CCO40_RS11005;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=CCO40_RS11005;old_locus_tag=CCO40_11005 NZ_CP075116.1 Protein Homology CDS 2283442 2283957 . - 0 ID=cds-WP_000155373.1;Parent=gene-CCO40_RS11005;Dbxref=GenBank:WP_000155373.1;Name=WP_000155373.1;Note=Keep exception level- 87%25 similar to E. coli K12 P76112%2C different gene symbol;gbkey=CDS;gene=mddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460549.1;locus_tag=CCO40_RS11005;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=WP_000155373.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2284169 2285206 . + . ID=gene-CCO40_RS11010;Name=curA;gbkey=Gene;gene=curA;gene_biotype=protein_coding;locus_tag=CCO40_RS11010;old_locus_tag=CCO40_11010 NZ_CP075116.1 Protein Homology CDS 2284169 2285206 . + 0 ID=cds-WP_061380087.1;Parent=gene-CCO40_RS11010;Dbxref=GenBank:WP_061380087.1;Name=WP_061380087.1;Ontology_term=GO:0016491,GO:0016628;gbkey=CDS;gene=curA;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517827.1;locus_tag=CCO40_RS11010;product=NADPH-dependent curcumin/dihydrocurcumin reductase;protein_id=WP_061380087.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2285540 2286205 . + . ID=gene-CCO40_RS11015;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=CCO40_RS11015;old_locus_tag=CCO40_11015 NZ_CP075116.1 Protein Homology CDS 2285540 2286205 . + 0 ID=cds-WP_001119584.1;Parent=gene-CCO40_RS11015;Dbxref=GenBank:WP_001119584.1;Name=WP_001119584.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460547.1;locus_tag=CCO40_RS11015;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WP_001119584.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2286261 2288381 . - . ID=gene-CCO40_RS11020;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=CCO40_RS11020;old_locus_tag=CCO40_11020 NZ_CP075116.1 Protein Homology CDS 2286261 2288381 . - 0 ID=cds-WP_000692034.1;Parent=gene-CCO40_RS11020;Dbxref=GenBank:WP_000692034.1;Name=WP_000692034.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=CCO40_RS11020;product=TonB-dependent receptor PqqU;protein_id=WP_000692034.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2288645 2289706 . + . ID=gene-CCO40_RS11025;Name=yncE;gbkey=Gene;gene=yncE;gene_biotype=protein_coding;locus_tag=CCO40_RS11025;old_locus_tag=CCO40_11025 NZ_CP075116.1 Protein Homology CDS 2288645 2289706 . + 0 ID=cds-WP_000550637.1;Parent=gene-CCO40_RS11025;Dbxref=GenBank:WP_000550637.1;Name=WP_000550637.1;gbkey=CDS;gene=yncE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460545.1;locus_tag=CCO40_RS11025;product=7-bladed beta-propeller protein YncE;protein_id=WP_000550637.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2289851 2290072 . + . ID=gene-CCO40_RS11030;Name=CCO40_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11030;old_locus_tag=CCO40_11030 NZ_CP075116.1 Protein Homology CDS 2289851 2290072 . + 0 ID=cds-WP_000732362.1;Parent=gene-CCO40_RS11030;Dbxref=GenBank:WP_000732362.1;Name=WP_000732362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460544.1;locus_tag=CCO40_RS11030;product=YgdI/YgdR family lipoprotein;protein_id=WP_000732362.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2290149 2291642 . - . ID=gene-CCO40_RS11035;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=CCO40_RS11035;old_locus_tag=CCO40_11035 NZ_CP075116.1 Protein Homology CDS 2290149 2291642 . - 0 ID=cds-WP_000857110.1;Parent=gene-CCO40_RS11035;Dbxref=GenBank:WP_000857110.1;Name=WP_000857110.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460543.1;locus_tag=CCO40_RS11035;product=L-asparagine permease;protein_id=WP_000857110.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2292155 2292787 . + . ID=gene-CCO40_RS11040;Name=CCO40_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11040;old_locus_tag=CCO40_11040 NZ_CP075116.1 Protein Homology CDS 2292155 2292787 . + 0 ID=cds-WP_001120854.1;Parent=gene-CCO40_RS11040;Dbxref=GenBank:WP_001120854.1;Name=WP_001120854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460542.1;locus_tag=CCO40_RS11040;product=hypothetical protein;protein_id=WP_001120854.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2293071 2293916 . + . ID=gene-CCO40_RS11045;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=CCO40_RS11045;old_locus_tag=CCO40_11045 NZ_CP075116.1 Protein Homology CDS 2293071 2293916 . + 0 ID=cds-WP_045717719.1;Parent=gene-CCO40_RS11045;Dbxref=GenBank:WP_045717719.1;Name=WP_045717719.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=CCO40_RS11045;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_045717719.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2293952 2294845 . - . ID=gene-CCO40_RS11050;Name=CCO40_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11050;old_locus_tag=CCO40_11050 NZ_CP075116.1 Protein Homology CDS 2293952 2294845 . - 0 ID=cds-WP_094889264.1;Parent=gene-CCO40_RS11050;Dbxref=GenBank:WP_094889264.1;Name=WP_094889264.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460540.1;locus_tag=CCO40_RS11050;product=PhzF family isomerase;protein_id=WP_094889264.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2294951 2295631 . - . ID=gene-CCO40_RS11055;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=CCO40_RS11055;old_locus_tag=CCO40_11055 NZ_CP075116.1 Protein Homology CDS 2294951 2295631 . - 0 ID=cds-WP_000617106.1;Parent=gene-CCO40_RS11055;Dbxref=GenBank:WP_000617106.1;Name=WP_000617106.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=CCO40_RS11055;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617106.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2295628 2296323 . - . ID=gene-CCO40_RS11060;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=CCO40_RS11060;old_locus_tag=CCO40_11060 NZ_CP075116.1 Protein Homology CDS 2295628 2296323 . - 0 ID=cds-WP_063809246.1;Parent=gene-CCO40_RS11060;Dbxref=GenBank:WP_063809246.1;Name=WP_063809246.1;Ontology_term=GO:0051131;gbkey=CDS;gene=narW;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460538.1;locus_tag=CCO40_RS11060;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_063809246.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2296323 2297867 . - . ID=gene-CCO40_RS11065;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=CCO40_RS11065;old_locus_tag=CCO40_11065 NZ_CP075116.1 Protein Homology CDS 2296323 2297867 . - 0 ID=cds-WP_045717722.1;Parent=gene-CCO40_RS11065;Dbxref=GenBank:WP_045717722.1;Name=WP_045717722.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=CCO40_RS11065;product=nitrate reductase subunit beta;protein_id=WP_045717722.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2297864 2301604 . - . ID=gene-CCO40_RS11070;Name=CCO40_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11070;old_locus_tag=CCO40_11070 NZ_CP075116.1 Protein Homology CDS 2297864 2301604 . - 0 ID=cds-WP_000040394.1;Parent=gene-CCO40_RS11070;Dbxref=GenBank:WP_000040394.1;Name=WP_000040394.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=CCO40_RS11070;product=nitrate reductase subunit alpha;protein_id=WP_000040394.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2301696 2303084 . - . ID=gene-CCO40_RS11075;Name=CCO40_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11075;old_locus_tag=CCO40_11075 NZ_CP075116.1 Protein Homology CDS 2301696 2303084 . - 0 ID=cds-WP_023250641.1;Parent=gene-CCO40_RS11075;Dbxref=GenBank:WP_023250641.1;Name=WP_023250641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=CCO40_RS11075;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_023250641.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2303299 2303877 . - . ID=gene-CCO40_RS11080;Name=CCO40_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11080;old_locus_tag=CCO40_11080 NZ_CP075116.1 Protein Homology CDS 2303299 2303877 . - 0 ID=cds-WP_000121043.1;Parent=gene-CCO40_RS11080;Dbxref=GenBank:WP_000121043.1;Name=WP_000121043.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460534.1;locus_tag=CCO40_RS11080;product=TetR family transcriptional regulator;protein_id=WP_000121043.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2303995 2305482 . + . ID=gene-CCO40_RS11085;Name=smvA;gbkey=Gene;gene=smvA;gene_biotype=protein_coding;locus_tag=CCO40_RS11085;old_locus_tag=CCO40_11085 NZ_CP075116.1 Protein Homology CDS 2303995 2305482 . + 0 ID=cds-WP_000489736.1;Parent=gene-CCO40_RS11085;Dbxref=GenBank:WP_000489736.1;Name=WP_000489736.1;gbkey=CDS;gene=smvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460533.1;locus_tag=CCO40_RS11085;product=methyl viologen efflux MFS transporter SmvA;protein_id=WP_000489736.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2305507 2305887 . - . ID=gene-CCO40_RS11090;Name=CCO40_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11090;old_locus_tag=CCO40_11090 NZ_CP075116.1 Protein Homology CDS 2305507 2305887 . - 0 ID=cds-WP_014343841.1;Parent=gene-CCO40_RS11090;Dbxref=GenBank:WP_014343841.1;Name=WP_014343841.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=CCO40_RS11090;product=GFA family protein;protein_id=WP_014343841.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2306031 2307119 . - . ID=gene-CCO40_RS11095;Name=ompD;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=CCO40_RS11095;old_locus_tag=CCO40_11095 NZ_CP075116.1 Protein Homology CDS 2306031 2307119 . - 0 ID=cds-WP_000769035.1;Parent=gene-CCO40_RS11095;Dbxref=GenBank:WP_000769035.1;Name=WP_000769035.1;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=CCO40_RS11095;product=porin OmpD;protein_id=WP_000769035.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2307644 2308525 . - . ID=gene-CCO40_RS11100;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=CCO40_RS11100;old_locus_tag=CCO40_11100 NZ_CP075116.1 Protein Homology CDS 2307644 2308525 . - 0 ID=cds-WP_000203799.1;Parent=gene-CCO40_RS11100;Dbxref=GenBank:WP_000203799.1;Name=WP_000203799.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203799.1;locus_tag=CCO40_RS11100;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WP_000203799.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2308803 2311850 . + . ID=gene-CCO40_RS11105;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=CCO40_RS11105;old_locus_tag=CCO40_11105 NZ_CP075116.1 Protein Homology CDS 2308803 2311850 . + 0 ID=cds-WP_001574320.1;Parent=gene-CCO40_RS11105;Dbxref=GenBank:WP_001574320.1;Name=WP_001574320.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=CCO40_RS11105;product=formate dehydrogenase-N subunit alpha;protein_id=WP_001574320.1;transl_except=(pos:2309388..2309390%2Caa:Sec);transl_table=11 NZ_CP075116.1 RefSeq gene 2311864 2312748 . + . ID=gene-CCO40_RS11110;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=CCO40_RS11110;old_locus_tag=CCO40_11110 NZ_CP075116.1 Protein Homology CDS 2311864 2312748 . + 0 ID=cds-WP_000061599.1;Parent=gene-CCO40_RS11110;Dbxref=GenBank:WP_000061599.1;Name=WP_000061599.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=CCO40_RS11110;product=formate dehydrogenase subunit beta;protein_id=WP_000061599.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2312741 2313397 . + . ID=gene-CCO40_RS11115;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=CCO40_RS11115;old_locus_tag=CCO40_11115 NZ_CP075116.1 Protein Homology CDS 2312741 2313397 . + 0 ID=cds-WP_000045657.1;Parent=gene-CCO40_RS11115;Dbxref=GenBank:WP_000045657.1;Name=WP_000045657.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=CCO40_RS11115;product=formate dehydrogenase-N subunit gamma;protein_id=WP_000045657.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2313488 2314498 . - . ID=gene-CCO40_RS11120;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=CCO40_RS11120;old_locus_tag=CCO40_11120 NZ_CP075116.1 Protein Homology CDS 2313488 2314498 . - 0 ID=cds-WP_000642447.1;Parent=gene-CCO40_RS11120;Dbxref=GenBank:WP_000642447.1;Name=WP_000642447.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460526.1;locus_tag=CCO40_RS11120;product=alcohol dehydrogenase AdhP;protein_id=WP_000642447.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2314784 2316481 . - . ID=gene-CCO40_RS11125;Name=CCO40_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11125;old_locus_tag=CCO40_11125 NZ_CP075116.1 Protein Homology CDS 2314784 2316481 . - 0 ID=cds-WP_000450511.1;Parent=gene-CCO40_RS11125;Dbxref=GenBank:WP_000450511.1;Name=WP_000450511.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=CCO40_RS11125;product=NAD-dependent malic enzyme;protein_id=WP_000450511.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2316656 2316799 . - . ID=gene-CCO40_RS11130;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=CCO40_RS11130;old_locus_tag=CCO40_11130 NZ_CP075116.1 Protein Homology CDS 2316656 2316799 . - 0 ID=cds-WP_000841559.1;Parent=gene-CCO40_RS11130;Dbxref=GenBank:WP_000841559.1;Name=WP_000841559.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460524.1;locus_tag=CCO40_RS11130;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841559.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2316894 2317109 . - . ID=gene-CCO40_RS11135;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=CCO40_RS11135;old_locus_tag=CCO40_11135 NZ_CP075116.1 Protein Homology CDS 2316894 2317109 . - 0 ID=cds-WP_000495700.1;Parent=gene-CCO40_RS11135;Dbxref=GenBank:WP_000495700.1;Name=WP_000495700.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460523.1;locus_tag=CCO40_RS11135;product=biofilm-dependent modulation protein;protein_id=WP_000495700.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2317621 2318052 . + . ID=gene-CCO40_RS11140;Name=CCO40_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11140;old_locus_tag=CCO40_11140 NZ_CP075116.1 Protein Homology CDS 2317621 2318052 . + 0 ID=cds-WP_000152297.1;Parent=gene-CCO40_RS11140;Dbxref=GenBank:WP_000152297.1;Name=WP_000152297.1;Ontology_term=GO:0006972,GO:0006979,GO:0033194,GO:0004601,GO:0051920,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=peroxidase activity|0004601||IEA,peroxiredoxin activity|0051920||IEA;go_process=hyperosmotic response|0006972||IEA,response to oxidative stress|0006979||IEA,response to hydroperoxide|0033194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460522.1;locus_tag=CCO40_RS11140;product=OsmC family protein;protein_id=WP_000152297.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2318402 2318731 . + . ID=gene-CCO40_RS11145;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=CCO40_RS11145;old_locus_tag=CCO40_11145 NZ_CP075116.1 Protein Homology CDS 2318402 2318731 . + 0 ID=cds-WP_001032161.1;Parent=gene-CCO40_RS11145;Dbxref=GenBank:WP_001032161.1;Name=WP_001032161.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460521.1;locus_tag=CCO40_RS11145;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001032161.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2318874 2319659 . + . ID=gene-CCO40_RS11150;Name=CCO40_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11150;old_locus_tag=CCO40_11150 NZ_CP075116.1 Protein Homology CDS 2318874 2319659 . + 0 ID=cds-WP_000698599.1;Parent=gene-CCO40_RS11150;Dbxref=GenBank:WP_000698599.1;Name=WP_000698599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460520.1;locus_tag=CCO40_RS11150;product=OBAP family protein;protein_id=WP_000698599.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2319788 2321572 . + . ID=gene-CCO40_RS11155;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=CCO40_RS11155;old_locus_tag=CCO40_11155 NZ_CP075116.1 Protein Homology CDS 2319788 2321572 . + 0 ID=cds-WP_094889262.1;Parent=gene-CCO40_RS11155;Dbxref=GenBank:WP_094889262.1;Name=WP_094889262.1;Ontology_term=GO:0005992,GO:0033942;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460519.1;locus_tag=CCO40_RS11155;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_094889262.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2321569 2324097 . + . ID=gene-CCO40_RS11160;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=CCO40_RS11160;old_locus_tag=CCO40_11160 NZ_CP075116.1 Protein Homology CDS 2321569 2324097 . + 0 ID=cds-WP_094889261.1;Parent=gene-CCO40_RS11160;Dbxref=GenBank:WP_094889261.1;Name=WP_094889261.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=CCO40_RS11160;product=malto-oligosyltrehalose synthase;protein_id=WP_094889261.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2324154 2326229 . + . ID=gene-CCO40_RS11165;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=CCO40_RS11165;old_locus_tag=CCO40_11165 NZ_CP075116.1 Protein Homology CDS 2324154 2326229 . + 0 ID=cds-WP_001748396.1;Parent=gene-CCO40_RS11165;Dbxref=GenBank:WP_001748396.1;Name=WP_001748396.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=CCO40_RS11165;product=glycogen debranching protein GlgX;protein_id=WP_001748396.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2326343 2327545 . - . ID=gene-CCO40_RS11170;Name=CCO40_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11170;old_locus_tag=CCO40_11170 NZ_CP075116.1 Protein Homology CDS 2326343 2327545 . - 0 ID=cds-WP_000347156.1;Parent=gene-CCO40_RS11170;Dbxref=GenBank:WP_000347156.1;Name=WP_000347156.1;Ontology_term=GO:0071265,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460516.1;locus_tag=CCO40_RS11170;product=MalY/PatB family protein;protein_id=WP_000347156.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2327558 2329009 . - . ID=gene-CCO40_RS11175;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=CCO40_RS11175;old_locus_tag=CCO40_11175 NZ_CP075116.1 Protein Homology CDS 2327558 2329009 . - 0 ID=cds-WP_001276631.1;Parent=gene-CCO40_RS11175;Dbxref=GenBank:WP_001276631.1;Name=WP_001276631.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=CCO40_RS11175;product=Na+/H+ antiporter NhaC;protein_id=WP_001276631.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2329153 2330160 . - . ID=gene-CCO40_RS11180;Name=CCO40_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11180;old_locus_tag=CCO40_11180 NZ_CP075116.1 Protein Homology CDS 2329153 2330160 . - 0 ID=cds-WP_000201080.1;Parent=gene-CCO40_RS11180;Dbxref=GenBank:WP_000201080.1;Name=WP_000201080.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460514.1;locus_tag=CCO40_RS11180;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000201080.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2330418 2331884 . + . ID=gene-CCO40_RS11185;Name=CCO40_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11185;old_locus_tag=CCO40_11185 NZ_CP075116.1 Protein Homology CDS 2330418 2331884 . + 0 ID=cds-WP_094889260.1;Parent=gene-CCO40_RS11185;Dbxref=GenBank:WP_094889260.1;Name=WP_094889260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460513.1;locus_tag=CCO40_RS11185;product=hypothetical protein;protein_id=WP_094889260.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2332150 2333130 . - . ID=gene-CCO40_RS11190;Name=CCO40_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11190;old_locus_tag=CCO40_11190 NZ_CP075116.1 Protein Homology CDS 2332150 2333130 . - 0 ID=cds-WP_094889259.1;Parent=gene-CCO40_RS11190;Dbxref=GenBank:WP_094889259.1;Name=WP_094889259.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441349.1;locus_tag=CCO40_RS11190;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_094889259.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2333304 2334212 . - . ID=gene-CCO40_RS11195;Name=CCO40_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11195;old_locus_tag=CCO40_11195 NZ_CP075116.1 Protein Homology CDS 2333304 2334212 . - 0 ID=cds-WP_023994284.1;Parent=gene-CCO40_RS11195;Dbxref=GenBank:WP_023994284.1;Name=WP_023994284.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176636.1;locus_tag=CCO40_RS11195;product=LysR family transcriptional regulator;protein_id=WP_023994284.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 2335101 2335890 . + . ID=gene-CCO40_RS11200;Name=CCO40_RS11200;end_range=2335890,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS11200;old_locus_tag=CCO40_11200;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 2335101 2335890 . + 0 ID=cds-CCO40_RS11200;Parent=gene-CCO40_RS11200;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2335890,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001567368.1;locus_tag=CCO40_RS11200;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 2335892 2336800 . - . ID=gene-CCO40_RS11205;Name=CCO40_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11205;old_locus_tag=CCO40_11205 NZ_CP075116.1 Protein Homology CDS 2335892 2336800 . - 0 ID=cds-WP_077912641.1;Parent=gene-CCO40_RS11205;Dbxref=GenBank:WP_077912641.1;Name=WP_077912641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460512.1;locus_tag=CCO40_RS11205;product=hypothetical protein;protein_id=WP_077912641.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2336951 2337283 . - . ID=gene-CCO40_RS11210;Name=CCO40_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11210;old_locus_tag=CCO40_11210 NZ_CP075116.1 Protein Homology CDS 2336951 2337283 . - 0 ID=cds-WP_000253155.1;Parent=gene-CCO40_RS11210;Dbxref=GenBank:WP_000253155.1;Name=WP_000253155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253166.1;locus_tag=CCO40_RS11210;product=DUF1493 family protein;protein_id=WP_000253155.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 2337277 2337375 . - . ID=gene-CCO40_RS22695;Name=CCO40_RS22695;end_range=2337375,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22695;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 2337277 2337375 . - 0 ID=cds-CCO40_RS22695;Parent=gene-CCO40_RS22695;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2337375,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_090138499.1;locus_tag=CCO40_RS22695;partial=true;product=STM2901 family protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 2337640 2337888 . + . ID=gene-CCO40_RS11220;Name=CCO40_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11220;old_locus_tag=CCO40_11220 NZ_CP075116.1 Protein Homology CDS 2337640 2337888 . + 0 ID=cds-WP_000885424.1;Parent=gene-CCO40_RS11220;Dbxref=GenBank:WP_000885424.1;Name=WP_000885424.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460511.1;locus_tag=CCO40_RS11220;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_000885424.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2337878 2338162 . + . ID=gene-CCO40_RS11225;Name=CCO40_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11225;old_locus_tag=CCO40_11225 NZ_CP075116.1 Protein Homology CDS 2337878 2338162 . + 0 ID=cds-WP_000221345.1;Parent=gene-CCO40_RS11225;Dbxref=GenBank:WP_000221345.1;Name=WP_000221345.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460510.1;locus_tag=CCO40_RS11225;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000221345.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2338333 2338722 . + . ID=gene-CCO40_RS11230;Name=CCO40_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11230;old_locus_tag=CCO40_11230 NZ_CP075116.1 Protein Homology CDS 2338333 2338722 . + 0 ID=cds-WP_094889288.1;Parent=gene-CCO40_RS11230;Dbxref=GenBank:WP_094889288.1;Name=WP_094889288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460509.1;locus_tag=CCO40_RS11230;product=RidA family protein;protein_id=WP_094889288.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2338780 2339853 . - . ID=gene-CCO40_RS11235;Name=CCO40_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11235;old_locus_tag=CCO40_11235 NZ_CP075116.1 Protein Homology CDS 2338780 2339853 . - 0 ID=cds-WP_094889258.1;Parent=gene-CCO40_RS11235;Dbxref=GenBank:WP_094889258.1;Name=WP_094889258.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527732.1;locus_tag=CCO40_RS11235;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=WP_094889258.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2340046 2340534 . - . ID=gene-CCO40_RS11240;Name=CCO40_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11240;old_locus_tag=CCO40_11240 NZ_CP075116.1 Protein Homology CDS 2340046 2340534 . - 0 ID=cds-WP_001293634.1;Parent=gene-CCO40_RS11240;Dbxref=GenBank:WP_001293634.1;Name=WP_001293634.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460507.1;locus_tag=CCO40_RS11240;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_001293634.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2340579 2342087 . + . ID=gene-CCO40_RS11245;Name=CCO40_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11245;old_locus_tag=CCO40_11245 NZ_CP075116.1 Protein Homology CDS 2340579 2342087 . + 0 ID=cds-WP_094889257.1;Parent=gene-CCO40_RS11245;Dbxref=GenBank:WP_094889257.1;Name=WP_094889257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460506.1;locus_tag=CCO40_RS11245;product=FAD-dependent oxidoreductase;protein_id=WP_094889257.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2342077 2343318 . + . ID=gene-CCO40_RS11250;Name=CCO40_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11250;old_locus_tag=CCO40_11250 NZ_CP075116.1 Protein Homology CDS 2342077 2343318 . + 0 ID=cds-WP_094889256.1;Parent=gene-CCO40_RS11250;Dbxref=GenBank:WP_094889256.1;Name=WP_094889256.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460505.1;locus_tag=CCO40_RS11250;product=MFS transporter;protein_id=WP_094889256.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2343388 2344944 . + . ID=gene-CCO40_RS11255;Name=CCO40_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11255;old_locus_tag=CCO40_11255 NZ_CP075116.1 Protein Homology CDS 2343388 2344944 . + 0 ID=cds-WP_094889255.1;Parent=gene-CCO40_RS11255;Dbxref=GenBank:WP_094889255.1;Name=WP_094889255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460504.1;locus_tag=CCO40_RS11255;product=PhoPQ-activated pathogenicity-related family protein;protein_id=WP_094889255.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2345121 2346407 . + . ID=gene-CCO40_RS11260;Name=CCO40_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11260;old_locus_tag=CCO40_11260 NZ_CP075116.1 Protein Homology CDS 2345121 2346407 . + 0 ID=cds-WP_000824227.1;Parent=gene-CCO40_RS11260;Dbxref=GenBank:WP_000824227.1;Name=WP_000824227.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460503.1;locus_tag=CCO40_RS11260;product=MFS transporter;protein_id=WP_000824227.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2346382 2347407 . + . ID=gene-CCO40_RS11265;Name=CCO40_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11265;old_locus_tag=CCO40_11265 NZ_CP075116.1 Protein Homology CDS 2346382 2347407 . + 0 ID=cds-WP_000864924.1;Parent=gene-CCO40_RS11265;Dbxref=GenBank:WP_000864924.1;Name=WP_000864924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460502.1;locus_tag=CCO40_RS11265;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_000864924.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2347466 2348257 . - . ID=gene-CCO40_RS11270;Name=CCO40_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11270;old_locus_tag=CCO40_11270 NZ_CP075116.1 Protein Homology CDS 2347466 2348257 . - 0 ID=cds-WP_000388417.1;Parent=gene-CCO40_RS11270;Dbxref=GenBank:WP_000388417.1;Name=WP_000388417.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460501.1;locus_tag=CCO40_RS11270;product=FadR/GntR family transcriptional regulator;protein_id=WP_000388417.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2348303 2349394 . - . ID=gene-CCO40_RS11275;Name=CCO40_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11275;old_locus_tag=CCO40_11275 NZ_CP075116.1 Protein Homology CDS 2348303 2349394 . - 0 ID=cds-WP_000976500.1;Parent=gene-CCO40_RS11275;Dbxref=GenBank:WP_000976500.1;Name=WP_000976500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460500.1;locus_tag=CCO40_RS11275;product=choloylglycine hydrolase family protein;protein_id=WP_000976500.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2349823 2350926 . + . ID=gene-CCO40_RS11280;Name=CCO40_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11280;old_locus_tag=CCO40_11280 NZ_CP075116.1 Protein Homology CDS 2349823 2350926 . + 0 ID=cds-WP_001194448.1;Parent=gene-CCO40_RS11280;Dbxref=GenBank:WP_001194448.1;Name=WP_001194448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460499.1;locus_tag=CCO40_RS11280;product=hydrogenase small subunit;protein_id=WP_001194448.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2350929 2352731 . + . ID=gene-CCO40_RS11285;Name=CCO40_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11285;old_locus_tag=CCO40_11285 NZ_CP075116.1 Protein Homology CDS 2350929 2352731 . + 0 ID=cds-WP_000331200.1;Parent=gene-CCO40_RS11285;Dbxref=GenBank:WP_000331200.1;Name=WP_000331200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=CCO40_RS11285;product=nickel-dependent hydrogenase large subunit;protein_id=WP_000331200.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2352682 2353425 . + . ID=gene-CCO40_RS11290;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=CCO40_RS11290;old_locus_tag=CCO40_11290 NZ_CP075116.1 Protein Homology CDS 2352682 2353425 . + 0 ID=cds-WP_000924456.1;Parent=gene-CCO40_RS11290;Dbxref=GenBank:WP_000924456.1;Name=WP_000924456.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=CCO40_RS11290;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=WP_000924456.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2353431 2354039 . + . ID=gene-CCO40_RS11295;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=CCO40_RS11295;old_locus_tag=CCO40_11295 NZ_CP075116.1 Protein Homology CDS 2353431 2354039 . + 0 ID=cds-WP_000852665.1;Parent=gene-CCO40_RS11295;Dbxref=GenBank:WP_000852665.1;Name=WP_000852665.1;Ontology_term=GO:0051604,GO:0004190,GO:0046872,GO:0009375;gbkey=CDS;gene=hybD;go_component=ferredoxin hydrogenase complex|0009375||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA,metal ion binding|0046872||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460496.1;locus_tag=CCO40_RS11295;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_000852665.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2354039 2354338 . + . ID=gene-CCO40_RS11300;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=CCO40_RS11300;old_locus_tag=CCO40_11300 NZ_CP075116.1 Protein Homology CDS 2354039 2354338 . + 0 ID=cds-WP_000334904.1;Parent=gene-CCO40_RS11300;Dbxref=GenBank:WP_000334904.1;Name=WP_000334904.1;Ontology_term=GO:0065003,GO:0016530;gbkey=CDS;gene=hypC;go_function=metallochaperone activity|0016530||IEA;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460495.1;locus_tag=CCO40_RS11300;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_000334904.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2354335 2354745 . + . ID=gene-CCO40_RS11305;Name=CCO40_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11305;old_locus_tag=CCO40_11305 NZ_CP075116.1 Protein Homology CDS 2354335 2354745 . + 0 ID=cds-WP_094889254.1;Parent=gene-CCO40_RS11305;Dbxref=GenBank:WP_094889254.1;Name=WP_094889254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460494.1;locus_tag=CCO40_RS11305;product=thioredoxin domain-containing protein;protein_id=WP_094889254.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2354763 2355824 . + . ID=gene-CCO40_RS11310;Name=CCO40_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11310;old_locus_tag=CCO40_11310 NZ_CP075116.1 Protein Homology CDS 2354763 2355824 . + 0 ID=cds-WP_023204286.1;Parent=gene-CCO40_RS11310;Dbxref=GenBank:WP_023204286.1;Name=WP_023204286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460493.1;locus_tag=CCO40_RS11310;product=hydrogenase expression/formation C-terminal domain-containing protein;protein_id=WP_023204286.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2355812 2356699 . + . ID=gene-CCO40_RS11315;Name=CCO40_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11315;old_locus_tag=CCO40_11315 NZ_CP075116.1 Protein Homology CDS 2355812 2356699 . + 0 ID=cds-WP_001189394.1;Parent=gene-CCO40_RS11315;Dbxref=GenBank:WP_001189394.1;Name=WP_001189394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460492.1;locus_tag=CCO40_RS11315;product=ATP/GTP-binding protein;protein_id=WP_001189394.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2356712 2357053 . + . ID=gene-CCO40_RS11320;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=CCO40_RS11320;old_locus_tag=CCO40_11320 NZ_CP075116.1 Protein Homology CDS 2356712 2357053 . + 0 ID=cds-WP_000544776.1;Parent=gene-CCO40_RS11320;Dbxref=GenBank:WP_000544776.1;Name=WP_000544776.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460491.1;locus_tag=CCO40_RS11320;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544776.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2357183 2358301 . - . ID=gene-CCO40_RS11325;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=CCO40_RS11325;old_locus_tag=CCO40_11325 NZ_CP075116.1 Protein Homology CDS 2357183 2358301 . - 0 ID=cds-WP_094889253.1;Parent=gene-CCO40_RS11325;Dbxref=GenBank:WP_094889253.1;Name=WP_094889253.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=CCO40_RS11325;product=porin OmpC;protein_id=WP_094889253.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2359018 2359560 . + . ID=gene-CCO40_RS11330;Name=CCO40_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11330;old_locus_tag=CCO40_11330 NZ_CP075116.1 Protein Homology CDS 2359018 2359560 . + 0 ID=cds-WP_000513116.1;Parent=gene-CCO40_RS11330;Dbxref=GenBank:WP_000513116.1;Name=WP_000513116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460488.1;locus_tag=CCO40_RS11330;product=YybH family protein;protein_id=WP_000513116.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2359616 2360530 . - . ID=gene-CCO40_RS11335;Name=CCO40_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11335;old_locus_tag=CCO40_11335 NZ_CP075116.1 Protein Homology CDS 2359616 2360530 . - 0 ID=cds-WP_001675544.1;Parent=gene-CCO40_RS11335;Dbxref=GenBank:WP_001675544.1;Name=WP_001675544.1;Ontology_term=GO:0005254;gbkey=CDS;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=CCO40_RS11335;product=bestrophin family protein;protein_id=WP_001675544.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2360787 2361146 . - . ID=gene-CCO40_RS11340;Name=CCO40_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11340;old_locus_tag=CCO40_11340 NZ_CP075116.1 Protein Homology CDS 2360787 2361146 . - 0 ID=cds-WP_000992451.1;Parent=gene-CCO40_RS11340;Dbxref=GenBank:WP_000992451.1;Name=WP_000992451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460486.1;locus_tag=CCO40_RS11340;product=DUF4186 domain-containing protein;protein_id=WP_000992451.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2361146 2362072 . - . ID=gene-CCO40_RS11345;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=CCO40_RS11345;old_locus_tag=CCO40_11345 NZ_CP075116.1 Protein Homology CDS 2361146 2362072 . - 0 ID=cds-WP_000090081.1;Parent=gene-CCO40_RS11345;Dbxref=GenBank:WP_000090081.1;Name=WP_000090081.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=L-glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=CCO40_RS11345;product=glutaminase B;protein_id=WP_000090081.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2362145 2363533 . - . ID=gene-CCO40_RS11350;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=CCO40_RS11350;old_locus_tag=CCO40_11350 NZ_CP075116.1 Protein Homology CDS 2362145 2363533 . - 0 ID=cds-WP_000178409.1;Parent=gene-CCO40_RS11350;Dbxref=GenBank:WP_000178409.1;Name=WP_000178409.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=CCO40_RS11350;product=succinate-semialdehyde dehydrogenase;protein_id=WP_000178409.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2363636 2364508 . + . ID=gene-CCO40_RS11355;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=CCO40_RS11355;old_locus_tag=CCO40_11355 NZ_CP075116.1 Protein Homology CDS 2363636 2364508 . + 0 ID=cds-WP_001649498.1;Parent=gene-CCO40_RS11355;Dbxref=GenBank:WP_001649498.1;Name=WP_001649498.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460483.1;locus_tag=CCO40_RS11355;product=putrescine utilization regulator PtrR;protein_id=WP_001649498.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2364624 2365814 . + . ID=gene-CCO40_RS11360;Name=CCO40_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11360;old_locus_tag=CCO40_11360 NZ_CP075116.1 Protein Homology CDS 2364624 2365814 . + 0 ID=cds-WP_000154617.1;Parent=gene-CCO40_RS11360;Dbxref=GenBank:WP_000154617.1;Name=WP_000154617.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460482.1;locus_tag=CCO40_RS11360;product=sugar transporter;protein_id=WP_000154617.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2365861 2366526 . - . ID=gene-CCO40_RS11365;Name=CCO40_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11365;old_locus_tag=CCO40_11365 NZ_CP075116.1 Protein Homology CDS 2365861 2366526 . - 0 ID=cds-WP_000968968.1;Parent=gene-CCO40_RS11365;Dbxref=GenBank:WP_000968968.1;Name=WP_000968968.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460481.1;locus_tag=CCO40_RS11365;product=MarC family NAAT transporter;protein_id=WP_000968968.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2366785 2367219 . + . ID=gene-CCO40_RS11370;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=CCO40_RS11370;old_locus_tag=CCO40_11370 NZ_CP075116.1 Protein Homology CDS 2366785 2367219 . + 0 ID=cds-WP_000843434.1;Parent=gene-CCO40_RS11370;Dbxref=GenBank:WP_000843434.1;Name=WP_000843434.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=CCO40_RS11370;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_000843434.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2367239 2367622 . + . ID=gene-CCO40_RS11375;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=CCO40_RS11375;old_locus_tag=CCO40_11375 NZ_CP075116.1 Protein Homology CDS 2367239 2367622 . + 0 ID=cds-WP_000091194.1;Parent=gene-CCO40_RS11375;Dbxref=GenBank:WP_000091194.1;Name=WP_000091194.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091194.1;locus_tag=CCO40_RS11375;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091194.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2367651 2367866 . + . ID=gene-CCO40_RS11380;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=CCO40_RS11380;old_locus_tag=CCO40_11380 NZ_CP075116.1 Protein Homology CDS 2367651 2367866 . + 0 ID=cds-WP_045341049.1;Parent=gene-CCO40_RS11380;Dbxref=GenBank:WP_045341049.1;Name=WP_045341049.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460478.1;locus_tag=CCO40_RS11380;product=multiple antibiotic resistance protein MarB;protein_id=WP_045341049.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2367985 2368887 . - . ID=gene-CCO40_RS11385;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=CCO40_RS11385;old_locus_tag=CCO40_11385 NZ_CP075116.1 Protein Homology CDS 2367985 2368887 . - 0 ID=cds-WP_000987750.1;Parent=gene-CCO40_RS11385;Dbxref=GenBank:WP_000987750.1;Name=WP_000987750.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460477.1;locus_tag=CCO40_RS11385;product=O-acetylserine/cysteine exporter;protein_id=WP_000987750.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2369115 2370302 . + . ID=gene-CCO40_RS11390;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=CCO40_RS11390;old_locus_tag=CCO40_11390 NZ_CP075116.1 Protein Homology CDS 2369115 2370302 . + 0 ID=cds-WP_001068056.1;Parent=gene-CCO40_RS11390;Dbxref=GenBank:WP_001068056.1;Name=WP_001068056.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460476.1;locus_tag=CCO40_RS11390;product=efflux MFS transporter YdeE;protein_id=WP_001068056.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2370550 2370645 . + . ID=gene-CCO40_RS11395;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=CCO40_RS11395;old_locus_tag=CCO40_11395 NZ_CP075116.1 Protein Homology CDS 2370550 2370645 . + 0 ID=cds-WP_000901531.1;Parent=gene-CCO40_RS11395;Dbxref=GenBank:WP_000901531.1;Name=WP_000901531.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=CCO40_RS11395;product=protein MgtS;protein_id=WP_000901531.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2370991 2371383 . - . ID=gene-CCO40_RS11400;Name=CCO40_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11400;old_locus_tag=CCO40_11400 NZ_CP075116.1 Protein Homology CDS 2370991 2371383 . - 0 ID=cds-WP_000776348.1;Parent=gene-CCO40_RS11400;Dbxref=GenBank:WP_000776348.1;Name=WP_000776348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=CCO40_RS11400;product=YdeI family stress tolerance OB fold protein;protein_id=WP_000776348.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2371810 2372340 . + . ID=gene-CCO40_RS11405;Name=CCO40_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11405;old_locus_tag=CCO40_11405 NZ_CP075116.1 Protein Homology CDS 2371810 2372340 . + 0 ID=cds-WP_094889252.1;Parent=gene-CCO40_RS11405;Dbxref=GenBank:WP_094889252.1;Name=WP_094889252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001235048.1;locus_tag=CCO40_RS11405;product=2-oxo-tetronate isomerase;protein_id=WP_094889252.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2372454 2372636 . - . ID=gene-CCO40_RS11410;Name=CCO40_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11410;old_locus_tag=CCO40_11410 NZ_CP075116.1 Protein Homology CDS 2372454 2372636 . - 0 ID=cds-WP_000807642.1;Parent=gene-CCO40_RS11410;Dbxref=GenBank:WP_000807642.1;Name=WP_000807642.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460473.1;locus_tag=CCO40_RS11410;product=con-10 family general stress protein;protein_id=WP_000807642.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2372981 2375023 . - . ID=gene-CCO40_RS11415;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=CCO40_RS11415;old_locus_tag=CCO40_11415 NZ_CP075116.1 Protein Homology CDS 2372981 2375023 . - 0 ID=cds-WP_045717633.1;Parent=gene-CCO40_RS11415;Dbxref=GenBank:WP_045717633.1;Name=WP_045717633.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=CCO40_RS11415;product=peptidyl-dipeptidase Dcp;protein_id=WP_045717633.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2375162 2375908 . + . ID=gene-CCO40_RS11420;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=CCO40_RS11420;old_locus_tag=CCO40_11420 NZ_CP075116.1 Protein Homology CDS 2375162 2375908 . + 0 ID=cds-WP_000636564.1;Parent=gene-CCO40_RS11420;Dbxref=GenBank:WP_000636564.1;Name=WP_000636564.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460471.1;locus_tag=CCO40_RS11420;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_000636564.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2376038 2376724 . + . ID=gene-CCO40_RS11425;Name=CCO40_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11425;old_locus_tag=CCO40_11425 NZ_CP075116.1 Protein Homology CDS 2376038 2376724 . + 0 ID=cds-WP_000215563.1;Parent=gene-CCO40_RS11425;Dbxref=GenBank:WP_000215563.1;Name=WP_000215563.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460470.1;locus_tag=CCO40_RS11425;product=GntR family transcriptional regulator;protein_id=WP_000215563.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2376905 2377108 . + . ID=gene-CCO40_RS11430;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=CCO40_RS11430;old_locus_tag=CCO40_11430 NZ_CP075116.1 Protein Homology CDS 2376905 2377108 . + 0 ID=cds-WP_000989267.1;Parent=gene-CCO40_RS11430;Dbxref=GenBank:WP_000989267.1;Name=WP_000989267.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460469.1;locus_tag=CCO40_RS11430;product=putative selenium delivery protein YdfZ;protein_id=WP_000989267.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2377175 2378641 . - . ID=gene-CCO40_RS11435;Name=CCO40_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11435;old_locus_tag=CCO40_11435 NZ_CP075116.1 Protein Homology CDS 2377175 2378641 . - 0 ID=cds-WP_045717632.1;Parent=gene-CCO40_RS11435;Dbxref=GenBank:WP_045717632.1;Name=WP_045717632.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460468.1;locus_tag=CCO40_RS11435;product=mannitol dehydrogenase family protein;protein_id=WP_045717632.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2378785 2380164 . - . ID=gene-CCO40_RS11440;Name=CCO40_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11440;old_locus_tag=CCO40_11440 NZ_CP075116.1 Protein Homology CDS 2378785 2380164 . - 0 ID=cds-WP_000192118.1;Parent=gene-CCO40_RS11440;Dbxref=GenBank:WP_000192118.1;Name=WP_000192118.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210164.1;locus_tag=CCO40_RS11440;product=MFS transporter;protein_id=WP_000192118.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2380218 2381237 . - . ID=gene-CCO40_RS11445;Name=CCO40_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11445;old_locus_tag=CCO40_11445 NZ_CP075116.1 Protein Homology CDS 2380218 2381237 . - 0 ID=cds-WP_000836494.1;Parent=gene-CCO40_RS11445;Dbxref=GenBank:WP_000836494.1;Name=WP_000836494.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=CCO40_RS11445;product=Zn-dependent oxidoreductase;protein_id=WP_000836494.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2381248 2382462 . - . ID=gene-CCO40_RS11450;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=CCO40_RS11450;old_locus_tag=CCO40_11450 NZ_CP075116.1 Protein Homology CDS 2381248 2382462 . - 0 ID=cds-WP_000706267.1;Parent=gene-CCO40_RS11450;Dbxref=GenBank:WP_000706267.1;Name=WP_000706267.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=CCO40_RS11450;product=starvation-sensing protein RspA;protein_id=WP_000706267.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2382584 2382910 . - . ID=gene-CCO40_RS11455;Name=CCO40_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11455;old_locus_tag=CCO40_11455 NZ_CP075116.1 Protein Homology CDS 2382584 2382910 . - 0 ID=cds-WP_000921389.1;Parent=gene-CCO40_RS11455;Dbxref=GenBank:WP_000921389.1;Name=WP_000921389.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460464.1;locus_tag=CCO40_RS11455;product=YnfA family protein;protein_id=WP_000921389.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2383063 2383404 . + . ID=gene-CCO40_RS11460;Name=CCO40_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11460;old_locus_tag=CCO40_11460 NZ_CP075116.1 Protein Homology CDS 2383063 2383404 . + 0 ID=cds-WP_001066440.1;Parent=gene-CCO40_RS11460;Dbxref=GenBank:WP_001066440.1;Name=WP_001066440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460463.1;locus_tag=CCO40_RS11460;product=DUF1283 family protein;protein_id=WP_001066440.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2383440 2384000 . + . ID=gene-CCO40_RS11465;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=CCO40_RS11465;old_locus_tag=CCO40_11465 NZ_CP075116.1 Protein Homology CDS 2383440 2384000 . + 0 ID=cds-WP_000199997.1;Parent=gene-CCO40_RS11465;Dbxref=GenBank:WP_000199997.1;Name=WP_000199997.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460462.1;locus_tag=CCO40_RS11465;product=spermidine N1-acetyltransferase;protein_id=WP_000199997.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2384041 2384751 . - . ID=gene-CCO40_RS11470;Name=CCO40_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11470;old_locus_tag=CCO40_11470 NZ_CP075116.1 Protein Homology CDS 2384041 2384751 . - 0 ID=cds-WP_045718011.1;Parent=gene-CCO40_RS11470;Dbxref=GenBank:WP_045718011.1;Name=WP_045718011.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465701.1;locus_tag=CCO40_RS11470;product=YnfC family lipoprotein;protein_id=WP_045718011.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2384855 2385163 . + . ID=gene-CCO40_RS11475;Name=CCO40_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11475;old_locus_tag=CCO40_11475 NZ_CP075116.1 Protein Homology CDS 2384855 2385163 . + 0 ID=cds-WP_000975516.1;Parent=gene-CCO40_RS11475;Dbxref=GenBank:WP_000975516.1;Name=WP_000975516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=CCO40_RS11475;product=DUF1161 domain-containing protein;protein_id=WP_000975516.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2385320 2387758 . + . ID=gene-CCO40_RS11480;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=CCO40_RS11480;old_locus_tag=CCO40_11480 NZ_CP075116.1 Protein Homology CDS 2385320 2387758 . + 0 ID=cds-WP_094889251.1;Parent=gene-CCO40_RS11480;Dbxref=GenBank:WP_094889251.1;Name=WP_094889251.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006788576.1;locus_tag=CCO40_RS11480;product=selenate/tellurate reductase subunit YnfE;protein_id=WP_094889251.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2387857 2390292 . + . ID=gene-CCO40_RS11485;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=CCO40_RS11485;old_locus_tag=CCO40_11485 NZ_CP075116.1 Protein Homology CDS 2387857 2390292 . + 0 ID=cds-WP_080176765.1;Parent=gene-CCO40_RS11485;Dbxref=GenBank:WP_080176765.1;Name=WP_080176765.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=CCO40_RS11485;product=selenate/tellurate reductase subunit YnfF;protein_id=WP_080176765.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2390303 2390920 . + . ID=gene-CCO40_RS11490;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=CCO40_RS11490;old_locus_tag=CCO40_11490 NZ_CP075116.1 Protein Homology CDS 2390303 2390920 . + 0 ID=cds-WP_000213069.1;Parent=gene-CCO40_RS11490;Dbxref=GenBank:WP_000213069.1;Name=WP_000213069.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=CCO40_RS11490;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213069.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2390922 2391779 . + . ID=gene-CCO40_RS11495;Name=CCO40_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11495;old_locus_tag=CCO40_11495 NZ_CP075116.1 Protein Homology CDS 2390922 2391779 . + 0 ID=cds-WP_000534693.1;Parent=gene-CCO40_RS11495;Dbxref=GenBank:WP_000534693.1;Name=WP_000534693.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=CCO40_RS11495;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000534693.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2391822 2392436 . + . ID=gene-CCO40_RS11500;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=CCO40_RS11500;old_locus_tag=CCO40_11500 NZ_CP075116.1 Protein Homology CDS 2391822 2392436 . + 0 ID=cds-WP_000206565.1;Parent=gene-CCO40_RS11500;Dbxref=GenBank:WP_000206565.1;Name=WP_000206565.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460455.1;locus_tag=CCO40_RS11500;product=Tat proofreading chaperone DmsD;protein_id=WP_000206565.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2392741 2393451 . + . ID=gene-CCO40_RS11505;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=CCO40_RS11505;old_locus_tag=CCO40_11505 NZ_CP075116.1 Protein Homology CDS 2392741 2393451 . + 0 ID=cds-WP_000557304.1;Parent=gene-CCO40_RS11505;Dbxref=GenBank:WP_000557304.1;Name=WP_000557304.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460454.1;locus_tag=CCO40_RS11505;product=osmoprotectant ABC transporter permease OsmY;protein_id=WP_000557304.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2393480 2394382 . + . ID=gene-CCO40_RS11510;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=CCO40_RS11510;old_locus_tag=CCO40_11510 NZ_CP075116.1 Protein Homology CDS 2393480 2394382 . + 0 ID=cds-WP_001211193.1;Parent=gene-CCO40_RS11510;Dbxref=GenBank:WP_001211193.1;Name=WP_001211193.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=CCO40_RS11510;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=WP_001211193.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2394392 2395039 . + . ID=gene-CCO40_RS11515;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=CCO40_RS11515;old_locus_tag=CCO40_11515 NZ_CP075116.1 Protein Homology CDS 2394392 2395039 . + 0 ID=cds-WP_000379677.1;Parent=gene-CCO40_RS11515;Dbxref=GenBank:WP_000379677.1;Name=WP_000379677.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460452.1;locus_tag=CCO40_RS11515;product=osmoprotectant ABC transporter permease OsmW;protein_id=WP_000379677.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2395039 2396187 . + . ID=gene-CCO40_RS11520;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=CCO40_RS11520;old_locus_tag=CCO40_11520 NZ_CP075116.1 Protein Homology CDS 2395039 2396187 . + 0 ID=cds-WP_000593094.1;Parent=gene-CCO40_RS11520;Dbxref=GenBank:WP_000593094.1;Name=WP_000593094.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460451.1;locus_tag=CCO40_RS11520;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=WP_000593094.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2396323 2397612 . + . ID=gene-CCO40_RS11525;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=CCO40_RS11525;old_locus_tag=CCO40_11525 NZ_CP075116.1 Protein Homology CDS 2396323 2397612 . + 0 ID=cds-WP_000554907.1;Parent=gene-CCO40_RS11525;Dbxref=GenBank:WP_000554907.1;Name=WP_000554907.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460450.3;locus_tag=CCO40_RS11525;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_000554907.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2397568 2398263 . - . ID=gene-CCO40_RS11530;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=CCO40_RS11530;old_locus_tag=CCO40_11530 NZ_CP075116.1 Protein Homology CDS 2397568 2398263 . - 0 ID=cds-WP_000919206.1;Parent=gene-CCO40_RS11530;Dbxref=GenBank:WP_000919206.1;Name=WP_000919206.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=CCO40_RS11530;product=dethiobiotin synthase;protein_id=WP_000919206.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2398389 2399609 . - . ID=gene-CCO40_RS11535;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=CCO40_RS11535;old_locus_tag=CCO40_11535 NZ_CP075116.1 Protein Homology CDS 2398389 2399609 . - 0 ID=cds-WP_000225095.1;Parent=gene-CCO40_RS11535;Dbxref=GenBank:WP_000225095.1;Name=WP_000225095.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=CCO40_RS11535;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_000225095.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2399737 2400636 . - . ID=gene-CCO40_RS11540;Name=ynfL;gbkey=Gene;gene=ynfL;gene_biotype=protein_coding;gene_synonym=sxtR(Kp);locus_tag=CCO40_RS11540;old_locus_tag=CCO40_11540 NZ_CP075116.1 Protein Homology CDS 2399737 2400636 . - 0 ID=cds-WP_001019577.1;Parent=gene-CCO40_RS11540;Dbxref=GenBank:WP_001019577.1;Name=WP_001019577.1;gbkey=CDS;gene=ynfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=CCO40_RS11540;product=multidrug efflux transcriptional activator YnfL/SxtR(Kp);protein_id=WP_001019577.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2400756 2402009 . + . ID=gene-CCO40_RS11545;Name=ynfM;gbkey=Gene;gene=ynfM;gene_biotype=protein_coding;gene_synonym=sxtP(Kp);locus_tag=CCO40_RS11545;old_locus_tag=CCO40_11545 NZ_CP075116.1 Protein Homology CDS 2400756 2402009 . + 0 ID=cds-WP_000091796.1;Parent=gene-CCO40_RS11545;Dbxref=GenBank:WP_000091796.1;Name=WP_000091796.1;gbkey=CDS;gene=ynfM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460446.1;locus_tag=CCO40_RS11545;product=multidrug efflux MFS transporter YnfM/SxtP(Kp);protein_id=WP_000091796.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2402076 2402168 . - . ID=gene-CCO40_RS11550;Name=CCO40_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11550;old_locus_tag=CCO40_11550 NZ_CP075116.1 Protein Homology CDS 2402076 2402168 . - 0 ID=cds-WP_220569200.1;Parent=gene-CCO40_RS11550;Dbxref=GenBank:WP_220569200.1;Name=WP_220569200.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=CCO40_RS11550;product=KPN_01571 family protein;protein_id=WP_220569200.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2402404 2402655 . + . ID=gene-CCO40_RS11555;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=CCO40_RS11555;old_locus_tag=CCO40_11555 NZ_CP075116.1 Protein Homology CDS 2402404 2402655 . + 0 ID=cds-WP_000756315.1;Parent=gene-CCO40_RS11555;Dbxref=GenBank:WP_000756315.1;Name=WP_000756315.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001698353.1;locus_tag=CCO40_RS11555;product=acid resistance repetitive basic protein Asr;protein_id=WP_000756315.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2402744 2402824 . + . ID=gene-CCO40_RS22780;Name=ydgU;gbkey=Gene;gene=ydgU;gene_biotype=protein_coding;locus_tag=CCO40_RS22780 NZ_CP075116.1 Protein Homology CDS 2402744 2402824 . + 0 ID=cds-WP_086011712.1;Parent=gene-CCO40_RS22780;Dbxref=GenBank:WP_086011712.1;Name=WP_086011712.1;gbkey=CDS;gene=ydgU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_276295187.1;locus_tag=CCO40_RS22780;product=small membrane protein YdgU;protein_id=WP_086011712.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2402924 2403745 . + . ID=gene-CCO40_RS11560;Name=CCO40_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11560;old_locus_tag=CCO40_11560 NZ_CP075116.1 Protein Homology CDS 2402924 2403745 . + 0 ID=cds-WP_000549641.1;Parent=gene-CCO40_RS11560;Dbxref=GenBank:WP_000549641.1;Name=WP_000549641.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460444.1;locus_tag=CCO40_RS11560;product=trypsin-like serine peptidase;protein_id=WP_000549641.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2403780 2404109 . - . ID=gene-CCO40_RS11565;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=CCO40_RS11565;old_locus_tag=CCO40_11565 NZ_CP075116.1 Protein Homology CDS 2403780 2404109 . - 0 ID=cds-WP_001183821.1;Parent=gene-CCO40_RS11565;Dbxref=GenBank:WP_001183821.1;Name=WP_001183821.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460443.1;locus_tag=CCO40_RS11565;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_001183821.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2404096 2404458 . - . ID=gene-CCO40_RS11570;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=CCO40_RS11570;old_locus_tag=CCO40_11570 NZ_CP075116.1 Protein Homology CDS 2404096 2404458 . - 0 ID=cds-WP_000500278.1;Parent=gene-CCO40_RS11570;Dbxref=GenBank:WP_000500278.1;Name=WP_000500278.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460442.1;locus_tag=CCO40_RS11570;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_000500278.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2404570 2404740 . - . ID=gene-CCO40_RS22785;Name=CCO40_RS22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22785 NZ_CP075116.1 Protein Homology CDS 2404570 2404740 . - 0 ID=cds-WP_001539987.1;Parent=gene-CCO40_RS22785;Dbxref=GenBank:WP_001539987.1;Name=WP_001539987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=CCO40_RS22785;product=protein YdgV;protein_id=WP_001539987.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2404876 2405910 . + . ID=gene-CCO40_RS11575;Name=CCO40_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11575;old_locus_tag=CCO40_11575 NZ_CP075116.1 Protein Homology CDS 2404876 2405910 . + 0 ID=cds-WP_001118268.1;Parent=gene-CCO40_RS11575;Dbxref=GenBank:WP_001118268.1;Name=WP_001118268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460441.1;locus_tag=CCO40_RS11575;product=AI-2E family transporter;protein_id=WP_001118268.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2406085 2407473 . - . ID=gene-CCO40_RS11580;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=CCO40_RS11580;old_locus_tag=CCO40_11580 NZ_CP075116.1 Protein Homology CDS 2406085 2407473 . - 0 ID=cds-WP_000014056.1;Parent=gene-CCO40_RS11580;Dbxref=GenBank:WP_000014056.1;Name=WP_000014056.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=CCO40_RS11580;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_000014056.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2407484 2409013 . - . ID=gene-CCO40_RS11585;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=CCO40_RS11585;old_locus_tag=CCO40_11585 NZ_CP075116.1 Protein Homology CDS 2407484 2409013 . - 0 ID=cds-WP_001219354.1;Parent=gene-CCO40_RS11585;Dbxref=GenBank:WP_001219354.1;Name=WP_001219354.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460439.1;locus_tag=CCO40_RS11585;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_001219354.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2409540 2410484 . + . ID=gene-CCO40_RS11590;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=CCO40_RS11590;old_locus_tag=CCO40_11590 NZ_CP075116.1 Protein Homology CDS 2409540 2410484 . + 0 ID=cds-WP_000769294.1;Parent=gene-CCO40_RS11590;Dbxref=GenBank:WP_000769294.1;Name=WP_000769294.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=CCO40_RS11590;product=DUF1471 family protein YdgH;protein_id=WP_000769294.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2410783 2412165 . + . ID=gene-CCO40_RS11595;Name=CCO40_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11595;old_locus_tag=CCO40_11595 NZ_CP075116.1 Protein Homology CDS 2410783 2412165 . + 0 ID=cds-WP_000412353.1;Parent=gene-CCO40_RS11595;Dbxref=GenBank:WP_000412353.1;Name=WP_000412353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460437.1;locus_tag=CCO40_RS11595;product=amino acid permease;protein_id=WP_000412353.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2412227 2412562 . - . ID=gene-CCO40_RS11600;Name=CCO40_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11600;old_locus_tag=CCO40_11600 NZ_CP075116.1 Protein Homology CDS 2412227 2412562 . - 0 ID=cds-WP_000524877.1;Parent=gene-CCO40_RS11600;Dbxref=GenBank:WP_000524877.1;Name=WP_000524877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460436.1;locus_tag=CCO40_RS11600;product=GlpM family protein;protein_id=WP_000524877.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2412689 2413420 . + . ID=gene-CCO40_RS11605;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=CCO40_RS11605;old_locus_tag=CCO40_11605 NZ_CP075116.1 Protein Homology CDS 2412689 2413420 . + 0 ID=cds-WP_001080048.1;Parent=gene-CCO40_RS11605;Dbxref=GenBank:WP_001080048.1;Name=WP_001080048.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460435.1;locus_tag=CCO40_RS11605;product=two-component system response regulator RstA;protein_id=WP_001080048.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2413900 2415051 . + . ID=gene-CCO40_RS11610;Name=ompS2;gbkey=Gene;gene=ompS2;gene_biotype=protein_coding;locus_tag=CCO40_RS11610;old_locus_tag=CCO40_11610 NZ_CP075116.1 Protein Homology CDS 2413900 2415051 . + 0 ID=cds-WP_000824341.1;Parent=gene-CCO40_RS11610;Dbxref=GenBank:WP_000824341.1;Name=WP_000824341.1;gbkey=CDS;gene=ompS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460434.1;locus_tag=CCO40_RS11610;product=porin OmpS2;protein_id=WP_000824341.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2415204 2416910 . + . ID=gene-CCO40_RS11615;Name=CCO40_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11615;old_locus_tag=CCO40_11615 NZ_CP075116.1 Protein Homology CDS 2415204 2416910 . + 0 ID=cds-WP_094889223.1;Parent=gene-CCO40_RS11615;Dbxref=GenBank:WP_094889223.1;Name=WP_094889223.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460433.1;locus_tag=CCO40_RS11615;product=amidohydrolase;protein_id=WP_094889223.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2417021 2418322 . + . ID=gene-CCO40_RS11620;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=CCO40_RS11620;old_locus_tag=CCO40_11620 NZ_CP075116.1 Protein Homology CDS 2417021 2418322 . + 0 ID=cds-WP_000732955.1;Parent=gene-CCO40_RS11620;Dbxref=GenBank:WP_000732955.1;Name=WP_000732955.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=CCO40_RS11620;product=two-component system sensor histidine kinase RstB;protein_id=WP_000732955.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2418398 2419327 . + . ID=gene-CCO40_RS11625;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=CCO40_RS11625;old_locus_tag=CCO40_11625 NZ_CP075116.1 Protein Homology CDS 2418398 2419327 . + 0 ID=cds-WP_000092489.1;Parent=gene-CCO40_RS11625;Dbxref=GenBank:WP_000092489.1;Name=WP_000092489.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=CCO40_RS11625;product=DNA replication terminus site-binding protein;protein_id=WP_000092489.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2419324 2420727 . - . ID=gene-CCO40_RS11630;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=CCO40_RS11630;old_locus_tag=CCO40_11630 NZ_CP075116.1 Protein Homology CDS 2419324 2420727 . - 0 ID=cds-WP_000259117.1;Parent=gene-CCO40_RS11630;Dbxref=GenBank:WP_000259117.1;Name=WP_000259117.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460430.1;locus_tag=CCO40_RS11630;product=class II fumarate hydratase;protein_id=WP_000259117.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2420895 2422541 . - . ID=gene-CCO40_RS11635;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=CCO40_RS11635;old_locus_tag=CCO40_11635 NZ_CP075116.1 Protein Homology CDS 2420895 2422541 . - 0 ID=cds-WP_000066607.1;Parent=gene-CCO40_RS11635;Dbxref=GenBank:WP_000066607.1;Name=WP_000066607.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=CCO40_RS11635;product=class I fumarate hydratase;protein_id=WP_000066607.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2422741 2423916 . + . ID=gene-CCO40_RS11640;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=CCO40_RS11640;old_locus_tag=CCO40_11640 NZ_CP075116.1 Protein Homology CDS 2422741 2423916 . + 0 ID=cds-WP_094889222.1;Parent=gene-CCO40_RS11640;Dbxref=GenBank:WP_094889222.1;Name=WP_094889222.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460428.1;locus_tag=CCO40_RS11640;product=mannose-6-phosphate isomerase;protein_id=WP_094889222.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2424019 2425527 . + . ID=gene-CCO40_RS11645;Name=CCO40_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11645;old_locus_tag=CCO40_11645 NZ_CP075116.1 Protein Homology CDS 2424019 2425527 . + 0 ID=cds-WP_094889221.1;Parent=gene-CCO40_RS11645;Dbxref=GenBank:WP_094889221.1;Name=WP_094889221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460427.1;locus_tag=CCO40_RS11645;product=YdgA family protein;protein_id=WP_094889221.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2425585 2426613 . - . ID=gene-CCO40_RS11650;Name=CCO40_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11650;old_locus_tag=CCO40_11650 NZ_CP075116.1 Protein Homology CDS 2425585 2426613 . - 0 ID=cds-WP_000951918.1;Parent=gene-CCO40_RS11650;Dbxref=GenBank:WP_000951918.1;Name=WP_000951918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416137.1;locus_tag=CCO40_RS11650;product=Mal regulon transcriptional regulator MalI;protein_id=WP_000951918.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2426787 2428379 . + . ID=gene-CCO40_RS11655;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=CCO40_RS11655;old_locus_tag=CCO40_11655 NZ_CP075116.1 Protein Homology CDS 2426787 2428379 . + 0 ID=cds-WP_000208903.1;Parent=gene-CCO40_RS11655;Dbxref=GenBank:WP_000208903.1;Name=WP_000208903.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=malX;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310356.1;locus_tag=CCO40_RS11655;product=maltose/glucose-specific PTS transporter subunit IIBC;protein_id=WP_000208903.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2428389 2429561 . + . ID=gene-CCO40_RS11660;Name=CCO40_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11660;old_locus_tag=CCO40_11660 NZ_CP075116.1 Protein Homology CDS 2428389 2429561 . + 0 ID=cds-WP_094889220.1;Parent=gene-CCO40_RS11660;Dbxref=GenBank:WP_094889220.1;Name=WP_094889220.1;Ontology_term=GO:0071265,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310357.1;locus_tag=CCO40_RS11660;product=MalY/PatB family protein;protein_id=WP_094889220.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2429779 2430780 . + . ID=gene-CCO40_RS11665;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=CCO40_RS11665;old_locus_tag=CCO40_11665 NZ_CP075116.1 Protein Homology CDS 2429779 2430780 . + 0 ID=cds-WP_000565571.1;Parent=gene-CCO40_RS11665;Dbxref=GenBank:WP_000565571.1;Name=WP_000565571.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460426.1;locus_tag=CCO40_RS11665;product=adenosine deaminase;protein_id=WP_000565571.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2430855 2431895 . - . ID=gene-CCO40_RS11670;Name=CCO40_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11670;old_locus_tag=CCO40_11670 NZ_CP075116.1 Protein Homology CDS 2430855 2431895 . - 0 ID=cds-WP_000998242.1;Parent=gene-CCO40_RS11670;Dbxref=GenBank:WP_000998242.1;Name=WP_000998242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=CCO40_RS11670;product=oxidoreductase;protein_id=WP_000998242.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2432103 2432228 . + . ID=gene-CCO40_RS11675;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=CCO40_RS11675;old_locus_tag=CCO40_11675 NZ_CP075116.1 Protein Homology CDS 2432103 2432228 . + 0 ID=cds-WP_001708800.1;Parent=gene-CCO40_RS11675;Dbxref=GenBank:WP_001708800.1;Name=WP_001708800.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=CCO40_RS11675;product=division septum protein Blr;protein_id=WP_001708800.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2432529 2432744 . + . ID=gene-CCO40_RS11680;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=CCO40_RS11680;old_locus_tag=CCO40_11680 NZ_CP075116.1 Protein Homology CDS 2432529 2432744 . + 0 ID=cds-WP_000217946.1;Parent=gene-CCO40_RS11680;Dbxref=GenBank:WP_000217946.1;Name=WP_000217946.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=CCO40_RS11680;product=transcription modulator YdgT;protein_id=WP_000217946.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2432833 2433273 . + . ID=gene-CCO40_RS11685;Name=CCO40_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11685;old_locus_tag=CCO40_11685 NZ_CP075116.1 Protein Homology CDS 2432833 2433273 . + 0 ID=cds-WP_000214061.1;Parent=gene-CCO40_RS11685;Dbxref=GenBank:WP_000214061.1;Name=WP_000214061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460423.1;locus_tag=CCO40_RS11685;product=DUF2569 domain-containing protein;protein_id=WP_000214061.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2433350 2433931 . + . ID=gene-CCO40_RS11690;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=CCO40_RS11690;old_locus_tag=CCO40_11690 NZ_CP075116.1 Protein Homology CDS 2433350 2433931 . + 0 ID=cds-WP_000133179.1;Parent=gene-CCO40_RS11690;Dbxref=GenBank:WP_000133179.1;Name=WP_000133179.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=CCO40_RS11690;product=electron transport complex subunit RsxA;protein_id=WP_000133179.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2433931 2434509 . + . ID=gene-CCO40_RS11695;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=CCO40_RS11695;old_locus_tag=CCO40_11695 NZ_CP075116.1 Protein Homology CDS 2433931 2434509 . + 0 ID=cds-WP_001092597.1;Parent=gene-CCO40_RS11695;Dbxref=GenBank:WP_001092597.1;Name=WP_001092597.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460421.1;locus_tag=CCO40_RS11695;product=electron transport complex subunit RsxB;protein_id=WP_001092597.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2434502 2436709 . + . ID=gene-CCO40_RS11700;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=CCO40_RS11700;old_locus_tag=CCO40_11700 NZ_CP075116.1 Protein Homology CDS 2434502 2436709 . + 0 ID=cds-WP_000915657.1;Parent=gene-CCO40_RS11700;Dbxref=GenBank:WP_000915657.1;Name=WP_000915657.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=CCO40_RS11700;product=electron transport complex subunit RsxC;protein_id=WP_000915657.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2436710 2437768 . + . ID=gene-CCO40_RS11705;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=CCO40_RS11705;old_locus_tag=CCO40_11705 NZ_CP075116.1 Protein Homology CDS 2436710 2437768 . + 0 ID=cds-WP_094889219.1;Parent=gene-CCO40_RS11705;Dbxref=GenBank:WP_094889219.1;Name=WP_094889219.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=CCO40_RS11705;product=electron transport complex subunit RsxD;protein_id=WP_094889219.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2437772 2438392 . + . ID=gene-CCO40_RS11710;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=CCO40_RS11710;old_locus_tag=CCO40_11710 NZ_CP075116.1 Protein Homology CDS 2437772 2438392 . + 0 ID=cds-WP_000920822.1;Parent=gene-CCO40_RS11710;Dbxref=GenBank:WP_000920822.1;Name=WP_000920822.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460418.1;locus_tag=CCO40_RS11710;product=electron transport complex subunit RsxG;protein_id=WP_000920822.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2438395 2439087 . + . ID=gene-CCO40_RS11715;Name=CCO40_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11715;old_locus_tag=CCO40_11715 NZ_CP075116.1 Protein Homology CDS 2438395 2439087 . + 0 ID=cds-WP_001289628.1;Parent=gene-CCO40_RS11715;Dbxref=GenBank:WP_001289628.1;Name=WP_001289628.1;Ontology_term=GO:0022900;gbkey=CDS;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460417.1;locus_tag=CCO40_RS11715;product=electron transport complex subunit E;protein_id=WP_001289628.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2439087 2439722 . + . ID=gene-CCO40_RS11720;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=CCO40_RS11720;old_locus_tag=CCO40_11720 NZ_CP075116.1 Protein Homology CDS 2439087 2439722 . + 0 ID=cds-WP_001030318.1;Parent=gene-CCO40_RS11720;Dbxref=GenBank:WP_001030318.1;Name=WP_001030318.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=CCO40_RS11720;product=endonuclease III;protein_id=WP_001030318.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2440324 2441829 . + . ID=gene-CCO40_RS11725;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=CCO40_RS11725;old_locus_tag=CCO40_11725 NZ_CP075116.1 Protein Homology CDS 2440324 2441829 . + 0 ID=cds-WP_000100910.1;Parent=gene-CCO40_RS11725;Dbxref=GenBank:WP_000100910.1;Name=WP_000100910.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460415.1;locus_tag=CCO40_RS11725;product=dipeptide/tripeptide permease DtpA;protein_id=WP_000100910.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2441934 2442539 . + . ID=gene-CCO40_RS11730;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=CCO40_RS11730;old_locus_tag=CCO40_11730 NZ_CP075116.1 Protein Homology CDS 2441934 2442539 . + 0 ID=cds-WP_000765726.1;Parent=gene-CCO40_RS11730;Dbxref=GenBank:WP_000765726.1;Name=WP_000765726.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=CCO40_RS11730;product=glutathione transferase GstA;protein_id=WP_000765726.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2442598 2443458 . - . ID=gene-CCO40_RS11735;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=CCO40_RS11735;old_locus_tag=CCO40_11735 NZ_CP075116.1 Protein Homology CDS 2442598 2443458 . - 0 ID=cds-WP_000789736.1;Parent=gene-CCO40_RS11735;Dbxref=GenBank:WP_000789736.1;Name=WP_000789736.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=CCO40_RS11735;product=pyridoxal kinase PdxY;protein_id=WP_000789736.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2443518 2444792 . - . ID=gene-CCO40_RS11740;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=CCO40_RS11740;old_locus_tag=CCO40_11740 NZ_CP075116.1 Protein Homology CDS 2443518 2444792 . - 0 ID=cds-WP_000168626.1;Parent=gene-CCO40_RS11740;Dbxref=GenBank:WP_000168626.1;Name=WP_000168626.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=CCO40_RS11740;product=tyrosine--tRNA ligase;protein_id=WP_000168626.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2444919 2445575 . - . ID=gene-CCO40_RS11745;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=CCO40_RS11745;old_locus_tag=CCO40_11745 NZ_CP075116.1 Protein Homology CDS 2444919 2445575 . - 0 ID=cds-WP_001282334.1;Parent=gene-CCO40_RS11745;Dbxref=GenBank:WP_001282334.1;Name=WP_001282334.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=CCO40_RS11745;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282334.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2445634 2445963 . - . ID=gene-CCO40_RS11750;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=CCO40_RS11750;old_locus_tag=CCO40_11750 NZ_CP075116.1 Protein Homology CDS 2445634 2445963 . - 0 ID=cds-WP_001132086.1;Parent=gene-CCO40_RS11750;Dbxref=GenBank:WP_001132086.1;Name=WP_001132086.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=CCO40_RS11750;product=C-type lysozyme inhibitor;protein_id=WP_001132086.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2446051 2447172 . - . ID=gene-CCO40_RS11755;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=CCO40_RS11755;old_locus_tag=CCO40_11755 NZ_CP075116.1 Protein Homology CDS 2446051 2447172 . - 0 ID=cds-WP_000835021.1;Parent=gene-CCO40_RS11755;Dbxref=GenBank:WP_000835021.1;Name=WP_000835021.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460409.1;locus_tag=CCO40_RS11755;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_000835021.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2447444 2447911 . + . ID=gene-CCO40_RS11760;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=CCO40_RS11760;old_locus_tag=CCO40_11760 NZ_CP075116.1 Protein Homology CDS 2447444 2447911 . + 0 ID=cds-WP_000597179.1;Parent=gene-CCO40_RS11760;Dbxref=GenBank:WP_000597179.1;Name=WP_000597179.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460408.1;locus_tag=CCO40_RS11760;product=outer membrane lipoprotein SlyB;protein_id=WP_000597179.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2447958 2448398 . - . ID=gene-CCO40_RS11765;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=CCO40_RS11765;old_locus_tag=CCO40_11765 NZ_CP075116.1 Protein Homology CDS 2447958 2448398 . - 0 ID=cds-WP_000764554.1;Parent=gene-CCO40_RS11765;Dbxref=GenBank:WP_000764554.1;Name=WP_000764554.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=CCO40_RS11765;product=transcriptional regulator SlyA;protein_id=WP_000764554.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2448593 2448829 . + . ID=gene-CCO40_RS11770;Name=CCO40_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11770;old_locus_tag=CCO40_11770 NZ_CP075116.1 Protein Homology CDS 2448593 2448829 . + 0 ID=cds-WP_000649755.1;Parent=gene-CCO40_RS11770;Dbxref=GenBank:WP_000649755.1;Name=WP_000649755.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460406.1;locus_tag=CCO40_RS11770;product=DUF1656 domain-containing protein;protein_id=WP_000649755.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2448832 2449692 . + . ID=gene-CCO40_RS11775;Name=CCO40_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11775;old_locus_tag=CCO40_11775 NZ_CP075116.1 Protein Homology CDS 2448832 2449692 . + 0 ID=cds-WP_001531609.1;Parent=gene-CCO40_RS11775;Dbxref=GenBank:WP_001531609.1;Name=WP_001531609.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218841.1;locus_tag=CCO40_RS11775;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_001531609.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2449692 2451731 . + . ID=gene-CCO40_RS11780;Name=CCO40_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11780;old_locus_tag=CCO40_11780 NZ_CP075116.1 Protein Homology CDS 2449692 2451731 . + 0 ID=cds-WP_094889218.1;Parent=gene-CCO40_RS11780;Dbxref=GenBank:WP_094889218.1;Name=WP_094889218.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460404.1;locus_tag=CCO40_RS11780;product=FUSC family protein;protein_id=WP_094889218.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2451707 2452228 . - . ID=gene-CCO40_RS11785;Name=sodC2;gbkey=Gene;gene=sodC2;gene_biotype=protein_coding;gene_synonym=sodCII;locus_tag=CCO40_RS11785;old_locus_tag=CCO40_11785 NZ_CP075116.1 Protein Homology CDS 2451707 2452228 . - 0 ID=cds-WP_000826818.1;Parent=gene-CCO40_RS11785;Dbxref=GenBank:WP_000826818.1;Name=WP_000826818.1;gbkey=CDS;gene=sodC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=CCO40_RS11785;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=WP_000826818.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2452308 2453204 . - . ID=gene-CCO40_RS11790;Name=CCO40_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11790;old_locus_tag=CCO40_11790 NZ_CP075116.1 Protein Homology CDS 2452308 2453204 . - 0 ID=cds-WP_000250724.1;Parent=gene-CCO40_RS11790;Dbxref=GenBank:WP_000250724.1;Name=WP_000250724.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460402.1;locus_tag=CCO40_RS11790;product=aldo/keto reductase;protein_id=WP_000250724.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2453255 2453494 . - . ID=gene-CCO40_RS11795;Name=CCO40_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11795;old_locus_tag=CCO40_11795 NZ_CP075116.1 Protein Homology CDS 2453255 2453494 . - 0 ID=cds-WP_001519323.1;Parent=gene-CCO40_RS11795;Dbxref=GenBank:WP_001519323.1;Name=WP_001519323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460401.1;locus_tag=CCO40_RS11795;product=DUF1289 domain-containing protein;protein_id=WP_001519323.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2453597 2454196 . + . ID=gene-CCO40_RS11800;Name=CCO40_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11800;old_locus_tag=CCO40_11800 NZ_CP075116.1 Protein Homology CDS 2453597 2454196 . + 0 ID=cds-WP_001041823.1;Parent=gene-CCO40_RS11800;Dbxref=GenBank:WP_001041823.1;Name=WP_001041823.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460400.1;locus_tag=CCO40_RS11800;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001041823.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2454255 2455352 . + . ID=gene-CCO40_RS11805;Name=CCO40_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11805;old_locus_tag=CCO40_11805 NZ_CP075116.1 Protein Homology CDS 2454255 2455352 . + 0 ID=cds-WP_000092932.1;Parent=gene-CCO40_RS11805;Dbxref=GenBank:WP_000092932.1;Name=WP_000092932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460399.1;locus_tag=CCO40_RS11805;product=alkene reductase;protein_id=WP_000092932.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2455421 2455828 . + . ID=gene-CCO40_RS11810;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=CCO40_RS11810;old_locus_tag=CCO40_11810 NZ_CP075116.1 Protein Homology CDS 2455421 2455828 . + 0 ID=cds-WP_001237787.1;Parent=gene-CCO40_RS11810;Dbxref=GenBank:WP_001237787.1;Name=WP_001237787.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=CCO40_RS11810;product=lactoylglutathione lyase;protein_id=WP_001237787.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2455929 2456576 . + . ID=gene-CCO40_RS11815;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=CCO40_RS11815;old_locus_tag=CCO40_11815 NZ_CP075116.1 Protein Homology CDS 2455929 2456576 . + 0 ID=cds-WP_001282267.1;Parent=gene-CCO40_RS11815;Dbxref=GenBank:WP_001282267.1;Name=WP_001282267.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460397.1;locus_tag=CCO40_RS11815;product=ribonuclease T;protein_id=WP_001282267.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2456654 2457001 . - . ID=gene-CCO40_RS11820;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=CCO40_RS11820;old_locus_tag=CCO40_11820 NZ_CP075116.1 Protein Homology CDS 2456654 2457001 . - 0 ID=cds-WP_000108176.1;Parent=gene-CCO40_RS11820;Dbxref=GenBank:WP_000108176.1;Name=WP_000108176.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460396.1;locus_tag=CCO40_RS11820;product=monothiol glutaredoxin 4;protein_id=WP_000108176.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2457336 2458157 . + . ID=gene-CCO40_RS11825;Name=CCO40_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11825;old_locus_tag=CCO40_11825 NZ_CP075116.1 Protein Homology CDS 2457336 2458157 . + 0 ID=cds-WP_001520344.1;Parent=gene-CCO40_RS11825;Dbxref=GenBank:WP_001520344.1;Name=WP_001520344.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310391.1;locus_tag=CCO40_RS11825;product=C40 family peptidase;protein_id=WP_001520344.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2458284 2458865 . + . ID=gene-CCO40_RS11830;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=CCO40_RS11830;old_locus_tag=CCO40_11830 NZ_CP075116.1 Protein Homology CDS 2458284 2458865 . + 0 ID=cds-WP_000007299.1;Parent=gene-CCO40_RS11830;Dbxref=GenBank:WP_000007299.1;Name=WP_000007299.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460394.1;locus_tag=CCO40_RS11830;product=superoxide dismutase [Fe];protein_id=WP_000007299.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2458948 2459037 . - . ID=gene-CCO40_RS11835;Name=cydH;gbkey=Gene;gene=cydH;gene_biotype=protein_coding;gene_synonym=ynhF;locus_tag=CCO40_RS11835;old_locus_tag=CCO40_11835 NZ_CP075116.1 Protein Homology CDS 2458948 2459037 . - 0 ID=cds-WP_000102277.1;Parent=gene-CCO40_RS11835;Dbxref=GenBank:WP_000102277.1;Name=WP_000102277.1;gbkey=CDS;gene=cydH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=CCO40_RS11835;product=cytochrome bd-I oxidase subunit CydH;protein_id=WP_000102277.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2459333 2460358 . + . ID=gene-CCO40_RS11840;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=CCO40_RS11840;old_locus_tag=CCO40_11840 NZ_CP075116.1 Protein Homology CDS 2459333 2460358 . + 0 ID=cds-WP_000190993.1;Parent=gene-CCO40_RS11840;Dbxref=GenBank:WP_000190993.1;Name=WP_000190993.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=CCO40_RS11840;product=HTH-type transcriptional repressor PurR;protein_id=WP_000190993.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2460355 2461287 . - . ID=gene-CCO40_RS11845;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=CCO40_RS11845;old_locus_tag=CCO40_11845 NZ_CP075116.1 Protein Homology CDS 2460355 2461287 . - 0 ID=cds-WP_000269525.1;Parent=gene-CCO40_RS11845;Dbxref=GenBank:WP_000269525.1;Name=WP_000269525.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=CCO40_RS11845;product=DNA-binding transcriptional activator PunR;protein_id=WP_000269525.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2461400 2462605 . + . ID=gene-CCO40_RS11850;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=CCO40_RS11850;old_locus_tag=CCO40_11850 NZ_CP075116.1 Protein Homology CDS 2461400 2462605 . + 0 ID=cds-WP_001182316.1;Parent=gene-CCO40_RS11850;Dbxref=GenBank:WP_001182316.1;Name=WP_001182316.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460391.1;locus_tag=CCO40_RS11850;product=purine nucleoside transporter PunC;protein_id=WP_001182316.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2462895 2464043 . + . ID=gene-CCO40_RS11855;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=CCO40_RS11855;old_locus_tag=CCO40_11855 NZ_CP075116.1 Protein Homology CDS 2462895 2464043 . + 0 ID=cds-WP_000098879.1;Parent=gene-CCO40_RS11855;Dbxref=GenBank:WP_000098879.1;Name=WP_000098879.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460390.1;locus_tag=CCO40_RS11855;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_000098879.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2464085 2464726 . - . ID=gene-CCO40_RS11860;Name=CCO40_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11860;old_locus_tag=CCO40_11860 NZ_CP075116.1 Protein Homology CDS 2464085 2464726 . - 0 ID=cds-WP_000493973.1;Parent=gene-CCO40_RS11860;Dbxref=GenBank:WP_000493973.1;Name=WP_000493973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460389.1;locus_tag=CCO40_RS11860;product=riboflavin synthase;protein_id=WP_000493973.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2464943 2466316 . + . ID=gene-CCO40_RS11865;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=CCO40_RS11865;old_locus_tag=CCO40_11865 NZ_CP075116.1 Protein Homology CDS 2464943 2466316 . + 0 ID=cds-WP_001175072.1;Parent=gene-CCO40_RS11865;Dbxref=GenBank:WP_001175072.1;Name=WP_001175072.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460388.2;locus_tag=CCO40_RS11865;product=multidrug efflux MATE transporter MdtK;protein_id=WP_001175072.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2466468 2466544 . + . ID=gene-CCO40_RS11870;Name=CCO40_RS11870;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS11870;old_locus_tag=CCO40_11870 NZ_CP075116.1 tRNAscan-SE tRNA 2466468 2466544 . + . ID=rna-CCO40_RS11870;Parent=gene-CCO40_RS11870;anticodon=(pos:2466502..2466504);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS11870;product=tRNA-Val NZ_CP075116.1 tRNAscan-SE exon 2466468 2466544 . + . ID=exon-CCO40_RS11870-1;Parent=rna-CCO40_RS11870;anticodon=(pos:2466502..2466504);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS11870;product=tRNA-Val NZ_CP075116.1 RefSeq gene 2466555 2466631 . + . ID=gene-CCO40_RS11875;Name=CCO40_RS11875;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS11875;old_locus_tag=CCO40_11875 NZ_CP075116.1 tRNAscan-SE tRNA 2466555 2466631 . + . ID=rna-CCO40_RS11875;Parent=gene-CCO40_RS11875;anticodon=(pos:2466589..2466591);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS11875;product=tRNA-Val NZ_CP075116.1 tRNAscan-SE exon 2466555 2466631 . + . ID=exon-CCO40_RS11875-1;Parent=rna-CCO40_RS11875;anticodon=(pos:2466589..2466591);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS11875;product=tRNA-Val NZ_CP075116.1 RefSeq gene 2466789 2467847 . - . ID=gene-CCO40_RS11880;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=protein_coding;locus_tag=CCO40_RS11880;old_locus_tag=CCO40_11880 NZ_CP075116.1 Protein Homology CDS 2466789 2467847 . - 0 ID=cds-WP_001291721.1;Parent=gene-CCO40_RS11880;Dbxref=GenBank:WP_001291721.1;Name=WP_001291721.1;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460387.1;locus_tag=CCO40_RS11880;product=SPI-2 type III secretion system apparatus protein SsaU;protein_id=WP_001291721.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2467844 2468623 . - . ID=gene-CCO40_RS11885;Name=ssaT;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=CCO40_RS11885;old_locus_tag=CCO40_11885 NZ_CP075116.1 Protein Homology CDS 2467844 2468623 . - 0 ID=cds-WP_000068766.1;Parent=gene-CCO40_RS11885;Dbxref=GenBank:WP_000068766.1;Name=WP_000068766.1;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460386.1;locus_tag=CCO40_RS11885;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=WP_000068766.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2468624 2468890 . - . ID=gene-CCO40_RS11890;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=CCO40_RS11890;old_locus_tag=CCO40_11890 NZ_CP075116.1 Protein Homology CDS 2468624 2468890 . - 0 ID=cds-WP_000999982.1;Parent=gene-CCO40_RS11890;Dbxref=GenBank:WP_000999982.1;Name=WP_000999982.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460385.1;locus_tag=CCO40_RS11890;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=WP_000999982.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2468887 2469534 . - . ID=gene-CCO40_RS11895;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;locus_tag=CCO40_RS11895;old_locus_tag=CCO40_11895 NZ_CP075116.1 Protein Homology CDS 2468887 2469534 . - 0 ID=cds-WP_000056367.1;Parent=gene-CCO40_RS11895;Dbxref=GenBank:WP_000056367.1;Name=WP_000056367.1;gbkey=CDS;gene=ssaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460384.1;locus_tag=CCO40_RS11895;product=SPI-2 type III secretion system export apparatus protein SsaR;protein_id=WP_000056367.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2469602 2470570 . - . ID=gene-CCO40_RS11900;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=CCO40_RS11900;old_locus_tag=CCO40_11900 NZ_CP075116.1 Protein Homology CDS 2469602 2470570 . - 0 ID=cds-WP_000944190.1;Parent=gene-CCO40_RS11900;Dbxref=GenBank:WP_000944190.1;Name=WP_000944190.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460383.1;locus_tag=CCO40_RS11900;product=SPI-2 type III secretion system cytoplasmic ring protein SsaQ;protein_id=WP_000944190.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2470551 2470925 . - . ID=gene-CCO40_RS11905;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=CCO40_RS11905;old_locus_tag=CCO40_11905 NZ_CP075116.1 Protein Homology CDS 2470551 2470925 . - 0 ID=cds-WP_001223304.1;Parent=gene-CCO40_RS11905;Dbxref=GenBank:WP_001223304.1;Name=WP_001223304.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460382.1;locus_tag=CCO40_RS11905;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=WP_001223304.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2470906 2471283 . - . ID=gene-CCO40_RS11910;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=CCO40_RS11910;old_locus_tag=CCO40_11910 NZ_CP075116.1 Protein Homology CDS 2470906 2471283 . - 0 ID=cds-WP_000449089.1;Parent=gene-CCO40_RS11910;Dbxref=GenBank:WP_000449089.1;Name=WP_000449089.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460381.1;locus_tag=CCO40_RS11910;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=WP_000449089.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2471286 2472587 . - . ID=gene-CCO40_RS11915;Name=ssaN;gbkey=Gene;gene=ssaN;gene_biotype=protein_coding;locus_tag=CCO40_RS11915;old_locus_tag=CCO40_11915 NZ_CP075116.1 Protein Homology CDS 2471286 2472587 . - 0 ID=cds-WP_000787219.1;Parent=gene-CCO40_RS11915;Dbxref=GenBank:WP_000787219.1;Name=WP_000787219.1;gbkey=CDS;gene=ssaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460380.1;locus_tag=CCO40_RS11915;product=SctN family type III secretion system ATPase SsaN;protein_id=WP_000787219.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2472577 2474622 . - . ID=gene-CCO40_RS11920;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=CCO40_RS11920;old_locus_tag=CCO40_11920 NZ_CP075116.1 Protein Homology CDS 2472577 2474622 . - 0 ID=cds-WP_001258216.1;Parent=gene-CCO40_RS11920;Dbxref=GenBank:WP_001258216.1;Name=WP_001258216.1;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460379.1;locus_tag=CCO40_RS11920;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=WP_001258216.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2474607 2474975 . - . ID=gene-CCO40_RS11925;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=CCO40_RS11925;old_locus_tag=CCO40_11925 NZ_CP075116.1 Protein Homology CDS 2474607 2474975 . - 0 ID=cds-WP_000383706.1;Parent=gene-CCO40_RS11925;Dbxref=GenBank:WP_000383706.1;Name=WP_000383706.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460378.1;locus_tag=CCO40_RS11925;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=WP_000383706.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2475033 2476049 . - . ID=gene-CCO40_RS11930;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=CCO40_RS11930;old_locus_tag=CCO40_11930 NZ_CP075116.1 Protein Homology CDS 2475033 2476049 . - 0 ID=cds-WP_000238886.1;Parent=gene-CCO40_RS11930;Dbxref=GenBank:WP_000238886.1;Name=WP_000238886.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=CCO40_RS11930;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=WP_000238886.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2476015 2476689 . - . ID=gene-CCO40_RS11935;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=CCO40_RS11935;old_locus_tag=CCO40_11935 NZ_CP075116.1 Protein Homology CDS 2476015 2476689 . - 0 ID=cds-WP_094889217.1;Parent=gene-CCO40_RS11935;Dbxref=GenBank:WP_094889217.1;Name=WP_094889217.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460376.1;locus_tag=CCO40_RS11935;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=WP_094889217.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2476686 2477234 . - . ID=gene-CCO40_RS11940;Name=CCO40_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11940;old_locus_tag=CCO40_11940 NZ_CP075116.1 Protein Homology CDS 2476686 2477234 . - 0 ID=cds-WP_023166699.1;Parent=gene-CCO40_RS11940;Dbxref=GenBank:WP_023166699.1;Name=WP_023166699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460375.1;locus_tag=CCO40_RS11940;product=type III secretion system domain-containing protein;protein_id=WP_023166699.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2477252 2478001 . - . ID=gene-CCO40_RS11945;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=CCO40_RS11945;old_locus_tag=CCO40_11945 NZ_CP075116.1 Protein Homology CDS 2477252 2478001 . - 0 ID=cds-WP_039589834.1;Parent=gene-CCO40_RS11945;Dbxref=GenBank:WP_039589834.1;Name=WP_039589834.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460374.1;locus_tag=CCO40_RS11945;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;protein_id=WP_039589834.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2477998 2478246 . - . ID=gene-CCO40_RS11950;Name=ssaI;gbkey=Gene;gene=ssaI;gene_biotype=protein_coding;locus_tag=CCO40_RS11950;old_locus_tag=CCO40_11950 NZ_CP075116.1 Protein Homology CDS 2477998 2478246 . - 0 ID=cds-WP_001562742.1;Parent=gene-CCO40_RS11950;Dbxref=GenBank:WP_001562742.1;Name=WP_001562742.1;gbkey=CDS;gene=ssaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562742.1;locus_tag=CCO40_RS11950;product=SctI family type III secretion system inner rod subunit SsaI;protein_id=WP_001562742.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2478258 2478548 . - . ID=gene-CCO40_RS11955;Name=CCO40_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11955;old_locus_tag=CCO40_11955 NZ_CP075116.1 Protein Homology CDS 2478258 2478548 . - 0 ID=cds-WP_000444713.1;Parent=gene-CCO40_RS11955;Dbxref=GenBank:WP_000444713.1;Name=WP_000444713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=CCO40_RS11955;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=WP_000444713.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2478526 2478741 . - . ID=gene-CCO40_RS11960;Name=ssaG;gbkey=Gene;gene=ssaG;gene_biotype=protein_coding;locus_tag=CCO40_RS11960;old_locus_tag=CCO40_11960 NZ_CP075116.1 Protein Homology CDS 2478526 2478741 . - 0 ID=cds-WP_000350226.1;Parent=gene-CCO40_RS11960;Dbxref=GenBank:WP_000350226.1;Name=WP_000350226.1;gbkey=CDS;gene=ssaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460371.1;locus_tag=CCO40_RS11960;product=type III secretion system needle filament protein SsaG;protein_id=WP_000350226.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2478835 2479524 . - . ID=gene-CCO40_RS11965;Name=sseG;gbkey=Gene;gene=sseG;gene_biotype=protein_coding;locus_tag=CCO40_RS11965;old_locus_tag=CCO40_11965 NZ_CP075116.1 Protein Homology CDS 2478835 2479524 . - 0 ID=cds-WP_094889216.1;Parent=gene-CCO40_RS11965;Dbxref=GenBank:WP_094889216.1;Name=WP_094889216.1;Note=SseG%2C from Salmonella pathogenicity island 2%2C is a type III secretion system (T3SS) effector protein.;gbkey=CDS;gene=sseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460370.1;locus_tag=CCO40_RS11965;product=pathogenicity island 2 effector protein SseG;protein_id=WP_094889216.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2479521 2480303 . - . ID=gene-CCO40_RS11970;Name=sseF;gbkey=Gene;gene=sseF;gene_biotype=protein_coding;locus_tag=CCO40_RS11970;old_locus_tag=CCO40_11970 NZ_CP075116.1 Protein Homology CDS 2479521 2480303 . - 0 ID=cds-WP_080193919.1;Parent=gene-CCO40_RS11970;Dbxref=GenBank:WP_080193919.1;Name=WP_080193919.1;gbkey=CDS;gene=sseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=CCO40_RS11970;product=type III secretion systems effector SseF;protein_id=WP_080193919.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2480319 2480753 . - . ID=gene-CCO40_RS11975;Name=sscB;gbkey=Gene;gene=sscB;gene_biotype=protein_coding;locus_tag=CCO40_RS11975;old_locus_tag=CCO40_11975 NZ_CP075116.1 Protein Homology CDS 2480319 2480753 . - 0 ID=cds-WP_000979962.1;Parent=gene-CCO40_RS11975;Dbxref=GenBank:WP_000979962.1;Name=WP_000979962.1;gbkey=CDS;gene=sscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460368.1;locus_tag=CCO40_RS11975;product=SycD/LcrH family type III secretion system chaperone SscB;protein_id=WP_000979962.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2480805 2481221 . - . ID=gene-CCO40_RS11980;Name=sseE;gbkey=Gene;gene=sseE;gene_biotype=protein_coding;locus_tag=CCO40_RS11980;old_locus_tag=CCO40_11980 NZ_CP075116.1 Protein Homology CDS 2480805 2481221 . - 0 ID=cds-WP_031605378.1;Parent=gene-CCO40_RS11980;Dbxref=GenBank:WP_031605378.1;Name=WP_031605378.1;gbkey=CDS;gene=sseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460367.1;locus_tag=CCO40_RS11980;product=LcrR family type III secretion system chaperone SseE;protein_id=WP_031605378.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2481224 2481811 . - . ID=gene-CCO40_RS11985;Name=sseD;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=CCO40_RS11985;old_locus_tag=CCO40_11985 NZ_CP075116.1 Protein Homology CDS 2481224 2481811 . - 0 ID=cds-WP_080232146.1;Parent=gene-CCO40_RS11985;Dbxref=GenBank:WP_080232146.1;Name=WP_080232146.1;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460366.1;locus_tag=CCO40_RS11985;product=SPI-2 type III secretion system translocon protein SseD;protein_id=WP_080232146.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2481827 2483281 . - . ID=gene-CCO40_RS11990;Name=CCO40_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS11990;old_locus_tag=CCO40_11990 NZ_CP075116.1 Protein Homology CDS 2481827 2483281 . - 0 ID=cds-WP_094889215.1;Parent=gene-CCO40_RS11990;Dbxref=GenBank:WP_094889215.1;Name=WP_094889215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460365.1;locus_tag=CCO40_RS11990;product=type III secretion system translocon protein;protein_id=WP_094889215.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2483284 2483757 . - . ID=gene-CCO40_RS11995;Name=sscA;gbkey=Gene;gene=sscA;gene_biotype=protein_coding;locus_tag=CCO40_RS11995;old_locus_tag=CCO40_11995 NZ_CP075116.1 Protein Homology CDS 2483284 2483757 . - 0 ID=cds-WP_080232148.1;Parent=gene-CCO40_RS11995;Dbxref=GenBank:WP_080232148.1;Name=WP_080232148.1;gbkey=CDS;gene=sscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460364.1;locus_tag=CCO40_RS11995;product=SycD/LcrH family type III secretion system chaperone SscA;protein_id=WP_080232148.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2483754 2484344 . - . ID=gene-CCO40_RS12000;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=CCO40_RS12000;old_locus_tag=CCO40_12000 NZ_CP075116.1 Protein Homology CDS 2483754 2484344 . - 0 ID=cds-WP_031605382.1;Parent=gene-CCO40_RS12000;Dbxref=GenBank:WP_031605382.1;Name=WP_031605382.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460363.1;locus_tag=CCO40_RS12000;product=SPI-2 type III secretion system translocon protein SseB;protein_id=WP_031605382.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2484351 2484677 . - . ID=gene-CCO40_RS12005;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=CCO40_RS12005;old_locus_tag=CCO40_12005 NZ_CP075116.1 Protein Homology CDS 2484351 2484677 . - 0 ID=cds-WP_000972855.1;Parent=gene-CCO40_RS12005;Dbxref=GenBank:WP_000972855.1;Name=WP_000972855.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460362.1;locus_tag=CCO40_RS12005;product=SPI-2 type III secretion system chaperone SseA;protein_id=WP_000972855.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2484941 2485183 . - . ID=gene-CCO40_RS12010;Name=ssaE;gbkey=Gene;gene=ssaE;gene_biotype=protein_coding;locus_tag=CCO40_RS12010;old_locus_tag=CCO40_12010 NZ_CP075116.1 Protein Homology CDS 2484941 2485183 . - 0 ID=cds-WP_000210204.1;Parent=gene-CCO40_RS12010;Dbxref=GenBank:WP_000210204.1;Name=WP_000210204.1;gbkey=CDS;gene=ssaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460361.1;locus_tag=CCO40_RS12010;product=YscE family type III secretion system co-chaperone SsaE;protein_id=WP_000210204.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2485191 2486402 . - . ID=gene-CCO40_RS12015;Name=ssaD;gbkey=Gene;gene=ssaD;gene_biotype=protein_coding;locus_tag=CCO40_RS12015;old_locus_tag=CCO40_12015 NZ_CP075116.1 Protein Homology CDS 2485191 2486402 . - 0 ID=cds-WP_094889214.1;Parent=gene-CCO40_RS12015;Dbxref=GenBank:WP_094889214.1;Name=WP_094889214.1;gbkey=CDS;gene=ssaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460360.1;locus_tag=CCO40_RS12015;product=SctD family type III secretion system inner membrane ring subunit SsaD;protein_id=WP_094889214.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2486383 2487876 . - . ID=gene-CCO40_RS12020;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=CCO40_RS12020;old_locus_tag=CCO40_12020 NZ_CP075116.1 Protein Homology CDS 2486383 2487876 . - 0 ID=cds-WP_000261290.1;Parent=gene-CCO40_RS12020;Dbxref=GenBank:WP_000261290.1;Name=WP_000261290.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460359.1;locus_tag=CCO40_RS12020;product=SPI-2 type III secretion system protein SpiA;protein_id=WP_000261290.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2487878 2488279 . - . ID=gene-CCO40_RS12025;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=CCO40_RS12025;old_locus_tag=CCO40_12025 NZ_CP075116.1 Protein Homology CDS 2487878 2488279 . - 0 ID=cds-WP_023218124.1;Parent=gene-CCO40_RS12025;Dbxref=GenBank:WP_023218124.1;Name=WP_023218124.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=CCO40_RS12025;product=SPI-2 type III secretion system protein SpiC;protein_id=WP_023218124.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2488680 2491442 . + . ID=gene-CCO40_RS12030;Name=CCO40_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12030;old_locus_tag=CCO40_12030 NZ_CP075116.1 Protein Homology CDS 2488680 2491442 . + 0 ID=cds-WP_094889213.1;Parent=gene-CCO40_RS12030;Dbxref=GenBank:WP_094889213.1;Name=WP_094889213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=CCO40_RS12030;product=two component system sensor kinase;protein_id=WP_094889213.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2491473 2492111 . + . ID=gene-CCO40_RS12035;Name=CCO40_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12035;old_locus_tag=CCO40_12035 NZ_CP075116.1 Protein Homology CDS 2491473 2492111 . + 0 ID=cds-WP_000666335.1;Parent=gene-CCO40_RS12035;Dbxref=GenBank:WP_000666335.1;Name=WP_000666335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460356.1;locus_tag=CCO40_RS12035;product=two component system response regulator;protein_id=WP_000666335.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2492290 2493018 . + . ID=gene-CCO40_RS12040;Name=CCO40_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12040;old_locus_tag=CCO40_12040 NZ_CP075116.1 Protein Homology CDS 2492290 2493018 . + 0 ID=cds-WP_000122320.1;Parent=gene-CCO40_RS12040;Dbxref=GenBank:WP_000122320.1;Name=WP_000122320.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460355.1;locus_tag=CCO40_RS12040;product=MerR family transcriptional regulator;protein_id=WP_000122320.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2493191 2494150 . + . ID=gene-CCO40_RS12045;Name=mlrB;gbkey=Gene;gene=mlrB;gene_biotype=protein_coding;locus_tag=CCO40_RS12045;old_locus_tag=CCO40_12045 NZ_CP075116.1 Protein Homology CDS 2493191 2494150 . + 0 ID=cds-WP_001060732.1;Parent=gene-CCO40_RS12045;Dbxref=GenBank:WP_001060732.1;Name=WP_001060732.1;gbkey=CDS;gene=mlrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460354.1;locus_tag=CCO40_RS12045;product=transcriptional regulator MlrB;protein_id=WP_001060732.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2494246 2494458 . - . ID=gene-CCO40_RS12050;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=CCO40_RS12050;old_locus_tag=CCO40_12050 NZ_CP075116.1 Protein Homology CDS 2494246 2494458 . - 0 ID=cds-WP_000165779.1;Parent=gene-CCO40_RS12050;Dbxref=GenBank:WP_000165779.1;Name=WP_000165779.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460353.1;locus_tag=CCO40_RS12050;product=fumarate hydratase FumD;protein_id=WP_000165779.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2494556 2495176 . - . ID=gene-CCO40_RS12055;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=CCO40_RS12055;old_locus_tag=CCO40_12055 NZ_CP075116.1 Protein Homology CDS 2494556 2495176 . - 0 ID=cds-WP_000190927.1;Parent=gene-CCO40_RS12055;Dbxref=GenBank:WP_000190927.1;Name=WP_000190927.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460352.3;locus_tag=CCO40_RS12055;product=tetrathionate respiration response regulator TtrR;protein_id=WP_000190927.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2495151 2496929 . - . ID=gene-CCO40_RS12060;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=CCO40_RS12060;old_locus_tag=CCO40_12060 NZ_CP075116.1 Protein Homology CDS 2495151 2496929 . - 0 ID=cds-WP_001214415.1;Parent=gene-CCO40_RS12060;Dbxref=GenBank:WP_001214415.1;Name=WP_001214415.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=CCO40_RS12060;product=tetrathionate respiration histidine kinase TtrS;protein_id=WP_001214415.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2497111 2497845 . + . ID=gene-CCO40_RS12065;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=protein_coding;locus_tag=CCO40_RS12065;old_locus_tag=CCO40_12065 NZ_CP075116.1 Protein Homology CDS 2497111 2497845 . + 0 ID=cds-WP_001523928.1;Parent=gene-CCO40_RS12065;Dbxref=GenBank:WP_001523928.1;Name=WP_001523928.1;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518945.1;locus_tag=CCO40_RS12065;product=tetrathionate reductase subunit TtrB;protein_id=WP_001523928.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2497846 2498868 . + . ID=gene-CCO40_RS12070;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=protein_coding;locus_tag=CCO40_RS12070;old_locus_tag=CCO40_12070 NZ_CP075116.1 Protein Homology CDS 2497846 2498868 . + 0 ID=cds-WP_000149758.1;Parent=gene-CCO40_RS12070;Dbxref=GenBank:WP_000149758.1;Name=WP_000149758.1;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460349.1;locus_tag=CCO40_RS12070;product=tetrathionate reductase subunit TtrC;protein_id=WP_000149758.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2498861 2501923 . + . ID=gene-CCO40_RS12075;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=CCO40_RS12075;old_locus_tag=CCO40_12075 NZ_CP075116.1 Protein Homology CDS 2498861 2501923 . + 0 ID=cds-WP_094889212.1;Parent=gene-CCO40_RS12075;Dbxref=GenBank:WP_094889212.1;Name=WP_094889212.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;gene=ttrA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=CCO40_RS12075;product=tetrathionate reductase subunit TtrA;protein_id=WP_094889212.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2502246 2503472 . + . ID=gene-CCO40_RS12080;Name=CCO40_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12080;old_locus_tag=CCO40_12080 NZ_CP075116.1 Protein Homology CDS 2502246 2503472 . + 0 ID=cds-WP_000471808.1;Parent=gene-CCO40_RS12080;Dbxref=GenBank:WP_000471808.1;Name=WP_000471808.1;Ontology_term=GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=CCO40_RS12080;product=PfkB family carbohydrate kinase;protein_id=WP_000471808.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2503484 2504221 . + . ID=gene-CCO40_RS12085;Name=CCO40_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12085;old_locus_tag=CCO40_12085 NZ_CP075116.1 Protein Homology CDS 2503484 2504221 . + 0 ID=cds-WP_000697195.1;Parent=gene-CCO40_RS12085;Dbxref=GenBank:WP_000697195.1;Name=WP_000697195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=CCO40_RS12085;product=glutamine amidotransferase;protein_id=WP_000697195.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2504280 2505173 . + . ID=gene-CCO40_RS12090;Name=CCO40_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12090;old_locus_tag=CCO40_12090 NZ_CP075116.1 Protein Homology CDS 2504280 2505173 . + 0 ID=cds-WP_042947405.1;Parent=gene-CCO40_RS12090;Dbxref=GenBank:WP_042947405.1;Name=WP_042947405.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=CCO40_RS12090;product=proline iminopeptidase-family hydrolase;protein_id=WP_042947405.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2505195 2506538 . + . ID=gene-CCO40_RS12095;Name=CCO40_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12095;old_locus_tag=CCO40_12095 NZ_CP075116.1 Protein Homology CDS 2505195 2506538 . + 0 ID=cds-WP_094889211.1;Parent=gene-CCO40_RS12095;Dbxref=GenBank:WP_094889211.1;Name=WP_094889211.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460344.1;locus_tag=CCO40_RS12095;product=APC family permease;protein_id=WP_094889211.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2506702 2506932 . + . ID=gene-CCO40_RS22790;Name=ynhH;gbkey=Gene;gene=ynhH;gene_biotype=protein_coding;locus_tag=CCO40_RS22790 NZ_CP075116.1 Protein Homology CDS 2506702 2506932 . + 0 ID=cds-WP_418143684.1;Parent=gene-CCO40_RS22790;Dbxref=GenBank:WP_418143684.1;Name=WP_418143684.1;gbkey=CDS;gene=ynhH;inference=COORDINATES: protein motif:HMM:NF049534.1;locus_tag=CCO40_RS22790;product=protein YnhH;protein_id=WP_418143684.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2506940 2508352 . + . ID=gene-CCO40_RS12100;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=CCO40_RS12100;old_locus_tag=CCO40_12100 NZ_CP075116.1 Protein Homology CDS 2506940 2508352 . + 0 ID=cds-WP_094889210.1;Parent=gene-CCO40_RS12100;Dbxref=GenBank:WP_094889210.1;Name=WP_094889210.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=CCO40_RS12100;product=pyruvate kinase PykF;protein_id=WP_094889210.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2508663 2508899 . + . ID=gene-CCO40_RS12105;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=CCO40_RS12105;old_locus_tag=CCO40_12105 NZ_CP075116.1 Protein Homology CDS 2508663 2508899 . + 0 ID=cds-WP_001082307.1;Parent=gene-CCO40_RS12105;Dbxref=GenBank:WP_001082307.1;Name=WP_001082307.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=CCO40_RS12105;product=murein lipoprotein Lpp;protein_id=WP_001082307.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2508982 2509224 . + . ID=gene-CCO40_RS12110;Name=CCO40_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12110;old_locus_tag=CCO40_12110 NZ_CP075116.1 Protein Homology CDS 2508982 2509224 . + 0 ID=cds-WP_023893769.1;Parent=gene-CCO40_RS12110;Dbxref=GenBank:WP_023893769.1;Name=WP_023893769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082333.1;locus_tag=CCO40_RS12110;product=major outer membrane lipoprotein;protein_id=WP_023893769.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2509305 2509544 . + . ID=gene-CCO40_RS12115;Name=CCO40_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12115;old_locus_tag=CCO40_12115 NZ_CP075116.1 Protein Homology CDS 2509305 2509544 . + 0 ID=cds-WP_094889209.1;Parent=gene-CCO40_RS12115;Dbxref=GenBank:WP_094889209.1;Name=WP_094889209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460341.1;locus_tag=CCO40_RS12115;product=major outer membrane lipoprotein;protein_id=WP_094889209.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2509611 2510612 . - . ID=gene-CCO40_RS12120;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;gene_synonym=ynhG;locus_tag=CCO40_RS12120;old_locus_tag=CCO40_12120 NZ_CP075116.1 Protein Homology CDS 2509611 2510612 . - 0 ID=cds-WP_000817060.1;Parent=gene-CCO40_RS12120;Dbxref=GenBank:WP_000817060.1;Name=WP_000817060.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=CCO40_RS12120;product=L%2CD-transpeptidase LdtE;protein_id=WP_000817060.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2510767 2511183 . - . ID=gene-CCO40_RS12125;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=CCO40_RS12125;old_locus_tag=CCO40_12125 NZ_CP075116.1 Protein Homology CDS 2510767 2511183 . - 0 ID=cds-WP_000729468.1;Parent=gene-CCO40_RS12125;Dbxref=GenBank:WP_000729468.1;Name=WP_000729468.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460339.1;locus_tag=CCO40_RS12125;product=cysteine desulfuration protein SufE;protein_id=WP_000729468.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2511196 2512416 . - . ID=gene-CCO40_RS12130;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=CCO40_RS12130;old_locus_tag=CCO40_12130 NZ_CP075116.1 Protein Homology CDS 2511196 2512416 . - 0 ID=cds-WP_000143859.1;Parent=gene-CCO40_RS12130;Dbxref=GenBank:WP_000143859.1;Name=WP_000143859.1;Ontology_term=GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460338.1;locus_tag=CCO40_RS12130;product=cysteine desulfurase SufS;protein_id=WP_000143859.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2512413 2513684 . - . ID=gene-CCO40_RS12135;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=CCO40_RS12135;old_locus_tag=CCO40_12135 NZ_CP075116.1 Protein Homology CDS 2512413 2513684 . - 0 ID=cds-WP_080090925.1;Parent=gene-CCO40_RS12135;Dbxref=GenBank:WP_080090925.1;Name=WP_080090925.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460337.1;locus_tag=CCO40_RS12135;product=Fe-S cluster assembly protein SufD;protein_id=WP_080090925.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2513659 2514405 . - . ID=gene-CCO40_RS12140;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=CCO40_RS12140;old_locus_tag=CCO40_12140 NZ_CP075116.1 Protein Homology CDS 2513659 2514405 . - 0 ID=cds-WP_000948902.1;Parent=gene-CCO40_RS12140;Dbxref=GenBank:WP_000948902.1;Name=WP_000948902.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=CCO40_RS12140;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000948902.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2514422 2515909 . - . ID=gene-CCO40_RS12145;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=CCO40_RS12145;old_locus_tag=CCO40_12145 NZ_CP075116.1 Protein Homology CDS 2514422 2515909 . - 0 ID=cds-WP_000089388.1;Parent=gene-CCO40_RS12145;Dbxref=GenBank:WP_000089388.1;Name=WP_000089388.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=CCO40_RS12145;product=Fe-S cluster assembly protein SufB;protein_id=WP_000089388.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2515918 2516286 . - . ID=gene-CCO40_RS12150;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=CCO40_RS12150;old_locus_tag=CCO40_12150 NZ_CP075116.1 Protein Homology CDS 2515918 2516286 . - 0 ID=cds-WP_000418969.1;Parent=gene-CCO40_RS12150;Dbxref=GenBank:WP_000418969.1;Name=WP_000418969.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460334.1;locus_tag=CCO40_RS12150;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000418969.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2516713 2518059 . + . ID=gene-CCO40_RS12155;Name=CCO40_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12155;old_locus_tag=CCO40_12155 NZ_CP075116.1 Protein Homology CDS 2516713 2518059 . + 0 ID=cds-WP_048348856.1;Parent=gene-CCO40_RS12155;Dbxref=GenBank:WP_048348856.1;Name=WP_048348856.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460333.1;locus_tag=CCO40_RS12155;product=L-cystine transporter;protein_id=WP_048348856.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2518347 2518535 . - . ID=gene-CCO40_RS12160;Name=CCO40_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12160;old_locus_tag=CCO40_12160 NZ_CP075116.1 Protein Homology CDS 2518347 2518535 . - 0 ID=cds-WP_001537749.1;Parent=gene-CCO40_RS12160;Dbxref=GenBank:WP_001537749.1;Name=WP_001537749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=CCO40_RS12160;product=YdiH family protein;protein_id=WP_001537749.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2518634 2519044 . - . ID=gene-CCO40_RS12165;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=CCO40_RS12165;old_locus_tag=CCO40_12165 NZ_CP075116.1 Protein Homology CDS 2518634 2519044 . - 0 ID=cds-WP_000637926.1;Parent=gene-CCO40_RS12165;Dbxref=GenBank:WP_000637926.1;Name=WP_000637926.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=CCO40_RS12165;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637926.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2519041 2522097 . - . ID=gene-CCO40_RS12170;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=CCO40_RS12170;old_locus_tag=CCO40_12170 NZ_CP075116.1 Protein Homology CDS 2519041 2522097 . - 0 ID=cds-WP_015405972.1;Parent=gene-CCO40_RS12170;Dbxref=GenBank:WP_015405972.1;Name=WP_015405972.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase (NAD+) activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460330.1;locus_tag=CCO40_RS12170;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_015405972.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2522362 2523480 . + . ID=gene-CCO40_RS12175;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=CCO40_RS12175;old_locus_tag=CCO40_12175 NZ_CP075116.1 Protein Homology CDS 2522362 2523480 . + 0 ID=cds-WP_094889208.1;Parent=gene-CCO40_RS12175;Dbxref=GenBank:WP_094889208.1;Name=WP_094889208.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460329.1;locus_tag=CCO40_RS12175;product=AI-2E family transporter YdiK;protein_id=WP_094889208.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2523663 2523770 . + . ID=gene-CCO40_RS12180;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=CCO40_RS12180;old_locus_tag=CCO40_12180 NZ_CP075116.1 cmsearch antisense_RNA 2523663 2523770 . + . ID=rna-CCO40_RS12180;Parent=gene-CCO40_RS12180;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00034,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS12180;product=antisense sRNA RprA NZ_CP075116.1 cmsearch exon 2523663 2523770 . + . ID=exon-CCO40_RS12180-1;Parent=rna-CCO40_RS12180;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00034,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS12180;product=antisense sRNA RprA NZ_CP075116.1 RefSeq gene 2523938 2524297 . + . ID=gene-CCO40_RS12185;Name=CCO40_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12185;old_locus_tag=CCO40_12185 NZ_CP075116.1 Protein Homology CDS 2523938 2524297 . + 0 ID=cds-WP_000980452.1;Parent=gene-CCO40_RS12185;Dbxref=GenBank:WP_000980452.1;Name=WP_000980452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460328.1;locus_tag=CCO40_RS12185;product=YdiL family protein;protein_id=WP_000980452.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2524438 2525649 . + . ID=gene-CCO40_RS12190;Name=CCO40_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12190;old_locus_tag=CCO40_12190 NZ_CP075116.1 Protein Homology CDS 2524438 2525649 . + 0 ID=cds-WP_000797669.1;Parent=gene-CCO40_RS12190;Dbxref=GenBank:WP_000797669.1;Name=WP_000797669.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460327.1;locus_tag=CCO40_RS12190;product=MFS transporter;protein_id=WP_000797669.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2526013 2527248 . + . ID=gene-CCO40_RS12195;Name=CCO40_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12195;old_locus_tag=CCO40_12195 NZ_CP075116.1 Protein Homology CDS 2526013 2527248 . + 0 ID=cds-WP_000081211.1;Parent=gene-CCO40_RS12195;Dbxref=GenBank:WP_000081211.1;Name=WP_000081211.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460326.1;locus_tag=CCO40_RS12195;product=MFS transporter;protein_id=WP_000081211.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2527315 2528181 . + . ID=gene-CCO40_RS12200;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=CCO40_RS12200;old_locus_tag=CCO40_12200 NZ_CP075116.1 Protein Homology CDS 2527315 2528181 . + 0 ID=cds-WP_000383488.1;Parent=gene-CCO40_RS12200;Dbxref=GenBank:WP_000383488.1;Name=WP_000383488.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460325.1;locus_tag=CCO40_RS12200;product=quinate/shikimate dehydrogenase;protein_id=WP_000383488.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2528226 2528984 . + . ID=gene-CCO40_RS12205;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=CCO40_RS12205;old_locus_tag=CCO40_12205 NZ_CP075116.1 Protein Homology CDS 2528226 2528984 . + 0 ID=cds-WP_000860224.1;Parent=gene-CCO40_RS12205;Dbxref=GenBank:WP_000860224.1;Name=WP_000860224.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460324.1;locus_tag=CCO40_RS12205;product=type I 3-dehydroquinate dehydratase;protein_id=WP_000860224.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2529138 2530733 . + . ID=gene-CCO40_RS12210;Name=CCO40_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12210;old_locus_tag=CCO40_12210 NZ_CP075116.1 Protein Homology CDS 2529138 2530733 . + 0 ID=cds-WP_000700599.1;Parent=gene-CCO40_RS12210;Dbxref=GenBank:WP_000700599.1;Name=WP_000700599.1;Ontology_term=GO:0008410,GO:0016782;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=CCO40_RS12210;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_000700599.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2530747 2531898 . + . ID=gene-CCO40_RS12215;Name=CCO40_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12215;old_locus_tag=CCO40_12215 NZ_CP075116.1 Protein Homology CDS 2530747 2531898 . + 0 ID=cds-WP_000347819.1;Parent=gene-CCO40_RS12215;Dbxref=GenBank:WP_000347819.1;Name=WP_000347819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460322.1;locus_tag=CCO40_RS12215;product=acyl-CoA dehydrogenase;protein_id=WP_000347819.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2531974 2532864 . - . ID=gene-CCO40_RS12220;Name=CCO40_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12220;old_locus_tag=CCO40_12220 NZ_CP075116.1 Protein Homology CDS 2531974 2532864 . - 0 ID=cds-WP_094889207.1;Parent=gene-CCO40_RS12220;Dbxref=GenBank:WP_094889207.1;Name=WP_094889207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460321.1;locus_tag=CCO40_RS12220;product=AraC family transcriptional regulator;protein_id=WP_094889207.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2533327 2534091 . + . ID=gene-CCO40_RS12225;Name=CCO40_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12225;old_locus_tag=CCO40_12225 NZ_CP075116.1 Protein Homology CDS 2533327 2534091 . + 0 ID=cds-WP_094889206.1;Parent=gene-CCO40_RS12225;Dbxref=GenBank:WP_094889206.1;Name=WP_094889206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460320.1;locus_tag=CCO40_RS12225;product=electron transfer flavoprotein;protein_id=WP_094889206.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2534113 2535048 . + . ID=gene-CCO40_RS12230;Name=CCO40_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12230;old_locus_tag=CCO40_12230 NZ_CP075116.1 Protein Homology CDS 2534113 2535048 . + 0 ID=cds-WP_023206646.1;Parent=gene-CCO40_RS12230;Dbxref=GenBank:WP_023206646.1;Name=WP_023206646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460319.1;locus_tag=CCO40_RS12230;product=electron transfer flavoprotein subunit alpha;protein_id=WP_023206646.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2535105 2536391 . + . ID=gene-CCO40_RS12235;Name=CCO40_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12235;old_locus_tag=CCO40_12235 NZ_CP075116.1 Protein Homology CDS 2535105 2536391 . + 0 ID=cds-WP_001278565.1;Parent=gene-CCO40_RS12235;Dbxref=GenBank:WP_001278565.1;Name=WP_001278565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=CCO40_RS12235;product=FAD-dependent oxidoreductase;protein_id=WP_001278565.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2536388 2536681 . + . ID=gene-CCO40_RS12240;Name=CCO40_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12240;old_locus_tag=CCO40_12240 NZ_CP075116.1 Protein Homology CDS 2536388 2536681 . + 0 ID=cds-WP_000093359.1;Parent=gene-CCO40_RS12240;Dbxref=GenBank:WP_000093359.1;Name=WP_000093359.1;Ontology_term=GO:0005506,GO:0009055,GO:0051539;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460317.1;locus_tag=CCO40_RS12240;product=ferredoxin family protein;protein_id=WP_000093359.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2536919 2538559 . + . ID=gene-CCO40_RS12245;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=CCO40_RS12245;old_locus_tag=CCO40_12245 NZ_CP075116.1 Protein Homology CDS 2536919 2538559 . + 0 ID=cds-WP_094889205.1;Parent=gene-CCO40_RS12245;Dbxref=GenBank:WP_094889205.1;Name=WP_094889205.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460316.1;locus_tag=CCO40_RS12245;product=medium-chain fatty-acid--CoA ligase;protein_id=WP_094889205.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2538601 2540979 . - . ID=gene-CCO40_RS12250;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=CCO40_RS12250;old_locus_tag=CCO40_12250 NZ_CP075116.1 Protein Homology CDS 2538601 2540979 . - 0 ID=cds-WP_000069340.1;Parent=gene-CCO40_RS12250;Dbxref=GenBank:WP_000069340.1;Name=WP_000069340.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=CCO40_RS12250;product=phosphoenolpyruvate synthase;protein_id=WP_000069340.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2541316 2542149 . + . ID=gene-CCO40_RS12255;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=CCO40_RS12255;old_locus_tag=CCO40_12255 NZ_CP075116.1 Protein Homology CDS 2541316 2542149 . + 0 ID=cds-WP_000370992.1;Parent=gene-CCO40_RS12255;Dbxref=GenBank:WP_000370992.1;Name=WP_000370992.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460314.1;locus_tag=CCO40_RS12255;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_000370992.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2542305 2543351 . + . ID=gene-CCO40_RS12260;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=CCO40_RS12260;old_locus_tag=CCO40_12260 NZ_CP075116.1 Protein Homology CDS 2542305 2543351 . + 0 ID=cds-WP_001082196.1;Parent=gene-CCO40_RS12260;Dbxref=GenBank:WP_001082196.1;Name=WP_001082196.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460313.1;locus_tag=CCO40_RS12260;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_001082196.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2543508 2543699 . + . ID=gene-CCO40_RS12265;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=CCO40_RS12265;old_locus_tag=CCO40_12265 NZ_CP075116.1 Protein Homology CDS 2543508 2543699 . + 0 ID=cds-WP_000089115.1;Parent=gene-CCO40_RS12265;Dbxref=GenBank:WP_000089115.1;Name=WP_000089115.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460312.1;locus_tag=CCO40_RS12265;product=hemin uptake protein HemP;protein_id=WP_000089115.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2543734 2545176 . - . ID=gene-CCO40_RS12270;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=CCO40_RS12270;old_locus_tag=CCO40_12270 NZ_CP075116.1 Protein Homology CDS 2543734 2545176 . - 0 ID=cds-WP_000175682.1;Parent=gene-CCO40_RS12270;Dbxref=GenBank:WP_000175682.1;Name=WP_000175682.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460311.1;locus_tag=CCO40_RS12270;product=protein adenylyltransferase SelO;protein_id=WP_000175682.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2545238 2545951 . - . ID=gene-CCO40_RS12275;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=CCO40_RS12275;old_locus_tag=CCO40_12275 NZ_CP075116.1 Protein Homology CDS 2545238 2545951 . - 0 ID=cds-WP_000562006.1;Parent=gene-CCO40_RS12275;Dbxref=GenBank:WP_000562006.1;Name=WP_000562006.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460310.1;locus_tag=CCO40_RS12275;product=anti-FlhDC factor YdiV;protein_id=WP_000562006.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2546265 2546729 . - . ID=gene-CCO40_RS12280;Name=CCO40_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12280;old_locus_tag=CCO40_12280 NZ_CP075116.1 Protein Homology CDS 2546265 2546729 . - 0 ID=cds-WP_001213256.1;Parent=gene-CCO40_RS12280;Dbxref=GenBank:WP_001213256.1;Name=WP_001213256.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=CCO40_RS12280;product=C40 family peptidase;protein_id=WP_001213256.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2546806 2547555 . - . ID=gene-CCO40_RS12285;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=CCO40_RS12285;old_locus_tag=CCO40_12285 NZ_CP075116.1 Protein Homology CDS 2546806 2547555 . - 0 ID=cds-WP_000080607.1;Parent=gene-CCO40_RS12285;Dbxref=GenBank:WP_000080607.1;Name=WP_000080607.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460308.1;locus_tag=CCO40_RS12285;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_000080607.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2547555 2548106 . - . ID=gene-CCO40_RS12290;Name=CCO40_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12290;old_locus_tag=CCO40_12290 NZ_CP075116.1 Protein Homology CDS 2547555 2548106 . - 0 ID=cds-WP_094889204.1;Parent=gene-CCO40_RS12290;Dbxref=GenBank:WP_094889204.1;Name=WP_094889204.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460307.1;locus_tag=CCO40_RS12290;product=glutathione peroxidase;protein_id=WP_094889204.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2548198 2549178 . - . ID=gene-CCO40_RS12295;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=CCO40_RS12295;old_locus_tag=CCO40_12295 NZ_CP075116.1 Protein Homology CDS 2548198 2549178 . - 0 ID=cds-WP_000954982.1;Parent=gene-CCO40_RS12295;Dbxref=GenBank:WP_000954982.1;Name=WP_000954982.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460306.1;locus_tag=CCO40_RS12295;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_000954982.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2549381 2549680 . - . ID=gene-CCO40_RS12300;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=CCO40_RS12300;old_locus_tag=CCO40_12300 NZ_CP075116.1 Protein Homology CDS 2549381 2549680 . - 0 ID=cds-WP_001229266.1;Parent=gene-CCO40_RS12300;Dbxref=GenBank:WP_001229266.1;Name=WP_001229266.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=CCO40_RS12300;product=integration host factor subunit alpha;protein_id=WP_001229266.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2549685 2552072 . - . ID=gene-CCO40_RS12305;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=CCO40_RS12305;old_locus_tag=CCO40_12305 NZ_CP075116.1 Protein Homology CDS 2549685 2552072 . - 0 ID=cds-WP_094889203.1;Parent=gene-CCO40_RS12305;Dbxref=GenBank:WP_094889203.1;Name=WP_094889203.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=CCO40_RS12305;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_094889203.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2552088 2553071 . - . ID=gene-CCO40_RS12310;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=CCO40_RS12310;old_locus_tag=CCO40_12310 NZ_CP075116.1 Protein Homology CDS 2552088 2553071 . - 0 ID=cds-WP_000018570.1;Parent=gene-CCO40_RS12310;Dbxref=GenBank:WP_000018570.1;Name=WP_000018570.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=CCO40_RS12310;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000018570.1;transl_table=11 NZ_CP075116.1 cmsearch sequence_feature 2553134 2553257 . - . ID=id-NZ_CP075116.1:2553134..2553257;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF01859,COORDINATES: profile:INFERNAL:1.1.5 NZ_CP075116.1 RefSeq gene 2553208 2553252 . - . ID=gene-CCO40_RS12315;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=CCO40_RS12315;old_locus_tag=CCO40_12315 NZ_CP075116.1 Protein Homology CDS 2553208 2553252 . - 0 ID=cds-WP_001386830.1;Parent=gene-CCO40_RS12315;Dbxref=GenBank:WP_001386830.1;Name=WP_001386830.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=CCO40_RS12315;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2553373 2553729 . - . ID=gene-CCO40_RS12320;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=CCO40_RS12320;old_locus_tag=CCO40_12320 NZ_CP075116.1 Protein Homology CDS 2553373 2553729 . - 0 ID=cds-WP_000124850.1;Parent=gene-CCO40_RS12320;Dbxref=GenBank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=CCO40_RS12320;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2553780 2553977 . - . ID=gene-CCO40_RS12325;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=CCO40_RS12325;old_locus_tag=CCO40_12325 NZ_CP075116.1 Protein Homology CDS 2553780 2553977 . - 0 ID=cds-WP_001124225.1;Parent=gene-CCO40_RS12325;Dbxref=GenBank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=CCO40_RS12325;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2554073 2554615 . - . ID=gene-CCO40_RS12330;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=CCO40_RS12330;old_locus_tag=CCO40_12330 NZ_CP075116.1 Protein Homology CDS 2554073 2554615 . - 0 ID=cds-WP_001574431.1;Parent=gene-CCO40_RS12330;Dbxref=GenBank:WP_001574431.1;Name=WP_001574431.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=CCO40_RS12330;product=translation initiation factor IF-3;protein_id=WP_001574431.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2554619 2556547 . - . ID=gene-CCO40_RS12335;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=CCO40_RS12335;old_locus_tag=CCO40_12335 NZ_CP075116.1 Protein Homology CDS 2554619 2556547 . - 0 ID=cds-WP_001144223.1;Parent=gene-CCO40_RS12335;Dbxref=GenBank:WP_001144223.1;Name=WP_001144223.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=CCO40_RS12335;product=threonine--tRNA ligase;protein_id=WP_001144223.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2557439 2558662 . + . ID=gene-CCO40_RS12340;Name=rfc;gbkey=Gene;gene=rfc;gene_biotype=protein_coding;locus_tag=CCO40_RS12340;old_locus_tag=CCO40_12340 NZ_CP075116.1 Protein Homology CDS 2557439 2558662 . + 0 ID=cds-WP_000905563.1;Parent=gene-CCO40_RS12340;Dbxref=GenBank:WP_000905563.1;Name=WP_000905563.1;gbkey=CDS;gene=rfc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460298.1;locus_tag=CCO40_RS12340;product=O-antigen polymerase Rfc;protein_id=WP_000905563.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2558985 2559191 . - . ID=gene-CCO40_RS12345;Name=CCO40_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12345;old_locus_tag=CCO40_12345 NZ_CP075116.1 Protein Homology CDS 2558985 2559191 . - 0 ID=cds-WP_011233063.1;Parent=gene-CCO40_RS12345;Dbxref=GenBank:WP_011233063.1;Name=WP_011233063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447756.1;locus_tag=CCO40_RS12345;product=hypothetical protein;protein_id=WP_011233063.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2559364 2560218 . - . ID=gene-CCO40_RS12350;Name=CCO40_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12350;old_locus_tag=CCO40_12350 NZ_CP075116.1 Protein Homology CDS 2559364 2560218 . - 0 ID=cds-WP_001044093.1;Parent=gene-CCO40_RS12350;Dbxref=GenBank:WP_001044093.1;Name=WP_001044093.1;Ontology_term=GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=CCO40_RS12350;product=DNA/RNA non-specific endonuclease;protein_id=WP_001044093.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2560215 2560529 . - . ID=gene-CCO40_RS12355;Name=CCO40_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12355;old_locus_tag=CCO40_12355 NZ_CP075116.1 Protein Homology CDS 2560215 2560529 . - 0 ID=cds-WP_000916598.1;Parent=gene-CCO40_RS12355;Dbxref=GenBank:WP_000916598.1;Name=WP_000916598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460295.1;locus_tag=CCO40_RS12355;product=hypothetical protein;protein_id=WP_000916598.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2560671 2561630 . + . ID=gene-CCO40_RS12360;Name=CCO40_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12360;old_locus_tag=CCO40_12360 NZ_CP075116.1 Protein Homology CDS 2560671 2561630 . + 0 ID=cds-WP_001046434.1;Parent=gene-CCO40_RS12360;Dbxref=GenBank:WP_001046434.1;Name=WP_001046434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460294.1;locus_tag=CCO40_RS12360;product=lipid A deacylase LpxR family protein;protein_id=WP_001046434.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2561679 2562437 . - . ID=gene-CCO40_RS12365;Name=CCO40_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12365;old_locus_tag=CCO40_12365 NZ_CP075116.1 Protein Homology CDS 2561679 2562437 . - 0 ID=cds-WP_000770981.1;Parent=gene-CCO40_RS12365;Dbxref=GenBank:WP_000770981.1;Name=WP_000770981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460293.1;locus_tag=CCO40_RS12365;product=DUF481 domain-containing protein;protein_id=WP_000770981.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2562726 2563658 . + . ID=gene-CCO40_RS12370;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=CCO40_RS12370;old_locus_tag=CCO40_12370 NZ_CP075116.1 Protein Homology CDS 2562726 2563658 . + 0 ID=cds-WP_000251707.1;Parent=gene-CCO40_RS12370;Dbxref=GenBank:WP_000251707.1;Name=WP_000251707.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460292.1;locus_tag=CCO40_RS12370;product=6-phosphofructokinase II;protein_id=WP_000251707.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2563755 2564045 . + . ID=gene-CCO40_RS12375;Name=CCO40_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12375;old_locus_tag=CCO40_12375 NZ_CP075116.1 Protein Homology CDS 2563755 2564045 . + 0 ID=cds-WP_000146133.1;Parent=gene-CCO40_RS12375;Dbxref=GenBank:WP_000146133.1;Name=WP_000146133.1;Ontology_term=GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460291.1;locus_tag=CCO40_RS12375;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146133.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2564152 2565012 . + . ID=gene-CCO40_RS12380;Name=CCO40_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12380;old_locus_tag=CCO40_12380 NZ_CP075116.1 Protein Homology CDS 2564152 2565012 . + 0 ID=cds-WP_000267686.1;Parent=gene-CCO40_RS12380;Dbxref=GenBank:WP_000267686.1;Name=WP_000267686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460290.1;locus_tag=CCO40_RS12380;product=fructosamine kinase family protein;protein_id=WP_000267686.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2565055 2565591 . - . ID=gene-CCO40_RS12385;Name=CCO40_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12385;old_locus_tag=CCO40_12385 NZ_CP075116.1 Protein Homology CDS 2565055 2565591 . - 0 ID=cds-WP_023231501.1;Parent=gene-CCO40_RS12385;Dbxref=GenBank:WP_023231501.1;Name=WP_023231501.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460289.1;locus_tag=CCO40_RS12385;product=YniB family protein;protein_id=WP_023231501.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2565740 2566408 . + . ID=gene-CCO40_RS12390;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=CCO40_RS12390;old_locus_tag=CCO40_12390 NZ_CP075116.1 Protein Homology CDS 2565740 2566408 . + 0 ID=cds-WP_000106856.1;Parent=gene-CCO40_RS12390;Dbxref=GenBank:WP_000106856.1;Name=WP_000106856.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460288.1;locus_tag=CCO40_RS12390;product=hexitol phosphatase HxpB;protein_id=WP_000106856.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2566546 2567145 . + . ID=gene-CCO40_RS12395;Name=CCO40_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12395;old_locus_tag=CCO40_12395 NZ_CP075116.1 Protein Homology CDS 2566546 2567145 . + 0 ID=cds-WP_079950276.1;Parent=gene-CCO40_RS12395;Dbxref=GenBank:WP_079950276.1;Name=WP_079950276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460287.3;locus_tag=CCO40_RS12395;product=metal-dependent hydrolase;protein_id=WP_079950276.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2567282 2568673 . + . ID=gene-CCO40_RS12400;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=CCO40_RS12400;old_locus_tag=CCO40_12400 NZ_CP075116.1 Protein Homology CDS 2567282 2568673 . + 0 ID=cds-WP_001010654.1;Parent=gene-CCO40_RS12400;Dbxref=GenBank:WP_001010654.1;Name=WP_001010654.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=CCO40_RS12400;product=cystine/sulfocysteine:cation symporter;protein_id=WP_001010654.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2568776 2569018 . - . ID=gene-CCO40_RS12405;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=CCO40_RS12405;old_locus_tag=CCO40_12405 NZ_CP075116.1 Protein Homology CDS 2568776 2569018 . - 0 ID=cds-WP_000977510.1;Parent=gene-CCO40_RS12405;Dbxref=GenBank:WP_000977510.1;Name=WP_000977510.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460285.1;locus_tag=CCO40_RS12405;product=cell division activator CedA;protein_id=WP_000977510.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2569383 2571635 . + . ID=gene-CCO40_RS12410;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=CCO40_RS12410;old_locus_tag=CCO40_12410 NZ_CP075116.1 Protein Homology CDS 2569383 2571635 . + 0 ID=cds-WP_220569201.1;Parent=gene-CCO40_RS12410;Dbxref=GenBank:WP_220569201.1;Name=WP_220569201.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=CCO40_RS12410;product=catalase HPII;protein_id=WP_220569201.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2571750 2572208 . - . ID=gene-CCO40_RS12415;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=CCO40_RS12415;old_locus_tag=CCO40_12415 NZ_CP075116.1 Protein Homology CDS 2571750 2572208 . - 0 ID=cds-WP_000502119.1;Parent=gene-CCO40_RS12415;Dbxref=GenBank:WP_000502119.1;Name=WP_000502119.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=CCO40_RS12415;product=IS200/IS605-like element IS200F family transposase;protein_id=WP_000502119.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2572390 2573148 . - . ID=gene-CCO40_RS12420;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=CCO40_RS12420;old_locus_tag=CCO40_12420 NZ_CP075116.1 Protein Homology CDS 2572390 2573148 . - 0 ID=cds-WP_094889201.1;Parent=gene-CCO40_RS12420;Dbxref=GenBank:WP_094889201.1;Name=WP_094889201.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460283.1;locus_tag=CCO40_RS12420;product=chitin disaccharide deacetylase;protein_id=WP_094889201.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2573161 2574516 . - . ID=gene-CCO40_RS12425;Name=CCO40_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12425;old_locus_tag=CCO40_12425 NZ_CP075116.1 Protein Homology CDS 2573161 2574516 . - 0 ID=cds-WP_000078777.1;Parent=gene-CCO40_RS12425;Dbxref=GenBank:WP_000078777.1;Name=WP_000078777.1;Ontology_term=GO:0005975,GO:0008706,GO:0046872;gbkey=CDS;go_function=6-phospho-beta-glucosidase activity|0008706||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=CCO40_RS12425;product=6-phospho-beta-glucosidase;protein_id=WP_000078777.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2574641 2575483 . - . ID=gene-CCO40_RS12430;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=CCO40_RS12430;old_locus_tag=CCO40_12430 NZ_CP075116.1 Protein Homology CDS 2574641 2575483 . - 0 ID=cds-WP_000983393.1;Parent=gene-CCO40_RS12430;Dbxref=GenBank:WP_000983393.1;Name=WP_000983393.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460281.1;locus_tag=CCO40_RS12430;product=transcriptional regulator ChbR;protein_id=WP_000983393.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2575494 2575841 . - . ID=gene-CCO40_RS12435;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=CCO40_RS12435;old_locus_tag=CCO40_12435 NZ_CP075116.1 Protein Homology CDS 2575494 2575841 . - 0 ID=cds-WP_000459883.1;Parent=gene-CCO40_RS12435;Dbxref=GenBank:WP_000459883.1;Name=WP_000459883.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460280.1;locus_tag=CCO40_RS12435;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_000459883.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2575892 2577250 . - . ID=gene-CCO40_RS12440;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=CCO40_RS12440;old_locus_tag=CCO40_12440 NZ_CP075116.1 Protein Homology CDS 2575892 2577250 . - 0 ID=cds-WP_000073063.1;Parent=gene-CCO40_RS12440;Dbxref=GenBank:WP_000073063.1;Name=WP_000073063.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=CCO40_RS12440;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_000073063.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2577333 2577653 . - . ID=gene-CCO40_RS12445;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=CCO40_RS12445;old_locus_tag=CCO40_12445 NZ_CP075116.1 Protein Homology CDS 2577333 2577653 . - 0 ID=cds-WP_000412161.1;Parent=gene-CCO40_RS12445;Dbxref=GenBank:WP_000412161.1;Name=WP_000412161.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460278.1;locus_tag=CCO40_RS12445;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412161.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2577954 2578295 . - . ID=gene-CCO40_RS12450;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=CCO40_RS12450;old_locus_tag=CCO40_12450 NZ_CP075116.1 Protein Homology CDS 2577954 2578295 . - 0 ID=cds-WP_001039301.1;Parent=gene-CCO40_RS12450;Dbxref=GenBank:WP_001039301.1;Name=WP_001039301.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460277.1;locus_tag=CCO40_RS12450;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001039301.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2578514 2579341 . + . ID=gene-CCO40_RS12455;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=CCO40_RS12455;old_locus_tag=CCO40_12455 NZ_CP075116.1 Protein Homology CDS 2578514 2579341 . + 0 ID=cds-WP_000174982.1;Parent=gene-CCO40_RS12455;Dbxref=GenBank:WP_000174982.1;Name=WP_000174982.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=CCO40_RS12455;product=NAD(+) synthase;protein_id=WP_000174982.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2579462 2580343 . + . ID=gene-CCO40_RS12460;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=CCO40_RS12460;old_locus_tag=CCO40_12460 NZ_CP075116.1 Protein Homology CDS 2579462 2580343 . + 0 ID=cds-WP_001532060.1;Parent=gene-CCO40_RS12460;Dbxref=GenBank:WP_001532060.1;Name=WP_001532060.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233065.1;locus_tag=CCO40_RS12460;product=excinuclease Cho;protein_id=WP_001532060.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2580418 2580903 . - . ID=gene-CCO40_RS12465;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=CCO40_RS12465;old_locus_tag=CCO40_12465 NZ_CP075116.1 Protein Homology CDS 2580418 2580903 . - 0 ID=cds-WP_001229000.1;Parent=gene-CCO40_RS12465;Dbxref=GenBank:WP_001229000.1;Name=WP_001229000.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460274.1;locus_tag=CCO40_RS12465;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_001229000.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2581239 2582207 . - . ID=gene-CCO40_RS12470;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=CCO40_RS12470;old_locus_tag=CCO40_12470 NZ_CP075116.1 Protein Homology CDS 2581239 2582207 . - 0 ID=cds-WP_094889200.1;Parent=gene-CCO40_RS12470;Dbxref=GenBank:WP_094889200.1;Name=WP_094889200.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460273.1;locus_tag=CCO40_RS12470;product=succinylglutamate desuccinylase;protein_id=WP_094889200.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2582200 2583543 . - . ID=gene-CCO40_RS12475;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=CCO40_RS12475;old_locus_tag=CCO40_12475 NZ_CP075116.1 Protein Homology CDS 2582200 2583543 . - 0 ID=cds-WP_000123951.1;Parent=gene-CCO40_RS12475;Dbxref=GenBank:WP_000123951.1;Name=WP_000123951.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460272.1;locus_tag=CCO40_RS12475;product=N-succinylarginine dihydrolase;protein_id=WP_000123951.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2583540 2585018 . - . ID=gene-CCO40_RS12480;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=CCO40_RS12480;old_locus_tag=CCO40_12480 NZ_CP075116.1 Protein Homology CDS 2583540 2585018 . - 0 ID=cds-WP_094889199.1;Parent=gene-CCO40_RS12480;Dbxref=GenBank:WP_094889199.1;Name=WP_094889199.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase (NAD+) activity|0043824||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=CCO40_RS12480;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_094889199.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2585015 2586049 . - . ID=gene-CCO40_RS12485;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=CCO40_RS12485;old_locus_tag=CCO40_12485 NZ_CP075116.1 Protein Homology CDS 2585015 2586049 . - 0 ID=cds-WP_001263889.1;Parent=gene-CCO40_RS12485;Dbxref=GenBank:WP_001263889.1;Name=WP_001263889.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=L-arginine N-succinyltransferase activity|0008791||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=CCO40_RS12485;product=arginine N-succinyltransferase;protein_id=WP_001263889.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2586040 2587266 . - . ID=gene-CCO40_RS12490;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=CCO40_RS12490;old_locus_tag=CCO40_12490 NZ_CP075116.1 Protein Homology CDS 2586040 2587266 . - 0 ID=cds-WP_000059506.1;Parent=gene-CCO40_RS12490;Dbxref=GenBank:WP_000059506.1;Name=WP_000059506.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460269.1;locus_tag=CCO40_RS12490;product=succinylornithine/acetylornithine transaminase;protein_id=WP_000059506.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2587712 2588518 . + . ID=gene-CCO40_RS12495;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=CCO40_RS12495;old_locus_tag=CCO40_12495 NZ_CP075116.1 Protein Homology CDS 2587712 2588518 . + 0 ID=cds-WP_000673954.1;Parent=gene-CCO40_RS12495;Dbxref=GenBank:WP_000673954.1;Name=WP_000673954.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460268.1;locus_tag=CCO40_RS12495;product=exodeoxyribonuclease III;protein_id=WP_000673954.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2588591 2589007 . + . ID=gene-CCO40_RS12500;Name=CCO40_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12500;old_locus_tag=CCO40_12500 NZ_CP075116.1 Protein Homology CDS 2588591 2589007 . + 0 ID=cds-WP_000592136.1;Parent=gene-CCO40_RS12500;Dbxref=GenBank:WP_000592136.1;Name=WP_000592136.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460267.1;locus_tag=CCO40_RS12500;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WP_000592136.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2588967 2589242 . - . ID=gene-CCO40_RS12505;Name=CCO40_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12505;old_locus_tag=CCO40_12505 NZ_CP075116.1 Protein Homology CDS 2588967 2589242 . - 0 ID=cds-WP_001254682.1;Parent=gene-CCO40_RS12505;Dbxref=GenBank:WP_001254682.1;Name=WP_001254682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465441.1;locus_tag=CCO40_RS12505;product=YnjH family protein;protein_id=WP_001254682.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2589481 2590824 . + . ID=gene-CCO40_RS12510;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=CCO40_RS12510;old_locus_tag=CCO40_12510 NZ_CP075116.1 Protein Homology CDS 2589481 2590824 . + 0 ID=cds-WP_000372865.1;Parent=gene-CCO40_RS12510;Dbxref=GenBank:WP_000372865.1;Name=WP_000372865.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460265.1;locus_tag=CCO40_RS12510;product=NADP-specific glutamate dehydrogenase;protein_id=WP_000372865.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2590854 2592803 . - . ID=gene-CCO40_RS12515;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=CCO40_RS12515;old_locus_tag=CCO40_12515 NZ_CP075116.1 Protein Homology CDS 2590854 2592803 . - 0 ID=cds-WP_001235863.1;Parent=gene-CCO40_RS12515;Dbxref=GenBank:WP_001235863.1;Name=WP_001235863.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460264.1;locus_tag=CCO40_RS12515;product=DNA topoisomerase III;protein_id=WP_001235863.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2592808 2593851 . - . ID=gene-CCO40_RS12520;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=CCO40_RS12520;old_locus_tag=CCO40_12520 NZ_CP075116.1 Protein Homology CDS 2592808 2593851 . - 0 ID=cds-WP_094889198.1;Parent=gene-CCO40_RS12520;Dbxref=GenBank:WP_094889198.1;Name=WP_094889198.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=L-selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=CCO40_RS12520;product=selenide%2C water dikinase SelD;protein_id=WP_094889198.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2593969 2594520 . - . ID=gene-CCO40_RS12525;Name=CCO40_RS12525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12525;old_locus_tag=CCO40_12525 NZ_CP075116.1 Protein Homology CDS 2593969 2594520 . - 0 ID=cds-WP_094889197.1;Parent=gene-CCO40_RS12525;Dbxref=GenBank:WP_094889197.1;Name=WP_094889197.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460262.1;locus_tag=CCO40_RS12525;product=NAD(P)H nitroreductase;protein_id=WP_094889197.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2594694 2596550 . + . ID=gene-CCO40_RS12530;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=CCO40_RS12530;old_locus_tag=CCO40_12530 NZ_CP075116.1 Protein Homology CDS 2594694 2596550 . + 0 ID=cds-WP_094889196.1;Parent=gene-CCO40_RS12530;Dbxref=GenBank:WP_094889196.1;Name=WP_094889196.1;Ontology_term=GO:0051604,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460261.1;locus_tag=CCO40_RS12530;product=signal peptide peptidase SppA;protein_id=WP_094889196.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2596646 2597662 . + . ID=gene-CCO40_RS12535;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=CCO40_RS12535;old_locus_tag=CCO40_12535 NZ_CP075116.1 Protein Homology CDS 2596646 2597662 . + 0 ID=cds-WP_001170134.1;Parent=gene-CCO40_RS12535;Dbxref=GenBank:WP_001170134.1;Name=WP_001170134.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=CCO40_RS12535;product=asparaginase;protein_id=WP_001170134.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2597689 2598345 . + . ID=gene-CCO40_RS12540;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=CCO40_RS12540;old_locus_tag=CCO40_12540 NZ_CP075116.1 Protein Homology CDS 2597689 2598345 . + 0 ID=cds-WP_000184707.1;Parent=gene-CCO40_RS12540;Dbxref=GenBank:WP_000184707.1;Name=WP_000184707.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460259.1;locus_tag=CCO40_RS12540;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_000184707.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2598697 2598975 . - . ID=gene-CCO40_RS12545;Name=CCO40_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12545;old_locus_tag=CCO40_12545 NZ_CP075116.1 Protein Homology CDS 2598697 2598975 . - 0 ID=cds-WP_001046864.1;Parent=gene-CCO40_RS12545;Dbxref=GenBank:WP_001046864.1;Name=WP_001046864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460258.1;locus_tag=CCO40_RS12545;product=YeaC family protein;protein_id=WP_001046864.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2599017 2599430 . - . ID=gene-CCO40_RS12550;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=CCO40_RS12550;old_locus_tag=CCO40_12550 NZ_CP075116.1 Protein Homology CDS 2599017 2599430 . - 0 ID=cds-WP_001519539.1;Parent=gene-CCO40_RS12550;Dbxref=GenBank:WP_001519539.1;Name=WP_001519539.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=CCO40_RS12550;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_001519539.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2599772 2600767 . + . ID=gene-CCO40_RS12555;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=CCO40_RS12555;old_locus_tag=CCO40_12555 NZ_CP075116.1 Protein Homology CDS 2599772 2600767 . + 0 ID=cds-WP_000153505.1;Parent=gene-CCO40_RS12555;Dbxref=GenBank:WP_000153505.1;Name=WP_000153505.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=CCO40_RS12555;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153505.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2601102 2601986 . + . ID=gene-CCO40_RS12560;Name=CCO40_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12560;old_locus_tag=CCO40_12560 NZ_CP075116.1 Protein Homology CDS 2601102 2601986 . + 0 ID=cds-WP_000608662.1;Parent=gene-CCO40_RS12560;Dbxref=GenBank:WP_000608662.1;Name=WP_000608662.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=CCO40_RS12560;product=D-hexose-6-phosphate mutarotase;protein_id=WP_000608662.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2602085 2602942 . - . ID=gene-CCO40_RS12565;Name=CCO40_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12565;old_locus_tag=CCO40_12565 NZ_CP075116.1 Protein Homology CDS 2602085 2602942 . - 0 ID=cds-WP_000843751.1;Parent=gene-CCO40_RS12565;Dbxref=GenBank:WP_000843751.1;Name=WP_000843751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460254.1;locus_tag=CCO40_RS12565;product=aldo/keto reductase;protein_id=WP_000843751.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2603039 2604235 . - . ID=gene-CCO40_RS12570;Name=CCO40_RS12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12570;old_locus_tag=CCO40_12570 NZ_CP075116.1 Protein Homology CDS 2603039 2604235 . - 0 ID=cds-WP_094889195.1;Parent=gene-CCO40_RS12570;Dbxref=GenBank:WP_094889195.1;Name=WP_094889195.1;Ontology_term=GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460253.1;locus_tag=CCO40_RS12570;product=anaerobic sulfatase maturase;protein_id=WP_094889195.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2604525 2605271 . - . ID=gene-CCO40_RS12575;Name=CCO40_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12575;old_locus_tag=CCO40_12575 NZ_CP075116.1 Protein Homology CDS 2604525 2605271 . - 0 ID=cds-WP_000163762.1;Parent=gene-CCO40_RS12575;Dbxref=GenBank:WP_000163762.1;Name=WP_000163762.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460252.1;locus_tag=CCO40_RS12575;product=MipA/OmpV family protein;protein_id=WP_000163762.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2605697 2607631 . + . ID=gene-CCO40_RS12580;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=CCO40_RS12580;old_locus_tag=CCO40_12580 NZ_CP075116.1 Protein Homology CDS 2605697 2607631 . + 0 ID=cds-WP_001518010.1;Parent=gene-CCO40_RS12580;Dbxref=GenBank:WP_001518010.1;Name=WP_001518010.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=CCO40_RS12580;product=protein kinase YeaG;protein_id=WP_001518010.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2607754 2609040 . + . ID=gene-CCO40_RS12585;Name=CCO40_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12585;old_locus_tag=CCO40_12585 NZ_CP075116.1 Protein Homology CDS 2607754 2609040 . + 0 ID=cds-WP_000219714.1;Parent=gene-CCO40_RS12585;Dbxref=GenBank:WP_000219714.1;Name=WP_000219714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460250.1;locus_tag=CCO40_RS12585;product=YeaH/YhbH family protein;protein_id=WP_000219714.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2609190 2609387 . - . ID=gene-CCO40_RS12590;Name=CCO40_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12590;old_locus_tag=CCO40_12590 NZ_CP075116.1 GeneMarkS-2+ CDS 2609190 2609387 . - 0 ID=cds-WP_012218875.1;Parent=gene-CCO40_RS12590;Dbxref=GenBank:WP_012218875.1;Name=WP_012218875.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO40_RS12590;product=hypothetical protein;protein_id=WP_012218875.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2609681 2611174 . + . ID=gene-CCO40_RS12595;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=CCO40_RS12595;old_locus_tag=CCO40_12595 NZ_CP075116.1 Protein Homology CDS 2609681 2611174 . + 0 ID=cds-WP_001048646.1;Parent=gene-CCO40_RS12595;Dbxref=GenBank:WP_001048646.1;Name=WP_001048646.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460249.1;locus_tag=CCO40_RS12595;product=diguanylate cyclase DgcJ;protein_id=WP_001048646.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2611224 2611742 . + . ID=gene-CCO40_RS12600;Name=CCO40_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12600;old_locus_tag=CCO40_12600 NZ_CP075116.1 Protein Homology CDS 2611224 2611742 . + 0 ID=cds-WP_010989016.1;Parent=gene-CCO40_RS12600;Dbxref=GenBank:WP_010989016.1;Name=WP_010989016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460248.1;locus_tag=CCO40_RS12600;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_010989016.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2611739 2611846 . - . ID=gene-CCO40_RS12605;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=CCO40_RS12605;old_locus_tag=CCO40_12605 NZ_CP075116.1 Protein Homology CDS 2611739 2611846 . - 0 ID=cds-WP_000272241.1;Parent=gene-CCO40_RS12605;Dbxref=GenBank:WP_000272241.1;Name=WP_000272241.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460247.1;locus_tag=CCO40_RS12605;product=small membrane protein YoaI;protein_id=WP_000272241.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2612052 2612498 . + . ID=gene-CCO40_RS12610;Name=CCO40_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12610;old_locus_tag=CCO40_12610 NZ_CP075116.1 Protein Homology CDS 2612052 2612498 . + 0 ID=cds-WP_000460698.1;Parent=gene-CCO40_RS12610;Dbxref=GenBank:WP_000460698.1;Name=WP_000460698.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460246.2;locus_tag=CCO40_RS12610;product=DUF441 domain-containing protein;protein_id=WP_000460698.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2612478 2613272 . - . ID=gene-CCO40_RS12615;Name=CCO40_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12615;old_locus_tag=CCO40_12615 NZ_CP075116.1 Protein Homology CDS 2612478 2613272 . - 0 ID=cds-WP_000579798.1;Parent=gene-CCO40_RS12615;Dbxref=GenBank:WP_000579798.1;Name=WP_000579798.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460245.1;locus_tag=CCO40_RS12615;product=AraC family transcriptional regulator;protein_id=WP_000579798.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2613373 2614557 . + . ID=gene-CCO40_RS12620;Name=CCO40_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12620;old_locus_tag=CCO40_12620 NZ_CP075116.1 Protein Homology CDS 2613373 2614557 . + 0 ID=cds-WP_000205341.1;Parent=gene-CCO40_RS12620;Dbxref=GenBank:WP_000205341.1;Name=WP_000205341.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460244.1;locus_tag=CCO40_RS12620;product=CynX/NimT family MFS transporter;protein_id=WP_000205341.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2614676 2615023 . + . ID=gene-CCO40_RS12625;Name=CCO40_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12625;old_locus_tag=CCO40_12625 NZ_CP075116.1 Protein Homology CDS 2614676 2615023 . + 0 ID=cds-WP_001222534.1;Parent=gene-CCO40_RS12625;Dbxref=GenBank:WP_001222534.1;Name=WP_001222534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=CCO40_RS12625;product=DUF488 domain-containing protein;protein_id=WP_001222534.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2615009 2615320 . - . ID=gene-CCO40_RS12630;Name=CCO40_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12630;old_locus_tag=CCO40_12630 NZ_CP075116.1 Protein Homology CDS 2615009 2615320 . - 0 ID=cds-WP_000487129.1;Parent=gene-CCO40_RS12630;Dbxref=GenBank:WP_000487129.1;Name=WP_000487129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460242.1;locus_tag=CCO40_RS12630;product=hypothetical protein;protein_id=WP_000487129.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2615389 2615640 . - . ID=gene-CCO40_RS12635;Name=CCO40_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12635;old_locus_tag=CCO40_12635 NZ_CP075116.1 Protein Homology CDS 2615389 2615640 . - 0 ID=cds-WP_000673492.1;Parent=gene-CCO40_RS12635;Dbxref=GenBank:WP_000673492.1;Name=WP_000673492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460241.1;locus_tag=CCO40_RS12635;product=putative hemolysin;protein_id=WP_000673492.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2615836 2615934 . + . ID=gene-CCO40_RS12640;Name=CCO40_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12640;old_locus_tag=CCO40_12640 NZ_CP075116.1 Protein Homology CDS 2615836 2615934 . + 0 ID=cds-WP_001589065.1;Parent=gene-CCO40_RS12640;Dbxref=GenBank:WP_001589065.1;Name=WP_001589065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=CCO40_RS12640;product=YoaK family small membrane protein;protein_id=WP_001589065.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2616073 2616321 . - . ID=gene-CCO40_RS12645;Name=CCO40_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12645;old_locus_tag=CCO40_12645 NZ_CP075116.1 Protein Homology CDS 2616073 2616321 . - 0 ID=cds-WP_000512149.1;Parent=gene-CCO40_RS12645;Dbxref=GenBank:WP_000512149.1;Name=WP_000512149.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460240.1;locus_tag=CCO40_RS12645;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512149.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2616635 2617276 . - . ID=gene-CCO40_RS12650;Name=CCO40_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12650;old_locus_tag=CCO40_12650 NZ_CP075116.1 Protein Homology CDS 2616635 2617276 . - 0 ID=cds-WP_094889194.1;Parent=gene-CCO40_RS12650;Dbxref=GenBank:WP_094889194.1;Name=WP_094889194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460239.1;locus_tag=CCO40_RS12650;product=hypothetical protein;protein_id=WP_094889194.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2617506 2617688 . - . ID=gene-CCO40_RS12655;Name=CCO40_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12655;old_locus_tag=CCO40_12655 NZ_CP075116.1 Protein Homology CDS 2617506 2617688 . - 0 ID=cds-WP_000513733.1;Parent=gene-CCO40_RS12655;Dbxref=GenBank:WP_000513733.1;Name=WP_000513733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=CCO40_RS12655;product=DUF1869 domain-containing protein;protein_id=WP_000513733.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2617691 2618053 . - . ID=gene-CCO40_RS12660;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=CCO40_RS12660;old_locus_tag=CCO40_12660 NZ_CP075116.1 Protein Homology CDS 2617691 2618053 . - 0 ID=cds-WP_001248993.1;Parent=gene-CCO40_RS12660;Dbxref=GenBank:WP_001248993.1;Name=WP_001248993.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460237.1;locus_tag=CCO40_RS12660;product=DUF1971 domain-containing protein YeaR;protein_id=WP_001248993.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2618226 2618864 . - . ID=gene-CCO40_RS12665;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=CCO40_RS12665;old_locus_tag=CCO40_12665 NZ_CP075116.1 Protein Homology CDS 2618226 2618864 . - 0 ID=cds-WP_000457190.1;Parent=gene-CCO40_RS12665;Dbxref=GenBank:WP_000457190.1;Name=WP_000457190.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460236.1;locus_tag=CCO40_RS12665;product=leucine efflux protein LeuE;protein_id=WP_000457190.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2619061 2619606 . - . ID=gene-CCO40_RS12670;Name=CCO40_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12670;old_locus_tag=CCO40_12670 NZ_CP075116.1 Protein Homology CDS 2619061 2619606 . - 0 ID=cds-WP_000617990.1;Parent=gene-CCO40_RS12670;Dbxref=GenBank:WP_000617990.1;Name=WP_000617990.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460235.1;locus_tag=CCO40_RS12670;product=chorismate mutase;protein_id=WP_000617990.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2619689 2619844 . + . ID=gene-CCO40_RS12675;Name=CCO40_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12675;old_locus_tag=CCO40_12675 NZ_CP075116.1 Protein Homology CDS 2619689 2619844 . + 0 ID=cds-WP_001524298.1;Parent=gene-CCO40_RS12675;Dbxref=GenBank:WP_001524298.1;Name=WP_001524298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460234.1;locus_tag=CCO40_RS12675;product=hypothetical protein;protein_id=WP_001524298.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2619923 2620171 . + . ID=gene-CCO40_RS12680;Name=CCO40_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12680;old_locus_tag=CCO40_12680 NZ_CP075116.1 Protein Homology CDS 2619923 2620171 . + 0 ID=cds-WP_000208086.1;Parent=gene-CCO40_RS12680;Dbxref=GenBank:WP_000208086.1;Name=WP_000208086.1;Ontology_term=GO:0071468,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460233.1;locus_tag=CCO40_RS12680;product=biofilm/acid-resistance regulator YmgB/AriR;protein_id=WP_000208086.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2620425 2621273 . - . ID=gene-CCO40_RS12685;Name=CCO40_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12685;old_locus_tag=CCO40_12685 NZ_CP075116.1 Protein Homology CDS 2620425 2621273 . - 0 ID=cds-WP_000190260.1;Parent=gene-CCO40_RS12685;Dbxref=GenBank:WP_000190260.1;Name=WP_000190260.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=CCO40_RS12685;product=MerR family transcriptional regulator;protein_id=WP_000190260.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2621342 2621935 . - . ID=gene-CCO40_RS12690;Name=CCO40_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12690;old_locus_tag=CCO40_12690 NZ_CP075116.1 Protein Homology CDS 2621342 2621935 . - 0 ID=cds-WP_021000259.1;Parent=gene-CCO40_RS12690;Dbxref=GenBank:WP_021000259.1;Name=WP_021000259.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=CCO40_RS12690;product=helix-turn-helix domain-containing protein;protein_id=WP_021000259.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2622080 2622868 . - . ID=gene-CCO40_RS12695;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=CCO40_RS12695;old_locus_tag=CCO40_12695 NZ_CP075116.1 Protein Homology CDS 2622080 2622868 . - 0 ID=cds-WP_000175791.1;Parent=gene-CCO40_RS12695;Dbxref=GenBank:WP_000175791.1;Name=WP_000175791.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=CCO40_RS12695;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=WP_000175791.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2622977 2623624 . - . ID=gene-CCO40_RS12700;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=CCO40_RS12700;old_locus_tag=CCO40_12700 NZ_CP075116.1 Protein Homology CDS 2622977 2623624 . - 0 ID=cds-WP_001537483.1;Parent=gene-CCO40_RS12700;Dbxref=GenBank:WP_001537483.1;Name=WP_001537483.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460229.3;locus_tag=CCO40_RS12700;product=metal-binding protein ZinT;protein_id=WP_001537483.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2623736 2623812 . - . ID=gene-CCO40_RS12705;Name=CCO40_RS12705;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS12705;old_locus_tag=CCO40_12705 NZ_CP075116.1 tRNAscan-SE tRNA 2623736 2623812 . - . ID=rna-CCO40_RS12705;Parent=gene-CCO40_RS12705;anticodon=(pos:complement(2623776..2623778));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS12705;product=tRNA-Arg NZ_CP075116.1 tRNAscan-SE exon 2623736 2623812 . - . ID=exon-CCO40_RS12705-1;Parent=rna-CCO40_RS12705;anticodon=(pos:complement(2623776..2623778));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS12705;product=tRNA-Arg NZ_CP075116.1 RefSeq gene 2623821 2624147 . - . ID=gene-CCO40_RS12710;Name=CCO40_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12710;old_locus_tag=CCO40_12710 NZ_CP075116.1 Protein Homology CDS 2623821 2624147 . - 0 ID=cds-WP_001183699.1;Parent=gene-CCO40_RS12710;Dbxref=GenBank:WP_001183699.1;Name=WP_001183699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460228.1;locus_tag=CCO40_RS12710;product=four-helix bundle copper-binding protein;protein_id=WP_001183699.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2624341 2625474 . + . ID=gene-CCO40_RS12715;Name=CCO40_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12715;old_locus_tag=CCO40_12715 NZ_CP075116.1 Protein Homology CDS 2624341 2625474 . + 0 ID=cds-WP_000456065.1;Parent=gene-CCO40_RS12715;Dbxref=GenBank:WP_000456065.1;Name=WP_000456065.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460227.1;locus_tag=CCO40_RS12715;product=mechanosensitive ion channel family protein;protein_id=WP_000456065.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2625556 2626146 . - . ID=gene-CCO40_RS12720;Name=CCO40_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12720;old_locus_tag=CCO40_12720 NZ_CP075116.1 Protein Homology CDS 2625556 2626146 . - 0 ID=cds-WP_000947459.1;Parent=gene-CCO40_RS12720;Dbxref=GenBank:WP_000947459.1;Name=WP_000947459.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460226.1;locus_tag=CCO40_RS12720;product=ATP-binding cassette domain-containing protein;protein_id=WP_000947459.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2626140 2626937 . - . ID=gene-CCO40_RS12725;Name=CCO40_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12725;old_locus_tag=CCO40_12725 NZ_CP075116.1 Protein Homology CDS 2626140 2626937 . - 0 ID=cds-WP_080169777.1;Parent=gene-CCO40_RS12725;Dbxref=GenBank:WP_080169777.1;Name=WP_080169777.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460225.1;locus_tag=CCO40_RS12725;product=ATP-binding cassette domain-containing protein;protein_id=WP_080169777.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2626931 2627743 . - . ID=gene-CCO40_RS12730;Name=CCO40_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12730;old_locus_tag=CCO40_12730 NZ_CP075116.1 Protein Homology CDS 2626931 2627743 . - 0 ID=cds-WP_000966636.1;Parent=gene-CCO40_RS12730;Dbxref=GenBank:WP_000966636.1;Name=WP_000966636.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460224.1;locus_tag=CCO40_RS12730;product=ABC transporter permease;protein_id=WP_000966636.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2627733 2628707 . - . ID=gene-CCO40_RS12735;Name=CCO40_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12735;old_locus_tag=CCO40_12735 NZ_CP075116.1 Protein Homology CDS 2627733 2628707 . - 0 ID=cds-WP_080169778.1;Parent=gene-CCO40_RS12735;Dbxref=GenBank:WP_080169778.1;Name=WP_080169778.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=CCO40_RS12735;product=ABC transporter permease;protein_id=WP_080169778.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2628707 2630341 . - . ID=gene-CCO40_RS12740;Name=CCO40_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12740;old_locus_tag=CCO40_12740 NZ_CP075116.1 Protein Homology CDS 2628707 2630341 . - 0 ID=cds-WP_080169779.1;Parent=gene-CCO40_RS12740;Dbxref=GenBank:WP_080169779.1;Name=WP_080169779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460222.1;locus_tag=CCO40_RS12740;product=ABC transporter substrate-binding protein;protein_id=WP_080169779.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2631023 2631337 . + . ID=gene-CCO40_RS12745;Name=CCO40_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12745;old_locus_tag=CCO40_12745 NZ_CP075116.1 Protein Homology CDS 2631023 2631337 . + 0 ID=cds-WP_000182479.1;Parent=gene-CCO40_RS12745;Dbxref=GenBank:WP_000182479.1;Name=WP_000182479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460221.1;locus_tag=CCO40_RS12745;product=TRL-like family protein;protein_id=WP_000182479.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2631486 2632016 . + . ID=gene-CCO40_RS12750;Name=CCO40_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12750;old_locus_tag=CCO40_12750 NZ_CP075116.1 Protein Homology CDS 2631486 2632016 . + 0 ID=cds-WP_000929980.1;Parent=gene-CCO40_RS12750;Dbxref=GenBank:WP_000929980.1;Name=WP_000929980.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460220.1;locus_tag=CCO40_RS12750;product=cytochrome b;protein_id=WP_000929980.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2632098 2633141 . - . ID=gene-CCO40_RS12755;Name=CCO40_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12755;old_locus_tag=CCO40_12755 NZ_CP075116.1 Protein Homology CDS 2632098 2633141 . - 0 ID=cds-WP_023237050.1;Parent=gene-CCO40_RS12755;Dbxref=GenBank:WP_023237050.1;Name=WP_023237050.1;Ontology_term=GO:0005975,GO:0004308,GO:0016997;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA,alpha-sialidase activity|0016997||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460219.1;locus_tag=CCO40_RS12755;product=sialidase family protein;protein_id=WP_023237050.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2633480 2633947 . - . ID=gene-CCO40_RS12760;Name=CCO40_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12760;old_locus_tag=CCO40_12760 NZ_CP075116.1 Protein Homology CDS 2633480 2633947 . - 0 ID=cds-WP_001218118.1;Parent=gene-CCO40_RS12760;Dbxref=GenBank:WP_001218118.1;Name=WP_001218118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460218.1;locus_tag=CCO40_RS12760;product=Hsp20 family protein;protein_id=WP_001218118.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2634099 2634371 . - . ID=gene-CCO40_RS12765;Name=CCO40_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12765;old_locus_tag=CCO40_12765 NZ_CP075116.1 Protein Homology CDS 2634099 2634371 . - 0 ID=cds-WP_023204049.1;Parent=gene-CCO40_RS12765;Dbxref=GenBank:WP_023204049.1;Name=WP_023204049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=CCO40_RS12765;product=hypothetical protein;protein_id=WP_023204049.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2635074 2635418 . + . ID=gene-CCO40_RS12770;Name=CCO40_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12770;old_locus_tag=CCO40_12770 NZ_CP075116.1 Protein Homology CDS 2635074 2635418 . + 0 ID=cds-WP_000977725.1;Parent=gene-CCO40_RS12770;Dbxref=GenBank:WP_000977725.1;Name=WP_000977725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=CCO40_RS12770;product=c-type lysozyme inhibitor;protein_id=WP_000977725.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2636173 2636249 . - . ID=gene-CCO40_RS12775;Name=CCO40_RS12775;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS12775;old_locus_tag=CCO40_12775 NZ_CP075116.1 tRNAscan-SE tRNA 2636173 2636249 . - . ID=rna-CCO40_RS12775;Parent=gene-CCO40_RS12775;anticodon=(pos:complement(2636213..2636215));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS12775;product=tRNA-Arg NZ_CP075116.1 tRNAscan-SE exon 2636173 2636249 . - . ID=exon-CCO40_RS12775-1;Parent=rna-CCO40_RS12775;anticodon=(pos:complement(2636213..2636215));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS12775;product=tRNA-Arg NZ_CP075116.1 RefSeq gene 2636640 2637197 . - . ID=gene-CCO40_RS12780;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=CCO40_RS12780;old_locus_tag=CCO40_12780 NZ_CP075116.1 Protein Homology CDS 2636640 2637197 . - 0 ID=cds-WP_000789471.1;Parent=gene-CCO40_RS12780;Dbxref=GenBank:WP_000789471.1;Name=WP_000789471.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460215.1;locus_tag=CCO40_RS12780;product=virulence membrane protein PagC;protein_id=WP_000789471.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2637577 2637705 . - . ID=gene-CCO40_RS22490;Name=CCO40_RS22490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22490 NZ_CP075116.1 Protein Homology CDS 2637577 2637705 . - 0 ID=cds-WP_023215762.1;Parent=gene-CCO40_RS22490;Dbxref=GenBank:WP_023215762.1;Name=WP_023215762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000948849.1;locus_tag=CCO40_RS22490;product=hypothetical protein;protein_id=WP_023215762.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2638004 2638267 . + . ID=gene-CCO40_RS12785;Name=pagD;gbkey=Gene;gene=pagD;gene_biotype=protein_coding;locus_tag=CCO40_RS12785;old_locus_tag=CCO40_12785 NZ_CP075116.1 Protein Homology CDS 2638004 2638267 . + 0 ID=cds-WP_012664625.1;Parent=gene-CCO40_RS12785;Dbxref=GenBank:WP_012664625.1;Name=WP_012664625.1;gbkey=CDS;gene=pagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460214.1;locus_tag=CCO40_RS12785;product=virulence protein PagD;protein_id=WP_012664625.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2638399 2638611 . + . ID=gene-CCO40_RS12790;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=protein_coding;locus_tag=CCO40_RS12790;old_locus_tag=CCO40_12790 NZ_CP075116.1 Protein Homology CDS 2638399 2638611 . + 0 ID=cds-WP_001537306.1;Parent=gene-CCO40_RS12790;Dbxref=GenBank:WP_001537306.1;Name=WP_001537306.1;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460213.1;locus_tag=CCO40_RS12790;product=cold shock-like protein CspF;protein_id=WP_001537306.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2639025 2639546 . + . ID=gene-CCO40_RS12795;Name=CCO40_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12795;old_locus_tag=CCO40_12795 NZ_CP075116.1 Protein Homology CDS 2639025 2639546 . + 0 ID=cds-WP_001520581.1;Parent=gene-CCO40_RS12795;Dbxref=GenBank:WP_001520581.1;Name=WP_001520581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460212.1;locus_tag=CCO40_RS12795;product=ricin-type beta-trefoil lectin domain protein;protein_id=WP_001520581.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2639737 2639976 . + . ID=gene-CCO40_RS12800;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=CCO40_RS12800;old_locus_tag=CCO40_12800 NZ_CP075116.1 Protein Homology CDS 2639737 2639976 . + 0 ID=cds-WP_000289207.1;Parent=gene-CCO40_RS12800;Dbxref=GenBank:WP_000289207.1;Name=WP_000289207.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460211.1;locus_tag=CCO40_RS12800;product=virulence protein MsgA;protein_id=WP_000289207.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2640466 2641254 . + . ID=gene-CCO40_RS12805;Name=envF;gbkey=Gene;gene=envF;gene_biotype=protein_coding;locus_tag=CCO40_RS12805;old_locus_tag=CCO40_12805 NZ_CP075116.1 Protein Homology CDS 2640466 2641254 . + 0 ID=cds-WP_080230094.1;Parent=gene-CCO40_RS12805;Dbxref=GenBank:WP_080230094.1;Name=WP_080230094.1;gbkey=CDS;gene=envF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460210.1;locus_tag=CCO40_RS12805;product=putative envelope lipoprotein EnvF;protein_id=WP_080230094.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2641576 2641782 . + . ID=gene-CCO40_RS22635;Name=CCO40_RS22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22635 NZ_CP075116.1 Protein Homology CDS 2641576 2641782 . + 0 ID=cds-WP_000787625.1;Parent=gene-CCO40_RS22635;Dbxref=GenBank:WP_000787625.1;Name=WP_000787625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000787631.1;locus_tag=CCO40_RS22635;product=hypothetical protein;protein_id=WP_000787625.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2642239 2643363 . - . ID=gene-CCO40_RS12810;Name=sopF;gbkey=Gene;gene=sopF;gene_biotype=protein_coding;locus_tag=CCO40_RS12810;old_locus_tag=CCO40_12810 NZ_CP075116.1 Protein Homology CDS 2642239 2643363 . - 0 ID=cds-WP_000917268.1;Parent=gene-CCO40_RS12810;Dbxref=GenBank:WP_000917268.1;Name=WP_000917268.1;gbkey=CDS;gene=sopF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460209.1;locus_tag=CCO40_RS12810;product=type III secretion system effector SopF;protein_id=WP_000917268.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2643857 2644315 . - . ID=gene-CCO40_RS12815;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=CCO40_RS12815;old_locus_tag=CCO40_12815 NZ_CP075116.1 Protein Homology CDS 2643857 2644315 . - 0 ID=cds-WP_000502119.1-2;Parent=gene-CCO40_RS12815;Dbxref=GenBank:WP_000502119.1;Name=WP_000502119.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=CCO40_RS12815;product=IS200/IS605-like element IS200F family transposase;protein_id=WP_000502119.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2644511 2645761 . - . ID=gene-CCO40_RS12820;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=CCO40_RS12820;old_locus_tag=CCO40_12820 NZ_CP075116.1 Protein Homology CDS 2644511 2645761 . - 0 ID=cds-WP_000444506.1;Parent=gene-CCO40_RS12820;Dbxref=GenBank:WP_000444506.1;Name=WP_000444506.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=CCO40_RS12820;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_000444506.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2645933 2646598 . + . ID=gene-CCO40_RS12825;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=CCO40_RS12825;old_locus_tag=CCO40_12825 NZ_CP075116.1 Protein Homology CDS 2645933 2646598 . + 0 ID=cds-WP_001249412.1;Parent=gene-CCO40_RS12825;Dbxref=GenBank:WP_001249412.1;Name=WP_001249412.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460207.1;locus_tag=CCO40_RS12825;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_001249412.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2646595 2646924 . + . ID=gene-CCO40_RS12830;Name=CCO40_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12830;old_locus_tag=CCO40_12830 NZ_CP075116.1 Protein Homology CDS 2646595 2646924 . + 0 ID=cds-WP_000825956.1;Parent=gene-CCO40_RS12830;Dbxref=GenBank:WP_000825956.1;Name=WP_000825956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460206.1;locus_tag=CCO40_RS12830;product=lysozyme inhibitor LprI family protein;protein_id=WP_000825956.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2646936 2647397 . + . ID=gene-CCO40_RS12835;Name=CCO40_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12835;old_locus_tag=CCO40_12835 NZ_CP075116.1 Protein Homology CDS 2646936 2647397 . + 0 ID=cds-WP_000476067.1;Parent=gene-CCO40_RS12835;Dbxref=GenBank:WP_000476067.1;Name=WP_000476067.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460205.1;locus_tag=CCO40_RS12835;product=NUDIX hydrolase;protein_id=WP_000476067.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2647451 2648557 . + . ID=gene-CCO40_RS12840;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=CCO40_RS12840;old_locus_tag=CCO40_12840 NZ_CP075116.1 Protein Homology CDS 2647451 2648557 . + 0 ID=cds-WP_094889289.1;Parent=gene-CCO40_RS12840;Dbxref=GenBank:WP_094889289.1;Name=WP_094889289.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309632.2;locus_tag=CCO40_RS12840;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_094889289.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2648644 2649285 . + . ID=gene-CCO40_RS12845;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;gene_synonym=ycfC;locus_tag=CCO40_RS12845;old_locus_tag=CCO40_12845 NZ_CP075116.1 Protein Homology CDS 2648644 2649285 . + 0 ID=cds-WP_001519653.1;Parent=gene-CCO40_RS12845;Dbxref=GenBank:WP_001519653.1;Name=WP_001519653.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=CCO40_RS12845;product=high frequency lysogenization protein HflD;protein_id=WP_001519653.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2649289 2650659 . + . ID=gene-CCO40_RS12850;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=CCO40_RS12850;old_locus_tag=CCO40_12850 NZ_CP075116.1 Protein Homology CDS 2649289 2650659 . + 0 ID=cds-WP_094889290.1;Parent=gene-CCO40_RS12850;Dbxref=GenBank:WP_094889290.1;Name=WP_094889290.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=CCO40_RS12850;product=adenylosuccinate lyase;protein_id=WP_094889290.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2650786 2651457 . + . ID=gene-CCO40_RS12855;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=CCO40_RS12855;old_locus_tag=CCO40_12855 NZ_CP075116.1 Protein Homology CDS 2650786 2651457 . + 0 ID=cds-WP_001537766.1;Parent=gene-CCO40_RS12855;Dbxref=GenBank:WP_001537766.1;Name=WP_001537766.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=CCO40_RS12855;product=two-component system response regulator PhoP;protein_id=WP_001537766.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2651457 2652920 . + . ID=gene-CCO40_RS12860;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=CCO40_RS12860;old_locus_tag=CCO40_12860 NZ_CP075116.1 Protein Homology CDS 2651457 2652920 . + 0 ID=cds-WP_001031687.1;Parent=gene-CCO40_RS12860;Dbxref=GenBank:WP_001031687.1;Name=WP_001031687.1;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460200.1;locus_tag=CCO40_RS12860;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_001031687.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2653001 2654122 . + . ID=gene-CCO40_RS12865;Name=CCO40_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12865;old_locus_tag=CCO40_12865 NZ_CP075116.1 Protein Homology CDS 2653001 2654122 . + 0 ID=cds-WP_000456509.1;Parent=gene-CCO40_RS12865;Dbxref=GenBank:WP_000456509.1;Name=WP_000456509.1;Ontology_term=GO:0043687,GO:0008198,GO:0016706;gbkey=CDS;go_function=ferrous iron binding|0008198||IEA,2-oxoglutarate-dependent dioxygenase activity|0016706||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460199.1;locus_tag=CCO40_RS12865;product=ribosomal protein uL16 3-hydroxylase;protein_id=WP_000456509.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2654162 2655496 . - . ID=gene-CCO40_RS12870;Name=CCO40_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12870;old_locus_tag=CCO40_12870 NZ_CP075116.1 Protein Homology CDS 2654162 2655496 . - 0 ID=cds-WP_094889291.1;Parent=gene-CCO40_RS12870;Dbxref=GenBank:WP_094889291.1;Name=WP_094889291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460198.1;locus_tag=CCO40_RS12870;product=tetratricopeptide repeat protein;protein_id=WP_094889291.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2655500 2656729 . - . ID=gene-CCO40_RS12875;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=CCO40_RS12875;old_locus_tag=CCO40_12875 NZ_CP075116.1 Protein Homology CDS 2655500 2656729 . - 0 ID=cds-WP_000359410.1;Parent=gene-CCO40_RS12875;Dbxref=GenBank:WP_000359410.1;Name=WP_000359410.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=CCO40_RS12875;product=peptidase T;protein_id=WP_000359410.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2656980 2658116 . + . ID=gene-CCO40_RS12880;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=CCO40_RS12880;old_locus_tag=CCO40_12880 NZ_CP075116.1 Protein Homology CDS 2656980 2658116 . + 0 ID=cds-WP_000531607.1;Parent=gene-CCO40_RS12880;Dbxref=GenBank:WP_000531607.1;Name=WP_000531607.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460196.1;locus_tag=CCO40_RS12880;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_000531607.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2658100 2658963 . + . ID=gene-CCO40_RS12885;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=CCO40_RS12885;old_locus_tag=CCO40_12885 NZ_CP075116.1 Protein Homology CDS 2658100 2658963 . + 0 ID=cds-WP_000799391.1;Parent=gene-CCO40_RS12885;Dbxref=GenBank:WP_000799391.1;Name=WP_000799391.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460195.1;locus_tag=CCO40_RS12885;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_000799391.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2659292 2660302 . + . ID=gene-CCO40_RS12890;Name=sifA;gbkey=Gene;gene=sifA;gene_biotype=protein_coding;locus_tag=CCO40_RS12890;old_locus_tag=CCO40_12890 NZ_CP075116.1 Protein Homology CDS 2659292 2660302 . + 0 ID=cds-WP_094889292.1;Parent=gene-CCO40_RS12890;Dbxref=GenBank:WP_094889292.1;Name=WP_094889292.1;gbkey=CDS;gene=sifA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460194.1;locus_tag=CCO40_RS12890;product=SPI-2 type III secretion system effector SifA;protein_id=WP_094889292.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2660618 2661397 . + . ID=gene-CCO40_RS12895;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=CCO40_RS12895;old_locus_tag=CCO40_12895 NZ_CP075116.1 Protein Homology CDS 2660618 2661397 . + 0 ID=cds-WP_000580299.1;Parent=gene-CCO40_RS12895;Dbxref=GenBank:WP_000580299.1;Name=WP_000580299.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460193.1;locus_tag=CCO40_RS12895;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580299.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2661422 2662468 . + . ID=gene-CCO40_RS12900;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=CCO40_RS12900;old_locus_tag=CCO40_12900 NZ_CP075116.1 Protein Homology CDS 2661422 2662468 . + 0 ID=cds-WP_000759329.1;Parent=gene-CCO40_RS12900;Dbxref=GenBank:WP_000759329.1;Name=WP_000759329.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=CCO40_RS12900;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_000759329.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2662550 2663371 . - . ID=gene-CCO40_RS12905;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=CCO40_RS12905;old_locus_tag=CCO40_12905 NZ_CP075116.1 Protein Homology CDS 2662550 2663371 . - 0 ID=cds-WP_094889293.1;Parent=gene-CCO40_RS12905;Dbxref=GenBank:WP_094889293.1;Name=WP_094889293.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=CCO40_RS12905;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_094889293.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2663390 2664301 . - . ID=gene-CCO40_RS12910;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=CCO40_RS12910;old_locus_tag=CCO40_12910 NZ_CP075116.1 Protein Homology CDS 2663390 2664301 . - 0 ID=cds-WP_000291331.1;Parent=gene-CCO40_RS12910;Dbxref=GenBank:WP_000291331.1;Name=WP_000291331.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460190.1;locus_tag=CCO40_RS12910;product=N-acetylglucosamine kinase;protein_id=WP_000291331.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2664330 2665574 . - . ID=gene-CCO40_RS12915;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=CCO40_RS12915;old_locus_tag=CCO40_12915 NZ_CP075116.1 Protein Homology CDS 2664330 2665574 . - 0 ID=cds-WP_000168091.1;Parent=gene-CCO40_RS12915;Dbxref=GenBank:WP_000168091.1;Name=WP_000168091.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=CCO40_RS12915;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_000168091.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2665574 2666275 . - . ID=gene-CCO40_RS12920;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=CCO40_RS12920;old_locus_tag=CCO40_12920 NZ_CP075116.1 Protein Homology CDS 2665574 2666275 . - 0 ID=cds-WP_001033714.1;Parent=gene-CCO40_RS12920;Dbxref=GenBank:WP_001033714.1;Name=WP_001033714.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460188.1;locus_tag=CCO40_RS12920;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033714.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2666268 2667467 . - . ID=gene-CCO40_RS12925;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=CCO40_RS12925;old_locus_tag=CCO40_12925 NZ_CP075116.1 Protein Homology CDS 2666268 2667467 . - 0 ID=cds-WP_001518787.1;Parent=gene-CCO40_RS12925;Dbxref=GenBank:WP_001518787.1;Name=WP_001518787.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=CCO40_RS12925;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_001518787.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2667805 2671251 . + . ID=gene-CCO40_RS12930;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=CCO40_RS12930;old_locus_tag=CCO40_12930 NZ_CP075116.1 Protein Homology CDS 2667805 2671251 . + 0 ID=cds-WP_094889294.1;Parent=gene-CCO40_RS12930;Dbxref=GenBank:WP_094889294.1;Name=WP_094889294.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=CCO40_RS12930;product=transcription-repair coupling factor;protein_id=WP_094889294.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2671399 2672364 . + . ID=gene-CCO40_RS12935;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;gene_synonym=ycfS;locus_tag=CCO40_RS12935;old_locus_tag=CCO40_12935 NZ_CP075116.1 Protein Homology CDS 2671399 2672364 . + 0 ID=cds-WP_000482971.1;Parent=gene-CCO40_RS12935;Dbxref=GenBank:WP_000482971.1;Name=WP_000482971.1;Note=The L%2CD-transpeptidase LdtC (formerly YcfS)%2C as found in Escherichia coli%2C is one of three L%2CD-transpeptidases involved in covalently attaching the outer membrane lipoprotein Lpp (Braun's lipoprotein%2C the most abundant protein in E. coli) to peptidoglycan through its C-terminal Lys residue. Other L%2CD-transpeptidases for meso-diaminopimelate cross-links as part of peptidoglycan biosynthesis.;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=CCO40_RS12935;product=L%2CD-transpeptidase LdtC;protein_id=WP_000482971.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2672461 2672718 . - . ID=gene-CCO40_RS12940;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=CCO40_RS12940;old_locus_tag=CCO40_12940 NZ_CP075116.1 Protein Homology CDS 2672461 2672718 . - 0 ID=cds-WP_000800159.1;Parent=gene-CCO40_RS12940;Dbxref=GenBank:WP_000800159.1;Name=WP_000800159.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460184.1;locus_tag=CCO40_RS12940;product=multiple stress resistance protein BhsA;protein_id=WP_000800159.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2672960 2673595 . + . ID=gene-CCO40_RS12945;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=CCO40_RS12945;old_locus_tag=CCO40_12945 NZ_CP075116.1 Protein Homology CDS 2672960 2673595 . + 0 ID=cds-WP_000205985.1;Parent=gene-CCO40_RS12945;Dbxref=GenBank:WP_000205985.1;Name=WP_000205985.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835112.1;locus_tag=CCO40_RS12945;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_000205985.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2673670 2674209 . - . ID=gene-CCO40_RS12950;Name=CCO40_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12950;old_locus_tag=CCO40_12950 NZ_CP075116.1 Protein Homology CDS 2673670 2674209 . - 0 ID=cds-WP_001043449.1;Parent=gene-CCO40_RS12950;Dbxref=GenBank:WP_001043449.1;Name=WP_001043449.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460182.1;locus_tag=CCO40_RS12950;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043449.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2674388 2675692 . - . ID=gene-CCO40_RS12955;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=CCO40_RS12955;old_locus_tag=CCO40_12955 NZ_CP075116.1 Protein Homology CDS 2674388 2675692 . - 0 ID=cds-WP_000211053.1;Parent=gene-CCO40_RS12955;Dbxref=GenBank:WP_000211053.1;Name=WP_000211053.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=CCO40_RS12955;product=NADH-quinone dehydrogenase;protein_id=WP_000211053.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2675947 2676489 . - . ID=gene-CCO40_RS12960;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=CCO40_RS12960;old_locus_tag=CCO40_12960 NZ_CP075116.1 Protein Homology CDS 2675947 2676489 . - 0 ID=cds-WP_000587945.1;Parent=gene-CCO40_RS12960;Dbxref=GenBank:WP_000587945.1;Name=WP_000587945.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=CCO40_RS12960;product=alpha/beta hydrolase YcfP;protein_id=WP_000587945.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2676514 2677539 . - . ID=gene-CCO40_RS12965;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=CCO40_RS12965;old_locus_tag=CCO40_12965 NZ_CP075116.1 Protein Homology CDS 2676514 2677539 . - 0 ID=cds-WP_000529340.1;Parent=gene-CCO40_RS12965;Dbxref=GenBank:WP_000529340.1;Name=WP_000529340.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460179.1;locus_tag=CCO40_RS12965;product=beta-N-acetylhexosaminidase;protein_id=WP_000529340.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2677550 2678374 . - . ID=gene-CCO40_RS12970;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=CCO40_RS12970;old_locus_tag=CCO40_12970 NZ_CP075116.1 Protein Homology CDS 2677550 2678374 . - 0 ID=cds-WP_045717838.1;Parent=gene-CCO40_RS12970;Dbxref=GenBank:WP_045717838.1;Name=WP_045717838.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460178.1;locus_tag=CCO40_RS12970;product=thiamine kinase;protein_id=WP_045717838.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2678355 2678993 . - . ID=gene-CCO40_RS12975;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=CCO40_RS12975;old_locus_tag=CCO40_12975 NZ_CP075116.1 Protein Homology CDS 2678355 2678993 . - 0 ID=cds-WP_000164353.1;Parent=gene-CCO40_RS12975;Dbxref=GenBank:WP_000164353.1;Name=WP_000164353.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=CCO40_RS12975;product=penicillin-binding protein activator LpoB;protein_id=WP_000164353.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2679007 2679381 . - . ID=gene-CCO40_RS12980;Name=CCO40_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS12980;old_locus_tag=CCO40_12980 NZ_CP075116.1 Protein Homology CDS 2679007 2679381 . - 0 ID=cds-WP_000589563.1;Parent=gene-CCO40_RS12980;Dbxref=GenBank:WP_000589563.1;Name=WP_000589563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460176.1;locus_tag=CCO40_RS12980;product=YcfL family putative periplasmic lipoprotein;protein_id=WP_000589563.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2679384 2679743 . - . ID=gene-CCO40_RS12985;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=CCO40_RS12985;old_locus_tag=CCO40_12985 NZ_CP075116.1 Protein Homology CDS 2679384 2679743 . - 0 ID=cds-WP_001532068.1;Parent=gene-CCO40_RS12985;Dbxref=GenBank:WP_001532068.1;Name=WP_001532068.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460175.1;locus_tag=CCO40_RS12985;product=purine nucleoside phosphoramidase;protein_id=WP_001532068.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2680085 2682259 . + . ID=gene-CCO40_RS12990;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=CCO40_RS12990;old_locus_tag=CCO40_12990 NZ_CP075116.1 Protein Homology CDS 2680085 2682259 . + 0 ID=cds-WP_094889295.1;Parent=gene-CCO40_RS12990;Dbxref=GenBank:WP_094889295.1;Name=WP_094889295.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=CCO40_RS12990;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WP_094889295.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2682344 2683777 . - . ID=gene-CCO40_RS12995;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=CCO40_RS12995;old_locus_tag=CCO40_12995 NZ_CP075116.1 Protein Homology CDS 2682344 2683777 . - 0 ID=cds-WP_000475705.1;Parent=gene-CCO40_RS12995;Dbxref=GenBank:WP_000475705.1;Name=WP_000475705.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460173.1;locus_tag=CCO40_RS12995;product=PTS glucose transporter subunit IIBC;protein_id=WP_000475705.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2684072 2684869 . - . ID=gene-CCO40_RS13000;Name=CCO40_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13000;old_locus_tag=CCO40_13000 NZ_CP075116.1 Protein Homology CDS 2684072 2684869 . - 0 ID=cds-WP_000480277.1;Parent=gene-CCO40_RS13000;Dbxref=GenBank:WP_000480277.1;Name=WP_000480277.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460172.1;locus_tag=CCO40_RS13000;product=metal-dependent hydrolase;protein_id=WP_000480277.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2684880 2685884 . - . ID=gene-CCO40_RS13005;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=CCO40_RS13005;old_locus_tag=CCO40_13005 NZ_CP075116.1 Protein Homology CDS 2684880 2685884 . - 0 ID=cds-WP_000872450.1;Parent=gene-CCO40_RS13005;Dbxref=GenBank:WP_000872450.1;Name=WP_000872450.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460171.1;locus_tag=CCO40_RS13005;product=DNA polymerase III subunit delta';protein_id=WP_000872450.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2685881 2686522 . - . ID=gene-CCO40_RS13010;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=CCO40_RS13010;old_locus_tag=CCO40_13010 NZ_CP075116.1 Protein Homology CDS 2685881 2686522 . - 0 ID=cds-WP_000535395.1;Parent=gene-CCO40_RS13010;Dbxref=GenBank:WP_000535395.1;Name=WP_000535395.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460170.1;locus_tag=CCO40_RS13010;product=dTMP kinase;protein_id=WP_000535395.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2686512 2687534 . - . ID=gene-CCO40_RS13015;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=CCO40_RS13015;old_locus_tag=CCO40_13015 NZ_CP075116.1 Protein Homology CDS 2686512 2687534 . - 0 ID=cds-WP_000736463.1;Parent=gene-CCO40_RS13015;Dbxref=GenBank:WP_000736463.1;Name=WP_000736463.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460169.1;locus_tag=CCO40_RS13015;product=cell division protein YceG;protein_id=WP_000736463.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2687537 2688346 . - . ID=gene-CCO40_RS13020;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=CCO40_RS13020;old_locus_tag=CCO40_13020 NZ_CP075116.1 Protein Homology CDS 2687537 2688346 . - 0 ID=cds-WP_000478656.1;Parent=gene-CCO40_RS13020;Dbxref=GenBank:WP_000478656.1;Name=WP_000478656.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460168.1;locus_tag=CCO40_RS13020;product=aminodeoxychorismate lyase;protein_id=WP_000478656.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2688470 2689711 . - . ID=gene-CCO40_RS13025;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=CCO40_RS13025;old_locus_tag=CCO40_13025 NZ_CP075116.1 Protein Homology CDS 2688470 2689711 . - 0 ID=cds-WP_000044664.1;Parent=gene-CCO40_RS13025;Dbxref=GenBank:WP_000044664.1;Name=WP_000044664.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=CCO40_RS13025;product=beta-ketoacyl-ACP synthase II;protein_id=WP_000044664.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2689797 2690033 . - . ID=gene-CCO40_RS13030;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=CCO40_RS13030;old_locus_tag=CCO40_13030 NZ_CP075116.1 Protein Homology CDS 2689797 2690033 . - 0 ID=cds-WP_000103754.1;Parent=gene-CCO40_RS13030;Dbxref=GenBank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=CCO40_RS13030;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2690189 2690923 . - . ID=gene-CCO40_RS13035;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=CCO40_RS13035;old_locus_tag=CCO40_13035 NZ_CP075116.1 Protein Homology CDS 2690189 2690923 . - 0 ID=cds-WP_000007236.1;Parent=gene-CCO40_RS13035;Dbxref=GenBank:WP_000007236.1;Name=WP_000007236.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=CCO40_RS13035;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_000007236.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2690936 2691865 . - . ID=gene-CCO40_RS13040;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=CCO40_RS13040;old_locus_tag=CCO40_13040 NZ_CP075116.1 Protein Homology CDS 2690936 2691865 . - 0 ID=cds-WP_000191342.1;Parent=gene-CCO40_RS13040;Dbxref=GenBank:WP_000191342.1;Name=WP_000191342.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460164.1;locus_tag=CCO40_RS13040;product=ACP S-malonyltransferase;protein_id=WP_000191342.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2691881 2692834 . - . ID=gene-CCO40_RS13045;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=CCO40_RS13045;old_locus_tag=CCO40_13045 NZ_CP075116.1 Protein Homology CDS 2691881 2692834 . - 0 ID=cds-WP_000288148.1;Parent=gene-CCO40_RS13045;Dbxref=GenBank:WP_000288148.1;Name=WP_000288148.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=CCO40_RS13045;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000288148.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2692914 2693993 . - . ID=gene-CCO40_RS13050;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=CCO40_RS13050;old_locus_tag=CCO40_13050 NZ_CP075116.1 Protein Homology CDS 2692914 2693993 . - 0 ID=cds-WP_001518286.1;Parent=gene-CCO40_RS13050;Dbxref=GenBank:WP_001518286.1;Name=WP_001518286.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460162.1;locus_tag=CCO40_RS13050;product=phosphate acyltransferase PlsX;protein_id=WP_001518286.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2694127 2694300 . - . ID=gene-CCO40_RS13055;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=CCO40_RS13055;old_locus_tag=CCO40_13055 NZ_CP075116.1 Protein Homology CDS 2694127 2694300 . - 0 ID=cds-WP_000290727.1;Parent=gene-CCO40_RS13055;Dbxref=GenBank:WP_000290727.1;Name=WP_000290727.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=CCO40_RS13055;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2694352 2694873 . - . ID=gene-CCO40_RS13060;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=CCO40_RS13060;old_locus_tag=CCO40_13060 NZ_CP075116.1 Protein Homology CDS 2694352 2694873 . - 0 ID=cds-WP_001174492.1;Parent=gene-CCO40_RS13060;Dbxref=GenBank:WP_001174492.1;Name=WP_001174492.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=CCO40_RS13060;product=23S rRNA accumulation protein YceD;protein_id=WP_001174492.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2695071 2695655 . + . ID=gene-CCO40_RS13065;Name=CCO40_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13065;old_locus_tag=CCO40_13065 NZ_CP075116.1 Protein Homology CDS 2695071 2695655 . + 0 ID=cds-WP_001137605.1;Parent=gene-CCO40_RS13065;Dbxref=GenBank:WP_001137605.1;Name=WP_001137605.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460159.1;locus_tag=CCO40_RS13065;product=Maf family protein;protein_id=WP_001137605.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2695727 2695951 . - . ID=gene-CCO40_RS13070;Name=CCO40_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13070;old_locus_tag=CCO40_13070 NZ_CP075116.1 GeneMarkS-2+ CDS 2695727 2695951 . - 0 ID=cds-WP_000528423.1;Parent=gene-CCO40_RS13070;Dbxref=GenBank:WP_000528423.1;Name=WP_000528423.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO40_RS13070;product=hypothetical protein;protein_id=WP_000528423.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2696157 2696900 . - . ID=gene-CCO40_RS13075;Name=CCO40_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13075;old_locus_tag=CCO40_13075 NZ_CP075116.1 Protein Homology CDS 2696157 2696900 . - 0 ID=cds-WP_080083309.1;Parent=gene-CCO40_RS13075;Dbxref=GenBank:WP_080083309.1;Name=WP_080083309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460158.1;locus_tag=CCO40_RS13075;product=DUF3053 domain-containing protein;protein_id=WP_080083309.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2697056 2698015 . - . ID=gene-CCO40_RS13080;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=CCO40_RS13080;old_locus_tag=CCO40_13080 NZ_CP075116.1 Protein Homology CDS 2697056 2698015 . - 0 ID=cds-WP_000846319.1;Parent=gene-CCO40_RS13080;Dbxref=GenBank:WP_000846319.1;Name=WP_000846319.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460157.1;locus_tag=CCO40_RS13080;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_000846319.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2698589 2701792 . + . ID=gene-CCO40_RS13085;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=CCO40_RS13085;old_locus_tag=CCO40_13085 NZ_CP075116.1 Protein Homology CDS 2698589 2701792 . + 0 ID=cds-WP_000827450.1;Parent=gene-CCO40_RS13085;Dbxref=GenBank:WP_000827450.1;Name=WP_000827450.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=CCO40_RS13085;product=ribonuclease E;protein_id=WP_000827450.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2702049 2703002 . - . ID=gene-CCO40_RS13090;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=CCO40_RS13090;old_locus_tag=CCO40_13090 NZ_CP075116.1 Protein Homology CDS 2702049 2703002 . - 0 ID=cds-WP_001223032.1;Parent=gene-CCO40_RS13090;Dbxref=GenBank:WP_001223032.1;Name=WP_001223032.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=CCO40_RS13090;product=flagellar hook-associated protein FlgL;protein_id=WP_001223032.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2703017 2704678 . - . ID=gene-CCO40_RS13095;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=CCO40_RS13095;old_locus_tag=CCO40_13095 NZ_CP075116.1 Protein Homology CDS 2703017 2704678 . - 0 ID=cds-WP_000096425.1;Parent=gene-CCO40_RS13095;Dbxref=GenBank:WP_000096425.1;Name=WP_000096425.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460154.1;locus_tag=CCO40_RS13095;product=flagellar hook-associated protein FlgK;protein_id=WP_000096425.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2704743 2705693 . - . ID=gene-CCO40_RS13100;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=CCO40_RS13100;old_locus_tag=CCO40_13100 NZ_CP075116.1 Protein Homology CDS 2704743 2705693 . - 0 ID=cds-WP_000578692.1;Parent=gene-CCO40_RS13100;Dbxref=GenBank:WP_000578692.1;Name=WP_000578692.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460153.1;locus_tag=CCO40_RS13100;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_000578692.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2705693 2706790 . - . ID=gene-CCO40_RS13105;Name=CCO40_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13105;old_locus_tag=CCO40_13105 NZ_CP075116.1 Protein Homology CDS 2705693 2706790 . - 0 ID=cds-WP_001518955.1;Parent=gene-CCO40_RS13105;Dbxref=GenBank:WP_001518955.1;Name=WP_001518955.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460152.1;locus_tag=CCO40_RS13105;product=flagellar basal body P-ring protein FlgI;protein_id=WP_001518955.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2706802 2707500 . - . ID=gene-CCO40_RS13110;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=CCO40_RS13110;old_locus_tag=CCO40_13110 NZ_CP075116.1 Protein Homology CDS 2706802 2707500 . - 0 ID=cds-WP_001174897.1;Parent=gene-CCO40_RS13110;Dbxref=GenBank:WP_001174897.1;Name=WP_001174897.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460151.1;locus_tag=CCO40_RS13110;product=flagellar basal body L-ring protein FlgH;protein_id=WP_001174897.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2707555 2708337 . - . ID=gene-CCO40_RS13115;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=CCO40_RS13115;old_locus_tag=CCO40_13115 NZ_CP075116.1 Protein Homology CDS 2707555 2708337 . - 0 ID=cds-WP_000625851.1;Parent=gene-CCO40_RS13115;Dbxref=GenBank:WP_000625851.1;Name=WP_000625851.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=CCO40_RS13115;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625851.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2708351 2709106 . - . ID=gene-CCO40_RS13120;Name=CCO40_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13120;old_locus_tag=CCO40_13120 NZ_CP075116.1 Protein Homology CDS 2708351 2709106 . - 0 ID=cds-WP_000349278.1;Parent=gene-CCO40_RS13120;Dbxref=GenBank:WP_000349278.1;Name=WP_000349278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=CCO40_RS13120;product=flagellar basal body rod protein FlgF;protein_id=WP_000349278.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2709127 2710338 . - . ID=gene-CCO40_RS13125;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=CCO40_RS13125;old_locus_tag=CCO40_13125 NZ_CP075116.1 Protein Homology CDS 2709127 2710338 . - 0 ID=cds-WP_000010562.1;Parent=gene-CCO40_RS13125;Dbxref=GenBank:WP_000010562.1;Name=WP_000010562.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460148.1;locus_tag=CCO40_RS13125;product=flagellar hook protein FlgE;protein_id=WP_000010562.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2710365 2711063 . - . ID=gene-CCO40_RS13130;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=CCO40_RS13130;old_locus_tag=CCO40_13130 NZ_CP075116.1 Protein Homology CDS 2710365 2711063 . - 0 ID=cds-WP_000020450.1;Parent=gene-CCO40_RS13130;Dbxref=GenBank:WP_000020450.1;Name=WP_000020450.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460147.1;locus_tag=CCO40_RS13130;product=flagellar hook assembly protein FlgD;protein_id=WP_000020450.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2711075 2711479 . - . ID=gene-CCO40_RS13135;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=CCO40_RS13135;old_locus_tag=CCO40_13135 NZ_CP075116.1 Protein Homology CDS 2711075 2711479 . - 0 ID=cds-WP_001196448.1;Parent=gene-CCO40_RS13135;Dbxref=GenBank:WP_001196448.1;Name=WP_001196448.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=CCO40_RS13135;product=flagellar basal body rod protein FlgC;protein_id=WP_001196448.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2711483 2711899 . - . ID=gene-CCO40_RS13140;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=CCO40_RS13140;old_locus_tag=CCO40_13140 NZ_CP075116.1 Protein Homology CDS 2711483 2711899 . - 0 ID=cds-WP_000887043.1;Parent=gene-CCO40_RS13140;Dbxref=GenBank:WP_000887043.1;Name=WP_000887043.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460145.1;locus_tag=CCO40_RS13140;product=flagellar basal body rod protein FlgB;protein_id=WP_000887043.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2712056 2712715 . + . ID=gene-CCO40_RS13145;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=CCO40_RS13145;old_locus_tag=CCO40_13145 NZ_CP075116.1 Protein Homology CDS 2712056 2712715 . + 0 ID=cds-WP_001194082.1;Parent=gene-CCO40_RS13145;Dbxref=GenBank:WP_001194082.1;Name=WP_001194082.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460144.1;locus_tag=CCO40_RS13145;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_001194082.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2712807 2713100 . + . ID=gene-CCO40_RS13150;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=CCO40_RS13150;old_locus_tag=CCO40_13150 NZ_CP075116.1 Protein Homology CDS 2712807 2713100 . + 0 ID=cds-WP_000020893.1;Parent=gene-CCO40_RS13150;Dbxref=GenBank:WP_000020893.1;Name=WP_000020893.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460143.1;locus_tag=CCO40_RS13150;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000020893.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2713105 2713527 . + . ID=gene-CCO40_RS13155;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=CCO40_RS13155;old_locus_tag=CCO40_13155 NZ_CP075116.1 Protein Homology CDS 2713105 2713527 . + 0 ID=cds-WP_000197546.1;Parent=gene-CCO40_RS13155;Dbxref=GenBank:WP_000197546.1;Name=WP_000197546.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460142.1;locus_tag=CCO40_RS13155;product=flagella biosynthesis chaperone FlgN;protein_id=WP_000197546.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2713609 2715144 . - . ID=gene-CCO40_RS13160;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=CCO40_RS13160;old_locus_tag=CCO40_13160 NZ_CP075116.1 Protein Homology CDS 2713609 2715144 . - 0 ID=cds-WP_001537775.1;Parent=gene-CCO40_RS13160;Dbxref=GenBank:WP_001537775.1;Name=WP_001537775.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226258.1;locus_tag=CCO40_RS13160;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_001537775.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2715448 2716371 . - . ID=gene-CCO40_RS13165;Name=CCO40_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13165;old_locus_tag=CCO40_13165 NZ_CP075116.1 Protein Homology CDS 2715448 2716371 . - 0 ID=cds-WP_001259725.1;Parent=gene-CCO40_RS13165;Dbxref=GenBank:WP_001259725.1;Name=WP_001259725.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460140.1;locus_tag=CCO40_RS13165;product=Gfo/Idh/MocA family protein;protein_id=WP_001259725.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2716373 2717020 . - . ID=gene-CCO40_RS13170;Name=CCO40_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13170;old_locus_tag=CCO40_13170 NZ_CP075116.1 Protein Homology CDS 2716373 2717020 . - 0 ID=cds-WP_000873048.1;Parent=gene-CCO40_RS13170;Dbxref=GenBank:WP_000873048.1;Name=WP_000873048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460139.1;locus_tag=CCO40_RS13170;product=YceH family protein;protein_id=WP_000873048.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2717056 2717640 . - . ID=gene-CCO40_RS13175;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=CCO40_RS13175;old_locus_tag=CCO40_13175 NZ_CP075116.1 Protein Homology CDS 2717056 2717640 . - 0 ID=cds-WP_000468204.1;Parent=gene-CCO40_RS13175;Dbxref=GenBank:WP_000468204.1;Name=WP_000468204.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=CCO40_RS13175;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468204.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2717877 2719085 . + . ID=gene-CCO40_RS13180;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=CCO40_RS13180;old_locus_tag=CCO40_13180 NZ_CP075116.1 Protein Homology CDS 2717877 2719085 . + 0 ID=cds-WP_000092178.1;Parent=gene-CCO40_RS13180;Dbxref=GenBank:WP_000092178.1;Name=WP_000092178.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=CCO40_RS13180;product=multidrug efflux MFS transporter MdtH;protein_id=WP_000092178.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2719149 2719796 . + . ID=gene-CCO40_RS13185;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=CCO40_RS13185;old_locus_tag=CCO40_13185 NZ_CP075116.1 Protein Homology CDS 2719149 2719796 . + 0 ID=cds-WP_000780893.1;Parent=gene-CCO40_RS13185;Dbxref=GenBank:WP_000780893.1;Name=WP_000780893.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460136.1;locus_tag=CCO40_RS13185;product=glutaredoxin 2;protein_id=WP_000780893.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2719921 2720481 . + . ID=gene-CCO40_RS13190;Name=CCO40_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13190;old_locus_tag=CCO40_13190 NZ_CP075116.1 Protein Homology CDS 2719921 2720481 . + 0 ID=cds-WP_000713050.1;Parent=gene-CCO40_RS13190;Dbxref=GenBank:WP_000713050.1;Name=WP_000713050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460135.1;locus_tag=CCO40_RS13190;product=lipoprotein;protein_id=WP_000713050.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2720585 2721631 . + . ID=gene-CCO40_RS13195;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=CCO40_RS13195;old_locus_tag=CCO40_13195 NZ_CP075116.1 Protein Homology CDS 2720585 2721631 . + 0 ID=cds-WP_000126610.1;Parent=gene-CCO40_RS13195;Dbxref=GenBank:WP_000126610.1;Name=WP_000126610.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=CCO40_RS13195;product=dihydroorotase;protein_id=WP_000126610.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2721705 2721950 . + . ID=gene-CCO40_RS13200;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=CCO40_RS13200;old_locus_tag=CCO40_13200 NZ_CP075116.1 Protein Homology CDS 2721705 2721950 . + 0 ID=cds-WP_001217764.1;Parent=gene-CCO40_RS13200;Dbxref=GenBank:WP_001217764.1;Name=WP_001217764.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=CCO40_RS13200;product=DNA damage-inducible protein I;protein_id=WP_001217764.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2722240 2722494 . + . ID=gene-CCO40_RS13205;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=CCO40_RS13205;old_locus_tag=CCO40_13205 NZ_CP075116.1 Protein Homology CDS 2722240 2722494 . + 0 ID=cds-WP_000414441.1;Parent=gene-CCO40_RS13205;Dbxref=GenBank:WP_000414441.1;Name=WP_000414441.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=CCO40_RS13205;product=biofilm formation regulator BssS;protein_id=WP_000414441.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2722607 2723725 . + . ID=gene-CCO40_RS13210;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=CCO40_RS13210;old_locus_tag=CCO40_13210 NZ_CP075116.1 Protein Homology CDS 2722607 2723725 . + 0 ID=cds-WP_000872776.1;Parent=gene-CCO40_RS13210;Dbxref=GenBank:WP_000872776.1;Name=WP_000872776.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460131.1;locus_tag=CCO40_RS13210;product=N-methyl-L-tryptophan oxidase;protein_id=WP_000872776.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2723766 2723879 . + . ID=gene-CCO40_RS13215;Name=CCO40_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13215;old_locus_tag=CCO40_13215 NZ_CP075116.1 Protein Homology CDS 2723766 2723879 . + 0 ID=cds-WP_001253282.1;Parent=gene-CCO40_RS13215;Dbxref=GenBank:WP_001253282.1;Name=WP_001253282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460130.1;locus_tag=CCO40_RS13215;product=YceO family protein;protein_id=WP_001253282.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2724142 2724714 . + . ID=gene-CCO40_RS13220;Name=CCO40_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13220;old_locus_tag=CCO40_13220 NZ_CP075116.1 Protein Homology CDS 2724142 2724714 . + 0 ID=cds-WP_001159796.1;Parent=gene-CCO40_RS13220;Dbxref=GenBank:WP_001159796.1;Name=WP_001159796.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=CCO40_RS13220;product=cytochrome b;protein_id=WP_001159796.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2724711 2725286 . + . ID=gene-CCO40_RS13225;Name=CCO40_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13225;old_locus_tag=CCO40_13225 NZ_CP075116.1 Protein Homology CDS 2724711 2725286 . + 0 ID=cds-WP_000739886.1;Parent=gene-CCO40_RS13225;Dbxref=GenBank:WP_000739886.1;Name=WP_000739886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460128.1;locus_tag=CCO40_RS13225;product=YceI family protein;protein_id=WP_000739886.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2725338 2726390 . - . ID=gene-CCO40_RS13230;Name=trhO;gbkey=Gene;gene=trhO;gene_biotype=protein_coding;gene_synonym=yceA;locus_tag=CCO40_RS13230;old_locus_tag=CCO40_13230 NZ_CP075116.1 Protein Homology CDS 2725338 2726390 . - 0 ID=cds-WP_001144641.1;Parent=gene-CCO40_RS13230;Dbxref=GenBank:WP_001144641.1;Name=WP_001144641.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhO;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460127.1;locus_tag=CCO40_RS13230;product=oxygen-dependent tRNA uridine(34) hydroxylase TrhO;protein_id=WP_001144641.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2726610 2727530 . + . ID=gene-CCO40_RS13235;Name=CCO40_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13235;old_locus_tag=CCO40_13235 NZ_CP075116.1 Protein Homology CDS 2726610 2727530 . + 0 ID=cds-WP_000163973.1;Parent=gene-CCO40_RS13235;Dbxref=GenBank:WP_000163973.1;Name=WP_000163973.1;Ontology_term=GO:0036104,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460126.1;locus_tag=CCO40_RS13235;product=Kdo(2)-lipid IV(A) acyltransferase;protein_id=WP_000163973.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2727685 2728899 . + . ID=gene-CCO40_RS13240;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=CCO40_RS13240;old_locus_tag=CCO40_13240 NZ_CP075116.1 Protein Homology CDS 2727685 2728899 . + 0 ID=cds-WP_000075052.1;Parent=gene-CCO40_RS13240;Dbxref=GenBank:WP_000075052.1;Name=WP_000075052.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460125.1;locus_tag=CCO40_RS13240;product=multidrug efflux MFS transporter MdtG;protein_id=WP_000075052.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2728981 2729355 . + . ID=gene-CCO40_RS13245;Name=CCO40_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13245;old_locus_tag=CCO40_13245 NZ_CP075116.1 Protein Homology CDS 2728981 2729355 . + 0 ID=cds-WP_000180050.1;Parent=gene-CCO40_RS13245;Dbxref=GenBank:WP_000180050.1;Name=WP_000180050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460124.1;locus_tag=CCO40_RS13245;product=MysB family protein;protein_id=WP_000180050.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2729356 2729583 . - . ID=gene-CCO40_RS13250;Name=CCO40_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13250;old_locus_tag=CCO40_13250 NZ_CP075116.1 Protein Homology CDS 2729356 2729583 . - 0 ID=cds-WP_001217832.1;Parent=gene-CCO40_RS13250;Dbxref=GenBank:WP_001217832.1;Name=WP_001217832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460123.1;locus_tag=CCO40_RS13250;product=YceK/YidQ family lipoprotein;protein_id=WP_001217832.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2729657 2732200 . - . ID=gene-CCO40_RS13255;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=CCO40_RS13255;old_locus_tag=CCO40_13255 NZ_CP075116.1 Protein Homology CDS 2729657 2732200 . - 0 ID=cds-WP_001044610.1;Parent=gene-CCO40_RS13255;Dbxref=GenBank:WP_001044610.1;Name=WP_001044610.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460122.1;locus_tag=CCO40_RS13255;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_001044610.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2732193 2733728 . - . ID=gene-CCO40_RS13260;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=CCO40_RS13260;old_locus_tag=CCO40_13260 NZ_CP075116.1 Protein Homology CDS 2732193 2733728 . - 0 ID=cds-WP_001562609.1;Parent=gene-CCO40_RS13260;Dbxref=GenBank:WP_001562609.1;Name=WP_001562609.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460121.1;locus_tag=CCO40_RS13260;product=glucans biosynthesis protein MdoG;protein_id=WP_001562609.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2734000 2735154 . + . ID=gene-CCO40_RS13265;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=CCO40_RS13265;old_locus_tag=CCO40_13265 NZ_CP075116.1 Protein Homology CDS 2734000 2735154 . + 0 ID=cds-WP_094889296.1;Parent=gene-CCO40_RS13265;Dbxref=GenBank:WP_094889296.1;Name=WP_094889296.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460120.1;locus_tag=CCO40_RS13265;product=glucans biosynthesis protein MdoC;protein_id=WP_094889296.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2735171 2736658 . - . ID=gene-CCO40_RS13270;Name=CCO40_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13270;old_locus_tag=CCO40_13270 NZ_CP075116.1 Protein Homology CDS 2735171 2736658 . - 0 ID=cds-WP_000976323.1;Parent=gene-CCO40_RS13270;Dbxref=GenBank:WP_000976323.1;Name=WP_000976323.1;Ontology_term=GO:0032049,GO:0090483;gbkey=CDS;go_function=phosphatidylglycerol-phosphatidylethanolamine phosphatidyltransferase activity|0090483||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=CCO40_RS13270;product=phospholipase D family protein;protein_id=WP_000976323.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2736594 2737133 . - . ID=gene-CCO40_RS13275;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=CCO40_RS13275;old_locus_tag=CCO40_13275 NZ_CP075116.1 Protein Homology CDS 2736594 2737133 . - 0 ID=cds-WP_094889297.1;Parent=gene-CCO40_RS13275;Dbxref=GenBank:WP_094889297.1;Name=WP_094889297.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=CCO40_RS13275;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_094889297.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2737219 2737539 . - . ID=gene-CCO40_RS13280;Name=CCO40_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13280;old_locus_tag=CCO40_13280 NZ_CP075116.1 Protein Homology CDS 2737219 2737539 . - 0 ID=cds-WP_000111257.1;Parent=gene-CCO40_RS13280;Dbxref=GenBank:WP_000111257.1;Name=WP_000111257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460117.1;locus_tag=CCO40_RS13280;product=YmdA family protein;protein_id=WP_000111257.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2737670 2737996 . - . ID=gene-CCO40_RS13285;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=CCO40_RS13285;old_locus_tag=CCO40_13285 NZ_CP075116.1 Protein Homology CDS 2737670 2737996 . - 0 ID=cds-WP_000557256.1;Parent=gene-CCO40_RS13285;Dbxref=GenBank:WP_000557256.1;Name=WP_000557256.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460116.1;locus_tag=CCO40_RS13285;product=curli assembly chaperone CsgC;protein_id=WP_000557256.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2738058 2738513 . - . ID=gene-CCO40_RS13290;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=CCO40_RS13290;old_locus_tag=CCO40_13290 NZ_CP075116.1 Protein Homology CDS 2738058 2738513 . - 0 ID=cds-WP_000771416.1;Parent=gene-CCO40_RS13290;Dbxref=GenBank:WP_000771416.1;Name=WP_000771416.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460115.1;locus_tag=CCO40_RS13290;product=curli major subunit CsgA;protein_id=WP_000771416.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2738555 2739010 . - . ID=gene-CCO40_RS13295;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=CCO40_RS13295;old_locus_tag=CCO40_13295 NZ_CP075116.1 Protein Homology CDS 2738555 2739010 . - 0 ID=cds-WP_000791655.1;Parent=gene-CCO40_RS13295;Dbxref=GenBank:WP_000791655.1;Name=WP_000791655.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460114.1;locus_tag=CCO40_RS13295;product=curli minor subunit CsgB;protein_id=WP_000791655.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2739764 2740414 . + . ID=gene-CCO40_RS13300;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=CCO40_RS13300;old_locus_tag=CCO40_13300 NZ_CP075116.1 Protein Homology CDS 2739764 2740414 . + 0 ID=cds-WP_000481519.1;Parent=gene-CCO40_RS13300;Dbxref=GenBank:WP_000481519.1;Name=WP_000481519.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460113.1;locus_tag=CCO40_RS13300;product=biofilm master transcriptional regulator CsgD;protein_id=WP_000481519.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2740419 2740814 . + . ID=gene-CCO40_RS13305;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=CCO40_RS13305;old_locus_tag=CCO40_13305 NZ_CP075116.1 Protein Homology CDS 2740419 2740814 . + 0 ID=cds-WP_000833307.1;Parent=gene-CCO40_RS13305;Dbxref=GenBank:WP_000833307.1;Name=WP_000833307.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460112.1;locus_tag=CCO40_RS13305;product=curli production assembly/transport protein CsgE;protein_id=WP_000833307.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2740841 2741257 . + . ID=gene-CCO40_RS13310;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=CCO40_RS13310;old_locus_tag=CCO40_13310 NZ_CP075116.1 Protein Homology CDS 2740841 2741257 . + 0 ID=cds-WP_001264073.1;Parent=gene-CCO40_RS13310;Dbxref=GenBank:WP_001264073.1;Name=WP_001264073.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460111.1;locus_tag=CCO40_RS13310;product=curli production assembly/transport protein CsgF;protein_id=WP_001264073.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2741284 2742117 . + . ID=gene-CCO40_RS13315;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=CCO40_RS13315;old_locus_tag=CCO40_13315 NZ_CP075116.1 Protein Homology CDS 2741284 2742117 . + 0 ID=cds-WP_001137620.1;Parent=gene-CCO40_RS13315;Dbxref=GenBank:WP_001137620.1;Name=WP_001137620.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460110.1;locus_tag=CCO40_RS13315;product=curli production assembly/transport protein CsgG;protein_id=WP_001137620.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2742156 2742638 . - . ID=gene-CCO40_RS13320;Name=CCO40_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13320;old_locus_tag=CCO40_13320 NZ_CP075116.1 Protein Homology CDS 2742156 2742638 . - 0 ID=cds-WP_001546652.1;Parent=gene-CCO40_RS13320;Dbxref=GenBank:WP_001546652.1;Name=WP_001546652.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675581.1;locus_tag=CCO40_RS13320;product=DUF1097 domain-containing protein;protein_id=WP_001546652.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2742739 2743293 . - . ID=gene-CCO40_RS13325;Name=CCO40_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13325;old_locus_tag=CCO40_13325 NZ_CP075116.1 Protein Homology CDS 2742739 2743293 . - 0 ID=cds-WP_001001883.1;Parent=gene-CCO40_RS13325;Dbxref=GenBank:WP_001001883.1;Name=WP_001001883.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460108.1;locus_tag=CCO40_RS13325;product=TorD/DmsD family molecular chaperone;protein_id=WP_001001883.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2743317 2744054 . - . ID=gene-CCO40_RS13330;Name=CCO40_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13330;old_locus_tag=CCO40_13330 NZ_CP075116.1 Protein Homology CDS 2743317 2744054 . - 0 ID=cds-WP_000283641.1;Parent=gene-CCO40_RS13330;Dbxref=GenBank:WP_000283641.1;Name=WP_000283641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460107.1;locus_tag=CCO40_RS13330;product=phosphatase;protein_id=WP_000283641.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2744139 2745077 . - . ID=gene-CCO40_RS13335;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=CCO40_RS13335;old_locus_tag=CCO40_13335 NZ_CP075116.1 Protein Homology CDS 2744139 2745077 . - 0 ID=cds-WP_000402552.1;Parent=gene-CCO40_RS13335;Dbxref=GenBank:WP_000402552.1;Name=WP_000402552.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=CCO40_RS13335;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_000402552.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2745314 2745401 . + . ID=gene-CCO40_RS13340;Name=CCO40_RS13340;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS13340;old_locus_tag=CCO40_13340 NZ_CP075116.1 tRNAscan-SE tRNA 2745314 2745401 . + . ID=rna-CCO40_RS13340;Parent=gene-CCO40_RS13340;anticodon=(pos:2745348..2745350);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS13340;product=tRNA-Ser NZ_CP075116.1 tRNAscan-SE exon 2745314 2745401 . + . ID=exon-CCO40_RS13340-1;Parent=rna-CCO40_RS13340;anticodon=(pos:2745348..2745350);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS13340;product=tRNA-Ser NZ_CP075116.1 RefSeq gene 2745451 2745586 . + . ID=gene-CCO40_RS13345;Name=CCO40_RS13345;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO40_RS13345;old_locus_tag=CCO40_13345 NZ_CP075116.1 cmsearch ncRNA 2745451 2745586 . + . ID=rna-CCO40_RS13345;Parent=gene-CCO40_RS13345;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00391,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS13345;product=RtT sRNA NZ_CP075116.1 cmsearch exon 2745451 2745586 . + . ID=exon-CCO40_RS13345-1;Parent=rna-CCO40_RS13345;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00391,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS13345;product=RtT sRNA NZ_CP075116.1 RefSeq gene 2745636 2745771 . + . ID=gene-CCO40_RS13350;Name=CCO40_RS13350;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO40_RS13350;old_locus_tag=CCO40_13350 NZ_CP075116.1 cmsearch ncRNA 2745636 2745771 . + . ID=rna-CCO40_RS13350;Parent=gene-CCO40_RS13350;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00391,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS13350;product=RtT sRNA NZ_CP075116.1 cmsearch exon 2745636 2745771 . + . ID=exon-CCO40_RS13350-1;Parent=rna-CCO40_RS13350;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00391,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS13350;product=RtT sRNA NZ_CP075116.1 RefSeq gene 2745922 2747028 . - . ID=gene-CCO40_RS13355;Name=CCO40_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13355;old_locus_tag=CCO40_13355 NZ_CP075116.1 Protein Homology CDS 2745922 2747028 . - 0 ID=cds-WP_000988589.1;Parent=gene-CCO40_RS13355;Dbxref=GenBank:WP_000988589.1;Name=WP_000988589.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460105.1;locus_tag=CCO40_RS13355;product=Gfo/Idh/MocA family protein;protein_id=WP_000988589.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2747039 2748319 . - . ID=gene-CCO40_RS13360;Name=CCO40_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13360;old_locus_tag=CCO40_13360 NZ_CP075116.1 Protein Homology CDS 2747039 2748319 . - 0 ID=cds-WP_000560758.1;Parent=gene-CCO40_RS13360;Dbxref=GenBank:WP_000560758.1;Name=WP_000560758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460104.1;locus_tag=CCO40_RS13360;product=MFS transporter;protein_id=WP_000560758.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2748602 2749294 . - . ID=gene-CCO40_RS13365;Name=CCO40_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13365;old_locus_tag=CCO40_13365 NZ_CP075116.1 Protein Homology CDS 2748602 2749294 . - 0 ID=cds-WP_000700610.1;Parent=gene-CCO40_RS13365;Dbxref=GenBank:WP_000700610.1;Name=WP_000700610.1;Ontology_term=GO:0015772,GO:0034219,GO:0015288;gbkey=CDS;go_function=porin activity|0015288||IEA;go_process=oligosaccharide transport|0015772||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460103.1;locus_tag=CCO40_RS13365;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_000700610.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2749340 2750494 . - . ID=gene-CCO40_RS13370;Name=CCO40_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13370;old_locus_tag=CCO40_13370 NZ_CP075116.1 Protein Homology CDS 2749340 2750494 . - 0 ID=cds-WP_000525755.1;Parent=gene-CCO40_RS13370;Dbxref=GenBank:WP_000525755.1;Name=WP_000525755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460102.1;locus_tag=CCO40_RS13370;product=N-acetylneuraminate epimerase;protein_id=WP_000525755.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2751000 2751680 . + . ID=gene-CCO40_RS13375;Name=CCO40_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13375;old_locus_tag=CCO40_13375 NZ_CP075116.1 Protein Homology CDS 2751000 2751680 . + 0 ID=cds-WP_000054243.1;Parent=gene-CCO40_RS13375;Dbxref=GenBank:WP_000054243.1;Name=WP_000054243.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460101.1;locus_tag=CCO40_RS13375;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054243.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2752009 2753505 . + . ID=gene-CCO40_RS13380;Name=CCO40_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13380;old_locus_tag=CCO40_13380 NZ_CP075116.1 Protein Homology CDS 2752009 2753505 . + 0 ID=cds-WP_000628085.1;Parent=gene-CCO40_RS13380;Dbxref=GenBank:WP_000628085.1;Name=WP_000628085.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460100.1;locus_tag=CCO40_RS13380;product=sodium:solute symporter family protein;protein_id=WP_000628085.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2753791 2754672 . + . ID=gene-CCO40_RS13385;Name=CCO40_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13385;old_locus_tag=CCO40_13385 NZ_CP075116.1 Protein Homology CDS 2753791 2754672 . + 0 ID=cds-WP_000433673.1;Parent=gene-CCO40_RS13385;Dbxref=GenBank:WP_000433673.1;Name=WP_000433673.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460099.1;locus_tag=CCO40_RS13385;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000433673.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2754778 2755566 . - . ID=gene-CCO40_RS13390;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=CCO40_RS13390;old_locus_tag=CCO40_13390 NZ_CP075116.1 Protein Homology CDS 2754778 2755566 . - 0 ID=cds-WP_000533527.1;Parent=gene-CCO40_RS13390;Dbxref=GenBank:WP_000533527.1;Name=WP_000533527.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=CCO40_RS13390;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000533527.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2756459 2757967 . - . ID=gene-CCO40_RS13395;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=CCO40_RS13395;old_locus_tag=CCO40_13395 NZ_CP075116.1 Protein Homology CDS 2756459 2757967 . - 0 ID=cds-WP_001018467.1;Parent=gene-CCO40_RS13395;Dbxref=GenBank:WP_001018467.1;Name=WP_001018467.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460097.1;locus_tag=CCO40_RS13395;product=sodium/proline symporter PutP;protein_id=WP_001018467.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2758389 2762351 . + . ID=gene-CCO40_RS13400;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=CCO40_RS13400;old_locus_tag=CCO40_13400 NZ_CP075116.1 Protein Homology CDS 2758389 2762351 . + 0 ID=cds-WP_000537513.1;Parent=gene-CCO40_RS13400;Dbxref=GenBank:WP_000537513.1;Name=WP_000537513.1;Ontology_term=GO:0006355,GO:0055129,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,L-glutamate gamma-semialdehyde dehydrogenase (NAD+) activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=CCO40_RS13400;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_000537513.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2762410 2762805 . + . ID=gene-CCO40_RS13405;Name=CCO40_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13405;old_locus_tag=CCO40_13405 NZ_CP075116.1 Protein Homology CDS 2762410 2762805 . + 0 ID=cds-WP_000821068.1;Parent=gene-CCO40_RS13405;Dbxref=GenBank:WP_000821068.1;Name=WP_000821068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460095.1;locus_tag=CCO40_RS13405;product=lysozyme inhibitor LprI family protein;protein_id=WP_000821068.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2762802 2763440 . - . ID=gene-CCO40_RS13410;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=CCO40_RS13410;old_locus_tag=CCO40_13410 NZ_CP075116.1 Protein Homology CDS 2762802 2763440 . - 0 ID=cds-WP_000083128.1;Parent=gene-CCO40_RS13410;Dbxref=GenBank:WP_000083128.1;Name=WP_000083128.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460094.1;locus_tag=CCO40_RS13410;product=HTH-type transcriptional regulator RutR;protein_id=WP_000083128.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2763577 2763744 . - . ID=gene-CCO40_RS13415;Name=CCO40_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13415;old_locus_tag=CCO40_13415 NZ_CP075116.1 Protein Homology CDS 2763577 2763744 . - 0 ID=cds-WP_001273663.1;Parent=gene-CCO40_RS13415;Dbxref=GenBank:WP_001273663.1;Name=WP_001273663.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460093.1;locus_tag=CCO40_RS13415;product=con-10 family general stress protein;protein_id=WP_001273663.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2764129 2764725 . + . ID=gene-CCO40_RS13420;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=CCO40_RS13420;old_locus_tag=CCO40_13420 NZ_CP075116.1 Protein Homology CDS 2764129 2764725 . + 0 ID=cds-WP_001062898.1;Parent=gene-CCO40_RS13420;Dbxref=GenBank:WP_001062898.1;Name=WP_001062898.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=CCO40_RS13420;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001062898.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2764746 2764973 . + . ID=gene-CCO40_RS13425;Name=CCO40_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13425;old_locus_tag=CCO40_13425 NZ_CP075116.1 Protein Homology CDS 2764746 2764973 . + 0 ID=cds-WP_001143125.1;Parent=gene-CCO40_RS13425;Dbxref=GenBank:WP_001143125.1;Name=WP_001143125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=CCO40_RS13425;product=YccJ family protein;protein_id=WP_001143125.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2765007 2766248 . - . ID=gene-CCO40_RS13430;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=CCO40_RS13430;old_locus_tag=CCO40_13430 NZ_CP075116.1 Protein Homology CDS 2765007 2766248 . - 0 ID=cds-WP_000749206.1;Parent=gene-CCO40_RS13430;Dbxref=GenBank:WP_000749206.1;Name=WP_000749206.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=CCO40_RS13430;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_000749206.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2766381 2766887 . - . ID=gene-CCO40_RS13435;Name=CCO40_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13435;old_locus_tag=CCO40_13435 NZ_CP075116.1 Protein Homology CDS 2766381 2766887 . - 0 ID=cds-WP_000907528.1;Parent=gene-CCO40_RS13435;Dbxref=GenBank:WP_000907528.1;Name=WP_000907528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460089.1;locus_tag=CCO40_RS13435;product=protein disulfide oxidoreductase;protein_id=WP_000907528.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2766877 2767500 . - . ID=gene-CCO40_RS13440;Name=CCO40_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13440;old_locus_tag=CCO40_13440 NZ_CP075116.1 Protein Homology CDS 2766877 2767500 . - 0 ID=cds-WP_000876682.1;Parent=gene-CCO40_RS13440;Dbxref=GenBank:WP_000876682.1;Name=WP_000876682.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460088.1;locus_tag=CCO40_RS13440;product=DsbA family protein;protein_id=WP_000876682.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2767497 2769383 . - . ID=gene-CCO40_RS13445;Name=CCO40_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13445;old_locus_tag=CCO40_13445 NZ_CP075116.1 Protein Homology CDS 2767497 2769383 . - 0 ID=cds-WP_000972970.1;Parent=gene-CCO40_RS13445;Dbxref=GenBank:WP_000972970.1;Name=WP_000972970.1;Ontology_term=GO:0009055,GO:0015036;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460087.1;locus_tag=CCO40_RS13445;product=protein-disulfide reductase DsbD family protein;protein_id=WP_000972970.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2769432 2769794 . - . ID=gene-CCO40_RS13450;Name=CCO40_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13450;old_locus_tag=CCO40_13450 NZ_CP075116.1 Protein Homology CDS 2769432 2769794 . - 0 ID=cds-WP_001118902.1;Parent=gene-CCO40_RS13450;Dbxref=GenBank:WP_001118902.1;Name=WP_001118902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460086.1;locus_tag=CCO40_RS13450;product=copper resistance protein;protein_id=WP_001118902.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2770030 2770950 . + . ID=gene-CCO40_RS13455;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=CCO40_RS13455;old_locus_tag=CCO40_13455 NZ_CP075116.1 Protein Homology CDS 2770030 2770950 . + 0 ID=cds-WP_000420603.1;Parent=gene-CCO40_RS13455;Dbxref=GenBank:WP_000420603.1;Name=WP_000420603.1;Ontology_term=GO:0006457;gbkey=CDS;gene=cbpA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460085.1;locus_tag=CCO40_RS13455;product=curved DNA-binding protein;protein_id=WP_000420603.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2770950 2771255 . + . ID=gene-CCO40_RS13460;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=CCO40_RS13460;old_locus_tag=CCO40_13460 NZ_CP075116.1 Protein Homology CDS 2770950 2771255 . + 0 ID=cds-WP_001284251.1;Parent=gene-CCO40_RS13460;Dbxref=GenBank:WP_001284251.1;Name=WP_001284251.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460084.1;locus_tag=CCO40_RS13460;product=chaperone modulator CbpM;protein_id=WP_001284251.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2771909 2772271 . + . ID=gene-CCO40_RS13465;Name=CCO40_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13465;old_locus_tag=CCO40_13465 NZ_CP075116.1 Protein Homology CDS 2771909 2772271 . + 0 ID=cds-WP_001537781.1;Parent=gene-CCO40_RS13465;Dbxref=GenBank:WP_001537781.1;Name=WP_001537781.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=CCO40_RS13465;product=anti-adapter protein IraM;protein_id=WP_001537781.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2772679 2773617 . - . ID=gene-CCO40_RS13470;Name=CCO40_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13470;old_locus_tag=CCO40_13470 NZ_CP075116.1 Protein Homology CDS 2772679 2773617 . - 0 ID=cds-WP_000976561.1;Parent=gene-CCO40_RS13470;Dbxref=GenBank:WP_000976561.1;Name=WP_000976561.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460082.1;locus_tag=CCO40_RS13470;product=MBL fold metallo-hydrolase;protein_id=WP_000976561.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2773631 2774527 . - . ID=gene-CCO40_RS13475;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=CCO40_RS13475;old_locus_tag=CCO40_13475 NZ_CP075116.1 Protein Homology CDS 2773631 2774527 . - 0 ID=cds-WP_000336602.1;Parent=gene-CCO40_RS13475;Dbxref=GenBank:WP_000336602.1;Name=WP_000336602.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460081.1;locus_tag=CCO40_RS13475;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_000336602.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2774537 2775913 . - . ID=gene-CCO40_RS13480;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=CCO40_RS13480;old_locus_tag=CCO40_13480 NZ_CP075116.1 Protein Homology CDS 2774537 2775913 . - 0 ID=cds-WP_001285803.1;Parent=gene-CCO40_RS13480;Dbxref=GenBank:WP_001285803.1;Name=WP_001285803.1;Ontology_term=GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=CCO40_RS13480;product=4-hydroxyphenylacetate permease;protein_id=WP_001285803.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2775985 2776776 . - . ID=gene-CCO40_RS13485;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=CCO40_RS13485;old_locus_tag=CCO40_13485 NZ_CP075116.1 Protein Homology CDS 2775985 2776776 . - 0 ID=cds-WP_000785073.1;Parent=gene-CCO40_RS13485;Dbxref=GenBank:WP_000785073.1;Name=WP_000785073.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460079.1;locus_tag=CCO40_RS13485;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_000785073.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2776787 2777590 . - . ID=gene-CCO40_RS13490;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=CCO40_RS13490;old_locus_tag=CCO40_13490 NZ_CP075116.1 Protein Homology CDS 2776787 2777590 . - 0 ID=cds-WP_000884795.1;Parent=gene-CCO40_RS13490;Dbxref=GenBank:WP_000884795.1;Name=WP_000884795.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460078.1;locus_tag=CCO40_RS13490;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_000884795.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2777734 2778114 . - . ID=gene-CCO40_RS13495;Name=CCO40_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13495;old_locus_tag=CCO40_13495 NZ_CP075116.1 Protein Homology CDS 2777734 2778114 . - 0 ID=cds-WP_001119849.1;Parent=gene-CCO40_RS13495;Dbxref=GenBank:WP_001119849.1;Name=WP_001119849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=CCO40_RS13495;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_001119849.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2778124 2778975 . - . ID=gene-CCO40_RS13500;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=CCO40_RS13500;old_locus_tag=CCO40_13500 NZ_CP075116.1 Protein Homology CDS 2778124 2778975 . - 0 ID=cds-WP_000516978.1;Parent=gene-CCO40_RS13500;Dbxref=GenBank:WP_000516978.1;Name=WP_000516978.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=CCO40_RS13500;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_000516978.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2778977 2780443 . - . ID=gene-CCO40_RS13505;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=CCO40_RS13505;old_locus_tag=CCO40_13505 NZ_CP075116.1 Protein Homology CDS 2778977 2780443 . - 0 ID=cds-WP_000723529.1;Parent=gene-CCO40_RS13505;Dbxref=GenBank:WP_000723529.1;Name=WP_000723529.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase (NAD+) activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=CCO40_RS13505;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_000723529.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2780440 2781729 . - . ID=gene-CCO40_RS13510;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=CCO40_RS13510;old_locus_tag=CCO40_13510 NZ_CP075116.1 Protein Homology CDS 2780440 2781729 . - 0 ID=cds-WP_000679210.1;Parent=gene-CCO40_RS13510;Dbxref=GenBank:WP_000679210.1;Name=WP_000679210.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=CCO40_RS13510;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WP_000679210.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2782004 2782444 . + . ID=gene-CCO40_RS13515;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=CCO40_RS13515;old_locus_tag=CCO40_13515 NZ_CP075116.1 Protein Homology CDS 2782004 2782444 . + 0 ID=cds-WP_000543922.1;Parent=gene-CCO40_RS13515;Dbxref=GenBank:WP_000543922.1;Name=WP_000543922.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460073.1;locus_tag=CCO40_RS13515;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_000543922.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2782662 2784224 . + . ID=gene-CCO40_RS13520;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=CCO40_RS13520;old_locus_tag=CCO40_13520 NZ_CP075116.1 Protein Homology CDS 2782662 2784224 . + 0 ID=cds-WP_000801496.1;Parent=gene-CCO40_RS13520;Dbxref=GenBank:WP_000801496.1;Name=WP_000801496.1;Ontology_term=GO:0010124,GO:0016712,GO:0050660;gbkey=CDS;gene=hpaB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C reduced flavin or flavoprotein as one donor%2C and incorporation of one atom of oxygen|0016712||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=CCO40_RS13520;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_000801496.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2784242 2784754 . + . ID=gene-CCO40_RS13525;Name=CCO40_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13525;old_locus_tag=CCO40_13525 NZ_CP075116.1 Protein Homology CDS 2784242 2784754 . + 0 ID=cds-WP_001195551.1;Parent=gene-CCO40_RS13525;Dbxref=GenBank:WP_001195551.1;Name=WP_001195551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460071.1;locus_tag=CCO40_RS13525;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WP_001195551.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2785087 2785497 . - . ID=gene-CCO40_RS13530;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=CCO40_RS13530;old_locus_tag=CCO40_13530 NZ_CP075116.1 Protein Homology CDS 2785087 2785497 . - 0 ID=cds-WP_000833182.1;Parent=gene-CCO40_RS13530;Dbxref=GenBank:WP_000833182.1;Name=WP_000833182.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460070.1;locus_tag=CCO40_RS13530;product=hydroxyisourate hydrolase;protein_id=WP_000833182.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2785633 2786313 . + . ID=gene-CCO40_RS13535;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=CCO40_RS13535;old_locus_tag=CCO40_13535 NZ_CP075116.1 Protein Homology CDS 2785633 2786313 . + 0 ID=cds-WP_000698207.1;Parent=gene-CCO40_RS13535;Dbxref=GenBank:WP_000698207.1;Name=WP_000698207.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698203.1;locus_tag=CCO40_RS13535;product=response regulator transcription factor HprR;protein_id=WP_000698207.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2786306 2787670 . + . ID=gene-CCO40_RS13540;Name=CCO40_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13540;old_locus_tag=CCO40_13540 NZ_CP075116.1 Protein Homology CDS 2786306 2787670 . + 0 ID=cds-WP_000240031.1;Parent=gene-CCO40_RS13540;Dbxref=GenBank:WP_000240031.1;Name=WP_000240031.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447527.1;locus_tag=CCO40_RS13540;product=heavy metal sensor histidine kinase;protein_id=WP_000240031.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2787843 2789312 . + . ID=gene-CCO40_RS13545;Name=CCO40_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13545;old_locus_tag=CCO40_13545 NZ_CP075116.1 Protein Homology CDS 2787843 2789312 . + 0 ID=cds-WP_000760226.1;Parent=gene-CCO40_RS13545;Dbxref=GenBank:WP_000760226.1;Name=WP_000760226.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460067.1;locus_tag=CCO40_RS13545;product=C69 family dipeptidase;protein_id=WP_000760226.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2789421 2789531 . + . ID=gene-CCO40_RS13550;Name=CCO40_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13550;old_locus_tag=CCO40_13550 NZ_CP075116.1 Protein Homology CDS 2789421 2789531 . + 0 ID=cds-WP_000174813.1;Parent=gene-CCO40_RS13550;Dbxref=GenBank:WP_000174813.1;Name=WP_000174813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=CCO40_RS13550;product=hypothetical protein;protein_id=WP_000174813.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2789532 2789702 . - . ID=gene-CCO40_RS13555;Name=CCO40_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13555;old_locus_tag=CCO40_13555 NZ_CP075116.1 Protein Homology CDS 2789532 2789702 . - 0 ID=cds-WP_001111006.1;Parent=gene-CCO40_RS13555;Dbxref=GenBank:WP_001111006.1;Name=WP_001111006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460065.1;locus_tag=CCO40_RS13555;product=YlcI/YnfO family protein;protein_id=WP_001111006.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2790035 2791720 . + . ID=gene-CCO40_RS13560;Name=sopB;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;locus_tag=CCO40_RS13560;old_locus_tag=CCO40_13560 NZ_CP075116.1 Protein Homology CDS 2790035 2791720 . + 0 ID=cds-WP_001166953.1;Parent=gene-CCO40_RS13560;Dbxref=GenBank:WP_001166953.1;Name=WP_001166953.1;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460064.1;locus_tag=CCO40_RS13560;product=SPI-1 type III secretion system effector inositol phosphate phosphatase SopB;protein_id=WP_001166953.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2791737 2792078 . + . ID=gene-CCO40_RS13565;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=CCO40_RS13565;old_locus_tag=CCO40_13565 NZ_CP075116.1 Protein Homology CDS 2791737 2792078 . + 0 ID=cds-WP_000444720.1;Parent=gene-CCO40_RS13565;Dbxref=GenBank:WP_000444720.1;Name=WP_000444720.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460063.1;locus_tag=CCO40_RS13565;product=type III secretion system chaperone SigE;protein_id=WP_000444720.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2792088 2792408 . - . ID=gene-CCO40_RS13570;Name=CCO40_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13570;old_locus_tag=CCO40_13570 NZ_CP075116.1 Protein Homology CDS 2792088 2792408 . - 0 ID=cds-WP_077907596.1;Parent=gene-CCO40_RS13570;Dbxref=GenBank:WP_077907596.1;Name=WP_077907596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=CCO40_RS13570;product=hypothetical protein;protein_id=WP_077907596.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2792626 2793501 . + . ID=gene-CCO40_RS13575;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=CCO40_RS13575;old_locus_tag=CCO40_13575 NZ_CP075116.1 Protein Homology CDS 2792626 2793501 . + 0 ID=cds-WP_001123026.1;Parent=gene-CCO40_RS13575;Dbxref=GenBank:WP_001123026.1;Name=WP_001123026.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460061.1;locus_tag=CCO40_RS13575;product=SPI-2 type III secretion system effector PipB;protein_id=WP_001123026.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2793723 2794403 . + . ID=gene-CCO40_RS13580;Name=pipA;gbkey=Gene;gene=pipA;gene_biotype=protein_coding;locus_tag=CCO40_RS13580;old_locus_tag=CCO40_13580 NZ_CP075116.1 Protein Homology CDS 2793723 2794403 . + 0 ID=cds-WP_000938191.1;Parent=gene-CCO40_RS13580;Dbxref=GenBank:WP_000938191.1;Name=WP_000938191.1;gbkey=CDS;gene=pipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460060.1;locus_tag=CCO40_RS13580;product=type III secretion system effector protease PipA;protein_id=WP_000938191.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2794560 2794647 . - . ID=gene-CCO40_RS13585;Name=CCO40_RS13585;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS13585;old_locus_tag=CCO40_13585 NZ_CP075116.1 tRNAscan-SE tRNA 2794560 2794647 . - . ID=rna-CCO40_RS13585;Parent=gene-CCO40_RS13585;anticodon=(pos:complement(2794611..2794613));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS13585;product=tRNA-Ser NZ_CP075116.1 tRNAscan-SE exon 2794560 2794647 . - . ID=exon-CCO40_RS13585-1;Parent=rna-CCO40_RS13585;anticodon=(pos:complement(2794611..2794613));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS13585;product=tRNA-Ser NZ_CP075116.1 RefSeq gene 2795042 2795701 . + . ID=gene-CCO40_RS13590;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=CCO40_RS13590;old_locus_tag=CCO40_13590 NZ_CP075116.1 Protein Homology CDS 2795042 2795701 . + 0 ID=cds-WP_000374046.1;Parent=gene-CCO40_RS13590;Dbxref=GenBank:WP_000374046.1;Name=WP_000374046.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=CCO40_RS13590;product=FtsH protease modulator YccA;protein_id=WP_000374046.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2795788 2796117 . + . ID=gene-CCO40_RS13595;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=CCO40_RS13595;old_locus_tag=CCO40_13595 NZ_CP075116.1 Protein Homology CDS 2795788 2796117 . + 0 ID=cds-WP_000904446.1;Parent=gene-CCO40_RS13595;Dbxref=GenBank:WP_000904446.1;Name=WP_000904446.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460058.1;locus_tag=CCO40_RS13595;product=sulfurtransferase TusE;protein_id=WP_000904446.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2796114 2796395 . - . ID=gene-CCO40_RS13600;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=CCO40_RS13600;old_locus_tag=CCO40_13600 NZ_CP075116.1 Protein Homology CDS 2796114 2796395 . - 0 ID=cds-WP_000072884.1;Parent=gene-CCO40_RS13600;Dbxref=GenBank:WP_000072884.1;Name=WP_000072884.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460057.1;locus_tag=CCO40_RS13600;product=acylphosphatase;protein_id=WP_000072884.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2796444 2797223 . - . ID=gene-CCO40_RS13605;Name=CCO40_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13605;old_locus_tag=CCO40_13605 NZ_CP075116.1 Protein Homology CDS 2796444 2797223 . - 0 ID=cds-WP_000548082.1;Parent=gene-CCO40_RS13605;Dbxref=GenBank:WP_000548082.1;Name=WP_000548082.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=CCO40_RS13605;product=helix-turn-helix transcriptional regulator;protein_id=WP_000548082.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2797249 2797797 . - . ID=gene-CCO40_RS13610;Name=CCO40_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13610;old_locus_tag=CCO40_13610 NZ_CP075116.1 Protein Homology CDS 2797249 2797797 . - 0 ID=cds-WP_000859416.1;Parent=gene-CCO40_RS13610;Dbxref=GenBank:WP_000859416.1;Name=WP_000859416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=CCO40_RS13610;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_000859416.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2798012 2799223 . + . ID=gene-CCO40_RS13615;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=CCO40_RS13615;old_locus_tag=CCO40_13615 NZ_CP075116.1 Protein Homology CDS 2798012 2799223 . + 0 ID=cds-WP_000140480.1;Parent=gene-CCO40_RS13615;Dbxref=GenBank:WP_000140480.1;Name=WP_000140480.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=CCO40_RS13615;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_000140480.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2799281 2799598 . + . ID=gene-CCO40_RS13620;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=CCO40_RS13620;old_locus_tag=CCO40_13620 NZ_CP075116.1 Protein Homology CDS 2799281 2799598 . + 0 ID=cds-WP_000561983.1;Parent=gene-CCO40_RS13620;Dbxref=GenBank:WP_000561983.1;Name=WP_000561983.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=CCO40_RS13620;product=heat shock protein HspQ;protein_id=WP_000561983.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2799643 2800056 . - . ID=gene-CCO40_RS13625;Name=CCO40_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13625;old_locus_tag=CCO40_13625 NZ_CP075116.1 Protein Homology CDS 2799643 2800056 . - 0 ID=cds-WP_001537782.1;Parent=gene-CCO40_RS13625;Dbxref=GenBank:WP_001537782.1;Name=WP_001537782.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=CCO40_RS13625;product=CoA-binding protein;protein_id=WP_001537782.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2800230 2800892 . + . ID=gene-CCO40_RS13630;Name=CCO40_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13630;old_locus_tag=CCO40_13630 NZ_CP075116.1 Protein Homology CDS 2800230 2800892 . + 0 ID=cds-WP_000847719.1;Parent=gene-CCO40_RS13630;Dbxref=GenBank:WP_000847719.1;Name=WP_000847719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460051.1;locus_tag=CCO40_RS13630;product=DUF2057 family protein;protein_id=WP_000847719.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2800987 2801445 . + . ID=gene-CCO40_RS13635;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=CCO40_RS13635;old_locus_tag=CCO40_13635 NZ_CP075116.1 Protein Homology CDS 2800987 2801445 . + 0 ID=cds-WP_000424187.1;Parent=gene-CCO40_RS13635;Dbxref=GenBank:WP_000424187.1;Name=WP_000424187.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460050.1;locus_tag=CCO40_RS13635;product=methylglyoxal synthase;protein_id=WP_000424187.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2801481 2803535 . - . ID=gene-CCO40_RS13640;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=CCO40_RS13640;old_locus_tag=CCO40_13640 NZ_CP075116.1 Protein Homology CDS 2801481 2803535 . - 0 ID=cds-WP_000420505.1;Parent=gene-CCO40_RS13640;Dbxref=GenBank:WP_000420505.1;Name=WP_000420505.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=CCO40_RS13640;product=DNA helicase IV;protein_id=WP_000420505.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2803659 2804105 . + . ID=gene-CCO40_RS13645;Name=CCO40_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13645;old_locus_tag=CCO40_13645 NZ_CP075116.1 Protein Homology CDS 2803659 2804105 . + 0 ID=cds-WP_001261222.1;Parent=gene-CCO40_RS13645;Dbxref=GenBank:WP_001261222.1;Name=WP_001261222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460048.1;locus_tag=CCO40_RS13645;product=YccF domain-containing protein;protein_id=WP_001261222.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2804124 2806277 . + . ID=gene-CCO40_RS13650;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=CCO40_RS13650;old_locus_tag=CCO40_13650 NZ_CP075116.1 Protein Homology CDS 2804124 2806277 . + 0 ID=cds-WP_000950880.1;Parent=gene-CCO40_RS13650;Dbxref=GenBank:WP_000950880.1;Name=WP_000950880.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460047.1;locus_tag=CCO40_RS13650;product=YccS family putative transporter;protein_id=WP_000950880.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2806264 2806869 . - . ID=gene-CCO40_RS13655;Name=CCO40_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13655;old_locus_tag=CCO40_13655 NZ_CP075116.1 Protein Homology CDS 2806264 2806869 . - 0 ID=cds-WP_001202375.1;Parent=gene-CCO40_RS13655;Dbxref=GenBank:WP_001202375.1;Name=WP_001202375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=CCO40_RS13655;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_001202375.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2807086 2807595 . + . ID=gene-CCO40_RS13660;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=CCO40_RS13660;old_locus_tag=CCO40_13660 NZ_CP075116.1 Protein Homology CDS 2807086 2807595 . + 0 ID=cds-WP_000288732.1;Parent=gene-CCO40_RS13660;Dbxref=GenBank:WP_000288732.1;Name=WP_000288732.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460045.1;locus_tag=CCO40_RS13660;product=SOS-induced cell division inhibitor SulA;protein_id=WP_000288732.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2807952 2809004 . + . ID=gene-CCO40_RS13665;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=CCO40_RS13665;old_locus_tag=CCO40_13665 NZ_CP075116.1 Protein Homology CDS 2807952 2809004 . + 0 ID=cds-WP_001674965.1;Parent=gene-CCO40_RS13665;Dbxref=GenBank:WP_001674965.1;Name=WP_001674965.1;Ontology_term=GO:0015288;gbkey=CDS;gene=ompA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460044.1;locus_tag=CCO40_RS13665;product=porin OmpA;protein_id=WP_001674965.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2809076 2809528 . - . ID=gene-CCO40_RS13670;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=CCO40_RS13670;old_locus_tag=CCO40_13670 NZ_CP075116.1 Protein Homology CDS 2809076 2809528 . - 0 ID=cds-WP_000877172.1;Parent=gene-CCO40_RS13670;Dbxref=GenBank:WP_000877172.1;Name=WP_000877172.1;Ontology_term=GO:0006274,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=CCO40_RS13670;product=macrodomain Ter protein MatP;protein_id=WP_000877172.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2809714 2811474 . + . ID=gene-CCO40_RS13675;Name=CCO40_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13675;old_locus_tag=CCO40_13675 NZ_CP075116.1 Protein Homology CDS 2809714 2811474 . + 0 ID=cds-WP_000156454.1;Parent=gene-CCO40_RS13675;Dbxref=GenBank:WP_000156454.1;Name=WP_000156454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460042.1;locus_tag=CCO40_RS13675;product=AAA family ATPase;protein_id=WP_000156454.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2811543 2812061 . + . ID=gene-CCO40_RS13680;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=CCO40_RS13680;old_locus_tag=CCO40_13680 NZ_CP075116.1 Protein Homology CDS 2811543 2812061 . + 0 ID=cds-WP_000227928.1;Parent=gene-CCO40_RS13680;Dbxref=GenBank:WP_000227928.1;Name=WP_000227928.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=CCO40_RS13680;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227928.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2812161 2812328 . - . ID=gene-CCO40_RS13685;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=CCO40_RS13685;old_locus_tag=CCO40_13685 NZ_CP075116.1 Protein Homology CDS 2812161 2812328 . - 0 ID=cds-WP_001537784.1;Parent=gene-CCO40_RS13685;Dbxref=GenBank:WP_001537784.1;Name=WP_001537784.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=cytosolic ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=CCO40_RS13685;product=ribosome modulation factor;protein_id=WP_001537784.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2812584 2813147 . - . ID=gene-CCO40_RS13690;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=CCO40_RS13690;old_locus_tag=CCO40_13690 NZ_CP075116.1 Protein Homology CDS 2812584 2813147 . - 0 ID=cds-WP_000759136.1;Parent=gene-CCO40_RS13690;Dbxref=GenBank:WP_000759136.1;Name=WP_000759136.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460039.1;locus_tag=CCO40_RS13690;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759136.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2813144 2814784 . - . ID=gene-CCO40_RS13695;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=CCO40_RS13695;old_locus_tag=CCO40_13695 NZ_CP075116.1 Protein Homology CDS 2813144 2814784 . - 0 ID=cds-WP_000433414.1;Parent=gene-CCO40_RS13695;Dbxref=GenBank:WP_000433414.1;Name=WP_000433414.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=CCO40_RS13695;product=intermembrane transport protein PqiB;protein_id=WP_000433414.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2814789 2816042 . - . ID=gene-CCO40_RS13700;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=CCO40_RS13700;old_locus_tag=CCO40_13700 NZ_CP075116.1 Protein Homology CDS 2814789 2816042 . - 0 ID=cds-WP_000333152.1;Parent=gene-CCO40_RS13700;Dbxref=GenBank:WP_000333152.1;Name=WP_000333152.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460037.1;locus_tag=CCO40_RS13700;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_000333152.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2816057 2817964 . - . ID=gene-CCO40_RS13705;Name=CCO40_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13705;old_locus_tag=CCO40_13705 NZ_CP075116.1 Protein Homology CDS 2816057 2817964 . - 0 ID=cds-WP_000053044.1;Parent=gene-CCO40_RS13705;Dbxref=GenBank:WP_000053044.1;Name=WP_000053044.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=CCO40_RS13705;product=ABC transporter ATP-binding protein;protein_id=WP_000053044.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2817977 2820085 . - . ID=gene-CCO40_RS13710;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=CCO40_RS13710;old_locus_tag=CCO40_13710 NZ_CP075116.1 Protein Homology CDS 2817977 2820085 . - 0 ID=cds-WP_001086485.1;Parent=gene-CCO40_RS13710;Dbxref=GenBank:WP_001086485.1;Name=WP_001086485.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=CCO40_RS13710;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_001086485.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2820184 2821293 . + . ID=gene-CCO40_RS13715;Name=CCO40_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13715;old_locus_tag=CCO40_13715 NZ_CP075116.1 Protein Homology CDS 2820184 2821293 . + 0 ID=cds-WP_000224069.1;Parent=gene-CCO40_RS13715;Dbxref=GenBank:WP_000224069.1;Name=WP_000224069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460034.1;locus_tag=CCO40_RS13715;product=YcbX family protein;protein_id=WP_000224069.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2821290 2821832 . - . ID=gene-CCO40_RS13720;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=CCO40_RS13720;old_locus_tag=CCO40_13720 NZ_CP075116.1 Protein Homology CDS 2821290 2821832 . - 0 ID=cds-WP_001220671.1;Parent=gene-CCO40_RS13720;Dbxref=GenBank:WP_001220671.1;Name=WP_001220671.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=CCO40_RS13720;product=cell division protein ZapC;protein_id=WP_001220671.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2821998 2823008 . - . ID=gene-CCO40_RS13725;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=CCO40_RS13725;old_locus_tag=CCO40_13725 NZ_CP075116.1 Protein Homology CDS 2821998 2823008 . - 0 ID=cds-WP_000291723.1;Parent=gene-CCO40_RS13725;Dbxref=GenBank:WP_000291723.1;Name=WP_000291723.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=CCO40_RS13725;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_000291723.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2823216 2825828 . - . ID=gene-CCO40_RS13730;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=CCO40_RS13730;old_locus_tag=CCO40_13730 NZ_CP075116.1 Protein Homology CDS 2823216 2825828 . - 0 ID=cds-WP_000193784.1;Parent=gene-CCO40_RS13730;Dbxref=GenBank:WP_000193784.1;Name=WP_000193784.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=CCO40_RS13730;product=aminopeptidase N;protein_id=WP_000193784.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2826095 2827297 . + . ID=gene-CCO40_RS13735;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=CCO40_RS13735;old_locus_tag=CCO40_13735 NZ_CP075116.1 Protein Homology CDS 2826095 2827297 . + 0 ID=cds-WP_000191413.1;Parent=gene-CCO40_RS13735;Dbxref=GenBank:WP_000191413.1;Name=WP_000191413.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459979.1;locus_tag=CCO40_RS13735;product=nicotinate phosphoribosyltransferase;protein_id=WP_000191413.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 2827378 2828812 . - . ID=gene-CCO40_RS13740;Name=CCO40_RS13740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS13740;old_locus_tag=CCO40_13740;pseudo=true NZ_CP075116.1 Protein Homology CDS 2827378 2828812 . - 0 ID=cds-CCO40_RS13740;Parent=gene-CCO40_RS13740;Note=frameshifted;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524705.1;locus_tag=CCO40_RS13740;product=alanine/glycine:cation symporter family protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 2829057 2830271 . - . ID=gene-CCO40_RS13745;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=CCO40_RS13745;old_locus_tag=CCO40_13745 NZ_CP075116.1 Protein Homology CDS 2829057 2830271 . - 0 ID=cds-WP_000544849.1;Parent=gene-CCO40_RS13745;Dbxref=GenBank:WP_000544849.1;Name=WP_000544849.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459977.1;locus_tag=CCO40_RS13745;product=diaminopropionate ammonia-lyase;protein_id=WP_000544849.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2830588 2831049 . + . ID=gene-CCO40_RS13750;Name=CCO40_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13750;old_locus_tag=CCO40_13750 NZ_CP075116.1 Protein Homology CDS 2830588 2831049 . + 0 ID=cds-WP_000762342.1;Parent=gene-CCO40_RS13750;Dbxref=GenBank:WP_000762342.1;Name=WP_000762342.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459976.1;locus_tag=CCO40_RS13750;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_000762342.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2831250 2832650 . + . ID=gene-CCO40_RS13755;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=CCO40_RS13755;old_locus_tag=CCO40_13755 NZ_CP075116.1 Protein Homology CDS 2831250 2832650 . + 0 ID=cds-WP_000117870.1;Parent=gene-CCO40_RS13755;Dbxref=GenBank:WP_000117870.1;Name=WP_000117870.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=CCO40_RS13755;product=asparagine--tRNA ligase;protein_id=WP_000117870.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2833257 2834348 . + . ID=gene-CCO40_RS13760;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=CCO40_RS13760;old_locus_tag=CCO40_13760 NZ_CP075116.1 Protein Homology CDS 2833257 2834348 . + 0 ID=cds-WP_000977713.1;Parent=gene-CCO40_RS13760;Dbxref=GenBank:WP_000977713.1;Name=WP_000977713.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459974.1;locus_tag=CCO40_RS13760;product=porin OmpF;protein_id=WP_000977713.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2834533 2835723 . + . ID=gene-CCO40_RS13765;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=CCO40_RS13765;old_locus_tag=CCO40_13765 NZ_CP075116.1 Protein Homology CDS 2834533 2835723 . + 0 ID=cds-WP_000462653.1;Parent=gene-CCO40_RS13765;Dbxref=GenBank:WP_000462653.1;Name=WP_000462653.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=CCO40_RS13765;product=aspartate transaminase;protein_id=WP_000462653.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2835785 2836432 . - . ID=gene-CCO40_RS13770;Name=CCO40_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13770;old_locus_tag=CCO40_13770 NZ_CP075116.1 Protein Homology CDS 2835785 2836432 . - 0 ID=cds-WP_001109471.1;Parent=gene-CCO40_RS13770;Dbxref=GenBank:WP_001109471.1;Name=WP_001109471.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=CCO40_RS13770;product=MBL fold metallo-hydrolase;protein_id=WP_001109471.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2836460 2837008 . - . ID=gene-CCO40_RS13775;Name=mepK;gbkey=Gene;gene=mepK;gene_biotype=protein_coding;locus_tag=CCO40_RS13775;old_locus_tag=CCO40_13775 NZ_CP075116.1 Protein Homology CDS 2836460 2837008 . - 0 ID=cds-WP_000357052.1;Parent=gene-CCO40_RS13775;Dbxref=GenBank:WP_000357052.1;Name=WP_000357052.1;Ontology_term=GO:0006508,GO:0009254,GO:0071555,GO:0004175,GO:0008237,GO:0046872;gbkey=CDS;gene=mepK;go_function=endopeptidase activity|0004175||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA,peptidoglycan turnover|0009254||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=CCO40_RS13775;product=peptidoglycan L%2CD-endopeptidase MepK;protein_id=WP_000357052.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2837268 2839088 . - . ID=gene-CCO40_RS13780;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;gene_synonym=ycbB;locus_tag=CCO40_RS13780;old_locus_tag=CCO40_13780 NZ_CP075116.1 Protein Homology CDS 2837268 2839088 . - 0 ID=cds-WP_000925883.1;Parent=gene-CCO40_RS13780;Dbxref=GenBank:WP_000925883.1;Name=WP_000925883.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=CCO40_RS13780;product=L%2CD-transpeptidase;protein_id=WP_000925883.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2839433 2843899 . - . ID=gene-CCO40_RS13785;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=CCO40_RS13785;old_locus_tag=CCO40_13785 NZ_CP075116.1 Protein Homology CDS 2839433 2843899 . - 0 ID=cds-WP_000572738.1;Parent=gene-CCO40_RS13785;Dbxref=GenBank:WP_000572738.1;Name=WP_000572738.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=CCO40_RS13785;product=chromosome partition protein MukB;protein_id=WP_000572738.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2843899 2844603 . - . ID=gene-CCO40_RS13790;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=CCO40_RS13790;old_locus_tag=CCO40_13790 NZ_CP075116.1 Protein Homology CDS 2843899 2844603 . - 0 ID=cds-WP_000060025.1;Parent=gene-CCO40_RS13790;Dbxref=GenBank:WP_000060025.1;Name=WP_000060025.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=CCO40_RS13790;product=chromosome partition protein MukE;protein_id=WP_000060025.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2844584 2845906 . - . ID=gene-CCO40_RS13795;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=CCO40_RS13795;old_locus_tag=CCO40_13795 NZ_CP075116.1 Protein Homology CDS 2844584 2845906 . - 0 ID=cds-WP_001288828.1;Parent=gene-CCO40_RS13795;Dbxref=GenBank:WP_001288828.1;Name=WP_001288828.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=CCO40_RS13795;product=chromosome partition protein MukF;protein_id=WP_001288828.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2845899 2846702 . - . ID=gene-CCO40_RS13800;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=CCO40_RS13800;old_locus_tag=CCO40_13800 NZ_CP075116.1 Protein Homology CDS 2845899 2846702 . - 0 ID=cds-WP_001154025.1;Parent=gene-CCO40_RS13800;Dbxref=GenBank:WP_001154025.1;Name=WP_001154025.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459966.1;locus_tag=CCO40_RS13800;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_001154025.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2846838 2847614 . + . ID=gene-CCO40_RS13805;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=CCO40_RS13805;old_locus_tag=CCO40_13805 NZ_CP075116.1 Protein Homology CDS 2846838 2847614 . + 0 ID=cds-WP_000899553.1;Parent=gene-CCO40_RS13805;Dbxref=GenBank:WP_000899553.1;Name=WP_000899553.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459965.1;locus_tag=CCO40_RS13805;product=envelope biogenesis factor ElyC;protein_id=WP_000899553.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2847594 2848487 . - . ID=gene-CCO40_RS13810;Name=CCO40_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13810;old_locus_tag=CCO40_13810 NZ_CP075116.1 Protein Homology CDS 2847594 2848487 . - 0 ID=cds-WP_000436889.1;Parent=gene-CCO40_RS13810;Dbxref=GenBank:WP_000436889.1;Name=WP_000436889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459964.1;locus_tag=CCO40_RS13810;product=YcbJ family phosphotransferase;protein_id=WP_000436889.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2848698 2849444 . - . ID=gene-CCO40_RS13815;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=CCO40_RS13815;old_locus_tag=CCO40_13815 NZ_CP075116.1 Protein Homology CDS 2848698 2849444 . - 0 ID=cds-WP_000011576.1;Parent=gene-CCO40_RS13815;Dbxref=GenBank:WP_000011576.1;Name=WP_000011576.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459963.1;locus_tag=CCO40_RS13815;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_000011576.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2849441 2849623 . - . ID=gene-CCO40_RS13820;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=CCO40_RS13820;old_locus_tag=CCO40_13820 NZ_CP075116.1 Protein Homology CDS 2849441 2849623 . - 0 ID=cds-WP_000350061.1;Parent=gene-CCO40_RS13820;Dbxref=GenBank:WP_000350061.1;Name=WP_000350061.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459962.1;locus_tag=CCO40_RS13820;product=protein YcaR;protein_id=WP_000350061.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2849675 2850907 . - . ID=gene-CCO40_RS13825;Name=CCO40_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13825;old_locus_tag=CCO40_13825 NZ_CP075116.1 Protein Homology CDS 2849675 2850907 . - 0 ID=cds-WP_000056935.1;Parent=gene-CCO40_RS13825;Dbxref=GenBank:WP_000056935.1;Name=WP_000056935.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=CCO40_RS13825;product=winged helix-turn-helix domain-containing protein;protein_id=WP_000056935.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2850951 2851928 . - . ID=gene-CCO40_RS13830;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=CCO40_RS13830;old_locus_tag=CCO40_13830 NZ_CP075116.1 Protein Homology CDS 2850951 2851928 . - 0 ID=cds-WP_000561682.1;Parent=gene-CCO40_RS13830;Dbxref=GenBank:WP_000561682.1;Name=WP_000561682.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=lipid-A 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459960.1;locus_tag=CCO40_RS13830;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_000561682.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2851925 2853673 . - . ID=gene-CCO40_RS13835;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=CCO40_RS13835;old_locus_tag=CCO40_13835 NZ_CP075116.1 Protein Homology CDS 2851925 2853673 . - 0 ID=cds-WP_000551246.1;Parent=gene-CCO40_RS13835;Dbxref=GenBank:WP_000551246.1;Name=WP_000551246.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459959.1;locus_tag=CCO40_RS13835;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551246.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2853710 2855974 . - . ID=gene-CCO40_RS13840;Name=CCO40_RS13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13840;old_locus_tag=CCO40_13840 NZ_CP075116.1 Protein Homology CDS 2853710 2855974 . - 0 ID=cds-WP_000705780.1;Parent=gene-CCO40_RS13840;Dbxref=GenBank:WP_000705780.1;Name=WP_000705780.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459958.1;locus_tag=CCO40_RS13840;product=ComEC family protein;protein_id=WP_000705780.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2856204 2856488 . - . ID=gene-CCO40_RS13845;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=CCO40_RS13845;old_locus_tag=CCO40_13845 NZ_CP075116.1 Protein Homology CDS 2856204 2856488 . - 0 ID=cds-WP_000167332.1;Parent=gene-CCO40_RS13845;Dbxref=GenBank:WP_000167332.1;Name=WP_000167332.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=CCO40_RS13845;product=integration host factor subunit beta;protein_id=WP_000167332.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2856644 2858317 . - . ID=gene-CCO40_RS13850;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=CCO40_RS13850;old_locus_tag=CCO40_13850 NZ_CP075116.1 Protein Homology CDS 2856644 2858317 . - 0 ID=cds-WP_000140324.1;Parent=gene-CCO40_RS13850;Dbxref=GenBank:WP_000140324.1;Name=WP_000140324.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=CCO40_RS13850;product=30S ribosomal protein S1;protein_id=WP_000140324.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2858431 2859114 . - . ID=gene-CCO40_RS13855;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=CCO40_RS13855;old_locus_tag=CCO40_13855 NZ_CP075116.1 Protein Homology CDS 2858431 2859114 . - 0 ID=cds-WP_000125007.1;Parent=gene-CCO40_RS13855;Dbxref=GenBank:WP_000125007.1;Name=WP_000125007.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=CCO40_RS13855;product=(d)CMP kinase;protein_id=WP_000125007.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2859287 2860048 . - . ID=gene-CCO40_RS13860;Name=loiP;gbkey=Gene;gene=loiP;gene_biotype=protein_coding;locus_tag=CCO40_RS13860;old_locus_tag=CCO40_13860 NZ_CP075116.1 Protein Homology CDS 2859287 2860048 . - 0 ID=cds-WP_000792301.1;Parent=gene-CCO40_RS13860;Dbxref=GenBank:WP_000792301.1;Name=WP_000792301.1;Ontology_term=GO:0004222;gbkey=CDS;gene=loiP;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459954.1;locus_tag=CCO40_RS13860;product=metalloprotease LoiP;protein_id=WP_000792301.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2860191 2861474 . - . ID=gene-CCO40_RS13865;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=CCO40_RS13865;old_locus_tag=CCO40_13865 NZ_CP075116.1 Protein Homology CDS 2860191 2861474 . - 0 ID=cds-WP_080204079.1;Parent=gene-CCO40_RS13865;Dbxref=GenBank:WP_080204079.1;Name=WP_080204079.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=CCO40_RS13865;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_080204079.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2861545 2862633 . - . ID=gene-CCO40_RS13870;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=CCO40_RS13870;old_locus_tag=CCO40_13870 NZ_CP075116.1 Protein Homology CDS 2861545 2862633 . - 0 ID=cds-WP_000079585.1;Parent=gene-CCO40_RS13870;Dbxref=GenBank:WP_000079585.1;Name=WP_000079585.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate transaminase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459952.1;locus_tag=CCO40_RS13870;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_000079585.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2862819 2863511 . - . ID=gene-CCO40_RS13875;Name=CCO40_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13875;old_locus_tag=CCO40_13875 NZ_CP075116.1 Protein Homology CDS 2862819 2863511 . - 0 ID=cds-WP_000642868.1;Parent=gene-CCO40_RS13875;Dbxref=GenBank:WP_000642868.1;Name=WP_000642868.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459951.1;locus_tag=CCO40_RS13875;product=DUF421 domain-containing protein;protein_id=WP_000642868.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2863648 2865408 . + . ID=gene-CCO40_RS13880;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=CCO40_RS13880;old_locus_tag=CCO40_13880 NZ_CP075116.1 Protein Homology CDS 2863648 2865408 . + 0 ID=cds-WP_001538156.1;Parent=gene-CCO40_RS13880;Dbxref=GenBank:WP_001538156.1;Name=WP_001538156.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=CCO40_RS13880;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_001538156.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2865813 2866670 . + . ID=gene-CCO40_RS13885;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=CCO40_RS13885;old_locus_tag=CCO40_13885 NZ_CP075116.1 Protein Homology CDS 2865813 2866670 . + 0 ID=cds-WP_000642539.1;Parent=gene-CCO40_RS13885;Dbxref=GenBank:WP_000642539.1;Name=WP_000642539.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459949.1;locus_tag=CCO40_RS13885;product=formate transporter FocA;protein_id=WP_000642539.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2866730 2869012 . + . ID=gene-CCO40_RS13890;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=CCO40_RS13890;old_locus_tag=CCO40_13890 NZ_CP075116.1 Protein Homology CDS 2866730 2869012 . + 0 ID=cds-WP_001292799.1;Parent=gene-CCO40_RS13890;Dbxref=GenBank:WP_001292799.1;Name=WP_001292799.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=CCO40_RS13890;product=formate C-acetyltransferase;protein_id=WP_001292799.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2869085 2870044 . - . ID=gene-CCO40_RS13895;Name=sopD2;gbkey=Gene;gene=sopD2;gene_biotype=protein_coding;locus_tag=CCO40_RS13895;old_locus_tag=CCO40_13895 NZ_CP075116.1 Protein Homology CDS 2869085 2870044 . - 0 ID=cds-WP_001145551.1;Parent=gene-CCO40_RS13895;Dbxref=GenBank:WP_001145551.1;Name=WP_001145551.1;gbkey=CDS;gene=sopD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459947.1;locus_tag=CCO40_RS13895;product=type III secretion system effector SopD2;protein_id=WP_001145551.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 2870181 2870511 . + . ID=gene-CCO40_RS22495;Name=CCO40_RS22495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22495;partial=true;pseudo=true;start_range=.,2870181 NZ_CP075116.1 Protein Homology CDS 2870181 2870511 . + 0 ID=cds-CCO40_RS22495;Parent=gene-CCO40_RS22495;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459946.1;locus_tag=CCO40_RS22495;partial=true;product=cytoplasmic protein;pseudo=true;start_range=.,2870181;transl_table=11 NZ_CP075116.1 RefSeq gene 2870630 2871427 . + . ID=gene-CCO40_RS13900;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=CCO40_RS13900;old_locus_tag=CCO40_13900 NZ_CP075116.1 Protein Homology CDS 2870630 2871427 . + 0 ID=cds-WP_000067928.1;Parent=gene-CCO40_RS13900;Dbxref=GenBank:WP_000067928.1;Name=WP_000067928.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696619.1;locus_tag=CCO40_RS13900;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000067928.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2871720 2873141 . - . ID=gene-CCO40_RS13905;Name=CCO40_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13905;old_locus_tag=CCO40_13905 NZ_CP075116.1 Protein Homology CDS 2871720 2873141 . - 0 ID=cds-WP_001134264.1;Parent=gene-CCO40_RS13905;Dbxref=GenBank:WP_001134264.1;Name=WP_001134264.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459944.1;locus_tag=CCO40_RS13905;product=APC family permease;protein_id=WP_001134264.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2873359 2874507 . - . ID=gene-CCO40_RS13910;Name=CCO40_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13910;old_locus_tag=CCO40_13910 NZ_CP075116.1 Protein Homology CDS 2873359 2874507 . - 0 ID=cds-WP_000109271.1;Parent=gene-CCO40_RS13910;Dbxref=GenBank:WP_000109271.1;Name=WP_000109271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=CCO40_RS13910;product=MFS transporter;protein_id=WP_000109271.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2874857 2875720 . - . ID=gene-CCO40_RS13915;Name=CCO40_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13915;old_locus_tag=CCO40_13915 NZ_CP075116.1 Protein Homology CDS 2874857 2875720 . - 0 ID=cds-WP_000534683.1;Parent=gene-CCO40_RS13915;Dbxref=GenBank:WP_000534683.1;Name=WP_000534683.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459942.1;locus_tag=CCO40_RS13915;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000534683.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2875722 2876339 . - . ID=gene-CCO40_RS13920;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=CCO40_RS13920;old_locus_tag=CCO40_13920 NZ_CP075116.1 Protein Homology CDS 2875722 2876339 . - 0 ID=cds-WP_000213069.1-2;Parent=gene-CCO40_RS13920;Dbxref=GenBank:WP_000213069.1;Name=WP_000213069.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=CCO40_RS13920;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213069.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2876350 2878794 . - . ID=gene-CCO40_RS13925;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=CCO40_RS13925;old_locus_tag=CCO40_13925 NZ_CP075116.1 Protein Homology CDS 2876350 2878794 . - 0 ID=cds-WP_000850246.1;Parent=gene-CCO40_RS13925;Dbxref=GenBank:WP_000850246.1;Name=WP_000850246.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=CCO40_RS13925;product=dimethylsulfoxide reductase subunit A;protein_id=WP_000850246.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2879031 2880323 . - . ID=gene-CCO40_RS13930;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=CCO40_RS13930;old_locus_tag=CCO40_13930 NZ_CP075116.1 Protein Homology CDS 2879031 2880323 . - 0 ID=cds-WP_000886697.1;Parent=gene-CCO40_RS13930;Dbxref=GenBank:WP_000886697.1;Name=WP_000886697.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=CCO40_RS13930;product=serine--tRNA ligase;protein_id=WP_000886697.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2880582 2881925 . - . ID=gene-CCO40_RS13935;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=CCO40_RS13935;old_locus_tag=CCO40_13935 NZ_CP075116.1 Protein Homology CDS 2880582 2881925 . - 0 ID=cds-WP_000067785.1;Parent=gene-CCO40_RS13935;Dbxref=GenBank:WP_000067785.1;Name=WP_000067785.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459938.1;locus_tag=CCO40_RS13935;product=replication-associated recombination protein RarA;protein_id=WP_000067785.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2881935 2882546 . - . ID=gene-CCO40_RS13940;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=CCO40_RS13940;old_locus_tag=CCO40_13940 NZ_CP075116.1 Protein Homology CDS 2881935 2882546 . - 0 ID=cds-WP_001519746.1;Parent=gene-CCO40_RS13940;Dbxref=GenBank:WP_001519746.1;Name=WP_001519746.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=CCO40_RS13940;product=outer membrane lipoprotein periplasmic chaperone LolA;protein_id=WP_001519746.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2882689 2886771 . - . ID=gene-CCO40_RS13945;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=CCO40_RS13945;old_locus_tag=CCO40_13945 NZ_CP075116.1 Protein Homology CDS 2882689 2886771 . - 0 ID=cds-WP_001531413.1;Parent=gene-CCO40_RS13945;Dbxref=GenBank:WP_001531413.1;Name=WP_001531413.1;Ontology_term=GO:0007059,GO:0051301,GO:0090333,GO:0003677,GO:0005524,GO:0015616;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,DNA translocase activity|0015616||IEA;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA,regulation of stomatal closure|0090333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=CCO40_RS13945;product=DNA translocase FtsK;protein_id=WP_001531413.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2886906 2887400 . - . ID=gene-CCO40_RS13950;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=CCO40_RS13950;old_locus_tag=CCO40_13950 NZ_CP075116.1 Protein Homology CDS 2886906 2887400 . - 0 ID=cds-WP_000228469.1;Parent=gene-CCO40_RS13950;Dbxref=GenBank:WP_000228469.1;Name=WP_000228469.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=CCO40_RS13950;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228469.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2887947 2888915 . + . ID=gene-CCO40_RS13955;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=CCO40_RS13955;old_locus_tag=CCO40_13955 NZ_CP075116.1 Protein Homology CDS 2887947 2888915 . + 0 ID=cds-WP_000537406.1;Parent=gene-CCO40_RS13955;Dbxref=GenBank:WP_000537406.1;Name=WP_000537406.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459934.1;locus_tag=CCO40_RS13955;product=thioredoxin-disulfide reductase;protein_id=WP_000537406.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2889029 2890795 . + . ID=gene-CCO40_RS13960;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=CCO40_RS13960;old_locus_tag=CCO40_13960 NZ_CP075116.1 Protein Homology CDS 2889029 2890795 . + 0 ID=cds-WP_061382939.1;Parent=gene-CCO40_RS13960;Dbxref=GenBank:WP_061382939.1;Name=WP_061382939.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=CCO40_RS13960;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_061382939.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2890796 2892517 . + . ID=gene-CCO40_RS13965;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=CCO40_RS13965;old_locus_tag=CCO40_13965 NZ_CP075116.1 Protein Homology CDS 2890796 2892517 . + 0 ID=cds-WP_023993626.1;Parent=gene-CCO40_RS13965;Dbxref=GenBank:WP_023993626.1;Name=WP_023993626.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=CCO40_RS13965;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_023993626.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2892562 2893266 . + . ID=gene-CCO40_RS13970;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=CCO40_RS13970;old_locus_tag=CCO40_13970 NZ_CP075116.1 Protein Homology CDS 2892562 2893266 . + 0 ID=cds-WP_001241649.1;Parent=gene-CCO40_RS13970;Dbxref=GenBank:WP_001241649.1;Name=WP_001241649.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459931.1;locus_tag=CCO40_RS13970;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_001241649.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2893578 2893796 . + . ID=gene-CCO40_RS13980;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=CCO40_RS13980;old_locus_tag=CCO40_13980 NZ_CP075116.1 Protein Homology CDS 2893578 2893796 . + 0 ID=cds-WP_001040187.1;Parent=gene-CCO40_RS13980;Dbxref=GenBank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=CCO40_RS13980;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2893887 2894798 . - . ID=gene-CCO40_RS13985;Name=CCO40_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13985;old_locus_tag=CCO40_13985 NZ_CP075116.1 Protein Homology CDS 2893887 2894798 . - 0 ID=cds-WP_000597928.1;Parent=gene-CCO40_RS13985;Dbxref=GenBank:WP_000597928.1;Name=WP_000597928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459928.1;locus_tag=CCO40_RS13985;product=LysR family transcriptional regulator;protein_id=WP_000597928.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2894907 2895767 . + . ID=gene-CCO40_RS13990;Name=CCO40_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13990;old_locus_tag=CCO40_13990 NZ_CP075116.1 Protein Homology CDS 2894907 2895767 . + 0 ID=cds-WP_094889224.1;Parent=gene-CCO40_RS13990;Dbxref=GenBank:WP_094889224.1;Name=WP_094889224.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=CCO40_RS13990;product=pirin family protein;protein_id=WP_094889224.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2895787 2896464 . + . ID=gene-CCO40_RS13995;Name=CCO40_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS13995;old_locus_tag=CCO40_13995 NZ_CP075116.1 Protein Homology CDS 2895787 2896464 . + 0 ID=cds-WP_000097893.1;Parent=gene-CCO40_RS13995;Dbxref=GenBank:WP_000097893.1;Name=WP_000097893.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=CCO40_RS13995;product=hydrolase;protein_id=WP_000097893.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2896614 2896701 . + . ID=gene-CCO40_RS14000;Name=CCO40_RS14000;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS14000;old_locus_tag=CCO40_14000 NZ_CP075116.1 tRNAscan-SE tRNA 2896614 2896701 . + . ID=rna-CCO40_RS14000;Parent=gene-CCO40_RS14000;anticodon=(pos:2896648..2896650);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS14000;product=tRNA-Ser NZ_CP075116.1 tRNAscan-SE exon 2896614 2896701 . + . ID=exon-CCO40_RS14000-1;Parent=rna-CCO40_RS14000;anticodon=(pos:2896648..2896650);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS14000;product=tRNA-Ser NZ_CP075116.1 RefSeq pseudogene 2897345 2897698 . + . ID=gene-CCO40_RS14005;Name=CCO40_RS14005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS14005;old_locus_tag=CCO40_14005;partial=true;pseudo=true;start_range=.,2897345 NZ_CP075116.1 Protein Homology CDS 2897345 2897698 . + 0 ID=cds-CCO40_RS14005;Parent=gene-CCO40_RS14005;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524896.1;locus_tag=CCO40_RS14005;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,2897345;transl_table=11 NZ_CP075116.1 RefSeq gene 2897860 2898057 . + . ID=gene-CCO40_RS14010;Name=CCO40_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14010;old_locus_tag=CCO40_14010 NZ_CP075116.1 Protein Homology CDS 2897860 2898057 . + 0 ID=cds-WP_001117984.1;Parent=gene-CCO40_RS14010;Dbxref=GenBank:WP_001117984.1;Name=WP_001117984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111984.1;locus_tag=CCO40_RS14010;product=hypothetical protein;protein_id=WP_001117984.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2898269 2900545 . - . ID=gene-CCO40_RS14015;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=CCO40_RS14015;old_locus_tag=CCO40_14015 NZ_CP075116.1 Protein Homology CDS 2898269 2900545 . - 0 ID=cds-WP_000934063.1;Parent=gene-CCO40_RS14015;Dbxref=GenBank:WP_000934063.1;Name=WP_000934063.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=CCO40_RS14015;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_000934063.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2900576 2900896 . - . ID=gene-CCO40_RS14020;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=CCO40_RS14020;old_locus_tag=CCO40_14020 NZ_CP075116.1 Protein Homology CDS 2900576 2900896 . - 0 ID=cds-WP_000520789.1;Parent=gene-CCO40_RS14020;Dbxref=GenBank:WP_000520789.1;Name=WP_000520789.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=CCO40_RS14020;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520789.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2900992 2901069 . - . ID=gene-CCO40_RS14025;Name=CCO40_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14025;old_locus_tag=CCO40_14025 NZ_CP075116.1 Protein Homology CDS 2900992 2901069 . - 0 ID=cds-WP_212742690.1;Parent=gene-CCO40_RS14025;Dbxref=GenBank:WP_212742690.1;Name=WP_212742690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=CCO40_RS14025;product=hypothetical protein;protein_id=WP_212742690.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2901220 2901441 . + . ID=gene-CCO40_RS14030;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=CCO40_RS14030;old_locus_tag=CCO40_14030 NZ_CP075116.1 Protein Homology CDS 2901220 2901441 . + 0 ID=cds-WP_000447499.1;Parent=gene-CCO40_RS14030;Dbxref=GenBank:WP_000447499.1;Name=WP_000447499.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=CCO40_RS14030;product=cold shock-like protein CspD;protein_id=WP_000447499.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2901571 2903517 . - . ID=gene-CCO40_RS14035;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=CCO40_RS14035;old_locus_tag=CCO40_14035 NZ_CP075116.1 Protein Homology CDS 2901571 2903517 . - 0 ID=cds-WP_000125877.1;Parent=gene-CCO40_RS14035;Dbxref=GenBank:WP_000125877.1;Name=WP_000125877.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459919.1;locus_tag=CCO40_RS14035;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_000125877.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2903514 2904632 . - . ID=gene-CCO40_RS14040;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=CCO40_RS14040;old_locus_tag=CCO40_14040 NZ_CP075116.1 Protein Homology CDS 2903514 2904632 . - 0 ID=cds-WP_045717378.1;Parent=gene-CCO40_RS14040;Dbxref=GenBank:WP_045717378.1;Name=WP_045717378.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=CCO40_RS14040;product=macrolide transporter subunit MacA;protein_id=WP_045717378.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2904778 2905728 . + . ID=gene-CCO40_RS14045;Name=CCO40_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14045;old_locus_tag=CCO40_14045 NZ_CP075116.1 Protein Homology CDS 2904778 2905728 . + 0 ID=cds-WP_001519667.1;Parent=gene-CCO40_RS14045;Dbxref=GenBank:WP_001519667.1;Name=WP_001519667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519667.1;locus_tag=CCO40_RS14045;product=VirK/YbjX family protein;protein_id=WP_001519667.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2905725 2907383 . - . ID=gene-CCO40_RS14050;Name=CCO40_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14050;old_locus_tag=CCO40_14050 NZ_CP075116.1 Protein Homology CDS 2905725 2907383 . - 0 ID=cds-WP_000599761.1;Parent=gene-CCO40_RS14050;Dbxref=GenBank:WP_000599761.1;Name=WP_000599761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=CCO40_RS14050;product=ATP-dependent endonuclease;protein_id=WP_000599761.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2907585 2908484 . + . ID=gene-CCO40_RS14055;Name=CCO40_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14055;old_locus_tag=CCO40_14055 NZ_CP075116.1 Protein Homology CDS 2907585 2908484 . + 0 ID=cds-WP_000491118.1;Parent=gene-CCO40_RS14055;Dbxref=GenBank:WP_000491118.1;Name=WP_000491118.1;Ontology_term=GO:1903401,GO:0015661;gbkey=CDS;go_function=L-lysine efflux transmembrane transporter activity|0015661||IEA;go_process=L-lysine transmembrane transport|1903401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=CCO40_RS14055;product=LysO family transporter;protein_id=WP_000491118.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2908628 2910280 . + . ID=gene-CCO40_RS14060;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=CCO40_RS14060;old_locus_tag=CCO40_14060 NZ_CP075116.1 Protein Homology CDS 2908628 2910280 . + 0 ID=cds-WP_000458776.1;Parent=gene-CCO40_RS14060;Dbxref=GenBank:WP_000458776.1;Name=WP_000458776.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=CCO40_RS14060;product=hydroxylamine reductase;protein_id=WP_000458776.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2910292 2911260 . + . ID=gene-CCO40_RS14065;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=CCO40_RS14065;old_locus_tag=CCO40_14065 NZ_CP075116.1 Protein Homology CDS 2910292 2911260 . + 0 ID=cds-WP_000178698.1;Parent=gene-CCO40_RS14065;Dbxref=GenBank:WP_000178698.1;Name=WP_000178698.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=CCO40_RS14065;product=NADH oxidoreductase;protein_id=WP_000178698.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2911418 2913136 . + . ID=gene-CCO40_RS14070;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=CCO40_RS14070;old_locus_tag=CCO40_14070 NZ_CP075116.1 Protein Homology CDS 2911418 2913136 . + 0 ID=cds-WP_001728981.1;Parent=gene-CCO40_RS14070;Dbxref=GenBank:WP_001728981.1;Name=WP_001728981.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459912.1;locus_tag=CCO40_RS14070;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_001728981.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2913175 2914176 . + . ID=gene-CCO40_RS14075;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=CCO40_RS14075;old_locus_tag=CCO40_14075 NZ_CP075116.1 Protein Homology CDS 2913175 2914176 . + 0 ID=cds-WP_000566346.1;Parent=gene-CCO40_RS14075;Dbxref=GenBank:WP_000566346.1;Name=WP_000566346.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=CCO40_RS14075;product=low-specificity L-threonine aldolase;protein_id=WP_000566346.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2914187 2915620 . + . ID=gene-CCO40_RS14080;Name=CCO40_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14080;old_locus_tag=CCO40_14080 NZ_CP075116.1 Protein Homology CDS 2914187 2915620 . + 0 ID=cds-WP_021294545.1;Parent=gene-CCO40_RS14080;Dbxref=GenBank:WP_021294545.1;Name=WP_021294545.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459910.1;locus_tag=CCO40_RS14080;product=SDR family oxidoreductase;protein_id=WP_021294545.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2915716 2916729 . + . ID=gene-CCO40_RS14085;Name=CCO40_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14085;old_locus_tag=CCO40_14085 NZ_CP075116.1 Protein Homology CDS 2915716 2916729 . + 0 ID=cds-WP_000866903.1;Parent=gene-CCO40_RS14085;Dbxref=GenBank:WP_000866903.1;Name=WP_000866903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459909.1;locus_tag=CCO40_RS14085;product=3-beta-hydroxysteroid dehydrogenase;protein_id=WP_000866903.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2916726 2917556 . - . ID=gene-CCO40_RS14090;Name=CCO40_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14090;old_locus_tag=CCO40_14090 NZ_CP075116.1 Protein Homology CDS 2916726 2917556 . - 0 ID=cds-WP_094889225.1;Parent=gene-CCO40_RS14090;Dbxref=GenBank:WP_094889225.1;Name=WP_094889225.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745,GO:0042834,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459908.1;locus_tag=CCO40_RS14090;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_094889225.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2917553 2917876 . - . ID=gene-CCO40_RS14095;Name=CCO40_RS14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14095;old_locus_tag=CCO40_14095 NZ_CP075116.1 Protein Homology CDS 2917553 2917876 . - 0 ID=cds-WP_001160725.1;Parent=gene-CCO40_RS14095;Dbxref=GenBank:WP_001160725.1;Name=WP_001160725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=CCO40_RS14095;product=heavy metal-binding domain-containing protein;protein_id=WP_001160725.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2918004 2918519 . + . ID=gene-CCO40_RS14100;Name=CCO40_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14100;old_locus_tag=CCO40_14100 NZ_CP075116.1 Protein Homology CDS 2918004 2918519 . + 0 ID=cds-WP_001270724.1;Parent=gene-CCO40_RS14100;Dbxref=GenBank:WP_001270724.1;Name=WP_001270724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459868.1;locus_tag=CCO40_RS14100;product=lipoprotein;protein_id=WP_001270724.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2918749 2919477 . + . ID=gene-CCO40_RS14105;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=CCO40_RS14105;old_locus_tag=CCO40_14105 NZ_CP075116.1 Protein Homology CDS 2918749 2919477 . + 0 ID=cds-WP_000027186.1;Parent=gene-CCO40_RS14105;Dbxref=GenBank:WP_000027186.1;Name=WP_000027186.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=CCO40_RS14105;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027186.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2919495 2920226 . + . ID=gene-CCO40_RS14110;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=CCO40_RS14110;old_locus_tag=CCO40_14110 NZ_CP075116.1 Protein Homology CDS 2919495 2920226 . + 0 ID=cds-WP_000756586.1;Parent=gene-CCO40_RS14110;Dbxref=GenBank:WP_000756586.1;Name=WP_000756586.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459866.1;locus_tag=CCO40_RS14110;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=WP_000756586.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2920233 2920949 . + . ID=gene-CCO40_RS14115;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=CCO40_RS14115;old_locus_tag=CCO40_14115 NZ_CP075116.1 Protein Homology CDS 2920233 2920949 . + 0 ID=cds-WP_001001677.1;Parent=gene-CCO40_RS14115;Dbxref=GenBank:WP_001001677.1;Name=WP_001001677.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459865.1;locus_tag=CCO40_RS14115;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001677.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2920949 2921617 . + . ID=gene-CCO40_RS14120;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=CCO40_RS14120;old_locus_tag=CCO40_14120 NZ_CP075116.1 Protein Homology CDS 2920949 2921617 . + 0 ID=cds-WP_000895396.1;Parent=gene-CCO40_RS14120;Dbxref=GenBank:WP_000895396.1;Name=WP_000895396.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459864.1;locus_tag=CCO40_RS14120;product=arginine ABC transporter permease ArtM;protein_id=WP_000895396.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2921854 2922585 . + . ID=gene-CCO40_RS14125;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=CCO40_RS14125;old_locus_tag=CCO40_14125 NZ_CP075116.1 Protein Homology CDS 2921854 2922585 . + 0 ID=cds-WP_000737538.1;Parent=gene-CCO40_RS14125;Dbxref=GenBank:WP_000737538.1;Name=WP_000737538.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459863.1;locus_tag=CCO40_RS14125;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=WP_000737538.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2922804 2924291 . - . ID=gene-CCO40_RS14130;Name=CCO40_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14130;old_locus_tag=CCO40_14130 NZ_CP075116.1 Protein Homology CDS 2922804 2924291 . - 0 ID=cds-WP_094889226.1;Parent=gene-CCO40_RS14130;Dbxref=GenBank:WP_094889226.1;Name=WP_094889226.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459862.1;locus_tag=CCO40_RS14130;product=sulfatase;protein_id=WP_094889226.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2924301 2924621 . - . ID=gene-CCO40_RS14135;Name=CCO40_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14135;old_locus_tag=CCO40_14135 NZ_CP075116.1 Protein Homology CDS 2924301 2924621 . - 0 ID=cds-WP_000655399.1;Parent=gene-CCO40_RS14135;Dbxref=GenBank:WP_000655399.1;Name=WP_000655399.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=CCO40_RS14135;product=PTS sugar transporter subunit IIB;protein_id=WP_000655399.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2924651 2925994 . - . ID=gene-CCO40_RS14140;Name=CCO40_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14140;old_locus_tag=CCO40_14140 NZ_CP075116.1 Protein Homology CDS 2924651 2925994 . - 0 ID=cds-WP_000399323.1;Parent=gene-CCO40_RS14140;Dbxref=GenBank:WP_000399323.1;Name=WP_000399323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=CCO40_RS14140;product=PTS sugar transporter subunit IIC;protein_id=WP_000399323.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2926289 2927416 . - . ID=gene-CCO40_RS14145;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=CCO40_RS14145;old_locus_tag=CCO40_14145 NZ_CP075116.1 Protein Homology CDS 2926289 2927416 . - 0 ID=cds-WP_001149774.1;Parent=gene-CCO40_RS14145;Dbxref=GenBank:WP_001149774.1;Name=WP_001149774.1;Ontology_term=GO:0000154,GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA,RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149796.1;locus_tag=CCO40_RS14145;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_001149774.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2927459 2927932 . - . ID=gene-CCO40_RS14150;Name=CCO40_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14150;old_locus_tag=CCO40_14150 NZ_CP075116.1 Protein Homology CDS 2927459 2927932 . - 0 ID=cds-WP_000505788.1;Parent=gene-CCO40_RS14150;Dbxref=GenBank:WP_000505788.1;Name=WP_000505788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459858.1;locus_tag=CCO40_RS14150;product=YbjO family protein;protein_id=WP_000505788.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2928006 2928851 . - . ID=gene-CCO40_RS14155;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=CCO40_RS14155;old_locus_tag=CCO40_14155 NZ_CP075116.1 Protein Homology CDS 2928006 2928851 . - 0 ID=cds-WP_001061629.1;Parent=gene-CCO40_RS14155;Dbxref=GenBank:WP_001061629.1;Name=WP_001061629.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=CCO40_RS14155;product=putrescine ABC transporter permease PotI;protein_id=WP_001061629.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2928848 2929801 . - . ID=gene-CCO40_RS14160;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=CCO40_RS14160;old_locus_tag=CCO40_14160 NZ_CP075116.1 Protein Homology CDS 2928848 2929801 . - 0 ID=cds-WP_000105453.1;Parent=gene-CCO40_RS14160;Dbxref=GenBank:WP_000105453.1;Name=WP_000105453.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=CCO40_RS14160;product=putrescine ABC transporter permease PotH;protein_id=WP_000105453.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2929811 2930944 . - . ID=gene-CCO40_RS14165;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=CCO40_RS14165;old_locus_tag=CCO40_14165 NZ_CP075116.1 Protein Homology CDS 2929811 2930944 . - 0 ID=cds-WP_001000702.1;Parent=gene-CCO40_RS14165;Dbxref=GenBank:WP_001000702.1;Name=WP_001000702.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=CCO40_RS14165;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_001000702.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2931032 2932144 . - . ID=gene-CCO40_RS14170;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=CCO40_RS14170;old_locus_tag=CCO40_14170 NZ_CP075116.1 Protein Homology CDS 2931032 2932144 . - 0 ID=cds-WP_000125769.1;Parent=gene-CCO40_RS14170;Dbxref=GenBank:WP_000125769.1;Name=WP_000125769.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=CCO40_RS14170;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_000125769.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2932493 2932969 . - . ID=gene-CCO40_RS14175;Name=CCO40_RS14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14175;old_locus_tag=CCO40_14175 NZ_CP075116.1 Protein Homology CDS 2932493 2932969 . - 0 ID=cds-WP_000624814.1;Parent=gene-CCO40_RS14175;Dbxref=GenBank:WP_000624814.1;Name=WP_000624814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459853.1;locus_tag=CCO40_RS14175;product=YbjN domain-containing protein;protein_id=WP_000624814.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2933066 2933968 . - . ID=gene-CCO40_RS14180;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=CCO40_RS14180;old_locus_tag=CCO40_14180 NZ_CP075116.1 Protein Homology CDS 2933066 2933968 . - 0 ID=cds-WP_000684361.1;Parent=gene-CCO40_RS14180;Dbxref=GenBank:WP_000684361.1;Name=WP_000684361.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459852.1;locus_tag=CCO40_RS14180;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_000684361.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2934026 2934748 . - . ID=gene-CCO40_RS14185;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=CCO40_RS14185;old_locus_tag=CCO40_14185 NZ_CP075116.1 Protein Homology CDS 2934026 2934748 . - 0 ID=cds-WP_000075300.1;Parent=gene-CCO40_RS14185;Dbxref=GenBank:WP_000075300.1;Name=WP_000075300.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459851.1;locus_tag=CCO40_RS14185;product=nitroreductase NfsA;protein_id=WP_000075300.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2934732 2935022 . - . ID=gene-CCO40_RS14190;Name=CCO40_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14190;old_locus_tag=CCO40_14190 NZ_CP075116.1 Protein Homology CDS 2934732 2935022 . - 0 ID=cds-WP_001259131.1;Parent=gene-CCO40_RS14190;Dbxref=GenBank:WP_001259131.1;Name=WP_001259131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459850.1;locus_tag=CCO40_RS14190;product=YbjC family protein;protein_id=WP_001259131.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2935192 2935455 . + . ID=gene-CCO40_RS14195;Name=CCO40_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14195;old_locus_tag=CCO40_14195 NZ_CP075116.1 Protein Homology CDS 2935192 2935455 . + 0 ID=cds-WP_000495513.1;Parent=gene-CCO40_RS14195;Dbxref=GenBank:WP_000495513.1;Name=WP_000495513.1;Ontology_term=GO:0045454,GO:0009055,GO:0015035;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459849.1;locus_tag=CCO40_RS14195;product=GrxA family glutaredoxin;protein_id=WP_000495513.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2935487 2935864 . - . ID=gene-CCO40_RS14200;Name=CCO40_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14200;old_locus_tag=CCO40_14200 NZ_CP075116.1 Protein Homology CDS 2935487 2935864 . - 0 ID=cds-WP_000680850.1;Parent=gene-CCO40_RS14200;Dbxref=GenBank:WP_000680850.1;Name=WP_000680850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459848.1;locus_tag=CCO40_RS14200;product=inner membrane protein YbjM;protein_id=WP_000680850.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2936135 2937820 . + . ID=gene-CCO40_RS14205;Name=CCO40_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14205;old_locus_tag=CCO40_14205 NZ_CP075116.1 Protein Homology CDS 2936135 2937820 . + 0 ID=cds-WP_001024853.1;Parent=gene-CCO40_RS14205;Dbxref=GenBank:WP_001024853.1;Name=WP_001024853.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=CCO40_RS14205;product=aspartate:alanine antiporter;protein_id=WP_001024853.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2937997 2938557 . - . ID=gene-CCO40_RS14210;Name=CCO40_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14210;old_locus_tag=CCO40_14210 NZ_CP075116.1 Protein Homology CDS 2937997 2938557 . - 0 ID=cds-WP_000661880.1;Parent=gene-CCO40_RS14210;Dbxref=GenBank:WP_000661880.1;Name=WP_000661880.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000661880.1;locus_tag=CCO40_RS14210;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000661880.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2938725 2939936 . + . ID=gene-CCO40_RS14215;Name=CCO40_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14215;old_locus_tag=CCO40_14215 NZ_CP075116.1 Protein Homology CDS 2938725 2939936 . + 0 ID=cds-WP_000217430.1;Parent=gene-CCO40_RS14215;Dbxref=GenBank:WP_000217430.1;Name=WP_000217430.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=CCO40_RS14215;product=MFS transporter;protein_id=WP_000217430.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2939933 2940748 . + . ID=gene-CCO40_RS14220;Name=CCO40_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14220;old_locus_tag=CCO40_14220 NZ_CP075116.1 Protein Homology CDS 2939933 2940748 . + 0 ID=cds-WP_000023549.1;Parent=gene-CCO40_RS14220;Dbxref=GenBank:WP_000023549.1;Name=WP_000023549.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459844.1;locus_tag=CCO40_RS14220;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000023549.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2940802 2942034 . - . ID=gene-CCO40_RS14225;Name=CCO40_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14225;old_locus_tag=CCO40_14225 NZ_CP075116.1 Protein Homology CDS 2940802 2942034 . - 0 ID=cds-WP_001181284.1;Parent=gene-CCO40_RS14225;Dbxref=GenBank:WP_001181284.1;Name=WP_001181284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459843.1;locus_tag=CCO40_RS14225;product=MFS transporter;protein_id=WP_001181284.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2942347 2942955 . + . ID=gene-CCO40_RS14230;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=CCO40_RS14230;old_locus_tag=CCO40_14230 NZ_CP075116.1 Protein Homology CDS 2942347 2942955 . + 0 ID=cds-WP_001531378.1;Parent=gene-CCO40_RS14230;Dbxref=GenBank:WP_001531378.1;Name=WP_001531378.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459842.1;locus_tag=CCO40_RS14230;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001531378.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2943027 2943785 . + . ID=gene-CCO40_RS14235;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=CCO40_RS14235;old_locus_tag=CCO40_14235 NZ_CP075116.1 Protein Homology CDS 2943027 2943785 . + 0 ID=cds-WP_000450103.1;Parent=gene-CCO40_RS14235;Dbxref=GenBank:WP_000450103.1;Name=WP_000450103.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459841.1;locus_tag=CCO40_RS14235;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450103.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2943830 2945032 . - . ID=gene-CCO40_RS14240;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=CCO40_RS14240;old_locus_tag=CCO40_14240 NZ_CP075116.1 Protein Homology CDS 2943830 2945032 . - 0 ID=cds-WP_000195714.1;Parent=gene-CCO40_RS14240;Dbxref=GenBank:WP_000195714.1;Name=WP_000195714.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459840.1;locus_tag=CCO40_RS14240;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_000195714.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2945276 2945902 . + . ID=gene-CCO40_RS14245;Name=CCO40_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14245;old_locus_tag=CCO40_14245 NZ_CP075116.1 Protein Homology CDS 2945276 2945902 . + 0 ID=cds-WP_000631907.1;Parent=gene-CCO40_RS14245;Dbxref=GenBank:WP_000631907.1;Name=WP_000631907.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459839.1;locus_tag=CCO40_RS14245;product=glutathione S-transferase family protein;protein_id=WP_000631907.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 2945899 2946401 . - . ID=gene-CCO40_RS22500;Name=CCO40_RS22500;end_range=2946401,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22500;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 2945899 2946401 . - 0 ID=cds-CCO40_RS22500;Parent=gene-CCO40_RS22500;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2946401,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000554957.1;locus_tag=CCO40_RS22500;partial=true;product=PQQ-dependent sugar dehydrogenase;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 2946387 2946590 . - . ID=gene-CCO40_RS22505;Name=CCO40_RS22505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22505;partial=true;pseudo=true;start_range=.,2946387 NZ_CP075116.1 Protein Homology CDS 2946387 2946590 . - 0 ID=cds-CCO40_RS22505;Parent=gene-CCO40_RS22505;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611160.1;locus_tag=CCO40_RS22505;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,2946387;transl_table=11 NZ_CP075116.1 RefSeq gene 2946937 2947362 . + . ID=gene-CCO40_RS14260;Name=CCO40_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14260;old_locus_tag=CCO40_14260 NZ_CP075116.1 Protein Homology CDS 2946937 2947362 . + 0 ID=cds-WP_000287112.1;Parent=gene-CCO40_RS14260;Dbxref=GenBank:WP_000287112.1;Name=WP_000287112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459837.1;locus_tag=CCO40_RS14260;product=GntP family permease;protein_id=WP_000287112.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2947627 2948517 . + . ID=gene-CCO40_RS14265;Name=CCO40_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14265;old_locus_tag=CCO40_14265 NZ_CP075116.1 Protein Homology CDS 2947627 2948517 . + 0 ID=cds-WP_000545334.1;Parent=gene-CCO40_RS14265;Dbxref=GenBank:WP_000545334.1;Name=WP_000545334.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459836.1;locus_tag=CCO40_RS14265;product=LysR family transcriptional regulator;protein_id=WP_000545334.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2948523 2950208 . - . ID=gene-CCO40_RS14270;Name=CCO40_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14270;old_locus_tag=CCO40_14270 NZ_CP075116.1 Protein Homology CDS 2948523 2950208 . - 0 ID=cds-WP_001000306.1;Parent=gene-CCO40_RS14270;Dbxref=GenBank:WP_001000306.1;Name=WP_001000306.1;Ontology_term=GO:0022900,GO:0004174,GO:0046872,GO:0051539;gbkey=CDS;go_function=electron-transferring-flavoprotein dehydrogenase activity|0004174||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459835.1;locus_tag=CCO40_RS14270;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WP_001000306.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2950657 2951820 . - . ID=gene-CCO40_RS14275;Name=CCO40_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14275;old_locus_tag=CCO40_14275 NZ_CP075116.1 Protein Homology CDS 2950657 2951820 . - 0 ID=cds-WP_000835387.1;Parent=gene-CCO40_RS14275;Dbxref=GenBank:WP_000835387.1;Name=WP_000835387.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459834.1;locus_tag=CCO40_RS14275;product=acyl-CoA dehydrogenase family protein;protein_id=WP_000835387.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2951817 2952080 . - . ID=gene-CCO40_RS14280;Name=CCO40_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14280;old_locus_tag=CCO40_14280 NZ_CP075116.1 GeneMarkS-2+ CDS 2951817 2952080 . - 0 ID=cds-WP_001528824.1;Parent=gene-CCO40_RS14280;Dbxref=GenBank:WP_001528824.1;Name=WP_001528824.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO40_RS14280;product=HTD2 family dehydratase;protein_id=WP_001528824.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2952113 2953066 . - . ID=gene-CCO40_RS14285;Name=CCO40_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14285;old_locus_tag=CCO40_14285 NZ_CP075116.1 Protein Homology CDS 2952113 2953066 . - 0 ID=cds-WP_000157772.1;Parent=gene-CCO40_RS14285;Dbxref=GenBank:WP_000157772.1;Name=WP_000157772.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459833.1;locus_tag=CCO40_RS14285;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_000157772.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2953077 2953826 . - . ID=gene-CCO40_RS14290;Name=CCO40_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14290;old_locus_tag=CCO40_14290 NZ_CP075116.1 Protein Homology CDS 2953077 2953826 . - 0 ID=cds-WP_001521753.1;Parent=gene-CCO40_RS14290;Dbxref=GenBank:WP_001521753.1;Name=WP_001521753.1;Ontology_term=GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002949615.1;locus_tag=CCO40_RS14290;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_001521753.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2953849 2954364 . - . ID=gene-CCO40_RS14295;Name=CCO40_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14295;old_locus_tag=CCO40_14295 NZ_CP075116.1 Protein Homology CDS 2953849 2954364 . - 0 ID=cds-WP_094889229.1;Parent=gene-CCO40_RS14295;Dbxref=GenBank:WP_094889229.1;Name=WP_094889229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459831.1;locus_tag=CCO40_RS14295;product=STM0854 family CoA ester lyase;protein_id=WP_094889229.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 2954690 2954975 . - . ID=gene-CCO40_RS22510;Name=CCO40_RS22510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22510;partial=true;pseudo=true;start_range=.,2954690 NZ_CP075116.1 Protein Homology CDS 2954690 2954975 . - 0 ID=cds-CCO40_RS22510;Parent=gene-CCO40_RS22510;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_046881606.1;locus_tag=CCO40_RS22510;partial=true;product=IS4-like element ISEc60 family transposase;pseudo=true;start_range=.,2954690;transl_table=11 NZ_CP075116.1 RefSeq gene 2955078 2955461 . - . ID=gene-CCO40_RS14300;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=CCO40_RS14300;old_locus_tag=CCO40_14300 NZ_CP075116.1 Protein Homology CDS 2955078 2955461 . - 0 ID=cds-WP_023203673.1;Parent=gene-CCO40_RS14300;Dbxref=GenBank:WP_023203673.1;Name=WP_023203673.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459830.1;locus_tag=CCO40_RS14300;product=biofilm formation regulator BssR;protein_id=WP_023203673.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2955692 2957017 . + . ID=gene-CCO40_RS14305;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=CCO40_RS14305;old_locus_tag=CCO40_14305 NZ_CP075116.1 Protein Homology CDS 2955692 2957017 . + 0 ID=cds-WP_000073313.1;Parent=gene-CCO40_RS14305;Dbxref=GenBank:WP_000073313.1;Name=WP_000073313.1;Ontology_term=GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=CCO40_RS14305;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_000073313.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2957108 2958019 . - . ID=gene-CCO40_RS14310;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=CCO40_RS14310;old_locus_tag=CCO40_14310 NZ_CP075116.1 Protein Homology CDS 2957108 2958019 . - 0 ID=cds-WP_001236024.1;Parent=gene-CCO40_RS14310;Dbxref=GenBank:WP_001236024.1;Name=WP_001236024.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459828.1;locus_tag=CCO40_RS14310;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236024.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2958022 2958942 . - . ID=gene-CCO40_RS14315;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=CCO40_RS14315;old_locus_tag=CCO40_14315 NZ_CP075116.1 Protein Homology CDS 2958022 2958942 . - 0 ID=cds-WP_000936066.1;Parent=gene-CCO40_RS14315;Dbxref=GenBank:WP_000936066.1;Name=WP_000936066.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459827.1;locus_tag=CCO40_RS14315;product=glutathione ABC transporter permease GsiC;protein_id=WP_000936066.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2959003 2960541 . - . ID=gene-CCO40_RS14320;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=CCO40_RS14320;old_locus_tag=CCO40_14320 NZ_CP075116.1 Protein Homology CDS 2959003 2960541 . - 0 ID=cds-WP_000191440.1;Parent=gene-CCO40_RS14320;Dbxref=GenBank:WP_000191440.1;Name=WP_000191440.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459826.1;locus_tag=CCO40_RS14320;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_000191440.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2960574 2962445 . - . ID=gene-CCO40_RS14325;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=CCO40_RS14325;old_locus_tag=CCO40_14325 NZ_CP075116.1 Protein Homology CDS 2960574 2962445 . - 0 ID=cds-WP_094889230.1;Parent=gene-CCO40_RS14325;Dbxref=GenBank:WP_094889230.1;Name=WP_094889230.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=CCO40_RS14325;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_094889230.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2962456 2963397 . - . ID=gene-CCO40_RS14330;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=CCO40_RS14330;old_locus_tag=CCO40_14330 NZ_CP075116.1 Protein Homology CDS 2962456 2963397 . - 0 ID=cds-WP_094889231.1;Parent=gene-CCO40_RS14330;Dbxref=GenBank:WP_094889231.1;Name=WP_094889231.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459824.1;locus_tag=CCO40_RS14330;product=beta-aspartyl-peptidase;protein_id=WP_094889231.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2963601 2964836 . + . ID=gene-CCO40_RS14335;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=CCO40_RS14335;old_locus_tag=CCO40_14335 NZ_CP075116.1 Protein Homology CDS 2963601 2964836 . + 0 ID=cds-WP_023249843.1;Parent=gene-CCO40_RS14335;Dbxref=GenBank:WP_023249843.1;Name=WP_023249843.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=CCO40_RS14335;product=molybdopterin molybdotransferase MoeA;protein_id=WP_023249843.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2964836 2965585 . + . ID=gene-CCO40_RS14340;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=CCO40_RS14340;old_locus_tag=CCO40_14340 NZ_CP075116.1 Protein Homology CDS 2964836 2965585 . + 0 ID=cds-WP_094889232.1;Parent=gene-CCO40_RS14340;Dbxref=GenBank:WP_094889232.1;Name=WP_094889232.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459822.1;locus_tag=CCO40_RS14340;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_094889232.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2965863 2966762 . + . ID=gene-CCO40_RS14345;Name=CCO40_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14345;old_locus_tag=CCO40_14345 NZ_CP075116.1 Protein Homology CDS 2965863 2966762 . + 0 ID=cds-WP_000576947.1;Parent=gene-CCO40_RS14345;Dbxref=GenBank:WP_000576947.1;Name=WP_000576947.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459821.1;locus_tag=CCO40_RS14345;product=glycyl-radical enzyme activating protein;protein_id=WP_000576947.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2966768 2969200 . + . ID=gene-CCO40_RS14350;Name=CCO40_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14350;old_locus_tag=CCO40_14350 NZ_CP075116.1 Protein Homology CDS 2966768 2969200 . + 0 ID=cds-WP_094889233.1;Parent=gene-CCO40_RS14350;Dbxref=GenBank:WP_094889233.1;Name=WP_094889233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459820.1;locus_tag=CCO40_RS14350;product=glycyl radical protein;protein_id=WP_094889233.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2969278 2970087 . - . ID=gene-CCO40_RS14355;Name=CCO40_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14355;old_locus_tag=CCO40_14355 NZ_CP075116.1 Protein Homology CDS 2969278 2970087 . - 0 ID=cds-WP_000217910.1;Parent=gene-CCO40_RS14355;Dbxref=GenBank:WP_000217910.1;Name=WP_000217910.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459819.1;locus_tag=CCO40_RS14355;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_000217910.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2970349 2971614 . + . ID=gene-CCO40_RS14360;Name=CCO40_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14360;old_locus_tag=CCO40_14360 NZ_CP075116.1 Protein Homology CDS 2970349 2971614 . + 0 ID=cds-WP_094889234.1;Parent=gene-CCO40_RS14360;Dbxref=GenBank:WP_094889234.1;Name=WP_094889234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459818.1;locus_tag=CCO40_RS14360;product=DUF1479 domain-containing protein;protein_id=WP_094889234.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2971736 2973331 . - . ID=gene-CCO40_RS14365;Name=CCO40_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14365;old_locus_tag=CCO40_14365 NZ_CP075116.1 Protein Homology CDS 2971736 2973331 . - 0 ID=cds-WP_000961480.1;Parent=gene-CCO40_RS14365;Dbxref=GenBank:WP_000961480.1;Name=WP_000961480.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961428.1;locus_tag=CCO40_RS14365;product=ABC-F family ATPase;protein_id=WP_000961480.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2973551 2974471 . + . ID=gene-CCO40_RS14370;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;gene_synonym=ybiS;locus_tag=CCO40_RS14370;old_locus_tag=CCO40_14370 NZ_CP075116.1 Protein Homology CDS 2973551 2974471 . + 0 ID=cds-WP_001056404.1;Parent=gene-CCO40_RS14370;Dbxref=GenBank:WP_001056404.1;Name=WP_001056404.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459814.1;locus_tag=CCO40_RS14370;product=L%2CD-transpeptidase;protein_id=WP_001056404.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2974515 2975627 . - . ID=gene-CCO40_RS14375;Name=CCO40_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14375;old_locus_tag=CCO40_14375 NZ_CP075116.1 Protein Homology CDS 2974515 2975627 . - 0 ID=cds-WP_000050089.1;Parent=gene-CCO40_RS14375;Dbxref=GenBank:WP_000050089.1;Name=WP_000050089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459813.1;locus_tag=CCO40_RS14375;product=anion transporter;protein_id=WP_000050089.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2975624 2976097 . - . ID=gene-CCO40_RS14380;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=CCO40_RS14380;old_locus_tag=CCO40_14380 NZ_CP075116.1 Protein Homology CDS 2975624 2976097 . - 0 ID=cds-WP_000533542.1;Parent=gene-CCO40_RS14380;Dbxref=GenBank:WP_000533542.1;Name=WP_000533542.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459812.1;locus_tag=CCO40_RS14380;product=manganese-binding transcriptional regulator MntR;protein_id=WP_000533542.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2976283 2976411 . + . ID=gene-CCO40_RS14385;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=CCO40_RS14385;old_locus_tag=CCO40_14385 NZ_CP075116.1 Protein Homology CDS 2976283 2976411 . + 0 ID=cds-WP_001001755.1;Parent=gene-CCO40_RS14385;Dbxref=GenBank:WP_001001755.1;Name=WP_001001755.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=CCO40_RS14385;product=manganase accumulation protein MntS;protein_id=WP_001001755.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2976676 2978256 . + . ID=gene-CCO40_RS14390;Name=CCO40_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14390;old_locus_tag=CCO40_14390 NZ_CP075116.1 Protein Homology CDS 2976676 2978256 . + 0 ID=cds-WP_094889235.1;Parent=gene-CCO40_RS14390;Dbxref=GenBank:WP_094889235.1;Name=WP_094889235.1;Ontology_term=GO:0009244,GO:1900727,GO:0016776;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=CCO40_RS14390;product=phosphoethanolamine transferase;protein_id=WP_094889235.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2978320 2978835 . - . ID=gene-CCO40_RS14395;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=CCO40_RS14395;old_locus_tag=CCO40_14395 NZ_CP075116.1 Protein Homology CDS 2978320 2978835 . - 0 ID=cds-WP_000716763.1;Parent=gene-CCO40_RS14395;Dbxref=GenBank:WP_000716763.1;Name=WP_000716763.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459810.1;locus_tag=CCO40_RS14395;product=outer membrane protein OmpX;protein_id=WP_000716763.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2979189 2980076 . + . ID=gene-CCO40_RS14400;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=CCO40_RS14400;old_locus_tag=CCO40_14400 NZ_CP075116.1 Protein Homology CDS 2979189 2980076 . + 0 ID=cds-WP_001119554.1;Parent=gene-CCO40_RS14400;Dbxref=GenBank:WP_001119554.1;Name=WP_001119554.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=CCO40_RS14400;product=threonine/homoserine exporter RhtA;protein_id=WP_001119554.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2980379 2980882 . + . ID=gene-CCO40_RS14405;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=CCO40_RS14405;old_locus_tag=CCO40_14405 NZ_CP075116.1 Protein Homology CDS 2980379 2980882 . + 0 ID=cds-WP_000100805.1;Parent=gene-CCO40_RS14405;Dbxref=GenBank:WP_000100805.1;Name=WP_000100805.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=CCO40_RS14405;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100805.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2981359 2982105 . + . ID=gene-CCO40_RS14410;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=CCO40_RS14410;old_locus_tag=CCO40_14410 NZ_CP075116.1 Protein Homology CDS 2981359 2982105 . + 0 ID=cds-WP_000838671.1;Parent=gene-CCO40_RS14410;Dbxref=GenBank:WP_000838671.1;Name=WP_000838671.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=CCO40_RS14410;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_000838671.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2982251 2982910 . + . ID=gene-CCO40_RS14415;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=CCO40_RS14415;old_locus_tag=CCO40_14415 NZ_CP075116.1 Protein Homology CDS 2982251 2982910 . + 0 ID=cds-WP_001159076.1;Parent=gene-CCO40_RS14415;Dbxref=GenBank:WP_001159076.1;Name=WP_001159076.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=CCO40_RS14415;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159076.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2982907 2983629 . + . ID=gene-CCO40_RS14420;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=CCO40_RS14420;old_locus_tag=CCO40_14420 NZ_CP075116.1 Protein Homology CDS 2982907 2983629 . + 0 ID=cds-WP_000569093.1;Parent=gene-CCO40_RS14420;Dbxref=GenBank:WP_000569093.1;Name=WP_000569093.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=CCO40_RS14420;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_000569093.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2983748 2985970 . + . ID=gene-CCO40_RS14425;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=CCO40_RS14425;old_locus_tag=CCO40_14425 NZ_CP075116.1 Protein Homology CDS 2983748 2985970 . + 0 ID=cds-WP_023138451.1;Parent=gene-CCO40_RS14425;Dbxref=GenBank:WP_023138451.1;Name=WP_023138451.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=CCO40_RS14425;product=mechanosensitive channel protein;protein_id=WP_023138451.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2985967 2986893 . - . ID=gene-CCO40_RS14430;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=CCO40_RS14430;old_locus_tag=CCO40_14430 NZ_CP075116.1 Protein Homology CDS 2985967 2986893 . - 0 ID=cds-WP_001275962.1;Parent=gene-CCO40_RS14430;Dbxref=GenBank:WP_001275962.1;Name=WP_001275962.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=CCO40_RS14430;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_001275962.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2987098 2987364 . + . ID=gene-CCO40_RS14435;Name=CCO40_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14435;old_locus_tag=CCO40_14435 NZ_CP075116.1 Protein Homology CDS 2987098 2987364 . + 0 ID=cds-WP_000146330.1;Parent=gene-CCO40_RS14435;Dbxref=GenBank:WP_000146330.1;Name=WP_000146330.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459802.1;locus_tag=CCO40_RS14435;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_000146330.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2987649 2987909 . + . ID=gene-CCO40_RS14440;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=CCO40_RS14440;old_locus_tag=CCO40_14440 NZ_CP075116.1 Protein Homology CDS 2987649 2987909 . + 0 ID=cds-WP_000849089.1;Parent=gene-CCO40_RS14440;Dbxref=GenBank:WP_000849089.1;Name=WP_000849089.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459801.1;locus_tag=CCO40_RS14440;product=DUF1471 family protein YbiJ;protein_id=WP_000849089.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2988065 2989039 . - . ID=gene-CCO40_RS14445;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=CCO40_RS14445;old_locus_tag=CCO40_14445 NZ_CP075116.1 Protein Homology CDS 2988065 2989039 . - 0 ID=cds-WP_058107054.1;Parent=gene-CCO40_RS14445;Dbxref=GenBank:WP_058107054.1;Name=WP_058107054.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=CCO40_RS14445;product=DNA-binding protein YbiB;protein_id=WP_058107054.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2989069 2991213 . - . ID=gene-CCO40_RS14450;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=CCO40_RS14450;old_locus_tag=CCO40_14450 NZ_CP075116.1 Protein Homology CDS 2989069 2991213 . - 0 ID=cds-WP_001218630.1;Parent=gene-CCO40_RS14450;Dbxref=GenBank:WP_001218630.1;Name=WP_001218630.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=CCO40_RS14450;product=ATP-dependent DNA helicase DinG;protein_id=WP_001218630.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2991421 2992785 . - . ID=gene-CCO40_RS14455;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=CCO40_RS14455;old_locus_tag=CCO40_14455 NZ_CP075116.1 Protein Homology CDS 2991421 2992785 . - 0 ID=cds-WP_000007059.1;Parent=gene-CCO40_RS14455;Dbxref=GenBank:WP_000007059.1;Name=WP_000007059.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459798.1;locus_tag=CCO40_RS14455;product=ATP-dependent RNA helicase RhlE;protein_id=WP_000007059.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 2992973 2995579 . - . ID=gene-CCO40_RS14460;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=pseudogene;gene_synonym=adhC;locus_tag=CCO40_RS14460;old_locus_tag=CCO40_14460;partial=true;pseudo=true;start_range=.,2992973 NZ_CP075116.1 Protein Homology CDS 2992973 2995579 . - 0 ID=cds-CCO40_RS14460;Parent=gene-CCO40_RS14460;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227495.1;locus_tag=CCO40_RS14460;partial=true;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;pseudo=true;start_range=.,2992973;transl_table=11 NZ_CP075116.1 RefSeq gene 2995636 2996628 . - . ID=gene-CCO40_RS14465;Name=CCO40_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14465;old_locus_tag=CCO40_14465 NZ_CP075116.1 Protein Homology CDS 2995636 2996628 . - 0 ID=cds-WP_000083414.1;Parent=gene-CCO40_RS14465;Dbxref=GenBank:WP_000083414.1;Name=WP_000083414.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183482.1;locus_tag=CCO40_RS14465;product=transketolase family protein;protein_id=WP_000083414.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2996628 2997473 . - . ID=gene-CCO40_RS14470;Name=CCO40_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14470;old_locus_tag=CCO40_14470 NZ_CP075116.1 Protein Homology CDS 2996628 2997473 . - 0 ID=cds-WP_094889113.1;Parent=gene-CCO40_RS14470;Dbxref=GenBank:WP_094889113.1;Name=WP_094889113.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225957.1;locus_tag=CCO40_RS14470;product=transketolase;protein_id=WP_094889113.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2997487 2998236 . - . ID=gene-CCO40_RS14475;Name=CCO40_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14475;old_locus_tag=CCO40_14475 NZ_CP075116.1 Protein Homology CDS 2997487 2998236 . - 0 ID=cds-WP_000924697.1;Parent=gene-CCO40_RS14475;Dbxref=GenBank:WP_000924697.1;Name=WP_000924697.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225956.1;locus_tag=CCO40_RS14475;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_000924697.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2998287 2999618 . - . ID=gene-CCO40_RS14480;Name=CCO40_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14480;old_locus_tag=CCO40_14480 NZ_CP075116.1 Protein Homology CDS 2998287 2999618 . - 0 ID=cds-WP_001518324.1;Parent=gene-CCO40_RS14480;Dbxref=GenBank:WP_001518324.1;Name=WP_001518324.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225955.1;locus_tag=CCO40_RS14480;product=MFS transporter;protein_id=WP_001518324.1;transl_table=11 NZ_CP075116.1 RefSeq gene 2999957 3000880 . + . ID=gene-CCO40_RS14485;Name=CCO40_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14485;old_locus_tag=CCO40_14485 NZ_CP075116.1 Protein Homology CDS 2999957 3000880 . + 0 ID=cds-WP_001075547.1;Parent=gene-CCO40_RS14485;Dbxref=GenBank:WP_001075547.1;Name=WP_001075547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225953.1;locus_tag=CCO40_RS14485;product=LysR substrate-binding domain-containing protein;protein_id=WP_001075547.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3000954 3001628 . + . ID=gene-CCO40_RS14490;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=CCO40_RS14490;old_locus_tag=CCO40_14490 NZ_CP075116.1 Protein Homology CDS 3000954 3001628 . + 0 ID=cds-WP_001025254.1;Parent=gene-CCO40_RS14490;Dbxref=GenBank:WP_001025254.1;Name=WP_001025254.1;Ontology_term=GO:2000142,GO:0003700;gbkey=CDS;gene=cecR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459797.1;locus_tag=CCO40_RS14490;product=transcriptional regulator CecR;protein_id=WP_001025254.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3001628 3002623 . + . ID=gene-CCO40_RS14495;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=CCO40_RS14495;old_locus_tag=CCO40_14495 NZ_CP075116.1 Protein Homology CDS 3001628 3002623 . + 0 ID=cds-WP_058331836.1;Parent=gene-CCO40_RS14495;Dbxref=GenBank:WP_058331836.1;Name=WP_058331836.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=CCO40_RS14495;product=secretion protein HlyD;protein_id=WP_058331836.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3002616 3004352 . + . ID=gene-CCO40_RS14500;Name=CCO40_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14500;old_locus_tag=CCO40_14500 NZ_CP075116.1 Protein Homology CDS 3002616 3004352 . + 0 ID=cds-WP_094889114.1;Parent=gene-CCO40_RS14500;Dbxref=GenBank:WP_094889114.1;Name=WP_094889114.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459795.1;locus_tag=CCO40_RS14500;product=ATP-binding cassette domain-containing protein;protein_id=WP_094889114.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3004345 3005475 . + . ID=gene-CCO40_RS14505;Name=CCO40_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14505;old_locus_tag=CCO40_14505 NZ_CP075116.1 Protein Homology CDS 3004345 3005475 . + 0 ID=cds-WP_000045765.1;Parent=gene-CCO40_RS14505;Dbxref=GenBank:WP_000045765.1;Name=WP_000045765.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459794.1;locus_tag=CCO40_RS14505;product=ABC transporter permease;protein_id=WP_000045765.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3005591 3006697 . + . ID=gene-CCO40_RS14510;Name=CCO40_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14510;old_locus_tag=CCO40_14510 NZ_CP075116.1 Protein Homology CDS 3005591 3006697 . + 0 ID=cds-WP_000469050.1;Parent=gene-CCO40_RS14510;Dbxref=GenBank:WP_000469050.1;Name=WP_000469050.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459793.1;locus_tag=CCO40_RS14510;product=ABC transporter permease;protein_id=WP_000469050.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3006659 3007069 . - . ID=gene-CCO40_RS14515;Name=CCO40_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14515;old_locus_tag=CCO40_14515 NZ_CP075116.1 Protein Homology CDS 3006659 3007069 . - 0 ID=cds-WP_094889115.1;Parent=gene-CCO40_RS14515;Dbxref=GenBank:WP_094889115.1;Name=WP_094889115.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459792.1;locus_tag=CCO40_RS14515;product=YbhQ family protein;protein_id=WP_094889115.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3007202 3007960 . + . ID=gene-CCO40_RS14520;Name=CCO40_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14520;old_locus_tag=CCO40_14520 NZ_CP075116.1 Protein Homology CDS 3007202 3007960 . + 0 ID=cds-WP_000192039.1;Parent=gene-CCO40_RS14520;Dbxref=GenBank:WP_000192039.1;Name=WP_000192039.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=CCO40_RS14520;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_000192039.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3007957 3009198 . + . ID=gene-CCO40_RS14525;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=CCO40_RS14525;old_locus_tag=CCO40_14525 NZ_CP075116.1 Protein Homology CDS 3007957 3009198 . + 0 ID=cds-WP_000649639.1;Parent=gene-CCO40_RS14525;Dbxref=GenBank:WP_000649639.1;Name=WP_000649639.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459790.1;locus_tag=CCO40_RS14525;product=cardiolipin synthase ClsB;protein_id=WP_000649639.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3009198 3010160 . + . ID=gene-CCO40_RS14530;Name=CCO40_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14530;old_locus_tag=CCO40_14530 NZ_CP075116.1 Protein Homology CDS 3009198 3010160 . + 0 ID=cds-WP_080189670.1;Parent=gene-CCO40_RS14530;Dbxref=GenBank:WP_080189670.1;Name=WP_080189670.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459789.1;locus_tag=CCO40_RS14530;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=WP_080189670.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3010163 3010723 . - . ID=gene-CCO40_RS14535;Name=CCO40_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14535;old_locus_tag=CCO40_14535 NZ_CP075116.1 Protein Homology CDS 3010163 3010723 . - 0 ID=cds-WP_001052196.1;Parent=gene-CCO40_RS14535;Dbxref=GenBank:WP_001052196.1;Name=WP_001052196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459788.1;locus_tag=CCO40_RS14535;product=hypothetical protein;protein_id=WP_001052196.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3010731 3011339 . - . ID=gene-CCO40_RS14540;Name=CCO40_RS14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14540;old_locus_tag=CCO40_14540 NZ_CP075116.1 Protein Homology CDS 3010731 3011339 . - 0 ID=cds-WP_077905247.1;Parent=gene-CCO40_RS14540;Dbxref=GenBank:WP_077905247.1;Name=WP_077905247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459787.1;locus_tag=CCO40_RS14540;product=hypothetical protein;protein_id=WP_077905247.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3011363 3012070 . - . ID=gene-CCO40_RS14545;Name=CCO40_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14545;old_locus_tag=CCO40_14545 NZ_CP075116.1 Protein Homology CDS 3011363 3012070 . - 0 ID=cds-WP_000529065.1;Parent=gene-CCO40_RS14545;Dbxref=GenBank:WP_000529065.1;Name=WP_000529065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459786.1;locus_tag=CCO40_RS14545;product=Bax inhibitor-1 family protein;protein_id=WP_000529065.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3012216 3012920 . - . ID=gene-CCO40_RS14550;Name=CCO40_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14550;old_locus_tag=CCO40_14550 NZ_CP075116.1 Protein Homology CDS 3012216 3012920 . - 0 ID=cds-WP_000373611.1;Parent=gene-CCO40_RS14550;Dbxref=GenBank:WP_000373611.1;Name=WP_000373611.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459785.1;locus_tag=CCO40_RS14550;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000373611.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3012968 3013420 . - . ID=gene-CCO40_RS14555;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=CCO40_RS14555;old_locus_tag=CCO40_14555 NZ_CP075116.1 Protein Homology CDS 3012968 3013420 . - 0 ID=cds-WP_064013056.1;Parent=gene-CCO40_RS14555;Dbxref=GenBank:WP_064013056.1;Name=WP_064013056.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459784.1;locus_tag=CCO40_RS14555;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_064013056.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3013422 3013667 . - . ID=gene-CCO40_RS14560;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=CCO40_RS14560;old_locus_tag=CCO40_14560 NZ_CP075116.1 Protein Homology CDS 3013422 3013667 . - 0 ID=cds-WP_000598596.1;Parent=gene-CCO40_RS14560;Dbxref=GenBank:WP_000598596.1;Name=WP_000598596.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308889.1;locus_tag=CCO40_RS14560;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598596.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3013660 3014145 . - . ID=gene-CCO40_RS14565;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=CCO40_RS14565;old_locus_tag=CCO40_14565 NZ_CP075116.1 Protein Homology CDS 3013660 3014145 . - 0 ID=cds-WP_000080894.1;Parent=gene-CCO40_RS14565;Dbxref=GenBank:WP_000080894.1;Name=WP_000080894.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=CCO40_RS14565;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_000080894.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3014148 3014660 . - . ID=gene-CCO40_RS14570;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=CCO40_RS14570;old_locus_tag=CCO40_14570 NZ_CP075116.1 Protein Homology CDS 3014148 3014660 . - 0 ID=cds-WP_000084604.1;Parent=gene-CCO40_RS14570;Dbxref=GenBank:WP_000084604.1;Name=WP_000084604.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=CCO40_RS14570;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084604.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3014682 3015671 . - . ID=gene-CCO40_RS14575;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=CCO40_RS14575;old_locus_tag=CCO40_14575 NZ_CP075116.1 Protein Homology CDS 3014682 3015671 . - 0 ID=cds-WP_000168186.1;Parent=gene-CCO40_RS14575;Dbxref=GenBank:WP_000168186.1;Name=WP_000168186.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459780.1;locus_tag=CCO40_RS14575;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_000168186.1;transl_table=11 NZ_CP075116.1 cmsearch riboswitch 3015659 3015803 . - . ID=id-NZ_CP075116.1:3015659..3015803;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF01055,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CP075116.1 RefSeq gene 3016068 3016976 . + . ID=gene-CCO40_RS14580;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=CCO40_RS14580;old_locus_tag=CCO40_14580 NZ_CP075116.1 Protein Homology CDS 3016068 3016976 . + 0 ID=cds-WP_001246033.1;Parent=gene-CCO40_RS14580;Dbxref=GenBank:WP_001246033.1;Name=WP_001246033.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459779.1;locus_tag=CCO40_RS14580;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_001246033.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3017068 3019365 . - . ID=gene-CCO40_RS14585;Name=slrP;gbkey=Gene;gene=slrP;gene_biotype=protein_coding;locus_tag=CCO40_RS14585;old_locus_tag=CCO40_14585 NZ_CP075116.1 Protein Homology CDS 3017068 3019365 . - 0 ID=cds-WP_094889116.1;Parent=gene-CCO40_RS14585;Dbxref=GenBank:WP_094889116.1;Name=WP_094889116.1;gbkey=CDS;gene=slrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459778.1;locus_tag=CCO40_RS14585;product=SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP;protein_id=WP_094889116.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3019373 3019547 . - . ID=gene-CCO40_RS22515;Name=CCO40_RS22515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22515;pseudo=true NZ_CP075116.1 Protein Homology CDS 3019373 3019547 . - 0 ID=cds-CCO40_RS22515;Parent=gene-CCO40_RS22515;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447236.1;locus_tag=CCO40_RS22515;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 3019856 3021877 . - . ID=gene-CCO40_RS14590;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=CCO40_RS14590;old_locus_tag=CCO40_14590 NZ_CP075116.1 Protein Homology CDS 3019856 3021877 . - 0 ID=cds-WP_000042502.1;Parent=gene-CCO40_RS14590;Dbxref=GenBank:WP_000042502.1;Name=WP_000042502.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=CCO40_RS14590;product=excinuclease ABC subunit UvrB;protein_id=WP_000042502.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3022528 3023214 . - . ID=gene-CCO40_RS14595;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=CCO40_RS14595;old_locus_tag=CCO40_14595 NZ_CP075116.1 Protein Homology CDS 3022528 3023214 . - 0 ID=cds-WP_000167218.1;Parent=gene-CCO40_RS14595;Dbxref=GenBank:WP_000167218.1;Name=WP_000167218.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459775.1;locus_tag=CCO40_RS14595;product=dethiobiotin synthase;protein_id=WP_000167218.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3023207 3023962 . - . ID=gene-CCO40_RS14600;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=CCO40_RS14600;old_locus_tag=CCO40_14600 NZ_CP075116.1 Protein Homology CDS 3023207 3023962 . - 0 ID=cds-WP_000079914.1;Parent=gene-CCO40_RS14600;Dbxref=GenBank:WP_000079914.1;Name=WP_000079914.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459774.1;locus_tag=CCO40_RS14600;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_000079914.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3023946 3025103 . - . ID=gene-CCO40_RS14605;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=CCO40_RS14605;old_locus_tag=CCO40_14605 NZ_CP075116.1 Protein Homology CDS 3023946 3025103 . - 0 ID=cds-WP_024157458.1;Parent=gene-CCO40_RS14605;Dbxref=GenBank:WP_024157458.1;Name=WP_024157458.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459773.1;locus_tag=CCO40_RS14605;product=8-amino-7-oxononanoate synthase;protein_id=WP_024157458.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3025100 3026140 . - . ID=gene-CCO40_RS14610;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=CCO40_RS14610;old_locus_tag=CCO40_14610 NZ_CP075116.1 Protein Homology CDS 3025100 3026140 . - 0 ID=cds-WP_000090729.1;Parent=gene-CCO40_RS14610;Dbxref=GenBank:WP_000090729.1;Name=WP_000090729.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459772.1;locus_tag=CCO40_RS14610;product=biotin synthase BioB;protein_id=WP_000090729.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3026227 3027516 . + . ID=gene-CCO40_RS14615;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=CCO40_RS14615;old_locus_tag=CCO40_14615 NZ_CP075116.1 Protein Homology CDS 3026227 3027516 . + 0 ID=cds-WP_000205504.1;Parent=gene-CCO40_RS14615;Dbxref=GenBank:WP_000205504.1;Name=WP_000205504.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=S-adenosyl-L-methionine:8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459771.1;locus_tag=CCO40_RS14615;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_000205504.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3027574 3028050 . + . ID=gene-CCO40_RS14620;Name=CCO40_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14620;old_locus_tag=CCO40_14620 NZ_CP075116.1 Protein Homology CDS 3027574 3028050 . + 0 ID=cds-WP_000767405.1;Parent=gene-CCO40_RS14620;Dbxref=GenBank:WP_000767405.1;Name=WP_000767405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459770.1;locus_tag=CCO40_RS14620;product=kinase inhibitor;protein_id=WP_000767405.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3028135 3029655 . - . ID=gene-CCO40_RS14625;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=CCO40_RS14625;old_locus_tag=CCO40_14625 NZ_CP075116.1 Protein Homology CDS 3028135 3029655 . - 0 ID=cds-WP_001095228.1;Parent=gene-CCO40_RS14625;Dbxref=GenBank:WP_001095228.1;Name=WP_001095228.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=CCO40_RS14625;product=histidine ammonia-lyase;protein_id=WP_001095228.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3029657 3031342 . - . ID=gene-CCO40_RS14630;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=CCO40_RS14630;old_locus_tag=CCO40_14630 NZ_CP075116.1 Protein Homology CDS 3029657 3031342 . - 0 ID=cds-WP_001115209.1;Parent=gene-CCO40_RS14630;Dbxref=GenBank:WP_001115209.1;Name=WP_001115209.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441920.1;locus_tag=CCO40_RS14630;product=urocanate hydratase;protein_id=WP_001115209.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3031539 3032264 . - . ID=gene-CCO40_RS14635;Name=CCO40_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14635;old_locus_tag=CCO40_14635 NZ_CP075116.1 Protein Homology CDS 3031539 3032264 . - 0 ID=cds-WP_000287413.1;Parent=gene-CCO40_RS14635;Dbxref=GenBank:WP_000287413.1;Name=WP_000287413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459768.1;locus_tag=CCO40_RS14635;product=histidine utilization repressor;protein_id=WP_000287413.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3032309 3033250 . - . ID=gene-CCO40_RS14640;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=CCO40_RS14640;old_locus_tag=CCO40_14640 NZ_CP075116.1 Protein Homology CDS 3032309 3033250 . - 0 ID=cds-WP_000195688.1;Parent=gene-CCO40_RS14640;Dbxref=GenBank:WP_000195688.1;Name=WP_000195688.1;Ontology_term=GO:0006548,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459767.1;locus_tag=CCO40_RS14640;product=formimidoylglutamase;protein_id=WP_000195688.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3033247 3034470 . - . ID=gene-CCO40_RS14645;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=CCO40_RS14645;old_locus_tag=CCO40_14645 NZ_CP075116.1 Protein Homology CDS 3033247 3034470 . - 0 ID=cds-WP_094889117.1;Parent=gene-CCO40_RS14645;Dbxref=GenBank:WP_094889117.1;Name=WP_094889117.1;Ontology_term=GO:0006548,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459766.1;locus_tag=CCO40_RS14645;product=imidazolonepropionase;protein_id=WP_094889117.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3034708 3035991 . + . ID=gene-CCO40_RS14650;Name=CCO40_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14650;old_locus_tag=CCO40_14650 NZ_CP075116.1 Protein Homology CDS 3034708 3035991 . + 0 ID=cds-WP_001094766.1;Parent=gene-CCO40_RS14650;Dbxref=GenBank:WP_001094766.1;Name=WP_001094766.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=CCO40_RS14650;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001094766.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3036135 3037130 . - . ID=gene-CCO40_RS14655;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;gene_synonym=ybhE;locus_tag=CCO40_RS14655;old_locus_tag=CCO40_14655 NZ_CP075116.1 Protein Homology CDS 3036135 3037130 . - 0 ID=cds-WP_094889118.1;Parent=gene-CCO40_RS14655;Dbxref=GenBank:WP_094889118.1;Name=WP_094889118.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=CCO40_RS14655;product=6-phosphogluconolactonase;protein_id=WP_094889118.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3037294 3038112 . + . ID=gene-CCO40_RS14660;Name=CCO40_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14660;old_locus_tag=CCO40_14660 NZ_CP075116.1 Protein Homology CDS 3037294 3038112 . + 0 ID=cds-WP_001682285.1;Parent=gene-CCO40_RS14660;Dbxref=GenBank:WP_001682285.1;Name=WP_001682285.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=CCO40_RS14660;product=pyridoxal phosphatase;protein_id=WP_001682285.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3038113 3039171 . - . ID=gene-CCO40_RS14665;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=CCO40_RS14665;old_locus_tag=CCO40_14665 NZ_CP075116.1 Protein Homology CDS 3038113 3039171 . - 0 ID=cds-WP_000891715.1;Parent=gene-CCO40_RS14665;Dbxref=GenBank:WP_000891715.1;Name=WP_000891715.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=CCO40_RS14665;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_000891715.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3039174 3039863 . - . ID=gene-CCO40_RS14670;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=CCO40_RS14670;old_locus_tag=CCO40_14670 NZ_CP075116.1 Protein Homology CDS 3039174 3039863 . - 0 ID=cds-WP_000604026.1;Parent=gene-CCO40_RS14670;Dbxref=GenBank:WP_000604026.1;Name=WP_000604026.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459761.1;locus_tag=CCO40_RS14670;product=molybdate ABC transporter permease subunit;protein_id=WP_000604026.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3039863 3040636 . - . ID=gene-CCO40_RS14675;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=CCO40_RS14675;old_locus_tag=CCO40_14675 NZ_CP075116.1 Protein Homology CDS 3039863 3040636 . - 0 ID=cds-WP_000951408.1;Parent=gene-CCO40_RS14675;Dbxref=GenBank:WP_000951408.1;Name=WP_000951408.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459760.1;locus_tag=CCO40_RS14675;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_000951408.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3040803 3040952 . - . ID=gene-CCO40_RS14680;Name=CCO40_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14680;old_locus_tag=CCO40_14680 NZ_CP075116.1 Protein Homology CDS 3040803 3040952 . - 0 ID=cds-WP_000891513.1;Parent=gene-CCO40_RS14680;Dbxref=GenBank:WP_000891513.1;Name=WP_000891513.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459759.1;locus_tag=CCO40_RS14680;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_000891513.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3041081 3041869 . + . ID=gene-CCO40_RS14685;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=CCO40_RS14685;old_locus_tag=CCO40_14685 NZ_CP075116.1 Protein Homology CDS 3041081 3041869 . + 0 ID=cds-WP_001147413.1;Parent=gene-CCO40_RS14685;Dbxref=GenBank:WP_001147413.1;Name=WP_001147413.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459758.1;locus_tag=CCO40_RS14685;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147413.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3041937 3043412 . + . ID=gene-CCO40_RS14690;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=CCO40_RS14690;old_locus_tag=CCO40_14690 NZ_CP075116.1 Protein Homology CDS 3041937 3043412 . + 0 ID=cds-WP_000096941.1;Parent=gene-CCO40_RS14690;Dbxref=GenBank:WP_000096941.1;Name=WP_000096941.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459757.1;locus_tag=CCO40_RS14690;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_000096941.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3043583 3044491 . + . ID=gene-CCO40_RS14695;Name=CCO40_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14695;old_locus_tag=CCO40_14695 NZ_CP075116.1 Protein Homology CDS 3043583 3044491 . + 0 ID=cds-WP_000885519.1;Parent=gene-CCO40_RS14695;Dbxref=GenBank:WP_000885519.1;Name=WP_000885519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459756.1;locus_tag=CCO40_RS14695;product=DUF2167 domain-containing protein;protein_id=WP_000885519.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3044714 3045730 . + . ID=gene-CCO40_RS14700;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=CCO40_RS14700;old_locus_tag=CCO40_14700 NZ_CP075116.1 Protein Homology CDS 3044714 3045730 . + 0 ID=cds-WP_001265465.1;Parent=gene-CCO40_RS14700;Dbxref=GenBank:WP_001265465.1;Name=WP_001265465.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459755.1;locus_tag=CCO40_RS14700;product=UDP-glucose 4-epimerase GalE;protein_id=WP_001265465.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3045741 3046787 . + . ID=gene-CCO40_RS14705;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=CCO40_RS14705;old_locus_tag=CCO40_14705 NZ_CP075116.1 Protein Homology CDS 3045741 3046787 . + 0 ID=cds-WP_000187473.1;Parent=gene-CCO40_RS14705;Dbxref=GenBank:WP_000187473.1;Name=WP_000187473.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459754.1;locus_tag=CCO40_RS14705;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_000187473.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3046790 3047938 . + . ID=gene-CCO40_RS14710;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=CCO40_RS14710;old_locus_tag=CCO40_14710 NZ_CP075116.1 Protein Homology CDS 3046790 3047938 . + 0 ID=cds-WP_001049365.1;Parent=gene-CCO40_RS14710;Dbxref=GenBank:WP_001049365.1;Name=WP_001049365.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=CCO40_RS14710;product=galactokinase;protein_id=WP_001049365.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3047932 3048972 . + . ID=gene-CCO40_RS14715;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=CCO40_RS14715;old_locus_tag=CCO40_14715 NZ_CP075116.1 Protein Homology CDS 3047932 3048972 . + 0 ID=cds-WP_000931434.1;Parent=gene-CCO40_RS14715;Dbxref=GenBank:WP_000931434.1;Name=WP_000931434.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459752.1;locus_tag=CCO40_RS14715;product=galactose-1-epimerase;protein_id=WP_000931434.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3049196 3049948 . + . ID=gene-CCO40_RS14720;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=CCO40_RS14720;old_locus_tag=CCO40_14720 NZ_CP075116.1 Protein Homology CDS 3049196 3049948 . + 0 ID=cds-WP_000301556.1;Parent=gene-CCO40_RS14720;Dbxref=GenBank:WP_000301556.1;Name=WP_000301556.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=CCO40_RS14720;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_000301556.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3050039 3050815 . - . ID=gene-CCO40_RS14725;Name=CCO40_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14725;old_locus_tag=CCO40_14725 NZ_CP075116.1 Protein Homology CDS 3050039 3050815 . - 0 ID=cds-WP_001214710.1;Parent=gene-CCO40_RS14725;Dbxref=GenBank:WP_001214710.1;Name=WP_001214710.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459750.1;locus_tag=CCO40_RS14725;product=ABC transporter ATP-binding protein;protein_id=WP_001214710.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3050815 3051894 . - . ID=gene-CCO40_RS14730;Name=CCO40_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14730;old_locus_tag=CCO40_14730 NZ_CP075116.1 Protein Homology CDS 3050815 3051894 . - 0 ID=cds-WP_000128339.1;Parent=gene-CCO40_RS14730;Dbxref=GenBank:WP_000128339.1;Name=WP_000128339.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459749.1;locus_tag=CCO40_RS14730;product=FecCD family ABC transporter permease;protein_id=WP_000128339.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3052274 3052972 . - . ID=gene-CCO40_RS14735;Name=CCO40_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14735;old_locus_tag=CCO40_14735 NZ_CP075116.1 Protein Homology CDS 3052274 3052972 . - 0 ID=cds-WP_001006000.1;Parent=gene-CCO40_RS14735;Dbxref=GenBank:WP_001006000.1;Name=WP_001006000.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459748.1;locus_tag=CCO40_RS14735;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_001006000.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3053125 3054426 . - . ID=gene-CCO40_RS14740;Name=CCO40_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14740;old_locus_tag=CCO40_14740 NZ_CP075116.1 Protein Homology CDS 3053125 3054426 . - 0 ID=cds-WP_000444790.1;Parent=gene-CCO40_RS14740;Dbxref=GenBank:WP_000444790.1;Name=WP_000444790.1;Ontology_term=GO:0006814,GO:0015451,GO:0016829;gbkey=CDS;go_function=decarboxylation-driven active transmembrane transporter activity|0015451||IEA,lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459747.1;locus_tag=CCO40_RS14740;product=oxalacetate decarboxylase subunit beta;protein_id=WP_000444790.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3054442 3056211 . - . ID=gene-CCO40_RS14745;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=CCO40_RS14745;old_locus_tag=CCO40_14745 NZ_CP075116.1 Protein Homology CDS 3054442 3056211 . - 0 ID=cds-WP_000214945.1;Parent=gene-CCO40_RS14745;Dbxref=GenBank:WP_000214945.1;Name=WP_000214945.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=CCO40_RS14745;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_000214945.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3056227 3056472 . - . ID=gene-CCO40_RS14750;Name=CCO40_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14750;old_locus_tag=CCO40_14750 NZ_CP075116.1 Protein Homology CDS 3056227 3056472 . - 0 ID=cds-WP_001089088.1;Parent=gene-CCO40_RS14750;Dbxref=GenBank:WP_001089088.1;Name=WP_001089088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459746.1;locus_tag=CCO40_RS14750;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_001089088.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3056522 3057790 . - . ID=gene-CCO40_RS14755;Name=CCO40_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14755;old_locus_tag=CCO40_14755 NZ_CP075116.1 Protein Homology CDS 3056522 3057790 . - 0 ID=cds-WP_000074128.1;Parent=gene-CCO40_RS14755;Dbxref=GenBank:WP_000074128.1;Name=WP_000074128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000074132.1;locus_tag=CCO40_RS14755;product=SLC13 family permease;protein_id=WP_000074128.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3058013 3058996 . + . ID=gene-CCO40_RS14760;Name=CCO40_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14760;old_locus_tag=CCO40_14760 NZ_CP075116.1 Protein Homology CDS 3058013 3058996 . + 0 ID=cds-WP_000282119.1;Parent=gene-CCO40_RS14760;Dbxref=GenBank:WP_000282119.1;Name=WP_000282119.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459744.1;locus_tag=CCO40_RS14760;product=LysR family transcriptional regulator;protein_id=WP_000282119.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3058997 3059887 . - . ID=gene-CCO40_RS14765;Name=CCO40_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14765;old_locus_tag=CCO40_14765 NZ_CP075116.1 Protein Homology CDS 3058997 3059887 . - 0 ID=cds-WP_000405923.1;Parent=gene-CCO40_RS14765;Dbxref=GenBank:WP_000405923.1;Name=WP_000405923.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539513.1;locus_tag=CCO40_RS14765;product=LysR family transcriptional regulator;protein_id=WP_000405923.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3060017 3060862 . + . ID=gene-CCO40_RS14770;Name=CCO40_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14770;old_locus_tag=CCO40_14770 NZ_CP075116.1 Protein Homology CDS 3060017 3060862 . + 0 ID=cds-WP_000086831.1;Parent=gene-CCO40_RS14770;Dbxref=GenBank:WP_000086831.1;Name=WP_000086831.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459742.1;locus_tag=CCO40_RS14770;product=fumarate hydratase;protein_id=WP_000086831.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3060877 3061422 . + . ID=gene-CCO40_RS14775;Name=CCO40_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14775;old_locus_tag=CCO40_14775 NZ_CP075116.1 Protein Homology CDS 3060877 3061422 . + 0 ID=cds-WP_000970374.1;Parent=gene-CCO40_RS14775;Dbxref=GenBank:WP_000970374.1;Name=WP_000970374.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459741.1;locus_tag=CCO40_RS14775;product=FumA C-terminus/TtdB family hydratase beta subunit;protein_id=WP_000970374.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3061516 3062568 . - . ID=gene-CCO40_RS14780;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=CCO40_RS14780;old_locus_tag=CCO40_14780 NZ_CP075116.1 Protein Homology CDS 3061516 3062568 . - 0 ID=cds-WP_001109233.1;Parent=gene-CCO40_RS14780;Dbxref=GenBank:WP_001109233.1;Name=WP_001109233.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=CCO40_RS14780;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_001109233.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3062888 3063274 . + . ID=gene-CCO40_RS14785;Name=CCO40_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14785;old_locus_tag=CCO40_14785 NZ_CP075116.1 Protein Homology CDS 3062888 3063274 . + 0 ID=cds-WP_000784381.1;Parent=gene-CCO40_RS14785;Dbxref=GenBank:WP_000784381.1;Name=WP_000784381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459739.1;locus_tag=CCO40_RS14785;product=YbgS-like family protein;protein_id=WP_000784381.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3063385 3064323 . + . ID=gene-CCO40_RS14790;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=CCO40_RS14790;old_locus_tag=CCO40_14790 NZ_CP075116.1 Protein Homology CDS 3063385 3064323 . + 0 ID=cds-WP_000951239.1;Parent=gene-CCO40_RS14790;Dbxref=GenBank:WP_000951239.1;Name=WP_000951239.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459738.1;locus_tag=CCO40_RS14790;product=CDF family zinc transporter ZitB;protein_id=WP_000951239.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3064320 3065039 . - . ID=gene-CCO40_RS14795;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=CCO40_RS14795;old_locus_tag=CCO40_14795 NZ_CP075116.1 Protein Homology CDS 3064320 3065039 . - 0 ID=cds-WP_000345368.1;Parent=gene-CCO40_RS14795;Dbxref=GenBank:WP_000345368.1;Name=WP_000345368.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459737.1;locus_tag=CCO40_RS14795;product=nicotinamide riboside transporter PnuC;protein_id=WP_000345368.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3065064 3066107 . - . ID=gene-CCO40_RS14800;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=CCO40_RS14800;old_locus_tag=CCO40_14800 NZ_CP075116.1 Protein Homology CDS 3065064 3066107 . - 0 ID=cds-WP_000115347.1;Parent=gene-CCO40_RS14800;Dbxref=GenBank:WP_000115347.1;Name=WP_000115347.1;Ontology_term=GO:0019363,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=CCO40_RS14800;product=quinolinate synthase NadA;protein_id=WP_000115347.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3066402 3066526 . - . ID=gene-CCO40_RS14805;Name=CCO40_RS14805;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO40_RS14805;old_locus_tag=CCO40_14805 NZ_CP075116.1 cmsearch ncRNA 3066402 3066526 . - . ID=rna-CCO40_RS14805;Parent=gene-CCO40_RS14805;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00391,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS14805;product=RtT sRNA NZ_CP075116.1 cmsearch exon 3066402 3066526 . - . ID=exon-CCO40_RS14805-1;Parent=rna-CCO40_RS14805;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00391,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS14805;product=RtT sRNA NZ_CP075116.1 RefSeq gene 3066556 3066681 . - . ID=gene-CCO40_RS14810;Name=CCO40_RS14810;gbkey=Gene;gene_biotype=ncRNA;locus_tag=CCO40_RS14810;old_locus_tag=CCO40_14810 NZ_CP075116.1 cmsearch ncRNA 3066556 3066681 . - . ID=rna-CCO40_RS14810;Parent=gene-CCO40_RS14810;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00391,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS14810;product=RtT sRNA NZ_CP075116.1 cmsearch exon 3066556 3066681 . - . ID=exon-CCO40_RS14810-1;Parent=rna-CCO40_RS14810;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00391,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS14810;product=RtT sRNA NZ_CP075116.1 RefSeq gene 3066711 3066786 . - . ID=gene-CCO40_RS14815;Name=CCO40_RS14815;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS14815;old_locus_tag=CCO40_14815 NZ_CP075116.1 tRNAscan-SE tRNA 3066711 3066786 . - . ID=rna-CCO40_RS14815;Parent=gene-CCO40_RS14815;anticodon=(pos:complement(3066751..3066753));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS14815;product=tRNA-Lys NZ_CP075116.1 tRNAscan-SE exon 3066711 3066786 . - . ID=exon-CCO40_RS14815-1;Parent=rna-CCO40_RS14815;anticodon=(pos:complement(3066751..3066753));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS14815;product=tRNA-Lys NZ_CP075116.1 RefSeq gene 3066921 3066996 . - . ID=gene-CCO40_RS14820;Name=CCO40_RS14820;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS14820;old_locus_tag=CCO40_14820 NZ_CP075116.1 tRNAscan-SE tRNA 3066921 3066996 . - . ID=rna-CCO40_RS14820;Parent=gene-CCO40_RS14820;anticodon=(pos:complement(3066961..3066963));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS14820;product=tRNA-Lys NZ_CP075116.1 tRNAscan-SE exon 3066921 3066996 . - . ID=exon-CCO40_RS14820-1;Parent=rna-CCO40_RS14820;anticodon=(pos:complement(3066961..3066963));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS14820;product=tRNA-Lys NZ_CP075116.1 RefSeq gene 3067046 3067121 . - . ID=gene-CCO40_RS14825;Name=CCO40_RS14825;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS14825;old_locus_tag=CCO40_14825 NZ_CP075116.1 tRNAscan-SE tRNA 3067046 3067121 . - . ID=rna-CCO40_RS14825;Parent=gene-CCO40_RS14825;anticodon=(pos:complement(3067086..3067088));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS14825;product=tRNA-Lys NZ_CP075116.1 tRNAscan-SE exon 3067046 3067121 . - . ID=exon-CCO40_RS14825-1;Parent=rna-CCO40_RS14825;anticodon=(pos:complement(3067086..3067088));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS14825;product=tRNA-Lys NZ_CP075116.1 RefSeq gene 3067125 3067200 . - . ID=gene-CCO40_RS14830;Name=CCO40_RS14830;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS14830;old_locus_tag=CCO40_14830 NZ_CP075116.1 tRNAscan-SE tRNA 3067125 3067200 . - . ID=rna-CCO40_RS14830;Parent=gene-CCO40_RS14830;anticodon=(pos:complement(3067165..3067167));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS14830;product=tRNA-Val NZ_CP075116.1 tRNAscan-SE exon 3067125 3067200 . - . ID=exon-CCO40_RS14830-1;Parent=rna-CCO40_RS14830;anticodon=(pos:complement(3067165..3067167));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS14830;product=tRNA-Val NZ_CP075116.1 RefSeq gene 3067332 3067407 . - . ID=gene-CCO40_RS14835;Name=CCO40_RS14835;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS14835;old_locus_tag=CCO40_14835 NZ_CP075116.1 tRNAscan-SE tRNA 3067332 3067407 . - . ID=rna-CCO40_RS14835;Parent=gene-CCO40_RS14835;anticodon=(pos:complement(3067372..3067374));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS14835;product=tRNA-Lys NZ_CP075116.1 tRNAscan-SE exon 3067332 3067407 . - . ID=exon-CCO40_RS14835-1;Parent=rna-CCO40_RS14835;anticodon=(pos:complement(3067372..3067374));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS14835;product=tRNA-Lys NZ_CP075116.1 RefSeq gene 3067572 3068360 . - . ID=gene-CCO40_RS14840;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=CCO40_RS14840;old_locus_tag=CCO40_14840 NZ_CP075116.1 Protein Homology CDS 3067572 3068360 . - 0 ID=cds-WP_000097552.1;Parent=gene-CCO40_RS14840;Dbxref=GenBank:WP_000097552.1;Name=WP_000097552.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459735.1;locus_tag=CCO40_RS14840;product=cell division protein CpoB;protein_id=WP_000097552.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3068370 3068894 . - . ID=gene-CCO40_RS14845;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=CCO40_RS14845;old_locus_tag=CCO40_14845 NZ_CP075116.1 Protein Homology CDS 3068370 3068894 . - 0 ID=cds-WP_001176621.1;Parent=gene-CCO40_RS14845;Dbxref=GenBank:WP_001176621.1;Name=WP_001176621.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459734.1;locus_tag=CCO40_RS14845;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001176621.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3068929 3070221 . - . ID=gene-CCO40_RS14850;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=CCO40_RS14850;old_locus_tag=CCO40_14850 NZ_CP075116.1 Protein Homology CDS 3068929 3070221 . - 0 ID=cds-WP_001562341.1;Parent=gene-CCO40_RS14850;Dbxref=GenBank:WP_001562341.1;Name=WP_001562341.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=CCO40_RS14850;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_001562341.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3070345 3071523 . - . ID=gene-CCO40_RS14855;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=CCO40_RS14855;old_locus_tag=CCO40_14855 NZ_CP075116.1 Protein Homology CDS 3070345 3071523 . - 0 ID=cds-WP_000030587.1;Parent=gene-CCO40_RS14855;Dbxref=GenBank:WP_000030587.1;Name=WP_000030587.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=CCO40_RS14855;product=cell envelope integrity protein TolA;protein_id=WP_000030587.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3071588 3072016 . - . ID=gene-CCO40_RS14860;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=CCO40_RS14860;old_locus_tag=CCO40_14860 NZ_CP075116.1 Protein Homology CDS 3071588 3072016 . - 0 ID=cds-WP_000124676.1;Parent=gene-CCO40_RS14860;Dbxref=GenBank:WP_000124676.1;Name=WP_000124676.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=CCO40_RS14860;product=colicin uptake protein TolR;protein_id=WP_000124676.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3072020 3072712 . - . ID=gene-CCO40_RS14865;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=CCO40_RS14865;old_locus_tag=CCO40_14865 NZ_CP075116.1 Protein Homology CDS 3072020 3072712 . - 0 ID=cds-WP_000131318.1;Parent=gene-CCO40_RS14865;Dbxref=GenBank:WP_000131318.1;Name=WP_000131318.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459730.1;locus_tag=CCO40_RS14865;product=Tol-Pal system protein TolQ;protein_id=WP_000131318.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3072709 3073113 . - . ID=gene-CCO40_RS14870;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=CCO40_RS14870;old_locus_tag=CCO40_14870 NZ_CP075116.1 Protein Homology CDS 3072709 3073113 . - 0 ID=cds-WP_001046240.1;Parent=gene-CCO40_RS14870;Dbxref=GenBank:WP_001046240.1;Name=WP_001046240.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459729.1;locus_tag=CCO40_RS14870;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001046240.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3073342 3073635 . - . ID=gene-CCO40_RS14875;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=CCO40_RS14875;old_locus_tag=CCO40_14875 NZ_CP075116.1 Protein Homology CDS 3073342 3073635 . - 0 ID=cds-WP_000148790.1;Parent=gene-CCO40_RS14875;Dbxref=GenBank:WP_000148790.1;Name=WP_000148790.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006712473.1;locus_tag=CCO40_RS14875;product=cyd operon protein YbgE;protein_id=WP_000148790.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3073635 3073748 . - . ID=gene-CCO40_RS14880;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;gene_synonym=ybgT;locus_tag=CCO40_RS14880;old_locus_tag=CCO40_14880 NZ_CP075116.1 Protein Homology CDS 3073635 3073748 . - 0 ID=cds-WP_000270278.1;Parent=gene-CCO40_RS14880;Dbxref=GenBank:WP_000270278.1;Name=WP_000270278.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459727.1;locus_tag=CCO40_RS14880;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270278.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3073763 3074902 . - . ID=gene-CCO40_RS14885;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=CCO40_RS14885;old_locus_tag=CCO40_14885 NZ_CP075116.1 Protein Homology CDS 3073763 3074902 . - 0 ID=cds-WP_000568258.1;Parent=gene-CCO40_RS14885;Dbxref=GenBank:WP_000568258.1;Name=WP_000568258.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=CCO40_RS14885;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000568258.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3074918 3076486 . - . ID=gene-CCO40_RS14890;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=CCO40_RS14890;old_locus_tag=CCO40_14890 NZ_CP075116.1 Protein Homology CDS 3074918 3076486 . - 0 ID=cds-WP_000884369.1;Parent=gene-CCO40_RS14890;Dbxref=GenBank:WP_000884369.1;Name=WP_000884369.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459725.1;locus_tag=CCO40_RS14890;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000884369.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3078069 3078938 . - . ID=gene-CCO40_RS14895;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=CCO40_RS14895;old_locus_tag=CCO40_14895 NZ_CP075116.1 Protein Homology CDS 3078069 3078938 . - 0 ID=cds-WP_000114631.1;Parent=gene-CCO40_RS14895;Dbxref=GenBank:WP_000114631.1;Name=WP_000114631.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=CCO40_RS14895;product=succinate--CoA ligase subunit alpha;protein_id=WP_000114631.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3078938 3080104 . - . ID=gene-CCO40_RS14900;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=CCO40_RS14900;old_locus_tag=CCO40_14900 NZ_CP075116.1 Protein Homology CDS 3078938 3080104 . - 0 ID=cds-WP_001048590.1;Parent=gene-CCO40_RS14900;Dbxref=GenBank:WP_001048590.1;Name=WP_001048590.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=CCO40_RS14900;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_001048590.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3080246 3081454 . - . ID=gene-CCO40_RS14905;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=CCO40_RS14905;old_locus_tag=CCO40_14905 NZ_CP075116.1 Protein Homology CDS 3080246 3081454 . - 0 ID=cds-WP_000099858.1;Parent=gene-CCO40_RS14905;Dbxref=GenBank:WP_000099858.1;Name=WP_000099858.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459722.1;locus_tag=CCO40_RS14905;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_000099858.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3081469 3084270 . - . ID=gene-CCO40_RS14910;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=CCO40_RS14910;old_locus_tag=CCO40_14910 NZ_CP075116.1 Protein Homology CDS 3081469 3084270 . - 0 ID=cds-WP_001181500.1;Parent=gene-CCO40_RS14910;Dbxref=GenBank:WP_001181500.1;Name=WP_001181500.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459721.1;locus_tag=CCO40_RS14910;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181500.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3084794 3085510 . - . ID=gene-CCO40_RS14915;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=CCO40_RS14915;old_locus_tag=CCO40_14915 NZ_CP075116.1 Protein Homology CDS 3084794 3085510 . - 0 ID=cds-WP_001727709.1;Parent=gene-CCO40_RS14915;Dbxref=GenBank:WP_001727709.1;Name=WP_001727709.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=CCO40_RS14915;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001727709.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3085527 3087293 . - . ID=gene-CCO40_RS14920;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=CCO40_RS14920;old_locus_tag=CCO40_14920 NZ_CP075116.1 Protein Homology CDS 3085527 3087293 . - 0 ID=cds-WP_000775561.1;Parent=gene-CCO40_RS14920;Dbxref=GenBank:WP_000775561.1;Name=WP_000775561.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=CCO40_RS14920;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775561.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3087293 3087640 . - . ID=gene-CCO40_RS14925;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=CCO40_RS14925;old_locus_tag=CCO40_14925 NZ_CP075116.1 Protein Homology CDS 3087293 3087640 . - 0 ID=cds-WP_000254356.1;Parent=gene-CCO40_RS14925;Dbxref=GenBank:WP_000254356.1;Name=WP_000254356.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=CCO40_RS14925;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254356.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3087634 3088038 . - . ID=gene-CCO40_RS14930;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=CCO40_RS14930;old_locus_tag=CCO40_14930 NZ_CP075116.1 Protein Homology CDS 3087634 3088038 . - 0 ID=cds-WP_000263340.1;Parent=gene-CCO40_RS14930;Dbxref=GenBank:WP_000263340.1;Name=WP_000263340.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=CCO40_RS14930;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263340.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3088421 3088552 . + . ID=gene-CCO40_RS22795;Name=CCO40_RS22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22795 NZ_CP075116.1 Protein Homology CDS 3088421 3088552 . + 0 ID=cds-WP_418142699.1;Parent=gene-CCO40_RS22795;Dbxref=GenBank:WP_418142699.1;Name=WP_418142699.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049035.2;locus_tag=CCO40_RS22795;product=hypothetical protein;protein_id=WP_418142699.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3088778 3090061 . + . ID=gene-CCO40_RS14940;Name=CCO40_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14940;old_locus_tag=CCO40_14940 NZ_CP075116.1 Protein Homology CDS 3088778 3090061 . + 0 ID=cds-WP_000785811.1;Parent=gene-CCO40_RS14940;Dbxref=GenBank:WP_000785811.1;Name=WP_000785811.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459715.1;locus_tag=CCO40_RS14940;product=citrate synthase;protein_id=WP_000785811.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3090198 3091244 . + . ID=gene-CCO40_RS14945;Name=CCO40_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14945;old_locus_tag=CCO40_14945 NZ_CP075116.1 Protein Homology CDS 3090198 3091244 . + 0 ID=cds-WP_023250524.1;Parent=gene-CCO40_RS14945;Dbxref=GenBank:WP_023250524.1;Name=WP_023250524.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459714.1;locus_tag=CCO40_RS14945;product=AbrB family transcriptional regulator;protein_id=WP_023250524.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3091299 3092090 . - . ID=gene-CCO40_RS14950;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=CCO40_RS14950;old_locus_tag=CCO40_14950 NZ_CP075116.1 Protein Homology CDS 3091299 3092090 . - 0 ID=cds-WP_039589508.1;Parent=gene-CCO40_RS14950;Dbxref=GenBank:WP_039589508.1;Name=WP_039589508.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459713.1;locus_tag=CCO40_RS14950;product=endonuclease VIII;protein_id=WP_039589508.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3092139 3092276 . - . ID=gene-CCO40_RS14955;Name=CCO40_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14955;old_locus_tag=CCO40_14955 NZ_CP075116.1 Protein Homology CDS 3092139 3092276 . - 0 ID=cds-WP_001145917.1;Parent=gene-CCO40_RS14955;Dbxref=GenBank:WP_001145917.1;Name=WP_001145917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459712.1;locus_tag=CCO40_RS14955;product=hypothetical protein;protein_id=WP_001145917.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3092344 3094239 . - . ID=gene-CCO40_RS14960;Name=CCO40_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14960;old_locus_tag=CCO40_14960 NZ_CP075116.1 Protein Homology CDS 3092344 3094239 . - 0 ID=cds-WP_010988981.1;Parent=gene-CCO40_RS14960;Dbxref=GenBank:WP_010988981.1;Name=WP_010988981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459711.1;locus_tag=CCO40_RS14960;product=HAD family hydrolase;protein_id=WP_010988981.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3094297 3095130 . - . ID=gene-CCO40_RS14965;Name=CCO40_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14965;old_locus_tag=CCO40_14965 NZ_CP075116.1 Protein Homology CDS 3094297 3095130 . - 0 ID=cds-WP_001682278.1;Parent=gene-CCO40_RS14965;Dbxref=GenBank:WP_001682278.1;Name=WP_001682278.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459710.1;locus_tag=CCO40_RS14965;product=glycosyltransferase family A protein;protein_id=WP_001682278.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3095323 3097101 . - . ID=gene-CCO40_RS14970;Name=CCO40_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14970;old_locus_tag=CCO40_14970 NZ_CP075116.1 Protein Homology CDS 3095323 3097101 . - 0 ID=cds-WP_000273745.1;Parent=gene-CCO40_RS14970;Dbxref=GenBank:WP_000273745.1;Name=WP_000273745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459709.1;locus_tag=CCO40_RS14970;product=glycosyltransferase;protein_id=WP_000273745.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3097195 3097905 . - . ID=gene-CCO40_RS14975;Name=CCO40_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14975;old_locus_tag=CCO40_14975 NZ_CP075116.1 Protein Homology CDS 3097195 3097905 . - 0 ID=cds-WP_000702849.1;Parent=gene-CCO40_RS14975;Dbxref=GenBank:WP_000702849.1;Name=WP_000702849.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459708.1;locus_tag=CCO40_RS14975;product=ABC transporter ATP-binding protein;protein_id=WP_000702849.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3097909 3098679 . - . ID=gene-CCO40_RS14980;Name=CCO40_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14980;old_locus_tag=CCO40_14980 NZ_CP075116.1 Protein Homology CDS 3097909 3098679 . - 0 ID=cds-WP_000998823.1;Parent=gene-CCO40_RS14980;Dbxref=GenBank:WP_000998823.1;Name=WP_000998823.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459707.1;locus_tag=CCO40_RS14980;product=ABC transporter permease;protein_id=WP_000998823.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3098808 3099941 . - . ID=gene-CCO40_RS14985;Name=CCO40_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14985;old_locus_tag=CCO40_14985 NZ_CP075116.1 Protein Homology CDS 3098808 3099941 . - 0 ID=cds-WP_000824901.1;Parent=gene-CCO40_RS14985;Dbxref=GenBank:WP_000824901.1;Name=WP_000824901.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459706.1;locus_tag=CCO40_RS14985;product=glycosyltransferase family 4 protein;protein_id=WP_000824901.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3099954 3100850 . - . ID=gene-CCO40_RS14990;Name=CCO40_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS14990;old_locus_tag=CCO40_14990 NZ_CP075116.1 Protein Homology CDS 3099954 3100850 . - 0 ID=cds-WP_000973921.1;Parent=gene-CCO40_RS14990;Dbxref=GenBank:WP_000973921.1;Name=WP_000973921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459705.1;locus_tag=CCO40_RS14990;product=glycosyltransferase;protein_id=WP_000973921.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3100847 3101998 . - . ID=gene-CCO40_RS14995;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=CCO40_RS14995;old_locus_tag=CCO40_14995 NZ_CP075116.1 Protein Homology CDS 3100847 3101998 . - 0 ID=cds-WP_001682272.1;Parent=gene-CCO40_RS14995;Dbxref=GenBank:WP_001682272.1;Name=WP_001682272.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459704.1;locus_tag=CCO40_RS14995;product=UDP-galactopyranose mutase;protein_id=WP_001682272.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3102284 3103024 . - . ID=gene-CCO40_RS15000;Name=CCO40_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15000;old_locus_tag=CCO40_15000 NZ_CP075116.1 Protein Homology CDS 3102284 3103024 . - 0 ID=cds-WP_001194237.1;Parent=gene-CCO40_RS15000;Dbxref=GenBank:WP_001194237.1;Name=WP_001194237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459703.1;locus_tag=CCO40_RS15000;product=hypothetical protein;protein_id=WP_001194237.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3103026 3103350 . - . ID=gene-CCO40_RS15005;Name=CCO40_RS15005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS15005;old_locus_tag=CCO40_15005;pseudo=true NZ_CP075116.1 Protein Homology CDS 3103026 3103350 . - 0 ID=cds-CCO40_RS15005;Parent=gene-CCO40_RS15005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459702.1;locus_tag=CCO40_RS15005;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 3103810 3104376 . - . ID=gene-CCO40_RS15010;Name=CCO40_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15010;old_locus_tag=CCO40_15010 NZ_CP075116.1 Protein Homology CDS 3103810 3104376 . - 0 ID=cds-WP_000824704.1;Parent=gene-CCO40_RS15010;Dbxref=GenBank:WP_000824704.1;Name=WP_000824704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459701.1;locus_tag=CCO40_RS15010;product=tyrosine-type DNA invertase;protein_id=WP_000824704.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3104436 3104567 . - . ID=gene-CCO40_RS15015;Name=CCO40_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15015;old_locus_tag=CCO40_15015 NZ_CP075116.1 Protein Homology CDS 3104436 3104567 . - 0 ID=cds-WP_001531466.1;Parent=gene-CCO40_RS15015;Dbxref=GenBank:WP_001531466.1;Name=WP_001531466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459700.1;locus_tag=CCO40_RS15015;product=hypothetical protein;protein_id=WP_001531466.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3104891 3105625 . - . ID=gene-CCO40_RS15020;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=CCO40_RS15020;old_locus_tag=CCO40_15020 NZ_CP075116.1 Protein Homology CDS 3104891 3105625 . - 0 ID=cds-WP_001017914.1;Parent=gene-CCO40_RS15020;Dbxref=GenBank:WP_001017914.1;Name=WP_001017914.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459699.1;locus_tag=CCO40_RS15020;product=5-oxoprolinase subunit PxpA;protein_id=WP_001017914.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3105615 3106547 . - . ID=gene-CCO40_RS15025;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=CCO40_RS15025;old_locus_tag=CCO40_15025 NZ_CP075116.1 Protein Homology CDS 3105615 3106547 . - 0 ID=cds-WP_000932044.1;Parent=gene-CCO40_RS15025;Dbxref=GenBank:WP_000932044.1;Name=WP_000932044.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpC;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459698.1;locus_tag=CCO40_RS15025;product=5-oxoprolinase subunit PxpC;protein_id=WP_000932044.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3106541 3107197 . - . ID=gene-CCO40_RS15030;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=CCO40_RS15030;old_locus_tag=CCO40_15030 NZ_CP075116.1 Protein Homology CDS 3106541 3107197 . - 0 ID=cds-WP_001188371.1;Parent=gene-CCO40_RS15030;Dbxref=GenBank:WP_001188371.1;Name=WP_001188371.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=CCO40_RS15030;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188371.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3107213 3107956 . - . ID=gene-CCO40_RS15035;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=CCO40_RS15035;old_locus_tag=CCO40_15035 NZ_CP075116.1 Protein Homology CDS 3107213 3107956 . - 0 ID=cds-WP_000798844.1;Parent=gene-CCO40_RS15035;Dbxref=GenBank:WP_000798844.1;Name=WP_000798844.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=CCO40_RS15035;product=radiation resistance protein YbgI;protein_id=WP_000798844.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3108285 3109766 . + . ID=gene-CCO40_RS15040;Name=CCO40_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15040;old_locus_tag=CCO40_15040 NZ_CP075116.1 Protein Homology CDS 3108285 3109766 . + 0 ID=cds-WP_001041123.1;Parent=gene-CCO40_RS15040;Dbxref=GenBank:WP_001041123.1;Name=WP_001041123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459695.1;locus_tag=CCO40_RS15040;product=MFS transporter;protein_id=WP_001041123.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3109805 3111226 . - . ID=gene-CCO40_RS15045;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=CCO40_RS15045;old_locus_tag=CCO40_15045 NZ_CP075116.1 Protein Homology CDS 3109805 3111226 . - 0 ID=cds-WP_001142011.1;Parent=gene-CCO40_RS15045;Dbxref=GenBank:WP_001142011.1;Name=WP_001142011.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459694.1;locus_tag=CCO40_RS15045;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_001142011.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3111337 3111543 . - . ID=gene-CCO40_RS15050;Name=CCO40_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15050;old_locus_tag=CCO40_15050 NZ_CP075116.1 Protein Homology CDS 3111337 3111543 . - 0 ID=cds-WP_000401437.1;Parent=gene-CCO40_RS15050;Dbxref=GenBank:WP_000401437.1;Name=WP_000401437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459693.1;locus_tag=CCO40_RS15050;product=YbfA family protein;protein_id=WP_000401437.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3111880 3111969 . + . ID=gene-CCO40_RS15055;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=CCO40_RS15055;old_locus_tag=CCO40_15055 NZ_CP075116.1 Protein Homology CDS 3111880 3111969 . + 0 ID=cds-WP_001670793.1;Parent=gene-CCO40_RS15055;Dbxref=GenBank:WP_001670793.1;Name=WP_001670793.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=CCO40_RS15055;product=K(+)-transporting ATPase subunit F;protein_id=WP_001670793.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3111969 3113648 . + . ID=gene-CCO40_RS15060;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=CCO40_RS15060;old_locus_tag=CCO40_15060 NZ_CP075116.1 Protein Homology CDS 3111969 3113648 . + 0 ID=cds-WP_000730078.1;Parent=gene-CCO40_RS15060;Dbxref=GenBank:WP_000730078.1;Name=WP_000730078.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459691.1;locus_tag=CCO40_RS15060;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_000730078.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3113669 3115717 . + . ID=gene-CCO40_RS15065;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=CCO40_RS15065;old_locus_tag=CCO40_15065 NZ_CP075116.1 Protein Homology CDS 3113669 3115717 . + 0 ID=cds-WP_079788569.1;Parent=gene-CCO40_RS15065;Dbxref=GenBank:WP_079788569.1;Name=WP_079788569.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459690.1;locus_tag=CCO40_RS15065;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_079788569.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3115726 3116310 . + . ID=gene-CCO40_RS15070;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=CCO40_RS15070;old_locus_tag=CCO40_15070 NZ_CP075116.1 Protein Homology CDS 3115726 3116310 . + 0 ID=cds-WP_001531408.1;Parent=gene-CCO40_RS15070;Dbxref=GenBank:WP_001531408.1;Name=WP_001531408.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=CCO40_RS15070;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_001531408.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3116307 3118991 . + . ID=gene-CCO40_RS15075;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=CCO40_RS15075;old_locus_tag=CCO40_15075 NZ_CP075116.1 Protein Homology CDS 3116307 3118991 . + 0 ID=cds-WP_000997468.1;Parent=gene-CCO40_RS15075;Dbxref=GenBank:WP_000997468.1;Name=WP_000997468.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459688.1;locus_tag=CCO40_RS15075;product=two-component system sensor histidine kinase KdpD;protein_id=WP_000997468.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3118988 3119665 . + . ID=gene-CCO40_RS15080;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=CCO40_RS15080;old_locus_tag=CCO40_15080 NZ_CP075116.1 Protein Homology CDS 3118988 3119665 . + 0 ID=cds-WP_000186054.1;Parent=gene-CCO40_RS15080;Dbxref=GenBank:WP_000186054.1;Name=WP_000186054.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=CCO40_RS15080;product=two-component system response regulator KdpE;protein_id=WP_000186054.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3119943 3120047 . + . ID=gene-CCO40_RS15085;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=CCO40_RS15085;old_locus_tag=CCO40_15085 NZ_CP075116.1 Protein Homology CDS 3119943 3120047 . + 0 ID=cds-WP_015632840.1;Parent=gene-CCO40_RS15085;Dbxref=GenBank:WP_015632840.1;Name=WP_015632840.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=CCO40_RS15085;product=leader peptide SpeFL;protein_id=WP_015632840.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3120427 3122625 . + . ID=gene-CCO40_RS15090;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=CCO40_RS15090;old_locus_tag=CCO40_15090 NZ_CP075116.1 Protein Homology CDS 3120427 3122625 . + 0 ID=cds-WP_001292402.1;Parent=gene-CCO40_RS15090;Dbxref=GenBank:WP_001292402.1;Name=WP_001292402.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=CCO40_RS15090;product=ornithine decarboxylase SpeF;protein_id=WP_001292402.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3122622 3123941 . + . ID=gene-CCO40_RS15095;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=CCO40_RS15095;old_locus_tag=CCO40_15095 NZ_CP075116.1 Protein Homology CDS 3122622 3123941 . + 0 ID=cds-WP_000042658.1;Parent=gene-CCO40_RS15095;Dbxref=GenBank:WP_000042658.1;Name=WP_000042658.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=CCO40_RS15095;product=putrescine-ornithine antiporter;protein_id=WP_000042658.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3124006 3124491 . + . ID=gene-CCO40_RS15100;Name=CCO40_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15100;old_locus_tag=CCO40_15100 NZ_CP075116.1 Protein Homology CDS 3124006 3124491 . + 0 ID=cds-WP_000070061.1;Parent=gene-CCO40_RS15100;Dbxref=GenBank:WP_000070061.1;Name=WP_000070061.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459684.1;locus_tag=CCO40_RS15100;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_000070061.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3124606 3126246 . - . ID=gene-CCO40_RS15105;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=CCO40_RS15105;old_locus_tag=CCO40_15105 NZ_CP075116.1 Protein Homology CDS 3124606 3126246 . - 0 ID=cds-WP_000974385.1;Parent=gene-CCO40_RS15105;Dbxref=GenBank:WP_000974385.1;Name=WP_000974385.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459683.1;locus_tag=CCO40_RS15105;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_000974385.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3126271 3126813 . - . ID=gene-CCO40_RS15110;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=CCO40_RS15110;old_locus_tag=CCO40_15110 NZ_CP075116.1 Protein Homology CDS 3126271 3126813 . - 0 ID=cds-WP_000848395.1;Parent=gene-CCO40_RS15110;Dbxref=GenBank:WP_000848395.1;Name=WP_000848395.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459682.1;locus_tag=CCO40_RS15110;product=replication initiation negative regulator SeqA;protein_id=WP_000848395.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3126998 3127768 . + . ID=gene-CCO40_RS15115;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=CCO40_RS15115;old_locus_tag=CCO40_15115 NZ_CP075116.1 Protein Homology CDS 3126998 3127768 . + 0 ID=cds-WP_000773247.1;Parent=gene-CCO40_RS15115;Dbxref=GenBank:WP_000773247.1;Name=WP_000773247.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459681.1;locus_tag=CCO40_RS15115;product=esterase;protein_id=WP_000773247.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3127902 3128195 . + . ID=gene-CCO40_RS15120;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=CCO40_RS15120;old_locus_tag=CCO40_15120 NZ_CP075116.1 Protein Homology CDS 3127902 3128195 . + 0 ID=cds-WP_001040939.1;Parent=gene-CCO40_RS15120;Dbxref=GenBank:WP_001040939.1;Name=WP_001040939.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459680.1;locus_tag=CCO40_RS15120;product=LexA regulated protein;protein_id=WP_001040939.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3128346 3128876 . + . ID=gene-CCO40_RS15125;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=CCO40_RS15125;old_locus_tag=CCO40_15125 NZ_CP075116.1 Protein Homology CDS 3128346 3128876 . + 0 ID=cds-WP_001018621.1;Parent=gene-CCO40_RS15125;Dbxref=GenBank:WP_001018621.1;Name=WP_001018621.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=CCO40_RS15125;product=flavodoxin FldA;protein_id=WP_001018621.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3129080 3129165 . + . ID=gene-CCO40_RS15130;Name=CCO40_RS15130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS15130;old_locus_tag=CCO40_15130;pseudo=true NZ_CP075116.1 Protein Homology CDS 3129080 3129165 . + 0 ID=cds-CCO40_RS15130;Parent=gene-CCO40_RS15130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=CCO40_RS15130;product=fur leader peptide;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 3129158 3129610 . + . ID=gene-CCO40_RS15135;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=CCO40_RS15135;old_locus_tag=CCO40_15135 NZ_CP075116.1 Protein Homology CDS 3129158 3129610 . + 0 ID=cds-WP_000131699.1;Parent=gene-CCO40_RS15135;Dbxref=GenBank:WP_000131699.1;Name=WP_000131699.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459678.1;locus_tag=CCO40_RS15135;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131699.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3129725 3130651 . + . ID=gene-CCO40_RS15140;Name=tcuR;gbkey=Gene;gene=tcuR;gene_biotype=protein_coding;locus_tag=CCO40_RS15140;old_locus_tag=CCO40_15140 NZ_CP075116.1 Protein Homology CDS 3129725 3130651 . + 0 ID=cds-WP_000423371.1;Parent=gene-CCO40_RS15140;Dbxref=GenBank:WP_000423371.1;Name=WP_000423371.1;gbkey=CDS;gene=tcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459677.1;locus_tag=CCO40_RS15140;product=tricarballylate utilization LysR family transcriptional regulator TcuR;protein_id=WP_000423371.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3130749 3132152 . + . ID=gene-CCO40_RS15145;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=CCO40_RS15145;old_locus_tag=CCO40_15145 NZ_CP075116.1 Protein Homology CDS 3130749 3132152 . + 0 ID=cds-WP_000228705.1;Parent=gene-CCO40_RS15145;Dbxref=GenBank:WP_000228705.1;Name=WP_000228705.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459676.1;locus_tag=CCO40_RS15145;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=WP_000228705.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3132139 3133278 . + . ID=gene-CCO40_RS15150;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=CCO40_RS15150;old_locus_tag=CCO40_15150 NZ_CP075116.1 Protein Homology CDS 3132139 3133278 . + 0 ID=cds-WP_000811151.1;Parent=gene-CCO40_RS15150;Dbxref=GenBank:WP_000811151.1;Name=WP_000811151.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459675.1;locus_tag=CCO40_RS15150;product=tricarballylate utilization protein TcuB;protein_id=WP_000811151.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3133329 3134633 . + . ID=gene-CCO40_RS15155;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=CCO40_RS15155;old_locus_tag=CCO40_15155 NZ_CP075116.1 Protein Homology CDS 3133329 3134633 . + 0 ID=cds-WP_000057014.1;Parent=gene-CCO40_RS15155;Dbxref=GenBank:WP_000057014.1;Name=WP_000057014.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459674.1;locus_tag=CCO40_RS15155;product=tricarballylate/proton symporter TcuC;protein_id=WP_000057014.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3134682 3135014 . - . ID=gene-CCO40_RS15160;Name=CCO40_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15160;old_locus_tag=CCO40_15160 NZ_CP075116.1 Protein Homology CDS 3134682 3135014 . - 0 ID=cds-WP_000722260.1;Parent=gene-CCO40_RS15160;Dbxref=GenBank:WP_000722260.1;Name=WP_000722260.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459673.1;locus_tag=CCO40_RS15160;product=ChiQ/YbfN family lipoprotein;protein_id=WP_000722260.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3135064 3136470 . - . ID=gene-CCO40_RS15165;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=CCO40_RS15165;old_locus_tag=CCO40_15165 NZ_CP075116.1 Protein Homology CDS 3135064 3136470 . - 0 ID=cds-WP_001258803.1;Parent=gene-CCO40_RS15165;Dbxref=GenBank:WP_001258803.1;Name=WP_001258803.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459672.1;locus_tag=CCO40_RS15165;product=chitoporin ChiP;protein_id=WP_001258803.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3136922 3138589 . - . ID=gene-CCO40_RS15170;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=CCO40_RS15170;old_locus_tag=CCO40_15170 NZ_CP075116.1 Protein Homology CDS 3136922 3138589 . - 0 ID=cds-WP_001287181.1;Parent=gene-CCO40_RS15170;Dbxref=GenBank:WP_001287181.1;Name=WP_001287181.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=CCO40_RS15170;product=glutamine--tRNA ligase;protein_id=WP_001287181.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3138800 3140752 . - . ID=gene-CCO40_RS15175;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=CCO40_RS15175;old_locus_tag=CCO40_15175 NZ_CP075116.1 Protein Homology CDS 3138800 3140752 . - 0 ID=cds-WP_001023068.1;Parent=gene-CCO40_RS15175;Dbxref=GenBank:WP_001023068.1;Name=WP_001023068.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459670.1;locus_tag=CCO40_RS15175;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_001023068.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3141079 3141879 . + . ID=gene-CCO40_RS15180;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=CCO40_RS15180;old_locus_tag=CCO40_15180 NZ_CP075116.1 Protein Homology CDS 3141079 3141879 . + 0 ID=cds-WP_001237059.1;Parent=gene-CCO40_RS15180;Dbxref=GenBank:WP_001237059.1;Name=WP_001237059.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=CCO40_RS15180;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237059.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3141939 3143093 . + . ID=gene-CCO40_RS15185;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=CCO40_RS15185;old_locus_tag=CCO40_15185 NZ_CP075116.1 Protein Homology CDS 3141939 3143093 . + 0 ID=cds-WP_000271184.1;Parent=gene-CCO40_RS15185;Dbxref=GenBank:WP_000271184.1;Name=WP_000271184.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459668.1;locus_tag=CCO40_RS15185;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_000271184.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3143098 3144318 . + . ID=gene-CCO40_RS15190;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=CCO40_RS15190;old_locus_tag=CCO40_15190 NZ_CP075116.1 Protein Homology CDS 3143098 3144318 . + 0 ID=cds-WP_000187578.1;Parent=gene-CCO40_RS15190;Dbxref=GenBank:WP_000187578.1;Name=WP_000187578.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459667.1;locus_tag=CCO40_RS15190;product=DNA-binding transcriptional regulator NagC;protein_id=WP_000187578.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3144365 3145117 . + . ID=gene-CCO40_RS15195;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=CCO40_RS15195;old_locus_tag=CCO40_15195 NZ_CP075116.1 Protein Homology CDS 3144365 3145117 . + 0 ID=cds-WP_000153143.1;Parent=gene-CCO40_RS15195;Dbxref=GenBank:WP_000153143.1;Name=WP_000153143.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373873.1;locus_tag=CCO40_RS15195;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153143.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3145407 3147071 . + . ID=gene-CCO40_RS15200;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=CCO40_RS15200;old_locus_tag=CCO40_15200 NZ_CP075116.1 Protein Homology CDS 3145407 3147071 . + 0 ID=cds-WP_000337028.1;Parent=gene-CCO40_RS15200;Dbxref=GenBank:WP_000337028.1;Name=WP_000337028.1;Ontology_term=GO:0070981,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=L-asparagine biosynthetic process|0070981||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=CCO40_RS15200;product=asparagine synthase B;protein_id=WP_000337028.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3147293 3147369 . + . ID=gene-CCO40_RS15205;Name=CCO40_RS15205;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS15205;old_locus_tag=CCO40_15205 NZ_CP075116.1 tRNAscan-SE tRNA 3147293 3147369 . + . ID=rna-CCO40_RS15205;Parent=gene-CCO40_RS15205;anticodon=(pos:3147327..3147329);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS15205;product=tRNA-Met NZ_CP075116.1 tRNAscan-SE exon 3147293 3147369 . + . ID=exon-CCO40_RS15205-1;Parent=rna-CCO40_RS15205;anticodon=(pos:3147327..3147329);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS15205;product=tRNA-Met NZ_CP075116.1 RefSeq gene 3147378 3147462 . + . ID=gene-CCO40_RS15210;Name=CCO40_RS15210;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS15210;old_locus_tag=CCO40_15210 NZ_CP075116.1 tRNAscan-SE tRNA 3147378 3147462 . + . ID=rna-CCO40_RS15210;Parent=gene-CCO40_RS15210;anticodon=(pos:3147412..3147414);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS15210;product=tRNA-Leu NZ_CP075116.1 tRNAscan-SE exon 3147378 3147462 . + . ID=exon-CCO40_RS15210-1;Parent=rna-CCO40_RS15210;anticodon=(pos:3147412..3147414);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS15210;product=tRNA-Leu NZ_CP075116.1 RefSeq gene 3147486 3147560 . + . ID=gene-CCO40_RS15215;Name=CCO40_RS15215;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS15215;old_locus_tag=CCO40_15215 NZ_CP075116.1 tRNAscan-SE tRNA 3147486 3147560 . + . ID=rna-CCO40_RS15215;Parent=gene-CCO40_RS15215;anticodon=(pos:3147518..3147520);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS15215;product=tRNA-Gln NZ_CP075116.1 tRNAscan-SE exon 3147486 3147560 . + . ID=exon-CCO40_RS15215-1;Parent=rna-CCO40_RS15215;anticodon=(pos:3147518..3147520);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS15215;product=tRNA-Gln NZ_CP075116.1 RefSeq gene 3147596 3147670 . + . ID=gene-CCO40_RS15220;Name=CCO40_RS15220;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS15220;old_locus_tag=CCO40_15220 NZ_CP075116.1 tRNAscan-SE tRNA 3147596 3147670 . + . ID=rna-CCO40_RS15220;Parent=gene-CCO40_RS15220;anticodon=(pos:3147628..3147630);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS15220;product=tRNA-Gln NZ_CP075116.1 tRNAscan-SE exon 3147596 3147670 . + . ID=exon-CCO40_RS15220-1;Parent=rna-CCO40_RS15220;anticodon=(pos:3147628..3147630);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS15220;product=tRNA-Gln NZ_CP075116.1 RefSeq gene 3147686 3147762 . + . ID=gene-CCO40_RS15225;Name=CCO40_RS15225;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS15225;old_locus_tag=CCO40_15225 NZ_CP075116.1 tRNAscan-SE tRNA 3147686 3147762 . + . ID=rna-CCO40_RS15225;Parent=gene-CCO40_RS15225;anticodon=(pos:3147720..3147722);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS15225;product=tRNA-Met NZ_CP075116.1 tRNAscan-SE exon 3147686 3147762 . + . ID=exon-CCO40_RS15225-1;Parent=rna-CCO40_RS15225;anticodon=(pos:3147720..3147722);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS15225;product=tRNA-Met NZ_CP075116.1 RefSeq gene 3147809 3147883 . + . ID=gene-CCO40_RS15230;Name=CCO40_RS15230;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS15230;old_locus_tag=CCO40_15230 NZ_CP075116.1 tRNAscan-SE tRNA 3147809 3147883 . + . ID=rna-CCO40_RS15230;Parent=gene-CCO40_RS15230;anticodon=(pos:3147841..3147843);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS15230;product=tRNA-Gln NZ_CP075116.1 tRNAscan-SE exon 3147809 3147883 . + . ID=exon-CCO40_RS15230-1;Parent=rna-CCO40_RS15230;anticodon=(pos:3147841..3147843);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS15230;product=tRNA-Gln NZ_CP075116.1 RefSeq gene 3147927 3148001 . + . ID=gene-CCO40_RS15235;Name=CCO40_RS15235;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS15235;old_locus_tag=CCO40_15235 NZ_CP075116.1 tRNAscan-SE tRNA 3147927 3148001 . + . ID=rna-CCO40_RS15235;Parent=gene-CCO40_RS15235;anticodon=(pos:3147959..3147961);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS15235;product=tRNA-Gln NZ_CP075116.1 tRNAscan-SE exon 3147927 3148001 . + . ID=exon-CCO40_RS15235-1;Parent=rna-CCO40_RS15235;anticodon=(pos:3147959..3147961);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS15235;product=tRNA-Gln NZ_CP075116.1 RefSeq gene 3148137 3148712 . + . ID=gene-CCO40_RS15240;Name=CCO40_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15240;old_locus_tag=CCO40_15240 NZ_CP075116.1 Protein Homology CDS 3148137 3148712 . + 0 ID=cds-WP_001109072.1;Parent=gene-CCO40_RS15240;Dbxref=GenBank:WP_001109072.1;Name=WP_001109072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459664.1;locus_tag=CCO40_RS15240;product=membrane protein;protein_id=WP_001109072.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3148779 3149954 . - . ID=gene-CCO40_RS15245;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=CCO40_RS15245;old_locus_tag=CCO40_15245 NZ_CP075116.1 Protein Homology CDS 3148779 3149954 . - 0 ID=cds-WP_000184641.1;Parent=gene-CCO40_RS15245;Dbxref=GenBank:WP_000184641.1;Name=WP_000184641.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=CCO40_RS15245;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_000184641.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3150098 3151522 . + . ID=gene-CCO40_RS15250;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=CCO40_RS15250;old_locus_tag=CCO40_15250 NZ_CP075116.1 Protein Homology CDS 3150098 3151522 . + 0 ID=cds-WP_001519200.1;Parent=gene-CCO40_RS15250;Dbxref=GenBank:WP_001519200.1;Name=WP_001519200.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=CCO40_RS15250;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_001519200.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3151727 3152773 . + . ID=gene-CCO40_RS15255;Name=CCO40_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15255;old_locus_tag=CCO40_15255 NZ_CP075116.1 Protein Homology CDS 3151727 3152773 . + 0 ID=cds-WP_001018045.1;Parent=gene-CCO40_RS15255;Dbxref=GenBank:WP_001018045.1;Name=WP_001018045.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=CCO40_RS15255;product=PhoH family protein;protein_id=WP_001018045.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3152770 3153243 . + . ID=gene-CCO40_RS15260;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=CCO40_RS15260;old_locus_tag=CCO40_15260 NZ_CP075116.1 Protein Homology CDS 3152770 3153243 . + 0 ID=cds-WP_000084477.1;Parent=gene-CCO40_RS15260;Dbxref=GenBank:WP_000084477.1;Name=WP_000084477.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459660.1;locus_tag=CCO40_RS15260;product=rRNA maturation RNase YbeY;protein_id=WP_000084477.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3153401 3154279 . + . ID=gene-CCO40_RS15265;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=CCO40_RS15265;old_locus_tag=CCO40_15265 NZ_CP075116.1 Protein Homology CDS 3153401 3154279 . + 0 ID=cds-WP_001278615.1;Parent=gene-CCO40_RS15265;Dbxref=GenBank:WP_001278615.1;Name=WP_001278615.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459659.1;locus_tag=CCO40_RS15265;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278615.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3154299 3155837 . + . ID=gene-CCO40_RS15270;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=CCO40_RS15270;old_locus_tag=CCO40_15270 NZ_CP075116.1 Protein Homology CDS 3154299 3155837 . + 0 ID=cds-WP_001575804.1;Parent=gene-CCO40_RS15270;Dbxref=GenBank:WP_001575804.1;Name=WP_001575804.1;Ontology_term=GO:0042158,GO:0016747,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=CCO40_RS15270;product=apolipoprotein N-acyltransferase;protein_id=WP_001575804.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3156192 3157100 . + . ID=gene-CCO40_RS15275;Name=CCO40_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15275;old_locus_tag=CCO40_15275 NZ_CP075116.1 Protein Homology CDS 3156192 3157100 . + 0 ID=cds-WP_001531395.1;Parent=gene-CCO40_RS15275;Dbxref=GenBank:WP_001531395.1;Name=WP_001531395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=CCO40_RS15275;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_001531395.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3157260 3158000 . + . ID=gene-CCO40_RS15280;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=CCO40_RS15280;old_locus_tag=CCO40_15280 NZ_CP075116.1 Protein Homology CDS 3157260 3158000 . + 0 ID=cds-WP_000020930.1;Parent=gene-CCO40_RS15280;Dbxref=GenBank:WP_000020930.1;Name=WP_000020930.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459656.1;locus_tag=CCO40_RS15280;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_000020930.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3158000 3158674 . + . ID=gene-CCO40_RS15285;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=CCO40_RS15285;old_locus_tag=CCO40_15285 NZ_CP075116.1 Protein Homology CDS 3158000 3158674 . + 0 ID=cds-WP_000272794.1;Parent=gene-CCO40_RS15285;Dbxref=GenBank:WP_000272794.1;Name=WP_000272794.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=CCO40_RS15285;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272794.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3158674 3159399 . + . ID=gene-CCO40_RS15290;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=CCO40_RS15290;old_locus_tag=CCO40_15290 NZ_CP075116.1 Protein Homology CDS 3158674 3159399 . + 0 ID=cds-WP_000631369.1;Parent=gene-CCO40_RS15290;Dbxref=GenBank:WP_000631369.1;Name=WP_000631369.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=CCO40_RS15290;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WP_000631369.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3159516 3160451 . + . ID=gene-CCO40_RS15295;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=CCO40_RS15295;old_locus_tag=CCO40_15295 NZ_CP075116.1 Protein Homology CDS 3159516 3160451 . + 0 ID=cds-WP_001207422.1;Parent=gene-CCO40_RS15295;Dbxref=GenBank:WP_001207422.1;Name=WP_001207422.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459653.1;locus_tag=CCO40_RS15295;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_001207422.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3160483 3161721 . + . ID=gene-CCO40_RS15300;Name=CCO40_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15300;old_locus_tag=CCO40_15300 NZ_CP075116.1 Protein Homology CDS 3160483 3161721 . + 0 ID=cds-WP_000498894.1;Parent=gene-CCO40_RS15300;Dbxref=GenBank:WP_000498894.1;Name=WP_000498894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459652.1;locus_tag=CCO40_RS15300;product=hypothetical protein;protein_id=WP_000498894.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3161797 3163476 . + . ID=gene-CCO40_RS15305;Name=hscC;gbkey=Gene;gene=hscC;gene_biotype=protein_coding;locus_tag=CCO40_RS15305;old_locus_tag=CCO40_15305 NZ_CP075116.1 Protein Homology CDS 3161797 3163476 . + 0 ID=cds-WP_000368025.1;Parent=gene-CCO40_RS15305;Dbxref=GenBank:WP_000368025.1;Name=WP_000368025.1;gbkey=CDS;gene=hscC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459651.1;locus_tag=CCO40_RS15305;product=molecular chaperone HscC;protein_id=WP_000368025.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3163498 3164970 . - . ID=gene-CCO40_RS15310;Name=CCO40_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15310;old_locus_tag=CCO40_15310 NZ_CP075116.1 Protein Homology CDS 3163498 3164970 . - 0 ID=cds-WP_001017755.1;Parent=gene-CCO40_RS15310;Dbxref=GenBank:WP_001017755.1;Name=WP_001017755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459650.1;locus_tag=CCO40_RS15310;product=J domain-containing protein;protein_id=WP_001017755.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3164967 3165662 . - . ID=gene-CCO40_RS15315;Name=CCO40_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15315;old_locus_tag=CCO40_15315 NZ_CP075116.1 Protein Homology CDS 3164967 3165662 . - 0 ID=cds-WP_000356624.1;Parent=gene-CCO40_RS15315;Dbxref=GenBank:WP_000356624.1;Name=WP_000356624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459649.1;locus_tag=CCO40_RS15315;product=DUF1266 domain-containing protein;protein_id=WP_000356624.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3165674 3167107 . - . ID=gene-CCO40_RS15320;Name=CCO40_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15320;old_locus_tag=CCO40_15320 NZ_CP075116.1 Protein Homology CDS 3165674 3167107 . - 0 ID=cds-WP_094889119.1;Parent=gene-CCO40_RS15320;Dbxref=GenBank:WP_094889119.1;Name=WP_094889119.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459648.1;locus_tag=CCO40_RS15320;product=J domain-containing protein;protein_id=WP_094889119.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3167104 3167811 . - . ID=gene-CCO40_RS15325;Name=CCO40_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15325;old_locus_tag=CCO40_15325 NZ_CP075116.1 Protein Homology CDS 3167104 3167811 . - 0 ID=cds-WP_058107629.1;Parent=gene-CCO40_RS15325;Dbxref=GenBank:WP_058107629.1;Name=WP_058107629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459647.1;locus_tag=CCO40_RS15325;product=DUF1266 domain-containing protein;protein_id=WP_058107629.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3167936 3168931 . + . ID=gene-CCO40_RS15330;Name=CCO40_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15330;old_locus_tag=CCO40_15330 NZ_CP075116.1 Protein Homology CDS 3167936 3168931 . + 0 ID=cds-WP_094889120.1;Parent=gene-CCO40_RS15330;Dbxref=GenBank:WP_094889120.1;Name=WP_094889120.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459646.1;locus_tag=CCO40_RS15330;product=tetratricopeptide repeat protein;protein_id=WP_094889120.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3168970 3169443 . - . ID=gene-CCO40_RS15335;Name=CCO40_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15335;old_locus_tag=CCO40_15335 NZ_CP075116.1 Protein Homology CDS 3168970 3169443 . - 0 ID=cds-WP_001044884.1;Parent=gene-CCO40_RS15335;Dbxref=GenBank:WP_001044884.1;Name=WP_001044884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=CCO40_RS15335;product=zinc ribbon-containing protein;protein_id=WP_001044884.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3169536 3171464 . - . ID=gene-CCO40_RS15340;Name=CCO40_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15340;old_locus_tag=CCO40_15340 NZ_CP075116.1 Protein Homology CDS 3169536 3171464 . - 0 ID=cds-WP_001044172.1;Parent=gene-CCO40_RS15340;Dbxref=GenBank:WP_001044172.1;Name=WP_001044172.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=CCO40_RS15340;product=sigma-54 interaction domain-containing protein;protein_id=WP_001044172.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3171532 3172485 . - . ID=gene-CCO40_RS15345;Name=CCO40_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15345;old_locus_tag=CCO40_15345 NZ_CP075116.1 Protein Homology CDS 3171532 3172485 . - 0 ID=cds-WP_000694482.1;Parent=gene-CCO40_RS15345;Dbxref=GenBank:WP_000694482.1;Name=WP_000694482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459643.1;locus_tag=CCO40_RS15345;product=2-keto-3-deoxygluconate permease;protein_id=WP_000694482.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3172535 3173707 . - . ID=gene-CCO40_RS15350;Name=CCO40_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15350;old_locus_tag=CCO40_15350 NZ_CP075116.1 Protein Homology CDS 3172535 3173707 . - 0 ID=cds-WP_001670689.1;Parent=gene-CCO40_RS15350;Dbxref=GenBank:WP_001670689.1;Name=WP_001670689.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=CCO40_RS15350;product=UxaA family hydrolase;protein_id=WP_001670689.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3173724 3174065 . - . ID=gene-CCO40_RS15355;Name=CCO40_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15355;old_locus_tag=CCO40_15355 NZ_CP075116.1 Protein Homology CDS 3173724 3174065 . - 0 ID=cds-WP_015632837.1;Parent=gene-CCO40_RS15355;Dbxref=GenBank:WP_015632837.1;Name=WP_015632837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=CCO40_RS15355;product=UxaA family hydrolase;protein_id=WP_015632837.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3174302 3176884 . + . ID=gene-CCO40_RS15360;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=CCO40_RS15360;old_locus_tag=CCO40_15360 NZ_CP075116.1 Protein Homology CDS 3174302 3176884 . + 0 ID=cds-WP_001157916.1;Parent=gene-CCO40_RS15360;Dbxref=GenBank:WP_001157916.1;Name=WP_001157916.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=CCO40_RS15360;product=leucine--tRNA ligase;protein_id=WP_001157916.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3176899 3177489 . + . ID=gene-CCO40_RS15365;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=CCO40_RS15365;old_locus_tag=CCO40_15365 NZ_CP075116.1 Protein Homology CDS 3176899 3177489 . + 0 ID=cds-WP_001269950.1;Parent=gene-CCO40_RS15365;Dbxref=GenBank:WP_001269950.1;Name=WP_001269950.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459639.1;locus_tag=CCO40_RS15365;product=LPS assembly lipoprotein LptE;protein_id=WP_001269950.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3177489 3178520 . + . ID=gene-CCO40_RS15370;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=CCO40_RS15370;old_locus_tag=CCO40_15370 NZ_CP075116.1 Protein Homology CDS 3177489 3178520 . + 0 ID=cds-WP_000620491.1;Parent=gene-CCO40_RS15370;Dbxref=GenBank:WP_000620491.1;Name=WP_000620491.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459638.1;locus_tag=CCO40_RS15370;product=DNA polymerase III subunit delta;protein_id=WP_000620491.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3178522 3179163 . + . ID=gene-CCO40_RS15375;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=CCO40_RS15375;old_locus_tag=CCO40_15375 NZ_CP075116.1 Protein Homology CDS 3178522 3179163 . + 0 ID=cds-WP_001537351.1;Parent=gene-CCO40_RS15375;Dbxref=GenBank:WP_001537351.1;Name=WP_001537351.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459637.1;locus_tag=CCO40_RS15375;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_001537351.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3179138 3180232 . - . ID=gene-CCO40_RS15380;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=CCO40_RS15380;old_locus_tag=CCO40_15380 NZ_CP075116.1 Protein Homology CDS 3179138 3180232 . - 0 ID=cds-WP_001173258.1;Parent=gene-CCO40_RS15380;Dbxref=GenBank:WP_001173258.1;Name=WP_001173258.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;gene=cobD;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459636.1;locus_tag=CCO40_RS15380;product=threonine-phosphate decarboxylase CobD;protein_id=WP_001173258.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3180329 3180937 . + . ID=gene-CCO40_RS15385;Name=CCO40_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15385;old_locus_tag=CCO40_15385 NZ_CP075116.1 Protein Homology CDS 3180329 3180937 . + 0 ID=cds-WP_001241917.1;Parent=gene-CCO40_RS15385;Dbxref=GenBank:WP_001241917.1;Name=WP_001241917.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459635.1;locus_tag=CCO40_RS15385;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_001241917.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3181266 3181583 . + . ID=gene-CCO40_RS15390;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=CCO40_RS15390;old_locus_tag=CCO40_15390 NZ_CP075116.1 Protein Homology CDS 3181266 3181583 . + 0 ID=cds-WP_001161670.1;Parent=gene-CCO40_RS15390;Dbxref=GenBank:WP_001161670.1;Name=WP_001161670.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=CCO40_RS15390;product=ribosome silencing factor;protein_id=WP_001161670.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3181587 3182054 . + . ID=gene-CCO40_RS15395;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=CCO40_RS15395;old_locus_tag=CCO40_15395 NZ_CP075116.1 Protein Homology CDS 3181587 3182054 . + 0 ID=cds-WP_000776107.1;Parent=gene-CCO40_RS15395;Dbxref=GenBank:WP_000776107.1;Name=WP_000776107.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=CCO40_RS15395;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000776107.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3182085 3183986 . + . ID=gene-CCO40_RS15400;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=CCO40_RS15400;old_locus_tag=CCO40_15400 NZ_CP075116.1 Protein Homology CDS 3182085 3183986 . + 0 ID=cds-WP_000828700.1;Parent=gene-CCO40_RS15400;Dbxref=GenBank:WP_000828700.1;Name=WP_000828700.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=CCO40_RS15400;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_000828700.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3183989 3185101 . + . ID=gene-CCO40_RS15405;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=CCO40_RS15405;old_locus_tag=CCO40_15405 NZ_CP075116.1 Protein Homology CDS 3183989 3185101 . + 0 ID=cds-WP_000131713.1;Parent=gene-CCO40_RS15405;Dbxref=GenBank:WP_000131713.1;Name=WP_000131713.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=CCO40_RS15405;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_000131713.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3185112 3186245 . + . ID=gene-CCO40_RS15410;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=CCO40_RS15410;old_locus_tag=CCO40_15410 NZ_CP075116.1 Protein Homology CDS 3185112 3186245 . + 0 ID=cds-WP_001231305.1;Parent=gene-CCO40_RS15410;Dbxref=GenBank:WP_001231305.1;Name=WP_001231305.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=CCO40_RS15410;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_001231305.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3186385 3187596 . + . ID=gene-CCO40_RS15415;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=CCO40_RS15415;old_locus_tag=CCO40_15415 NZ_CP075116.1 Protein Homology CDS 3186385 3187596 . + 0 ID=cds-WP_000858711.1;Parent=gene-CCO40_RS15415;Dbxref=GenBank:WP_000858711.1;Name=WP_000858711.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=CCO40_RS15415;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_000858711.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3187704 3187967 . + . ID=gene-CCO40_RS15420;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=CCO40_RS15420;old_locus_tag=CCO40_15420 NZ_CP075116.1 Protein Homology CDS 3187704 3187967 . + 0 ID=cds-WP_000850547.1;Parent=gene-CCO40_RS15420;Dbxref=GenBank:WP_000850547.1;Name=WP_000850547.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=CCO40_RS15420;product=DUF493 family protein YbeD;protein_id=WP_000850547.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3188067 3188708 . + . ID=gene-CCO40_RS15425;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=CCO40_RS15425;old_locus_tag=CCO40_15425 NZ_CP075116.1 Protein Homology CDS 3188067 3188708 . + 0 ID=cds-WP_000284009.1;Parent=gene-CCO40_RS15425;Dbxref=GenBank:WP_000284009.1;Name=WP_000284009.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=CCO40_RS15425;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_000284009.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3189010 3189963 . + . ID=gene-CCO40_RS15430;Name=CCO40_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15430;old_locus_tag=CCO40_15430 NZ_CP075116.1 Protein Homology CDS 3189010 3189963 . + 0 ID=cds-WP_001282817.1;Parent=gene-CCO40_RS15430;Dbxref=GenBank:WP_001282817.1;Name=WP_001282817.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459626.1;locus_tag=CCO40_RS15430;product=YbeF family transcriptional regulator;protein_id=WP_001282817.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3190169 3191134 . + . ID=gene-CCO40_RS15435;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=CCO40_RS15435;old_locus_tag=CCO40_15435 NZ_CP075116.1 Protein Homology CDS 3190169 3191134 . + 0 ID=cds-WP_000042640.1;Parent=gene-CCO40_RS15435;Dbxref=GenBank:WP_000042640.1;Name=WP_000042640.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=CCO40_RS15435;product=lipoyl synthase;protein_id=WP_000042640.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3191220 3191423 . - . ID=gene-CCO40_RS15440;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=CCO40_RS15440;old_locus_tag=CCO40_15440 NZ_CP075116.1 Protein Homology CDS 3191220 3191423 . - 0 ID=cds-WP_000503938.1;Parent=gene-CCO40_RS15440;Dbxref=GenBank:WP_000503938.1;Name=WP_000503938.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459624.1;locus_tag=CCO40_RS15440;product=twin-arginine translocase subunit TatE;protein_id=WP_000503938.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3191552 3192340 . - . ID=gene-CCO40_RS15445;Name=CCO40_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15445;old_locus_tag=CCO40_15445 NZ_CP075116.1 Protein Homology CDS 3191552 3192340 . - 0 ID=cds-WP_000495782.1;Parent=gene-CCO40_RS15445;Dbxref=GenBank:WP_000495782.1;Name=WP_000495782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459623.1;locus_tag=CCO40_RS15445;product=deaminated glutathione amidase;protein_id=WP_000495782.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3192431 3192814 . + . ID=gene-CCO40_RS15450;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=CCO40_RS15450;old_locus_tag=CCO40_15450 NZ_CP075116.1 Protein Homology CDS 3192431 3192814 . + 0 ID=cds-WP_000939753.1;Parent=gene-CCO40_RS15450;Dbxref=GenBank:WP_000939753.1;Name=WP_000939753.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459622.1;locus_tag=CCO40_RS15450;product=fluoride efflux transporter CrcB;protein_id=WP_000939753.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3192871 3193080 . - . ID=gene-CCO40_RS15455;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=CCO40_RS15455;old_locus_tag=CCO40_15455 NZ_CP075116.1 Protein Homology CDS 3192871 3193080 . - 0 ID=cds-WP_000034826.1;Parent=gene-CCO40_RS15455;Dbxref=GenBank:WP_000034826.1;Name=WP_000034826.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459621.1;locus_tag=CCO40_RS15455;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034826.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3193268 3193840 . - . ID=gene-CCO40_RS15460;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=CCO40_RS15460;old_locus_tag=CCO40_15460 NZ_CP075116.1 Protein Homology CDS 3193268 3193840 . - 0 ID=cds-WP_001623090.1;Parent=gene-CCO40_RS15460;Dbxref=GenBank:WP_001623090.1;Name=WP_001623090.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459620.1;locus_tag=CCO40_RS15460;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_001623090.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3194219 3195604 . + . ID=gene-CCO40_RS15465;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=CCO40_RS15465;old_locus_tag=CCO40_15465 NZ_CP075116.1 Protein Homology CDS 3194219 3195604 . + 0 ID=cds-WP_000958619.1;Parent=gene-CCO40_RS15465;Dbxref=GenBank:WP_000958619.1;Name=WP_000958619.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459619.1;locus_tag=CCO40_RS15465;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000958619.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3195647 3196327 . - . ID=gene-CCO40_RS15470;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=CCO40_RS15470;old_locus_tag=CCO40_15470 NZ_CP075116.1 Protein Homology CDS 3195647 3196327 . - 0 ID=cds-WP_000138786.1;Parent=gene-CCO40_RS15470;Dbxref=GenBank:WP_000138786.1;Name=WP_000138786.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=CCO40_RS15470;product=two-component response regulator DpiA;protein_id=WP_000138786.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3196296 3197957 . - . ID=gene-CCO40_RS15475;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=CCO40_RS15475;old_locus_tag=CCO40_15475 NZ_CP075116.1 Protein Homology CDS 3196296 3197957 . - 0 ID=cds-WP_094889122.1;Parent=gene-CCO40_RS15475;Dbxref=GenBank:WP_094889122.1;Name=WP_094889122.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=CCO40_RS15475;product=sensor histidine kinase DpiB;protein_id=WP_094889122.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3198342 3199418 . + . ID=gene-CCO40_RS15480;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=CCO40_RS15480;old_locus_tag=CCO40_15480 NZ_CP075116.1 Protein Homology CDS 3198342 3199418 . + 0 ID=cds-WP_000467874.1;Parent=gene-CCO40_RS15480;Dbxref=GenBank:WP_000467874.1;Name=WP_000467874.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=CCO40_RS15480;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_000467874.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3199415 3199711 . + . ID=gene-CCO40_RS15485;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=CCO40_RS15485;old_locus_tag=CCO40_15485 NZ_CP075116.1 Protein Homology CDS 3199415 3199711 . + 0 ID=cds-WP_000700679.1;Parent=gene-CCO40_RS15485;Dbxref=GenBank:WP_000700679.1;Name=WP_000700679.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459615.1;locus_tag=CCO40_RS15485;product=citrate lyase acyl carrier protein;protein_id=WP_000700679.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3199708 3200616 . + . ID=gene-CCO40_RS15490;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=CCO40_RS15490;old_locus_tag=CCO40_15490 NZ_CP075116.1 Protein Homology CDS 3199708 3200616 . + 0 ID=cds-WP_000622358.1;Parent=gene-CCO40_RS15490;Dbxref=GenBank:WP_000622358.1;Name=WP_000622358.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=CCO40_RS15490;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_000622358.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3200626 3202155 . + . ID=gene-CCO40_RS15495;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=CCO40_RS15495;old_locus_tag=CCO40_15495 NZ_CP075116.1 Protein Homology CDS 3200626 3202155 . + 0 ID=cds-WP_000192323.1;Parent=gene-CCO40_RS15495;Dbxref=GenBank:WP_000192323.1;Name=WP_000192323.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459613.1;locus_tag=CCO40_RS15495;product=citrate lyase subunit alpha;protein_id=WP_000192323.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3202159 3202710 . + . ID=gene-CCO40_RS15500;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=CCO40_RS15500;old_locus_tag=CCO40_15500 NZ_CP075116.1 Protein Homology CDS 3202159 3202710 . + 0 ID=cds-WP_001236072.1;Parent=gene-CCO40_RS15500;Dbxref=GenBank:WP_001236072.1;Name=WP_001236072.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459612.1;locus_tag=CCO40_RS15500;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_001236072.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3202682 3203578 . + . ID=gene-CCO40_RS15505;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=CCO40_RS15505;old_locus_tag=CCO40_15505 NZ_CP075116.1 Protein Homology CDS 3202682 3203578 . + 0 ID=cds-WP_000982655.1;Parent=gene-CCO40_RS15505;Dbxref=GenBank:WP_000982655.1;Name=WP_000982655.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459611.1;locus_tag=CCO40_RS15505;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000982655.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3203616 3205079 . + . ID=gene-CCO40_RS15510;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=CCO40_RS15510;old_locus_tag=CCO40_15510 NZ_CP075116.1 Protein Homology CDS 3203616 3205079 . + 0 ID=cds-WP_000059028.1;Parent=gene-CCO40_RS15510;Dbxref=GenBank:WP_000059028.1;Name=WP_000059028.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459610.1;locus_tag=CCO40_RS15510;product=citrate/succinate antiporter CitT;protein_id=WP_000059028.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3205189 3205995 . + . ID=gene-CCO40_RS15515;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=CCO40_RS15515;old_locus_tag=CCO40_15515 NZ_CP075116.1 Protein Homology CDS 3205189 3205995 . + 0 ID=cds-WP_001092585.1;Parent=gene-CCO40_RS15515;Dbxref=GenBank:WP_001092585.1;Name=WP_001092585.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459609.1;locus_tag=CCO40_RS15515;product=ribonuclease I;protein_id=WP_001092585.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3206230 3206640 . + . ID=gene-CCO40_RS15520;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=CCO40_RS15520;old_locus_tag=CCO40_15520 NZ_CP075116.1 Protein Homology CDS 3206230 3206640 . + 0 ID=cds-WP_000089748.1;Parent=gene-CCO40_RS15520;Dbxref=GenBank:WP_000089748.1;Name=WP_000089748.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459608.1;locus_tag=CCO40_RS15520;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089748.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3206723 3207961 . - . ID=gene-CCO40_RS15525;Name=CCO40_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15525;old_locus_tag=CCO40_15525 NZ_CP075116.1 Protein Homology CDS 3206723 3207961 . - 0 ID=cds-WP_000646119.1;Parent=gene-CCO40_RS15525;Dbxref=GenBank:WP_000646119.1;Name=WP_000646119.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459607.1;locus_tag=CCO40_RS15525;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_000646119.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3208184 3208612 . + . ID=gene-CCO40_RS15530;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=CCO40_RS15530;old_locus_tag=CCO40_15530 NZ_CP075116.1 Protein Homology CDS 3208184 3208612 . + 0 ID=cds-WP_000278499.1;Parent=gene-CCO40_RS15530;Dbxref=GenBank:WP_000278499.1;Name=WP_000278499.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459606.1;locus_tag=CCO40_RS15530;product=universal stress protein UspG;protein_id=WP_000278499.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3208680 3209447 . - . ID=gene-CCO40_RS15535;Name=CCO40_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15535;old_locus_tag=CCO40_15535 NZ_CP075116.1 Protein Homology CDS 3208680 3209447 . - 0 ID=cds-WP_000417096.1;Parent=gene-CCO40_RS15535;Dbxref=GenBank:WP_000417096.1;Name=WP_000417096.1;Ontology_term=GO:0019645,GO:0009389,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459605.1;locus_tag=CCO40_RS15535;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000417096.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3209447 3210004 . - . ID=gene-CCO40_RS15540;Name=CCO40_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15540;old_locus_tag=CCO40_15540 NZ_CP075116.1 Protein Homology CDS 3209447 3210004 . - 0 ID=cds-WP_001250381.1;Parent=gene-CCO40_RS15540;Dbxref=GenBank:WP_001250381.1;Name=WP_001250381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459604.1;locus_tag=CCO40_RS15540;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001250381.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3210001 3212280 . - . ID=gene-CCO40_RS15545;Name=CCO40_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15545;old_locus_tag=CCO40_15545 NZ_CP075116.1 Protein Homology CDS 3210001 3212280 . - 0 ID=cds-WP_000064322.1;Parent=gene-CCO40_RS15545;Dbxref=GenBank:WP_000064322.1;Name=WP_000064322.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=CCO40_RS15545;product=molybdopterin-dependent oxidoreductase;protein_id=WP_000064322.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3212273 3212833 . - . ID=gene-CCO40_RS15550;Name=CCO40_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15550;old_locus_tag=CCO40_15550 NZ_CP075116.1 Protein Homology CDS 3212273 3212833 . - 0 ID=cds-WP_000377433.1;Parent=gene-CCO40_RS15550;Dbxref=GenBank:WP_000377433.1;Name=WP_000377433.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459602.1;locus_tag=CCO40_RS15550;product=TorD/DmsD family molecular chaperone;protein_id=WP_000377433.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3213166 3214731 . - . ID=gene-CCO40_RS15555;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=CCO40_RS15555;old_locus_tag=CCO40_15555 NZ_CP075116.1 Protein Homology CDS 3213166 3214731 . - 0 ID=cds-WP_000887643.1;Parent=gene-CCO40_RS15555;Dbxref=GenBank:WP_000887643.1;Name=WP_000887643.1;Ontology_term=GO:0000302,GO:0050660,GO:0051287,GO:0102039;gbkey=CDS;gene=ahpF;go_function=flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA,NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459601.1;locus_tag=CCO40_RS15555;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887643.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3214973 3215536 . - . ID=gene-CCO40_RS15560;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=CCO40_RS15560;old_locus_tag=CCO40_15560 NZ_CP075116.1 Protein Homology CDS 3214973 3215536 . - 0 ID=cds-WP_000052802.1;Parent=gene-CCO40_RS15560;Dbxref=GenBank:WP_000052802.1;Name=WP_000052802.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=CCO40_RS15560;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052802.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3215977 3216723 . + . ID=gene-CCO40_RS15565;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=CCO40_RS15565;old_locus_tag=CCO40_15565 NZ_CP075116.1 Protein Homology CDS 3215977 3216723 . + 0 ID=cds-WP_000597131.1;Parent=gene-CCO40_RS15565;Dbxref=GenBank:WP_000597131.1;Name=WP_000597131.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459599.1;locus_tag=CCO40_RS15565;product=thiol:disulfide interchange protein DsbG;protein_id=WP_000597131.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3217040 3217942 . + . ID=gene-CCO40_RS15570;Name=citR;gbkey=Gene;gene=citR;gene_biotype=protein_coding;gene_synonym=ybdO;locus_tag=CCO40_RS15570;old_locus_tag=CCO40_15570 NZ_CP075116.1 Protein Homology CDS 3217040 3217942 . + 0 ID=cds-WP_000002497.1;Parent=gene-CCO40_RS15570;Dbxref=GenBank:WP_000002497.1;Name=WP_000002497.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=citR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459598.1;locus_tag=CCO40_RS15570;product=DNA-binding transcriptional repressor CitR;protein_id=WP_000002497.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3218108 3219343 . + . ID=gene-CCO40_RS15575;Name=CCO40_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15575;old_locus_tag=CCO40_15575 NZ_CP075116.1 Protein Homology CDS 3218108 3219343 . + 0 ID=cds-WP_000118144.1;Parent=gene-CCO40_RS15575;Dbxref=GenBank:WP_000118144.1;Name=WP_000118144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459597.1;locus_tag=CCO40_RS15575;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000118144.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3219316 3219933 . + . ID=gene-CCO40_RS15580;Name=CCO40_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15580;old_locus_tag=CCO40_15580 NZ_CP075116.1 Protein Homology CDS 3219316 3219933 . + 0 ID=cds-WP_001164756.1;Parent=gene-CCO40_RS15580;Dbxref=GenBank:WP_001164756.1;Name=WP_001164756.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459596.1;locus_tag=CCO40_RS15580;product=IbrB-like domain-containing protein;protein_id=WP_001164756.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3219934 3221094 . - . ID=gene-CCO40_RS15585;Name=CCO40_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15585;old_locus_tag=CCO40_15585 NZ_CP075116.1 Protein Homology CDS 3219934 3221094 . - 0 ID=cds-WP_001245597.1;Parent=gene-CCO40_RS15585;Dbxref=GenBank:WP_001245597.1;Name=WP_001245597.1;Ontology_term=GO:0008483,GO:0016740;gbkey=CDS;go_function=transaminase activity|0008483||IEA,transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459595.1;locus_tag=CCO40_RS15585;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_001245597.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3221221 3222309 . + . ID=gene-CCO40_RS15590;Name=CCO40_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15590;old_locus_tag=CCO40_15590 NZ_CP075116.1 Protein Homology CDS 3221221 3222309 . + 0 ID=cds-WP_001016848.1;Parent=gene-CCO40_RS15590;Dbxref=GenBank:WP_001016848.1;Name=WP_001016848.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459594.1;locus_tag=CCO40_RS15590;product=oxidoreductase;protein_id=WP_001016848.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3222345 3222542 . - . ID=gene-CCO40_RS15595;Name=CCO40_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15595;old_locus_tag=CCO40_15595 NZ_CP075116.1 Protein Homology CDS 3222345 3222542 . - 0 ID=cds-WP_000460619.1;Parent=gene-CCO40_RS15595;Dbxref=GenBank:WP_000460619.1;Name=WP_000460619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=CCO40_RS15595;product=YbdD/YjiX family protein;protein_id=WP_000460619.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3222606 3224711 . - . ID=gene-CCO40_RS15600;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=CCO40_RS15600;old_locus_tag=CCO40_15600 NZ_CP075116.1 Protein Homology CDS 3222606 3224711 . - 0 ID=cds-WP_001043108.1;Parent=gene-CCO40_RS15600;Dbxref=GenBank:WP_001043108.1;Name=WP_001043108.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459592.1;locus_tag=CCO40_RS15600;product=pyruvate/proton symporter CstA;protein_id=WP_001043108.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3224893 3225306 . - . ID=gene-CCO40_RS15605;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=CCO40_RS15605;old_locus_tag=CCO40_15605 NZ_CP075116.1 Protein Homology CDS 3224893 3225306 . - 0 ID=cds-WP_000637966.1;Parent=gene-CCO40_RS15605;Dbxref=GenBank:WP_000637966.1;Name=WP_000637966.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459591.1;locus_tag=CCO40_RS15605;product=proofreading thioesterase EntH;protein_id=WP_000637966.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3225309 3226064 . - . ID=gene-CCO40_RS15610;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=CCO40_RS15610;old_locus_tag=CCO40_15610 NZ_CP075116.1 Protein Homology CDS 3225309 3226064 . - 0 ID=cds-WP_000145522.1;Parent=gene-CCO40_RS15610;Dbxref=GenBank:WP_000145522.1;Name=WP_000145522.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459590.1;locus_tag=CCO40_RS15610;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_000145522.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3226064 3226921 . - . ID=gene-CCO40_RS15615;Name=CCO40_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15615;old_locus_tag=CCO40_15615 NZ_CP075116.1 Protein Homology CDS 3226064 3226921 . - 0 ID=cds-WP_001007166.1;Parent=gene-CCO40_RS15615;Dbxref=GenBank:WP_001007166.1;Name=WP_001007166.1;Ontology_term=GO:0008908,GO:0016879;gbkey=CDS;go_function=isochorismatase activity|0008908||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=CCO40_RS15615;product=isochorismatase;protein_id=WP_001007166.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3226935 3228545 . - . ID=gene-CCO40_RS15620;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=CCO40_RS15620;old_locus_tag=CCO40_15620 NZ_CP075116.1 Protein Homology CDS 3226935 3228545 . - 0 ID=cds-WP_001222459.1;Parent=gene-CCO40_RS15620;Dbxref=GenBank:WP_001222459.1;Name=WP_001222459.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459588.1;locus_tag=CCO40_RS15620;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_001222459.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3228555 3229730 . - . ID=gene-CCO40_RS15625;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=CCO40_RS15625;old_locus_tag=CCO40_15625 NZ_CP075116.1 Protein Homology CDS 3228555 3229730 . - 0 ID=cds-WP_000367596.1;Parent=gene-CCO40_RS15625;Dbxref=GenBank:WP_000367596.1;Name=WP_000367596.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=CCO40_RS15625;product=isochorismate synthase EntC;protein_id=WP_000367596.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3230039 3230995 . + . ID=gene-CCO40_RS15630;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=CCO40_RS15630;old_locus_tag=CCO40_15630 NZ_CP075116.1 Protein Homology CDS 3230039 3230995 . + 0 ID=cds-WP_001238992.1;Parent=gene-CCO40_RS15630;Dbxref=GenBank:WP_001238992.1;Name=WP_001238992.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459586.1;locus_tag=CCO40_RS15630;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_001238992.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3231058 3232302 . - . ID=gene-CCO40_RS15635;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=CCO40_RS15635;old_locus_tag=CCO40_15635 NZ_CP075116.1 Protein Homology CDS 3231058 3232302 . - 0 ID=cds-WP_001081661.1;Parent=gene-CCO40_RS15635;Dbxref=GenBank:WP_001081661.1;Name=WP_001081661.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=CCO40_RS15635;product=enterobactin transporter EntS;protein_id=WP_001081661.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3232413 3233420 . + . ID=gene-CCO40_RS15640;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=CCO40_RS15640;old_locus_tag=CCO40_15640 NZ_CP075116.1 Protein Homology CDS 3232413 3233420 . + 0 ID=cds-WP_001277882.1;Parent=gene-CCO40_RS15640;Dbxref=GenBank:WP_001277882.1;Name=WP_001277882.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459584.1;locus_tag=CCO40_RS15640;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_001277882.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3233420 3234409 . + . ID=gene-CCO40_RS15645;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=CCO40_RS15645;old_locus_tag=CCO40_15645 NZ_CP075116.1 Protein Homology CDS 3233420 3234409 . + 0 ID=cds-WP_000480053.1;Parent=gene-CCO40_RS15645;Dbxref=GenBank:WP_000480053.1;Name=WP_000480053.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459583.1;locus_tag=CCO40_RS15645;product=iron-enterobactin ABC transporter permease;protein_id=WP_000480053.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3234406 3235200 . + . ID=gene-CCO40_RS15650;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=CCO40_RS15650;old_locus_tag=CCO40_15650 NZ_CP075116.1 Protein Homology CDS 3234406 3235200 . + 0 ID=cds-WP_000140657.1;Parent=gene-CCO40_RS15650;Dbxref=GenBank:WP_000140657.1;Name=WP_000140657.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459582.1;locus_tag=CCO40_RS15650;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_000140657.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3235253 3236389 . - . ID=gene-CCO40_RS15655;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=CCO40_RS15655;old_locus_tag=CCO40_15655 NZ_CP075116.1 Protein Homology CDS 3235253 3236389 . - 0 ID=cds-WP_001139575.1;Parent=gene-CCO40_RS15655;Dbxref=GenBank:WP_001139575.1;Name=WP_001139575.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=CCO40_RS15655;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_001139575.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3236639 3240523 . - . ID=gene-CCO40_RS15660;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=CCO40_RS15660;old_locus_tag=CCO40_15660 NZ_CP075116.1 Protein Homology CDS 3236639 3240523 . - 0 ID=cds-WP_000194150.1;Parent=gene-CCO40_RS15660;Dbxref=GenBank:WP_000194150.1;Name=WP_000194150.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=CCO40_RS15660;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_000194150.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3240520 3240738 . - . ID=gene-CCO40_RS15665;Name=CCO40_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15665;old_locus_tag=CCO40_15665 NZ_CP075116.1 Protein Homology CDS 3240520 3240738 . - 0 ID=cds-WP_000396006.1;Parent=gene-CCO40_RS15665;Dbxref=GenBank:WP_000396006.1;Name=WP_000396006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459579.1;locus_tag=CCO40_RS15665;product=MbtH family protein;protein_id=WP_000396006.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3240769 3241983 . - . ID=gene-CCO40_RS15670;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=CCO40_RS15670;old_locus_tag=CCO40_15670 NZ_CP075116.1 Protein Homology CDS 3240769 3241983 . - 0 ID=cds-WP_000656604.1;Parent=gene-CCO40_RS15670;Dbxref=GenBank:WP_000656604.1;Name=WP_000656604.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=CCO40_RS15670;product=enterochelin esterase;protein_id=WP_000656604.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3242172 3244427 . + . ID=gene-CCO40_RS15675;Name=CCO40_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15675;old_locus_tag=CCO40_15675 NZ_CP075116.1 Protein Homology CDS 3242172 3244427 . + 0 ID=cds-WP_001034952.1;Parent=gene-CCO40_RS15675;Dbxref=GenBank:WP_001034952.1;Name=WP_001034952.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459577.1;locus_tag=CCO40_RS15675;product=TonB-dependent siderophore receptor;protein_id=WP_001034952.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3244473 3245177 . + . ID=gene-CCO40_RS15680;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=CCO40_RS15680;old_locus_tag=CCO40_15680 NZ_CP075116.1 Protein Homology CDS 3244473 3245177 . + 0 ID=cds-WP_001682240.1;Parent=gene-CCO40_RS15680;Dbxref=GenBank:WP_001682240.1;Name=WP_001682240.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459576.1;locus_tag=CCO40_RS15680;product=enterobactin synthase subunit EntD;protein_id=WP_001682240.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3245189 3246307 . + . ID=gene-CCO40_RS15685;Name=CCO40_RS15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15685;old_locus_tag=CCO40_15685 NZ_CP075116.1 Protein Homology CDS 3245189 3246307 . + 0 ID=cds-WP_001196908.1;Parent=gene-CCO40_RS15685;Dbxref=GenBank:WP_001196908.1;Name=WP_001196908.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=CCO40_RS15685;product=YbdK family carboxylate-amine ligase;protein_id=WP_001196908.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3246374 3246622 . + . ID=gene-CCO40_RS15690;Name=CCO40_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15690;old_locus_tag=CCO40_15690 NZ_CP075116.1 Protein Homology CDS 3246374 3246622 . + 0 ID=cds-WP_000682497.1;Parent=gene-CCO40_RS15690;Dbxref=GenBank:WP_000682497.1;Name=WP_000682497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459574.1;locus_tag=CCO40_RS15690;product=DUF1158 family protein;protein_id=WP_000682497.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3246628 3246969 . - . ID=gene-CCO40_RS15695;Name=CCO40_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15695;old_locus_tag=CCO40_15695 NZ_CP075116.1 Protein Homology CDS 3246628 3246969 . - 0 ID=cds-WP_000155631.1;Parent=gene-CCO40_RS15695;Dbxref=GenBank:WP_000155631.1;Name=WP_000155631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459573.1;locus_tag=CCO40_RS15695;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WP_000155631.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3247258 3247839 . + . ID=gene-CCO40_RS15700;Name=CCO40_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15700;old_locus_tag=CCO40_15700 NZ_CP075116.1 Protein Homology CDS 3247258 3247839 . + 0 ID=cds-WP_000113609.1;Parent=gene-CCO40_RS15700;Dbxref=GenBank:WP_000113609.1;Name=WP_000113609.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459572.1;locus_tag=CCO40_RS15700;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000113609.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3247839 3248207 . + . ID=gene-CCO40_RS15705;Name=CCO40_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15705;old_locus_tag=CCO40_15705 NZ_CP075116.1 Protein Homology CDS 3247839 3248207 . + 0 ID=cds-WP_000348989.1;Parent=gene-CCO40_RS15705;Dbxref=GenBank:WP_000348989.1;Name=WP_000348989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459571.1;locus_tag=CCO40_RS15705;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000348989.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3248304 3248957 . + . ID=gene-CCO40_RS15710;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=CCO40_RS15710;old_locus_tag=CCO40_15710 NZ_CP075116.1 Protein Homology CDS 3248304 3248957 . + 0 ID=cds-WP_000355870.1;Parent=gene-CCO40_RS15710;Dbxref=GenBank:WP_000355870.1;Name=WP_000355870.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459570.1;locus_tag=CCO40_RS15710;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_000355870.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3249157 3249606 . + . ID=gene-CCO40_RS15715;Name=CCO40_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15715;old_locus_tag=CCO40_15715 NZ_CP075116.1 Protein Homology CDS 3249157 3249606 . + 0 ID=cds-WP_001216659.1;Parent=gene-CCO40_RS15715;Dbxref=GenBank:WP_001216659.1;Name=WP_001216659.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225684.1;locus_tag=CCO40_RS15715;product=PTS sugar transporter subunit IIA;protein_id=WP_001216659.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3249584 3250054 . + . ID=gene-CCO40_RS15720;Name=CCO40_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15720;old_locus_tag=CCO40_15720 NZ_CP075116.1 Protein Homology CDS 3249584 3250054 . + 0 ID=cds-WP_000594177.1;Parent=gene-CCO40_RS15720;Dbxref=GenBank:WP_000594177.1;Name=WP_000594177.1;Ontology_term=GO:0008643,GO:0009401,GO:0034219,GO:0008982,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459568.1;locus_tag=CCO40_RS15720;product=PTS sugar transporter subunit IIB;protein_id=WP_000594177.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3250069 3250812 . + . ID=gene-CCO40_RS15725;Name=CCO40_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15725;old_locus_tag=CCO40_15725 NZ_CP075116.1 Protein Homology CDS 3250069 3250812 . + 0 ID=cds-WP_000927523.1;Parent=gene-CCO40_RS15725;Dbxref=GenBank:WP_000927523.1;Name=WP_000927523.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459567.1;locus_tag=CCO40_RS15725;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000927523.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3250815 3251669 . + . ID=gene-CCO40_RS15730;Name=CCO40_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15730;old_locus_tag=CCO40_15730 NZ_CP075116.1 Protein Homology CDS 3250815 3251669 . + 0 ID=cds-WP_000005803.1;Parent=gene-CCO40_RS15730;Dbxref=GenBank:WP_000005803.1;Name=WP_000005803.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459566.1;locus_tag=CCO40_RS15730;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000005803.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3251702 3252745 . + . ID=gene-CCO40_RS15735;Name=CCO40_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15735;old_locus_tag=CCO40_15735 NZ_CP075116.1 Protein Homology CDS 3251702 3252745 . + 0 ID=cds-WP_010988979.1;Parent=gene-CCO40_RS15735;Dbxref=GenBank:WP_010988979.1;Name=WP_010988979.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459565.1;locus_tag=CCO40_RS15735;product=glutamine--fructose-6-phosphate aminotransferase;protein_id=WP_010988979.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3252812 3253798 . + . ID=gene-CCO40_RS15740;Name=CCO40_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15740;old_locus_tag=CCO40_15740 NZ_CP075116.1 Protein Homology CDS 3252812 3253798 . + 0 ID=cds-WP_000109360.1;Parent=gene-CCO40_RS15740;Dbxref=GenBank:WP_000109360.1;Name=WP_000109360.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459564.1;locus_tag=CCO40_RS15740;product=SIS domain-containing protein;protein_id=WP_000109360.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3253926 3256655 . - . ID=gene-CCO40_RS15745;Name=CCO40_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15745;old_locus_tag=CCO40_15745 NZ_CP075116.1 Protein Homology CDS 3253926 3256655 . - 0 ID=cds-WP_001031460.1;Parent=gene-CCO40_RS15745;Dbxref=GenBank:WP_001031460.1;Name=WP_001031460.1;Ontology_term=GO:0006355,GO:0009401,GO:0001216,GO:0005524,GO:0016301,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459563.1;locus_tag=CCO40_RS15745;product=sigma-54-dependent transcriptional regulator;protein_id=WP_001031460.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3256822 3258792 . - . ID=gene-CCO40_RS15750;Name=CCO40_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15750;old_locus_tag=CCO40_15750 NZ_CP075116.1 Protein Homology CDS 3256822 3258792 . - 0 ID=cds-WP_000192437.1;Parent=gene-CCO40_RS15750;Dbxref=GenBank:WP_000192437.1;Name=WP_000192437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=CCO40_RS15750;product=autotransporter domain-containing esterase;protein_id=WP_000192437.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3259103 3260350 . + . ID=gene-CCO40_RS15755;Name=CCO40_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15755;old_locus_tag=CCO40_15755 NZ_CP075116.1 Protein Homology CDS 3259103 3260350 . + 0 ID=cds-WP_001156978.1;Parent=gene-CCO40_RS15755;Dbxref=GenBank:WP_001156978.1;Name=WP_001156978.1;Ontology_term=GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459561.1;locus_tag=CCO40_RS15755;product=mechanosensitive ion channel family protein;protein_id=WP_001156978.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3260392 3261786 . - . ID=gene-CCO40_RS15760;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=CCO40_RS15760;old_locus_tag=CCO40_15760 NZ_CP075116.1 Protein Homology CDS 3260392 3261786 . - 0 ID=cds-WP_000786288.1;Parent=gene-CCO40_RS15760;Dbxref=GenBank:WP_000786288.1;Name=WP_000786288.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=CCO40_RS15760;product=phenylalanine transporter;protein_id=WP_000786288.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3262112 3263287 . + . ID=gene-CCO40_RS15765;Name=CCO40_RS15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15765;old_locus_tag=CCO40_15765 NZ_CP075116.1 Protein Homology CDS 3262112 3263287 . + 0 ID=cds-WP_001033457.1;Parent=gene-CCO40_RS15765;Dbxref=GenBank:WP_001033457.1;Name=WP_001033457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=CCO40_RS15765;product=coiled-coil domain-containing protein;protein_id=WP_001033457.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3263366 3263926 . - . ID=gene-CCO40_RS15770;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=CCO40_RS15770;old_locus_tag=CCO40_15770 NZ_CP075116.1 Protein Homology CDS 3263366 3263926 . - 0 ID=cds-WP_000362180.1;Parent=gene-CCO40_RS15770;Dbxref=GenBank:WP_000362180.1;Name=WP_000362180.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459558.1;locus_tag=CCO40_RS15770;product=reactive chlorine resistance membrane protein RclC;protein_id=WP_000362180.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3263939 3264175 . - . ID=gene-CCO40_RS15775;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=CCO40_RS15775;old_locus_tag=CCO40_15775 NZ_CP075116.1 Protein Homology CDS 3263939 3264175 . - 0 ID=cds-WP_094889123.1;Parent=gene-CCO40_RS15775;Dbxref=GenBank:WP_094889123.1;Name=WP_094889123.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459557.1;locus_tag=CCO40_RS15775;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WP_094889123.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3264332 3265657 . - . ID=gene-CCO40_RS15780;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=CCO40_RS15780;old_locus_tag=CCO40_15780 NZ_CP075116.1 Protein Homology CDS 3264332 3265657 . - 0 ID=cds-WP_000195929.1;Parent=gene-CCO40_RS15780;Dbxref=GenBank:WP_000195929.1;Name=WP_000195929.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=CCO40_RS15780;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WP_000195929.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3265873 3266727 . + . ID=gene-CCO40_RS15785;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=CCO40_RS15785;old_locus_tag=CCO40_15785 NZ_CP075116.1 Protein Homology CDS 3265873 3266727 . + 0 ID=cds-WP_000339633.1;Parent=gene-CCO40_RS15785;Dbxref=GenBank:WP_000339633.1;Name=WP_000339633.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459555.1;locus_tag=CCO40_RS15785;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WP_000339633.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3266778 3267017 . - . ID=gene-CCO40_RS15790;Name=CCO40_RS15790;end_range=3267017,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS15790;old_locus_tag=CCO40_15790;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 3266778 3267017 . - 0 ID=cds-CCO40_RS15790;Parent=gene-CCO40_RS15790;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=3267017,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000574020.1;locus_tag=CCO40_RS15790;partial=true;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3267021 3267395 . + . ID=gene-CCO40_RS15795;Name=CCO40_RS15795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS15795;old_locus_tag=CCO40_15795;partial=true;pseudo=true;start_range=.,3267021 NZ_CP075116.1 Protein Homology CDS 3267021 3267395 . + 0 ID=cds-CCO40_RS15795;Parent=gene-CCO40_RS15795;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000635961.1;locus_tag=CCO40_RS15795;partial=true;product=ATP-binding protein;pseudo=true;start_range=.,3267021;transl_table=11 NZ_CP075116.1 RefSeq gene 3267595 3267765 . + . ID=gene-CCO40_RS15800;Name=CCO40_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15800;old_locus_tag=CCO40_15800 NZ_CP075116.1 Protein Homology CDS 3267595 3267765 . + 0 ID=cds-WP_001683811.1;Parent=gene-CCO40_RS15800;Dbxref=GenBank:WP_001683811.1;Name=WP_001683811.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF054588.1;locus_tag=CCO40_RS15800;product=PcoE/SilE family metal-binding protein;protein_id=WP_001683811.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3267929 3268022 . - . ID=gene-CCO40_RS15805;Name=CCO40_RS15805;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS15805;old_locus_tag=CCO40_15805 NZ_CP075116.1 tRNAscan-SE tRNA 3267929 3268022 . - . ID=rna-CCO40_RS15805;Parent=gene-CCO40_RS15805;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS15805;product=tRNA-OTHER NZ_CP075116.1 tRNAscan-SE exon 3267929 3268022 . - . ID=exon-CCO40_RS15805-1;Parent=rna-CCO40_RS15805;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS15805;product=tRNA-OTHER NZ_CP075116.1 RefSeq gene 3268263 3268625 . + . ID=gene-CCO40_RS15810;Name=CCO40_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15810;old_locus_tag=CCO40_15810 NZ_CP075116.1 Protein Homology CDS 3268263 3268625 . + 0 ID=cds-WP_000915523.1;Parent=gene-CCO40_RS15810;Dbxref=GenBank:WP_000915523.1;Name=WP_000915523.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459552.1;locus_tag=CCO40_RS15810;product=GtrA family protein;protein_id=WP_000915523.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3268622 3269548 . + . ID=gene-CCO40_RS15815;Name=CCO40_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15815;old_locus_tag=CCO40_15815 NZ_CP075116.1 Protein Homology CDS 3268622 3269548 . + 0 ID=cds-WP_000703614.1;Parent=gene-CCO40_RS15815;Dbxref=GenBank:WP_000703614.1;Name=WP_000703614.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459551.1;locus_tag=CCO40_RS15815;product=glycosyltransferase family 2 protein;protein_id=WP_000703614.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3269529 3271181 . + . ID=gene-CCO40_RS15820;Name=gtrC1;gbkey=Gene;gene=gtrC1;gene_biotype=protein_coding;locus_tag=CCO40_RS15820;old_locus_tag=CCO40_15820 NZ_CP075116.1 Protein Homology CDS 3269529 3271181 . + 0 ID=cds-WP_010988978.1;Parent=gene-CCO40_RS15820;Dbxref=GenBank:WP_010988978.1;Name=WP_010988978.1;gbkey=CDS;gene=gtrC1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459550.1;locus_tag=CCO40_RS15820;product=putative glucosyltransferase GtrC1;protein_id=WP_010988978.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3271568 3271786 . + . ID=gene-CCO40_RS22520;Name=CCO40_RS22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22520 NZ_CP075116.1 Protein Homology CDS 3271568 3271786 . + 0 ID=cds-WP_001541675.1;Parent=gene-CCO40_RS22520;Dbxref=GenBank:WP_001541675.1;Name=WP_001541675.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013677.7;locus_tag=CCO40_RS22520;product=IS3 family transposase;protein_id=WP_001541675.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3271821 3272235 . + . ID=gene-CCO40_RS22525;Name=CCO40_RS22525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22525;partial=true;pseudo=true;start_range=.,3271821 NZ_CP075116.1 Protein Homology CDS 3271821 3272235 . + 0 ID=cds-CCO40_RS22525;Parent=gene-CCO40_RS22525;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612006.1;locus_tag=CCO40_RS22525;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,3271821;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3272204 3272329 . + . ID=gene-CCO40_RS15830;Name=CCO40_RS15830;end_range=3272329,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS15830;old_locus_tag=CCO40_15830;partial=true;pseudo=true;start_range=.,3272204 NZ_CP075116.1 Protein Homology CDS 3272204 3272329 . + 0 ID=cds-CCO40_RS15830;Parent=gene-CCO40_RS15830;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3272329,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415069.1;locus_tag=CCO40_RS15830;partial=true;product=integrase;pseudo=true;start_range=.,3272204;transl_table=11 NZ_CP075116.1 RefSeq gene 3272351 3272427 . - . ID=gene-CCO40_RS15835;Name=CCO40_RS15835;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS15835;old_locus_tag=CCO40_15835 NZ_CP075116.1 tRNAscan-SE tRNA 3272351 3272427 . - . ID=rna-CCO40_RS15835;Parent=gene-CCO40_RS15835;anticodon=(pos:complement(3272391..3272393));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS15835;product=tRNA-Arg NZ_CP075116.1 tRNAscan-SE exon 3272351 3272427 . - . ID=exon-CCO40_RS15835-1;Parent=rna-CCO40_RS15835;anticodon=(pos:complement(3272391..3272393));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS15835;product=tRNA-Arg NZ_CP075116.1 RefSeq gene 3272682 3273278 . + . ID=gene-CCO40_RS15840;Name=fimW;gbkey=Gene;gene=fimW;gene_biotype=protein_coding;locus_tag=CCO40_RS15840;old_locus_tag=CCO40_15840 NZ_CP075116.1 Protein Homology CDS 3272682 3273278 . + 0 ID=cds-WP_000948629.1;Parent=gene-CCO40_RS15840;Dbxref=GenBank:WP_000948629.1;Name=WP_000948629.1;gbkey=CDS;gene=fimW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459547.1;locus_tag=CCO40_RS15840;product=fimbria biosynthesis transcriptional regulator FimW;protein_id=WP_000948629.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3273440 3273751 . + . ID=gene-CCO40_RS15845;Name=CCO40_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15845;old_locus_tag=CCO40_15845 NZ_CP075116.1 Protein Homology CDS 3273440 3273751 . + 0 ID=cds-WP_000226501.1;Parent=gene-CCO40_RS15845;Dbxref=GenBank:WP_000226501.1;Name=WP_000226501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459546.1;locus_tag=CCO40_RS15845;product=hypothetical protein;protein_id=WP_000226501.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3273770 3274492 . + . ID=gene-CCO40_RS15850;Name=fimY;gbkey=Gene;gene=fimY;gene_biotype=protein_coding;locus_tag=CCO40_RS15850;old_locus_tag=CCO40_15850 NZ_CP075116.1 Protein Homology CDS 3273770 3274492 . + 0 ID=cds-WP_001258123.1;Parent=gene-CCO40_RS15850;Dbxref=GenBank:WP_001258123.1;Name=WP_001258123.1;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459545.1;locus_tag=CCO40_RS15850;product=fimbria biosynthesis regulator FimY;protein_id=WP_001258123.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3275096 3275728 . + . ID=gene-CCO40_RS15855;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=CCO40_RS15855;old_locus_tag=CCO40_15855 NZ_CP075116.1 Protein Homology CDS 3275096 3275728 . + 0 ID=cds-WP_000801273.1;Parent=gene-CCO40_RS15855;Dbxref=GenBank:WP_000801273.1;Name=WP_000801273.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459544.1;locus_tag=CCO40_RS15855;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_000801273.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3275774 3276292 . - . ID=gene-CCO40_RS15860;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=CCO40_RS15860;old_locus_tag=CCO40_15860 NZ_CP075116.1 Protein Homology CDS 3275774 3276292 . - 0 ID=cds-WP_000577507.1;Parent=gene-CCO40_RS15860;Dbxref=GenBank:WP_000577507.1;Name=WP_000577507.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459543.1;locus_tag=CCO40_RS15860;product=fimbria assembly protein;protein_id=WP_000577507.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3276302 3277309 . - . ID=gene-CCO40_RS15865;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=CCO40_RS15865;old_locus_tag=CCO40_15865 NZ_CP075116.1 Protein Homology CDS 3276302 3277309 . - 0 ID=cds-WP_000708662.1;Parent=gene-CCO40_RS15865;Dbxref=GenBank:WP_000708662.1;Name=WP_000708662.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459542.1;locus_tag=CCO40_RS15865;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_000708662.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3277324 3279936 . - . ID=gene-CCO40_RS15870;Name=CCO40_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15870;old_locus_tag=CCO40_15870 NZ_CP075116.1 Protein Homology CDS 3277324 3279936 . - 0 ID=cds-WP_000754233.1;Parent=gene-CCO40_RS15870;Dbxref=GenBank:WP_000754233.1;Name=WP_000754233.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=CCO40_RS15870;product=fimbrial biogenesis usher protein;protein_id=WP_000754233.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3279967 3280659 . - . ID=gene-CCO40_RS15875;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=CCO40_RS15875;old_locus_tag=CCO40_15875 NZ_CP075116.1 Protein Homology CDS 3279967 3280659 . - 0 ID=cds-WP_000935025.1;Parent=gene-CCO40_RS15875;Dbxref=GenBank:WP_000935025.1;Name=WP_000935025.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459540.1;locus_tag=CCO40_RS15875;product=type 1 fimbria chaperone FimC;protein_id=WP_000935025.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3280703 3281236 . - . ID=gene-CCO40_RS15880;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=CCO40_RS15880;old_locus_tag=CCO40_15880 NZ_CP075116.1 Protein Homology CDS 3280703 3281236 . - 0 ID=cds-WP_000619606.1;Parent=gene-CCO40_RS15880;Dbxref=GenBank:WP_000619606.1;Name=WP_000619606.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=CCO40_RS15880;product=type 1 fimbrial protein subunit FimI;protein_id=WP_000619606.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3281312 3281869 . - . ID=gene-CCO40_RS15885;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=CCO40_RS15885;old_locus_tag=CCO40_15885 NZ_CP075116.1 Protein Homology CDS 3281312 3281869 . - 0 ID=cds-WP_000681030.1;Parent=gene-CCO40_RS15885;Dbxref=GenBank:WP_000681030.1;Name=WP_000681030.1;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459538.3;locus_tag=CCO40_RS15885;product=type 1 fimbrial protein subunit FimA;protein_id=WP_000681030.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3282416 3283282 . + . ID=gene-CCO40_RS15890;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=CCO40_RS15890;old_locus_tag=CCO40_15890 NZ_CP075116.1 Protein Homology CDS 3282416 3283282 . + 0 ID=cds-WP_000729165.1;Parent=gene-CCO40_RS15890;Dbxref=GenBank:WP_000729165.1;Name=WP_000729165.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459537.1;locus_tag=CCO40_RS15890;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729165.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3283284 3283496 . + . ID=gene-CCO40_RS15895;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=CCO40_RS15895;old_locus_tag=CCO40_15895 NZ_CP075116.1 Protein Homology CDS 3283284 3283496 . + 0 ID=cds-WP_000190278.1;Parent=gene-CCO40_RS15895;Dbxref=GenBank:WP_000190278.1;Name=WP_000190278.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459536.1;locus_tag=CCO40_RS15895;product=ribosome-associated protein YbcJ;protein_id=WP_000190278.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3283624 3284169 . + . ID=gene-CCO40_RS15900;Name=CCO40_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15900;old_locus_tag=CCO40_15900 NZ_CP075116.1 Protein Homology CDS 3283624 3284169 . + 0 ID=cds-WP_045717854.1;Parent=gene-CCO40_RS15900;Dbxref=GenBank:WP_045717854.1;Name=WP_045717854.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459535.1;locus_tag=CCO40_RS15900;product=metal-dependent hydrolase;protein_id=WP_045717854.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3284162 3284599 . + . ID=gene-CCO40_RS15905;Name=CCO40_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15905;old_locus_tag=CCO40_15905 NZ_CP075116.1 Protein Homology CDS 3284162 3284599 . + 0 ID=cds-WP_001038574.1;Parent=gene-CCO40_RS15905;Dbxref=GenBank:WP_001038574.1;Name=WP_001038574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459534.1;locus_tag=CCO40_RS15905;product=STM0539 family protein;protein_id=WP_001038574.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3284596 3285420 . + . ID=gene-CCO40_RS15910;Name=CCO40_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15910;old_locus_tag=CCO40_15910 NZ_CP075116.1 Protein Homology CDS 3284596 3285420 . + 0 ID=cds-WP_045717853.1;Parent=gene-CCO40_RS15910;Dbxref=GenBank:WP_045717853.1;Name=WP_045717853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459533.1;locus_tag=CCO40_RS15910;product=DUF2145 domain-containing protein;protein_id=WP_045717853.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3285465 3286850 . - . ID=gene-CCO40_RS15915;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=CCO40_RS15915;old_locus_tag=CCO40_15915 NZ_CP075116.1 Protein Homology CDS 3285465 3286850 . - 0 ID=cds-WP_000912377.1;Parent=gene-CCO40_RS15915;Dbxref=GenBank:WP_000912377.1;Name=WP_000912377.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=CCO40_RS15915;product=cysteine--tRNA ligase;protein_id=WP_000912377.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3287023 3287517 . + . ID=gene-CCO40_RS15920;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=CCO40_RS15920;old_locus_tag=CCO40_15920 NZ_CP075116.1 Protein Homology CDS 3287023 3287517 . + 0 ID=cds-WP_000255991.1;Parent=gene-CCO40_RS15920;Dbxref=GenBank:WP_000255991.1;Name=WP_000255991.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=CCO40_RS15920;product=peptidylprolyl isomerase B;protein_id=WP_000255991.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3287520 3288242 . + . ID=gene-CCO40_RS15925;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=CCO40_RS15925;old_locus_tag=CCO40_15925 NZ_CP075116.1 Protein Homology CDS 3287520 3288242 . + 0 ID=cds-WP_000212284.1;Parent=gene-CCO40_RS15925;Dbxref=GenBank:WP_000212284.1;Name=WP_000212284.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459530.1;locus_tag=CCO40_RS15925;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_000212284.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3288360 3288869 . + . ID=gene-CCO40_RS15930;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=CCO40_RS15930;old_locus_tag=CCO40_15930 NZ_CP075116.1 Protein Homology CDS 3288360 3288869 . + 0 ID=cds-WP_000098736.1;Parent=gene-CCO40_RS15930;Dbxref=GenBank:WP_000098736.1;Name=WP_000098736.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459529.1;locus_tag=CCO40_RS15930;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_000098736.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3288866 3289933 . + . ID=gene-CCO40_RS15935;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=CCO40_RS15935;old_locus_tag=CCO40_15935 NZ_CP075116.1 Protein Homology CDS 3288866 3289933 . + 0 ID=cds-WP_000815601.1;Parent=gene-CCO40_RS15935;Dbxref=GenBank:WP_000815601.1;Name=WP_000815601.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459528.1;locus_tag=CCO40_RS15935;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_000815601.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3289974 3290867 . - . ID=gene-CCO40_RS15940;Name=CCO40_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15940;old_locus_tag=CCO40_15940 NZ_CP075116.1 Protein Homology CDS 3289974 3290867 . - 0 ID=cds-WP_000855337.1;Parent=gene-CCO40_RS15940;Dbxref=GenBank:WP_000855337.1;Name=WP_000855337.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459527.1;locus_tag=CCO40_RS15940;product=carbamate kinase;protein_id=WP_000855337.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3290871 3291680 . - . ID=gene-CCO40_RS15945;Name=CCO40_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15945;old_locus_tag=CCO40_15945 NZ_CP075116.1 Protein Homology CDS 3290871 3291680 . - 0 ID=cds-WP_094889124.1;Parent=gene-CCO40_RS15945;Dbxref=GenBank:WP_094889124.1;Name=WP_094889124.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459526.1;locus_tag=CCO40_RS15945;product=oxamate carbamoyltransferase subunit AllH family protein;protein_id=WP_094889124.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3291692 3292951 . - . ID=gene-CCO40_RS15950;Name=CCO40_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15950;old_locus_tag=CCO40_15950 NZ_CP075116.1 Protein Homology CDS 3291692 3292951 . - 0 ID=cds-WP_000495330.1;Parent=gene-CCO40_RS15950;Dbxref=GenBank:WP_000495330.1;Name=WP_000495330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459525.1;locus_tag=CCO40_RS15950;product=YlbE family protein;protein_id=WP_000495330.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3292961 3294625 . - . ID=gene-CCO40_RS15955;Name=CCO40_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15955;old_locus_tag=CCO40_15955 NZ_CP075116.1 Protein Homology CDS 3292961 3294625 . - 0 ID=cds-WP_023238710.1;Parent=gene-CCO40_RS15955;Dbxref=GenBank:WP_023238710.1;Name=WP_023238710.1;Ontology_term=GO:0000256,GO:0006099,GO:0004774,GO:0050205;gbkey=CDS;go_function=succinate-CoA ligase activity|0004774||IEA,oxamate carbamoyltransferase activity|0050205||IEA;go_process=allantoin catabolic process|0000256||IEA,tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459524.1;locus_tag=CCO40_RS15955;product=acyl-CoA synthetase FdrA;protein_id=WP_023238710.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3294941 3295990 . + . ID=gene-CCO40_RS15960;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=CCO40_RS15960;old_locus_tag=CCO40_15960 NZ_CP075116.1 Protein Homology CDS 3294941 3295990 . + 0 ID=cds-WP_094889125.1;Parent=gene-CCO40_RS15960;Dbxref=GenBank:WP_094889125.1;Name=WP_094889125.1;gbkey=CDS;gene=allD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459523.1;locus_tag=CCO40_RS15960;product=ureidoglycolate dehydrogenase AllD;protein_id=WP_094889125.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3296012 3297247 . + . ID=gene-CCO40_RS15965;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=CCO40_RS15965;old_locus_tag=CCO40_15965 NZ_CP075116.1 Protein Homology CDS 3296012 3297247 . + 0 ID=cds-WP_023210789.1;Parent=gene-CCO40_RS15965;Dbxref=GenBank:WP_023210789.1;Name=WP_023210789.1;Ontology_term=GO:0000256,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459522.1;locus_tag=CCO40_RS15965;product=allantoate deiminase;protein_id=WP_023210789.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3297258 3298043 . + . ID=gene-CCO40_RS15970;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=CCO40_RS15970;old_locus_tag=CCO40_15970 NZ_CP075116.1 Protein Homology CDS 3297258 3298043 . + 0 ID=cds-WP_000540985.1;Parent=gene-CCO40_RS15970;Dbxref=GenBank:WP_000540985.1;Name=WP_000540985.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459521.1;locus_tag=CCO40_RS15970;product=(S)-ureidoglycine aminohydrolase;protein_id=WP_000540985.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3298123 3299271 . - . ID=gene-CCO40_RS15975;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=CCO40_RS15975;old_locus_tag=CCO40_15975 NZ_CP075116.1 Protein Homology CDS 3298123 3299271 . - 0 ID=cds-WP_094889126.1;Parent=gene-CCO40_RS15975;Dbxref=GenBank:WP_094889126.1;Name=WP_094889126.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459520.1;locus_tag=CCO40_RS15975;product=glycerate 3-kinase;protein_id=WP_094889126.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3299294 3300592 . - . ID=gene-CCO40_RS15980;Name=CCO40_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15980;old_locus_tag=CCO40_15980 NZ_CP075116.1 Protein Homology CDS 3299294 3300592 . - 0 ID=cds-WP_000484505.1;Parent=gene-CCO40_RS15980;Dbxref=GenBank:WP_000484505.1;Name=WP_000484505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459519.1;locus_tag=CCO40_RS15980;product=uracil/xanthine transporter;protein_id=WP_000484505.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3300651 3302012 . - . ID=gene-CCO40_RS15985;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=CCO40_RS15985;old_locus_tag=CCO40_15985 NZ_CP075116.1 Protein Homology CDS 3300651 3302012 . - 0 ID=cds-WP_094889127.1;Parent=gene-CCO40_RS15985;Dbxref=GenBank:WP_094889127.1;Name=WP_094889127.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459518.1;locus_tag=CCO40_RS15985;product=allantoinase AllB;protein_id=WP_094889127.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3302091 3303545 . - . ID=gene-CCO40_RS15990;Name=CCO40_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15990;old_locus_tag=CCO40_15990 NZ_CP075116.1 Protein Homology CDS 3302091 3303545 . - 0 ID=cds-WP_000401063.1;Parent=gene-CCO40_RS15990;Dbxref=GenBank:WP_000401063.1;Name=WP_000401063.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=CCO40_RS15990;product=allantoin transporter;protein_id=WP_000401063.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3303641 3304888 . - . ID=gene-CCO40_RS15995;Name=CCO40_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS15995;old_locus_tag=CCO40_15995 NZ_CP075116.1 Protein Homology CDS 3303641 3304888 . - 0 ID=cds-WP_000005068.1;Parent=gene-CCO40_RS15995;Dbxref=GenBank:WP_000005068.1;Name=WP_000005068.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459515.1;locus_tag=CCO40_RS15995;product=MFS transporter;protein_id=WP_000005068.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3304954 3305832 . - . ID=gene-CCO40_RS16000;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=CCO40_RS16000;old_locus_tag=CCO40_16000 NZ_CP075116.1 Protein Homology CDS 3304954 3305832 . - 0 ID=cds-WP_000765815.1;Parent=gene-CCO40_RS16000;Dbxref=GenBank:WP_000765815.1;Name=WP_000765815.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459514.1;locus_tag=CCO40_RS16000;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000765815.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3305933 3306709 . - . ID=gene-CCO40_RS16005;Name=gip;gbkey=Gene;gene=gip;gene_biotype=protein_coding;locus_tag=CCO40_RS16005;old_locus_tag=CCO40_16005 NZ_CP075116.1 Protein Homology CDS 3305933 3306709 . - 0 ID=cds-WP_000943591.1;Parent=gene-CCO40_RS16005;Dbxref=GenBank:WP_000943591.1;Name=WP_000943591.1;gbkey=CDS;gene=gip;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459513.1;locus_tag=CCO40_RS16005;product=hydroxypyruvate isomerase Gip;protein_id=WP_000943591.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3306722 3308503 . - . ID=gene-CCO40_RS16010;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=CCO40_RS16010;old_locus_tag=CCO40_16010 NZ_CP075116.1 Protein Homology CDS 3306722 3308503 . - 0 ID=cds-WP_001096868.1;Parent=gene-CCO40_RS16010;Dbxref=GenBank:WP_001096868.1;Name=WP_001096868.1;Ontology_term=GO:0009436,GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459512.1;locus_tag=CCO40_RS16010;product=glyoxylate carboligase;protein_id=WP_001096868.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3308588 3309406 . - . ID=gene-CCO40_RS16015;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=CCO40_RS16015;old_locus_tag=CCO40_16015 NZ_CP075116.1 Protein Homology CDS 3308588 3309406 . - 0 ID=cds-WP_000141265.1;Parent=gene-CCO40_RS16015;Dbxref=GenBank:WP_000141265.1;Name=WP_000141265.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459511.1;locus_tag=CCO40_RS16015;product=HTH-type transcriptional repressor AllR;protein_id=WP_000141265.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3309485 3309967 . - . ID=gene-CCO40_RS16020;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=CCO40_RS16020;old_locus_tag=CCO40_16020 NZ_CP075116.1 Protein Homology CDS 3309485 3309967 . - 0 ID=cds-WP_000764659.1;Parent=gene-CCO40_RS16020;Dbxref=GenBank:WP_000764659.1;Name=WP_000764659.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459510.1;locus_tag=CCO40_RS16020;product=ureidoglycolate lyase;protein_id=WP_000764659.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3310194 3311120 . + . ID=gene-CCO40_RS16025;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=CCO40_RS16025;old_locus_tag=CCO40_16025 NZ_CP075116.1 Protein Homology CDS 3310194 3311120 . + 0 ID=cds-WP_000460169.1;Parent=gene-CCO40_RS16025;Dbxref=GenBank:WP_000460169.1;Name=WP_000460169.1;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459509.1;locus_tag=CCO40_RS16025;product=HTH-type transcriptional activator AllS;protein_id=WP_000460169.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3311190 3312284 . + . ID=gene-CCO40_RS16030;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=CCO40_RS16030;old_locus_tag=CCO40_16030 NZ_CP075116.1 Protein Homology CDS 3311190 3312284 . + 0 ID=cds-WP_001154076.1;Parent=gene-CCO40_RS16030;Dbxref=GenBank:WP_001154076.1;Name=WP_001154076.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459508.1;locus_tag=CCO40_RS16030;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_001154076.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3312323 3312982 . - . ID=gene-CCO40_RS16035;Name=CCO40_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16035;old_locus_tag=CCO40_16035 NZ_CP075116.1 Protein Homology CDS 3312323 3312982 . - 0 ID=cds-WP_000342247.1;Parent=gene-CCO40_RS16035;Dbxref=GenBank:WP_000342247.1;Name=WP_000342247.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459507.1;locus_tag=CCO40_RS16035;product=methionine ABC transporter permease;protein_id=WP_000342247.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3312975 3313991 . - . ID=gene-CCO40_RS16040;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=CCO40_RS16040;old_locus_tag=CCO40_16040 NZ_CP075116.1 Protein Homology CDS 3312975 3313991 . - 0 ID=cds-WP_000569661.1;Parent=gene-CCO40_RS16040;Dbxref=GenBank:WP_000569661.1;Name=WP_000569661.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459506.1;locus_tag=CCO40_RS16040;product=virulence-associated ABC transporter ATP-binding protein SfbB;protein_id=WP_000569661.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3314028 3314858 . - . ID=gene-CCO40_RS16045;Name=CCO40_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16045;old_locus_tag=CCO40_16045 NZ_CP075116.1 Protein Homology CDS 3314028 3314858 . - 0 ID=cds-WP_000524317.1;Parent=gene-CCO40_RS16045;Dbxref=GenBank:WP_000524317.1;Name=WP_000524317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459505.1;locus_tag=CCO40_RS16045;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_000524317.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3315115 3316248 . - . ID=gene-CCO40_RS16050;Name=CCO40_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16050;old_locus_tag=CCO40_16050 NZ_CP075116.1 Protein Homology CDS 3315115 3316248 . - 0 ID=cds-WP_000152869.1;Parent=gene-CCO40_RS16050;Dbxref=GenBank:WP_000152869.1;Name=WP_000152869.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=CCO40_RS16050;product=porin;protein_id=WP_000152869.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3316434 3318848 . - . ID=gene-CCO40_RS16055;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=CCO40_RS16055;old_locus_tag=CCO40_16055 NZ_CP075116.1 Protein Homology CDS 3316434 3318848 . - 0 ID=cds-WP_000561765.1;Parent=gene-CCO40_RS16055;Dbxref=GenBank:WP_000561765.1;Name=WP_000561765.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=CCO40_RS16055;product=putative ABC transporter permease subunit YbbP;protein_id=WP_000561765.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3318845 3319531 . - . ID=gene-CCO40_RS16060;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=CCO40_RS16060;old_locus_tag=CCO40_16060 NZ_CP075116.1 Protein Homology CDS 3318845 3319531 . - 0 ID=cds-WP_001110598.1;Parent=gene-CCO40_RS16060;Dbxref=GenBank:WP_001110598.1;Name=WP_001110598.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459502.1;locus_tag=CCO40_RS16060;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_001110598.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3319502 3320116 . + . ID=gene-CCO40_RS16065;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=CCO40_RS16065;old_locus_tag=CCO40_16065 NZ_CP075116.1 Protein Homology CDS 3319502 3320116 . + 0 ID=cds-WP_045717216.1;Parent=gene-CCO40_RS16065;Dbxref=GenBank:WP_045717216.1;Name=WP_045717216.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459501.1;locus_tag=CCO40_RS16065;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_045717216.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3320271 3321041 . + . ID=gene-CCO40_RS16070;Name=CCO40_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16070;old_locus_tag=CCO40_16070 NZ_CP075116.1 Protein Homology CDS 3320271 3321041 . + 0 ID=cds-WP_001172802.1;Parent=gene-CCO40_RS16070;Dbxref=GenBank:WP_001172802.1;Name=WP_001172802.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459500.1;locus_tag=CCO40_RS16070;product=SDR family oxidoreductase;protein_id=WP_001172802.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3321101 3321955 . + . ID=gene-CCO40_RS16075;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=CCO40_RS16075;old_locus_tag=CCO40_16075 NZ_CP075116.1 Protein Homology CDS 3321101 3321955 . + 0 ID=cds-WP_000116058.1;Parent=gene-CCO40_RS16075;Dbxref=GenBank:WP_000116058.1;Name=WP_000116058.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459499.1;locus_tag=CCO40_RS16075;product=chaperedoxin;protein_id=WP_000116058.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3322041 3322820 . - . ID=gene-CCO40_RS16080;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=CCO40_RS16080;old_locus_tag=CCO40_16080 NZ_CP075116.1 Protein Homology CDS 3322041 3322820 . - 0 ID=cds-WP_001002130.1;Parent=gene-CCO40_RS16080;Dbxref=GenBank:WP_001002130.1;Name=WP_001002130.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459498.1;locus_tag=CCO40_RS16080;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_001002130.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3322807 3323484 . - . ID=gene-CCO40_RS16085;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=CCO40_RS16085;old_locus_tag=CCO40_16085 NZ_CP075116.1 Protein Homology CDS 3322807 3323484 . - 0 ID=cds-WP_000140195.1;Parent=gene-CCO40_RS16085;Dbxref=GenBank:WP_000140195.1;Name=WP_000140195.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=CCO40_RS16085;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_000140195.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3323631 3324548 . + . ID=gene-CCO40_RS16090;Name=CCO40_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16090;old_locus_tag=CCO40_16090 NZ_CP075116.1 Protein Homology CDS 3323631 3324548 . + 0 ID=cds-WP_000906146.1;Parent=gene-CCO40_RS16090;Dbxref=GenBank:WP_000906146.1;Name=WP_000906146.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=CCO40_RS16090;product=SPFH domain-containing protein;protein_id=WP_000906146.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3324545 3324997 . + . ID=gene-CCO40_RS16095;Name=CCO40_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16095;old_locus_tag=CCO40_16095 NZ_CP075116.1 Protein Homology CDS 3324545 3324997 . + 0 ID=cds-WP_000561177.1;Parent=gene-CCO40_RS16095;Dbxref=GenBank:WP_000561177.1;Name=WP_000561177.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459495.1;locus_tag=CCO40_RS16095;product=NfeD family protein;protein_id=WP_000561177.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3324998 3325414 . - . ID=gene-CCO40_RS16100;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=CCO40_RS16100;old_locus_tag=CCO40_16100 NZ_CP075116.1 Protein Homology CDS 3324998 3325414 . - 0 ID=cds-WP_001026760.1;Parent=gene-CCO40_RS16100;Dbxref=GenBank:WP_001026760.1;Name=WP_001026760.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459494.1;locus_tag=CCO40_RS16100;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026760.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3325524 3328025 . + . ID=gene-CCO40_RS16105;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=CCO40_RS16105;old_locus_tag=CCO40_16105 NZ_CP075116.1 Protein Homology CDS 3325524 3328025 . + 0 ID=cds-WP_080176739.1;Parent=gene-CCO40_RS16105;Dbxref=GenBank:WP_080176739.1;Name=WP_080176739.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=CCO40_RS16105;product=copper-exporting P-type ATPase CopA;protein_id=WP_080176739.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3328179 3329006 . + . ID=gene-CCO40_RS16110;Name=CCO40_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16110;old_locus_tag=CCO40_16110 NZ_CP075116.1 Protein Homology CDS 3328179 3329006 . + 0 ID=cds-WP_000488549.1;Parent=gene-CCO40_RS16110;Dbxref=GenBank:WP_000488549.1;Name=WP_000488549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459492.1;locus_tag=CCO40_RS16110;product=lysozyme inhibitor LprI family protein;protein_id=WP_000488549.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3329092 3329886 . + . ID=gene-CCO40_RS16115;Name=CCO40_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16115;old_locus_tag=CCO40_16115 NZ_CP075116.1 Protein Homology CDS 3329092 3329886 . + 0 ID=cds-WP_000421861.1;Parent=gene-CCO40_RS16115;Dbxref=GenBank:WP_000421861.1;Name=WP_000421861.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459491.1;locus_tag=CCO40_RS16115;product=TraB/GumN family protein;protein_id=WP_000421861.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3330088 3330567 . + . ID=gene-CCO40_RS16120;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=CCO40_RS16120;old_locus_tag=CCO40_16120 NZ_CP075116.1 Protein Homology CDS 3330088 3330567 . + 0 ID=cds-WP_000186618.1;Parent=gene-CCO40_RS16120;Dbxref=GenBank:WP_000186618.1;Name=WP_000186618.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=CCO40_RS16120;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186618.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3330684 3332336 . - . ID=gene-CCO40_RS16125;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=CCO40_RS16125;old_locus_tag=CCO40_16125 NZ_CP075116.1 Protein Homology CDS 3330684 3332336 . - 0 ID=cds-WP_000670399.1;Parent=gene-CCO40_RS16125;Dbxref=GenBank:WP_000670399.1;Name=WP_000670399.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=CCO40_RS16125;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_000670399.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3332509 3333729 . + . ID=gene-CCO40_RS16130;Name=CCO40_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16130;old_locus_tag=CCO40_16130 NZ_CP075116.1 Protein Homology CDS 3332509 3333729 . + 0 ID=cds-WP_001251593.1;Parent=gene-CCO40_RS16130;Dbxref=GenBank:WP_001251593.1;Name=WP_001251593.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=CCO40_RS16130;product=MFS transporter;protein_id=WP_001251593.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3333944 3335620 . + . ID=gene-CCO40_RS16135;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=CCO40_RS16135;old_locus_tag=CCO40_16135 NZ_CP075116.1 Protein Homology CDS 3333944 3335620 . + 0 ID=cds-WP_000546209.1;Parent=gene-CCO40_RS16135;Dbxref=GenBank:WP_000546209.1;Name=WP_000546209.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459487.1;locus_tag=CCO40_RS16135;product=YbaL family putative K(+) efflux transporter;protein_id=WP_000546209.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3335669 3336973 . - . ID=gene-CCO40_RS16140;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=CCO40_RS16140;old_locus_tag=CCO40_16140 NZ_CP075116.1 Protein Homology CDS 3335669 3336973 . - 0 ID=cds-WP_000671592.1;Parent=gene-CCO40_RS16140;Dbxref=GenBank:WP_000671592.1;Name=WP_000671592.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=CCO40_RS16140;product=inosine/guanosine kinase;protein_id=WP_000671592.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3337126 3338097 . + . ID=gene-CCO40_RS16145;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=CCO40_RS16145;old_locus_tag=CCO40_16145 NZ_CP075116.1 Protein Homology CDS 3337126 3338097 . + 0 ID=cds-WP_080219295.1;Parent=gene-CCO40_RS16145;Dbxref=GenBank:WP_080219295.1;Name=WP_080219295.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459485.1;locus_tag=CCO40_RS16145;product=acetyl esterase;protein_id=WP_080219295.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3338094 3339056 . - . ID=gene-CCO40_RS16150;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=CCO40_RS16150;old_locus_tag=CCO40_16150 NZ_CP075116.1 Protein Homology CDS 3338094 3339056 . - 0 ID=cds-WP_001250078.1;Parent=gene-CCO40_RS16150;Dbxref=GenBank:WP_001250078.1;Name=WP_001250078.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=protoporphyrin ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459484.1;locus_tag=CCO40_RS16150;product=ferrochelatase;protein_id=WP_001250078.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3339285 3339929 . - . ID=gene-CCO40_RS16155;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=CCO40_RS16155;old_locus_tag=CCO40_16155 NZ_CP075116.1 Protein Homology CDS 3339285 3339929 . - 0 ID=cds-WP_094889128.1;Parent=gene-CCO40_RS16155;Dbxref=GenBank:WP_094889128.1;Name=WP_094889128.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=AMP kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=CCO40_RS16155;product=adenylate kinase;protein_id=WP_094889128.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3340171 3342045 . - . ID=gene-CCO40_RS16160;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=CCO40_RS16160;old_locus_tag=CCO40_16160 NZ_CP075116.1 Protein Homology CDS 3340171 3342045 . - 0 ID=cds-WP_001523272.1;Parent=gene-CCO40_RS16160;Dbxref=GenBank:WP_001523272.1;Name=WP_001523272.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=CCO40_RS16160;product=molecular chaperone HtpG;protein_id=WP_001523272.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3342156 3342761 . - . ID=gene-CCO40_RS16165;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=CCO40_RS16165;old_locus_tag=CCO40_16165 NZ_CP075116.1 Protein Homology CDS 3342156 3342761 . - 0 ID=cds-WP_001195023.1;Parent=gene-CCO40_RS16165;Dbxref=GenBank:WP_001195023.1;Name=WP_001195023.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459481.1;locus_tag=CCO40_RS16165;product=recombination mediator RecR;protein_id=WP_001195023.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3342761 3343090 . - . ID=gene-CCO40_RS16170;Name=CCO40_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16170;old_locus_tag=CCO40_16170 NZ_CP075116.1 Protein Homology CDS 3342761 3343090 . - 0 ID=cds-WP_000467098.1;Parent=gene-CCO40_RS16170;Dbxref=GenBank:WP_000467098.1;Name=WP_000467098.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=CCO40_RS16170;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3343136 3345064 . - . ID=gene-CCO40_RS16175;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=CCO40_RS16175;old_locus_tag=CCO40_16175 NZ_CP075116.1 Protein Homology CDS 3343136 3345064 . - 0 ID=cds-WP_000121967.1;Parent=gene-CCO40_RS16175;Dbxref=GenBank:WP_000121967.1;Name=WP_000121967.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=CCO40_RS16175;product=DNA polymerase III subunit gamma/tau;protein_id=WP_000121967.1;transl_table=11 NZ_CP075116.1 cmsearch sequence_feature 3343739 3343803 . - . ID=id-CCO40_RS16175;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00382,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS16175 NZ_CP075116.1 RefSeq gene 3345178 3345729 . - . ID=gene-CCO40_RS16180;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=CCO40_RS16180;old_locus_tag=CCO40_16180 NZ_CP075116.1 Protein Homology CDS 3345178 3345729 . - 0 ID=cds-WP_000127350.1;Parent=gene-CCO40_RS16180;Dbxref=GenBank:WP_000127350.1;Name=WP_000127350.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=CCO40_RS16180;product=adenine phosphoribosyltransferase;protein_id=WP_000127350.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3345882 3346259 . - . ID=gene-CCO40_RS16185;Name=CCO40_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16185;old_locus_tag=CCO40_16185 NZ_CP075116.1 Protein Homology CDS 3345882 3346259 . - 0 ID=cds-WP_001189860.1;Parent=gene-CCO40_RS16185;Dbxref=GenBank:WP_001189860.1;Name=WP_001189860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459477.1;locus_tag=CCO40_RS16185;product=DUF454 family protein;protein_id=WP_001189860.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3346328 3346855 . + . ID=gene-CCO40_RS16190;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=CCO40_RS16190;old_locus_tag=CCO40_16190 NZ_CP075116.1 Protein Homology CDS 3346328 3346855 . + 0 ID=cds-WP_001519637.1;Parent=gene-CCO40_RS16190;Dbxref=GenBank:WP_001519637.1;Name=WP_001519637.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001454692.1;locus_tag=CCO40_RS16190;product=primosomal replication protein N'';protein_id=WP_001519637.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3346869 3347036 . + . ID=gene-CCO40_RS16195;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=CCO40_RS16195;old_locus_tag=CCO40_16195 NZ_CP075116.1 Protein Homology CDS 3346869 3347036 . + 0 ID=cds-WP_000051159.1;Parent=gene-CCO40_RS16195;Dbxref=GenBank:WP_000051159.1;Name=WP_000051159.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459475.1;locus_tag=CCO40_RS16195;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051159.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3347106 3348041 . + . ID=gene-CCO40_RS16200;Name=CCO40_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16200;old_locus_tag=CCO40_16200 NZ_CP075116.1 Protein Homology CDS 3347106 3348041 . + 0 ID=cds-WP_094889129.1;Parent=gene-CCO40_RS16200;Dbxref=GenBank:WP_094889129.1;Name=WP_094889129.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004536,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA nuclease activity|0004536||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=CCO40_RS16200;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_094889129.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3348083 3351445 . - . ID=gene-CCO40_RS16205;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=CCO40_RS16205;old_locus_tag=CCO40_16205 NZ_CP075116.1 Protein Homology CDS 3348083 3351445 . - 0 ID=cds-WP_000178249.1;Parent=gene-CCO40_RS16205;Dbxref=GenBank:WP_000178249.1;Name=WP_000178249.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459473.1;locus_tag=CCO40_RS16205;product=mechanosensitive channel MscK;protein_id=WP_000178249.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3351564 3352217 . - . ID=gene-CCO40_RS16210;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=CCO40_RS16210;old_locus_tag=CCO40_16210 NZ_CP075116.1 Protein Homology CDS 3351564 3352217 . - 0 ID=cds-WP_000101755.1;Parent=gene-CCO40_RS16210;Dbxref=GenBank:WP_000101755.1;Name=WP_000101755.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459472.1;locus_tag=CCO40_RS16210;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101755.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3352359 3353552 . + . ID=gene-CCO40_RS16215;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=CCO40_RS16215;old_locus_tag=CCO40_16215 NZ_CP075116.1 Protein Homology CDS 3352359 3353552 . + 0 ID=cds-WP_001039202.1;Parent=gene-CCO40_RS16215;Dbxref=GenBank:WP_001039202.1;Name=WP_001039202.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459471.1;locus_tag=CCO40_RS16215;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_001039202.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3353575 3356724 . + . ID=gene-CCO40_RS16220;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=CCO40_RS16220;old_locus_tag=CCO40_16220 NZ_CP075116.1 Protein Homology CDS 3353575 3356724 . + 0 ID=cds-WP_001132508.1;Parent=gene-CCO40_RS16220;Dbxref=GenBank:WP_001132508.1;Name=WP_001132508.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=CCO40_RS16220;product=efflux RND transporter permease AcrB;protein_id=WP_001132508.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3357220 3357594 . + . ID=gene-CCO40_RS16225;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=CCO40_RS16225;old_locus_tag=CCO40_16225 NZ_CP075116.1 Protein Homology CDS 3357220 3357594 . + 0 ID=cds-WP_000344807.1;Parent=gene-CCO40_RS16225;Dbxref=GenBank:WP_000344807.1;Name=WP_000344807.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=CCO40_RS16225;product=Hha toxicity modulator TomB;protein_id=WP_000344807.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3357622 3357840 . + . ID=gene-CCO40_RS16230;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=CCO40_RS16230;old_locus_tag=CCO40_16230 NZ_CP075116.1 Protein Homology CDS 3357622 3357840 . + 0 ID=cds-WP_001280991.1;Parent=gene-CCO40_RS16230;Dbxref=GenBank:WP_001280991.1;Name=WP_001280991.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=CCO40_RS16230;product=hemolysin expression-modulating protein Hha;protein_id=WP_001280991.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3358019 3358570 . + . ID=gene-CCO40_RS16235;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=CCO40_RS16235;old_locus_tag=CCO40_16235 NZ_CP075116.1 Protein Homology CDS 3358019 3358570 . + 0 ID=cds-WP_001278792.1;Parent=gene-CCO40_RS16235;Dbxref=GenBank:WP_001278792.1;Name=WP_001278792.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459467.1;locus_tag=CCO40_RS16235;product=maltose O-acetyltransferase;protein_id=WP_001278792.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3358687 3359157 . + . ID=gene-CCO40_RS16240;Name=CCO40_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16240;old_locus_tag=CCO40_16240 NZ_CP075116.1 Protein Homology CDS 3358687 3359157 . + 0 ID=cds-WP_000136181.1;Parent=gene-CCO40_RS16240;Dbxref=GenBank:WP_000136181.1;Name=WP_000136181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459466.1;locus_tag=CCO40_RS16240;product=YlaC family protein;protein_id=WP_000136181.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3359213 3359353 . - . ID=gene-CCO40_RS16245;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=CCO40_RS16245;old_locus_tag=CCO40_16245 NZ_CP075116.1 Protein Homology CDS 3359213 3359353 . - 0 ID=cds-WP_001197749.1;Parent=gene-CCO40_RS16245;Dbxref=GenBank:WP_001197749.1;Name=WP_001197749.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=CCO40_RS16245;product=type B 50S ribosomal protein L36;protein_id=WP_001197749.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3359359 3359619 . - . ID=gene-CCO40_RS16250;Name=CCO40_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16250;old_locus_tag=CCO40_16250 NZ_CP075116.1 Protein Homology CDS 3359359 3359619 . - 0 ID=cds-WP_000801415.1;Parent=gene-CCO40_RS16250;Dbxref=GenBank:WP_000801415.1;Name=WP_000801415.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459464.1;locus_tag=CCO40_RS16250;product=type B 50S ribosomal protein L31;protein_id=WP_000801415.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3359843 3361393 . + . ID=gene-CCO40_RS16255;Name=pdeB;gbkey=Gene;gene=pdeB;gene_biotype=protein_coding;gene_synonym=ylaB;locus_tag=CCO40_RS16255;old_locus_tag=CCO40_16255 NZ_CP075116.1 Protein Homology CDS 3359843 3361393 . + 0 ID=cds-WP_000213139.1;Parent=gene-CCO40_RS16255;Dbxref=GenBank:WP_000213139.1;Name=WP_000213139.1;Ontology_term=GO:0071111;gbkey=CDS;gene=pdeB;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459463.1;locus_tag=CCO40_RS16255;product=cyclic di-3'%2C5'-guanosine monophosphate phosphodiesterase PdeB;protein_id=WP_000213139.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3361443 3361539 . - . ID=gene-CCO40_RS16260;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=CCO40_RS16260;old_locus_tag=CCO40_16260 NZ_CP075116.1 cmsearch SRP_RNA 3361443 3361539 . - . ID=rna-CCO40_RS16260;Parent=gene-CCO40_RS16260;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00169,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS16260;product=signal recognition particle sRNA small type NZ_CP075116.1 cmsearch exon 3361443 3361539 . - . ID=exon-CCO40_RS16260-1;Parent=rna-CCO40_RS16260;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00169,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS16260;product=signal recognition particle sRNA small type NZ_CP075116.1 RefSeq gene 3361624 3362013 . + . ID=gene-CCO40_RS16265;Name=CCO40_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16265;old_locus_tag=CCO40_16265 NZ_CP075116.1 Protein Homology CDS 3361624 3362013 . + 0 ID=cds-WP_000961285.1;Parent=gene-CCO40_RS16265;Dbxref=GenBank:WP_000961285.1;Name=WP_000961285.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459462.1;locus_tag=CCO40_RS16265;product=MGMT family protein;protein_id=WP_000961285.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3362046 3362615 . - . ID=gene-CCO40_RS16270;Name=CCO40_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16270;old_locus_tag=CCO40_16270 NZ_CP075116.1 Protein Homology CDS 3362046 3362615 . - 0 ID=cds-WP_000779803.1;Parent=gene-CCO40_RS16270;Dbxref=GenBank:WP_000779803.1;Name=WP_000779803.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459461.1;locus_tag=CCO40_RS16270;product=YbaY family lipoprotein;protein_id=WP_000779803.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3362830 3363690 . + . ID=gene-CCO40_RS16275;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=CCO40_RS16275;old_locus_tag=CCO40_16275 NZ_CP075116.1 Protein Homology CDS 3362830 3363690 . + 0 ID=cds-WP_000084180.1;Parent=gene-CCO40_RS16275;Dbxref=GenBank:WP_000084180.1;Name=WP_000084180.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459460.1;locus_tag=CCO40_RS16275;product=acyl-CoA thioesterase II;protein_id=WP_000084180.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3363790 3365076 . - . ID=gene-CCO40_RS16280;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=CCO40_RS16280;old_locus_tag=CCO40_16280 NZ_CP075116.1 Protein Homology CDS 3363790 3365076 . - 0 ID=cds-WP_000684912.1;Parent=gene-CCO40_RS16280;Dbxref=GenBank:WP_000684912.1;Name=WP_000684912.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459459.1;locus_tag=CCO40_RS16280;product=ammonium transporter AmtB;protein_id=WP_000684912.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3365108 3365446 . - . ID=gene-CCO40_RS16285;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=CCO40_RS16285;old_locus_tag=CCO40_16285 NZ_CP075116.1 Protein Homology CDS 3365108 3365446 . - 0 ID=cds-WP_000780341.1;Parent=gene-CCO40_RS16285;Dbxref=GenBank:WP_000780341.1;Name=WP_000780341.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459458.1;locus_tag=CCO40_RS16285;product=P-II family nitrogen regulator;protein_id=WP_000780341.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3365659 3367440 . - . ID=gene-CCO40_RS16290;Name=CCO40_RS16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16290;old_locus_tag=CCO40_16290 NZ_CP075116.1 Protein Homology CDS 3365659 3367440 . - 0 ID=cds-WP_001256070.1;Parent=gene-CCO40_RS16290;Dbxref=GenBank:WP_001256070.1;Name=WP_001256070.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=CCO40_RS16290;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_001256070.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3367433 3369205 . - . ID=gene-CCO40_RS16295;Name=CCO40_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16295;old_locus_tag=CCO40_16295 NZ_CP075116.1 Protein Homology CDS 3367433 3369205 . - 0 ID=cds-WP_001235572.1;Parent=gene-CCO40_RS16295;Dbxref=GenBank:WP_001235572.1;Name=WP_001235572.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459456.1;locus_tag=CCO40_RS16295;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_001235572.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3369246 3369704 . - . ID=gene-CCO40_RS16300;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=CCO40_RS16300;old_locus_tag=CCO40_16300 NZ_CP075116.1 Protein Homology CDS 3369246 3369704 . - 0 ID=cds-WP_000884593.1;Parent=gene-CCO40_RS16300;Dbxref=GenBank:WP_000884593.1;Name=WP_000884593.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459455.1;locus_tag=CCO40_RS16300;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884593.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3369817 3370872 . + . ID=gene-CCO40_RS16305;Name=cdsH;gbkey=Gene;gene=cdsH;gene_biotype=protein_coding;locus_tag=CCO40_RS16305;old_locus_tag=CCO40_16305 NZ_CP075116.1 Protein Homology CDS 3369817 3370872 . + 0 ID=cds-WP_000987846.1;Parent=gene-CCO40_RS16305;Dbxref=GenBank:WP_000987846.1;Name=WP_000987846.1;gbkey=CDS;gene=cdsH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459454.1;locus_tag=CCO40_RS16305;product=cysteine desulfhydrase;protein_id=WP_000987846.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3370922 3371740 . - . ID=gene-CCO40_RS16310;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=CCO40_RS16310;old_locus_tag=CCO40_16310 NZ_CP075116.1 Protein Homology CDS 3370922 3371740 . - 0 ID=cds-WP_000113030.1;Parent=gene-CCO40_RS16310;Dbxref=GenBank:WP_000113030.1;Name=WP_000113030.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=CCO40_RS16310;product=HMP-PP phosphatase;protein_id=WP_000113030.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3371841 3373541 . + . ID=gene-CCO40_RS16315;Name=CCO40_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16315;old_locus_tag=CCO40_16315 NZ_CP075116.1 Protein Homology CDS 3371841 3373541 . + 0 ID=cds-WP_001238163.1;Parent=gene-CCO40_RS16315;Dbxref=GenBank:WP_001238163.1;Name=WP_001238163.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459452.1;locus_tag=CCO40_RS16315;product=SgrR family transcriptional regulator;protein_id=WP_001238163.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3373606 3374301 . + . ID=gene-CCO40_RS16320;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=CCO40_RS16320;old_locus_tag=CCO40_16320 NZ_CP075116.1 Protein Homology CDS 3373606 3374301 . + 0 ID=cds-WP_000817201.1;Parent=gene-CCO40_RS16320;Dbxref=GenBank:WP_000817201.1;Name=WP_000817201.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459451.1;locus_tag=CCO40_RS16320;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_000817201.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3374407 3374805 . - . ID=gene-CCO40_RS16325;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=CCO40_RS16325;old_locus_tag=CCO40_16325 NZ_CP075116.1 Protein Homology CDS 3374407 3374805 . - 0 ID=cds-WP_001194543.1;Parent=gene-CCO40_RS16325;Dbxref=GenBank:WP_001194543.1;Name=WP_001194543.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459450.1;locus_tag=CCO40_RS16325;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194543.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3374909 3375283 . - . ID=gene-CCO40_RS16330;Name=CCO40_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16330;old_locus_tag=CCO40_16330 NZ_CP075116.1 Protein Homology CDS 3374909 3375283 . - 0 ID=cds-WP_000680321.1;Parent=gene-CCO40_RS16330;Dbxref=GenBank:WP_000680321.1;Name=WP_000680321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459449.1;locus_tag=CCO40_RS16330;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000680321.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3375433 3377304 . - . ID=gene-CCO40_RS16335;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=CCO40_RS16335;old_locus_tag=CCO40_16335 NZ_CP075116.1 Protein Homology CDS 3375433 3377304 . - 0 ID=cds-WP_023240096.1;Parent=gene-CCO40_RS16335;Dbxref=GenBank:WP_023240096.1;Name=WP_023240096.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459448.1;locus_tag=CCO40_RS16335;product=peptidylprolyl isomerase;protein_id=WP_023240096.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3377595 3377867 . - . ID=gene-CCO40_RS16340;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=CCO40_RS16340;old_locus_tag=CCO40_16340 NZ_CP075116.1 Protein Homology CDS 3377595 3377867 . - 0 ID=cds-WP_001043544.1;Parent=gene-CCO40_RS16340;Dbxref=GenBank:WP_001043544.1;Name=WP_001043544.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535194.1;locus_tag=CCO40_RS16340;product=nucleoid-associated protein HU-beta;protein_id=WP_001043544.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3378076 3380430 . - . ID=gene-CCO40_RS16345;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=CCO40_RS16345;old_locus_tag=CCO40_16345 NZ_CP075116.1 Protein Homology CDS 3378076 3380430 . - 0 ID=cds-WP_001067723.1;Parent=gene-CCO40_RS16345;Dbxref=GenBank:WP_001067723.1;Name=WP_001067723.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=CCO40_RS16345;product=endopeptidase La;protein_id=WP_001067723.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3380616 3381887 . - . ID=gene-CCO40_RS16350;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=CCO40_RS16350;old_locus_tag=CCO40_16350 NZ_CP075116.1 Protein Homology CDS 3380616 3381887 . - 0 ID=cds-WP_000130314.1;Parent=gene-CCO40_RS16350;Dbxref=GenBank:WP_000130314.1;Name=WP_000130314.1;Ontology_term=GO:0005524,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=CCO40_RS16350;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_000130314.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3382139 3382762 . - . ID=gene-CCO40_RS16355;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=CCO40_RS16355;old_locus_tag=CCO40_16355 NZ_CP075116.1 Protein Homology CDS 3382139 3382762 . - 0 ID=cds-WP_000122257.1;Parent=gene-CCO40_RS16355;Dbxref=GenBank:WP_000122257.1;Name=WP_000122257.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=CCO40_RS16355;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122257.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3383009 3384307 . - . ID=gene-CCO40_RS16360;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=CCO40_RS16360;old_locus_tag=CCO40_16360 NZ_CP075116.1 Protein Homology CDS 3383009 3384307 . - 0 ID=cds-WP_001198403.1;Parent=gene-CCO40_RS16360;Dbxref=GenBank:WP_001198403.1;Name=WP_001198403.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=CCO40_RS16360;product=trigger factor;protein_id=WP_001198403.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3384654 3384971 . - . ID=gene-CCO40_RS16365;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=CCO40_RS16365;old_locus_tag=CCO40_16365 NZ_CP075116.1 Protein Homology CDS 3384654 3384971 . - 0 ID=cds-WP_000973433.1;Parent=gene-CCO40_RS16365;Dbxref=GenBank:WP_000973433.1;Name=WP_000973433.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459442.1;locus_tag=CCO40_RS16365;product=transcriptional regulator BolA;protein_id=WP_000973433.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3385275 3385853 . + . ID=gene-CCO40_RS16370;Name=CCO40_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16370;old_locus_tag=CCO40_16370 NZ_CP075116.1 Protein Homology CDS 3385275 3385853 . + 0 ID=cds-WP_001537832.1;Parent=gene-CCO40_RS16370;Dbxref=GenBank:WP_001537832.1;Name=WP_001537832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=CCO40_RS16370;product=lipoprotein;protein_id=WP_001537832.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3385897 3387372 . + . ID=gene-CCO40_RS16375;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=CCO40_RS16375;old_locus_tag=CCO40_16375 NZ_CP075116.1 Protein Homology CDS 3385897 3387372 . + 0 ID=cds-WP_000098473.1;Parent=gene-CCO40_RS16375;Dbxref=GenBank:WP_000098473.1;Name=WP_000098473.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459440.1;locus_tag=CCO40_RS16375;product=muropeptide MFS transporter AmpG;protein_id=WP_000098473.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3387825 3388781 . + . ID=gene-CCO40_RS16380;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=CCO40_RS16380;old_locus_tag=CCO40_16380 NZ_CP075116.1 Protein Homology CDS 3387825 3388781 . + 0 ID=cds-WP_001239449.1;Parent=gene-CCO40_RS16380;Dbxref=GenBank:WP_001239449.1;Name=WP_001239449.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459439.1;locus_tag=CCO40_RS16380;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_001239449.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3388792 3390783 . + . ID=gene-CCO40_RS16385;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=CCO40_RS16385;old_locus_tag=CCO40_16385 NZ_CP075116.1 Protein Homology CDS 3388792 3390783 . + 0 ID=cds-WP_000467158.1;Parent=gene-CCO40_RS16385;Dbxref=GenBank:WP_000467158.1;Name=WP_000467158.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=CCO40_RS16385;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_000467158.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3390773 3391387 . + . ID=gene-CCO40_RS16390;Name=CCO40_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16390;old_locus_tag=CCO40_16390 NZ_CP075116.1 Protein Homology CDS 3390773 3391387 . + 0 ID=cds-WP_000179833.1;Parent=gene-CCO40_RS16390;Dbxref=GenBank:WP_000179833.1;Name=WP_000179833.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=CCO40_RS16390;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179833.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3391387 3391716 . + . ID=gene-CCO40_RS16395;Name=CCO40_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16395;old_locus_tag=CCO40_16395 NZ_CP075116.1 Protein Homology CDS 3391387 3391716 . + 0 ID=cds-WP_000019878.1;Parent=gene-CCO40_RS16395;Dbxref=GenBank:WP_000019878.1;Name=WP_000019878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459436.1;locus_tag=CCO40_RS16395;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019878.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3391728 3392618 . + . ID=gene-CCO40_RS16400;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=CCO40_RS16400;old_locus_tag=CCO40_16400 NZ_CP075116.1 Protein Homology CDS 3391728 3392618 . + 0 ID=cds-WP_000971352.1;Parent=gene-CCO40_RS16400;Dbxref=GenBank:WP_000971352.1;Name=WP_000971352.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459435.1;locus_tag=CCO40_RS16400;product=heme o synthase;protein_id=WP_000971352.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3392700 3394193 . - . ID=gene-CCO40_RS16405;Name=CCO40_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16405;old_locus_tag=CCO40_16405 NZ_CP075116.1 Protein Homology CDS 3392700 3394193 . - 0 ID=cds-WP_097677887.1;Parent=gene-CCO40_RS16405;Dbxref=GenBank:WP_097677887.1;Name=WP_097677887.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000595936.1;locus_tag=CCO40_RS16405;product=tetratricopeptide repeat protein;protein_id=WP_097677887.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3394205 3395716 . - . ID=gene-CCO40_RS16410;Name=CCO40_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16410;old_locus_tag=CCO40_16410 NZ_CP075116.1 Protein Homology CDS 3394205 3395716 . - 0 ID=cds-WP_000693743.1;Parent=gene-CCO40_RS16410;Dbxref=GenBank:WP_000693743.1;Name=WP_000693743.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459433.1;locus_tag=CCO40_RS16410;product=tetratricopeptide repeat protein;protein_id=WP_000693743.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3396241 3397605 . + . ID=gene-CCO40_RS16415;Name=CCO40_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16415;old_locus_tag=CCO40_16415 NZ_CP075116.1 Protein Homology CDS 3396241 3397605 . + 0 ID=cds-WP_001000938.1;Parent=gene-CCO40_RS16415;Dbxref=GenBank:WP_001000938.1;Name=WP_001000938.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507029.1;locus_tag=CCO40_RS16415;product=MFS transporter;protein_id=WP_001000938.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3397652 3398143 . - . ID=gene-CCO40_RS16420;Name=CCO40_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16420;old_locus_tag=CCO40_16420 NZ_CP075116.1 Protein Homology CDS 3397652 3398143 . - 0 ID=cds-WP_001138914.1;Parent=gene-CCO40_RS16420;Dbxref=GenBank:WP_001138914.1;Name=WP_001138914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=CCO40_RS16420;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_001138914.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3398269 3399180 . + . ID=gene-CCO40_RS16425;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=CCO40_RS16425;old_locus_tag=CCO40_16425 NZ_CP075116.1 Protein Homology CDS 3398269 3399180 . + 0 ID=cds-WP_000705816.1;Parent=gene-CCO40_RS16425;Dbxref=GenBank:WP_000705816.1;Name=WP_000705816.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459429.1;locus_tag=CCO40_RS16425;product=2-dehydropantoate 2-reductase;protein_id=WP_000705816.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3399143 3399733 . + . ID=gene-CCO40_RS16430;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=CCO40_RS16430;old_locus_tag=CCO40_16430 NZ_CP075116.1 Protein Homology CDS 3399143 3399733 . + 0 ID=cds-WP_001275807.1;Parent=gene-CCO40_RS16430;Dbxref=GenBank:WP_001275807.1;Name=WP_001275807.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459428.1;locus_tag=CCO40_RS16430;product=protein deglycase YajL;protein_id=WP_001275807.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3399742 3399824 . - . ID=gene-CCO40_RS22700;Name=CCO40_RS22700;end_range=3399824,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22700;partial=true;pseudo=true;start_range=.,3399742 NZ_CP075116.1 Protein Homology CDS 3399742 3399824 . - 0 ID=cds-CCO40_RS22700;Parent=gene-CCO40_RS22700;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3399824,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO40_RS22700;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3399742;transl_table=11 NZ_CP075116.1 RefSeq gene 3399830 3400639 . - . ID=gene-CCO40_RS16435;Name=phnX;gbkey=Gene;gene=phnX;gene_biotype=protein_coding;locus_tag=CCO40_RS16435;old_locus_tag=CCO40_16435 NZ_CP075116.1 Protein Homology CDS 3399830 3400639 . - 0 ID=cds-WP_001530701.1;Parent=gene-CCO40_RS16435;Dbxref=GenBank:WP_001530701.1;Name=WP_001530701.1;Ontology_term=GO:0019700,GO:0050194;gbkey=CDS;gene=phnX;go_function=phosphonoacetaldehyde hydrolase activity|0050194||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229535.1;locus_tag=CCO40_RS16435;product=phosphonoacetaldehyde hydrolase;protein_id=WP_001530701.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3400649 3401752 . - . ID=gene-CCO40_RS16440;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=CCO40_RS16440;old_locus_tag=CCO40_16440 NZ_CP075116.1 Protein Homology CDS 3400649 3401752 . - 0 ID=cds-WP_000203968.1;Parent=gene-CCO40_RS16440;Dbxref=GenBank:WP_000203968.1;Name=WP_000203968.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;gene=phnW;go_function=2-aminoethylphosphonate:pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459426.1;locus_tag=CCO40_RS16440;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_000203968.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3401892 3402611 . + . ID=gene-CCO40_RS16445;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=CCO40_RS16445;old_locus_tag=CCO40_16445 NZ_CP075116.1 Protein Homology CDS 3401892 3402611 . + 0 ID=cds-WP_000836268.1;Parent=gene-CCO40_RS16445;Dbxref=GenBank:WP_000836268.1;Name=WP_000836268.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=phnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459425.1;locus_tag=CCO40_RS16445;product=phosphonate utilization transcriptional regulator PhnR;protein_id=WP_000836268.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3402809 3403822 . + . ID=gene-CCO40_RS16450;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=CCO40_RS16450;old_locus_tag=CCO40_16450 NZ_CP075116.1 Protein Homology CDS 3402809 3403822 . + 0 ID=cds-WP_000778011.1;Parent=gene-CCO40_RS16450;Dbxref=GenBank:WP_000778011.1;Name=WP_000778011.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=phnS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459424.1;locus_tag=CCO40_RS16450;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_000778011.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3403828 3404937 . + . ID=gene-CCO40_RS16455;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=CCO40_RS16455;old_locus_tag=CCO40_16455 NZ_CP075116.1 Protein Homology CDS 3403828 3404937 . + 0 ID=cds-WP_000928799.1;Parent=gene-CCO40_RS16455;Dbxref=GenBank:WP_000928799.1;Name=WP_000928799.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459423.1;locus_tag=CCO40_RS16455;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WP_000928799.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3404940 3405809 . + . ID=gene-CCO40_RS16460;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=protein_coding;locus_tag=CCO40_RS16460;old_locus_tag=CCO40_16460 NZ_CP075116.1 Protein Homology CDS 3404940 3405809 . + 0 ID=cds-WP_000052714.1;Parent=gene-CCO40_RS16460;Dbxref=GenBank:WP_000052714.1;Name=WP_000052714.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnU;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052714.1;locus_tag=CCO40_RS16460;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_000052714.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3405803 3406600 . + . ID=gene-CCO40_RS16465;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=CCO40_RS16465;old_locus_tag=CCO40_16465 NZ_CP075116.1 Protein Homology CDS 3405803 3406600 . + 0 ID=cds-WP_000909793.1;Parent=gene-CCO40_RS16465;Dbxref=GenBank:WP_000909793.1;Name=WP_000909793.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnV;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=CCO40_RS16465;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WP_000909793.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3406644 3408092 . - . ID=gene-CCO40_RS16470;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=CCO40_RS16470;old_locus_tag=CCO40_16470 NZ_CP075116.1 Protein Homology CDS 3406644 3408092 . - 0 ID=cds-WP_000668650.1;Parent=gene-CCO40_RS16470;Dbxref=GenBank:WP_000668650.1;Name=WP_000668650.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=CCO40_RS16470;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_000668650.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3408302 3408544 . + . ID=gene-CCO40_RS16475;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=CCO40_RS16475;old_locus_tag=CCO40_16475 NZ_CP075116.1 Protein Homology CDS 3408302 3408544 . + 0 ID=cds-WP_001124944.1;Parent=gene-CCO40_RS16475;Dbxref=GenBank:WP_001124944.1;Name=WP_001124944.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459419.1;locus_tag=CCO40_RS16475;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124944.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3408545 3409444 . + . ID=gene-CCO40_RS16480;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=CCO40_RS16480;old_locus_tag=CCO40_16480 NZ_CP075116.1 Protein Homology CDS 3408545 3409444 . + 0 ID=cds-WP_000348076.1;Parent=gene-CCO40_RS16480;Dbxref=GenBank:WP_000348076.1;Name=WP_000348076.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459418.1;locus_tag=CCO40_RS16480;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000348076.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3409468 3411330 . + . ID=gene-CCO40_RS16485;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=CCO40_RS16485;old_locus_tag=CCO40_16485 NZ_CP075116.1 Protein Homology CDS 3409468 3411330 . + 0 ID=cds-WP_000006777.1;Parent=gene-CCO40_RS16485;Dbxref=GenBank:WP_000006777.1;Name=WP_000006777.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459417.1;locus_tag=CCO40_RS16485;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_000006777.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3411387 3412361 . + . ID=gene-CCO40_RS16490;Name=CCO40_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16490;old_locus_tag=CCO40_16490 NZ_CP075116.1 Protein Homology CDS 3411387 3412361 . + 0 ID=cds-WP_001199874.1;Parent=gene-CCO40_RS16490;Dbxref=GenBank:WP_001199874.1;Name=WP_001199874.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459416.1;locus_tag=CCO40_RS16490;product=aldo/keto reductase;protein_id=WP_001199874.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3412369 3412460 . + . ID=gene-CCO40_RS22705;Name=CCO40_RS22705;end_range=3412460,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22705;partial=true;pseudo=true;start_range=.,3412369 NZ_CP075116.1 Protein Homology CDS 3412369 3412460 . + 0 ID=cds-CCO40_RS22705;Parent=gene-CCO40_RS22705;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3412460,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO40_RS22705;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3412369;transl_table=11 NZ_CP075116.1 RefSeq gene 3412465 3412980 . - . ID=gene-CCO40_RS16495;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=CCO40_RS16495;old_locus_tag=CCO40_16495 NZ_CP075116.1 Protein Homology CDS 3412465 3412980 . - 0 ID=cds-WP_000154063.1;Parent=gene-CCO40_RS16495;Dbxref=GenBank:WP_000154063.1;Name=WP_000154063.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459415.1;locus_tag=CCO40_RS16495;product=phosphatidylglycerophosphatase A;protein_id=WP_000154063.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3412958 3413938 . - . ID=gene-CCO40_RS16500;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=CCO40_RS16500;old_locus_tag=CCO40_16500 NZ_CP075116.1 Protein Homology CDS 3412958 3413938 . - 0 ID=cds-WP_000742083.1;Parent=gene-CCO40_RS16500;Dbxref=GenBank:WP_000742083.1;Name=WP_000742083.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308497.1;locus_tag=CCO40_RS16500;product=thiamine-phosphate kinase;protein_id=WP_000742083.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3414017 3414436 . - . ID=gene-CCO40_RS16505;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=CCO40_RS16505;old_locus_tag=CCO40_16505 NZ_CP075116.1 Protein Homology CDS 3414017 3414436 . - 0 ID=cds-WP_000801129.1;Parent=gene-CCO40_RS16505;Dbxref=GenBank:WP_000801129.1;Name=WP_000801129.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=CCO40_RS16505;product=transcription antitermination factor NusB;protein_id=WP_000801129.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3414457 3414927 . - . ID=gene-CCO40_RS16510;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=CCO40_RS16510;old_locus_tag=CCO40_16510 NZ_CP075116.1 Protein Homology CDS 3414457 3414927 . - 0 ID=cds-WP_001021373.1;Parent=gene-CCO40_RS16510;Dbxref=GenBank:WP_001021373.1;Name=WP_001021373.1;Ontology_term=GO:0009231,GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=CCO40_RS16510;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021373.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3415016 3416119 . - . ID=gene-CCO40_RS16515;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=CCO40_RS16515;old_locus_tag=CCO40_16515 NZ_CP075116.1 Protein Homology CDS 3415016 3416119 . - 0 ID=cds-WP_001150216.1;Parent=gene-CCO40_RS16515;Dbxref=GenBank:WP_001150216.1;Name=WP_001150216.1;Ontology_term=GO:0009231,GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459411.1;locus_tag=CCO40_RS16515;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_001150216.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3416123 3416572 . - . ID=gene-CCO40_RS16520;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=CCO40_RS16520;old_locus_tag=CCO40_16520 NZ_CP075116.1 Protein Homology CDS 3416123 3416572 . - 0 ID=cds-WP_000543533.1;Parent=gene-CCO40_RS16520;Dbxref=GenBank:WP_000543533.1;Name=WP_000543533.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=CCO40_RS16520;product=transcriptional regulator NrdR;protein_id=WP_000543533.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3416724 3417263 . + . ID=gene-CCO40_RS16525;Name=CCO40_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16525;old_locus_tag=CCO40_16525 NZ_CP075116.1 Protein Homology CDS 3416724 3417263 . + 0 ID=cds-WP_000198481.1;Parent=gene-CCO40_RS16525;Dbxref=GenBank:WP_000198481.1;Name=WP_000198481.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459409.1;locus_tag=CCO40_RS16525;product=SadB/YajI family lipoprotein;protein_id=WP_000198481.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3417563 3418426 . + . ID=gene-CCO40_RS16530;Name=CCO40_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16530;old_locus_tag=CCO40_16530 NZ_CP075116.1 Protein Homology CDS 3417563 3418426 . + 0 ID=cds-WP_000752021.1;Parent=gene-CCO40_RS16530;Dbxref=GenBank:WP_000752021.1;Name=WP_000752021.1;Ontology_term=GO:0015858,GO:0015471,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside-specific channel forming porin activity|0015471||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459408.1;locus_tag=CCO40_RS16530;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_000752021.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3418510 3418617 . - . ID=gene-CCO40_RS22640;Name=CCO40_RS22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22640;old_locus_tag=CCO40_16535 NZ_CP075116.1 Protein Homology CDS 3418510 3418617 . - 0 ID=cds-WP_000176312.1;Parent=gene-CCO40_RS22640;Dbxref=GenBank:WP_000176312.1;Name=WP_000176312.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025308.8;locus_tag=CCO40_RS22640;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000176312.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3419055 3419402 . - . ID=gene-CCO40_RS16540;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=CCO40_RS16540;old_locus_tag=CCO40_16540 NZ_CP075116.1 Protein Homology CDS 3419055 3419402 . - 0 ID=cds-WP_000974818.1;Parent=gene-CCO40_RS16540;Dbxref=GenBank:WP_000974818.1;Name=WP_000974818.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459406.1;locus_tag=CCO40_RS16540;product=HNH nuclease YajD;protein_id=WP_000974818.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3419572 3420264 . - . ID=gene-CCO40_RS16545;Name=CCO40_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16545;old_locus_tag=CCO40_16545 NZ_CP075116.1 Protein Homology CDS 3419572 3420264 . - 0 ID=cds-WP_000198316.1;Parent=gene-CCO40_RS16545;Dbxref=GenBank:WP_000198316.1;Name=WP_000198316.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459405.1;locus_tag=CCO40_RS16545;product=helix-turn-helix transcriptional regulator;protein_id=WP_000198316.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3420290 3420655 . - . ID=gene-CCO40_RS16550;Name=CCO40_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16550;old_locus_tag=CCO40_16550 NZ_CP075116.1 Protein Homology CDS 3420290 3420655 . - 0 ID=cds-WP_000793037.1;Parent=gene-CCO40_RS16550;Dbxref=GenBank:WP_000793037.1;Name=WP_000793037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459404.1;locus_tag=CCO40_RS16550;product=VOC family protein;protein_id=WP_000793037.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3420800 3421771 . - . ID=gene-CCO40_RS16555;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=CCO40_RS16555;old_locus_tag=CCO40_16555 NZ_CP075116.1 Protein Homology CDS 3420800 3421771 . - 0 ID=cds-WP_000046629.1;Parent=gene-CCO40_RS16555;Dbxref=GenBank:WP_000046629.1;Name=WP_000046629.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459403.1;locus_tag=CCO40_RS16555;product=protein translocase subunit SecF;protein_id=WP_000046629.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3421782 3423629 . - . ID=gene-CCO40_RS16560;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=CCO40_RS16560;old_locus_tag=CCO40_16560 NZ_CP075116.1 Protein Homology CDS 3421782 3423629 . - 0 ID=cds-WP_000934808.1;Parent=gene-CCO40_RS16560;Dbxref=GenBank:WP_000934808.1;Name=WP_000934808.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=CCO40_RS16560;product=protein translocase subunit SecD;protein_id=WP_000934808.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3423657 3423989 . - . ID=gene-CCO40_RS16565;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=CCO40_RS16565;old_locus_tag=CCO40_16565 NZ_CP075116.1 Protein Homology CDS 3423657 3423989 . - 0 ID=cds-WP_012904809.1;Parent=gene-CCO40_RS16565;Dbxref=GenBank:WP_012904809.1;Name=WP_012904809.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=CCO40_RS16565;product=preprotein translocase subunit YajC;protein_id=WP_012904809.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3424012 3425139 . - . ID=gene-CCO40_RS16570;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=CCO40_RS16570;old_locus_tag=CCO40_16570 NZ_CP075116.1 Protein Homology CDS 3424012 3425139 . - 0 ID=cds-WP_000667305.1;Parent=gene-CCO40_RS16570;Dbxref=GenBank:WP_000667305.1;Name=WP_000667305.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=CCO40_RS16570;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000667305.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3425335 3426399 . - . ID=gene-CCO40_RS16575;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=CCO40_RS16575;old_locus_tag=CCO40_16575 NZ_CP075116.1 Protein Homology CDS 3425335 3426399 . - 0 ID=cds-WP_001266532.1;Parent=gene-CCO40_RS16575;Dbxref=GenBank:WP_001266532.1;Name=WP_001266532.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=CCO40_RS16575;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266532.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3426493 3427074 . + . ID=gene-CCO40_RS16580;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=CCO40_RS16580;old_locus_tag=CCO40_16580 NZ_CP075116.1 Protein Homology CDS 3426493 3427074 . + 0 ID=cds-WP_001009858.1;Parent=gene-CCO40_RS16580;Dbxref=GenBank:WP_001009858.1;Name=WP_001009858.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459398.1;locus_tag=CCO40_RS16580;product=ACP phosphodiesterase;protein_id=WP_001009858.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3427284 3427886 . + . ID=gene-CCO40_RS16585;Name=CCO40_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16585;old_locus_tag=CCO40_16585 NZ_CP075116.1 Protein Homology CDS 3427284 3427886 . + 0 ID=cds-WP_000244731.1;Parent=gene-CCO40_RS16585;Dbxref=GenBank:WP_000244731.1;Name=WP_000244731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459397.1;locus_tag=CCO40_RS16585;product=peroxiredoxin;protein_id=WP_000244731.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3427958 3429775 . - . ID=gene-CCO40_RS16590;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=CCO40_RS16590;old_locus_tag=CCO40_16590 NZ_CP075116.1 Protein Homology CDS 3427958 3429775 . - 0 ID=cds-WP_079973463.1;Parent=gene-CCO40_RS16590;Dbxref=GenBank:WP_079973463.1;Name=WP_079973463.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459396.1;locus_tag=CCO40_RS16590;product=maltodextrin glucosidase;protein_id=WP_079973463.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3429937 3431307 . - . ID=gene-CCO40_RS16595;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=CCO40_RS16595;old_locus_tag=CCO40_16595 NZ_CP075116.1 Protein Homology CDS 3429937 3431307 . - 0 ID=cds-WP_000445556.1;Parent=gene-CCO40_RS16595;Dbxref=GenBank:WP_000445556.1;Name=WP_000445556.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=CCO40_RS16595;product=proline-specific permease ProY;protein_id=WP_000445556.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3431382 3432701 . - . ID=gene-CCO40_RS16600;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=CCO40_RS16600;old_locus_tag=CCO40_16600 NZ_CP075116.1 Protein Homology CDS 3431382 3432701 . - 0 ID=cds-WP_000149625.1;Parent=gene-CCO40_RS16600;Dbxref=GenBank:WP_000149625.1;Name=WP_000149625.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459394.1;locus_tag=CCO40_RS16600;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_000149625.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3433110 3434405 . - . ID=gene-CCO40_RS16605;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=CCO40_RS16605;old_locus_tag=CCO40_16605 NZ_CP075116.1 Protein Homology CDS 3433110 3434405 . - 0 ID=cds-WP_000893645.1;Parent=gene-CCO40_RS16605;Dbxref=GenBank:WP_000893645.1;Name=WP_000893645.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459393.1;locus_tag=CCO40_RS16605;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_000893645.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3434475 3435164 . - . ID=gene-CCO40_RS16610;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=CCO40_RS16610;old_locus_tag=CCO40_16610 NZ_CP075116.1 Protein Homology CDS 3434475 3435164 . - 0 ID=cds-WP_000113921.1;Parent=gene-CCO40_RS16610;Dbxref=GenBank:WP_000113921.1;Name=WP_000113921.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=CCO40_RS16610;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113921.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3435379 3436581 . + . ID=gene-CCO40_RS16615;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=CCO40_RS16615;old_locus_tag=CCO40_16615 NZ_CP075116.1 Protein Homology CDS 3435379 3436581 . + 0 ID=cds-WP_001221253.1;Parent=gene-CCO40_RS16615;Dbxref=GenBank:WP_001221253.1;Name=WP_001221253.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=CCO40_RS16615;product=exonuclease subunit SbcD;protein_id=WP_001221253.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3436578 3439718 . + . ID=gene-CCO40_RS16620;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=CCO40_RS16620;old_locus_tag=CCO40_16620 NZ_CP075116.1 Protein Homology CDS 3436578 3439718 . + 0 ID=cds-WP_001531368.1;Parent=gene-CCO40_RS16620;Dbxref=GenBank:WP_001531368.1;Name=WP_001531368.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459390.1;locus_tag=CCO40_RS16620;product=exonuclease subunit SbcC;protein_id=WP_001531368.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3439891 3441063 . + . ID=gene-CCO40_RS16625;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=CCO40_RS16625;old_locus_tag=CCO40_16625 NZ_CP075116.1 Protein Homology CDS 3439891 3441063 . + 0 ID=cds-WP_000755622.1;Parent=gene-CCO40_RS16625;Dbxref=GenBank:WP_000755622.1;Name=WP_000755622.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=CCO40_RS16625;product=MFS transporter AraJ;protein_id=WP_000755622.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3441085 3441993 . - . ID=gene-CCO40_RS16630;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=CCO40_RS16630;old_locus_tag=CCO40_16630 NZ_CP075116.1 Protein Homology CDS 3441085 3441993 . - 0 ID=cds-WP_001219265.1;Parent=gene-CCO40_RS16630;Dbxref=GenBank:WP_001219265.1;Name=WP_001219265.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459388.1;locus_tag=CCO40_RS16630;product=fructokinase;protein_id=WP_001219265.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3442119 3443030 . + . ID=gene-CCO40_RS16635;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=CCO40_RS16635;old_locus_tag=CCO40_16635 NZ_CP075116.1 Protein Homology CDS 3442119 3443030 . + 0 ID=cds-WP_000964305.1;Parent=gene-CCO40_RS16635;Dbxref=GenBank:WP_000964305.1;Name=WP_000964305.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=CCO40_RS16635;product=recombination-associated protein RdgC;protein_id=WP_000964305.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3443068 3443352 . - . ID=gene-CCO40_RS16640;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=CCO40_RS16640;old_locus_tag=CCO40_16640 NZ_CP075116.1 Protein Homology CDS 3443068 3443352 . - 0 ID=cds-WP_023250420.1;Parent=gene-CCO40_RS16640;Dbxref=GenBank:WP_023250420.1;Name=WP_023250420.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459386.1;locus_tag=CCO40_RS16640;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_023250420.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3443423 3444100 . - . ID=gene-CCO40_RS16645;Name=CCO40_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16645;old_locus_tag=CCO40_16645 NZ_CP075116.1 Protein Homology CDS 3443423 3444100 . - 0 ID=cds-WP_001276437.1;Parent=gene-CCO40_RS16645;Dbxref=GenBank:WP_001276437.1;Name=WP_001276437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459385.1;locus_tag=CCO40_RS16645;product=AroM family protein;protein_id=WP_001276437.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3444351 3444542 . - . ID=gene-CCO40_RS16650;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=CCO40_RS16650;old_locus_tag=CCO40_16650 NZ_CP075116.1 Protein Homology CDS 3444351 3444542 . - 0 ID=cds-WP_001143161.1;Parent=gene-CCO40_RS16650;Dbxref=GenBank:WP_001143161.1;Name=WP_001143161.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=CCO40_RS16650;product=protein YaiA;protein_id=WP_001143161.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3444569 3445114 . - . ID=gene-CCO40_RS16655;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=CCO40_RS16655;old_locus_tag=CCO40_16655 NZ_CP075116.1 Protein Homology CDS 3444569 3445114 . - 0 ID=cds-WP_000983564.1;Parent=gene-CCO40_RS16655;Dbxref=GenBank:WP_000983564.1;Name=WP_000983564.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459383.1;locus_tag=CCO40_RS16655;product=shikimate kinase AroL;protein_id=WP_000983564.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3445299 3445754 . - . ID=gene-CCO40_RS16660;Name=CCO40_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16660;old_locus_tag=CCO40_16660 NZ_CP075116.1 Protein Homology CDS 3445299 3445754 . - 0 ID=cds-WP_000158137.1;Parent=gene-CCO40_RS16660;Dbxref=GenBank:WP_000158137.1;Name=WP_000158137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459382.1;locus_tag=CCO40_RS16660;product=YaiI/YqxD family protein;protein_id=WP_000158137.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3445894 3446703 . + . ID=gene-CCO40_RS16665;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=CCO40_RS16665;old_locus_tag=CCO40_16665 NZ_CP075116.1 Protein Homology CDS 3445894 3446703 . + 0 ID=cds-WP_000412193.1;Parent=gene-CCO40_RS16665;Dbxref=GenBank:WP_000412193.1;Name=WP_000412193.1;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459381.1;locus_tag=CCO40_RS16665;product=pyrroline-5-carboxylate reductase;protein_id=WP_000412193.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3446718 3447830 . - . ID=gene-CCO40_RS16670;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=CCO40_RS16670;old_locus_tag=CCO40_16670 NZ_CP075116.1 Protein Homology CDS 3446718 3447830 . - 0 ID=cds-WP_063808892.1;Parent=gene-CCO40_RS16670;Dbxref=GenBank:WP_063808892.1;Name=WP_063808892.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459380.1;locus_tag=CCO40_RS16670;product=diguanylate cyclase AdrA;protein_id=WP_063808892.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3447922 3448242 . - . ID=gene-CCO40_RS16675;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=CCO40_RS16675;old_locus_tag=CCO40_16675 NZ_CP075116.1 Protein Homology CDS 3447922 3448242 . - 0 ID=cds-WP_000705166.1;Parent=gene-CCO40_RS16675;Dbxref=GenBank:WP_000705166.1;Name=WP_000705166.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459379.1;locus_tag=CCO40_RS16675;product=phosphate starvation-inducible protein PsiF;protein_id=WP_000705166.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3448594 3448854 . - . ID=gene-CCO40_RS16680;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=CCO40_RS16680;old_locus_tag=CCO40_16680 NZ_CP075116.1 Protein Homology CDS 3448594 3448854 . - 0 ID=cds-WP_001518423.1;Parent=gene-CCO40_RS16680;Dbxref=GenBank:WP_001518423.1;Name=WP_001518423.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748986.1;locus_tag=CCO40_RS16680;product=anti-adapter protein IraP;protein_id=WP_001518423.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3449151 3450362 . - . ID=gene-CCO40_RS16685;Name=CCO40_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16685;old_locus_tag=CCO40_16685 NZ_CP075116.1 Protein Homology CDS 3449151 3450362 . - 0 ID=cds-WP_000446768.1;Parent=gene-CCO40_RS16685;Dbxref=GenBank:WP_000446768.1;Name=WP_000446768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=CCO40_RS16685;product=multidrug efflux MFS transporter;protein_id=WP_000446768.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3450531 3451244 . - . ID=gene-CCO40_RS16690;Name=CCO40_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16690;old_locus_tag=CCO40_16690 NZ_CP075116.1 Protein Homology CDS 3450531 3451244 . - 0 ID=cds-WP_000480791.1;Parent=gene-CCO40_RS16690;Dbxref=GenBank:WP_000480791.1;Name=WP_000480791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459376.1;locus_tag=CCO40_RS16690;product=extensin-like domain-containing protein;protein_id=WP_000480791.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3451322 3452416 . + . ID=gene-CCO40_RS16695;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=CCO40_RS16695;old_locus_tag=CCO40_16695 NZ_CP075116.1 Protein Homology CDS 3451322 3452416 . + 0 ID=cds-WP_001096592.1;Parent=gene-CCO40_RS16695;Dbxref=GenBank:WP_001096592.1;Name=WP_001096592.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459375.1;locus_tag=CCO40_RS16695;product=D-alanine--D-alanine ligase;protein_id=WP_001096592.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3452442 3452657 . - . ID=gene-CCO40_RS16700;Name=CCO40_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16700;old_locus_tag=CCO40_16700 NZ_CP075116.1 Protein Homology CDS 3452442 3452657 . - 0 ID=cds-WP_001239240.1;Parent=gene-CCO40_RS16700;Dbxref=GenBank:WP_001239240.1;Name=WP_001239240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459374.1;locus_tag=CCO40_RS16700;product=DUF2754 family protein;protein_id=WP_001239240.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3452925 3453233 . + . ID=gene-CCO40_RS16705;Name=CCO40_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16705;old_locus_tag=CCO40_16705 NZ_CP075116.1 Protein Homology CDS 3452925 3453233 . + 0 ID=cds-WP_000763139.1;Parent=gene-CCO40_RS16705;Dbxref=GenBank:WP_000763139.1;Name=WP_000763139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459373.1;locus_tag=CCO40_RS16705;product=YaiY family protein;protein_id=WP_000763139.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3453271 3454365 . - . ID=gene-CCO40_RS16710;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=CCO40_RS16710;old_locus_tag=CCO40_16710 NZ_CP075116.1 Protein Homology CDS 3453271 3454365 . - 0 ID=cds-WP_001271416.1;Parent=gene-CCO40_RS16710;Dbxref=GenBank:WP_001271416.1;Name=WP_001271416.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459372.1;locus_tag=CCO40_RS16710;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_001271416.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3454380 3455600 . - . ID=gene-CCO40_RS16715;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=CCO40_RS16715;old_locus_tag=CCO40_16715 NZ_CP075116.1 Protein Homology CDS 3454380 3455600 . - 0 ID=cds-WP_000477024.1;Parent=gene-CCO40_RS16715;Dbxref=GenBank:WP_000477024.1;Name=WP_000477024.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459371.1;locus_tag=CCO40_RS16715;product=peptide antibiotic transporter SbmA;protein_id=WP_000477024.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3455947 3457104 . + . ID=gene-CCO40_RS16720;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=CCO40_RS16720;old_locus_tag=CCO40_16720 NZ_CP075116.1 Protein Homology CDS 3455947 3457104 . + 0 ID=cds-WP_000830785.1;Parent=gene-CCO40_RS16720;Dbxref=GenBank:WP_000830785.1;Name=WP_000830785.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=CCO40_RS16720;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_000830785.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3457149 3457772 . - . ID=gene-CCO40_RS16725;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=CCO40_RS16725;old_locus_tag=CCO40_16725 NZ_CP075116.1 Protein Homology CDS 3457149 3457772 . - 0 ID=cds-WP_000950242.1;Parent=gene-CCO40_RS16725;Dbxref=GenBank:WP_000950242.1;Name=WP_000950242.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459369.1;locus_tag=CCO40_RS16725;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_000950242.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3457858 3460803 . - . ID=gene-CCO40_RS16730;Name=CCO40_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16730;old_locus_tag=CCO40_16730 NZ_CP075116.1 Protein Homology CDS 3457858 3460803 . - 0 ID=cds-WP_000556538.1;Parent=gene-CCO40_RS16730;Dbxref=GenBank:WP_000556538.1;Name=WP_000556538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459368.1;locus_tag=CCO40_RS16730;product=autotransporter YaiT-related protein;protein_id=WP_000556538.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3461316 3462290 . + . ID=gene-CCO40_RS16735;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=CCO40_RS16735;old_locus_tag=CCO40_16735 NZ_CP075116.1 Protein Homology CDS 3461316 3462290 . + 0 ID=cds-WP_000130724.1;Parent=gene-CCO40_RS16735;Dbxref=GenBank:WP_000130724.1;Name=WP_000130724.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459367.1;locus_tag=CCO40_RS16735;product=porphobilinogen synthase;protein_id=WP_000130724.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3462394 3464280 . - . ID=gene-CCO40_RS16740;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=CCO40_RS16740;old_locus_tag=CCO40_16740 NZ_CP075116.1 Protein Homology CDS 3462394 3464280 . - 0 ID=cds-WP_000010202.1;Parent=gene-CCO40_RS16740;Dbxref=GenBank:WP_000010202.1;Name=WP_000010202.1;Ontology_term=GO:0019543,GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;go_process=propionate catabolic process|0019543||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=CCO40_RS16740;product=propionate--CoA ligase;protein_id=WP_000010202.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3464321 3465772 . - . ID=gene-CCO40_RS16745;Name=CCO40_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16745;old_locus_tag=CCO40_16745 NZ_CP075116.1 Protein Homology CDS 3464321 3465772 . - 0 ID=cds-WP_001272698.1;Parent=gene-CCO40_RS16745;Dbxref=GenBank:WP_001272698.1;Name=WP_001272698.1;Ontology_term=GO:0019543,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate catabolic process|0019543||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459365.1;locus_tag=CCO40_RS16745;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WP_001272698.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3465810 3466979 . - . ID=gene-CCO40_RS16750;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=CCO40_RS16750;old_locus_tag=CCO40_16750 NZ_CP075116.1 Protein Homology CDS 3465810 3466979 . - 0 ID=cds-WP_000132748.1;Parent=gene-CCO40_RS16750;Dbxref=GenBank:WP_000132748.1;Name=WP_000132748.1;Ontology_term=GO:0019543,GO:0036440,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate synthase activity|0036440||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate catabolic process|0019543||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459364.1;locus_tag=CCO40_RS16750;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_000132748.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3467102 3467989 . - . ID=gene-CCO40_RS16755;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=CCO40_RS16755;old_locus_tag=CCO40_16755 NZ_CP075116.1 Protein Homology CDS 3467102 3467989 . - 0 ID=cds-WP_000052218.1;Parent=gene-CCO40_RS16755;Dbxref=GenBank:WP_000052218.1;Name=WP_000052218.1;Ontology_term=GO:0019543,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process|0019543||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459363.1;locus_tag=CCO40_RS16755;product=methylisocitrate lyase;protein_id=WP_000052218.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3468255 3469880 . + . ID=gene-CCO40_RS16760;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=CCO40_RS16760;old_locus_tag=CCO40_16760 NZ_CP075116.1 Protein Homology CDS 3468255 3469880 . + 0 ID=cds-WP_000205277.1;Parent=gene-CCO40_RS16760;Dbxref=GenBank:WP_000205277.1;Name=WP_000205277.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459362.1;locus_tag=CCO40_RS16760;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_000205277.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3470016 3470291 . - . ID=gene-CCO40_RS16765;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=CCO40_RS16765;old_locus_tag=CCO40_16765 NZ_CP075116.1 Protein Homology CDS 3470016 3470291 . - 0 ID=cds-WP_000848026.1;Parent=gene-CCO40_RS16765;Dbxref=GenBank:WP_000848026.1;Name=WP_000848026.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459361.1;locus_tag=CCO40_RS16765;product=DUF1471 family periplasmic protein YahO;protein_id=WP_000848026.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3470523 3471155 . + . ID=gene-CCO40_RS16770;Name=CCO40_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16770;old_locus_tag=CCO40_16770 NZ_CP075116.1 Protein Homology CDS 3470523 3471155 . + 0 ID=cds-WP_000433131.1;Parent=gene-CCO40_RS16770;Dbxref=GenBank:WP_000433131.1;Name=WP_000433131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459360.1;locus_tag=CCO40_RS16770;product=LysE family transporter;protein_id=WP_000433131.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3471196 3473304 . - . ID=gene-CCO40_RS16775;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=CCO40_RS16775;old_locus_tag=CCO40_16775 NZ_CP075116.1 Protein Homology CDS 3471196 3473304 . - 0 ID=cds-WP_001127733.1;Parent=gene-CCO40_RS16775;Dbxref=GenBank:WP_001127733.1;Name=WP_001127733.1;Ontology_term=GO:0015344,GO:0038023;gbkey=CDS;gene=foxA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=CCO40_RS16775;product=ferrioxamine B receptor FoxA;protein_id=WP_001127733.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3473450 3474454 . - . ID=gene-CCO40_RS16780;Name=foxR;gbkey=Gene;gene=foxR;gene_biotype=protein_coding;locus_tag=CCO40_RS16780;old_locus_tag=CCO40_16780 NZ_CP075116.1 Protein Homology CDS 3473450 3474454 . - 0 ID=cds-WP_000074605.1;Parent=gene-CCO40_RS16780;Dbxref=GenBank:WP_000074605.1;Name=WP_000074605.1;gbkey=CDS;gene=foxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459358.1;locus_tag=CCO40_RS16780;product=ferrioxamine uptake transcriptional regulator FoxR;protein_id=WP_000074605.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3474550 3474742 . - . ID=gene-CCO40_RS22535;Name=CCO40_RS22535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22535;pseudo=true NZ_CP075116.1 Protein Homology CDS 3474550 3474742 . - 0 ID=cds-CCO40_RS22535;Parent=gene-CCO40_RS22535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459357.3;locus_tag=CCO40_RS22535;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 3474661 3474846 . - . ID=gene-CCO40_RS22710;Name=CCO40_RS22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22710;old_locus_tag=CCO40_16785 NZ_CP075116.1 Protein Homology CDS 3474661 3474846 . - 0 ID=cds-WP_305954967.1;Parent=gene-CCO40_RS22710;Dbxref=GenBank:WP_305954967.1;Name=WP_305954967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022085.7;locus_tag=CCO40_RS22710;product=DUF2474 domain-containing protein;protein_id=WP_305954967.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3474792 3475802 . - . ID=gene-CCO40_RS16790;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=CCO40_RS16790;old_locus_tag=CCO40_16790 NZ_CP075116.1 Protein Homology CDS 3474792 3475802 . - 0 ID=cds-WP_000151049.1;Parent=gene-CCO40_RS16790;Dbxref=GenBank:WP_000151049.1;Name=WP_000151049.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=CCO40_RS16790;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000151049.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3475799 3477202 . - . ID=gene-CCO40_RS16795;Name=CCO40_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16795;old_locus_tag=CCO40_16795 NZ_CP075116.1 Protein Homology CDS 3475799 3477202 . - 0 ID=cds-WP_000393711.1;Parent=gene-CCO40_RS16795;Dbxref=GenBank:WP_000393711.1;Name=WP_000393711.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459355.1;locus_tag=CCO40_RS16795;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000393711.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3477319 3477420 . - . ID=gene-CCO40_RS16800;Name=ssaA;gbkey=Gene;gene=ssaA;gene_biotype=protein_coding;locus_tag=CCO40_RS16800;old_locus_tag=CCO40_16800 NZ_CP075116.1 Protein Homology CDS 3477319 3477420 . - 0 ID=cds-WP_000934834.1;Parent=gene-CCO40_RS16800;Dbxref=GenBank:WP_000934834.1;Name=WP_000934834.1;gbkey=CDS;gene=ssaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=CCO40_RS16800;product=small effector SsaA;protein_id=WP_000934834.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3477697 3480669 . - . ID=gene-CCO40_RS16805;Name=CCO40_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16805;old_locus_tag=CCO40_16805 NZ_CP075116.1 Protein Homology CDS 3477697 3480669 . - 0 ID=cds-WP_001531468.1;Parent=gene-CCO40_RS16805;Dbxref=GenBank:WP_001531468.1;Name=WP_001531468.1;Ontology_term=GO:0003677,GO:0016788;gbkey=CDS;go_function=DNA binding|0003677||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=CCO40_RS16805;product=type III restriction-modification system endonuclease;protein_id=WP_001531468.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3480679 3482637 . - . ID=gene-CCO40_RS16810;Name=CCO40_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16810;old_locus_tag=CCO40_16810 NZ_CP075116.1 Protein Homology CDS 3480679 3482637 . - 0 ID=cds-WP_023170964.1;Parent=gene-CCO40_RS16810;Dbxref=GenBank:WP_023170964.1;Name=WP_023170964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459352.1;locus_tag=CCO40_RS16810;product=site-specific DNA-methyltransferase;protein_id=WP_023170964.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3482826 3484079 . - . ID=gene-CCO40_RS16815;Name=CCO40_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16815;old_locus_tag=CCO40_16815 NZ_CP075116.1 Protein Homology CDS 3482826 3484079 . - 0 ID=cds-WP_000288504.1;Parent=gene-CCO40_RS16815;Dbxref=GenBank:WP_000288504.1;Name=WP_000288504.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459351.1;locus_tag=CCO40_RS16815;product=MFS transporter;protein_id=WP_000288504.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3484371 3484565 . - . ID=gene-CCO40_RS16820;Name=golB;gbkey=Gene;gene=golB;gene_biotype=protein_coding;locus_tag=CCO40_RS16820;old_locus_tag=CCO40_16820 NZ_CP075116.1 Protein Homology CDS 3484371 3484565 . - 0 ID=cds-WP_001159470.1;Parent=gene-CCO40_RS16820;Dbxref=GenBank:WP_001159470.1;Name=WP_001159470.1;gbkey=CDS;gene=golB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459350.1;locus_tag=CCO40_RS16820;product=gold resistance metallochaperone GolB;protein_id=WP_001159470.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3484643 3485107 . - . ID=gene-CCO40_RS16825;Name=golS;gbkey=Gene;gene=golS;gene_biotype=protein_coding;locus_tag=CCO40_RS16825;old_locus_tag=CCO40_16825 NZ_CP075116.1 Protein Homology CDS 3484643 3485107 . - 0 ID=cds-WP_001020583.1;Parent=gene-CCO40_RS16825;Dbxref=GenBank:WP_001020583.1;Name=WP_001020583.1;gbkey=CDS;gene=golS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459349.1;locus_tag=CCO40_RS16825;product=Au(I) sensor transcriptional regulator GolS;protein_id=WP_001020583.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3485119 3487407 . - . ID=gene-CCO40_RS16830;Name=golT;gbkey=Gene;gene=golT;gene_biotype=protein_coding;locus_tag=CCO40_RS16830;old_locus_tag=CCO40_16830 NZ_CP075116.1 Protein Homology CDS 3485119 3487407 . - 0 ID=cds-WP_000083307.1;Parent=gene-CCO40_RS16830;Dbxref=GenBank:WP_000083307.1;Name=WP_000083307.1;gbkey=CDS;gene=golT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083318.1;locus_tag=CCO40_RS16830;product=gold/copper-translocating P-type ATPase GolT;protein_id=WP_000083307.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3487684 3488910 . + . ID=gene-CCO40_RS16835;Name=mdsA;gbkey=Gene;gene=mdsA;gene_biotype=protein_coding;locus_tag=CCO40_RS16835;old_locus_tag=CCO40_16835 NZ_CP075116.1 Protein Homology CDS 3487684 3488910 . + 0 ID=cds-WP_001254864.1;Parent=gene-CCO40_RS16835;Dbxref=GenBank:WP_001254864.1;Name=WP_001254864.1;gbkey=CDS;gene=mdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=CCO40_RS16835;product=multidrug efflux RND transporter periplasmic adaptor subunit MdsA;protein_id=WP_001254864.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3488907 3492074 . + . ID=gene-CCO40_RS16840;Name=mdsB;gbkey=Gene;gene=mdsB;gene_biotype=protein_coding;locus_tag=CCO40_RS16840;old_locus_tag=CCO40_16840 NZ_CP075116.1 Protein Homology CDS 3488907 3492074 . + 0 ID=cds-WP_000673139.1;Parent=gene-CCO40_RS16840;Dbxref=GenBank:WP_000673139.1;Name=WP_000673139.1;gbkey=CDS;gene=mdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=CCO40_RS16840;product=multidrug efflux RND transporter permease subunit MdsB;protein_id=WP_000673139.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3492091 3493548 . + . ID=gene-CCO40_RS16845;Name=mdsC;gbkey=Gene;gene=mdsC;gene_biotype=protein_coding;locus_tag=CCO40_RS16845;old_locus_tag=CCO40_16845 NZ_CP075116.1 Protein Homology CDS 3492091 3493548 . + 0 ID=cds-WP_001531456.1;Parent=gene-CCO40_RS16845;Dbxref=GenBank:WP_001531456.1;Name=WP_001531456.1;gbkey=CDS;gene=mdsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521068.1;locus_tag=CCO40_RS16845;product=multidrug efflux transporter outer membrane subunit MdsC;protein_id=WP_001531456.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3493618 3493977 . - . ID=gene-CCO40_RS16850;Name=CCO40_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16850;old_locus_tag=CCO40_16850 NZ_CP075116.1 Protein Homology CDS 3493618 3493977 . - 0 ID=cds-WP_000722978.1;Parent=gene-CCO40_RS16850;Dbxref=GenBank:WP_000722978.1;Name=WP_000722978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459344.1;locus_tag=CCO40_RS16850;product=DUF4156 domain-containing protein;protein_id=WP_000722978.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3494035 3494259 . - . ID=gene-CCO40_RS16855;Name=CCO40_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16855;old_locus_tag=CCO40_16855 NZ_CP075116.1 Protein Homology CDS 3494035 3494259 . - 0 ID=cds-WP_000737126.1;Parent=gene-CCO40_RS16855;Dbxref=GenBank:WP_000737126.1;Name=WP_000737126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=CCO40_RS16855;product=hypothetical protein;protein_id=WP_000737126.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3494270 3494911 . - . ID=gene-CCO40_RS16860;Name=CCO40_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16860;old_locus_tag=CCO40_16860 NZ_CP075116.1 Protein Homology CDS 3494270 3494911 . - 0 ID=cds-WP_000610827.1;Parent=gene-CCO40_RS16860;Dbxref=GenBank:WP_000610827.1;Name=WP_000610827.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459342.1;locus_tag=CCO40_RS16860;product=helix-turn-helix transcriptional regulator;protein_id=WP_000610827.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3495055 3495579 . - . ID=gene-CCO40_RS16865;Name=CCO40_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16865;old_locus_tag=CCO40_16865 NZ_CP075116.1 Protein Homology CDS 3495055 3495579 . - 0 ID=cds-WP_000830239.1;Parent=gene-CCO40_RS16865;Dbxref=GenBank:WP_000830239.1;Name=WP_000830239.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459341.1;locus_tag=CCO40_RS16865;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_000830239.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3495979 3496467 . - . ID=gene-CCO40_RS16870;Name=CCO40_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16870;old_locus_tag=CCO40_16870 NZ_CP075116.1 Protein Homology CDS 3495979 3496467 . - 0 ID=cds-WP_000545426.1;Parent=gene-CCO40_RS16870;Dbxref=GenBank:WP_000545426.1;Name=WP_000545426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459340.1;locus_tag=CCO40_RS16870;product=hypothetical protein;protein_id=WP_000545426.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3496440 3497183 . - . ID=gene-CCO40_RS16875;Name=CCO40_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16875;old_locus_tag=CCO40_16875 NZ_CP075116.1 Protein Homology CDS 3496440 3497183 . - 0 ID=cds-WP_000081375.1;Parent=gene-CCO40_RS16875;Dbxref=GenBank:WP_000081375.1;Name=WP_000081375.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=CCO40_RS16875;product=transcriptional regulator;protein_id=WP_000081375.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3497283 3498857 . - . ID=gene-CCO40_RS16880;Name=CCO40_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16880;old_locus_tag=CCO40_16880 NZ_CP075116.1 Protein Homology CDS 3497283 3498857 . - 0 ID=cds-WP_000868300.1;Parent=gene-CCO40_RS16880;Dbxref=GenBank:WP_000868300.1;Name=WP_000868300.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459338.1;locus_tag=CCO40_RS16880;product=EAL domain-containing protein;protein_id=WP_000868300.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3499357 3499657 . - . ID=gene-CCO40_RS16885;Name=CCO40_RS16885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS16885;old_locus_tag=CCO40_16885;pseudo=true NZ_CP075116.1 Protein Homology CDS 3499357 3499657 . - 0 ID=cds-CCO40_RS16885;Parent=gene-CCO40_RS16885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=CCO40_RS16885;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 3499630 3500364 . - . ID=gene-CCO40_RS16890;Name=CCO40_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16890;old_locus_tag=CCO40_16890 NZ_CP075116.1 Protein Homology CDS 3499630 3500364 . - 0 ID=cds-WP_001005866.1;Parent=gene-CCO40_RS16890;Dbxref=GenBank:WP_001005866.1;Name=WP_001005866.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005860.1;locus_tag=CCO40_RS16890;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001005866.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3501028 3501564 . + . ID=gene-CCO40_RS16895;Name=CCO40_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16895;old_locus_tag=CCO40_16895 NZ_CP075116.1 Protein Homology CDS 3501028 3501564 . + 0 ID=cds-WP_000062035.1;Parent=gene-CCO40_RS16895;Dbxref=GenBank:WP_000062035.1;Name=WP_000062035.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459335.1;locus_tag=CCO40_RS16895;product=fimbrial protein;protein_id=WP_000062035.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3501626 3502387 . + . ID=gene-CCO40_RS16900;Name=stbB;gbkey=Gene;gene=stbB;gene_biotype=protein_coding;locus_tag=CCO40_RS16900;old_locus_tag=CCO40_16900 NZ_CP075116.1 Protein Homology CDS 3501626 3502387 . + 0 ID=cds-WP_000781492.1;Parent=gene-CCO40_RS16900;Dbxref=GenBank:WP_000781492.1;Name=WP_000781492.1;gbkey=CDS;gene=stbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459334.1;locus_tag=CCO40_RS16900;product=fimbrial biogenesis chaperone StbB;protein_id=WP_000781492.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3502371 3504932 . + . ID=gene-CCO40_RS16905;Name=CCO40_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16905;old_locus_tag=CCO40_16905 NZ_CP075116.1 Protein Homology CDS 3502371 3504932 . + 0 ID=cds-WP_000075339.1;Parent=gene-CCO40_RS16905;Dbxref=GenBank:WP_000075339.1;Name=WP_000075339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459333.1;locus_tag=CCO40_RS16905;product=fimbrial outer membrane usher protein;protein_id=WP_000075339.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3504937 3506262 . + . ID=gene-CCO40_RS16910;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=CCO40_RS16910;old_locus_tag=CCO40_16910 NZ_CP075116.1 Protein Homology CDS 3504937 3506262 . + 0 ID=cds-WP_000899090.1;Parent=gene-CCO40_RS16910;Dbxref=GenBank:WP_000899090.1;Name=WP_000899090.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=CCO40_RS16910;product=fimbrial usher protein StbD;protein_id=WP_000899090.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3506228 3506986 . + . ID=gene-CCO40_RS16915;Name=stbE;gbkey=Gene;gene=stbE;gene_biotype=protein_coding;locus_tag=CCO40_RS16915;old_locus_tag=CCO40_16915 NZ_CP075116.1 Protein Homology CDS 3506228 3506986 . + 0 ID=cds-WP_001247031.1;Parent=gene-CCO40_RS16915;Dbxref=GenBank:WP_001247031.1;Name=WP_001247031.1;gbkey=CDS;gene=stbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459331.1;locus_tag=CCO40_RS16915;product=fimbrial biogenesis chaperone StbE;protein_id=WP_001247031.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3507033 3507431 . - . ID=gene-CCO40_RS16920;Name=CCO40_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16920;old_locus_tag=CCO40_16920 NZ_CP075116.1 Protein Homology CDS 3507033 3507431 . - 0 ID=cds-WP_000766840.1;Parent=gene-CCO40_RS16920;Dbxref=GenBank:WP_000766840.1;Name=WP_000766840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459330.1;locus_tag=CCO40_RS16920;product=hypothetical protein;protein_id=WP_000766840.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3508123 3508395 . + . ID=gene-CCO40_RS16925;Name=CCO40_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16925;old_locus_tag=CCO40_16925 NZ_CP075116.1 Protein Homology CDS 3508123 3508395 . + 0 ID=cds-WP_001675688.1;Parent=gene-CCO40_RS16925;Dbxref=GenBank:WP_001675688.1;Name=WP_001675688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459329.1;locus_tag=CCO40_RS16925;product=hypothetical protein;protein_id=WP_001675688.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3508340 3509305 . - . ID=gene-CCO40_RS16930;Name=CCO40_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16930;old_locus_tag=CCO40_16930 NZ_CP075116.1 Protein Homology CDS 3508340 3509305 . - 0 ID=cds-WP_000859020.1;Parent=gene-CCO40_RS16930;Dbxref=GenBank:WP_000859020.1;Name=WP_000859020.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459328.1;locus_tag=CCO40_RS16930;product=LysR family transcriptional regulator;protein_id=WP_000859020.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3509339 3510253 . - . ID=gene-CCO40_RS16935;Name=CCO40_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16935;old_locus_tag=CCO40_16935 NZ_CP075116.1 Protein Homology CDS 3509339 3510253 . - 0 ID=cds-WP_000105593.1;Parent=gene-CCO40_RS16935;Dbxref=GenBank:WP_000105593.1;Name=WP_000105593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459327.1;locus_tag=CCO40_RS16935;product=alpha/beta fold hydrolase;protein_id=WP_000105593.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3510253 3511131 . - . ID=gene-CCO40_RS16940;Name=CCO40_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16940;old_locus_tag=CCO40_16940 NZ_CP075116.1 Protein Homology CDS 3510253 3511131 . - 0 ID=cds-WP_000780211.1;Parent=gene-CCO40_RS16940;Dbxref=GenBank:WP_000780211.1;Name=WP_000780211.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459326.1;locus_tag=CCO40_RS16940;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000780211.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3511146 3511772 . - . ID=gene-CCO40_RS16945;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=CCO40_RS16945;old_locus_tag=CCO40_16945 NZ_CP075116.1 Protein Homology CDS 3511146 3511772 . - 0 ID=cds-WP_000379343.1;Parent=gene-CCO40_RS16945;Dbxref=GenBank:WP_000379343.1;Name=WP_000379343.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459325.1;locus_tag=CCO40_RS16945;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000379343.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3511774 3513195 . - . ID=gene-CCO40_RS16950;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=CCO40_RS16950;old_locus_tag=CCO40_16950 NZ_CP075116.1 Protein Homology CDS 3511774 3513195 . - 0 ID=cds-WP_023221530.1;Parent=gene-CCO40_RS16950;Dbxref=GenBank:WP_023221530.1;Name=WP_023221530.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459324.1;locus_tag=CCO40_RS16950;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_023221530.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3513327 3514565 . - . ID=gene-CCO40_RS16955;Name=CCO40_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16955;old_locus_tag=CCO40_16955 NZ_CP075116.1 Protein Homology CDS 3513327 3514565 . - 0 ID=cds-WP_077909895.1;Parent=gene-CCO40_RS16955;Dbxref=GenBank:WP_077909895.1;Name=WP_077909895.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459323.3;locus_tag=CCO40_RS16955;product=MFS transporter;protein_id=WP_077909895.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3514907 3515230 . - . ID=gene-CCO40_RS16960;Name=CCO40_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS16960;old_locus_tag=CCO40_16960 NZ_CP075116.1 Protein Homology CDS 3514907 3515230 . - 0 ID=cds-WP_001573898.1;Parent=gene-CCO40_RS16960;Dbxref=GenBank:WP_001573898.1;Name=WP_001573898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459322.1;locus_tag=CCO40_RS16960;product=DUF1889 family protein;protein_id=WP_001573898.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3515340 3515411 . - . ID=gene-CCO40_RS22715;Name=CCO40_RS22715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22715;old_locus_tag=CCO40_16965 NZ_CP075116.1 Protein Homology CDS 3515340 3515411 . - 0 ID=cds-WP_071530024.1;Parent=gene-CCO40_RS22715;Dbxref=GenBank:WP_071530024.1;Name=WP_071530024.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020417.7;locus_tag=CCO40_RS22715;product=hypothetical protein;protein_id=WP_071530024.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3515416 3515781 . - . ID=gene-CCO40_RS16970;Name=CCO40_RS16970;end_range=3515781,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS16970;old_locus_tag=CCO40_16970;partial=true;pseudo=true;start_range=.,3515416 NZ_CP075116.1 Protein Homology CDS 3515416 3515781 . - 0 ID=cds-CCO40_RS16970;Parent=gene-CCO40_RS16970;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3515781,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228916.1;locus_tag=CCO40_RS16970;partial=true;product=diol dehydratase reactivase ATPase-like domain-containing protein;pseudo=true;start_range=.,3515416;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3515891 3516559 . + . ID=gene-CCO40_RS16975;Name=CCO40_RS16975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS16975;old_locus_tag=CCO40_16975;partial=true;pseudo=true;start_range=.,3515891 NZ_CP075116.1 Protein Homology CDS 3515891 3516559 . + 0 ID=cds-CCO40_RS16975;Parent=gene-CCO40_RS16975;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=CCO40_RS16975;partial=true;product=IS3-like element ISSty2 family transposase;pseudo=true;start_range=.,3515891;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3516577 3516831 . - . ID=gene-CCO40_RS16980;Name=CCO40_RS16980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS16980;old_locus_tag=CCO40_16980;partial=true;pseudo=true;start_range=.,3516577 NZ_CP075116.1 Protein Homology CDS 3516577 3516831 . - 0 ID=cds-CCO40_RS16980;Parent=gene-CCO40_RS16980;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225313.1;locus_tag=CCO40_RS16980;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;start_range=.,3516577;transl_table=11 NZ_CP075116.1 RefSeq gene 3516995 3517070 . - . ID=gene-CCO40_RS16985;Name=CCO40_RS16985;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS16985;old_locus_tag=CCO40_16985 NZ_CP075116.1 tRNAscan-SE tRNA 3516995 3517070 . - . ID=rna-CCO40_RS16985;Parent=gene-CCO40_RS16985;anticodon=(pos:complement(3517035..3517037));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS16985;product=tRNA-Thr NZ_CP075116.1 tRNAscan-SE exon 3516995 3517070 . - . ID=exon-CCO40_RS16985-1;Parent=rna-CCO40_RS16985;anticodon=(pos:complement(3517035..3517037));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS16985;product=tRNA-Thr NZ_CP075116.1 RefSeq gene 3517186 3518436 . - . ID=gene-CCO40_RS16990;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=CCO40_RS16990;old_locus_tag=CCO40_16990 NZ_CP075116.1 Protein Homology CDS 3517186 3518436 . - 0 ID=cds-WP_094889347.1;Parent=gene-CCO40_RS16990;Dbxref=GenBank:WP_094889347.1;Name=WP_094889347.1;Ontology_term=GO:0055129,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase (NADP+) activity|0004350||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459319.1;locus_tag=CCO40_RS16990;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_094889347.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3518448 3519551 . - . ID=gene-CCO40_RS16995;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=CCO40_RS16995;old_locus_tag=CCO40_16995 NZ_CP075116.1 Protein Homology CDS 3518448 3519551 . - 0 ID=cds-WP_094889348.1;Parent=gene-CCO40_RS16995;Dbxref=GenBank:WP_094889348.1;Name=WP_094889348.1;Ontology_term=GO:0055129,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459318.1;locus_tag=CCO40_RS16995;product=glutamate 5-kinase;protein_id=WP_094889348.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3519834 3520886 . + . ID=gene-CCO40_RS17000;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=CCO40_RS17000;old_locus_tag=CCO40_17000 NZ_CP075116.1 Protein Homology CDS 3519834 3520886 . + 0 ID=cds-WP_094889349.1;Parent=gene-CCO40_RS17000;Dbxref=GenBank:WP_094889349.1;Name=WP_094889349.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459317.1;locus_tag=CCO40_RS17000;product=phosphoporin PhoE;protein_id=WP_094889349.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3520937 3521338 . - . ID=gene-CCO40_RS17005;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=CCO40_RS17005;old_locus_tag=CCO40_17005 NZ_CP075116.1 Protein Homology CDS 3520937 3521338 . - 0 ID=cds-WP_000174696.1;Parent=gene-CCO40_RS17005;Dbxref=GenBank:WP_000174696.1;Name=WP_000174696.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459316.1;locus_tag=CCO40_RS17005;product=sigma factor-binding protein Crl;protein_id=WP_000174696.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3521396 3522640 . - . ID=gene-CCO40_RS17010;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=CCO40_RS17010;old_locus_tag=CCO40_17010 NZ_CP075116.1 Protein Homology CDS 3521396 3522640 . - 0 ID=cds-WP_000189588.1;Parent=gene-CCO40_RS17010;Dbxref=GenBank:WP_000189588.1;Name=WP_000189588.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459315.1;locus_tag=CCO40_RS17010;product=esterase FrsA;protein_id=WP_000189588.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3522729 3523187 . - . ID=gene-CCO40_RS17015;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=CCO40_RS17015;old_locus_tag=CCO40_17015 NZ_CP075116.1 Protein Homology CDS 3522729 3523187 . - 0 ID=cds-WP_001292018.1;Parent=gene-CCO40_RS17015;Dbxref=GenBank:WP_001292018.1;Name=WP_001292018.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=CCO40_RS17015;product=xanthine phosphoribosyltransferase;protein_id=WP_001292018.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3523436 3524893 . + . ID=gene-CCO40_RS17020;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=CCO40_RS17020;old_locus_tag=CCO40_17020 NZ_CP075116.1 Protein Homology CDS 3523436 3524893 . + 0 ID=cds-WP_001292977.1;Parent=gene-CCO40_RS17020;Dbxref=GenBank:WP_001292977.1;Name=WP_001292977.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=CCO40_RS17020;product=cytosol nonspecific dipeptidase;protein_id=WP_001292977.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3525048 3525662 . - . ID=gene-CCO40_RS17025;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=CCO40_RS17025;old_locus_tag=CCO40_17025 NZ_CP075116.1 Protein Homology CDS 3525048 3525662 . - 0 ID=cds-WP_000602087.1;Parent=gene-CCO40_RS17025;Dbxref=GenBank:WP_000602087.1;Name=WP_000602087.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459312.1;locus_tag=CCO40_RS17025;product=peptide chain release factor H;protein_id=WP_000602087.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3525659 3526798 . - . ID=gene-CCO40_RS17030;Name=CCO40_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17030;old_locus_tag=CCO40_17030 NZ_CP075116.1 Protein Homology CDS 3525659 3526798 . - 0 ID=cds-WP_000528902.1;Parent=gene-CCO40_RS17030;Dbxref=GenBank:WP_000528902.1;Name=WP_000528902.1;Ontology_term=GO:0006415;gbkey=CDS;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006895405.1;locus_tag=CCO40_RS17030;product=RNA ligase RtcB family protein;protein_id=WP_000528902.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3527017 3528072 . - . ID=gene-CCO40_RS17035;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=CCO40_RS17035;old_locus_tag=CCO40_17035 NZ_CP075116.1 Protein Homology CDS 3527017 3528072 . - 0 ID=cds-WP_001226196.1;Parent=gene-CCO40_RS17035;Dbxref=GenBank:WP_001226196.1;Name=WP_001226196.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459311.1;locus_tag=CCO40_RS17035;product=DNA polymerase IV;protein_id=WP_001226196.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3528322 3529062 . + . ID=gene-CCO40_RS17040;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;gene_synonym=ldtF;locus_tag=CCO40_RS17040;old_locus_tag=CCO40_17040 NZ_CP075116.1 Protein Homology CDS 3528322 3529062 . + 0 ID=cds-WP_001225658.1;Parent=gene-CCO40_RS17040;Dbxref=GenBank:WP_001225658.1;Name=WP_001225658.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459310.1;locus_tag=CCO40_RS17040;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_001225658.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3529033 3529800 . - . ID=gene-CCO40_RS17045;Name=CCO40_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17045;old_locus_tag=CCO40_17045 NZ_CP075116.1 Protein Homology CDS 3529033 3529800 . - 0 ID=cds-WP_000333387.1;Parent=gene-CCO40_RS17045;Dbxref=GenBank:WP_000333387.1;Name=WP_000333387.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=L-glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459309.1;locus_tag=CCO40_RS17045;product=class II glutamine amidotransferase;protein_id=WP_000333387.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3530013 3530591 . - . ID=gene-CCO40_RS17050;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=CCO40_RS17050;old_locus_tag=CCO40_17050 NZ_CP075116.1 Protein Homology CDS 3530013 3530591 . - 0 ID=cds-WP_000284051.1;Parent=gene-CCO40_RS17050;Dbxref=GenBank:WP_000284051.1;Name=WP_000284051.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459308.1;locus_tag=CCO40_RS17050;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_000284051.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3530831 3533275 . + . ID=gene-CCO40_RS17055;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=CCO40_RS17055;old_locus_tag=CCO40_17055 NZ_CP075116.1 Protein Homology CDS 3530831 3533275 . + 0 ID=cds-WP_000973041.1;Parent=gene-CCO40_RS17055;Dbxref=GenBank:WP_000973041.1;Name=WP_000973041.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=CCO40_RS17055;product=acyl-CoA dehydrogenase FadE;protein_id=WP_000973041.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3533384 3534151 . + . ID=gene-CCO40_RS17060;Name=CCO40_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17060;old_locus_tag=CCO40_17060 NZ_CP075116.1 Protein Homology CDS 3533384 3534151 . + 0 ID=cds-WP_000015789.1;Parent=gene-CCO40_RS17060;Dbxref=GenBank:WP_000015789.1;Name=WP_000015789.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459306.1;locus_tag=CCO40_RS17060;product=amidohydrolase;protein_id=WP_000015789.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3534522 3534929 . + . ID=gene-CCO40_RS17065;Name=CCO40_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17065;old_locus_tag=CCO40_17065 NZ_CP075116.1 Protein Homology CDS 3534522 3534929 . + 0 ID=cds-WP_000788200.1;Parent=gene-CCO40_RS17065;Dbxref=GenBank:WP_000788200.1;Name=WP_000788200.1;Ontology_term=GO:0006457,GO:0044183,GO:0051082;gbkey=CDS;go_function=protein folding chaperone|0044183||IEA,obsolete unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459305.1;locus_tag=CCO40_RS17065;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_000788200.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3535260 3535979 . + . ID=gene-CCO40_RS17070;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=CCO40_RS17070;old_locus_tag=CCO40_17070 NZ_CP075116.1 Protein Homology CDS 3535260 3535979 . + 0 ID=cds-WP_000787603.1;Parent=gene-CCO40_RS17070;Dbxref=GenBank:WP_000787603.1;Name=WP_000787603.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459304.1;locus_tag=CCO40_RS17070;product=adhesin/invasin protein PagN;protein_id=WP_000787603.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3535983 3536198 . - . ID=gene-CCO40_RS17075;Name=CCO40_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17075;old_locus_tag=CCO40_17075 NZ_CP075116.1 Protein Homology CDS 3535983 3536198 . - 0 ID=cds-WP_001575654.1;Parent=gene-CCO40_RS17075;Dbxref=GenBank:WP_001575654.1;Name=WP_001575654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=CCO40_RS17075;product=hypothetical protein;protein_id=WP_001575654.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3536318 3537265 . - . ID=gene-CCO40_RS17080;Name=CCO40_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17080;old_locus_tag=CCO40_17080 NZ_CP075116.1 Protein Homology CDS 3536318 3537265 . - 0 ID=cds-WP_094889350.1;Parent=gene-CCO40_RS17080;Dbxref=GenBank:WP_094889350.1;Name=WP_094889350.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=CCO40_RS17080;product=LysR family transcriptional regulator;protein_id=WP_094889350.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3537762 3537999 . - . ID=gene-CCO40_RS17085;Name=CCO40_RS17085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS17085;old_locus_tag=CCO40_17085;partial=true;pseudo=true;start_range=.,3537762 NZ_CP075116.1 Protein Homology CDS 3537762 3537999 . - 0 ID=cds-CCO40_RS17085;Parent=gene-CCO40_RS17085;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602066.1;locus_tag=CCO40_RS17085;partial=true;product=PerC family transcriptional regulator;pseudo=true;start_range=.,3537762;transl_table=11 NZ_CP075116.1 RefSeq gene 3538082 3538903 . - . ID=gene-CCO40_RS17090;Name=CCO40_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17090;old_locus_tag=CCO40_17090 NZ_CP075116.1 Protein Homology CDS 3538082 3538903 . - 0 ID=cds-WP_000119389.1;Parent=gene-CCO40_RS17090;Dbxref=GenBank:WP_000119389.1;Name=WP_000119389.1;Ontology_term=GO:0005975,GO:0016787,GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459301.1;locus_tag=CCO40_RS17090;product=polysaccharide deacetylase family protein;protein_id=WP_000119389.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3539310 3539780 . - . ID=gene-CCO40_RS17095;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=CCO40_RS17095;old_locus_tag=CCO40_17095 NZ_CP075116.1 Protein Homology CDS 3539310 3539780 . - 0 ID=cds-WP_076934809.1;Parent=gene-CCO40_RS17095;Dbxref=GenBank:WP_076934809.1;Name=WP_076934809.1;gbkey=CDS;gene=afaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459300.1;locus_tag=CCO40_RS17095;product=AfaD family invasin;protein_id=WP_076934809.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3539802 3542312 . - . ID=gene-CCO40_RS17100;Name=CCO40_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17100;old_locus_tag=CCO40_17100 NZ_CP075116.1 Protein Homology CDS 3539802 3542312 . - 0 ID=cds-WP_094889351.1;Parent=gene-CCO40_RS17100;Dbxref=GenBank:WP_094889351.1;Name=WP_094889351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=CCO40_RS17100;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_094889351.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3542336 3543073 . - . ID=gene-CCO40_RS17105;Name=safB;gbkey=Gene;gene=safB;gene_biotype=protein_coding;locus_tag=CCO40_RS17105;old_locus_tag=CCO40_17105 NZ_CP075116.1 Protein Homology CDS 3542336 3543073 . - 0 ID=cds-WP_094889352.1;Parent=gene-CCO40_RS17105;Dbxref=GenBank:WP_094889352.1;Name=WP_094889352.1;gbkey=CDS;gene=safB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264198.1;locus_tag=CCO40_RS17105;product=pili assembly chaperone SafB;protein_id=WP_094889352.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3543157 3543651 . - . ID=gene-CCO40_RS17110;Name=CCO40_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17110;old_locus_tag=CCO40_17110 NZ_CP075116.1 Protein Homology CDS 3543157 3543651 . - 0 ID=cds-WP_061376324.1;Parent=gene-CCO40_RS17110;Dbxref=GenBank:WP_061376324.1;Name=WP_061376324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749863.1;locus_tag=CCO40_RS17110;product=pilus assembly protein;protein_id=WP_061376324.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3544412 3545003 . - . ID=gene-CCO40_RS17115;Name=CCO40_RS17115;end_range=3545003,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS17115;old_locus_tag=CCO40_17115;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 3544412 3545003 . - 0 ID=cds-CCO40_RS17115;Parent=gene-CCO40_RS17115;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=3545003,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611491.1;locus_tag=CCO40_RS17115;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 3544919 3545116 . - . ID=gene-CCO40_RS22720;Name=CCO40_RS22720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22720 NZ_CP075116.1 Protein Homology CDS 3544919 3545116 . - 0 ID=cds-WP_001224072.1;Parent=gene-CCO40_RS22720;Dbxref=GenBank:WP_001224072.1;Name=WP_001224072.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.7;locus_tag=CCO40_RS22720;product=transposase;protein_id=WP_001224072.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3545169 3545342 . + . ID=gene-CCO40_RS17120;Name=CCO40_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17120;old_locus_tag=CCO40_17120 NZ_CP075116.1 GeneMarkS-2+ CDS 3545169 3545342 . + 0 ID=cds-WP_001531381.1;Parent=gene-CCO40_RS17120;Dbxref=GenBank:WP_001531381.1;Name=WP_001531381.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO40_RS17120;product=SymE family type I addiction module toxin;protein_id=WP_001531381.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3545407 3545874 . - . ID=gene-CCO40_RS17125;Name=CCO40_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17125;old_locus_tag=CCO40_17125 NZ_CP075116.1 Protein Homology CDS 3545407 3545874 . - 0 ID=cds-WP_001284951.1;Parent=gene-CCO40_RS17125;Dbxref=GenBank:WP_001284951.1;Name=WP_001284951.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026931.8;locus_tag=CCO40_RS17125;product=Imm42 family immunity protein;protein_id=WP_001284951.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3545867 3546175 . - . ID=gene-CCO40_RS17130;Name=CCO40_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17130;old_locus_tag=CCO40_17130 NZ_CP075116.1 GeneMarkS-2+ CDS 3545867 3546175 . - 0 ID=cds-WP_165488057.1;Parent=gene-CCO40_RS17130;Dbxref=GenBank:WP_165488057.1;Name=WP_165488057.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO40_RS17130;product=hypothetical protein;protein_id=WP_165488057.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3546232 3546408 . - . ID=gene-CCO40_RS22540;Name=CCO40_RS22540;end_range=3546408,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22540;old_locus_tag=CCO40_17135;partial=true;pseudo=true;start_range=.,3546232 NZ_CP075116.1 Protein Homology CDS 3546232 3546408 . - 0 ID=cds-CCO40_RS22540;Parent=gene-CCO40_RS22540;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3546408,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=CCO40_RS22540;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,3546232;transl_table=11 NZ_CP075116.1 RefSeq gene 3546545 3546808 . + . ID=gene-CCO40_RS17140;Name=CCO40_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17140;old_locus_tag=CCO40_17140 NZ_CP075116.1 Protein Homology CDS 3546545 3546808 . + 0 ID=cds-WP_000994215.1;Parent=gene-CCO40_RS17140;Dbxref=GenBank:WP_000994215.1;Name=WP_000994215.1;Ontology_term=GO:0016070,GO:0003723,GO:0004521;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994228.1;locus_tag=CCO40_RS17140;product=SymE family type I addiction module toxin;protein_id=WP_000994215.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3546855 3547289 . - . ID=gene-CCO40_RS17145;Name=CCO40_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17145;old_locus_tag=CCO40_17145 NZ_CP075116.1 Protein Homology CDS 3546855 3547289 . - 0 ID=cds-WP_000789494.1;Parent=gene-CCO40_RS17145;Dbxref=GenBank:WP_000789494.1;Name=WP_000789494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789494.1;locus_tag=CCO40_RS17145;product=hypothetical protein;protein_id=WP_000789494.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3547286 3548839 . - . ID=gene-CCO40_RS17150;Name=CCO40_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17150;old_locus_tag=CCO40_17150 NZ_CP075116.1 Protein Homology CDS 3547286 3548839 . - 0 ID=cds-WP_094897886.1;Parent=gene-CCO40_RS17150;Dbxref=GenBank:WP_094897886.1;Name=WP_094897886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001637032.1;locus_tag=CCO40_RS17150;product=RHS repeat-associated core domain-containing protein;protein_id=WP_094897886.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3548854 3549156 . + . ID=gene-CCO40_RS17155;Name=CCO40_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17155;old_locus_tag=CCO40_17155 NZ_CP075116.1 Protein Homology CDS 3548854 3549156 . + 0 ID=cds-WP_170930898.1;Parent=gene-CCO40_RS17155;Dbxref=GenBank:WP_170930898.1;Name=WP_170930898.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012669390.1;locus_tag=CCO40_RS17155;product=SymE family type I addiction module toxin;protein_id=WP_170930898.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3549201 3549518 . - . ID=gene-CCO40_RS17160;Name=CCO40_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17160;old_locus_tag=CCO40_17160 NZ_CP075116.1 GeneMarkS-2+ CDS 3549201 3549518 . - 0 ID=cds-WP_140428680.1;Parent=gene-CCO40_RS17160;Dbxref=GenBank:WP_140428680.1;Name=WP_140428680.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO40_RS17160;product=hypothetical protein;protein_id=WP_140428680.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3549484 3554169 . - . ID=gene-CCO40_RS17165;Name=CCO40_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17165;old_locus_tag=CCO40_17165 NZ_CP075116.1 Protein Homology CDS 3549484 3554169 . - 0 ID=cds-WP_220569202.1;Parent=gene-CCO40_RS17165;Dbxref=GenBank:WP_220569202.1;Name=WP_220569202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442161.1;locus_tag=CCO40_RS17165;product=RHS repeat-associated core domain-containing protein;protein_id=WP_220569202.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3554185 3554643 . - . ID=gene-CCO40_RS17170;Name=CCO40_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17170;old_locus_tag=CCO40_17170 NZ_CP075116.1 Protein Homology CDS 3554185 3554643 . - 0 ID=cds-WP_000186513.1;Parent=gene-CCO40_RS17170;Dbxref=GenBank:WP_000186513.1;Name=WP_000186513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000186512.1;locus_tag=CCO40_RS17170;product=DcrB-related protein;protein_id=WP_000186513.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3554703 3556934 . - . ID=gene-CCO40_RS17175;Name=CCO40_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17175;old_locus_tag=CCO40_17175 NZ_CP075116.1 Protein Homology CDS 3554703 3556934 . - 0 ID=cds-WP_000011513.1;Parent=gene-CCO40_RS17175;Dbxref=GenBank:WP_000011513.1;Name=WP_000011513.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505545.1;locus_tag=CCO40_RS17175;product=type VI secretion system Vgr family protein;protein_id=WP_000011513.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3557331 3557852 . - . ID=gene-CCO40_RS17180;Name=CCO40_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17180;old_locus_tag=CCO40_17180 NZ_CP075116.1 Protein Homology CDS 3557331 3557852 . - 0 ID=cds-WP_000968384.1;Parent=gene-CCO40_RS17180;Dbxref=GenBank:WP_000968384.1;Name=WP_000968384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459286.1;locus_tag=CCO40_RS17180;product=DUF2778 domain-containing protein;protein_id=WP_000968384.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3557876 3558292 . - . ID=gene-CCO40_RS17185;Name=CCO40_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17185;old_locus_tag=CCO40_17185 NZ_CP075116.1 Protein Homology CDS 3557876 3558292 . - 0 ID=cds-WP_000759642.1;Parent=gene-CCO40_RS17185;Dbxref=GenBank:WP_000759642.1;Name=WP_000759642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459285.1;locus_tag=CCO40_RS17185;product=DUF2195 family protein;protein_id=WP_000759642.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3558289 3558411 . - . ID=gene-CCO40_RS22545;Name=CCO40_RS22545;end_range=3558411,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22545;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 3558289 3558411 . - 0 ID=cds-CCO40_RS22545;Parent=gene-CCO40_RS22545;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3558411,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459284.1;locus_tag=CCO40_RS22545;partial=true;product=TagF domain-containing protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 3558420 3558881 . - . ID=gene-CCO40_RS17190;Name=CCO40_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17190;old_locus_tag=CCO40_17190 NZ_CP075116.1 Protein Homology CDS 3558420 3558881 . - 0 ID=cds-WP_001684272.1;Parent=gene-CCO40_RS17190;Dbxref=GenBank:WP_001684272.1;Name=WP_001684272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670388.1;locus_tag=CCO40_RS17190;product=Tgi2PP family T6SS immunity protein;protein_id=WP_001684272.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3558866 3559336 . - . ID=gene-CCO40_RS17195;Name=CCO40_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17195;old_locus_tag=CCO40_17195 NZ_CP075116.1 Protein Homology CDS 3558866 3559336 . - 0 ID=cds-WP_000528843.1;Parent=gene-CCO40_RS17195;Dbxref=GenBank:WP_000528843.1;Name=WP_000528843.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528842.1;locus_tag=CCO40_RS17195;product=glucosaminidase domain-containing protein;protein_id=WP_000528843.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3559379 3560146 . - . ID=gene-CCO40_RS17200;Name=CCO40_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17200;old_locus_tag=CCO40_17200 NZ_CP075116.1 Protein Homology CDS 3559379 3560146 . - 0 ID=cds-WP_001254127.1;Parent=gene-CCO40_RS17200;Dbxref=GenBank:WP_001254127.1;Name=WP_001254127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254119.1;locus_tag=CCO40_RS17200;product=TagF domain-containing protein;protein_id=WP_001254127.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3560146 3564015 . - . ID=gene-CCO40_RS17205;Name=icmF;gbkey=Gene;gene=icmF;gene_biotype=protein_coding;locus_tag=CCO40_RS17205;old_locus_tag=CCO40_17205 NZ_CP075116.1 Protein Homology CDS 3560146 3564015 . - 0 ID=cds-WP_094889354.1;Parent=gene-CCO40_RS17205;Dbxref=GenBank:WP_094889354.1;Name=WP_094889354.1;gbkey=CDS;gene=icmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=CCO40_RS17205;product=type VI secretion protein IcmF;protein_id=WP_094889354.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3564049 3564480 . - . ID=gene-CCO40_RS17210;Name=sciR;gbkey=Gene;gene=sciR;gene_biotype=protein_coding;locus_tag=CCO40_RS17210;old_locus_tag=CCO40_17210 NZ_CP075116.1 Protein Homology CDS 3564049 3564480 . - 0 ID=cds-WP_094889360.1;Parent=gene-CCO40_RS17210;Dbxref=GenBank:WP_094889360.1;Name=WP_094889360.1;gbkey=CDS;gene=sciR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459282.1;locus_tag=CCO40_RS17210;product=Shiga-like toxin A subunit SciR;protein_id=WP_094889360.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3564683 3565456 . - . ID=gene-CCO40_RS17215;Name=CCO40_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17215;old_locus_tag=CCO40_17215 NZ_CP075116.1 Protein Homology CDS 3564683 3565456 . - 0 ID=cds-WP_140428677.1;Parent=gene-CCO40_RS17215;Dbxref=GenBank:WP_140428677.1;Name=WP_140428677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459281.1;locus_tag=CCO40_RS17215;product=Rap1a/Tai family immunity protein;protein_id=WP_140428677.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3565461 3566765 . - . ID=gene-CCO40_RS17220;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=CCO40_RS17220;old_locus_tag=CCO40_17220 NZ_CP075116.1 Protein Homology CDS 3565461 3566765 . - 0 ID=cds-WP_071055428.1;Parent=gene-CCO40_RS17220;Dbxref=GenBank:WP_071055428.1;Name=WP_071055428.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssL;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459280.1;locus_tag=CCO40_RS17220;product=type VI secretion system protein TssL%2C long form;protein_id=WP_071055428.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3566762 3568105 . - . ID=gene-CCO40_RS17225;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=CCO40_RS17225;old_locus_tag=CCO40_17225 NZ_CP075116.1 Protein Homology CDS 3566762 3568105 . - 0 ID=cds-WP_000118732.1;Parent=gene-CCO40_RS17225;Dbxref=GenBank:WP_000118732.1;Name=WP_000118732.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459279.1;locus_tag=CCO40_RS17225;product=type VI secretion system baseplate subunit TssK;protein_id=WP_000118732.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3568109 3568645 . - . ID=gene-CCO40_RS17230;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=CCO40_RS17230;old_locus_tag=CCO40_17230 NZ_CP075116.1 Protein Homology CDS 3568109 3568645 . - 0 ID=cds-WP_001682196.1;Parent=gene-CCO40_RS17230;Dbxref=GenBank:WP_001682196.1;Name=WP_001682196.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=CCO40_RS17230;product=type VI secretion system lipoprotein TssJ;protein_id=WP_001682196.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3568713 3569198 . - . ID=gene-CCO40_RS17235;Name=CCO40_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17235;old_locus_tag=CCO40_17235 NZ_CP075116.1 Protein Homology CDS 3568713 3569198 . - 0 ID=cds-WP_000119443.1;Parent=gene-CCO40_RS17235;Dbxref=GenBank:WP_000119443.1;Name=WP_000119443.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459277.1;locus_tag=CCO40_RS17235;product=Hcp family type VI secretion system effector;protein_id=WP_000119443.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3569341 3569724 . - . ID=gene-CCO40_RS17240;Name=CCO40_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17240;old_locus_tag=CCO40_17240 NZ_CP075116.1 Protein Homology CDS 3569341 3569724 . - 0 ID=cds-WP_000379146.1;Parent=gene-CCO40_RS17240;Dbxref=GenBank:WP_000379146.1;Name=WP_000379146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459276.1;locus_tag=CCO40_RS17240;product=type VI secretion system amidase immunity protein Tai4;protein_id=WP_000379146.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3569709 3570194 . - . ID=gene-CCO40_RS17245;Name=CCO40_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17245;old_locus_tag=CCO40_17245 NZ_CP075116.1 Protein Homology CDS 3569709 3570194 . - 0 ID=cds-WP_001081551.1;Parent=gene-CCO40_RS17245;Dbxref=GenBank:WP_001081551.1;Name=WP_001081551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459275.1;locus_tag=CCO40_RS17245;product=type VI secretion system amidase effector protein Tae4;protein_id=WP_001081551.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3570237 3570431 . - . ID=gene-CCO40_RS22550;Name=CCO40_RS22550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22550;partial=true;pseudo=true;start_range=.,3570237 NZ_CP075116.1 Protein Homology CDS 3570237 3570431 . - 0 ID=cds-CCO40_RS22550;Parent=gene-CCO40_RS22550;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=CCO40_RS22550;partial=true;product=type VI secretion system lipoprotein TssJ;pseudo=true;start_range=.,3570237;transl_table=11 NZ_CP075116.1 RefSeq gene 3570498 3570983 . - . ID=gene-CCO40_RS17250;Name=CCO40_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17250;old_locus_tag=CCO40_17250 NZ_CP075116.1 Protein Homology CDS 3570498 3570983 . - 0 ID=cds-WP_000312802.1;Parent=gene-CCO40_RS17250;Dbxref=GenBank:WP_000312802.1;Name=WP_000312802.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=CCO40_RS17250;product=Hcp family type VI secretion system effector;protein_id=WP_000312802.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3571220 3571645 . - . ID=gene-CCO40_RS17255;Name=CCO40_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17255;old_locus_tag=CCO40_17255 NZ_CP075116.1 Protein Homology CDS 3571220 3571645 . - 0 ID=cds-WP_001171573.1;Parent=gene-CCO40_RS17255;Dbxref=GenBank:WP_001171573.1;Name=WP_001171573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001171576.1;locus_tag=CCO40_RS17255;product=STY0301 family protein;protein_id=WP_001171573.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3571617 3572018 . - . ID=gene-CCO40_RS17260;Name=CCO40_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17260;old_locus_tag=CCO40_17260 NZ_CP075116.1 Protein Homology CDS 3571617 3572018 . - 0 ID=cds-WP_001147175.1;Parent=gene-CCO40_RS17260;Dbxref=GenBank:WP_001147175.1;Name=WP_001147175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001147173.1;locus_tag=CCO40_RS17260;product=BPSL0067 family protein;protein_id=WP_001147175.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3572071 3573579 . - . ID=gene-CCO40_RS17265;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=CCO40_RS17265;old_locus_tag=CCO40_17265 NZ_CP075116.1 Protein Homology CDS 3572071 3573579 . - 0 ID=cds-WP_000013889.1;Parent=gene-CCO40_RS17265;Dbxref=GenBank:WP_000013889.1;Name=WP_000013889.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459271.1;locus_tag=CCO40_RS17265;product=type VI secretion system contractile sheath large subunit;protein_id=WP_000013889.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3573603 3574145 . - . ID=gene-CCO40_RS17270;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=CCO40_RS17270;old_locus_tag=CCO40_17270 NZ_CP075116.1 Protein Homology CDS 3573603 3574145 . - 0 ID=cds-WP_000996815.1;Parent=gene-CCO40_RS17270;Dbxref=GenBank:WP_000996815.1;Name=WP_000996815.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459270.1;locus_tag=CCO40_RS17270;product=type VI secretion system contractile sheath small subunit;protein_id=WP_000996815.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3574245 3576884 . - . ID=gene-CCO40_RS17275;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=CCO40_RS17275;old_locus_tag=CCO40_17275 NZ_CP075116.1 Protein Homology CDS 3574245 3576884 . - 0 ID=cds-WP_094889355.1;Parent=gene-CCO40_RS17275;Dbxref=GenBank:WP_094889355.1;Name=WP_094889355.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459269.1;locus_tag=CCO40_RS17275;product=type VI secretion system ATPase TssH;protein_id=WP_094889355.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3577252 3578154 . + . ID=gene-CCO40_RS17280;Name=tagK;gbkey=Gene;gene=tagK;gene_biotype=protein_coding;locus_tag=CCO40_RS17280;old_locus_tag=CCO40_17280 NZ_CP075116.1 Protein Homology CDS 3577252 3578154 . + 0 ID=cds-WP_000806682.1;Parent=gene-CCO40_RS17280;Dbxref=GenBank:WP_000806682.1;Name=WP_000806682.1;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459268.1;locus_tag=CCO40_RS17280;product=type VI secretion system-associated protein TagK;protein_id=WP_000806682.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3578141 3578965 . + . ID=gene-CCO40_RS17285;Name=CCO40_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17285;old_locus_tag=CCO40_17285 NZ_CP075116.1 Protein Homology CDS 3578141 3578965 . + 0 ID=cds-WP_023181859.1;Parent=gene-CCO40_RS17285;Dbxref=GenBank:WP_023181859.1;Name=WP_023181859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459267.1;locus_tag=CCO40_RS17285;product=type VI secretion system accessory protein TagJ;protein_id=WP_023181859.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3578962 3579456 . + . ID=gene-CCO40_RS17290;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=CCO40_RS17290;old_locus_tag=CCO40_17290 NZ_CP075116.1 Protein Homology CDS 3578962 3579456 . + 0 ID=cds-WP_000108007.1;Parent=gene-CCO40_RS17290;Dbxref=GenBank:WP_000108007.1;Name=WP_000108007.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459266.1;locus_tag=CCO40_RS17290;product=type VI secretion system baseplate subunit TssE;protein_id=WP_000108007.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3579472 3581355 . + . ID=gene-CCO40_RS17295;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=CCO40_RS17295;old_locus_tag=CCO40_17295 NZ_CP075116.1 Protein Homology CDS 3579472 3581355 . + 0 ID=cds-WP_000371506.1;Parent=gene-CCO40_RS17295;Dbxref=GenBank:WP_000371506.1;Name=WP_000371506.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459265.1;locus_tag=CCO40_RS17295;product=type VI secretion system baseplate subunit TssF;protein_id=WP_000371506.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3581352 3582347 . + . ID=gene-CCO40_RS17300;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=CCO40_RS17300;old_locus_tag=CCO40_17300 NZ_CP075116.1 Protein Homology CDS 3581352 3582347 . + 0 ID=cds-WP_094889356.1;Parent=gene-CCO40_RS17300;Dbxref=GenBank:WP_094889356.1;Name=WP_094889356.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459264.1;locus_tag=CCO40_RS17300;product=type VI secretion system baseplate subunit TssG;protein_id=WP_094889356.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3582358 3583413 . + . ID=gene-CCO40_RS17305;Name=CCO40_RS17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17305;old_locus_tag=CCO40_17305 NZ_CP075116.1 Protein Homology CDS 3582358 3583413 . + 0 ID=cds-WP_094889357.1;Parent=gene-CCO40_RS17305;Dbxref=GenBank:WP_094889357.1;Name=WP_094889357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459263.1;locus_tag=CCO40_RS17305;product=type VI secretion system protein TssA;protein_id=WP_094889357.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3583735 3583811 . - . ID=gene-CCO40_RS17310;Name=CCO40_RS17310;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS17310;old_locus_tag=CCO40_17310 NZ_CP075116.1 tRNAscan-SE tRNA 3583735 3583811 . - . ID=rna-CCO40_RS17310;Parent=gene-CCO40_RS17310;anticodon=(pos:complement(3583775..3583777));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS17310;product=tRNA-Asp NZ_CP075116.1 tRNAscan-SE exon 3583735 3583811 . - . ID=exon-CCO40_RS17310-1;Parent=rna-CCO40_RS17310;anticodon=(pos:complement(3583775..3583777));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS17310;product=tRNA-Asp NZ_CP075116.1 RefSeq gene 3583945 3584676 . - . ID=gene-CCO40_RS17315;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=CCO40_RS17315;old_locus_tag=CCO40_17315 NZ_CP075116.1 Protein Homology CDS 3583945 3584676 . - 0 ID=cds-WP_001670675.1;Parent=gene-CCO40_RS17315;Dbxref=GenBank:WP_001670675.1;Name=WP_001670675.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459262.1;locus_tag=CCO40_RS17315;product=DNA polymerase III subunit epsilon;protein_id=WP_001670675.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3584740 3585207 . + . ID=gene-CCO40_RS17320;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=CCO40_RS17320;old_locus_tag=CCO40_17320 NZ_CP075116.1 Protein Homology CDS 3584740 3585207 . + 0 ID=cds-WP_000917872.1;Parent=gene-CCO40_RS17320;Dbxref=GenBank:WP_000917872.1;Name=WP_000917872.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459261.1;locus_tag=CCO40_RS17320;product=ribonuclease HI;protein_id=WP_000917872.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3585204 3585926 . - . ID=gene-CCO40_RS17325;Name=CCO40_RS17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17325;old_locus_tag=CCO40_17325 NZ_CP075116.1 Protein Homology CDS 3585204 3585926 . - 0 ID=cds-WP_000801238.1;Parent=gene-CCO40_RS17325;Dbxref=GenBank:WP_000801238.1;Name=WP_000801238.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459260.1;locus_tag=CCO40_RS17325;product=class I SAM-dependent methyltransferase;protein_id=WP_000801238.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3585961 3586716 . + . ID=gene-CCO40_RS17330;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=CCO40_RS17330;old_locus_tag=CCO40_17330 NZ_CP075116.1 Protein Homology CDS 3585961 3586716 . + 0 ID=cds-WP_001052773.1;Parent=gene-CCO40_RS17330;Dbxref=GenBank:WP_001052773.1;Name=WP_001052773.1;Ontology_term=GO:0051596,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459259.1;locus_tag=CCO40_RS17330;product=hydroxyacylglutathione hydrolase;protein_id=WP_001052773.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3586788 3588155 . + . ID=gene-CCO40_RS17335;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=CCO40_RS17335;old_locus_tag=CCO40_17335 NZ_CP075116.1 Protein Homology CDS 3586788 3588155 . + 0 ID=cds-WP_000644706.1;Parent=gene-CCO40_RS17335;Dbxref=GenBank:WP_000644706.1;Name=WP_000644706.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=CCO40_RS17335;product=murein transglycosylase D;protein_id=WP_000644706.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3588211 3588981 . - . ID=gene-CCO40_RS17340;Name=CCO40_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17340;old_locus_tag=CCO40_17340 NZ_CP075116.1 Protein Homology CDS 3588211 3588981 . - 0 ID=cds-WP_000207241.1;Parent=gene-CCO40_RS17340;Dbxref=GenBank:WP_000207241.1;Name=WP_000207241.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459257.1;locus_tag=CCO40_RS17340;product=class I SAM-dependent methyltransferase;protein_id=WP_000207241.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3589059 3589859 . - . ID=gene-CCO40_RS17345;Name=CCO40_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17345;old_locus_tag=CCO40_17345 NZ_CP075116.1 Protein Homology CDS 3589059 3589859 . - 0 ID=cds-WP_001230970.1;Parent=gene-CCO40_RS17345;Dbxref=GenBank:WP_001230970.1;Name=WP_001230970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=CCO40_RS17345;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001230970.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3589991 3591166 . - . ID=gene-CCO40_RS17350;Name=CCO40_RS17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17350;old_locus_tag=CCO40_17350 NZ_CP075116.1 Protein Homology CDS 3589991 3591166 . - 0 ID=cds-WP_094889358.1;Parent=gene-CCO40_RS17350;Dbxref=GenBank:WP_094889358.1;Name=WP_094889358.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=CCO40_RS17350;product=MFS transporter;protein_id=WP_094889358.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3591271 3592185 . + . ID=gene-CCO40_RS17355;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=CCO40_RS17355;old_locus_tag=CCO40_17355 NZ_CP075116.1 Protein Homology CDS 3591271 3592185 . + 0 ID=cds-WP_000648536.1;Parent=gene-CCO40_RS17355;Dbxref=GenBank:WP_000648536.1;Name=WP_000648536.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459254.1;locus_tag=CCO40_RS17355;product=DNA-binding transcriptional regulator YafC;protein_id=WP_000648536.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3592206 3593009 . - . ID=gene-CCO40_RS17360;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=CCO40_RS17360;old_locus_tag=CCO40_17360 NZ_CP075116.1 Protein Homology CDS 3592206 3593009 . - 0 ID=cds-WP_094889359.1;Parent=gene-CCO40_RS17360;Dbxref=GenBank:WP_094889359.1;Name=WP_094889359.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=CCO40_RS17360;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_094889359.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3593174 3593250 . - . ID=gene-CCO40_RS17365;Name=CCO40_RS17365;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS17365;old_locus_tag=CCO40_17365 NZ_CP075116.1 tRNAscan-SE tRNA 3593174 3593250 . - . ID=rna-CCO40_RS17365;Parent=gene-CCO40_RS17365;anticodon=(pos:complement(3593214..3593216));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS17365;product=tRNA-Asp NZ_CP075116.1 tRNAscan-SE exon 3593174 3593250 . - . ID=exon-CCO40_RS17365-1;Parent=rna-CCO40_RS17365;anticodon=(pos:complement(3593214..3593216));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS17365;product=tRNA-Asp NZ_CP075116.1 RefSeq gene 3593442 3593557 . - . ID=gene-CCO40_RS17370;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO40_RS17370;old_locus_tag=CCO40_17370 NZ_CP075116.1 cmsearch rRNA 3593442 3593557 . - . ID=rna-CCO40_RS17370;Parent=gene-CCO40_RS17370;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS17370;product=5S ribosomal RNA NZ_CP075116.1 cmsearch exon 3593442 3593557 . - . ID=exon-CCO40_RS17370-1;Parent=rna-CCO40_RS17370;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS17370;product=5S ribosomal RNA NZ_CP075116.1 RefSeq gene 3593756 3596762 . - . ID=gene-CCO40_RS17375;Name=CCO40_RS17375;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO40_RS17375;old_locus_tag=CCO40_17375 NZ_CP075116.1 cmsearch rRNA 3593756 3596762 . - . ID=rna-CCO40_RS17375;Parent=gene-CCO40_RS17375;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS17375;product=23S ribosomal RNA NZ_CP075116.1 cmsearch exon 3593756 3596762 . - . ID=exon-CCO40_RS17375-1;Parent=rna-CCO40_RS17375;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS17375;product=23S ribosomal RNA NZ_CP075116.1 RefSeq gene 3596945 3597020 . - . ID=gene-CCO40_RS17380;Name=CCO40_RS17380;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS17380;old_locus_tag=CCO40_17380 NZ_CP075116.1 tRNAscan-SE tRNA 3596945 3597020 . - . ID=rna-CCO40_RS17380;Parent=gene-CCO40_RS17380;anticodon=(pos:complement(3596985..3596987));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS17380;product=tRNA-Ala NZ_CP075116.1 tRNAscan-SE exon 3596945 3597020 . - . ID=exon-CCO40_RS17380-1;Parent=rna-CCO40_RS17380;anticodon=(pos:complement(3596985..3596987));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS17380;product=tRNA-Ala NZ_CP075116.1 RefSeq gene 3597132 3597208 . - . ID=gene-CCO40_RS17385;Name=CCO40_RS17385;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS17385;old_locus_tag=CCO40_17385 NZ_CP075116.1 tRNAscan-SE tRNA 3597132 3597208 . - . ID=rna-CCO40_RS17385;Parent=gene-CCO40_RS17385;anticodon=(pos:complement(3597172..3597174));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS17385;product=tRNA-Ile NZ_CP075116.1 tRNAscan-SE exon 3597132 3597208 . - . ID=exon-CCO40_RS17385-1;Parent=rna-CCO40_RS17385;anticodon=(pos:complement(3597172..3597174));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS17385;product=tRNA-Ile NZ_CP075116.1 RefSeq gene 3597278 3598819 . - . ID=gene-CCO40_RS17390;Name=CCO40_RS17390;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO40_RS17390;old_locus_tag=CCO40_17390 NZ_CP075116.1 cmsearch rRNA 3597278 3598819 . - . ID=rna-CCO40_RS17390;Parent=gene-CCO40_RS17390;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS17390;product=16S ribosomal RNA NZ_CP075116.1 cmsearch exon 3597278 3598819 . - . ID=exon-CCO40_RS17390-1;Parent=rna-CCO40_RS17390;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS17390;product=16S ribosomal RNA NZ_CP075116.1 RefSeq gene 3599190 3599756 . - . ID=gene-CCO40_RS17395;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=CCO40_RS17395;old_locus_tag=CCO40_17395 NZ_CP075116.1 Protein Homology CDS 3599190 3599756 . - 0 ID=cds-WP_001140158.1;Parent=gene-CCO40_RS17395;Dbxref=GenBank:WP_001140158.1;Name=WP_001140158.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459252.1;locus_tag=CCO40_RS17395;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_001140158.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3599946 3600977 . + . ID=gene-CCO40_RS17400;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=CCO40_RS17400;old_locus_tag=CCO40_17400 NZ_CP075116.1 Protein Homology CDS 3599946 3600977 . + 0 ID=cds-WP_000594021.1;Parent=gene-CCO40_RS17400;Dbxref=GenBank:WP_000594021.1;Name=WP_000594021.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=CCO40_RS17400;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_000594021.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3600970 3601623 . + . ID=gene-CCO40_RS17405;Name=CCO40_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17405;old_locus_tag=CCO40_17405 NZ_CP075116.1 Protein Homology CDS 3600970 3601623 . + 0 ID=cds-WP_001287486.1;Parent=gene-CCO40_RS17405;Dbxref=GenBank:WP_001287486.1;Name=WP_001287486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=CCO40_RS17405;product=methionine ABC transporter permease MetI;protein_id=WP_001287486.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3601662 3602477 . + . ID=gene-CCO40_RS17410;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=CCO40_RS17410;old_locus_tag=CCO40_17410 NZ_CP075116.1 Protein Homology CDS 3601662 3602477 . + 0 ID=cds-WP_000874215.1;Parent=gene-CCO40_RS17410;Dbxref=GenBank:WP_000874215.1;Name=WP_000874215.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=CCO40_RS17410;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_000874215.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3602596 3603000 . + . ID=gene-CCO40_RS17415;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=CCO40_RS17415;old_locus_tag=CCO40_17415 NZ_CP075116.1 Protein Homology CDS 3602596 3603000 . + 0 ID=cds-WP_001202315.1;Parent=gene-CCO40_RS17415;Dbxref=GenBank:WP_001202315.1;Name=WP_001202315.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=CCO40_RS17415;product=envelope stress sensor lipoprotein RcsF;protein_id=WP_001202315.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3602997 3603704 . + . ID=gene-CCO40_RS17420;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=CCO40_RS17420;old_locus_tag=CCO40_17420 NZ_CP075116.1 Protein Homology CDS 3602997 3603704 . + 0 ID=cds-WP_000093988.1;Parent=gene-CCO40_RS17420;Dbxref=GenBank:WP_000093988.1;Name=WP_000093988.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459247.1;locus_tag=CCO40_RS17420;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_000093988.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3603815 3605533 . + . ID=gene-CCO40_RS17425;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=CCO40_RS17425;old_locus_tag=CCO40_17425 NZ_CP075116.1 Protein Homology CDS 3603815 3605533 . + 0 ID=cds-WP_001260683.1;Parent=gene-CCO40_RS17425;Dbxref=GenBank:WP_001260683.1;Name=WP_001260683.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=CCO40_RS17425;product=proline--tRNA ligase;protein_id=WP_001260683.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3605607 3606308 . - . ID=gene-CCO40_RS17430;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=CCO40_RS17430;old_locus_tag=CCO40_17430 NZ_CP075116.1 Protein Homology CDS 3605607 3606308 . - 0 ID=cds-WP_000252580.1;Parent=gene-CCO40_RS17430;Dbxref=GenBank:WP_000252580.1;Name=WP_000252580.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006899150.1;locus_tag=CCO40_RS17430;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_000252580.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3606340 3606762 . - . ID=gene-CCO40_RS17435;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=CCO40_RS17435;old_locus_tag=CCO40_17435 NZ_CP075116.1 Protein Homology CDS 3606340 3606762 . - 0 ID=cds-WP_000560527.1;Parent=gene-CCO40_RS17435;Dbxref=GenBank:WP_000560527.1;Name=WP_000560527.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459245.1;locus_tag=CCO40_RS17435;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_000560527.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3606759 3607304 . - . ID=gene-CCO40_RS17440;Name=CCO40_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17440;old_locus_tag=CCO40_17440 NZ_CP075116.1 Protein Homology CDS 3606759 3607304 . - 0 ID=cds-WP_023243425.1;Parent=gene-CCO40_RS17440;Dbxref=GenBank:WP_023243425.1;Name=WP_023243425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459244.1;locus_tag=CCO40_RS17440;product=YaeQ family protein;protein_id=WP_023243425.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3607502 3607702 . + . ID=gene-CCO40_RS17445;Name=CCO40_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17445;old_locus_tag=CCO40_17445 NZ_CP075116.1 Protein Homology CDS 3607502 3607702 . + 0 ID=cds-WP_001518678.1;Parent=gene-CCO40_RS17445;Dbxref=GenBank:WP_001518678.1;Name=WP_001518678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=CCO40_RS17445;product=YaeP family protein;protein_id=WP_001518678.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3607689 3607949 . + . ID=gene-CCO40_RS17450;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=CCO40_RS17450;old_locus_tag=CCO40_17450 NZ_CP075116.1 Protein Homology CDS 3607689 3607949 . + 0 ID=cds-WP_000062330.1;Parent=gene-CCO40_RS17450;Dbxref=GenBank:WP_000062330.1;Name=WP_000062330.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=CCO40_RS17450;product=Rho-binding antiterminator;protein_id=WP_000062330.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3608033 3609325 . - . ID=gene-CCO40_RS17455;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=CCO40_RS17455;old_locus_tag=CCO40_17455 NZ_CP075116.1 Protein Homology CDS 3608033 3609325 . - 0 ID=cds-WP_094889017.1;Parent=gene-CCO40_RS17455;Dbxref=GenBank:WP_094889017.1;Name=WP_094889017.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459241.1;locus_tag=CCO40_RS17455;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_094889017.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3609388 3609777 . - . ID=gene-CCO40_RS17460;Name=CCO40_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17460;old_locus_tag=CCO40_17460 NZ_CP075116.1 Protein Homology CDS 3609388 3609777 . - 0 ID=cds-WP_000901088.1;Parent=gene-CCO40_RS17460;Dbxref=GenBank:WP_000901088.1;Name=WP_000901088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459240.1;locus_tag=CCO40_RS17460;product=VOC family protein;protein_id=WP_000901088.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3609833 3611974 . - . ID=gene-CCO40_RS17465;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=CCO40_RS17465;old_locus_tag=CCO40_17465 NZ_CP075116.1 Protein Homology CDS 3609833 3611974 . - 0 ID=cds-WP_094889018.1;Parent=gene-CCO40_RS17465;Dbxref=GenBank:WP_094889018.1;Name=WP_094889018.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459239.1;locus_tag=CCO40_RS17465;product=lysine decarboxylase LdcC;protein_id=WP_094889018.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3612050 3613813 . - . ID=gene-CCO40_RS17470;Name=CCO40_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17470;old_locus_tag=CCO40_17470 NZ_CP075116.1 Protein Homology CDS 3612050 3613813 . - 0 ID=cds-WP_000524168.1;Parent=gene-CCO40_RS17470;Dbxref=GenBank:WP_000524168.1;Name=WP_000524168.1;Ontology_term=GO:0006032,GO:0016998,GO:0004568;gbkey=CDS;go_function=chitinase activity|0004568||IEA;go_process=chitin catabolic process|0006032||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459238.1;locus_tag=CCO40_RS17470;product=chitinase;protein_id=WP_000524168.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3613993 3614952 . - . ID=gene-CCO40_RS17475;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=CCO40_RS17475;old_locus_tag=CCO40_17475 NZ_CP075116.1 Protein Homology CDS 3613993 3614952 . - 0 ID=cds-WP_000055753.1;Parent=gene-CCO40_RS17475;Dbxref=GenBank:WP_000055753.1;Name=WP_000055753.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=CCO40_RS17475;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055753.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3614965 3618447 . - . ID=gene-CCO40_RS17480;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=CCO40_RS17480;old_locus_tag=CCO40_17480 NZ_CP075116.1 Protein Homology CDS 3614965 3618447 . - 0 ID=cds-WP_023224203.1;Parent=gene-CCO40_RS17480;Dbxref=GenBank:WP_023224203.1;Name=WP_023224203.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459236.1;locus_tag=CCO40_RS17480;product=DNA polymerase III subunit alpha;protein_id=WP_023224203.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3618471 3619067 . - . ID=gene-CCO40_RS17485;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=CCO40_RS17485;old_locus_tag=CCO40_17485 NZ_CP075116.1 Protein Homology CDS 3618471 3619067 . - 0 ID=cds-WP_045341822.1;Parent=gene-CCO40_RS17485;Dbxref=GenBank:WP_045341822.1;Name=WP_045341822.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459235.1;locus_tag=CCO40_RS17485;product=ribonuclease HII;protein_id=WP_045341822.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3619064 3620212 . - . ID=gene-CCO40_RS17490;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=CCO40_RS17490;old_locus_tag=CCO40_17490 NZ_CP075116.1 Protein Homology CDS 3619064 3620212 . - 0 ID=cds-WP_000741216.1;Parent=gene-CCO40_RS17490;Dbxref=GenBank:WP_000741216.1;Name=WP_000741216.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459234.1;locus_tag=CCO40_RS17490;product=lipid-A-disaccharide synthase;protein_id=WP_000741216.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3620212 3621000 . - . ID=gene-CCO40_RS17495;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=CCO40_RS17495;old_locus_tag=CCO40_17495 NZ_CP075116.1 Protein Homology CDS 3620212 3621000 . - 0 ID=cds-WP_000565950.1;Parent=gene-CCO40_RS17495;Dbxref=GenBank:WP_000565950.1;Name=WP_000565950.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=CCO40_RS17495;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_000565950.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3621004 3621459 . - . ID=gene-CCO40_RS17500;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=CCO40_RS17500;old_locus_tag=CCO40_17500 NZ_CP075116.1 Protein Homology CDS 3621004 3621459 . - 0 ID=cds-WP_000210741.1;Parent=gene-CCO40_RS17500;Dbxref=GenBank:WP_000210741.1;Name=WP_000210741.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=CCO40_RS17500;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210741.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3621565 3622590 . - . ID=gene-CCO40_RS17505;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=CCO40_RS17505;old_locus_tag=CCO40_17505 NZ_CP075116.1 Protein Homology CDS 3621565 3622590 . - 0 ID=cds-WP_001139265.1;Parent=gene-CCO40_RS17505;Dbxref=GenBank:WP_001139265.1;Name=WP_001139265.1;Ontology_term=GO:0009245,GO:0016747;gbkey=CDS;gene=lpxD;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=CCO40_RS17505;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139265.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3622594 3623079 . - . ID=gene-CCO40_RS17510;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=CCO40_RS17510;old_locus_tag=CCO40_17510 NZ_CP075116.1 Protein Homology CDS 3622594 3623079 . - 0 ID=cds-WP_000758966.1;Parent=gene-CCO40_RS17510;Dbxref=GenBank:WP_000758966.1;Name=WP_000758966.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459230.1;locus_tag=CCO40_RS17510;product=molecular chaperone Skp;protein_id=WP_000758966.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3623202 3625634 . - . ID=gene-CCO40_RS17515;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=CCO40_RS17515;old_locus_tag=CCO40_17515 NZ_CP075116.1 Protein Homology CDS 3623202 3625634 . - 0 ID=cds-WP_001240931.1;Parent=gene-CCO40_RS17515;Dbxref=GenBank:WP_001240931.1;Name=WP_001240931.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308206.1;locus_tag=CCO40_RS17515;product=outer membrane protein assembly factor BamA;protein_id=WP_001240931.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3625666 3627018 . - . ID=gene-CCO40_RS17520;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=CCO40_RS17520;old_locus_tag=CCO40_17520 NZ_CP075116.1 Protein Homology CDS 3625666 3627018 . - 0 ID=cds-WP_000949017.1;Parent=gene-CCO40_RS17520;Dbxref=GenBank:WP_000949017.1;Name=WP_000949017.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=CCO40_RS17520;product=sigma E protease regulator RseP;protein_id=WP_000949017.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3627030 3627887 . - . ID=gene-CCO40_RS17525;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=CCO40_RS17525;old_locus_tag=CCO40_17525 NZ_CP075116.1 Protein Homology CDS 3627030 3627887 . - 0 ID=cds-WP_000922422.1;Parent=gene-CCO40_RS17525;Dbxref=GenBank:WP_000922422.1;Name=WP_000922422.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459227.1;locus_tag=CCO40_RS17525;product=phosphatidate cytidylyltransferase;protein_id=WP_000922422.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3627900 3628658 . - . ID=gene-CCO40_RS17530;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=CCO40_RS17530;old_locus_tag=CCO40_17530 NZ_CP075116.1 Protein Homology CDS 3627900 3628658 . - 0 ID=cds-WP_000947413.1;Parent=gene-CCO40_RS17530;Dbxref=GenBank:WP_000947413.1;Name=WP_000947413.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=CCO40_RS17530;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_000947413.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3628970 3630166 . - . ID=gene-CCO40_RS17535;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=CCO40_RS17535;old_locus_tag=CCO40_17535 NZ_CP075116.1 Protein Homology CDS 3628970 3630166 . - 0 ID=cds-WP_000811905.1;Parent=gene-CCO40_RS17535;Dbxref=GenBank:WP_000811905.1;Name=WP_000811905.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459225.1;locus_tag=CCO40_RS17535;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_000811905.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3630307 3630864 . - . ID=gene-CCO40_RS17540;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=CCO40_RS17540;old_locus_tag=CCO40_17540 NZ_CP075116.1 Protein Homology CDS 3630307 3630864 . - 0 ID=cds-WP_000622423.1;Parent=gene-CCO40_RS17540;Dbxref=GenBank:WP_000622423.1;Name=WP_000622423.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=CCO40_RS17540;product=ribosome recycling factor;protein_id=WP_000622423.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3631011 3631736 . - . ID=gene-CCO40_RS17545;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=CCO40_RS17545;old_locus_tag=CCO40_17545 NZ_CP075116.1 Protein Homology CDS 3631011 3631736 . - 0 ID=cds-WP_000224567.1;Parent=gene-CCO40_RS17545;Dbxref=GenBank:WP_000224567.1;Name=WP_000224567.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=CCO40_RS17545;product=UMP kinase;protein_id=WP_000224567.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3631881 3632732 . - . ID=gene-CCO40_RS17550;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=CCO40_RS17550;old_locus_tag=CCO40_17550 NZ_CP075116.1 Protein Homology CDS 3631881 3632732 . - 0 ID=cds-WP_000808106.1;Parent=gene-CCO40_RS17550;Dbxref=GenBank:WP_000808106.1;Name=WP_000808106.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=CCO40_RS17550;product=translation elongation factor Ts;protein_id=WP_000808106.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3632990 3633715 . - . ID=gene-CCO40_RS17555;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=CCO40_RS17555;old_locus_tag=CCO40_17555 NZ_CP075116.1 Protein Homology CDS 3632990 3633715 . - 0 ID=cds-WP_000246886.1;Parent=gene-CCO40_RS17555;Dbxref=GenBank:WP_000246886.1;Name=WP_000246886.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=CCO40_RS17555;product=30S ribosomal protein S2;protein_id=WP_000246886.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3634166 3634960 . + . ID=gene-CCO40_RS17560;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=CCO40_RS17560;old_locus_tag=CCO40_17560 NZ_CP075116.1 Protein Homology CDS 3634166 3634960 . + 0 ID=cds-WP_001018214.1;Parent=gene-CCO40_RS17560;Dbxref=GenBank:WP_001018214.1;Name=WP_001018214.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459220.1;locus_tag=CCO40_RS17560;product=type I methionyl aminopeptidase;protein_id=WP_001018214.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3635198 3637870 . + . ID=gene-CCO40_RS17565;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=CCO40_RS17565;old_locus_tag=CCO40_17565 NZ_CP075116.1 Protein Homology CDS 3635198 3637870 . + 0 ID=cds-WP_001094519.1;Parent=gene-CCO40_RS17565;Dbxref=GenBank:WP_001094519.1;Name=WP_001094519.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459219.1;locus_tag=CCO40_RS17565;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_001094519.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3637900 3638724 . + . ID=gene-CCO40_RS17570;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=CCO40_RS17570;old_locus_tag=CCO40_17570 NZ_CP075116.1 Protein Homology CDS 3637900 3638724 . + 0 ID=cds-WP_001186676.1;Parent=gene-CCO40_RS17570;Dbxref=GenBank:WP_001186676.1;Name=WP_001186676.1;Ontology_term=GO:0009085,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=CCO40_RS17570;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186676.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3638761 3640062 . - . ID=gene-CCO40_RS17575;Name=CCO40_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17575;old_locus_tag=CCO40_17575 NZ_CP075116.1 Protein Homology CDS 3638761 3640062 . - 0 ID=cds-WP_000017195.1;Parent=gene-CCO40_RS17575;Dbxref=GenBank:WP_000017195.1;Name=WP_000017195.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=CCO40_RS17575;product=MFS transporter;protein_id=WP_000017195.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3640309 3640695 . + . ID=gene-CCO40_RS17580;Name=CCO40_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17580;old_locus_tag=CCO40_17580 NZ_CP075116.1 Protein Homology CDS 3640309 3640695 . + 0 ID=cds-WP_000272193.1;Parent=gene-CCO40_RS17580;Dbxref=GenBank:WP_000272193.1;Name=WP_000272193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=CCO40_RS17580;product=DUF3461 family protein;protein_id=WP_000272193.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3640784 3641941 . - . ID=gene-CCO40_RS17585;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=CCO40_RS17585;old_locus_tag=CCO40_17585 NZ_CP075116.1 Protein Homology CDS 3640784 3641941 . - 0 ID=cds-WP_000929420.1;Parent=gene-CCO40_RS17585;Dbxref=GenBank:WP_000929420.1;Name=WP_000929420.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=CCO40_RS17585;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_000929420.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3642094 3643521 . - . ID=gene-CCO40_RS17590;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=CCO40_RS17590;old_locus_tag=CCO40_17590 NZ_CP075116.1 Protein Homology CDS 3642094 3643521 . - 0 ID=cds-WP_000753958.1;Parent=gene-CCO40_RS17590;Dbxref=GenBank:WP_000753958.1;Name=WP_000753958.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=CCO40_RS17590;product=serine endoprotease DegP;protein_id=WP_000753958.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3643651 3645168 . - . ID=gene-CCO40_RS17595;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=CCO40_RS17595;old_locus_tag=CCO40_17595 NZ_CP075116.1 Protein Homology CDS 3643651 3645168 . - 0 ID=cds-WP_000146450.1;Parent=gene-CCO40_RS17595;Dbxref=GenBank:WP_000146450.1;Name=WP_000146450.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459213.1;locus_tag=CCO40_RS17595;product=dGTPase;protein_id=WP_000146450.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3645253 3645951 . + . ID=gene-CCO40_RS17600;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=CCO40_RS17600;old_locus_tag=CCO40_17600 NZ_CP075116.1 Protein Homology CDS 3645253 3645951 . + 0 ID=cds-WP_000689824.1;Parent=gene-CCO40_RS17600;Dbxref=GenBank:WP_000689824.1;Name=WP_000689824.1;Ontology_term=GO:0009164,GO:0033353,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine cycle|0033353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459212.1;locus_tag=CCO40_RS17600;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689824.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3645944 3646744 . + . ID=gene-CCO40_RS17605;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=CCO40_RS17605;old_locus_tag=CCO40_17605 NZ_CP075116.1 Protein Homology CDS 3645944 3646744 . + 0 ID=cds-WP_001118838.1;Parent=gene-CCO40_RS17605;Dbxref=GenBank:WP_001118838.1;Name=WP_001118838.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=CCO40_RS17605;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_001118838.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3646781 3647404 . + . ID=gene-CCO40_RS17610;Name=CCO40_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17610;old_locus_tag=CCO40_17610 NZ_CP075116.1 Protein Homology CDS 3646781 3647404 . + 0 ID=cds-WP_000964234.1;Parent=gene-CCO40_RS17610;Dbxref=GenBank:WP_000964234.1;Name=WP_000964234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459210.1;locus_tag=CCO40_RS17610;product=TRIC cation channel family protein;protein_id=WP_000964234.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3647505 3647849 . - . ID=gene-CCO40_RS17615;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=CCO40_RS17615;old_locus_tag=CCO40_17615 NZ_CP075116.1 Protein Homology CDS 3647505 3647849 . - 0 ID=cds-WP_001278668.1;Parent=gene-CCO40_RS17615;Dbxref=GenBank:WP_001278668.1;Name=WP_001278668.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=CCO40_RS17615;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001278668.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3647931 3649352 . - . ID=gene-CCO40_RS17620;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=CCO40_RS17620;old_locus_tag=CCO40_17620 NZ_CP075116.1 Protein Homology CDS 3647931 3649352 . - 0 ID=cds-WP_000845426.1;Parent=gene-CCO40_RS17620;Dbxref=GenBank:WP_000845426.1;Name=WP_000845426.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=CCO40_RS17620;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_000845426.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3649522 3650802 . + . ID=gene-CCO40_RS17625;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=CCO40_RS17625;old_locus_tag=CCO40_17625 NZ_CP075116.1 Protein Homology CDS 3649522 3650802 . + 0 ID=cds-WP_000045248.1;Parent=gene-CCO40_RS17625;Dbxref=GenBank:WP_000045248.1;Name=WP_000045248.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=CCO40_RS17625;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_000045248.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3650910 3651749 . - . ID=gene-CCO40_RS17630;Name=stfH;gbkey=Gene;gene=stfH;gene_biotype=protein_coding;locus_tag=CCO40_RS17630;old_locus_tag=CCO40_17630 NZ_CP075116.1 Protein Homology CDS 3650910 3651749 . - 0 ID=cds-WP_023228929.1;Parent=gene-CCO40_RS17630;Dbxref=GenBank:WP_023228929.1;Name=WP_023228929.1;gbkey=CDS;gene=stfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459206.1;locus_tag=CCO40_RS17630;product=fimbrial adhesin StfH;protein_id=WP_023228929.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3651749 3652279 . - . ID=gene-CCO40_RS17635;Name=CCO40_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17635;old_locus_tag=CCO40_17635 NZ_CP075116.1 Protein Homology CDS 3651749 3652279 . - 0 ID=cds-WP_001129315.1;Parent=gene-CCO40_RS17635;Dbxref=GenBank:WP_001129315.1;Name=WP_001129315.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459205.1;locus_tag=CCO40_RS17635;product=fimbrial protein;protein_id=WP_001129315.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3652279 3652755 . - . ID=gene-CCO40_RS17640;Name=stfF;gbkey=Gene;gene=stfF;gene_biotype=protein_coding;locus_tag=CCO40_RS17640;old_locus_tag=CCO40_17640 NZ_CP075116.1 Protein Homology CDS 3652279 3652755 . - 0 ID=cds-WP_031605879.1;Parent=gene-CCO40_RS17640;Dbxref=GenBank:WP_031605879.1;Name=WP_031605879.1;gbkey=CDS;gene=stfF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000725047.1;locus_tag=CCO40_RS17640;product=fimbrial minor subunit StfF;protein_id=WP_031605879.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3652752 3653264 . - . ID=gene-CCO40_RS17645;Name=CCO40_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17645;old_locus_tag=CCO40_17645 NZ_CP075116.1 Protein Homology CDS 3652752 3653264 . - 0 ID=cds-WP_001250313.1;Parent=gene-CCO40_RS17645;Dbxref=GenBank:WP_001250313.1;Name=WP_001250313.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459203.1;locus_tag=CCO40_RS17645;product=fimbrial protein;protein_id=WP_001250313.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3653283 3654035 . - . ID=gene-CCO40_RS17650;Name=stfD;gbkey=Gene;gene=stfD;gene_biotype=protein_coding;locus_tag=CCO40_RS17650;old_locus_tag=CCO40_17650 NZ_CP075116.1 Protein Homology CDS 3653283 3654035 . - 0 ID=cds-WP_094889019.1;Parent=gene-CCO40_RS17650;Dbxref=GenBank:WP_094889019.1;Name=WP_094889019.1;gbkey=CDS;gene=stfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459202.1;locus_tag=CCO40_RS17650;product=fimbrial chaperone StfD;protein_id=WP_094889019.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3654053 3656710 . - . ID=gene-CCO40_RS17655;Name=CCO40_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17655;old_locus_tag=CCO40_17655 NZ_CP075116.1 Protein Homology CDS 3654053 3656710 . - 0 ID=cds-WP_094889020.1;Parent=gene-CCO40_RS17655;Dbxref=GenBank:WP_094889020.1;Name=WP_094889020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459201.1;locus_tag=CCO40_RS17655;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_094889020.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3656796 3657356 . - . ID=gene-CCO40_RS17660;Name=CCO40_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17660;old_locus_tag=CCO40_17660 NZ_CP075116.1 Protein Homology CDS 3656796 3657356 . - 0 ID=cds-WP_001090554.1;Parent=gene-CCO40_RS17660;Dbxref=GenBank:WP_001090554.1;Name=WP_001090554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459200.1;locus_tag=CCO40_RS17660;product=Stf fimbria major subunit StfA;protein_id=WP_001090554.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3658295 3660334 . - . ID=gene-CCO40_RS17665;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=CCO40_RS17665;old_locus_tag=CCO40_17665 NZ_CP075116.1 Protein Homology CDS 3658295 3660334 . - 0 ID=cds-WP_094889021.1;Parent=gene-CCO40_RS17665;Dbxref=GenBank:WP_094889021.1;Name=WP_094889021.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=CCO40_RS17665;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_094889021.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3660349 3661239 . - . ID=gene-CCO40_RS17670;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=CCO40_RS17670;old_locus_tag=CCO40_17670 NZ_CP075116.1 Protein Homology CDS 3660349 3661239 . - 0 ID=cds-WP_001205359.1;Parent=gene-CCO40_RS17670;Dbxref=GenBank:WP_001205359.1;Name=WP_001205359.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459198.1;locus_tag=CCO40_RS17670;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_001205359.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3661239 3662036 . - . ID=gene-CCO40_RS17675;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=CCO40_RS17675;old_locus_tag=CCO40_17675 NZ_CP075116.1 Protein Homology CDS 3661239 3662036 . - 0 ID=cds-WP_094889022.1;Parent=gene-CCO40_RS17675;Dbxref=GenBank:WP_094889022.1;Name=WP_094889022.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459197.1;locus_tag=CCO40_RS17675;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_094889022.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3662085 3664274 . - . ID=gene-CCO40_RS17680;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;gene_synonym=tonA;locus_tag=CCO40_RS17680;old_locus_tag=CCO40_17680 NZ_CP075116.1 Protein Homology CDS 3662085 3664274 . - 0 ID=cds-WP_000113219.1;Parent=gene-CCO40_RS17680;Dbxref=GenBank:WP_000113219.1;Name=WP_000113219.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459196.1;locus_tag=CCO40_RS17680;product=ferrichrome porin FhuA;protein_id=WP_000113219.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3664567 3667089 . - . ID=gene-CCO40_RS17685;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=CCO40_RS17685;old_locus_tag=CCO40_17685 NZ_CP075116.1 Protein Homology CDS 3664567 3667089 . - 0 ID=cds-WP_094889023.1;Parent=gene-CCO40_RS17685;Dbxref=GenBank:WP_094889023.1;Name=WP_094889023.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=CCO40_RS17685;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_094889023.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3667230 3669659 . - . ID=gene-CCO40_RS17690;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=CCO40_RS17690;old_locus_tag=CCO40_17690 NZ_CP075116.1 Protein Homology CDS 3667230 3669659 . - 0 ID=cds-WP_170930889.1;Parent=gene-CCO40_RS17690;Dbxref=GenBank:WP_170930889.1;Name=WP_170930889.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414690.4;locus_tag=CCO40_RS17690;product=ATP-dependent helicase HrpB;protein_id=WP_170930889.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3669732 3670262 . + . ID=gene-CCO40_RS17695;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=CCO40_RS17695;old_locus_tag=CCO40_17695 NZ_CP075116.1 Protein Homology CDS 3669732 3670262 . + 0 ID=cds-WP_001294175.1;Parent=gene-CCO40_RS17695;Dbxref=GenBank:WP_001294175.1;Name=WP_001294175.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459193.1;locus_tag=CCO40_RS17695;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_001294175.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3670279 3670983 . + . ID=gene-CCO40_RS17700;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=CCO40_RS17700;old_locus_tag=CCO40_17700 NZ_CP075116.1 Protein Homology CDS 3670279 3670983 . + 0 ID=cds-WP_000899408.1;Parent=gene-CCO40_RS17700;Dbxref=GenBank:WP_000899408.1;Name=WP_000899408.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=CCO40_RS17700;product=DNA/RNA nuclease SfsA;protein_id=WP_000899408.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3671160 3671615 . + . ID=gene-CCO40_RS17705;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=CCO40_RS17705;old_locus_tag=CCO40_17705 NZ_CP075116.1 Protein Homology CDS 3671160 3671615 . + 0 ID=cds-WP_001155232.1;Parent=gene-CCO40_RS17705;Dbxref=GenBank:WP_001155232.1;Name=WP_001155232.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=CCO40_RS17705;product=RNA polymerase-binding protein DksA;protein_id=WP_001155232.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3671684 3672580 . + . ID=gene-CCO40_RS17710;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=CCO40_RS17710;old_locus_tag=CCO40_17710 NZ_CP075116.1 Protein Homology CDS 3671684 3672580 . + 0 ID=cds-WP_094889058.1;Parent=gene-CCO40_RS17710;Dbxref=GenBank:WP_094889058.1;Name=WP_094889058.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549989.1;locus_tag=CCO40_RS17710;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_094889058.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3672742 3674139 . + . ID=gene-CCO40_RS17715;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=CCO40_RS17715;old_locus_tag=CCO40_17715 NZ_CP075116.1 Protein Homology CDS 3672742 3674139 . + 0 ID=cds-WP_204368846.1;Parent=gene-CCO40_RS17715;Dbxref=GenBank:WP_204368846.1;Name=WP_204368846.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=CCO40_RS17715;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_204368846.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3674136 3674615 . + . ID=gene-CCO40_RS17720;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=CCO40_RS17720;old_locus_tag=CCO40_17720 NZ_CP075116.1 Protein Homology CDS 3674136 3674615 . + 0 ID=cds-WP_080232352.1;Parent=gene-CCO40_RS17720;Dbxref=GenBank:WP_080232352.1;Name=WP_080232352.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459188.1;locus_tag=CCO40_RS17720;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_080232352.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3674736 3675527 . + . ID=gene-CCO40_RS17725;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=CCO40_RS17725;old_locus_tag=CCO40_17725 NZ_CP075116.1 Protein Homology CDS 3674736 3675527 . + 0 ID=cds-WP_023993177.1;Parent=gene-CCO40_RS17725;Dbxref=GenBank:WP_023993177.1;Name=WP_023993177.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=CCO40_RS17725;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_023993177.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3675653 3676507 . + . ID=gene-CCO40_RS17730;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=CCO40_RS17730;old_locus_tag=CCO40_17730 NZ_CP075116.1 Protein Homology CDS 3675653 3676507 . + 0 ID=cds-WP_000905349.1;Parent=gene-CCO40_RS17730;Dbxref=GenBank:WP_000905349.1;Name=WP_000905349.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459186.1;locus_tag=CCO40_RS17730;product=pantoate--beta-alanine ligase;protein_id=WP_000905349.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3676602 3676982 . + . ID=gene-CCO40_RS17735;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=CCO40_RS17735;old_locus_tag=CCO40_17735 NZ_CP075116.1 Protein Homology CDS 3676602 3676982 . + 0 ID=cds-WP_000621526.1;Parent=gene-CCO40_RS17735;Dbxref=GenBank:WP_000621526.1;Name=WP_000621526.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=CCO40_RS17735;product=aspartate 1-decarboxylase;protein_id=WP_000621526.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3677259 3677864 . + . ID=gene-CCO40_RS17740;Name=stkA;gbkey=Gene;gene=stkA;gene_biotype=protein_coding;locus_tag=CCO40_RS17740;old_locus_tag=CCO40_17740 NZ_CP075116.1 Protein Homology CDS 3677259 3677864 . + 0 ID=cds-WP_094889025.1;Parent=gene-CCO40_RS17740;Dbxref=GenBank:WP_094889025.1;Name=WP_094889025.1;gbkey=CDS;gene=stkA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000466117.1;locus_tag=CCO40_RS17740;product=Stk fimbria major subunit StkA;protein_id=WP_094889025.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3677951 3678703 . + . ID=gene-CCO40_RS17745;Name=CCO40_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17745;old_locus_tag=CCO40_17745 NZ_CP075116.1 Protein Homology CDS 3677951 3678703 . + 0 ID=cds-WP_017441535.1;Parent=gene-CCO40_RS17745;Dbxref=GenBank:WP_017441535.1;Name=WP_017441535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000248438.1;locus_tag=CCO40_RS17745;product=fimbrial chaperone;protein_id=WP_017441535.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3678771 3681368 . + . ID=gene-CCO40_RS17750;Name=CCO40_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17750;old_locus_tag=CCO40_17750 NZ_CP075116.1 Protein Homology CDS 3678771 3681368 . + 0 ID=cds-WP_094889026.1;Parent=gene-CCO40_RS17750;Dbxref=GenBank:WP_094889026.1;Name=WP_094889026.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441536.1;locus_tag=CCO40_RS17750;product=outer membrane usher protein;protein_id=WP_094889026.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3681391 3681975 . + . ID=gene-CCO40_RS17755;Name=CCO40_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17755;old_locus_tag=CCO40_17755 NZ_CP075116.1 Protein Homology CDS 3681391 3681975 . + 0 ID=cds-WP_020839574.1;Parent=gene-CCO40_RS17755;Dbxref=GenBank:WP_020839574.1;Name=WP_020839574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001267117.1;locus_tag=CCO40_RS17755;product=fimbrial protein;protein_id=WP_020839574.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3682002 3682559 . + . ID=gene-CCO40_RS17760;Name=CCO40_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17760;old_locus_tag=CCO40_17760 NZ_CP075116.1 Protein Homology CDS 3682002 3682559 . + 0 ID=cds-WP_020839575.1;Parent=gene-CCO40_RS17760;Dbxref=GenBank:WP_020839575.1;Name=WP_020839575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504756.1;locus_tag=CCO40_RS17760;product=fimbrial protein;protein_id=WP_020839575.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3682578 3683177 . + . ID=gene-CCO40_RS17765;Name=CCO40_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17765;old_locus_tag=CCO40_17765 NZ_CP075116.1 Protein Homology CDS 3682578 3683177 . + 0 ID=cds-WP_001186615.1;Parent=gene-CCO40_RS17765;Dbxref=GenBank:WP_001186615.1;Name=WP_001186615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001186618.1;locus_tag=CCO40_RS17765;product=fimbrial-like protein;protein_id=WP_001186615.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3683189 3684250 . + . ID=gene-CCO40_RS17770;Name=CCO40_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17770;old_locus_tag=CCO40_17770 NZ_CP075116.1 Protein Homology CDS 3683189 3684250 . + 0 ID=cds-WP_023237301.1;Parent=gene-CCO40_RS17770;Dbxref=GenBank:WP_023237301.1;Name=WP_023237301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506595.1;locus_tag=CCO40_RS17770;product=fimbrial protein StkG;protein_id=WP_023237301.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3684252 3685481 . - . ID=gene-CCO40_RS17775;Name=CCO40_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17775;old_locus_tag=CCO40_17775 NZ_CP075116.1 Protein Homology CDS 3684252 3685481 . - 0 ID=cds-WP_024148869.1;Parent=gene-CCO40_RS17775;Dbxref=GenBank:WP_024148869.1;Name=WP_024148869.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=CCO40_RS17775;product=polysaccharide deacetylase family protein;protein_id=WP_024148869.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3685543 3685983 . - . ID=gene-CCO40_RS17780;Name=CCO40_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17780;old_locus_tag=CCO40_17780 NZ_CP075116.1 Protein Homology CDS 3685543 3685983 . - 0 ID=cds-WP_000901960.1;Parent=gene-CCO40_RS17780;Dbxref=GenBank:WP_000901960.1;Name=WP_000901960.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459183.1;locus_tag=CCO40_RS17780;product=PTS sugar transporter subunit IIA;protein_id=WP_000901960.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3686353 3686892 . + . ID=gene-CCO40_RS17785;Name=stiA;gbkey=Gene;gene=stiA;gene_biotype=protein_coding;locus_tag=CCO40_RS17785;old_locus_tag=CCO40_17785 NZ_CP075116.1 Protein Homology CDS 3686353 3686892 . + 0 ID=cds-WP_000777532.1;Parent=gene-CCO40_RS17785;Dbxref=GenBank:WP_000777532.1;Name=WP_000777532.1;gbkey=CDS;gene=stiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459182.1;locus_tag=CCO40_RS17785;product=Sti fimbria major subunit StiA;protein_id=WP_000777532.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3686939 3687622 . + . ID=gene-CCO40_RS17790;Name=stiB;gbkey=Gene;gene=stiB;gene_biotype=protein_coding;locus_tag=CCO40_RS17790;old_locus_tag=CCO40_17790 NZ_CP075116.1 Protein Homology CDS 3686939 3687622 . + 0 ID=cds-WP_001086413.1;Parent=gene-CCO40_RS17790;Dbxref=GenBank:WP_001086413.1;Name=WP_001086413.1;gbkey=CDS;gene=stiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459181.1;locus_tag=CCO40_RS17790;product=fimbrial biogenesis chaperone StiB;protein_id=WP_001086413.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3687649 3690195 . + . ID=gene-CCO40_RS17795;Name=CCO40_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17795;old_locus_tag=CCO40_17795 NZ_CP075116.1 Protein Homology CDS 3687649 3690195 . + 0 ID=cds-WP_094889027.1;Parent=gene-CCO40_RS17795;Dbxref=GenBank:WP_094889027.1;Name=WP_094889027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459180.1;locus_tag=CCO40_RS17795;product=fimbrial outer membrane usher protein;protein_id=WP_094889027.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3690204 3691283 . + . ID=gene-CCO40_RS17800;Name=CCO40_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17800;old_locus_tag=CCO40_17800 NZ_CP075116.1 Protein Homology CDS 3690204 3691283 . + 0 ID=cds-WP_000794042.1;Parent=gene-CCO40_RS17800;Dbxref=GenBank:WP_000794042.1;Name=WP_000794042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459179.1;locus_tag=CCO40_RS17800;product=fimbrial protein;protein_id=WP_000794042.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3691405 3692175 . - . ID=gene-CCO40_RS17805;Name=CCO40_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17805;old_locus_tag=CCO40_17805 NZ_CP075116.1 Protein Homology CDS 3691405 3692175 . - 0 ID=cds-WP_000983418.1;Parent=gene-CCO40_RS17805;Dbxref=GenBank:WP_000983418.1;Name=WP_000983418.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=CCO40_RS17805;product=ABC transporter permease;protein_id=WP_000983418.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3692172 3693098 . - . ID=gene-CCO40_RS17810;Name=CCO40_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17810;old_locus_tag=CCO40_17810 NZ_CP075116.1 Protein Homology CDS 3692172 3693098 . - 0 ID=cds-WP_000150628.1;Parent=gene-CCO40_RS17810;Dbxref=GenBank:WP_000150628.1;Name=WP_000150628.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=CCO40_RS17810;product=ABC transporter ATP-binding protein;protein_id=WP_000150628.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3693207 3693869 . + . ID=gene-CCO40_RS17815;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=CCO40_RS17815;old_locus_tag=CCO40_17815 NZ_CP075116.1 Protein Homology CDS 3693207 3693869 . + 0 ID=cds-WP_000651591.1;Parent=gene-CCO40_RS17815;Dbxref=GenBank:WP_000651591.1;Name=WP_000651591.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=CCO40_RS17815;product=carbonate dehydratase;protein_id=WP_000651591.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3693927 3694463 . - . ID=gene-CCO40_RS17820;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=CCO40_RS17820;old_locus_tag=CCO40_17820 NZ_CP075116.1 Protein Homology CDS 3693927 3694463 . - 0 ID=cds-WP_000683342.1;Parent=gene-CCO40_RS17820;Dbxref=GenBank:WP_000683342.1;Name=WP_000683342.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=CCO40_RS17820;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683342.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3694669 3697059 . + . ID=gene-CCO40_RS17825;Name=CCO40_RS17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17825;old_locus_tag=CCO40_17825 NZ_CP075116.1 Protein Homology CDS 3694669 3697059 . + 0 ID=cds-WP_058805593.1;Parent=gene-CCO40_RS17825;Dbxref=GenBank:WP_058805593.1;Name=WP_058805593.1;Ontology_term=GO:0016614,GO:0048038,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=CCO40_RS17825;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;protein_id=WP_058805593.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3697137 3698747 . - . ID=gene-CCO40_RS17830;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=CCO40_RS17830;old_locus_tag=CCO40_17830 NZ_CP075116.1 Protein Homology CDS 3697137 3698747 . - 0 ID=cds-WP_000946046.1;Parent=gene-CCO40_RS17830;Dbxref=GenBank:WP_000946046.1;Name=WP_000946046.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459173.1;locus_tag=CCO40_RS17830;product=multicopper oxidase CueO;protein_id=WP_000946046.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3698949 3699296 . + . ID=gene-CCO40_RS17835;Name=CCO40_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17835;old_locus_tag=CCO40_17835 NZ_CP075116.1 Protein Homology CDS 3698949 3699296 . + 0 ID=cds-WP_000846613.1;Parent=gene-CCO40_RS17835;Dbxref=GenBank:WP_000846613.1;Name=WP_000846613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=CCO40_RS17835;product=YacC family pilotin-like protein;protein_id=WP_000846613.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3699403 3700263 . + . ID=gene-CCO40_RS17840;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=CCO40_RS17840;old_locus_tag=CCO40_17840 NZ_CP075116.1 Protein Homology CDS 3699403 3700263 . + 0 ID=cds-WP_000829968.1;Parent=gene-CCO40_RS17840;Dbxref=GenBank:WP_000829968.1;Name=WP_000829968.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459171.1;locus_tag=CCO40_RS17840;product=polyamine aminopropyltransferase;protein_id=WP_000829968.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3700284 3701078 . + . ID=gene-CCO40_RS17845;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=CCO40_RS17845;old_locus_tag=CCO40_17845 NZ_CP075116.1 Protein Homology CDS 3700284 3701078 . + 0 ID=cds-WP_000734293.1;Parent=gene-CCO40_RS17845;Dbxref=GenBank:WP_000734293.1;Name=WP_000734293.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459170.1;locus_tag=CCO40_RS17845;product=adenosylmethionine decarboxylase;protein_id=WP_000734293.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3701108 3701875 . - . ID=gene-CCO40_RS17850;Name=CCO40_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17850;old_locus_tag=CCO40_17850 NZ_CP075116.1 Protein Homology CDS 3701108 3701875 . - 0 ID=cds-WP_000678253.1;Parent=gene-CCO40_RS17850;Dbxref=GenBank:WP_000678253.1;Name=WP_000678253.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459169.1;locus_tag=CCO40_RS17850;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000678253.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3701885 3702868 . - . ID=gene-CCO40_RS17855;Name=CCO40_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17855;old_locus_tag=CCO40_17855 NZ_CP075116.1 Protein Homology CDS 3701885 3702868 . - 0 ID=cds-WP_000448745.1;Parent=gene-CCO40_RS17855;Dbxref=GenBank:WP_000448745.1;Name=WP_000448745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=CCO40_RS17855;product=D-threonate 4-phosphate dehydrogenase;protein_id=WP_000448745.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3702858 3704129 . - . ID=gene-CCO40_RS17860;Name=dtnK;gbkey=Gene;gene=dtnK;gene_biotype=protein_coding;locus_tag=CCO40_RS17860;old_locus_tag=CCO40_17860 NZ_CP075116.1 Protein Homology CDS 3702858 3704129 . - 0 ID=cds-WP_094889028.1;Parent=gene-CCO40_RS17860;Dbxref=GenBank:WP_094889028.1;Name=WP_094889028.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;gene=dtnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=CCO40_RS17860;product=D-threonate kinase;protein_id=WP_094889028.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3704126 3705079 . - . ID=gene-CCO40_RS17865;Name=CCO40_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17865;old_locus_tag=CCO40_17865 NZ_CP075116.1 Protein Homology CDS 3704126 3705079 . - 0 ID=cds-WP_001022089.1;Parent=gene-CCO40_RS17865;Dbxref=GenBank:WP_001022089.1;Name=WP_001022089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459166.1;locus_tag=CCO40_RS17865;product=2-keto-3-deoxygluconate permease 1;protein_id=WP_001022089.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3705315 3705677 . - . ID=gene-CCO40_RS17870;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=CCO40_RS17870;old_locus_tag=CCO40_17870 NZ_CP075116.1 Protein Homology CDS 3705315 3705677 . - 0 ID=cds-WP_000384308.1;Parent=gene-CCO40_RS17870;Dbxref=GenBank:WP_000384308.1;Name=WP_000384308.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=CCO40_RS17870;product=protein YacL;protein_id=WP_000384308.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3705948 3706271 . + . ID=gene-CCO40_RS17875;Name=CCO40_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17875;old_locus_tag=CCO40_17875 NZ_CP075116.1 Protein Homology CDS 3705948 3706271 . + 0 ID=cds-WP_001101536.1;Parent=gene-CCO40_RS17875;Dbxref=GenBank:WP_001101536.1;Name=WP_001101536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101536.1;locus_tag=CCO40_RS17875;product=low molecular weight protein tyrosine phosphatase family protein;protein_id=WP_001101536.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3706681 3707145 . + . ID=gene-CCO40_RS17880;Name=cbrB;gbkey=Gene;gene=cbrB;gene_biotype=protein_coding;gene_synonym=yieI;locus_tag=CCO40_RS17880;old_locus_tag=CCO40_17880 NZ_CP075116.1 Protein Homology CDS 3706681 3707145 . + 0 ID=cds-WP_000110442.1;Parent=gene-CCO40_RS17880;Dbxref=GenBank:WP_000110442.1;Name=WP_000110442.1;gbkey=CDS;gene=cbrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110434.1;locus_tag=CCO40_RS17880;product=inner membrane protein CbrB;protein_id=WP_000110442.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3707185 3709782 . - . ID=gene-CCO40_RS17885;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=CCO40_RS17885;old_locus_tag=CCO40_17885 NZ_CP075116.1 Protein Homology CDS 3707185 3709782 . - 0 ID=cds-WP_021294366.1;Parent=gene-CCO40_RS17885;Dbxref=GenBank:WP_021294366.1;Name=WP_021294366.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=CCO40_RS17885;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_021294366.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3710171 3711793 . + . ID=gene-CCO40_RS17890;Name=CCO40_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17890;old_locus_tag=CCO40_17890 NZ_CP075116.1 Protein Homology CDS 3710171 3711793 . + 0 ID=cds-WP_021294367.1;Parent=gene-CCO40_RS17890;Dbxref=GenBank:WP_021294367.1;Name=WP_021294367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459162.2;locus_tag=CCO40_RS17890;product=DUF3300 domain-containing protein;protein_id=WP_021294367.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3711806 3712597 . + . ID=gene-CCO40_RS17895;Name=CCO40_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17895;old_locus_tag=CCO40_17895 NZ_CP075116.1 Protein Homology CDS 3711806 3712597 . + 0 ID=cds-WP_023255795.1;Parent=gene-CCO40_RS17895;Dbxref=GenBank:WP_023255795.1;Name=WP_023255795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459161.1;locus_tag=CCO40_RS17895;product=DUF2950 family protein;protein_id=WP_023255795.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3712635 3712919 . - . ID=gene-CCO40_RS17900;Name=CCO40_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17900;old_locus_tag=CCO40_17900 NZ_CP075116.1 Protein Homology CDS 3712635 3712919 . - 0 ID=cds-WP_000765363.1;Parent=gene-CCO40_RS17900;Dbxref=GenBank:WP_000765363.1;Name=WP_000765363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459160.1;locus_tag=CCO40_RS17900;product=outer membrane protein;protein_id=WP_000765363.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3713208 3714632 . - . ID=gene-CCO40_RS17905;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=CCO40_RS17905;old_locus_tag=CCO40_17905 NZ_CP075116.1 Protein Homology CDS 3713208 3714632 . - 0 ID=cds-WP_001519338.1;Parent=gene-CCO40_RS17905;Dbxref=GenBank:WP_001519338.1;Name=WP_001519338.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=CCO40_RS17905;product=dihydrolipoyl dehydrogenase;protein_id=WP_001519338.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3714833 3716716 . - . ID=gene-CCO40_RS17910;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=CCO40_RS17910;old_locus_tag=CCO40_17910 NZ_CP075116.1 Protein Homology CDS 3714833 3716716 . - 0 ID=cds-WP_023240021.1;Parent=gene-CCO40_RS17910;Dbxref=GenBank:WP_023240021.1;Name=WP_023240021.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459158.2;locus_tag=CCO40_RS17910;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_023240021.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3716731 3719394 . - . ID=gene-CCO40_RS17915;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=CCO40_RS17915;old_locus_tag=CCO40_17915 NZ_CP075116.1 Protein Homology CDS 3716731 3719394 . - 0 ID=cds-WP_000003853.1;Parent=gene-CCO40_RS17915;Dbxref=GenBank:WP_000003853.1;Name=WP_000003853.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=CCO40_RS17915;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_000003853.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3719701 3720465 . - . ID=gene-CCO40_RS17920;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=CCO40_RS17920;old_locus_tag=CCO40_17920 NZ_CP075116.1 Protein Homology CDS 3719701 3720465 . - 0 ID=cds-WP_000331771.1;Parent=gene-CCO40_RS17920;Dbxref=GenBank:WP_000331771.1;Name=WP_000331771.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459156.1;locus_tag=CCO40_RS17920;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331771.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3721028 3722401 . + . ID=gene-CCO40_RS17925;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=CCO40_RS17925;old_locus_tag=CCO40_17925 NZ_CP075116.1 Protein Homology CDS 3721028 3722401 . + 0 ID=cds-WP_094445120.1;Parent=gene-CCO40_RS17925;Dbxref=GenBank:WP_094445120.1;Name=WP_094445120.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459155.1;locus_tag=CCO40_RS17925;product=aromatic amino acid transporter AroP;protein_id=WP_094445120.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3722565 3723971 . + . ID=gene-CCO40_RS17930;Name=CCO40_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17930;old_locus_tag=CCO40_17930 NZ_CP075116.1 Protein Homology CDS 3722565 3723971 . + 0 ID=cds-WP_000357539.1;Parent=gene-CCO40_RS17930;Dbxref=GenBank:WP_000357539.1;Name=WP_000357539.1;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=monoatomic cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=CCO40_RS17930;product=glycoside-pentoside-hexuronide (GPH):cation symporter;protein_id=WP_000357539.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3723971 3724921 . + . ID=gene-CCO40_RS17935;Name=CCO40_RS17935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17935;old_locus_tag=CCO40_17935 NZ_CP075116.1 Protein Homology CDS 3723971 3724921 . + 0 ID=cds-WP_076937524.1;Parent=gene-CCO40_RS17935;Dbxref=GenBank:WP_076937524.1;Name=WP_076937524.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459153.1;locus_tag=CCO40_RS17935;product=glycoside hydrolase family 43 protein;protein_id=WP_076937524.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3725013 3725867 . - . ID=gene-CCO40_RS17940;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=CCO40_RS17940;old_locus_tag=CCO40_17940 NZ_CP075116.1 Protein Homology CDS 3725013 3725867 . - 0 ID=cds-WP_000172039.1;Parent=gene-CCO40_RS17940;Dbxref=GenBank:WP_000172039.1;Name=WP_000172039.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=CCO40_RS17940;product=beta-lactamase regulator AmpE;protein_id=WP_000172039.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3725864 3726427 . - . ID=gene-CCO40_RS17945;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=CCO40_RS17945;old_locus_tag=CCO40_17945 NZ_CP075116.1 Protein Homology CDS 3725864 3726427 . - 0 ID=cds-WP_000936329.1;Parent=gene-CCO40_RS17945;Dbxref=GenBank:WP_000936329.1;Name=WP_000936329.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459151.1;locus_tag=CCO40_RS17945;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000936329.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3726515 3727408 . + . ID=gene-CCO40_RS17950;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=CCO40_RS17950;old_locus_tag=CCO40_17950 NZ_CP075116.1 Protein Homology CDS 3726515 3727408 . + 0 ID=cds-WP_020437940.1;Parent=gene-CCO40_RS17950;Dbxref=GenBank:WP_020437940.1;Name=WP_020437940.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459150.1;locus_tag=CCO40_RS17950;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_020437940.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3727630 3728067 . + . ID=gene-CCO40_RS17955;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=CCO40_RS17955;old_locus_tag=CCO40_17955 NZ_CP075116.1 Protein Homology CDS 3727630 3728067 . + 0 ID=cds-WP_000414989.1;Parent=gene-CCO40_RS17955;Dbxref=GenBank:WP_000414989.1;Name=WP_000414989.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459149.1;locus_tag=CCO40_RS17955;product=prepilin peptidase-dependent pilin;protein_id=WP_000414989.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3728077 3729462 . + . ID=gene-CCO40_RS17960;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=CCO40_RS17960;old_locus_tag=CCO40_17960 NZ_CP075116.1 Protein Homology CDS 3728077 3729462 . + 0 ID=cds-WP_080083417.1;Parent=gene-CCO40_RS17960;Dbxref=GenBank:WP_080083417.1;Name=WP_080083417.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459148.1;locus_tag=CCO40_RS17960;product=type II secretion system protein GspE;protein_id=WP_080083417.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3729452 3730654 . + . ID=gene-CCO40_RS17965;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=CCO40_RS17965;old_locus_tag=CCO40_17965 NZ_CP075116.1 Protein Homology CDS 3729452 3730654 . + 0 ID=cds-WP_000114101.1;Parent=gene-CCO40_RS17965;Dbxref=GenBank:WP_000114101.1;Name=WP_000114101.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459147.1;locus_tag=CCO40_RS17965;product=protein transport protein HofC;protein_id=WP_000114101.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3730685 3731728 . - . ID=gene-CCO40_RS17970;Name=CCO40_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS17970;old_locus_tag=CCO40_17970 NZ_CP075116.1 Protein Homology CDS 3730685 3731728 . - 0 ID=cds-WP_001217365.1;Parent=gene-CCO40_RS17970;Dbxref=GenBank:WP_001217365.1;Name=WP_001217365.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=CCO40_RS17970;product=GMP reductase;protein_id=WP_001217365.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3731954 3732574 . + . ID=gene-CCO40_RS17975;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=CCO40_RS17975;old_locus_tag=CCO40_17975 NZ_CP075116.1 Protein Homology CDS 3731954 3732574 . + 0 ID=cds-WP_001270913.1;Parent=gene-CCO40_RS17975;Dbxref=GenBank:WP_001270913.1;Name=WP_001270913.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459145.1;locus_tag=CCO40_RS17975;product=dephospho-CoA kinase;protein_id=WP_001270913.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3732574 3733317 . + . ID=gene-CCO40_RS17980;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=CCO40_RS17980;old_locus_tag=CCO40_17980 NZ_CP075116.1 Protein Homology CDS 3732574 3733317 . + 0 ID=cds-WP_000557441.1;Parent=gene-CCO40_RS17980;Dbxref=GenBank:WP_000557441.1;Name=WP_000557441.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459144.1;locus_tag=CCO40_RS17980;product=cell division protein ZapD;protein_id=WP_000557441.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3733327 3733518 . + . ID=gene-CCO40_RS17985;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=CCO40_RS17985;old_locus_tag=CCO40_17985 NZ_CP075116.1 Protein Homology CDS 3733327 3733518 . + 0 ID=cds-WP_001286419.1;Parent=gene-CCO40_RS17985;Dbxref=GenBank:WP_001286419.1;Name=WP_001286419.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459143.1;locus_tag=CCO40_RS17985;product=DNA gyrase inhibitor YacG;protein_id=WP_001286419.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3733515 3733625 . - . ID=gene-CCO40_RS17990;Name=CCO40_RS17990;end_range=3733625,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS17990;old_locus_tag=CCO40_17990;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 3733515 3733625 . - 0 ID=cds-CCO40_RS17990;Parent=gene-CCO40_RS17990;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3733625,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697068.1;locus_tag=CCO40_RS17990;partial=true;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3733654 3733806 . + . ID=gene-CCO40_RS22645;Name=CCO40_RS22645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22645;partial=true;pseudo=true;start_range=.,3733654 NZ_CP075116.1 Protein Homology CDS 3733654 3733806 . + 0 ID=cds-CCO40_RS22645;Parent=gene-CCO40_RS22645;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200034.1;locus_tag=CCO40_RS22645;partial=true;product=aldo/keto reductase;pseudo=true;start_range=.,3733654;transl_table=11 NZ_CP075116.1 RefSeq gene 3733840 3734235 . - . ID=gene-CCO40_RS17995;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=CCO40_RS17995;old_locus_tag=CCO40_17995 NZ_CP075116.1 Protein Homology CDS 3733840 3734235 . - 0 ID=cds-WP_000736056.1;Parent=gene-CCO40_RS17995;Dbxref=GenBank:WP_000736056.1;Name=WP_000736056.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459142.1;locus_tag=CCO40_RS17995;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_000736056.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3734387 3737092 . - . ID=gene-CCO40_RS18000;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=CCO40_RS18000;old_locus_tag=CCO40_18000 NZ_CP075116.1 Protein Homology CDS 3734387 3737092 . - 0 ID=cds-WP_000905756.1;Parent=gene-CCO40_RS18000;Dbxref=GenBank:WP_000905756.1;Name=WP_000905756.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=CCO40_RS18000;product=preprotein translocase subunit SecA;protein_id=WP_000905756.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3737154 3737651 . - . ID=gene-CCO40_RS18005;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=CCO40_RS18005;old_locus_tag=CCO40_18005 NZ_CP075116.1 Protein Homology CDS 3737154 3737651 . - 0 ID=cds-WP_000014333.1;Parent=gene-CCO40_RS18005;Dbxref=GenBank:WP_000014333.1;Name=WP_000014333.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308128.2;locus_tag=CCO40_RS18005;product=secA translation cis-regulator SecM;protein_id=WP_000014333.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3737930 3738847 . - . ID=gene-CCO40_RS18010;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=CCO40_RS18010;old_locus_tag=CCO40_18010 NZ_CP075116.1 Protein Homology CDS 3737930 3738847 . - 0 ID=cds-WP_000595487.1;Parent=gene-CCO40_RS18010;Dbxref=GenBank:WP_000595487.1;Name=WP_000595487.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=CCO40_RS18010;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595487.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3738948 3740099 . - . ID=gene-CCO40_RS18015;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=CCO40_RS18015;old_locus_tag=CCO40_18015 NZ_CP075116.1 Protein Homology CDS 3738948 3740099 . - 0 ID=cds-WP_000462786.1;Parent=gene-CCO40_RS18015;Dbxref=GenBank:WP_000462786.1;Name=WP_000462786.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=CCO40_RS18015;product=cell division protein FtsZ;protein_id=WP_000462786.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3740160 3741422 . - . ID=gene-CCO40_RS18020;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=CCO40_RS18020;old_locus_tag=CCO40_18020 NZ_CP075116.1 Protein Homology CDS 3740160 3741422 . - 0 ID=cds-WP_000588463.1;Parent=gene-CCO40_RS18020;Dbxref=GenBank:WP_000588463.1;Name=WP_000588463.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=CCO40_RS18020;product=cell division protein FtsA;protein_id=WP_000588463.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3741419 3742249 . - . ID=gene-CCO40_RS18025;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=CCO40_RS18025;old_locus_tag=CCO40_18025 NZ_CP075116.1 Protein Homology CDS 3741419 3742249 . - 0 ID=cds-WP_000075728.1;Parent=gene-CCO40_RS18025;Dbxref=GenBank:WP_000075728.1;Name=WP_000075728.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459136.1;locus_tag=CCO40_RS18025;product=cell division protein FtsQ;protein_id=WP_000075728.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3742251 3743171 . - . ID=gene-CCO40_RS18030;Name=CCO40_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18030;old_locus_tag=CCO40_18030 NZ_CP075116.1 Protein Homology CDS 3742251 3743171 . - 0 ID=cds-WP_000763895.1;Parent=gene-CCO40_RS18030;Dbxref=GenBank:WP_000763895.1;Name=WP_000763895.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459135.1;locus_tag=CCO40_RS18030;product=D-alanine--D-alanine ligase;protein_id=WP_000763895.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3743164 3744639 . - . ID=gene-CCO40_RS18035;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=CCO40_RS18035;old_locus_tag=CCO40_18035 NZ_CP075116.1 Protein Homology CDS 3743164 3744639 . - 0 ID=cds-WP_001096070.1;Parent=gene-CCO40_RS18035;Dbxref=GenBank:WP_001096070.1;Name=WP_001096070.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=CCO40_RS18035;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001096070.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3744758 3745825 . - . ID=gene-CCO40_RS18040;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=CCO40_RS18040;old_locus_tag=CCO40_18040 NZ_CP075116.1 Protein Homology CDS 3744758 3745825 . - 0 ID=cds-WP_000016613.1;Parent=gene-CCO40_RS18040;Dbxref=GenBank:WP_000016613.1;Name=WP_000016613.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=CCO40_RS18040;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_000016613.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3745822 3747066 . - . ID=gene-CCO40_RS18045;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=CCO40_RS18045;old_locus_tag=CCO40_18045 NZ_CP075116.1 Protein Homology CDS 3745822 3747066 . - 0 ID=cds-WP_001239803.1;Parent=gene-CCO40_RS18045;Dbxref=GenBank:WP_001239803.1;Name=WP_001239803.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459132.1;locus_tag=CCO40_RS18045;product=cell division protein FtsW;protein_id=WP_001239803.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3747066 3748382 . - . ID=gene-CCO40_RS18050;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=CCO40_RS18050;old_locus_tag=CCO40_18050 NZ_CP075116.1 Protein Homology CDS 3747066 3748382 . - 0 ID=cds-WP_000796445.1;Parent=gene-CCO40_RS18050;Dbxref=GenBank:WP_000796445.1;Name=WP_000796445.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=CCO40_RS18050;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_000796445.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3748385 3749467 . - . ID=gene-CCO40_RS18055;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=CCO40_RS18055;old_locus_tag=CCO40_18055 NZ_CP075116.1 Protein Homology CDS 3748385 3749467 . - 0 ID=cds-WP_000964138.1;Parent=gene-CCO40_RS18055;Dbxref=GenBank:WP_000964138.1;Name=WP_000964138.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=CCO40_RS18055;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964138.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3749461 3750819 . - . ID=gene-CCO40_RS18060;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=CCO40_RS18060;old_locus_tag=CCO40_18060 NZ_CP075116.1 Protein Homology CDS 3749461 3750819 . - 0 ID=cds-WP_000626632.1;Parent=gene-CCO40_RS18060;Dbxref=GenBank:WP_000626632.1;Name=WP_000626632.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459129.1;locus_tag=CCO40_RS18060;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_000626632.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3750816 3752303 . - . ID=gene-CCO40_RS18065;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=CCO40_RS18065;old_locus_tag=CCO40_18065 NZ_CP075116.1 Protein Homology CDS 3750816 3752303 . - 0 ID=cds-WP_000775072.1;Parent=gene-CCO40_RS18065;Dbxref=GenBank:WP_000775072.1;Name=WP_000775072.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459128.1;locus_tag=CCO40_RS18065;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_000775072.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3752290 3754056 . - . ID=gene-CCO40_RS18070;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=CCO40_RS18070;old_locus_tag=CCO40_18070 NZ_CP075116.1 Protein Homology CDS 3752290 3754056 . - 0 ID=cds-WP_000642235.1;Parent=gene-CCO40_RS18070;Dbxref=GenBank:WP_000642235.1;Name=WP_000642235.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=CCO40_RS18070;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642235.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3754072 3754437 . - . ID=gene-CCO40_RS18075;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=CCO40_RS18075;old_locus_tag=CCO40_18075 NZ_CP075116.1 Protein Homology CDS 3754072 3754437 . - 0 ID=cds-WP_000625651.1;Parent=gene-CCO40_RS18075;Dbxref=GenBank:WP_000625651.1;Name=WP_000625651.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=CCO40_RS18075;product=cell division protein FtsL;protein_id=WP_000625651.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3754434 3755375 . - . ID=gene-CCO40_RS18080;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=CCO40_RS18080;old_locus_tag=CCO40_18080 NZ_CP075116.1 Protein Homology CDS 3754434 3755375 . - 0 ID=cds-WP_000970444.1;Parent=gene-CCO40_RS18080;Dbxref=GenBank:WP_000970444.1;Name=WP_000970444.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=CCO40_RS18080;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970444.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3755377 3755835 . - . ID=gene-CCO40_RS18085;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=CCO40_RS18085;old_locus_tag=CCO40_18085 NZ_CP075116.1 Protein Homology CDS 3755377 3755835 . - 0 ID=cds-WP_000488294.1;Parent=gene-CCO40_RS18085;Dbxref=GenBank:WP_000488294.1;Name=WP_000488294.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167064.1;locus_tag=CCO40_RS18085;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_000488294.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3756441 3757445 . - . ID=gene-CCO40_RS18090;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=CCO40_RS18090;old_locus_tag=CCO40_18090 NZ_CP075116.1 Protein Homology CDS 3756441 3757445 . - 0 ID=cds-WP_000762406.1;Parent=gene-CCO40_RS18090;Dbxref=GenBank:WP_000762406.1;Name=WP_000762406.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459123.1;locus_tag=CCO40_RS18090;product=catabolite repressor/activator;protein_id=WP_000762406.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3757729 3758220 . - . ID=gene-CCO40_RS18095;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=CCO40_RS18095;old_locus_tag=CCO40_18095 NZ_CP075116.1 Protein Homology CDS 3757729 3758220 . - 0 ID=cds-WP_001563086.1;Parent=gene-CCO40_RS18095;Dbxref=GenBank:WP_001563086.1;Name=WP_001563086.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=CCO40_RS18095;product=acetolactate synthase small subunit;protein_id=WP_001563086.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3758223 3759947 . - . ID=gene-CCO40_RS18100;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=CCO40_RS18100;old_locus_tag=CCO40_18100 NZ_CP075116.1 Protein Homology CDS 3758223 3759947 . - 0 ID=cds-WP_000425604.1;Parent=gene-CCO40_RS18100;Dbxref=GenBank:WP_000425604.1;Name=WP_000425604.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=CCO40_RS18100;product=acetolactate synthase 3 large subunit;protein_id=WP_000425604.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3760269 3761213 . - . ID=gene-CCO40_RS18105;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=CCO40_RS18105;old_locus_tag=CCO40_18105 NZ_CP075116.1 Protein Homology CDS 3760269 3761213 . - 0 ID=cds-WP_001115420.1;Parent=gene-CCO40_RS18105;Dbxref=GenBank:WP_001115420.1;Name=WP_001115420.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459120.1;locus_tag=CCO40_RS18105;product=transcriptional regulator LeuO;protein_id=WP_001115420.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3761870 3761956 . + . ID=gene-CCO40_RS18110;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=CCO40_RS18110;old_locus_tag=CCO40_18110 NZ_CP075116.1 Protein Homology CDS 3761870 3761956 . + 0 ID=cds-WP_001575587.1;Parent=gene-CCO40_RS18110;Dbxref=GenBank:WP_001575587.1;Name=WP_001575587.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459119.1;locus_tag=CCO40_RS18110;product=leu operon leader peptide;protein_id=WP_001575587.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3762044 3763615 . + . ID=gene-CCO40_RS18115;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=CCO40_RS18115;old_locus_tag=CCO40_18115 NZ_CP075116.1 Protein Homology CDS 3762044 3763615 . + 0 ID=cds-WP_000082819.1;Parent=gene-CCO40_RS18115;Dbxref=GenBank:WP_000082819.1;Name=WP_000082819.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=CCO40_RS18115;product=2-isopropylmalate synthase;protein_id=WP_000082819.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3763615 3764706 . + . ID=gene-CCO40_RS18120;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=CCO40_RS18120;old_locus_tag=CCO40_18120 NZ_CP075116.1 Protein Homology CDS 3763615 3764706 . + 0 ID=cds-WP_000042325.1;Parent=gene-CCO40_RS18120;Dbxref=GenBank:WP_000042325.1;Name=WP_000042325.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=CCO40_RS18120;product=3-isopropylmalate dehydrogenase;protein_id=WP_000042325.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3764709 3766109 . + . ID=gene-CCO40_RS18125;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=CCO40_RS18125;old_locus_tag=CCO40_18125 NZ_CP075116.1 Protein Homology CDS 3764709 3766109 . + 0 ID=cds-WP_001140629.1;Parent=gene-CCO40_RS18125;Dbxref=GenBank:WP_001140629.1;Name=WP_001140629.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459116.1;locus_tag=CCO40_RS18125;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001140629.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3766120 3766725 . + . ID=gene-CCO40_RS18130;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=CCO40_RS18130;old_locus_tag=CCO40_18130 NZ_CP075116.1 Protein Homology CDS 3766120 3766725 . + 0 ID=cds-WP_000818267.1;Parent=gene-CCO40_RS18130;Dbxref=GenBank:WP_000818267.1;Name=WP_000818267.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=CCO40_RS18130;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000818267.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3767061 3767183 . - . ID=gene-CCO40_RS18135;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=CCO40_RS18135;old_locus_tag=CCO40_18135 NZ_CP075116.1 Protein Homology CDS 3767061 3767183 . - 0 ID=cds-WP_001248755.1;Parent=gene-CCO40_RS18135;Dbxref=GenBank:WP_001248755.1;Name=WP_001248755.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import across plasma membrane|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=CCO40_RS18135;product=glucose uptake inhibitor SgrT;protein_id=WP_001248755.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3767276 3768934 . + . ID=gene-CCO40_RS18140;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=CCO40_RS18140;old_locus_tag=CCO40_18140 NZ_CP075116.1 Protein Homology CDS 3767276 3768934 . + 0 ID=cds-WP_001139040.1;Parent=gene-CCO40_RS18140;Dbxref=GenBank:WP_001139040.1;Name=WP_001139040.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459114.1;locus_tag=CCO40_RS18140;product=HTH-type transcriptional regulator SgrR;protein_id=WP_001139040.1;transl_table=11 NZ_CP075116.1 cmsearch riboswitch 3768981 3769080 . + . ID=id-NZ_CP075116.1:3768981..3769080;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00059,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CP075116.1 RefSeq gene 3769112 3770095 . + . ID=gene-CCO40_RS18145;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=CCO40_RS18145;old_locus_tag=CCO40_18145 NZ_CP075116.1 Protein Homology CDS 3769112 3770095 . + 0 ID=cds-WP_000915326.1;Parent=gene-CCO40_RS18145;Dbxref=GenBank:WP_000915326.1;Name=WP_000915326.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459113.1;locus_tag=CCO40_RS18145;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_000915326.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3770071 3771681 . + . ID=gene-CCO40_RS18150;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=CCO40_RS18150;old_locus_tag=CCO40_18150 NZ_CP075116.1 Protein Homology CDS 3770071 3771681 . + 0 ID=cds-WP_000235642.1;Parent=gene-CCO40_RS18150;Dbxref=GenBank:WP_000235642.1;Name=WP_000235642.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459112.1;locus_tag=CCO40_RS18150;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_000235642.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3771665 3772372 . + . ID=gene-CCO40_RS18155;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=CCO40_RS18155;old_locus_tag=CCO40_18155 NZ_CP075116.1 Protein Homology CDS 3771665 3772372 . + 0 ID=cds-WP_000915973.1;Parent=gene-CCO40_RS18155;Dbxref=GenBank:WP_000915973.1;Name=WP_000915973.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459111.1;locus_tag=CCO40_RS18155;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_000915973.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3772411 3773178 . - . ID=gene-CCO40_RS18160;Name=CCO40_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18160;old_locus_tag=CCO40_18160 NZ_CP075116.1 Protein Homology CDS 3772411 3773178 . - 0 ID=cds-WP_001148369.1;Parent=gene-CCO40_RS18160;Dbxref=GenBank:WP_001148369.1;Name=WP_001148369.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459110.1;locus_tag=CCO40_RS18160;product=DedA family protein;protein_id=WP_001148369.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3773297 3774142 . - . ID=gene-CCO40_RS18165;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=CCO40_RS18165;old_locus_tag=CCO40_18165 NZ_CP075116.1 Protein Homology CDS 3773297 3774142 . - 0 ID=cds-WP_000852387.1;Parent=gene-CCO40_RS18165;Dbxref=GenBank:WP_000852387.1;Name=WP_000852387.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459109.1;locus_tag=CCO40_RS18165;product=arabinose operon transcriptional regulator AraC;protein_id=WP_000852387.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3774483 3776192 . + . ID=gene-CCO40_RS18170;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=CCO40_RS18170;old_locus_tag=CCO40_18170 NZ_CP075116.1 Protein Homology CDS 3774483 3776192 . + 0 ID=cds-WP_020437951.1;Parent=gene-CCO40_RS18170;Dbxref=GenBank:WP_020437951.1;Name=WP_020437951.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459108.1;locus_tag=CCO40_RS18170;product=ribulokinase;protein_id=WP_020437951.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3776203 3777705 . + . ID=gene-CCO40_RS18175;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=CCO40_RS18175;old_locus_tag=CCO40_18175 NZ_CP075116.1 Protein Homology CDS 3776203 3777705 . + 0 ID=cds-WP_000151693.1;Parent=gene-CCO40_RS18175;Dbxref=GenBank:WP_000151693.1;Name=WP_000151693.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=CCO40_RS18175;product=L-arabinose isomerase;protein_id=WP_000151693.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3777846 3778541 . + . ID=gene-CCO40_RS18180;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=CCO40_RS18180;old_locus_tag=CCO40_18180 NZ_CP075116.1 Protein Homology CDS 3777846 3778541 . + 0 ID=cds-WP_000888685.1;Parent=gene-CCO40_RS18180;Dbxref=GenBank:WP_000888685.1;Name=WP_000888685.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459106.1;locus_tag=CCO40_RS18180;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888685.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3778547 3778966 . - . ID=gene-CCO40_RS18185;Name=CCO40_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18185;old_locus_tag=CCO40_18185 NZ_CP075116.1 Protein Homology CDS 3778547 3778966 . - 0 ID=cds-WP_001103147.1;Parent=gene-CCO40_RS18185;Dbxref=GenBank:WP_001103147.1;Name=WP_001103147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=CCO40_RS18185;product=DUF4751 family protein;protein_id=WP_001103147.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3779484 3780104 . + . ID=gene-CCO40_RS18190;Name=CCO40_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18190;old_locus_tag=CCO40_18190 NZ_CP075116.1 Protein Homology CDS 3779484 3780104 . + 0 ID=cds-WP_000877512.1;Parent=gene-CCO40_RS18190;Dbxref=GenBank:WP_000877512.1;Name=WP_000877512.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=CCO40_RS18190;product=YdcF family protein;protein_id=WP_000877512.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3780148 3782499 . + . ID=gene-CCO40_RS18195;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=CCO40_RS18195;old_locus_tag=CCO40_18195 NZ_CP075116.1 Protein Homology CDS 3780148 3782499 . + 0 ID=cds-WP_000035723.1;Parent=gene-CCO40_RS18195;Dbxref=GenBank:WP_000035723.1;Name=WP_000035723.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=CCO40_RS18195;product=DNA polymerase II;protein_id=WP_000035723.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3782673 3785579 . + . ID=gene-CCO40_RS18200;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=CCO40_RS18200;old_locus_tag=CCO40_18200 NZ_CP075116.1 Protein Homology CDS 3782673 3785579 . + 0 ID=cds-WP_001116966.1;Parent=gene-CCO40_RS18200;Dbxref=GenBank:WP_001116966.1;Name=WP_001116966.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=CCO40_RS18200;product=RNA polymerase-associated protein RapA;protein_id=WP_001116966.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3785591 3786250 . + . ID=gene-CCO40_RS18205;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=CCO40_RS18205;old_locus_tag=CCO40_18205 NZ_CP075116.1 Protein Homology CDS 3785591 3786250 . + 0 ID=cds-WP_000525196.1;Parent=gene-CCO40_RS18205;Dbxref=GenBank:WP_000525196.1;Name=WP_000525196.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459100.1;locus_tag=CCO40_RS18205;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525196.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3786345 3787157 . - . ID=gene-CCO40_RS18210;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=CCO40_RS18210;old_locus_tag=CCO40_18210 NZ_CP075116.1 Protein Homology CDS 3786345 3787157 . - 0 ID=cds-WP_001200595.1;Parent=gene-CCO40_RS18210;Dbxref=GenBank:WP_001200595.1;Name=WP_001200595.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459099.1;locus_tag=CCO40_RS18210;product=co-chaperone DjlA;protein_id=WP_001200595.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3787411 3789771 . + . ID=gene-CCO40_RS18215;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=CCO40_RS18215;old_locus_tag=CCO40_18215 NZ_CP075116.1 Protein Homology CDS 3787411 3789771 . + 0 ID=cds-WP_000746127.1;Parent=gene-CCO40_RS18215;Dbxref=GenBank:WP_000746127.1;Name=WP_000746127.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=CCO40_RS18215;product=LPS assembly protein LptD;protein_id=WP_000746127.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3789825 3791111 . + . ID=gene-CCO40_RS18220;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=CCO40_RS18220;old_locus_tag=CCO40_18220 NZ_CP075116.1 Protein Homology CDS 3789825 3791111 . + 0 ID=cds-WP_000800482.1;Parent=gene-CCO40_RS18220;Dbxref=GenBank:WP_000800482.1;Name=WP_000800482.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0003755,GO:0042277,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459097.1;locus_tag=CCO40_RS18220;product=peptidylprolyl isomerase SurA;protein_id=WP_000800482.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3791111 3792100 . + . ID=gene-CCO40_RS18225;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=CCO40_RS18225;old_locus_tag=CCO40_18225 NZ_CP075116.1 Protein Homology CDS 3791111 3792100 . + 0 ID=cds-WP_094889029.1;Parent=gene-CCO40_RS18225;Dbxref=GenBank:WP_094889029.1;Name=WP_094889029.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459096.1;locus_tag=CCO40_RS18225;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_094889029.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3792097 3792918 . + . ID=gene-CCO40_RS18230;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=CCO40_RS18230;old_locus_tag=CCO40_18230 NZ_CP075116.1 Protein Homology CDS 3792097 3792918 . + 0 ID=cds-WP_001065397.1;Parent=gene-CCO40_RS18230;Dbxref=GenBank:WP_001065397.1;Name=WP_001065397.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459095.1;locus_tag=CCO40_RS18230;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065397.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3792921 3793298 . + . ID=gene-CCO40_RS18235;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;gene_synonym=corD;locus_tag=CCO40_RS18235;old_locus_tag=CCO40_18235 NZ_CP075116.1 Protein Homology CDS 3792921 3793298 . + 0 ID=cds-WP_000610894.1;Parent=gene-CCO40_RS18235;Dbxref=GenBank:WP_000610894.1;Name=WP_000610894.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=CCO40_RS18235;product=Co2+/Mg2+ efflux facilitator ApaG/CorD;protein_id=WP_000610894.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3793309 3794157 . + . ID=gene-CCO40_RS18240;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=CCO40_RS18240;old_locus_tag=CCO40_18240 NZ_CP075116.1 Protein Homology CDS 3793309 3794157 . + 0 ID=cds-WP_000257211.1;Parent=gene-CCO40_RS18240;Dbxref=GenBank:WP_000257211.1;Name=WP_000257211.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459093.1;locus_tag=CCO40_RS18240;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_000257211.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3794263 3794742 . - . ID=gene-CCO40_RS18245;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=CCO40_RS18245;old_locus_tag=CCO40_18245 NZ_CP075116.1 Protein Homology CDS 3794263 3794742 . - 0 ID=cds-WP_000624379.1;Parent=gene-CCO40_RS18245;Dbxref=GenBank:WP_000624379.1;Name=WP_000624379.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=CCO40_RS18245;product=type 3 dihydrofolate reductase;protein_id=WP_000624379.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3794940 3796802 . - . ID=gene-CCO40_RS18250;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=CCO40_RS18250;old_locus_tag=CCO40_18250 NZ_CP075116.1 Protein Homology CDS 3794940 3796802 . - 0 ID=cds-WP_000377168.1;Parent=gene-CCO40_RS18250;Dbxref=GenBank:WP_000377168.1;Name=WP_000377168.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=CCO40_RS18250;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_000377168.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3796795 3797325 . - . ID=gene-CCO40_RS18255;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=CCO40_RS18255;old_locus_tag=CCO40_18255 NZ_CP075116.1 Protein Homology CDS 3796795 3797325 . - 0 ID=cds-WP_000600706.1;Parent=gene-CCO40_RS18255;Dbxref=GenBank:WP_000600706.1;Name=WP_000600706.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=CCO40_RS18255;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_000600706.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3797447 3797527 . + . ID=gene-CCO40_RS22725;Name=CCO40_RS22725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22725;partial=true;pseudo=true;start_range=.,3797447 NZ_CP075116.1 Protein Homology CDS 3797447 3797527 . + 0 ID=cds-CCO40_RS22725;Parent=gene-CCO40_RS22725;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=CCO40_RS22725;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3797447;transl_table=11 NZ_CP075116.1 RefSeq gene 3797879 3799768 . - . ID=gene-CCO40_RS18260;Name=CCO40_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18260;old_locus_tag=CCO40_18260 NZ_CP075116.1 Protein Homology CDS 3797879 3799768 . - 0 ID=cds-WP_000066317.1;Parent=gene-CCO40_RS18260;Dbxref=GenBank:WP_000066317.1;Name=WP_000066317.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459089.1;locus_tag=CCO40_RS18260;product=sulfatase family protein;protein_id=WP_000066317.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3800666 3800956 . + . ID=gene-CCO40_RS18265;Name=srfN;gbkey=Gene;gene=srfN;gene_biotype=protein_coding;locus_tag=CCO40_RS18265;old_locus_tag=CCO40_18265 NZ_CP075116.1 Protein Homology CDS 3800666 3800956 . + 0 ID=cds-WP_000745961.1;Parent=gene-CCO40_RS18265;Dbxref=GenBank:WP_000745961.1;Name=WP_000745961.1;gbkey=CDS;gene=srfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459087.1;locus_tag=CCO40_RS18265;product=DUF1471 family virulence protein SrfN;protein_id=WP_000745961.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3801180 3801596 . - . ID=gene-CCO40_RS18270;Name=CCO40_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18270;old_locus_tag=CCO40_18270 NZ_CP075116.1 Protein Homology CDS 3801180 3801596 . - 0 ID=cds-WP_000767274.1;Parent=gene-CCO40_RS18270;Dbxref=GenBank:WP_000767274.1;Name=WP_000767274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459086.1;locus_tag=CCO40_RS18270;product=hypothetical protein;protein_id=WP_000767274.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3801876 3802106 . - . ID=gene-CCO40_RS18275;Name=CCO40_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18275;old_locus_tag=CCO40_18275 NZ_CP075116.1 Protein Homology CDS 3801876 3802106 . - 0 ID=cds-WP_001172089.1;Parent=gene-CCO40_RS18275;Dbxref=GenBank:WP_001172089.1;Name=WP_001172089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459085.1;locus_tag=CCO40_RS18275;product=YgdI/YgdR family lipoprotein;protein_id=WP_001172089.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3802195 3803535 . - . ID=gene-CCO40_RS18280;Name=CCO40_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18280;old_locus_tag=CCO40_18280 NZ_CP075116.1 Protein Homology CDS 3802195 3803535 . - 0 ID=cds-WP_001670709.1;Parent=gene-CCO40_RS18280;Dbxref=GenBank:WP_001670709.1;Name=WP_001670709.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459084.1;locus_tag=CCO40_RS18280;product=MFS transporter;protein_id=WP_001670709.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3803682 3803969 . - . ID=gene-CCO40_RS18285;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=CCO40_RS18285;old_locus_tag=CCO40_18285 NZ_CP075116.1 Protein Homology CDS 3803682 3803969 . - 0 ID=cds-WP_000203736.1;Parent=gene-CCO40_RS18285;Dbxref=GenBank:WP_000203736.1;Name=WP_000203736.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459083.1;locus_tag=CCO40_RS18285;product=ferredoxin-like protein FixX;protein_id=WP_000203736.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3803966 3805252 . - . ID=gene-CCO40_RS18290;Name=CCO40_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18290;old_locus_tag=CCO40_18290 NZ_CP075116.1 Protein Homology CDS 3803966 3805252 . - 0 ID=cds-WP_001287775.1;Parent=gene-CCO40_RS18290;Dbxref=GenBank:WP_001287775.1;Name=WP_001287775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459082.1;locus_tag=CCO40_RS18290;product=FAD-dependent oxidoreductase;protein_id=WP_001287775.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3805302 3806243 . - . ID=gene-CCO40_RS18295;Name=CCO40_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18295;old_locus_tag=CCO40_18295 NZ_CP075116.1 Protein Homology CDS 3805302 3806243 . - 0 ID=cds-WP_001032195.1;Parent=gene-CCO40_RS18295;Dbxref=GenBank:WP_001032195.1;Name=WP_001032195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459081.1;locus_tag=CCO40_RS18295;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001032195.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3806259 3807029 . - . ID=gene-CCO40_RS18300;Name=CCO40_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18300;old_locus_tag=CCO40_18300 NZ_CP075116.1 Protein Homology CDS 3806259 3807029 . - 0 ID=cds-WP_000692183.1;Parent=gene-CCO40_RS18300;Dbxref=GenBank:WP_000692183.1;Name=WP_000692183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459080.1;locus_tag=CCO40_RS18300;product=electron transfer flavoprotein FixA;protein_id=WP_000692183.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3807510 3809027 . + . ID=gene-CCO40_RS18305;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=CCO40_RS18305;old_locus_tag=CCO40_18305 NZ_CP075116.1 Protein Homology CDS 3807510 3809027 . + 0 ID=cds-WP_000787073.1;Parent=gene-CCO40_RS18305;Dbxref=GenBank:WP_000787073.1;Name=WP_000787073.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459079.1;locus_tag=CCO40_RS18305;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_000787073.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3809062 3810204 . + . ID=gene-CCO40_RS18310;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=CCO40_RS18310;old_locus_tag=CCO40_18310 NZ_CP075116.1 Protein Homology CDS 3809062 3810204 . + 0 ID=cds-WP_000347134.1;Parent=gene-CCO40_RS18310;Dbxref=GenBank:WP_000347134.1;Name=WP_000347134.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=CCO40_RS18310;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_000347134.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3810316 3811533 . + . ID=gene-CCO40_RS18315;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=CCO40_RS18315;old_locus_tag=CCO40_18315 NZ_CP075116.1 Protein Homology CDS 3810316 3811533 . + 0 ID=cds-WP_001016212.1;Parent=gene-CCO40_RS18315;Dbxref=GenBank:WP_001016212.1;Name=WP_001016212.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459077.1;locus_tag=CCO40_RS18315;product=L-carnitine CoA-transferase;protein_id=WP_001016212.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3811596 3813149 . + . ID=gene-CCO40_RS18320;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=CCO40_RS18320;old_locus_tag=CCO40_18320 NZ_CP075116.1 Protein Homology CDS 3811596 3813149 . + 0 ID=cds-WP_079898689.1;Parent=gene-CCO40_RS18320;Dbxref=GenBank:WP_079898689.1;Name=WP_079898689.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=CCO40_RS18320;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_079898689.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3813203 3813988 . + . ID=gene-CCO40_RS18325;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=CCO40_RS18325;old_locus_tag=CCO40_18325 NZ_CP075116.1 Protein Homology CDS 3813203 3813988 . + 0 ID=cds-WP_094889030.1;Parent=gene-CCO40_RS18325;Dbxref=GenBank:WP_094889030.1;Name=WP_094889030.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=CCO40_RS18325;product=crotonobetainyl-CoA hydratase;protein_id=WP_094889030.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3814098 3814694 . + . ID=gene-CCO40_RS18330;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=CCO40_RS18330;old_locus_tag=CCO40_18330 NZ_CP075116.1 Protein Homology CDS 3814098 3814694 . + 0 ID=cds-WP_000122863.1;Parent=gene-CCO40_RS18330;Dbxref=GenBank:WP_000122863.1;Name=WP_000122863.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459074.1;locus_tag=CCO40_RS18330;product=carnitine operon protein CaiE;protein_id=WP_000122863.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3814771 3815166 . - . ID=gene-CCO40_RS18335;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=CCO40_RS18335;old_locus_tag=CCO40_18335 NZ_CP075116.1 Protein Homology CDS 3814771 3815166 . - 0 ID=cds-WP_000333329.1;Parent=gene-CCO40_RS18335;Dbxref=GenBank:WP_000333329.1;Name=WP_000333329.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459073.1;locus_tag=CCO40_RS18335;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333329.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3815440 3818667 . - . ID=gene-CCO40_RS18340;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=CCO40_RS18340;old_locus_tag=CCO40_18340 NZ_CP075116.1 Protein Homology CDS 3815440 3818667 . - 0 ID=cds-WP_094889031.1;Parent=gene-CCO40_RS18340;Dbxref=GenBank:WP_094889031.1;Name=WP_094889031.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=CCO40_RS18340;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_094889031.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3818686 3819834 . - . ID=gene-CCO40_RS18345;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=CCO40_RS18345;old_locus_tag=CCO40_18345 NZ_CP075116.1 Protein Homology CDS 3818686 3819834 . - 0 ID=cds-WP_000597284.1;Parent=gene-CCO40_RS18345;Dbxref=GenBank:WP_000597284.1;Name=WP_000597284.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,L-glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=CCO40_RS18345;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_000597284.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3820698 3821519 . - . ID=gene-CCO40_RS18350;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=CCO40_RS18350;old_locus_tag=CCO40_18350 NZ_CP075116.1 Protein Homology CDS 3820698 3821519 . - 0 ID=cds-WP_000544030.1;Parent=gene-CCO40_RS18350;Dbxref=GenBank:WP_000544030.1;Name=WP_000544030.1;Ontology_term=GO:0009085,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase activity|0008839||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459069.1;locus_tag=CCO40_RS18350;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_000544030.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3821699 3822607 . - . ID=gene-CCO40_RS18355;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=CCO40_RS18355;old_locus_tag=CCO40_18355 NZ_CP075116.1 Protein Homology CDS 3821699 3822607 . - 0 ID=cds-WP_001103238.1;Parent=gene-CCO40_RS18355;Dbxref=GenBank:WP_001103238.1;Name=WP_001103238.1;Ontology_term=GO:0016310,GO:0019361,GO:0005524,GO:0046917;gbkey=CDS;gene=citG;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA,2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459068.1;locus_tag=CCO40_RS18355;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_001103238.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3822585 3823136 . - . ID=gene-CCO40_RS18360;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=CCO40_RS18360;old_locus_tag=CCO40_18360 NZ_CP075116.1 Protein Homology CDS 3822585 3823136 . - 0 ID=cds-WP_000679050.1;Parent=gene-CCO40_RS18360;Dbxref=GenBank:WP_000679050.1;Name=WP_000679050.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459067.1;locus_tag=CCO40_RS18360;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_000679050.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3823136 3824656 . - . ID=gene-CCO40_RS18365;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=CCO40_RS18365;old_locus_tag=CCO40_18365 NZ_CP075116.1 Protein Homology CDS 3823136 3824656 . - 0 ID=cds-WP_094889032.1;Parent=gene-CCO40_RS18365;Dbxref=GenBank:WP_094889032.1;Name=WP_094889032.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459066.1;locus_tag=CCO40_RS18365;product=citrate lyase subunit alpha;protein_id=WP_094889032.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3824667 3825536 . - . ID=gene-CCO40_RS18370;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=CCO40_RS18370;old_locus_tag=CCO40_18370 NZ_CP075116.1 Protein Homology CDS 3824667 3825536 . - 0 ID=cds-WP_001247801.1;Parent=gene-CCO40_RS18370;Dbxref=GenBank:WP_001247801.1;Name=WP_001247801.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459065.1;locus_tag=CCO40_RS18370;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_001247801.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3825533 3825826 . - . ID=gene-CCO40_RS18375;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=CCO40_RS18375;old_locus_tag=CCO40_18375 NZ_CP075116.1 Protein Homology CDS 3825533 3825826 . - 0 ID=cds-WP_000691461.1;Parent=gene-CCO40_RS18375;Dbxref=GenBank:WP_000691461.1;Name=WP_000691461.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459064.1;locus_tag=CCO40_RS18375;product=citrate lyase acyl carrier protein;protein_id=WP_000691461.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3825856 3826899 . - . ID=gene-CCO40_RS18380;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=CCO40_RS18380;old_locus_tag=CCO40_18380 NZ_CP075116.1 Protein Homology CDS 3825856 3826899 . - 0 ID=cds-WP_072103227.1;Parent=gene-CCO40_RS18380;Dbxref=GenBank:WP_072103227.1;Name=WP_072103227.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459063.1;locus_tag=CCO40_RS18380;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_072103227.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3827144 3828484 . + . ID=gene-CCO40_RS18385;Name=citS;gbkey=Gene;gene=citS;gene_biotype=protein_coding;locus_tag=CCO40_RS18385;old_locus_tag=CCO40_18385 NZ_CP075116.1 Protein Homology CDS 3827144 3828484 . + 0 ID=cds-WP_000183602.1;Parent=gene-CCO40_RS18385;Dbxref=GenBank:WP_000183602.1;Name=WP_000183602.1;Ontology_term=GO:0006101,GO:0006814,GO:0015293,GO:0022857;gbkey=CDS;gene=citS;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=citrate metabolic process|0006101||IEA,sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459062.1;locus_tag=CCO40_RS18385;product=citrate/sodium symporter CitS;protein_id=WP_000183602.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3828643 3828882 . + . ID=gene-CCO40_RS18390;Name=CCO40_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18390;old_locus_tag=CCO40_18390 NZ_CP075116.1 Protein Homology CDS 3828643 3828882 . + 0 ID=cds-WP_001001154.1;Parent=gene-CCO40_RS18390;Dbxref=GenBank:WP_001001154.1;Name=WP_001001154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459061.1;locus_tag=CCO40_RS18390;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_001001154.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3828899 3830674 . + . ID=gene-CCO40_RS18395;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=CCO40_RS18395;old_locus_tag=CCO40_18395 NZ_CP075116.1 Protein Homology CDS 3828899 3830674 . + 0 ID=cds-WP_000150439.1;Parent=gene-CCO40_RS18395;Dbxref=GenBank:WP_000150439.1;Name=WP_000150439.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=CCO40_RS18395;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_000150439.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3830687 3831988 . + . ID=gene-CCO40_RS18400;Name=CCO40_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18400;old_locus_tag=CCO40_18400 NZ_CP075116.1 Protein Homology CDS 3830687 3831988 . + 0 ID=cds-WP_000444821.1;Parent=gene-CCO40_RS18400;Dbxref=GenBank:WP_000444821.1;Name=WP_000444821.1;Ontology_term=GO:0006814,GO:0015451,GO:0016829;gbkey=CDS;go_function=decarboxylation-driven active transmembrane transporter activity|0015451||IEA,lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=CCO40_RS18400;product=oxalacetate decarboxylase subunit beta;protein_id=WP_000444821.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3832123 3833742 . + . ID=gene-CCO40_RS18405;Name=citA;gbkey=Gene;gene=citA;gene_biotype=protein_coding;locus_tag=CCO40_RS18405;old_locus_tag=CCO40_18405 NZ_CP075116.1 Protein Homology CDS 3832123 3833742 . + 0 ID=cds-WP_015406135.1;Parent=gene-CCO40_RS18405;Dbxref=GenBank:WP_015406135.1;Name=WP_015406135.1;gbkey=CDS;gene=citA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459058.1;locus_tag=CCO40_RS18405;product=citrate sensor histidine kinase CitA;protein_id=WP_015406135.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3833744 3834430 . + . ID=gene-CCO40_RS18410;Name=citB;gbkey=Gene;gene=citB;gene_biotype=protein_coding;locus_tag=CCO40_RS18410;old_locus_tag=CCO40_18410 NZ_CP075116.1 Protein Homology CDS 3833744 3834430 . + 0 ID=cds-WP_000377415.1;Parent=gene-CCO40_RS18410;Dbxref=GenBank:WP_000377415.1;Name=WP_000377415.1;gbkey=CDS;gene=citB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459057.1;locus_tag=CCO40_RS18410;product=citrate response regulator transcription factor CitB;protein_id=WP_000377415.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3834452 3835372 . - . ID=gene-CCO40_RS18415;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=CCO40_RS18415;old_locus_tag=CCO40_18415 NZ_CP075116.1 Protein Homology CDS 3834452 3835372 . - 0 ID=cds-WP_000127281.1;Parent=gene-CCO40_RS18415;Dbxref=GenBank:WP_000127281.1;Name=WP_000127281.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459056.1;locus_tag=CCO40_RS18415;product=ribonucleoside hydrolase RihC;protein_id=WP_000127281.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3835388 3836590 . - . ID=gene-CCO40_RS18420;Name=CCO40_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18420;old_locus_tag=CCO40_18420 NZ_CP075116.1 Protein Homology CDS 3835388 3836590 . - 0 ID=cds-WP_000516322.1;Parent=gene-CCO40_RS18420;Dbxref=GenBank:WP_000516322.1;Name=WP_000516322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459055.1;locus_tag=CCO40_RS18420;product=XAC2610-related protein;protein_id=WP_000516322.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3836790 3837740 . - . ID=gene-CCO40_RS18425;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=CCO40_RS18425;old_locus_tag=CCO40_18425 NZ_CP075116.1 Protein Homology CDS 3836790 3837740 . - 0 ID=cds-WP_001166428.1;Parent=gene-CCO40_RS18425;Dbxref=GenBank:WP_001166428.1;Name=WP_001166428.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=CCO40_RS18425;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166428.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3837743 3838192 . - . ID=gene-CCO40_RS18430;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=CCO40_RS18430;old_locus_tag=CCO40_18430 NZ_CP075116.1 Protein Homology CDS 3837743 3838192 . - 0 ID=cds-WP_000047269.1;Parent=gene-CCO40_RS18430;Dbxref=GenBank:WP_000047269.1;Name=WP_000047269.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459053.1;locus_tag=CCO40_RS18430;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000047269.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3838347 3838847 . - . ID=gene-CCO40_RS18435;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=CCO40_RS18435;old_locus_tag=CCO40_18435 NZ_CP075116.1 Protein Homology CDS 3838347 3838847 . - 0 ID=cds-WP_000042739.1;Parent=gene-CCO40_RS18435;Dbxref=GenBank:WP_000042739.1;Name=WP_000042739.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=CCO40_RS18435;product=signal peptidase II;protein_id=WP_000042739.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3838847 3841681 . - . ID=gene-CCO40_RS18440;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=CCO40_RS18440;old_locus_tag=CCO40_18440 NZ_CP075116.1 Protein Homology CDS 3838847 3841681 . - 0 ID=cds-WP_001674865.1;Parent=gene-CCO40_RS18440;Dbxref=GenBank:WP_001674865.1;Name=WP_001674865.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459051.1;locus_tag=CCO40_RS18440;product=isoleucine--tRNA ligase;protein_id=WP_001674865.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3841726 3842664 . - . ID=gene-CCO40_RS18445;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=CCO40_RS18445;old_locus_tag=CCO40_18445 NZ_CP075116.1 Protein Homology CDS 3841726 3842664 . - 0 ID=cds-WP_000767316.1;Parent=gene-CCO40_RS18445;Dbxref=GenBank:WP_000767316.1;Name=WP_000767316.1;Ontology_term=GO:0009231,GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459050.1;locus_tag=CCO40_RS18445;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767316.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3842672 3842887 . - . ID=gene-CCO40_RS18450;Name=CCO40_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18450;old_locus_tag=CCO40_18450 NZ_CP075116.1 Protein Homology CDS 3842672 3842887 . - 0 ID=cds-WP_001538903.1;Parent=gene-CCO40_RS18450;Dbxref=GenBank:WP_001538903.1;Name=WP_001538903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459049.1;locus_tag=CCO40_RS18450;product=DUF2575 family protein;protein_id=WP_001538903.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3842993 3843256 . + . ID=gene-CCO40_RS18455;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=CCO40_RS18455;old_locus_tag=CCO40_18455 NZ_CP075116.1 Protein Homology CDS 3842993 3843256 . + 0 ID=cds-WP_001518655.1;Parent=gene-CCO40_RS18455;Dbxref=GenBank:WP_001518655.1;Name=WP_001518655.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=CCO40_RS18455;product=30S ribosomal protein S20;protein_id=WP_001518655.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3843712 3845085 . + . ID=gene-CCO40_RS18460;Name=CCO40_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18460;old_locus_tag=CCO40_18460 NZ_CP075116.1 Protein Homology CDS 3843712 3845085 . + 0 ID=cds-WP_000099989.1;Parent=gene-CCO40_RS18460;Dbxref=GenBank:WP_000099989.1;Name=WP_000099989.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=CCO40_RS18460;product=MFS transporter;protein_id=WP_000099989.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3845125 3847164 . + . ID=gene-CCO40_RS18465;Name=CCO40_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18465;old_locus_tag=CCO40_18465 NZ_CP075116.1 Protein Homology CDS 3845125 3847164 . + 0 ID=cds-WP_094889033.1;Parent=gene-CCO40_RS18465;Dbxref=GenBank:WP_094889033.1;Name=WP_094889033.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459046.1;locus_tag=CCO40_RS18465;product=glycoside hydrolase family 31 protein;protein_id=WP_094889033.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3847219 3848118 . - . ID=gene-CCO40_RS18470;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=CCO40_RS18470;old_locus_tag=CCO40_18470 NZ_CP075116.1 Protein Homology CDS 3847219 3848118 . - 0 ID=cds-WP_000062872.1;Parent=gene-CCO40_RS18470;Dbxref=GenBank:WP_000062872.1;Name=WP_000062872.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459045.1;locus_tag=CCO40_RS18470;product=transcriptional activator NhaR;protein_id=WP_000062872.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3848180 3849346 . - . ID=gene-CCO40_RS18475;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=CCO40_RS18475;old_locus_tag=CCO40_18475 NZ_CP075116.1 Protein Homology CDS 3848180 3849346 . - 0 ID=cds-WP_000681340.1;Parent=gene-CCO40_RS18475;Dbxref=GenBank:WP_000681340.1;Name=WP_000681340.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459044.1;locus_tag=CCO40_RS18475;product=Na+/H+ antiporter NhaA;protein_id=WP_000681340.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3849509 3849736 . - . ID=gene-CCO40_RS18480;Name=CCO40_RS18480;end_range=3849736,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS18480;old_locus_tag=CCO40_18480;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 3849509 3849736 . - 0 ID=cds-CCO40_RS18480;Parent=gene-CCO40_RS18480;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3849736,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459043.1;locus_tag=CCO40_RS18480;partial=true;product=aryl-sulfate sulfotransferase;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 3849658 3849915 . - . ID=gene-CCO40_RS18485;Name=CCO40_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18485;old_locus_tag=CCO40_18485 NZ_CP075116.1 Protein Homology CDS 3849658 3849915 . - 0 ID=cds-WP_000528979.1;Parent=gene-CCO40_RS18485;Dbxref=GenBank:WP_000528979.1;Name=WP_000528979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528979.1;locus_tag=CCO40_RS18485;product=hypothetical protein;protein_id=WP_000528979.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3850034 3851287 . - . ID=gene-CCO40_RS18490;Name=CCO40_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18490;old_locus_tag=CCO40_18490 NZ_CP075116.1 Protein Homology CDS 3850034 3851287 . - 0 ID=cds-WP_000457885.1;Parent=gene-CCO40_RS18490;Dbxref=GenBank:WP_000457885.1;Name=WP_000457885.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457886.1;locus_tag=CCO40_RS18490;product=IS1/IS1595 family N-terminal zinc-binding domain-containing protein;protein_id=WP_000457885.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3851305 3852501 . - . ID=gene-CCO40_RS18495;Name=CCO40_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18495;old_locus_tag=CCO40_18495 NZ_CP075116.1 Protein Homology CDS 3851305 3852501 . - 0 ID=cds-WP_001189145.1;Parent=gene-CCO40_RS18495;Dbxref=GenBank:WP_001189145.1;Name=WP_001189145.1;Ontology_term=GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519625.1;locus_tag=CCO40_RS18495;product=anaerobic sulfatase maturase;protein_id=WP_001189145.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3852605 3854098 . - . ID=gene-CCO40_RS18500;Name=CCO40_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18500;old_locus_tag=CCO40_18500 NZ_CP075116.1 Protein Homology CDS 3852605 3854098 . - 0 ID=cds-WP_000754366.1;Parent=gene-CCO40_RS18500;Dbxref=GenBank:WP_000754366.1;Name=WP_000754366.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459040.1;locus_tag=CCO40_RS18500;product=sulfatase family protein;protein_id=WP_000754366.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3854119 3854883 . - . ID=gene-CCO40_RS18505;Name=CCO40_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18505;old_locus_tag=CCO40_18505 NZ_CP075116.1 Protein Homology CDS 3854119 3854883 . - 0 ID=cds-WP_094889034.1;Parent=gene-CCO40_RS18505;Dbxref=GenBank:WP_094889034.1;Name=WP_094889034.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052612.1;locus_tag=CCO40_RS18505;product=outer membrane protein OmpK;protein_id=WP_094889034.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3855324 3855721 . + . ID=gene-CCO40_RS18510;Name=CCO40_RS18510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS18510;old_locus_tag=CCO40_18510;partial=true;pseudo=true;start_range=.,3855324 NZ_CP075116.1 Protein Homology CDS 3855324 3855721 . + 0 ID=cds-CCO40_RS18510;Parent=gene-CCO40_RS18510;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009166,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459038.1;locus_tag=CCO40_RS18510;partial=true;product=5'-nucleotidase C-terminal domain-containing protein;pseudo=true;start_range=.,3855324;transl_table=11 NZ_CP075116.1 RefSeq gene 3855839 3856051 . - . ID=gene-CCO40_RS18515;Name=CCO40_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18515;old_locus_tag=CCO40_18515 NZ_CP075116.1 Protein Homology CDS 3855839 3856051 . - 0 ID=cds-WP_000289440.1;Parent=gene-CCO40_RS18515;Dbxref=GenBank:WP_000289440.1;Name=WP_000289440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000289440.1;locus_tag=CCO40_RS18515;product=hypothetical protein;protein_id=WP_000289440.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3856799 3857248 . + . ID=gene-CCO40_RS18520;Name=CCO40_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18520;old_locus_tag=CCO40_18520 NZ_CP075116.1 Protein Homology CDS 3856799 3857248 . + 0 ID=cds-WP_001248823.1;Parent=gene-CCO40_RS18520;Dbxref=GenBank:WP_001248823.1;Name=WP_001248823.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459034.1;locus_tag=CCO40_RS18520;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001248823.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3857348 3857635 . - . ID=gene-CCO40_RS18525;Name=CCO40_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18525;old_locus_tag=CCO40_18525 NZ_CP075116.1 Protein Homology CDS 3857348 3857635 . - 0 ID=cds-WP_000839833.1;Parent=gene-CCO40_RS18525;Dbxref=GenBank:WP_000839833.1;Name=WP_000839833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000839835.1;locus_tag=CCO40_RS18525;product=hypothetical protein;protein_id=WP_000839833.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3857674 3858519 . - . ID=gene-CCO40_RS18530;Name=CCO40_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18530;old_locus_tag=CCO40_18530 NZ_CP075116.1 Protein Homology CDS 3857674 3858519 . - 0 ID=cds-WP_000291382.1;Parent=gene-CCO40_RS18530;Dbxref=GenBank:WP_000291382.1;Name=WP_000291382.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459033.1;locus_tag=CCO40_RS18530;product=DsbA family protein;protein_id=WP_000291382.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3858584 3859315 . - . ID=gene-CCO40_RS18535;Name=bcfG;gbkey=Gene;gene=bcfG;gene_biotype=protein_coding;locus_tag=CCO40_RS18535;old_locus_tag=CCO40_18535 NZ_CP075116.1 Protein Homology CDS 3858584 3859315 . - 0 ID=cds-WP_001135027.1;Parent=gene-CCO40_RS18535;Dbxref=GenBank:WP_001135027.1;Name=WP_001135027.1;gbkey=CDS;gene=bcfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=CCO40_RS18535;product=fimbrial chaperone BcfG;protein_id=WP_001135027.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3859281 3859799 . - . ID=gene-CCO40_RS18540;Name=CCO40_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18540;old_locus_tag=CCO40_18540 NZ_CP075116.1 Protein Homology CDS 3859281 3859799 . - 0 ID=cds-WP_001243232.1;Parent=gene-CCO40_RS18540;Dbxref=GenBank:WP_001243232.1;Name=WP_001243232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459031.1;locus_tag=CCO40_RS18540;product=fimbrial protein BcfF;protein_id=WP_001243232.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3859815 3860360 . - . ID=gene-CCO40_RS18545;Name=CCO40_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18545;old_locus_tag=CCO40_18545 NZ_CP075116.1 Protein Homology CDS 3859815 3860360 . - 0 ID=cds-WP_001082038.1;Parent=gene-CCO40_RS18545;Dbxref=GenBank:WP_001082038.1;Name=WP_001082038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459030.1;locus_tag=CCO40_RS18545;product=fimbrial protein BcfE;protein_id=WP_001082038.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3860361 3861368 . - . ID=gene-CCO40_RS18550;Name=CCO40_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18550;old_locus_tag=CCO40_18550 NZ_CP075116.1 Protein Homology CDS 3860361 3861368 . - 0 ID=cds-WP_000701238.1;Parent=gene-CCO40_RS18550;Dbxref=GenBank:WP_000701238.1;Name=WP_000701238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459029.1;locus_tag=CCO40_RS18550;product=fimbrial protein BcfD;protein_id=WP_000701238.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3861369 3863990 . - . ID=gene-CCO40_RS18555;Name=bcfC;gbkey=Gene;gene=bcfC;gene_biotype=protein_coding;locus_tag=CCO40_RS18555;old_locus_tag=CCO40_18555 NZ_CP075116.1 Protein Homology CDS 3861369 3863990 . - 0 ID=cds-WP_001245864.1;Parent=gene-CCO40_RS18555;Dbxref=GenBank:WP_001245864.1;Name=WP_001245864.1;gbkey=CDS;gene=bcfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=CCO40_RS18555;product=fimbrial usher BcfC;protein_id=WP_001245864.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3863995 3864681 . - . ID=gene-CCO40_RS18560;Name=bcfB;gbkey=Gene;gene=bcfB;gene_biotype=protein_coding;locus_tag=CCO40_RS18560;old_locus_tag=CCO40_18560 NZ_CP075116.1 Protein Homology CDS 3863995 3864681 . - 0 ID=cds-WP_000739906.1;Parent=gene-CCO40_RS18560;Dbxref=GenBank:WP_000739906.1;Name=WP_000739906.1;gbkey=CDS;gene=bcfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459027.1;locus_tag=CCO40_RS18560;product=fimbrial biogenesis chaperone BcfB;protein_id=WP_000739906.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3864782 3865324 . - . ID=gene-CCO40_RS18565;Name=CCO40_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18565;old_locus_tag=CCO40_18565 NZ_CP075116.1 Protein Homology CDS 3864782 3865324 . - 0 ID=cds-WP_000743357.1;Parent=gene-CCO40_RS18565;Dbxref=GenBank:WP_000743357.1;Name=WP_000743357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459026.1;locus_tag=CCO40_RS18565;product=fimbrial protein BcfA;protein_id=WP_000743357.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3865754 3866458 . - . ID=gene-CCO40_RS18570;Name=CCO40_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18570;old_locus_tag=CCO40_18570 NZ_CP075116.1 Protein Homology CDS 3865754 3866458 . - 0 ID=cds-WP_000738617.1;Parent=gene-CCO40_RS18570;Dbxref=GenBank:WP_000738617.1;Name=WP_000738617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459025.1;locus_tag=CCO40_RS18570;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000738617.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3866739 3869735 . - . ID=gene-CCO40_RS18575;Name=CCO40_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18575;old_locus_tag=CCO40_18575 NZ_CP075116.1 Protein Homology CDS 3866739 3869735 . - 0 ID=cds-WP_000155785.1;Parent=gene-CCO40_RS18575;Dbxref=GenBank:WP_000155785.1;Name=WP_000155785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=CCO40_RS18575;product=hypothetical protein;protein_id=WP_000155785.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3869827 3871926 . - . ID=gene-CCO40_RS18580;Name=CCO40_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18580;old_locus_tag=CCO40_18580 NZ_CP075116.1 Protein Homology CDS 3869827 3871926 . - 0 ID=cds-WP_000235798.1;Parent=gene-CCO40_RS18580;Dbxref=GenBank:WP_000235798.1;Name=WP_000235798.1;Ontology_term=GO:0005975,GO:0004568,GO:0008061;gbkey=CDS;go_function=chitinase activity|0004568||IEA,chitin binding|0008061||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459023.1;locus_tag=CCO40_RS18580;product=glycoside hydrolase family 18 protein;protein_id=WP_000235798.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3872307 3872750 . + . ID=gene-CCO40_RS18585;Name=CCO40_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18585;old_locus_tag=CCO40_18585 NZ_CP075116.1 Protein Homology CDS 3872307 3872750 . + 0 ID=cds-WP_000860681.1;Parent=gene-CCO40_RS18585;Dbxref=GenBank:WP_000860681.1;Name=WP_000860681.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459022.1;locus_tag=CCO40_RS18585;product=winged helix-turn-helix domain-containing protein;protein_id=WP_000860681.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3872767 3873300 . + . ID=gene-CCO40_RS18590;Name=CCO40_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18590;old_locus_tag=CCO40_18590 NZ_CP075116.1 Protein Homology CDS 3872767 3873300 . + 0 ID=cds-WP_001068132.1;Parent=gene-CCO40_RS18590;Dbxref=GenBank:WP_001068132.1;Name=WP_001068132.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=CCO40_RS18590;product=glycoside hydrolase family 108 protein;protein_id=WP_001068132.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3873361 3873705 . - . ID=gene-CCO40_RS18595;Name=CCO40_RS18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18595;old_locus_tag=CCO40_18595 NZ_CP075116.1 Protein Homology CDS 3873361 3873705 . - 0 ID=cds-WP_000026889.1;Parent=gene-CCO40_RS18595;Dbxref=GenBank:WP_000026889.1;Name=WP_000026889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459020.1;locus_tag=CCO40_RS18595;product=phage holin family protein;protein_id=WP_000026889.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3873832 3874779 . - . ID=gene-CCO40_RS18600;Name=CCO40_RS18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18600;old_locus_tag=CCO40_18600 NZ_CP075116.1 Protein Homology CDS 3873832 3874779 . - 0 ID=cds-WP_000534907.1;Parent=gene-CCO40_RS18600;Dbxref=GenBank:WP_000534907.1;Name=WP_000534907.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459019.1;locus_tag=CCO40_RS18600;product=LysR family transcriptional regulator;protein_id=WP_000534907.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3875060 3876199 . - . ID=gene-CCO40_RS18605;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=CCO40_RS18605;old_locus_tag=CCO40_18605 NZ_CP075116.1 Protein Homology CDS 3875060 3876199 . - 0 ID=cds-WP_001119009.1;Parent=gene-CCO40_RS18605;Dbxref=GenBank:WP_001119009.1;Name=WP_001119009.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459018.1;locus_tag=CCO40_RS18605;product=molecular chaperone DnaJ;protein_id=WP_001119009.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3876285 3878201 . - . ID=gene-CCO40_RS18610;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=CCO40_RS18610;old_locus_tag=CCO40_18610 NZ_CP075116.1 Protein Homology CDS 3876285 3878201 . - 0 ID=cds-WP_000516126.1;Parent=gene-CCO40_RS18610;Dbxref=GenBank:WP_000516126.1;Name=WP_000516126.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=CCO40_RS18610;product=molecular chaperone DnaK;protein_id=WP_000516126.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3878550 3878954 . + . ID=gene-CCO40_RS18615;Name=CCO40_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18615;old_locus_tag=CCO40_18615 NZ_CP075116.1 Protein Homology CDS 3878550 3878954 . + 0 ID=cds-WP_094889035.1;Parent=gene-CCO40_RS18615;Dbxref=GenBank:WP_094889035.1;Name=WP_094889035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459016.1;locus_tag=CCO40_RS18615;product=DUF2541 family protein;protein_id=WP_094889035.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3878990 3879703 . + . ID=gene-CCO40_RS18620;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=CCO40_RS18620;old_locus_tag=CCO40_18620 NZ_CP075116.1 Protein Homology CDS 3878990 3879703 . + 0 ID=cds-WP_001103477.1;Parent=gene-CCO40_RS18620;Dbxref=GenBank:WP_001103477.1;Name=WP_001103477.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459015.1;locus_tag=CCO40_RS18620;product=acidic protein MsyB;protein_id=WP_001103477.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3879853 3880419 . + . ID=gene-CCO40_RS18625;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=CCO40_RS18625;old_locus_tag=CCO40_18625 NZ_CP075116.1 Protein Homology CDS 3879853 3880419 . + 0 ID=cds-WP_000528525.1;Parent=gene-CCO40_RS18625;Dbxref=GenBank:WP_000528525.1;Name=WP_000528525.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459014.1;locus_tag=CCO40_RS18625;product=acetate uptake transporter;protein_id=WP_000528525.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3880476 3881066 . - . ID=gene-CCO40_RS18630;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=CCO40_RS18630;old_locus_tag=CCO40_18630 NZ_CP075116.1 Protein Homology CDS 3880476 3881066 . - 0 ID=cds-WP_000380373.1;Parent=gene-CCO40_RS18630;Dbxref=GenBank:WP_000380373.1;Name=WP_000380373.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380375.1;locus_tag=CCO40_RS18630;product=molybdopterin adenylyltransferase;protein_id=WP_000380373.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3881177 3882130 . - . ID=gene-CCO40_RS18635;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=CCO40_RS18635;old_locus_tag=CCO40_18635 NZ_CP075116.1 Protein Homology CDS 3881177 3882130 . - 0 ID=cds-WP_000130175.1;Parent=gene-CCO40_RS18635;Dbxref=GenBank:WP_000130175.1;Name=WP_000130175.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459012.1;locus_tag=CCO40_RS18635;product=transaldolase;protein_id=WP_000130175.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3882399 3883829 . + . ID=gene-CCO40_RS18640;Name=CCO40_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18640;old_locus_tag=CCO40_18640 NZ_CP075116.1 Protein Homology CDS 3882399 3883829 . + 0 ID=cds-WP_023195069.1;Parent=gene-CCO40_RS18640;Dbxref=GenBank:WP_023195069.1;Name=WP_023195069.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459011.1;locus_tag=CCO40_RS18640;product=alanine/glycine:cation symporter family protein;protein_id=WP_023195069.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3883908 3884681 . + . ID=gene-CCO40_RS18645;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=CCO40_RS18645;old_locus_tag=CCO40_18645 NZ_CP075116.1 Protein Homology CDS 3883908 3884681 . + 0 ID=cds-WP_000906175.1;Parent=gene-CCO40_RS18645;Dbxref=GenBank:WP_000906175.1;Name=WP_000906175.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459010.1;locus_tag=CCO40_RS18645;product=peroxide stress protein YaaA;protein_id=WP_000906175.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3884775 3886061 . - . ID=gene-CCO40_RS18650;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=CCO40_RS18650;old_locus_tag=CCO40_18650 NZ_CP075116.1 Protein Homology CDS 3884775 3886061 . - 0 ID=cds-WP_000781110.1;Parent=gene-CCO40_RS18650;Dbxref=GenBank:WP_000781110.1;Name=WP_000781110.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=CCO40_RS18650;product=threonine synthase;protein_id=WP_000781110.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3886065 3886994 . - . ID=gene-CCO40_RS18655;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=CCO40_RS18655;old_locus_tag=CCO40_18655 NZ_CP075116.1 Protein Homology CDS 3886065 3886994 . - 0 ID=cds-WP_000241685.1;Parent=gene-CCO40_RS18655;Dbxref=GenBank:WP_000241685.1;Name=WP_000241685.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459008.1;locus_tag=CCO40_RS18655;product=homoserine kinase;protein_id=WP_000241685.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3886996 3889458 . - . ID=gene-CCO40_RS18660;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=CCO40_RS18660;old_locus_tag=CCO40_18660 NZ_CP075116.1 Protein Homology CDS 3886996 3889458 . - 0 ID=cds-WP_094889036.1;Parent=gene-CCO40_RS18660;Dbxref=GenBank:WP_094889036.1;Name=WP_094889036.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=CCO40_RS18660;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_094889036.1;transl_table=11 NZ_CP075116.1 cmsearch sequence_feature 3889484 3889604 . - . ID=id-NZ_CP075116.1:3889484..3889604;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00506,COORDINATES: profile:INFERNAL:1.1.5 NZ_CP075116.1 RefSeq gene 3889540 3889605 . - . ID=gene-CCO40_RS18665;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=CCO40_RS18665;old_locus_tag=CCO40_18665 NZ_CP075116.1 Protein Homology CDS 3889540 3889605 . - 0 ID=cds-WP_001575544.1;Parent=gene-CCO40_RS18665;Dbxref=GenBank:WP_001575544.1;Name=WP_001575544.1;gbkey=CDS;gene=thrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459006.1;locus_tag=CCO40_RS18665;product=thr operon leader peptide;protein_id=WP_001575544.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3889819 3890505 . - . ID=gene-CCO40_RS18670;Name=CCO40_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18670;old_locus_tag=CCO40_18670 NZ_CP075116.1 Protein Homology CDS 3889819 3890505 . - 0 ID=cds-WP_001266780.1;Parent=gene-CCO40_RS18670;Dbxref=GenBank:WP_001266780.1;Name=WP_001266780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463456.1;locus_tag=CCO40_RS18670;product=tRNA/rRNA methyltransferase;protein_id=WP_001266780.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3890905 3891045 . - . ID=gene-CCO40_RS18675;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=CCO40_RS18675;old_locus_tag=CCO40_18675 NZ_CP075116.1 Protein Homology CDS 3890905 3891045 . - 0 ID=cds-WP_001541509.1;Parent=gene-CCO40_RS18675;Dbxref=GenBank:WP_001541509.1;Name=WP_001541509.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=CCO40_RS18675;product=YjjY family protein;protein_id=WP_001541509.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3891141 3891857 . + . ID=gene-CCO40_RS18680;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=CCO40_RS18680;old_locus_tag=CCO40_18680 NZ_CP075116.1 Protein Homology CDS 3891141 3891857 . + 0 ID=cds-WP_001194359.1;Parent=gene-CCO40_RS18680;Dbxref=GenBank:WP_001194359.1;Name=WP_001194359.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=CCO40_RS18680;product=two-component system response regulator ArcA;protein_id=WP_001194359.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3892124 3892438 . + . ID=gene-CCO40_RS18685;Name=CCO40_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18685;old_locus_tag=CCO40_18685 NZ_CP075116.1 Protein Homology CDS 3892124 3892438 . + 0 ID=cds-WP_000749515.1;Parent=gene-CCO40_RS18685;Dbxref=GenBank:WP_000749515.1;Name=WP_000749515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=CCO40_RS18685;product=YmdA family protein;protein_id=WP_000749515.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3892823 3893494 . + . ID=gene-CCO40_RS18690;Name=CCO40_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18690;old_locus_tag=CCO40_18690 NZ_CP075116.1 Protein Homology CDS 3892823 3893494 . + 0 ID=cds-WP_000811635.1;Parent=gene-CCO40_RS18690;Dbxref=GenBank:WP_000811635.1;Name=WP_000811635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463452.1;locus_tag=CCO40_RS18690;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000811635.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3893833 3894378 . + . ID=gene-CCO40_RS18695;Name=CCO40_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18695;old_locus_tag=CCO40_18695 NZ_CP075116.1 Protein Homology CDS 3893833 3894378 . + 0 ID=cds-WP_000482235.1;Parent=gene-CCO40_RS18695;Dbxref=GenBank:WP_000482235.1;Name=WP_000482235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=CCO40_RS18695;product=fimbrial protein;protein_id=WP_000482235.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3894448 3895131 . + . ID=gene-CCO40_RS18700;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=CCO40_RS18700;old_locus_tag=CCO40_18700 NZ_CP075116.1 Protein Homology CDS 3894448 3895131 . + 0 ID=cds-WP_000680512.1;Parent=gene-CCO40_RS18700;Dbxref=GenBank:WP_000680512.1;Name=WP_000680512.1;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463450.1;locus_tag=CCO40_RS18700;product=fimbrial biogenesis chaperone SthA;protein_id=WP_000680512.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3895177 3897714 . + . ID=gene-CCO40_RS18705;Name=CCO40_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18705;old_locus_tag=CCO40_18705 NZ_CP075116.1 Protein Homology CDS 3895177 3897714 . + 0 ID=cds-WP_001160707.1;Parent=gene-CCO40_RS18705;Dbxref=GenBank:WP_001160707.1;Name=WP_001160707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=CCO40_RS18705;product=fimbrial outer membrane usher protein;protein_id=WP_001160707.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3897732 3898289 . + . ID=gene-CCO40_RS18710;Name=CCO40_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18710;old_locus_tag=CCO40_18710 NZ_CP075116.1 Protein Homology CDS 3897732 3898289 . + 0 ID=cds-WP_094889037.1;Parent=gene-CCO40_RS18710;Dbxref=GenBank:WP_094889037.1;Name=WP_094889037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463448.1;locus_tag=CCO40_RS18710;product=fimbrial protein;protein_id=WP_094889037.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3898330 3899415 . + . ID=gene-CCO40_RS18715;Name=sthE;gbkey=Gene;gene=sthE;gene_biotype=protein_coding;locus_tag=CCO40_RS18715;old_locus_tag=CCO40_18715 NZ_CP075116.1 Protein Homology CDS 3898330 3899415 . + 0 ID=cds-WP_023250198.1;Parent=gene-CCO40_RS18715;Dbxref=GenBank:WP_023250198.1;Name=WP_023250198.1;gbkey=CDS;gene=sthE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=CCO40_RS18715;product=fimbrial major subunit SthE;protein_id=WP_023250198.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3899473 3900822 . - . ID=gene-CCO40_RS18720;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=CCO40_RS18720;old_locus_tag=CCO40_18720 NZ_CP075116.1 Protein Homology CDS 3899473 3900822 . - 0 ID=cds-WP_000920384.1;Parent=gene-CCO40_RS18720;Dbxref=GenBank:WP_000920384.1;Name=WP_000920384.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463446.1;locus_tag=CCO40_RS18720;product=cell envelope integrity protein CreD;protein_id=WP_000920384.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3900880 3902304 . - . ID=gene-CCO40_RS18725;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=CCO40_RS18725;old_locus_tag=CCO40_18725 NZ_CP075116.1 Protein Homology CDS 3900880 3902304 . - 0 ID=cds-WP_020839627.1;Parent=gene-CCO40_RS18725;Dbxref=GenBank:WP_020839627.1;Name=WP_020839627.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463445.1;locus_tag=CCO40_RS18725;product=two-component system sensor histidine kinase CreC;protein_id=WP_020839627.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3902304 3902993 . - . ID=gene-CCO40_RS18730;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=CCO40_RS18730;old_locus_tag=CCO40_18730 NZ_CP075116.1 Protein Homology CDS 3902304 3902993 . - 0 ID=cds-WP_001187049.1;Parent=gene-CCO40_RS18730;Dbxref=GenBank:WP_001187049.1;Name=WP_001187049.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463444.1;locus_tag=CCO40_RS18730;product=two-component system response regulator CreB;protein_id=WP_001187049.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3903006 3903479 . - . ID=gene-CCO40_RS18735;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=CCO40_RS18735;old_locus_tag=CCO40_18735 NZ_CP075116.1 Protein Homology CDS 3903006 3903479 . - 0 ID=cds-WP_000875811.1;Parent=gene-CCO40_RS18735;Dbxref=GenBank:WP_000875811.1;Name=WP_000875811.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463443.1;locus_tag=CCO40_RS18735;product=protein CreA;protein_id=WP_000875811.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3903691 3904560 . + . ID=gene-CCO40_RS18740;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=CCO40_RS18740;old_locus_tag=CCO40_18740 NZ_CP075116.1 Protein Homology CDS 3903691 3904560 . + 0 ID=cds-WP_000371685.1;Parent=gene-CCO40_RS18740;Dbxref=GenBank:WP_000371685.1;Name=WP_000371685.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463442.1;locus_tag=CCO40_RS18740;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371685.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3904557 3905204 . - . ID=gene-CCO40_RS18745;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=CCO40_RS18745;old_locus_tag=CCO40_18745 NZ_CP075116.1 Protein Homology CDS 3904557 3905204 . - 0 ID=cds-WP_000942363.1;Parent=gene-CCO40_RS18745;Dbxref=GenBank:WP_000942363.1;Name=WP_000942363.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=CCO40_RS18745;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942363.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3905253 3905768 . + . ID=gene-CCO40_RS18750;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=CCO40_RS18750;old_locus_tag=CCO40_18750 NZ_CP075116.1 Protein Homology CDS 3905253 3905768 . + 0 ID=cds-WP_000554311.1;Parent=gene-CCO40_RS18750;Dbxref=GenBank:WP_000554311.1;Name=WP_000554311.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=CCO40_RS18750;product=inosine/xanthosine triphosphatase;protein_id=WP_000554311.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3905870 3906196 . - . ID=gene-CCO40_RS18755;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=CCO40_RS18755;old_locus_tag=CCO40_18755 NZ_CP075116.1 Protein Homology CDS 3905870 3906196 . - 0 ID=cds-WP_000192003.1;Parent=gene-CCO40_RS18755;Dbxref=GenBank:WP_000192003.1;Name=WP_000192003.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463439.1;locus_tag=CCO40_RS18755;product=trp operon repressor;protein_id=WP_000192003.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3906254 3908191 . - . ID=gene-CCO40_RS18760;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=CCO40_RS18760;old_locus_tag=CCO40_18760 NZ_CP075116.1 Protein Homology CDS 3906254 3908191 . - 0 ID=cds-WP_001584412.1;Parent=gene-CCO40_RS18760;Dbxref=GenBank:WP_001584412.1;Name=WP_001584412.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155637.1;locus_tag=CCO40_RS18760;product=murein transglycosylase;protein_id=WP_001584412.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3908400 3910067 . + . ID=gene-CCO40_RS18765;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=CCO40_RS18765;old_locus_tag=CCO40_18765 NZ_CP075116.1 Protein Homology CDS 3908400 3910067 . + 0 ID=cds-WP_000046770.1;Parent=gene-CCO40_RS18765;Dbxref=GenBank:WP_000046770.1;Name=WP_000046770.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=CCO40_RS18765;product=energy-dependent translational throttle protein EttA;protein_id=WP_000046770.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3910185 3911417 . - . ID=gene-CCO40_RS18770;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=CCO40_RS18770;old_locus_tag=CCO40_18770 NZ_CP075116.1 Protein Homology CDS 3910185 3911417 . - 0 ID=cds-WP_001519486.1;Parent=gene-CCO40_RS18770;Dbxref=GenBank:WP_001519486.1;Name=WP_001519486.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=CCO40_RS18770;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_001519486.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3911568 3912950 . - . ID=gene-CCO40_RS18775;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=CCO40_RS18775;old_locus_tag=CCO40_18775 NZ_CP075116.1 Protein Homology CDS 3911568 3912950 . - 0 ID=cds-WP_001029710.1;Parent=gene-CCO40_RS18775;Dbxref=GenBank:WP_001029710.1;Name=WP_001029710.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=CCO40_RS18775;product=DNA repair protein RadA;protein_id=WP_001029710.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3913034 3914002 . - . ID=gene-CCO40_RS18780;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=CCO40_RS18780;old_locus_tag=CCO40_18780 NZ_CP075116.1 Protein Homology CDS 3913034 3914002 . - 0 ID=cds-WP_001132983.1;Parent=gene-CCO40_RS18780;Dbxref=GenBank:WP_001132983.1;Name=WP_001132983.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463434.1;locus_tag=CCO40_RS18780;product=phosphoserine phosphatase;protein_id=WP_001132983.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3914119 3914763 . + . ID=gene-CCO40_RS18785;Name=CCO40_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18785;old_locus_tag=CCO40_18785 NZ_CP075116.1 Protein Homology CDS 3914119 3914763 . + 0 ID=cds-WP_000090067.1;Parent=gene-CCO40_RS18785;Dbxref=GenBank:WP_000090067.1;Name=WP_000090067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463433.2;locus_tag=CCO40_RS18785;product=YtjB family periplasmic protein;protein_id=WP_000090067.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3914797 3915813 . + . ID=gene-CCO40_RS18790;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;gene_synonym=lplJ;locus_tag=CCO40_RS18790;old_locus_tag=CCO40_18790 NZ_CP075116.1 Protein Homology CDS 3914797 3915813 . + 0 ID=cds-WP_000209756.1;Parent=gene-CCO40_RS18790;Dbxref=GenBank:WP_000209756.1;Name=WP_000209756.1;Ontology_term=GO:0009249,GO:0017118;gbkey=CDS;gene=lplA;go_function=lipoyltransferase activity|0017118||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463432.1;locus_tag=CCO40_RS18790;product=lipoate--protein ligase;protein_id=WP_000209756.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3916126 3916815 . + . ID=gene-CCO40_RS18795;Name=CCO40_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18795;old_locus_tag=CCO40_18795 NZ_CP075116.1 Protein Homology CDS 3916126 3916815 . + 0 ID=cds-WP_023260995.1;Parent=gene-CCO40_RS18795;Dbxref=GenBank:WP_023260995.1;Name=WP_023260995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463431.1;locus_tag=CCO40_RS18795;product=DUF1120 domain-containing protein;protein_id=WP_023260995.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3916863 3917552 . + . ID=gene-CCO40_RS18800;Name=CCO40_RS18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18800;old_locus_tag=CCO40_18800 NZ_CP075116.1 Protein Homology CDS 3916863 3917552 . + 0 ID=cds-WP_000722276.1;Parent=gene-CCO40_RS18800;Dbxref=GenBank:WP_000722276.1;Name=WP_000722276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463430.1;locus_tag=CCO40_RS18800;product=DUF1120 domain-containing protein;protein_id=WP_000722276.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3917630 3918337 . + . ID=gene-CCO40_RS18805;Name=stjC;gbkey=Gene;gene=stjC;gene_biotype=protein_coding;locus_tag=CCO40_RS18805;old_locus_tag=CCO40_18805 NZ_CP075116.1 Protein Homology CDS 3917630 3918337 . + 0 ID=cds-WP_001112036.1;Parent=gene-CCO40_RS18805;Dbxref=GenBank:WP_001112036.1;Name=WP_001112036.1;gbkey=CDS;gene=stjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463429.1;locus_tag=CCO40_RS18805;product=fimbrial biogenesis chaperone StjC;protein_id=WP_001112036.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3918351 3920759 . + . ID=gene-CCO40_RS18810;Name=stjB;gbkey=Gene;gene=stjB;gene_biotype=protein_coding;locus_tag=CCO40_RS18810;old_locus_tag=CCO40_18810 NZ_CP075116.1 Protein Homology CDS 3918351 3920759 . + 0 ID=cds-WP_000876244.1;Parent=gene-CCO40_RS18810;Dbxref=GenBank:WP_000876244.1;Name=WP_000876244.1;gbkey=CDS;gene=stjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463428.1;locus_tag=CCO40_RS18810;product=StjB fimbria biogenesis outer membrane usher protein StjB;protein_id=WP_000876244.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3920756 3921328 . + . ID=gene-CCO40_RS18815;Name=CCO40_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18815;old_locus_tag=CCO40_18815 NZ_CP075116.1 Protein Homology CDS 3920756 3921328 . + 0 ID=cds-WP_000841604.1;Parent=gene-CCO40_RS18815;Dbxref=GenBank:WP_000841604.1;Name=WP_000841604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463427.1;locus_tag=CCO40_RS18815;product=outer membrane protein;protein_id=WP_000841604.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3921366 3922085 . - . ID=gene-CCO40_RS18820;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=CCO40_RS18820;old_locus_tag=CCO40_18820 NZ_CP075116.1 Protein Homology CDS 3921366 3922085 . - 0 ID=cds-WP_000224870.1;Parent=gene-CCO40_RS18820;Dbxref=GenBank:WP_000224870.1;Name=WP_000224870.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463426.1;locus_tag=CCO40_RS18820;product=purine-nucleoside phosphorylase;protein_id=WP_000224870.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3922295 3923518 . - . ID=gene-CCO40_RS18825;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=CCO40_RS18825;old_locus_tag=CCO40_18825 NZ_CP075116.1 Protein Homology CDS 3922295 3923518 . - 0 ID=cds-WP_000816459.1;Parent=gene-CCO40_RS18825;Dbxref=GenBank:WP_000816459.1;Name=WP_000816459.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463425.1;locus_tag=CCO40_RS18825;product=phosphopentomutase;protein_id=WP_000816459.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3923570 3924892 . - . ID=gene-CCO40_RS18830;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=CCO40_RS18830;old_locus_tag=CCO40_18830 NZ_CP075116.1 Protein Homology CDS 3923570 3924892 . - 0 ID=cds-WP_000477844.1;Parent=gene-CCO40_RS18830;Dbxref=GenBank:WP_000477844.1;Name=WP_000477844.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=CCO40_RS18830;product=thymidine phosphorylase;protein_id=WP_000477844.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3925016 3925795 . - . ID=gene-CCO40_RS18835;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=CCO40_RS18835;old_locus_tag=CCO40_18835 NZ_CP075116.1 Protein Homology CDS 3925016 3925795 . - 0 ID=cds-WP_001519713.1;Parent=gene-CCO40_RS18835;Dbxref=GenBank:WP_001519713.1;Name=WP_001519713.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=CCO40_RS18835;product=deoxyribose-phosphate aldolase;protein_id=WP_001519713.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3926055 3927605 . + . ID=gene-CCO40_RS18840;Name=CCO40_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18840;old_locus_tag=CCO40_18840 NZ_CP075116.1 Protein Homology CDS 3926055 3927605 . + 0 ID=cds-WP_001111687.1;Parent=gene-CCO40_RS18840;Dbxref=GenBank:WP_001111687.1;Name=WP_001111687.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463422.1;locus_tag=CCO40_RS18840;product=YjjI family glycine radical enzyme;protein_id=WP_001111687.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3927577 3928440 . + . ID=gene-CCO40_RS18845;Name=CCO40_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18845;old_locus_tag=CCO40_18845 NZ_CP075116.1 Protein Homology CDS 3927577 3928440 . + 0 ID=cds-WP_001064941.1;Parent=gene-CCO40_RS18845;Dbxref=GenBank:WP_001064941.1;Name=WP_001064941.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=CCO40_RS18845;product=YjjW family glycine radical enzyme activase;protein_id=WP_001064941.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3928473 3929246 . - . ID=gene-CCO40_RS18850;Name=CCO40_RS18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18850;old_locus_tag=CCO40_18850 NZ_CP075116.1 Protein Homology CDS 3928473 3929246 . - 0 ID=cds-WP_000119009.1;Parent=gene-CCO40_RS18850;Dbxref=GenBank:WP_000119009.1;Name=WP_000119009.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463420.1;locus_tag=CCO40_RS18850;product=metal-dependent hydrolase;protein_id=WP_000119009.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3929243 3930316 . - . ID=gene-CCO40_RS18855;Name=CCO40_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18855;old_locus_tag=CCO40_18855 NZ_CP075116.1 Protein Homology CDS 3929243 3930316 . - 0 ID=cds-WP_000531546.1;Parent=gene-CCO40_RS18855;Dbxref=GenBank:WP_000531546.1;Name=WP_000531546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=CCO40_RS18855;product=patatin-like phospholipase family protein;protein_id=WP_000531546.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3930440 3930601 . - . ID=gene-CCO40_RS18860;Name=CCO40_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18860;old_locus_tag=CCO40_18860 NZ_CP075116.1 Protein Homology CDS 3930440 3930601 . - 0 ID=cds-WP_000490276.1;Parent=gene-CCO40_RS18860;Dbxref=GenBank:WP_000490276.1;Name=WP_000490276.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=CCO40_RS18860;product=DUF1328 domain-containing protein;protein_id=WP_000490276.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3930730 3931347 . - . ID=gene-CCO40_RS18865;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=CCO40_RS18865;old_locus_tag=CCO40_18865 NZ_CP075116.1 Protein Homology CDS 3930730 3931347 . - 0 ID=cds-WP_000178963.1;Parent=gene-CCO40_RS18865;Dbxref=GenBank:WP_000178963.1;Name=WP_000178963.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463417.1;locus_tag=CCO40_RS18865;product=molecular chaperone OsmY;protein_id=WP_000178963.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3931749 3933338 . - . ID=gene-CCO40_RS18870;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=CCO40_RS18870;old_locus_tag=CCO40_18870 NZ_CP075116.1 Protein Homology CDS 3931749 3933338 . - 0 ID=cds-WP_000175965.1;Parent=gene-CCO40_RS18870;Dbxref=GenBank:WP_000175965.1;Name=WP_000175965.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=CCO40_RS18870;product=peptide chain release factor 3;protein_id=WP_000175965.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3933430 3934107 . - . ID=gene-CCO40_RS18875;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=CCO40_RS18875;old_locus_tag=CCO40_18875 NZ_CP075116.1 Protein Homology CDS 3933430 3934107 . - 0 ID=cds-WP_000870686.1;Parent=gene-CCO40_RS18875;Dbxref=GenBank:WP_000870686.1;Name=WP_000870686.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=CCO40_RS18875;product=pyrimidine 5'-nucleotidase;protein_id=WP_000870686.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3934129 3934575 . - . ID=gene-CCO40_RS18880;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=CCO40_RS18880;old_locus_tag=CCO40_18880 NZ_CP075116.1 Protein Homology CDS 3934129 3934575 . - 0 ID=cds-WP_001092435.1;Parent=gene-CCO40_RS18880;Dbxref=GenBank:WP_001092435.1;Name=WP_001092435.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463414.1;locus_tag=CCO40_RS18880;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092435.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3934520 3934957 . - . ID=gene-CCO40_RS18885;Name=CCO40_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18885;old_locus_tag=CCO40_18885 NZ_CP075116.1 Protein Homology CDS 3934520 3934957 . - 0 ID=cds-WP_000203996.1;Parent=gene-CCO40_RS18885;Dbxref=GenBank:WP_000203996.1;Name=WP_000203996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463413.1;locus_tag=CCO40_RS18885;product=DNA polymerase III subunit psi;protein_id=WP_000203996.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3935060 3936088 . + . ID=gene-CCO40_RS18890;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=CCO40_RS18890;old_locus_tag=CCO40_18890 NZ_CP075116.1 Protein Homology CDS 3935060 3936088 . + 0 ID=cds-WP_001272268.1;Parent=gene-CCO40_RS18890;Dbxref=GenBank:WP_001272268.1;Name=WP_001272268.1;Ontology_term=GO:0006364,GO:0032259,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=CCO40_RS18890;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_001272268.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3936279 3936365 . + . ID=gene-CCO40_RS18895;Name=CCO40_RS18895;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS18895;old_locus_tag=CCO40_18895 NZ_CP075116.1 tRNAscan-SE tRNA 3936279 3936365 . + . ID=rna-CCO40_RS18895;Parent=gene-CCO40_RS18895;anticodon=(pos:3936313..3936315);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS18895;product=tRNA-Leu NZ_CP075116.1 tRNAscan-SE exon 3936279 3936365 . + . ID=exon-CCO40_RS18895-1;Parent=rna-CCO40_RS18895;anticodon=(pos:3936313..3936315);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS18895;product=tRNA-Leu NZ_CP075116.1 RefSeq gene 3936397 3936633 . - . ID=gene-CCO40_RS18900;Name=CCO40_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18900;old_locus_tag=CCO40_18900 NZ_CP075116.1 Protein Homology CDS 3936397 3936633 . - 0 ID=cds-WP_000941877.1;Parent=gene-CCO40_RS18900;Dbxref=GenBank:WP_000941877.1;Name=WP_000941877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463411.1;locus_tag=CCO40_RS18900;product=DUF1435 domain-containing protein;protein_id=WP_000941877.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3936884 3937948 . + . ID=gene-CCO40_RS18905;Name=CCO40_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18905;old_locus_tag=CCO40_18905 NZ_CP075116.1 Protein Homology CDS 3936884 3937948 . + 0 ID=cds-WP_080176742.1;Parent=gene-CCO40_RS18905;Dbxref=GenBank:WP_080176742.1;Name=WP_080176742.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463410.1;locus_tag=CCO40_RS18905;product=GGDEF domain-containing protein;protein_id=WP_080176742.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3938069 3938857 . + . ID=gene-CCO40_RS18910;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=CCO40_RS18910;old_locus_tag=CCO40_18910 NZ_CP075116.1 Protein Homology CDS 3938069 3938857 . + 0 ID=cds-WP_000331539.1;Parent=gene-CCO40_RS18910;Dbxref=GenBank:WP_000331539.1;Name=WP_000331539.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463409.1;locus_tag=CCO40_RS18910;product=siderophore-iron reductase FhuF;protein_id=WP_000331539.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3939008 3939466 . + . ID=gene-CCO40_RS18915;Name=CCO40_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18915;old_locus_tag=CCO40_18915 NZ_CP075116.1 Protein Homology CDS 3939008 3939466 . + 0 ID=cds-WP_000058276.1;Parent=gene-CCO40_RS18915;Dbxref=GenBank:WP_000058276.1;Name=WP_000058276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463408.1;locus_tag=CCO40_RS18915;product=YbaK/EbsC family protein;protein_id=WP_000058276.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3939517 3940191 . - . ID=gene-CCO40_RS18920;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=CCO40_RS18920;old_locus_tag=CCO40_18920 NZ_CP075116.1 Protein Homology CDS 3939517 3940191 . - 0 ID=cds-WP_094889038.1;Parent=gene-CCO40_RS18920;Dbxref=GenBank:WP_094889038.1;Name=WP_094889038.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=CCO40_RS18920;product=DNA-binding transcriptional activator BglJ;protein_id=WP_094889038.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3940152 3940877 . - . ID=gene-CCO40_RS18925;Name=CCO40_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18925;old_locus_tag=CCO40_18925 NZ_CP075116.1 Protein Homology CDS 3940152 3940877 . - 0 ID=cds-WP_000936657.1;Parent=gene-CCO40_RS18925;Dbxref=GenBank:WP_000936657.1;Name=WP_000936657.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463406.1;locus_tag=CCO40_RS18925;product=response regulator transcription factor;protein_id=WP_000936657.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3941590 3942366 . + . ID=gene-CCO40_RS18930;Name=CCO40_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18930;old_locus_tag=CCO40_18930 NZ_CP075116.1 Protein Homology CDS 3941590 3942366 . + 0 ID=cds-WP_001674846.1;Parent=gene-CCO40_RS18930;Dbxref=GenBank:WP_001674846.1;Name=WP_001674846.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=CCO40_RS18930;product=threonine/serine exporter family protein;protein_id=WP_001674846.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3942357 3942830 . + . ID=gene-CCO40_RS18935;Name=CCO40_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18935;old_locus_tag=CCO40_18935 NZ_CP075116.1 Protein Homology CDS 3942357 3942830 . + 0 ID=cds-WP_000511329.1;Parent=gene-CCO40_RS18935;Dbxref=GenBank:WP_000511329.1;Name=WP_000511329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=CCO40_RS18935;product=threonine/serine exporter;protein_id=WP_000511329.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3942923 3943462 . + . ID=gene-CCO40_RS18940;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=CCO40_RS18940;old_locus_tag=CCO40_18940 NZ_CP075116.1 Protein Homology CDS 3942923 3943462 . + 0 ID=cds-WP_000098578.1;Parent=gene-CCO40_RS18940;Dbxref=GenBank:WP_000098578.1;Name=WP_000098578.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463403.1;locus_tag=CCO40_RS18940;product=primosomal protein DnaT;protein_id=WP_000098578.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3943465 3944202 . + . ID=gene-CCO40_RS18945;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=CCO40_RS18945;old_locus_tag=CCO40_18945 NZ_CP075116.1 Protein Homology CDS 3943465 3944202 . + 0 ID=cds-WP_000799924.1;Parent=gene-CCO40_RS18945;Dbxref=GenBank:WP_000799924.1;Name=WP_000799924.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463402.1;locus_tag=CCO40_RS18945;product=replicative helicase loader DnaC;protein_id=WP_000799924.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3944260 3944721 . + . ID=gene-CCO40_RS18950;Name=CCO40_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18950;old_locus_tag=CCO40_18950 NZ_CP075116.1 Protein Homology CDS 3944260 3944721 . + 0 ID=cds-WP_001090314.1;Parent=gene-CCO40_RS18950;Dbxref=GenBank:WP_001090314.1;Name=WP_001090314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463401.1;locus_tag=CCO40_RS18950;product=YjjA family protein;protein_id=WP_001090314.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3945004 3947295 . + . ID=gene-CCO40_RS18955;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=CCO40_RS18955;old_locus_tag=CCO40_18955 NZ_CP075116.1 Protein Homology CDS 3945004 3947295 . + 0 ID=cds-WP_001292726.1;Parent=gene-CCO40_RS18955;Dbxref=GenBank:WP_001292726.1;Name=WP_001292726.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465680.1;locus_tag=CCO40_RS18955;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_001292726.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3947429 3948439 . - . ID=gene-CCO40_RS18960;Name=CCO40_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18960;old_locus_tag=CCO40_18960 NZ_CP075116.1 Protein Homology CDS 3947429 3948439 . - 0 ID=cds-WP_000900307.1;Parent=gene-CCO40_RS18960;Dbxref=GenBank:WP_000900307.1;Name=WP_000900307.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224961.1;locus_tag=CCO40_RS18960;product=SIS domain-containing protein;protein_id=WP_000900307.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3948457 3949518 . - . ID=gene-CCO40_RS18965;Name=CCO40_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18965;old_locus_tag=CCO40_18965 NZ_CP075116.1 Protein Homology CDS 3948457 3949518 . - 0 ID=cds-WP_094889039.1;Parent=gene-CCO40_RS18965;Dbxref=GenBank:WP_094889039.1;Name=WP_094889039.1;Ontology_term=GO:0005975,GO:0016787,GO:0097367;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463398.1;locus_tag=CCO40_RS18965;product=SIS domain-containing protein;protein_id=WP_094889039.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3949531 3950379 . - . ID=gene-CCO40_RS18970;Name=CCO40_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18970;old_locus_tag=CCO40_18970 NZ_CP075116.1 Protein Homology CDS 3949531 3950379 . - 0 ID=cds-WP_000178065.1;Parent=gene-CCO40_RS18970;Dbxref=GenBank:WP_000178065.1;Name=WP_000178065.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224959.1;locus_tag=CCO40_RS18970;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000178065.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3950357 3951136 . - . ID=gene-CCO40_RS18975;Name=CCO40_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18975;old_locus_tag=CCO40_18975 NZ_CP075116.1 Protein Homology CDS 3950357 3951136 . - 0 ID=cds-WP_000228865.1;Parent=gene-CCO40_RS18975;Dbxref=GenBank:WP_000228865.1;Name=WP_000228865.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463396.1;locus_tag=CCO40_RS18975;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000228865.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3951162 3951623 . - . ID=gene-CCO40_RS18980;Name=CCO40_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18980;old_locus_tag=CCO40_18980 NZ_CP075116.1 Protein Homology CDS 3951162 3951623 . - 0 ID=cds-WP_094889040.1;Parent=gene-CCO40_RS18980;Dbxref=GenBank:WP_094889040.1;Name=WP_094889040.1;Ontology_term=GO:0008643,GO:0009401,GO:0034219,GO:0008982,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463395.1;locus_tag=CCO40_RS18980;product=PTS sugar transporter subunit IIB;protein_id=WP_094889040.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3951638 3952060 . - . ID=gene-CCO40_RS18985;Name=CCO40_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18985;old_locus_tag=CCO40_18985 NZ_CP075116.1 Protein Homology CDS 3951638 3952060 . - 0 ID=cds-WP_000820693.1;Parent=gene-CCO40_RS18985;Dbxref=GenBank:WP_000820693.1;Name=WP_000820693.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0034219,GO:0008982,GO:0016301,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463394.1;locus_tag=CCO40_RS18985;product=PTS sugar transporter subunit IIA;protein_id=WP_000820693.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3952162 3954927 . - . ID=gene-CCO40_RS18990;Name=CCO40_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS18990;old_locus_tag=CCO40_18990 NZ_CP075116.1 Protein Homology CDS 3952162 3954927 . - 0 ID=cds-WP_001224211.1;Parent=gene-CCO40_RS18990;Dbxref=GenBank:WP_001224211.1;Name=WP_001224211.1;Ontology_term=GO:0006355,GO:0009401,GO:0001216,GO:0005524,GO:0016301,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=CCO40_RS18990;product=sigma-54-dependent transcriptional regulator;protein_id=WP_001224211.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3955064 3955138 . + . ID=gene-CCO40_RS22730;Name=CCO40_RS22730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22730;partial=true;pseudo=true;start_range=.,3955064 NZ_CP075116.1 Protein Homology CDS 3955064 3955138 . + 0 ID=cds-CCO40_RS22730;Parent=gene-CCO40_RS22730;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012134222.1;locus_tag=CCO40_RS22730;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;start_range=.,3955064;transl_table=11 NZ_CP075116.1 RefSeq gene 3955251 3956912 . - . ID=gene-CCO40_RS18995;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=CCO40_RS18995;old_locus_tag=CCO40_18995 NZ_CP075116.1 Protein Homology CDS 3955251 3956912 . - 0 ID=cds-WP_000919519.1;Parent=gene-CCO40_RS18995;Dbxref=GenBank:WP_000919519.1;Name=WP_000919519.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=CCO40_RS18995;product=methyl-accepting chemotaxis protein;protein_id=WP_000919519.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3957279 3959429 . + . ID=gene-CCO40_RS19000;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=CCO40_RS19000;old_locus_tag=CCO40_19000 NZ_CP075116.1 Protein Homology CDS 3957279 3959429 . + 0 ID=cds-WP_000379927.1;Parent=gene-CCO40_RS19000;Dbxref=GenBank:WP_000379927.1;Name=WP_000379927.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463391.1;locus_tag=CCO40_RS19000;product=pyruvate/proton symporter BtsT;protein_id=WP_000379927.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3959524 3959727 . + . ID=gene-CCO40_RS19005;Name=CCO40_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19005;old_locus_tag=CCO40_19005 NZ_CP075116.1 Protein Homology CDS 3959524 3959727 . + 0 ID=cds-WP_000460616.1;Parent=gene-CCO40_RS19005;Dbxref=GenBank:WP_000460616.1;Name=WP_000460616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463390.1;locus_tag=CCO40_RS19005;product=YbdD/YjiX family protein;protein_id=WP_000460616.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3959738 3960694 . + . ID=gene-CCO40_RS19010;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=CCO40_RS19010;old_locus_tag=CCO40_19010 NZ_CP075116.1 Protein Homology CDS 3959738 3960694 . + 0 ID=cds-WP_000187839.1;Parent=gene-CCO40_RS19010;Dbxref=GenBank:WP_000187839.1;Name=WP_000187839.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463389.1;locus_tag=CCO40_RS19010;product=GTPase;protein_id=WP_000187839.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3960769 3961071 . - . ID=gene-CCO40_RS19015;Name=CCO40_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19015;old_locus_tag=CCO40_19015 NZ_CP075116.1 Protein Homology CDS 3960769 3961071 . - 0 ID=cds-WP_000063142.1;Parent=gene-CCO40_RS19015;Dbxref=GenBank:WP_000063142.1;Name=WP_000063142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463388.1;locus_tag=CCO40_RS19015;product=BrnA antitoxin family protein;protein_id=WP_000063142.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3961058 3961345 . - . ID=gene-CCO40_RS19020;Name=CCO40_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19020;old_locus_tag=CCO40_19020 NZ_CP075116.1 Protein Homology CDS 3961058 3961345 . - 0 ID=cds-WP_001131963.1;Parent=gene-CCO40_RS19020;Dbxref=GenBank:WP_001131963.1;Name=WP_001131963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463387.1;locus_tag=CCO40_RS19020;product=BrnT family toxin;protein_id=WP_001131963.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3961614 3962528 . - . ID=gene-CCO40_RS19025;Name=CCO40_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19025;old_locus_tag=CCO40_19025 NZ_CP075116.1 Protein Homology CDS 3961614 3962528 . - 0 ID=cds-WP_000290512.1;Parent=gene-CCO40_RS19025;Dbxref=GenBank:WP_000290512.1;Name=WP_000290512.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463386.1;locus_tag=CCO40_RS19025;product=restriction endonuclease;protein_id=WP_000290512.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3962726 3966235 . + . ID=gene-CCO40_RS19030;Name=hsdR;gbkey=Gene;gene=hsdR;gene_biotype=protein_coding;locus_tag=CCO40_RS19030;old_locus_tag=CCO40_19030 NZ_CP075116.1 Protein Homology CDS 3962726 3966235 . + 0 ID=cds-WP_001043484.1;Parent=gene-CCO40_RS19030;Dbxref=GenBank:WP_001043484.1;Name=WP_001043484.1;gbkey=CDS;gene=hsdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463385.1;locus_tag=CCO40_RS19030;product=type I restriction-modification system endonuclease;protein_id=WP_001043484.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3966393 3967982 . + . ID=gene-CCO40_RS19035;Name=hsdM;gbkey=Gene;gene=hsdM;gene_biotype=protein_coding;locus_tag=CCO40_RS19035;old_locus_tag=CCO40_19035 NZ_CP075116.1 Protein Homology CDS 3966393 3967982 . + 0 ID=cds-WP_001063189.1;Parent=gene-CCO40_RS19035;Dbxref=GenBank:WP_001063189.1;Name=WP_001063189.1;gbkey=CDS;gene=hsdM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463384.1;locus_tag=CCO40_RS19035;product=type I restriction-modification system methyltransferase;protein_id=WP_001063189.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3967979 3969388 . + . ID=gene-CCO40_RS19040;Name=CCO40_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19040;old_locus_tag=CCO40_19040 NZ_CP075116.1 Protein Homology CDS 3967979 3969388 . + 0 ID=cds-WP_000014001.1;Parent=gene-CCO40_RS19040;Dbxref=GenBank:WP_000014001.1;Name=WP_000014001.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463383.1;locus_tag=CCO40_RS19040;product=restriction endonuclease subunit S;protein_id=WP_000014001.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3969615 3969947 . + . ID=gene-CCO40_RS19045;Name=symE;gbkey=Gene;gene=symE;gene_biotype=protein_coding;locus_tag=CCO40_RS19045;old_locus_tag=CCO40_19045 NZ_CP075116.1 Protein Homology CDS 3969615 3969947 . + 0 ID=cds-WP_001520547.1;Parent=gene-CCO40_RS19045;Dbxref=GenBank:WP_001520547.1;Name=WP_001520547.1;gbkey=CDS;gene=symE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463382.1;locus_tag=CCO40_RS19045;product=endoribonuclease SymE;protein_id=WP_001520547.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3970021 3970722 . + . ID=gene-CCO40_RS19050;Name=CCO40_RS19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19050;old_locus_tag=CCO40_19050 NZ_CP075116.1 Protein Homology CDS 3970021 3970722 . + 0 ID=cds-WP_001237610.1;Parent=gene-CCO40_RS19050;Dbxref=GenBank:WP_001237610.1;Name=WP_001237610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463381.1;locus_tag=CCO40_RS19050;product=hypothetical protein;protein_id=WP_001237610.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3970797 3970961 . - . ID=gene-CCO40_RS19055;Name=yjiS;gbkey=Gene;gene=yjiS;gene_biotype=protein_coding;locus_tag=CCO40_RS19055;old_locus_tag=CCO40_19055 NZ_CP075116.1 Protein Homology CDS 3970797 3970961 . - 0 ID=cds-WP_000397917.1;Parent=gene-CCO40_RS19055;Dbxref=GenBank:WP_000397917.1;Name=WP_000397917.1;gbkey=CDS;gene=yjiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463380.1;locus_tag=CCO40_RS19055;product=DUF1127 domain-containing protein YjiS;protein_id=WP_000397917.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3970928 3971071 . + . ID=gene-CCO40_RS19060;Name=CCO40_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19060;old_locus_tag=CCO40_19060 NZ_CP075116.1 Protein Homology CDS 3970928 3971071 . + 0 ID=cds-WP_001595639.1;Parent=gene-CCO40_RS19060;Dbxref=GenBank:WP_001595639.1;Name=WP_001595639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463379.1;locus_tag=CCO40_RS19060;product=hypothetical protein;protein_id=WP_001595639.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3971166 3972536 . - . ID=gene-CCO40_RS19065;Name=CCO40_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19065;old_locus_tag=CCO40_19065 NZ_CP075116.1 Protein Homology CDS 3971166 3972536 . - 0 ID=cds-WP_000331428.1;Parent=gene-CCO40_RS19065;Dbxref=GenBank:WP_000331428.1;Name=WP_000331428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463378.1;locus_tag=CCO40_RS19065;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_000331428.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3972717 3973022 . - . ID=gene-CCO40_RS22800;Name=CCO40_RS22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22800 NZ_CP075116.1 Protein Homology CDS 3972717 3973022 . - 0 ID=cds-WP_491018230.1;Parent=gene-CCO40_RS22800;Dbxref=GenBank:WP_491018230.1;Name=WP_491018230.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF054278.1;locus_tag=CCO40_RS22800;product=Rpn/YhgA-type helix-turn-helix domain-containing protein;protein_id=WP_491018230.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 3973119 3973229 . - . ID=gene-CCO40_RS22805;Name=CCO40_RS22805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22805;partial=true;pseudo=true;start_range=.,3973119 NZ_CP075116.1 Protein Homology CDS 3973119 3973229 . - 0 ID=cds-CCO40_RS22805;Parent=gene-CCO40_RS22805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147726.1;locus_tag=CCO40_RS22805;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;start_range=.,3973119;transl_table=11 NZ_CP075116.1 RefSeq gene 3973708 3974949 . + . ID=gene-CCO40_RS19075;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=CCO40_RS19075;old_locus_tag=CCO40_19075 NZ_CP075116.1 Protein Homology CDS 3973708 3974949 . + 0 ID=cds-WP_001188918.1;Parent=gene-CCO40_RS19075;Dbxref=GenBank:WP_001188918.1;Name=WP_001188918.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463376.1;locus_tag=CCO40_RS19075;product=multidrug efflux MFS transporter MdtM;protein_id=WP_001188918.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3975036 3976307 . + . ID=gene-CCO40_RS19080;Name=CCO40_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19080;old_locus_tag=CCO40_19080 NZ_CP075116.1 Protein Homology CDS 3975036 3976307 . + 0 ID=cds-WP_001033032.1;Parent=gene-CCO40_RS19080;Dbxref=GenBank:WP_001033032.1;Name=WP_001033032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463375.1;locus_tag=CCO40_RS19080;product=DUF445 domain-containing protein;protein_id=WP_001033032.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3976527 3977711 . + . ID=gene-CCO40_RS19085;Name=CCO40_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19085;old_locus_tag=CCO40_19085 NZ_CP075116.1 Protein Homology CDS 3976527 3977711 . + 0 ID=cds-WP_000233263.1;Parent=gene-CCO40_RS19085;Dbxref=GenBank:WP_000233263.1;Name=WP_000233263.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463374.1;locus_tag=CCO40_RS19085;product=MFS transporter;protein_id=WP_000233263.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3978584 3979255 . + . ID=gene-CCO40_RS19090;Name=CCO40_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19090;old_locus_tag=CCO40_19090 NZ_CP075116.1 Protein Homology CDS 3978584 3979255 . + 0 ID=cds-WP_000068750.1;Parent=gene-CCO40_RS19090;Dbxref=GenBank:WP_000068750.1;Name=WP_000068750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=CCO40_RS19090;product=nucleoside recognition domain-containing protein;protein_id=WP_000068750.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3979252 3979713 . + . ID=gene-CCO40_RS19095;Name=CCO40_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19095;old_locus_tag=CCO40_19095 NZ_CP075116.1 Protein Homology CDS 3979252 3979713 . + 0 ID=cds-WP_000211979.1;Parent=gene-CCO40_RS19095;Dbxref=GenBank:WP_000211979.1;Name=WP_000211979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463372.1;locus_tag=CCO40_RS19095;product=YjiG family protein;protein_id=WP_000211979.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3979726 3980898 . + . ID=gene-CCO40_RS19100;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=CCO40_RS19100;old_locus_tag=CCO40_19100 NZ_CP075116.1 Protein Homology CDS 3979726 3980898 . + 0 ID=cds-WP_001113064.1;Parent=gene-CCO40_RS19100;Dbxref=GenBank:WP_001113064.1;Name=WP_001113064.1;Ontology_term=GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463371.1;locus_tag=CCO40_RS19100;product=beta-aspartyl-peptidase;protein_id=WP_001113064.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3981017 3981925 . + . ID=gene-CCO40_RS19105;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=CCO40_RS19105;old_locus_tag=CCO40_19105 NZ_CP075116.1 Protein Homology CDS 3981017 3981925 . + 0 ID=cds-WP_000383509.1;Parent=gene-CCO40_RS19105;Dbxref=GenBank:WP_000383509.1;Name=WP_000383509.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463370.1;locus_tag=CCO40_RS19105;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000383509.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3981931 3982665 . - . ID=gene-CCO40_RS19110;Name=cuyB;gbkey=Gene;gene=cuyB;gene_biotype=protein_coding;locus_tag=CCO40_RS19110;old_locus_tag=CCO40_19110 NZ_CP075116.1 Protein Homology CDS 3981931 3982665 . - 0 ID=cds-WP_000683247.1;Parent=gene-CCO40_RS19110;Dbxref=GenBank:WP_000683247.1;Name=WP_000683247.1;gbkey=CDS;gene=cuyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463369.1;locus_tag=CCO40_RS19110;product=cysteate racemase;protein_id=WP_000683247.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3982904 3983434 . - . ID=gene-CCO40_RS19115;Name=CCO40_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19115;old_locus_tag=CCO40_19115 NZ_CP075116.1 Protein Homology CDS 3982904 3983434 . - 0 ID=cds-WP_000907671.1;Parent=gene-CCO40_RS19115;Dbxref=GenBank:WP_000907671.1;Name=WP_000907671.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463368.3;locus_tag=CCO40_RS19115;product=Hcp family type VI secretion system effector;protein_id=WP_000907671.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3984152 3985165 . + . ID=gene-CCO40_RS19120;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CCO40_RS19120;old_locus_tag=CCO40_19120 NZ_CP075116.1 Protein Homology CDS 3984152 3985165 . + 0 ID=cds-WP_001094611.1;Parent=gene-CCO40_RS19120;Dbxref=GenBank:WP_001094611.1;Name=WP_001094611.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463367.1;locus_tag=CCO40_RS19120;product=tryptophan--tRNA ligase;protein_id=WP_001094611.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3985166 3985939 . - . ID=gene-CCO40_RS19125;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=CCO40_RS19125;old_locus_tag=CCO40_19125 NZ_CP075116.1 Protein Homology CDS 3985166 3985939 . - 0 ID=cds-WP_000841654.1;Parent=gene-CCO40_RS19125;Dbxref=GenBank:WP_000841654.1;Name=WP_000841654.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=CCO40_RS19125;product=Uxu operon transcriptional regulator;protein_id=WP_000841654.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3986289 3986954 . + . ID=gene-CCO40_RS19130;Name=CCO40_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19130;old_locus_tag=CCO40_19130 NZ_CP075116.1 Protein Homology CDS 3986289 3986954 . + 0 ID=cds-WP_000588685.1;Parent=gene-CCO40_RS19130;Dbxref=GenBank:WP_000588685.1;Name=WP_000588685.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000588696.1;locus_tag=CCO40_RS19130;product=dienelactone hydrolase family protein;protein_id=WP_000588685.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3986971 3987432 . - . ID=gene-CCO40_RS19135;Name=CCO40_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19135;old_locus_tag=CCO40_19135 NZ_CP075116.1 Protein Homology CDS 3986971 3987432 . - 0 ID=cds-WP_001682584.1;Parent=gene-CCO40_RS19135;Dbxref=GenBank:WP_001682584.1;Name=WP_001682584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463364.1;locus_tag=CCO40_RS19135;product=DUF302 domain-containing protein;protein_id=WP_001682584.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3987637 3988548 . - . ID=gene-CCO40_RS19140;Name=CCO40_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19140;old_locus_tag=CCO40_19140 NZ_CP075116.1 Protein Homology CDS 3987637 3988548 . - 0 ID=cds-WP_045717541.1;Parent=gene-CCO40_RS19140;Dbxref=GenBank:WP_045717541.1;Name=WP_045717541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463363.1;locus_tag=CCO40_RS19140;product=STM4504/CBY_0614 family protein;protein_id=WP_045717541.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3988824 3989819 . - . ID=gene-CCO40_RS19145;Name=CCO40_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19145;old_locus_tag=CCO40_19145 NZ_CP075116.1 Protein Homology CDS 3988824 3989819 . - 0 ID=cds-WP_001240360.1;Parent=gene-CCO40_RS19145;Dbxref=GenBank:WP_001240360.1;Name=WP_001240360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001240361.1;locus_tag=CCO40_RS19145;product=PDDEXK family nuclease;protein_id=WP_001240360.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3990071 3990679 . - . ID=gene-CCO40_RS19150;Name=CCO40_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19150;old_locus_tag=CCO40_19150 NZ_CP075116.1 Protein Homology CDS 3990071 3990679 . - 0 ID=cds-WP_023193203.1;Parent=gene-CCO40_RS19150;Dbxref=GenBank:WP_023193203.1;Name=WP_023193203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463361.1;locus_tag=CCO40_RS19150;product=DUF1062 domain-containing protein;protein_id=WP_023193203.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3991167 3991424 . + . ID=gene-CCO40_RS19155;Name=CCO40_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19155;old_locus_tag=CCO40_19155 NZ_CP075116.1 Protein Homology CDS 3991167 3991424 . + 0 ID=cds-WP_001054381.1;Parent=gene-CCO40_RS19155;Dbxref=GenBank:WP_001054381.1;Name=WP_001054381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463360.1;locus_tag=CCO40_RS19155;product=YjhX family toxin;protein_id=WP_001054381.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3991429 3993060 . + . ID=gene-CCO40_RS19160;Name=CCO40_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19160;old_locus_tag=CCO40_19160 NZ_CP075116.1 Protein Homology CDS 3991429 3993060 . + 0 ID=cds-WP_077929589.1;Parent=gene-CCO40_RS19160;Dbxref=GenBank:WP_077929589.1;Name=WP_077929589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=CCO40_RS19160;product=methyltransferase domain-containing protein;protein_id=WP_077929589.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3993620 3994336 . + . ID=gene-CCO40_RS19165;Name=CCO40_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19165;old_locus_tag=CCO40_19165 NZ_CP075116.1 Protein Homology CDS 3993620 3994336 . + 0 ID=cds-WP_000532937.1;Parent=gene-CCO40_RS19165;Dbxref=GenBank:WP_000532937.1;Name=WP_000532937.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310807.1;locus_tag=CCO40_RS19165;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000532937.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3994816 3995691 . - . ID=gene-CCO40_RS19170;Name=CCO40_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19170;old_locus_tag=CCO40_19170 NZ_CP075116.1 Protein Homology CDS 3994816 3995691 . - 0 ID=cds-WP_000199880.1;Parent=gene-CCO40_RS19170;Dbxref=GenBank:WP_000199880.1;Name=WP_000199880.1;Ontology_term=GO:0009307,GO:0015666;gbkey=CDS;go_function=restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465694.1;locus_tag=CCO40_RS19170;product=phosphorothioated DNA-binding restriction endonuclease;protein_id=WP_000199880.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3996044 3996466 . - . ID=gene-CCO40_RS19175;Name=CCO40_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19175;old_locus_tag=CCO40_19175 NZ_CP075116.1 Protein Homology CDS 3996044 3996466 . - 0 ID=cds-WP_000941934.1;Parent=gene-CCO40_RS19175;Dbxref=GenBank:WP_000941934.1;Name=WP_000941934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000941934.1;locus_tag=CCO40_RS19175;product=fosfomycin resistance glutathione transferase FosA7;protein_id=WP_000941934.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3996590 3996757 . + . ID=gene-CCO40_RS19180;Name=CCO40_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19180;old_locus_tag=CCO40_19180 NZ_CP075116.1 GeneMarkS-2+ CDS 3996590 3996757 . + 0 ID=cds-WP_153676275.1;Parent=gene-CCO40_RS19180;Dbxref=GenBank:WP_153676275.1;Name=WP_153676275.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO40_RS19180;product=hypothetical protein;protein_id=WP_153676275.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3996899 3999016 . - . ID=gene-CCO40_RS19185;Name=CCO40_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19185;old_locus_tag=CCO40_19185 NZ_CP075116.1 Protein Homology CDS 3996899 3999016 . - 0 ID=cds-WP_000155072.1;Parent=gene-CCO40_RS19185;Dbxref=GenBank:WP_000155072.1;Name=WP_000155072.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000155072.1;locus_tag=CCO40_RS19185;product=ATP-dependent helicase;protein_id=WP_000155072.1;transl_table=11 NZ_CP075116.1 RefSeq gene 3999013 4005354 . - . ID=gene-CCO40_RS19190;Name=CCO40_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19190;old_locus_tag=CCO40_19190 NZ_CP075116.1 Protein Homology CDS 3999013 4005354 . - 0 ID=cds-WP_094889041.1;Parent=gene-CCO40_RS19190;Dbxref=GenBank:WP_094889041.1;Name=WP_094889041.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313290.1;locus_tag=CCO40_RS19190;product=DEAD/DEAH box helicase family protein;protein_id=WP_094889041.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4005354 4010276 . - . ID=gene-CCO40_RS19195;Name=CCO40_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19195;old_locus_tag=CCO40_19195 NZ_CP075116.1 Protein Homology CDS 4005354 4010276 . - 0 ID=cds-WP_001229651.1;Parent=gene-CCO40_RS19195;Dbxref=GenBank:WP_001229651.1;Name=WP_001229651.1;Ontology_term=GO:0006304,GO:0032259,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001229651.1;locus_tag=CCO40_RS19195;product=DNA methyltransferase family protein;protein_id=WP_001229651.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4010279 4013137 . - . ID=gene-CCO40_RS19200;Name=CCO40_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19200;old_locus_tag=CCO40_19200 NZ_CP075116.1 Protein Homology CDS 4010279 4013137 . - 0 ID=cds-WP_001041499.1;Parent=gene-CCO40_RS19200;Dbxref=GenBank:WP_001041499.1;Name=WP_001041499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313288.2;locus_tag=CCO40_RS19200;product=DEAD/DEAH box helicase;protein_id=WP_001041499.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4013755 4014534 . - . ID=gene-CCO40_RS19205;Name=CCO40_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19205;old_locus_tag=CCO40_19205 NZ_CP075116.1 Protein Homology CDS 4013755 4014534 . - 0 ID=cds-WP_001088805.1;Parent=gene-CCO40_RS19205;Dbxref=GenBank:WP_001088805.1;Name=WP_001088805.1;Ontology_term=GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012737308.1;locus_tag=CCO40_RS19205;product=HNH endonuclease;protein_id=WP_001088805.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4014695 4015009 . + . ID=gene-CCO40_RS19210;Name=CCO40_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19210;old_locus_tag=CCO40_19210 NZ_CP075116.1 Protein Homology CDS 4014695 4015009 . + 0 ID=cds-WP_000936735.1;Parent=gene-CCO40_RS19210;Dbxref=GenBank:WP_000936735.1;Name=WP_000936735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000936735.1;locus_tag=CCO40_RS19210;product=hypothetical protein;protein_id=WP_000936735.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4015006 4015293 . - . ID=gene-CCO40_RS19215;Name=CCO40_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19215;old_locus_tag=CCO40_19215 NZ_CP075116.1 Protein Homology CDS 4015006 4015293 . - 0 ID=cds-WP_001682583.1;Parent=gene-CCO40_RS19215;Dbxref=GenBank:WP_001682583.1;Name=WP_001682583.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463347.1;locus_tag=CCO40_RS19215;product=Arm DNA-binding domain-containing protein;protein_id=WP_001682583.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4015512 4015596 . - . ID=gene-CCO40_RS19220;Name=CCO40_RS19220;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS19220;old_locus_tag=CCO40_19220 NZ_CP075116.1 tRNAscan-SE tRNA 4015512 4015596 . - . ID=rna-CCO40_RS19220;Parent=gene-CCO40_RS19220;anticodon=(pos:complement(4015560..4015562));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS19220;product=tRNA-Leu NZ_CP075116.1 tRNAscan-SE exon 4015512 4015596 . - . ID=exon-CCO40_RS19220-1;Parent=rna-CCO40_RS19220;anticodon=(pos:complement(4015560..4015562));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS19220;product=tRNA-Leu NZ_CP075116.1 RefSeq gene 4015819 4016838 . + . ID=gene-CCO40_RS19225;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=CCO40_RS19225;old_locus_tag=CCO40_19225 NZ_CP075116.1 Protein Homology CDS 4015819 4016838 . + 0 ID=cds-WP_000152574.1;Parent=gene-CCO40_RS19225;Dbxref=GenBank:WP_000152574.1;Name=WP_000152574.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=CCO40_RS19225;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_000152574.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4016866 4017396 . - . ID=gene-CCO40_RS19230;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=CCO40_RS19230;old_locus_tag=CCO40_19230 NZ_CP075116.1 Protein Homology CDS 4016866 4017396 . - 0 ID=cds-WP_000896756.1;Parent=gene-CCO40_RS19230;Dbxref=GenBank:WP_000896756.1;Name=WP_000896756.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463345.1;locus_tag=CCO40_RS19230;product=gluconokinase;protein_id=WP_000896756.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4017613 4018644 . + . ID=gene-CCO40_RS19235;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=CCO40_RS19235;old_locus_tag=CCO40_19235 NZ_CP075116.1 Protein Homology CDS 4017613 4018644 . + 0 ID=cds-WP_000453356.1;Parent=gene-CCO40_RS19235;Dbxref=GenBank:WP_000453356.1;Name=WP_000453356.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=CCO40_RS19235;product=L-idonate 5-dehydrogenase;protein_id=WP_000453356.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4018669 4019433 . + . ID=gene-CCO40_RS19240;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=CCO40_RS19240;old_locus_tag=CCO40_19240 NZ_CP075116.1 Protein Homology CDS 4018669 4019433 . + 0 ID=cds-WP_000998690.1;Parent=gene-CCO40_RS19240;Dbxref=GenBank:WP_000998690.1;Name=WP_000998690.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463343.1;locus_tag=CCO40_RS19240;product=gluconate 5-dehydrogenase;protein_id=WP_000998690.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4019495 4020814 . + . ID=gene-CCO40_RS19245;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=CCO40_RS19245;old_locus_tag=CCO40_19245 NZ_CP075116.1 Protein Homology CDS 4019495 4020814 . + 0 ID=cds-WP_001128356.1;Parent=gene-CCO40_RS19245;Dbxref=GenBank:WP_001128356.1;Name=WP_001128356.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=CCO40_RS19245;product=gnt-II system L-idonate transporter;protein_id=WP_001128356.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4020878 4021876 . + . ID=gene-CCO40_RS19250;Name=idnR;gbkey=Gene;gene=idnR;gene_biotype=protein_coding;gene_synonym=gntH,yjgS;locus_tag=CCO40_RS19250;old_locus_tag=CCO40_19250 NZ_CP075116.1 Protein Homology CDS 4020878 4021876 . + 0 ID=cds-WP_001244064.1;Parent=gene-CCO40_RS19250;Dbxref=GenBank:WP_001244064.1;Name=WP_001244064.1;Ontology_term=GO:0006355,GO:0019521,GO:0003700;gbkey=CDS;gene=idnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463341.1;locus_tag=CCO40_RS19250;product=DNA-binding transcriptional regulator IdnR;protein_id=WP_001244064.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4022082 4023164 . - . ID=gene-CCO40_RS19255;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=CCO40_RS19255;old_locus_tag=CCO40_19255 NZ_CP075116.1 Protein Homology CDS 4022082 4023164 . - 0 ID=cds-WP_001182242.1;Parent=gene-CCO40_RS19255;Dbxref=GenBank:WP_001182242.1;Name=WP_001182242.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=CCO40_RS19255;product=LPS export ABC transporter permease LptG;protein_id=WP_001182242.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4023164 4024264 . - . ID=gene-CCO40_RS19260;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=CCO40_RS19260;old_locus_tag=CCO40_19260 NZ_CP075116.1 Protein Homology CDS 4023164 4024264 . - 0 ID=cds-WP_000584132.1;Parent=gene-CCO40_RS19260;Dbxref=GenBank:WP_000584132.1;Name=WP_000584132.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463339.1;locus_tag=CCO40_RS19260;product=LPS export ABC transporter permease LptF;protein_id=WP_000584132.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4024328 4024378 . - . ID=gene-CCO40_RS19265;Name=CCO40_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19265;old_locus_tag=CCO40_19265 NZ_CP075116.1 Protein Homology CDS 4024328 4024378 . - 0 ID=cds-WP_212724070.1;Parent=gene-CCO40_RS19265;Dbxref=GenBank:WP_212724070.1;Name=WP_212724070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=CCO40_RS19265;product=hypothetical protein;protein_id=WP_212724070.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4024659 4026170 . + . ID=gene-CCO40_RS19270;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=CCO40_RS19270;old_locus_tag=CCO40_19270 NZ_CP075116.1 Protein Homology CDS 4024659 4026170 . + 0 ID=cds-WP_000397158.1;Parent=gene-CCO40_RS19270;Dbxref=GenBank:WP_000397158.1;Name=WP_000397158.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=CCO40_RS19270;product=leucyl aminopeptidase;protein_id=WP_000397158.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4026307 4026750 . + . ID=gene-CCO40_RS19275;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=CCO40_RS19275;old_locus_tag=CCO40_19275 NZ_CP075116.1 Protein Homology CDS 4026307 4026750 . + 0 ID=cds-WP_001523689.1;Parent=gene-CCO40_RS19275;Dbxref=GenBank:WP_001523689.1;Name=WP_001523689.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=CCO40_RS19275;product=DNA polymerase III subunit chi;protein_id=WP_001523689.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4026750 4029605 . + . ID=gene-CCO40_RS19280;Name=CCO40_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19280;old_locus_tag=CCO40_19280 NZ_CP075116.1 Protein Homology CDS 4026750 4029605 . + 0 ID=cds-WP_023138469.1;Parent=gene-CCO40_RS19280;Dbxref=GenBank:WP_023138469.1;Name=WP_023138469.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=CCO40_RS19280;product=valine--tRNA ligase;protein_id=WP_023138469.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4029747 4030934 . - . ID=gene-CCO40_RS19285;Name=CCO40_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19285;old_locus_tag=CCO40_19285 NZ_CP075116.1 Protein Homology CDS 4029747 4030934 . - 0 ID=cds-WP_001066984.1;Parent=gene-CCO40_RS19285;Dbxref=GenBank:WP_001066984.1;Name=WP_001066984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463334.1;locus_tag=CCO40_RS19285;product=YjgN family protein;protein_id=WP_001066984.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4031129 4031632 . + . ID=gene-CCO40_RS19290;Name=CCO40_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19290;old_locus_tag=CCO40_19290 NZ_CP075116.1 Protein Homology CDS 4031129 4031632 . + 0 ID=cds-WP_001532041.1;Parent=gene-CCO40_RS19290;Dbxref=GenBank:WP_001532041.1;Name=WP_001532041.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=CCO40_RS19290;product=GNAT family N-acetyltransferase;protein_id=WP_001532041.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4031739 4032227 . + . ID=gene-CCO40_RS19295;Name=CCO40_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19295;old_locus_tag=CCO40_19295 NZ_CP075116.1 Protein Homology CDS 4031739 4032227 . + 0 ID=cds-WP_000826193.1;Parent=gene-CCO40_RS19295;Dbxref=GenBank:WP_000826193.1;Name=WP_000826193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463332.1;locus_tag=CCO40_RS19295;product=DUF3617 domain-containing protein;protein_id=WP_000826193.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4032461 4033273 . - . ID=gene-CCO40_RS19300;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=CCO40_RS19300;old_locus_tag=CCO40_19300 NZ_CP075116.1 Protein Homology CDS 4032461 4033273 . - 0 ID=cds-WP_001661908.1;Parent=gene-CCO40_RS19300;Dbxref=GenBank:WP_001661908.1;Name=WP_001661908.1;Ontology_term=GO:0006400,GO:0004497,GO:0045301,GO:0046872;gbkey=CDS;gene=miaE;go_function=monooxygenase activity|0004497||IEA,tRNA 2-(methylsulfanyl)-N(6)-isopentenyladenosine(37) hydroxylase activity|0045301||IEA,metal ion binding|0046872||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463331.1;locus_tag=CCO40_RS19300;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=WP_001661908.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4033285 4033701 . - . ID=gene-CCO40_RS19305;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=CCO40_RS19305;old_locus_tag=CCO40_19305 NZ_CP075116.1 Protein Homology CDS 4033285 4033701 . - 0 ID=cds-WP_000002940.1;Parent=gene-CCO40_RS19305;Dbxref=GenBank:WP_000002940.1;Name=WP_000002940.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463330.1;locus_tag=CCO40_RS19305;product=ribonuclease E inhibitor RraB;protein_id=WP_000002940.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4033802 4033897 . + . ID=gene-CCO40_RS22735;Name=argL;gbkey=Gene;gene=argL;gene_biotype=protein_coding;locus_tag=CCO40_RS22735 NZ_CP075116.1 Protein Homology CDS 4033802 4033897 . + 0 ID=cds-WP_223148976.1;Parent=gene-CCO40_RS22735;Dbxref=GenBank:WP_223148976.1;Name=WP_223148976.1;gbkey=CDS;gene=argL;inference=COORDINATES: protein motif:HMM:NF047283.3;locus_tag=CCO40_RS22735;product=putative translational regulatory protein ArgL;protein_id=WP_223148976.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4033867 4034871 . + . ID=gene-CCO40_RS19310;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CCO40_RS19310;old_locus_tag=CCO40_19310 NZ_CP075116.1 Protein Homology CDS 4033867 4034871 . + 0 ID=cds-WP_000103041.1;Parent=gene-CCO40_RS19310;Dbxref=GenBank:WP_000103041.1;Name=WP_000103041.1;Ontology_term=GO:0006526,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463329.1;locus_tag=CCO40_RS19310;product=ornithine carbamoyltransferase;protein_id=WP_000103041.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4034945 4035397 . - . ID=gene-CCO40_RS19315;Name=CCO40_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19315;old_locus_tag=CCO40_19315 NZ_CP075116.1 Protein Homology CDS 4034945 4035397 . - 0 ID=cds-WP_000583451.1;Parent=gene-CCO40_RS19315;Dbxref=GenBank:WP_000583451.1;Name=WP_000583451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463328.1;locus_tag=CCO40_RS19315;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000583451.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4036072 4037292 . + . ID=gene-CCO40_RS19320;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=CCO40_RS19320;old_locus_tag=CCO40_19320 NZ_CP075116.1 Protein Homology CDS 4036072 4037292 . + 0 ID=cds-WP_000410840.1;Parent=gene-CCO40_RS19320;Dbxref=GenBank:WP_000410840.1;Name=WP_000410840.1;Ontology_term=GO:0006527,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=CCO40_RS19320;product=arginine deiminase;protein_id=WP_000410840.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4037303 4038235 . + . ID=gene-CCO40_RS19325;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=CCO40_RS19325;old_locus_tag=CCO40_19325 NZ_CP075116.1 Protein Homology CDS 4037303 4038235 . + 0 ID=cds-WP_000428751.1;Parent=gene-CCO40_RS19325;Dbxref=GenBank:WP_000428751.1;Name=WP_000428751.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=CCO40_RS19325;product=carbamate kinase;protein_id=WP_000428751.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4038347 4039351 . + . ID=gene-CCO40_RS19330;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CCO40_RS19330;old_locus_tag=CCO40_19330 NZ_CP075116.1 Protein Homology CDS 4038347 4039351 . + 0 ID=cds-WP_000237035.1;Parent=gene-CCO40_RS19330;Dbxref=GenBank:WP_000237035.1;Name=WP_000237035.1;Ontology_term=GO:0006526,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=CCO40_RS19330;product=ornithine carbamoyltransferase;protein_id=WP_000237035.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4039407 4040810 . + . ID=gene-CCO40_RS19335;Name=CCO40_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19335;old_locus_tag=CCO40_19335 NZ_CP075116.1 Protein Homology CDS 4039407 4040810 . + 0 ID=cds-WP_023137599.1;Parent=gene-CCO40_RS19335;Dbxref=GenBank:WP_023137599.1;Name=WP_023137599.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463324.1;locus_tag=CCO40_RS19335;product=YfcC family protein;protein_id=WP_023137599.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4040997 4041485 . + . ID=gene-CCO40_RS19340;Name=CCO40_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19340;old_locus_tag=CCO40_19340 NZ_CP075116.1 Protein Homology CDS 4040997 4041485 . + 0 ID=cds-WP_000666051.1;Parent=gene-CCO40_RS19340;Dbxref=GenBank:WP_000666051.1;Name=WP_000666051.1;Ontology_term=GO:1900079,GO:0003677,GO:0003700,GO:0034618;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of arginine biosynthetic process|1900079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463323.1;locus_tag=CCO40_RS19340;product=arginine repressor;protein_id=WP_000666051.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4041455 4041595 . - . ID=gene-CCO40_RS19345;Name=CCO40_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19345;old_locus_tag=CCO40_19345 NZ_CP075116.1 Protein Homology CDS 4041455 4041595 . - 0 ID=cds-WP_001518160.1;Parent=gene-CCO40_RS19345;Dbxref=GenBank:WP_001518160.1;Name=WP_001518160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=CCO40_RS19345;product=hypothetical protein;protein_id=WP_001518160.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4041575 4041676 . + . ID=gene-CCO40_RS19350;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=CCO40_RS19350;old_locus_tag=CCO40_19350 NZ_CP075116.1 Protein Homology CDS 4041575 4041676 . + 0 ID=cds-WP_000249504.1;Parent=gene-CCO40_RS19350;Dbxref=GenBank:WP_000249504.1;Name=WP_000249504.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=CCO40_RS19350;product=pyr operon leader peptide;protein_id=WP_000249504.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4041712 4042647 . + . ID=gene-CCO40_RS19355;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=CCO40_RS19355;old_locus_tag=CCO40_19355 NZ_CP075116.1 Protein Homology CDS 4041712 4042647 . + 0 ID=cds-WP_000013055.1;Parent=gene-CCO40_RS19355;Dbxref=GenBank:WP_000013055.1;Name=WP_000013055.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463320.1;locus_tag=CCO40_RS19355;product=aspartate carbamoyltransferase;protein_id=WP_000013055.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4042660 4043121 . + . ID=gene-CCO40_RS19360;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=CCO40_RS19360;old_locus_tag=CCO40_19360 NZ_CP075116.1 Protein Homology CDS 4042660 4043121 . + 0 ID=cds-WP_000148570.1;Parent=gene-CCO40_RS19360;Dbxref=GenBank:WP_000148570.1;Name=WP_000148570.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=CCO40_RS19360;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148570.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4043198 4043584 . + . ID=gene-CCO40_RS19365;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=CCO40_RS19365;old_locus_tag=CCO40_19365 NZ_CP075116.1 Protein Homology CDS 4043198 4043584 . + 0 ID=cds-WP_000047544.1;Parent=gene-CCO40_RS19365;Dbxref=GenBank:WP_000047544.1;Name=WP_000047544.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=CCO40_RS19365;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047544.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4043659 4044105 . + . ID=gene-CCO40_RS19370;Name=CCO40_RS19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19370;old_locus_tag=CCO40_19370 NZ_CP075116.1 Protein Homology CDS 4043659 4044105 . + 0 ID=cds-WP_094889042.1;Parent=gene-CCO40_RS19370;Dbxref=GenBank:WP_094889042.1;Name=WP_094889042.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463317.1;locus_tag=CCO40_RS19370;product=transposase;protein_id=WP_094889042.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4044221 4046929 . - . ID=gene-CCO40_RS19375;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=CCO40_RS19375;old_locus_tag=CCO40_19375 NZ_CP075116.1 Protein Homology CDS 4044221 4046929 . - 0 ID=cds-WP_000920862.1;Parent=gene-CCO40_RS19375;Dbxref=GenBank:WP_000920862.1;Name=WP_000920862.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=CCO40_RS19375;product=magnesium-translocating P-type ATPase;protein_id=WP_000920862.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4047070 4047168 . - . ID=gene-CCO40_RS22740;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=CCO40_RS22740;old_locus_tag=CCO40_19380 NZ_CP075116.1 Protein Homology CDS 4047070 4047168 . - 0 ID=cds-WP_105789234.1;Parent=gene-CCO40_RS22740;Dbxref=GenBank:WP_105789234.1;Name=WP_105789234.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: protein motif:HMM:NF028369.6;locus_tag=CCO40_RS22740;product=mgtA regulatory leader peptide MgtL;protein_id=WP_105789234.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4047313 4048260 . + . ID=gene-CCO40_RS19385;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=CCO40_RS19385;old_locus_tag=CCO40_19385 NZ_CP075116.1 Protein Homology CDS 4047313 4048260 . + 0 ID=cds-WP_001181297.1;Parent=gene-CCO40_RS19385;Dbxref=GenBank:WP_001181297.1;Name=WP_001181297.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463315.1;locus_tag=CCO40_RS19385;product=trehalose operon repressor TreR;protein_id=WP_001181297.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4048398 4049816 . + . ID=gene-CCO40_RS19390;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=CCO40_RS19390;old_locus_tag=CCO40_19390 NZ_CP075116.1 Protein Homology CDS 4048398 4049816 . + 0 ID=cds-WP_061378445.1;Parent=gene-CCO40_RS19390;Dbxref=GenBank:WP_061378445.1;Name=WP_061378445.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=CCO40_RS19390;product=PTS trehalose transporter subunit IIBC;protein_id=WP_061378445.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4049866 4051518 . + . ID=gene-CCO40_RS19395;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=CCO40_RS19395;old_locus_tag=CCO40_19395 NZ_CP075116.1 Protein Homology CDS 4049866 4051518 . + 0 ID=cds-WP_061378443.1;Parent=gene-CCO40_RS19395;Dbxref=GenBank:WP_061378443.1;Name=WP_061378443.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463314.1;locus_tag=CCO40_RS19395;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_061378443.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4051927 4054065 . + . ID=gene-CCO40_RS19400;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=CCO40_RS19400;old_locus_tag=CCO40_19400 NZ_CP075116.1 Protein Homology CDS 4051927 4054065 . + 0 ID=cds-WP_000187818.1;Parent=gene-CCO40_RS19400;Dbxref=GenBank:WP_000187818.1;Name=WP_000187818.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=CCO40_RS19400;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000187818.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4054282 4054746 . + . ID=gene-CCO40_RS19405;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=CCO40_RS19405;old_locus_tag=CCO40_19405 NZ_CP075116.1 Protein Homology CDS 4054282 4054746 . + 0 ID=cds-WP_001009173.1;Parent=gene-CCO40_RS19405;Dbxref=GenBank:WP_001009173.1;Name=WP_001009173.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=CCO40_RS19405;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_001009173.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4054750 4055034 . - . ID=gene-CCO40_RS19410;Name=CCO40_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19410;old_locus_tag=CCO40_19410 NZ_CP075116.1 Protein Homology CDS 4054750 4055034 . - 0 ID=cds-WP_000220578.1;Parent=gene-CCO40_RS19410;Dbxref=GenBank:WP_000220578.1;Name=WP_000220578.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463311.1;locus_tag=CCO40_RS19410;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000220578.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4055024 4055266 . - . ID=gene-CCO40_RS19415;Name=CCO40_RS19415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19415;old_locus_tag=CCO40_19415 NZ_CP075116.1 Protein Homology CDS 4055024 4055266 . - 0 ID=cds-WP_000212724.1;Parent=gene-CCO40_RS19415;Dbxref=GenBank:WP_000212724.1;Name=WP_000212724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463310.1;locus_tag=CCO40_RS19415;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_000212724.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4055344 4057257 . - . ID=gene-CCO40_RS19420;Name=CCO40_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19420;old_locus_tag=CCO40_19420 NZ_CP075116.1 Protein Homology CDS 4055344 4057257 . - 0 ID=cds-WP_001212135.1;Parent=gene-CCO40_RS19420;Dbxref=GenBank:WP_001212135.1;Name=WP_001212135.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463309.1;locus_tag=CCO40_RS19420;product=BglG family transcription antiterminator;protein_id=WP_001212135.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4057274 4058014 . - . ID=gene-CCO40_RS19425;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=CCO40_RS19425;old_locus_tag=CCO40_19425 NZ_CP075116.1 Protein Homology CDS 4057274 4058014 . - 0 ID=cds-WP_094889043.1;Parent=gene-CCO40_RS19425;Dbxref=GenBank:WP_094889043.1;Name=WP_094889043.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463308.2;locus_tag=CCO40_RS19425;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_094889043.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4058011 4059129 . - . ID=gene-CCO40_RS19430;Name=CCO40_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19430;old_locus_tag=CCO40_19430 NZ_CP075116.1 Protein Homology CDS 4058011 4059129 . - 0 ID=cds-WP_094889044.1;Parent=gene-CCO40_RS19430;Dbxref=GenBank:WP_094889044.1;Name=WP_094889044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463307.1;locus_tag=CCO40_RS19430;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WP_094889044.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4059113 4060246 . - . ID=gene-CCO40_RS19435;Name=CCO40_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19435;old_locus_tag=CCO40_19435 NZ_CP075116.1 Protein Homology CDS 4059113 4060246 . - 0 ID=cds-WP_079986648.1;Parent=gene-CCO40_RS19435;Dbxref=GenBank:WP_079986648.1;Name=WP_079986648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463306.1;locus_tag=CCO40_RS19435;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WP_079986648.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4060305 4060949 . - . ID=gene-CCO40_RS19440;Name=CCO40_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19440;old_locus_tag=CCO40_19440 NZ_CP075116.1 Protein Homology CDS 4060305 4060949 . - 0 ID=cds-WP_000392128.1;Parent=gene-CCO40_RS19440;Dbxref=GenBank:WP_000392128.1;Name=WP_000392128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463305.1;locus_tag=CCO40_RS19440;product=DUF4310 family protein;protein_id=WP_000392128.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4060961 4061737 . - . ID=gene-CCO40_RS19445;Name=CCO40_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19445;old_locus_tag=CCO40_19445 NZ_CP075116.1 Protein Homology CDS 4060961 4061737 . - 0 ID=cds-WP_000478578.1;Parent=gene-CCO40_RS19445;Dbxref=GenBank:WP_000478578.1;Name=WP_000478578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463304.1;locus_tag=CCO40_RS19445;product=DUF4311 domain-containing protein;protein_id=WP_000478578.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4061760 4062062 . - . ID=gene-CCO40_RS19450;Name=CCO40_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19450;old_locus_tag=CCO40_19450 NZ_CP075116.1 Protein Homology CDS 4061760 4062062 . - 0 ID=cds-WP_000975187.1;Parent=gene-CCO40_RS19450;Dbxref=GenBank:WP_000975187.1;Name=WP_000975187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463303.1;locus_tag=CCO40_RS19450;product=DUF4312 family protein;protein_id=WP_000975187.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4062062 4062424 . - . ID=gene-CCO40_RS19455;Name=CCO40_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19455;old_locus_tag=CCO40_19455 NZ_CP075116.1 Protein Homology CDS 4062062 4062424 . - 0 ID=cds-WP_000435389.1;Parent=gene-CCO40_RS19455;Dbxref=GenBank:WP_000435389.1;Name=WP_000435389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=CCO40_RS19455;product=SFCGS family glycine-rich protein;protein_id=WP_000435389.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4062435 4062773 . - . ID=gene-CCO40_RS19460;Name=CCO40_RS19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19460;old_locus_tag=CCO40_19460 NZ_CP075116.1 Protein Homology CDS 4062435 4062773 . - 0 ID=cds-WP_001255103.1;Parent=gene-CCO40_RS19460;Dbxref=GenBank:WP_001255103.1;Name=WP_001255103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463301.1;locus_tag=CCO40_RS19460;product=glycine dehydrogenase;protein_id=WP_001255103.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4063061 4063447 . - . ID=gene-CCO40_RS19465;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=CCO40_RS19465;old_locus_tag=CCO40_19465 NZ_CP075116.1 Protein Homology CDS 4063061 4063447 . - 0 ID=cds-WP_001232231.1;Parent=gene-CCO40_RS19465;Dbxref=GenBank:WP_001232231.1;Name=WP_001232231.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463300.1;locus_tag=CCO40_RS19465;product=cytochrome b562;protein_id=WP_001232231.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4063546 4064898 . - . ID=gene-CCO40_RS19470;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=CCO40_RS19470;old_locus_tag=CCO40_19470 NZ_CP075116.1 Protein Homology CDS 4063546 4064898 . - 0 ID=cds-WP_000852994.1;Parent=gene-CCO40_RS19470;Dbxref=GenBank:WP_000852994.1;Name=WP_000852994.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=CCO40_RS19470;product=metalloprotease PmbA;protein_id=WP_000852994.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4064994 4065545 . + . ID=gene-CCO40_RS19475;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=CCO40_RS19475;old_locus_tag=CCO40_19475 NZ_CP075116.1 Protein Homology CDS 4064994 4065545 . + 0 ID=cds-WP_000166287.1;Parent=gene-CCO40_RS19475;Dbxref=GenBank:WP_000166287.1;Name=WP_000166287.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463298.1;locus_tag=CCO40_RS19475;product=ribosome biogenesis factor YjgA;protein_id=WP_000166287.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4065601 4066485 . - . ID=gene-CCO40_RS19480;Name=iolH;gbkey=Gene;gene=iolH;gene_biotype=protein_coding;locus_tag=CCO40_RS19480;old_locus_tag=CCO40_19480 NZ_CP075116.1 Protein Homology CDS 4065601 4066485 . - 0 ID=cds-WP_000683955.1;Parent=gene-CCO40_RS19480;Dbxref=GenBank:WP_000683955.1;Name=WP_000683955.1;gbkey=CDS;gene=iolH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463297.1;locus_tag=CCO40_RS19480;product=sugar phosphate isomerase/epimerase IolH;protein_id=WP_000683955.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4066538 4067353 . - . ID=gene-CCO40_RS19485;Name=iolI2;gbkey=Gene;gene=iolI2;gene_biotype=protein_coding;locus_tag=CCO40_RS19485;old_locus_tag=CCO40_19485 NZ_CP075116.1 Protein Homology CDS 4066538 4067353 . - 0 ID=cds-WP_023250235.1;Parent=gene-CCO40_RS19485;Dbxref=GenBank:WP_023250235.1;Name=WP_023250235.1;gbkey=CDS;gene=iolI2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463296.1;locus_tag=CCO40_RS19485;product=2-keto-myo-inositol isomerase IolI2;protein_id=WP_023250235.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4067514 4068740 . - . ID=gene-CCO40_RS19490;Name=CCO40_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19490;old_locus_tag=CCO40_19490 NZ_CP075116.1 Protein Homology CDS 4067514 4068740 . - 0 ID=cds-WP_000661783.1;Parent=gene-CCO40_RS19490;Dbxref=GenBank:WP_000661783.1;Name=WP_000661783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463295.1;locus_tag=CCO40_RS19490;product=MFS transporter;protein_id=WP_000661783.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4068813 4069835 . - . ID=gene-CCO40_RS19495;Name=iolG2;gbkey=Gene;gene=iolG2;gene_biotype=protein_coding;locus_tag=CCO40_RS19495;old_locus_tag=CCO40_19495 NZ_CP075116.1 Protein Homology CDS 4068813 4069835 . - 0 ID=cds-WP_000413617.1;Parent=gene-CCO40_RS19495;Dbxref=GenBank:WP_000413617.1;Name=WP_000413617.1;gbkey=CDS;gene=iolG2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463294.1;locus_tag=CCO40_RS19495;product=D-chiro-inositol-2-dehydrogenase IolG2;protein_id=WP_000413617.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4070016 4071956 . - . ID=gene-CCO40_RS19500;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=CCO40_RS19500;old_locus_tag=CCO40_19500 NZ_CP075116.1 Protein Homology CDS 4070016 4071956 . - 0 ID=cds-WP_000849477.1;Parent=gene-CCO40_RS19500;Dbxref=GenBank:WP_000849477.1;Name=WP_000849477.1;Ontology_term=GO:0019310,GO:0016823,GO:0030976;gbkey=CDS;gene=iolD;go_function=hydrolase activity%2C acting on carbon-carbon bonds%2C in ketonic substances|0016823||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453702.1;locus_tag=CCO40_RS19500;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=WP_000849477.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4072373 4074310 . + . ID=gene-CCO40_RS19505;Name=CCO40_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19505;old_locus_tag=CCO40_19505 NZ_CP075116.1 Protein Homology CDS 4072373 4074310 . + 0 ID=cds-WP_014343940.1;Parent=gene-CCO40_RS19505;Dbxref=GenBank:WP_014343940.1;Name=WP_014343940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453701.1;locus_tag=CCO40_RS19505;product=bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2-deoxyphosphogluconate aldolase;protein_id=WP_014343940.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4074371 4075537 . + . ID=gene-CCO40_RS19510;Name=CCO40_RS19510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19510;old_locus_tag=CCO40_19510 NZ_CP075116.1 Protein Homology CDS 4074371 4075537 . + 0 ID=cds-WP_045717435.1;Parent=gene-CCO40_RS19510;Dbxref=GenBank:WP_045717435.1;Name=WP_045717435.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463289.1;locus_tag=CCO40_RS19510;product=MFS transporter;protein_id=WP_045717435.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4075534 4076367 . - . ID=gene-CCO40_RS19515;Name=iolI1;gbkey=Gene;gene=iolI1;gene_biotype=protein_coding;locus_tag=CCO40_RS19515;old_locus_tag=CCO40_19515 NZ_CP075116.1 Protein Homology CDS 4075534 4076367 . - 0 ID=cds-WP_000976927.1;Parent=gene-CCO40_RS19515;Dbxref=GenBank:WP_000976927.1;Name=WP_000976927.1;gbkey=CDS;gene=iolI1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463288.1;locus_tag=CCO40_RS19515;product=2-keto-myo-inositol isomerase IolI1;protein_id=WP_000976927.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4076368 4077711 . - . ID=gene-CCO40_RS19520;Name=srfJ;gbkey=Gene;gene=srfJ;gene_biotype=protein_coding;locus_tag=CCO40_RS19520;old_locus_tag=CCO40_19520 NZ_CP075116.1 Protein Homology CDS 4076368 4077711 . - 0 ID=cds-WP_045717436.1;Parent=gene-CCO40_RS19520;Dbxref=GenBank:WP_045717436.1;Name=WP_045717436.1;gbkey=CDS;gene=srfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463287.1;locus_tag=CCO40_RS19520;product=lysosomal glucosyl ceramidase-like type III secretion effector SrfJ;protein_id=WP_045717436.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4077808 4078818 . - . ID=gene-CCO40_RS19525;Name=iolG1;gbkey=Gene;gene=iolG1;gene_biotype=protein_coding;locus_tag=CCO40_RS19525;old_locus_tag=CCO40_19525 NZ_CP075116.1 Protein Homology CDS 4077808 4078818 . - 0 ID=cds-WP_000172704.1;Parent=gene-CCO40_RS19525;Dbxref=GenBank:WP_000172704.1;Name=WP_000172704.1;gbkey=CDS;gene=iolG1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463286.1;locus_tag=CCO40_RS19525;product=inositol 2-dehydrogenase IolG1;protein_id=WP_000172704.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4078837 4079757 . - . ID=gene-CCO40_RS19530;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=CCO40_RS19530;old_locus_tag=CCO40_19530 NZ_CP075116.1 Protein Homology CDS 4078837 4079757 . - 0 ID=cds-WP_012601329.1;Parent=gene-CCO40_RS19530;Dbxref=GenBank:WP_012601329.1;Name=WP_012601329.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463285.3;locus_tag=CCO40_RS19530;product=myo-inosose-2 dehydratase;protein_id=WP_012601329.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4080017 4080841 . - . ID=gene-CCO40_RS19535;Name=reiD;gbkey=Gene;gene=reiD;gene_biotype=protein_coding;locus_tag=CCO40_RS19535;old_locus_tag=CCO40_19535 NZ_CP075116.1 Protein Homology CDS 4080017 4080841 . - 0 ID=cds-WP_000332219.1;Parent=gene-CCO40_RS19535;Dbxref=GenBank:WP_000332219.1;Name=WP_000332219.1;gbkey=CDS;gene=reiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000332219.1;locus_tag=CCO40_RS19535;product=myo-inositol utilization transcriptional regulator ReiD;protein_id=WP_000332219.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4080964 4081266 . + . ID=gene-CCO40_RS19540;Name=CCO40_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19540;old_locus_tag=CCO40_19540 NZ_CP075116.1 Protein Homology CDS 4080964 4081266 . + 0 ID=cds-WP_071588223.1;Parent=gene-CCO40_RS19540;Dbxref=GenBank:WP_071588223.1;Name=WP_071588223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453693.1;locus_tag=CCO40_RS19540;product=hypothetical protein;protein_id=WP_071588223.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4081282 4082787 . + . ID=gene-CCO40_RS19545;Name=iolA;gbkey=Gene;gene=iolA;gene_biotype=protein_coding;locus_tag=CCO40_RS19545;old_locus_tag=CCO40_19545 NZ_CP075116.1 Protein Homology CDS 4081282 4082787 . + 0 ID=cds-WP_000450729.1;Parent=gene-CCO40_RS19545;Dbxref=GenBank:WP_000450729.1;Name=WP_000450729.1;gbkey=CDS;gene=iolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463282.1;locus_tag=CCO40_RS19545;product=malonate-semialdehyde dehydrogenase IolA;protein_id=WP_000450729.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4082812 4083621 . + . ID=gene-CCO40_RS19550;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=CCO40_RS19550;old_locus_tag=CCO40_19550 NZ_CP075116.1 Protein Homology CDS 4082812 4083621 . + 0 ID=cds-WP_000002010.1;Parent=gene-CCO40_RS19550;Dbxref=GenBank:WP_000002010.1;Name=WP_000002010.1;Ontology_term=GO:0019310,GO:0016861;gbkey=CDS;gene=iolB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463281.1;locus_tag=CCO40_RS19550;product=5-deoxy-glucuronate isomerase;protein_id=WP_000002010.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4083974 4085410 . - . ID=gene-CCO40_RS19555;Name=iolT2;gbkey=Gene;gene=iolT2;gene_biotype=protein_coding;locus_tag=CCO40_RS19555;old_locus_tag=CCO40_19555 NZ_CP075116.1 Protein Homology CDS 4083974 4085410 . - 0 ID=cds-WP_000083109.1;Parent=gene-CCO40_RS19555;Dbxref=GenBank:WP_000083109.1;Name=WP_000083109.1;gbkey=CDS;gene=iolT2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463280.1;locus_tag=CCO40_RS19555;product=myo-inositol import MFS transporter IolT2;protein_id=WP_000083109.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4085447 4085641 . + . ID=gene-CCO40_RS19560;Name=CCO40_RS19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19560;old_locus_tag=CCO40_19560 NZ_CP075116.1 GeneMarkS-2+ CDS 4085447 4085641 . + 0 ID=cds-WP_000667714.1;Parent=gene-CCO40_RS19560;Dbxref=GenBank:WP_000667714.1;Name=WP_000667714.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO40_RS19560;product=hypothetical protein;protein_id=WP_000667714.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4085869 4087302 . + . ID=gene-CCO40_RS19565;Name=iolT1;gbkey=Gene;gene=iolT1;gene_biotype=protein_coding;locus_tag=CCO40_RS19565;old_locus_tag=CCO40_19565 NZ_CP075116.1 Protein Homology CDS 4085869 4087302 . + 0 ID=cds-WP_000107710.1;Parent=gene-CCO40_RS19565;Dbxref=GenBank:WP_000107710.1;Name=WP_000107710.1;gbkey=CDS;gene=iolT1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463279.1;locus_tag=CCO40_RS19565;product=myo-inositol import MFS transporter IolT1;protein_id=WP_000107710.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4087353 4088186 . - . ID=gene-CCO40_RS19570;Name=iolR;gbkey=Gene;gene=iolR;gene_biotype=protein_coding;locus_tag=CCO40_RS19570;old_locus_tag=CCO40_19570 NZ_CP075116.1 Protein Homology CDS 4087353 4088186 . - 0 ID=cds-WP_000033840.1;Parent=gene-CCO40_RS19570;Dbxref=GenBank:WP_000033840.1;Name=WP_000033840.1;gbkey=CDS;gene=iolR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463278.1;locus_tag=CCO40_RS19570;product=myo-inositol utilization transcriptional regulator IolR;protein_id=WP_000033840.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4088678 4090057 . - . ID=gene-CCO40_RS19575;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=CCO40_RS19575;old_locus_tag=CCO40_19575 NZ_CP075116.1 Protein Homology CDS 4088678 4090057 . - 0 ID=cds-WP_094889045.1;Parent=gene-CCO40_RS19575;Dbxref=GenBank:WP_094889045.1;Name=WP_094889045.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463277.1;locus_tag=CCO40_RS19575;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_094889045.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4090232 4091230 . + . ID=gene-CCO40_RS19580;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=CCO40_RS19580;old_locus_tag=CCO40_19580 NZ_CP075116.1 Protein Homology CDS 4090232 4091230 . + 0 ID=cds-WP_000853764.1;Parent=gene-CCO40_RS19580;Dbxref=GenBank:WP_000853764.1;Name=WP_000853764.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=CCO40_RS19580;product=class 1 fructose-bisphosphatase;protein_id=WP_000853764.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4091457 4091987 . + . ID=gene-CCO40_RS19585;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=CCO40_RS19585;old_locus_tag=CCO40_19585 NZ_CP075116.1 Protein Homology CDS 4091457 4091987 . + 0 ID=cds-WP_000055079.1;Parent=gene-CCO40_RS19585;Dbxref=GenBank:WP_000055079.1;Name=WP_000055079.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=CCO40_RS19585;product=inorganic diphosphatase;protein_id=WP_000055079.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4092397 4093560 . + . ID=gene-CCO40_RS19590;Name=CCO40_RS19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19590;old_locus_tag=CCO40_19590 NZ_CP075116.1 Protein Homology CDS 4092397 4093560 . + 0 ID=cds-WP_000977207.1;Parent=gene-CCO40_RS19590;Dbxref=GenBank:WP_000977207.1;Name=WP_000977207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=CCO40_RS19590;product=metallo-dependent hydrolase;protein_id=WP_000977207.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4093557 4094765 . + . ID=gene-CCO40_RS19595;Name=CCO40_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19595;old_locus_tag=CCO40_19595 NZ_CP075116.1 Protein Homology CDS 4093557 4094765 . + 0 ID=cds-WP_094889046.1;Parent=gene-CCO40_RS19595;Dbxref=GenBank:WP_094889046.1;Name=WP_094889046.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463273.1;locus_tag=CCO40_RS19595;product=MFS transporter;protein_id=WP_094889046.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4094820 4095164 . - . ID=gene-CCO40_RS19600;Name=CCO40_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19600;old_locus_tag=CCO40_19600 NZ_CP075116.1 Protein Homology CDS 4094820 4095164 . - 0 ID=cds-WP_001219167.1;Parent=gene-CCO40_RS19600;Dbxref=GenBank:WP_001219167.1;Name=WP_001219167.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463272.1;locus_tag=CCO40_RS19600;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_001219167.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4095167 4098946 . - . ID=gene-CCO40_RS19605;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=CCO40_RS19605;old_locus_tag=CCO40_19605 NZ_CP075116.1 Protein Homology CDS 4095167 4098946 . - 0 ID=cds-WP_094889047.1;Parent=gene-CCO40_RS19605;Dbxref=GenBank:WP_094889047.1;Name=WP_094889047.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=CCO40_RS19605;product=autotransporter assembly complex protein TamB;protein_id=WP_094889047.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4098943 4100676 . - . ID=gene-CCO40_RS19610;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=CCO40_RS19610;old_locus_tag=CCO40_19610 NZ_CP075116.1 Protein Homology CDS 4098943 4100676 . - 0 ID=cds-WP_061379911.1;Parent=gene-CCO40_RS19610;Dbxref=GenBank:WP_061379911.1;Name=WP_061379911.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463270.1;locus_tag=CCO40_RS19610;product=autotransporter assembly complex protein TamA;protein_id=WP_061379911.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4100889 4101527 . + . ID=gene-CCO40_RS19615;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=CCO40_RS19615;old_locus_tag=CCO40_19615 NZ_CP075116.1 Protein Homology CDS 4100889 4101527 . + 0 ID=cds-WP_000051467.1;Parent=gene-CCO40_RS19615;Dbxref=GenBank:WP_000051467.1;Name=WP_000051467.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463269.1;locus_tag=CCO40_RS19615;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_000051467.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4101710 4103053 . + . ID=gene-CCO40_RS19620;Name=paeA;gbkey=Gene;gene=paeA;gene_biotype=protein_coding;gene_synonym=ytfL;locus_tag=CCO40_RS19620;old_locus_tag=CCO40_19620 NZ_CP075116.1 Protein Homology CDS 4101710 4103053 . + 0 ID=cds-WP_000934974.1;Parent=gene-CCO40_RS19620;Dbxref=GenBank:WP_000934974.1;Name=WP_000934974.1;Ontology_term=GO:0050660;gbkey=CDS;gene=paeA;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463268.1;locus_tag=CCO40_RS19620;product=polyamine export protein PaeA;protein_id=WP_000934974.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4103138 4103344 . - . ID=gene-CCO40_RS19625;Name=CCO40_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19625;old_locus_tag=CCO40_19625 NZ_CP075116.1 Protein Homology CDS 4103138 4103344 . - 0 ID=cds-WP_000689229.1;Parent=gene-CCO40_RS19625;Dbxref=GenBank:WP_000689229.1;Name=WP_000689229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=CCO40_RS19625;product=DUF1107 domain-containing protein;protein_id=WP_000689229.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4103671 4104228 . + . ID=gene-CCO40_RS19630;Name=CCO40_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19630;old_locus_tag=CCO40_19630 NZ_CP075116.1 Protein Homology CDS 4103671 4104228 . + 0 ID=cds-WP_000175301.1;Parent=gene-CCO40_RS19630;Dbxref=GenBank:WP_000175301.1;Name=WP_000175301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463266.1;locus_tag=CCO40_RS19630;product=YtfJ family protein;protein_id=WP_000175301.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4104218 4104958 . - . ID=gene-CCO40_RS19635;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=CCO40_RS19635;old_locus_tag=CCO40_19635 NZ_CP075116.1 Protein Homology CDS 4104218 4104958 . - 0 ID=cds-WP_000893398.1;Parent=gene-CCO40_RS19635;Dbxref=GenBank:WP_000893398.1;Name=WP_000893398.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=CCO40_RS19635;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000893398.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4105226 4107169 . + . ID=gene-CCO40_RS19640;Name=CCO40_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19640;old_locus_tag=CCO40_19640 NZ_CP075116.1 Protein Homology CDS 4105226 4107169 . + 0 ID=cds-WP_094889048.1;Parent=gene-CCO40_RS19640;Dbxref=GenBank:WP_094889048.1;Name=WP_094889048.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=CCO40_RS19640;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_094889048.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4107227 4107613 . - . ID=gene-CCO40_RS19645;Name=CCO40_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19645;old_locus_tag=CCO40_19645 NZ_CP075116.1 Protein Homology CDS 4107227 4107613 . - 0 ID=cds-WP_001201297.1;Parent=gene-CCO40_RS19645;Dbxref=GenBank:WP_001201297.1;Name=WP_001201297.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463263.1;locus_tag=CCO40_RS19645;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_001201297.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4107701 4108549 . + . ID=gene-CCO40_RS19650;Name=CCO40_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19650;old_locus_tag=CCO40_19650 NZ_CP075116.1 Protein Homology CDS 4107701 4108549 . + 0 ID=cds-WP_094889049.1;Parent=gene-CCO40_RS19650;Dbxref=GenBank:WP_094889049.1;Name=WP_094889049.1;Ontology_term=GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463262.1;locus_tag=CCO40_RS19650;product=SDR family oxidoreductase;protein_id=WP_094889049.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4108630 4109595 . + . ID=gene-CCO40_RS19655;Name=CCO40_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19655;old_locus_tag=CCO40_19655 NZ_CP075116.1 Protein Homology CDS 4108630 4109595 . + 0 ID=cds-WP_000623290.1;Parent=gene-CCO40_RS19655;Dbxref=GenBank:WP_000623290.1;Name=WP_000623290.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463261.1;locus_tag=CCO40_RS19655;product=DMT family transporter;protein_id=WP_000623290.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4109698 4110360 . + . ID=gene-CCO40_RS19660;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=CCO40_RS19660;old_locus_tag=CCO40_19660 NZ_CP075116.1 Protein Homology CDS 4109698 4110360 . + 0 ID=cds-WP_094889050.1;Parent=gene-CCO40_RS19660;Dbxref=GenBank:WP_094889050.1;Name=WP_094889050.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463260.1;locus_tag=CCO40_RS19660;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_094889050.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4110472 4111881 . - . ID=gene-CCO40_RS19665;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=CCO40_RS19665;old_locus_tag=CCO40_19665 NZ_CP075116.1 Protein Homology CDS 4110472 4111881 . - 0 ID=cds-WP_000228322.1;Parent=gene-CCO40_RS19665;Dbxref=GenBank:WP_000228322.1;Name=WP_000228322.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463259.1;locus_tag=CCO40_RS19665;product=D-serine/D-alanine/glycine transporter;protein_id=WP_000228322.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4112177 4112797 . - . ID=gene-CCO40_RS19670;Name=bamJ;gbkey=Gene;gene=bamJ;gene_biotype=protein_coding;locus_tag=CCO40_RS19670;old_locus_tag=CCO40_19670 NZ_CP075116.1 Protein Homology CDS 4112177 4112797 . - 0 ID=cds-WP_000235161.1;Parent=gene-CCO40_RS19670;Dbxref=GenBank:WP_000235161.1;Name=WP_000235161.1;gbkey=CDS;gene=bamJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=CCO40_RS19670;product=BamJ family beta-barrel-assembly machinery protein;protein_id=WP_000235161.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4113017 4113652 . + . ID=gene-CCO40_RS19675;Name=CCO40_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19675;old_locus_tag=CCO40_19675 NZ_CP075116.1 Protein Homology CDS 4113017 4113652 . + 0 ID=cds-WP_001119448.1;Parent=gene-CCO40_RS19675;Dbxref=GenBank:WP_001119448.1;Name=WP_001119448.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463257.1;locus_tag=CCO40_RS19675;product=OapA family protein;protein_id=WP_001119448.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4113702 4114628 . - . ID=gene-CCO40_RS19680;Name=CCO40_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19680;old_locus_tag=CCO40_19680 NZ_CP075116.1 Protein Homology CDS 4113702 4114628 . - 0 ID=cds-WP_000381068.1;Parent=gene-CCO40_RS19680;Dbxref=GenBank:WP_000381068.1;Name=WP_000381068.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=CCO40_RS19680;product=DMT family transporter;protein_id=WP_000381068.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4114776 4115225 . - . ID=gene-CCO40_RS19685;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=CCO40_RS19685;old_locus_tag=CCO40_19685 NZ_CP075116.1 Protein Homology CDS 4114776 4115225 . - 0 ID=cds-WP_001196059.1;Parent=gene-CCO40_RS19685;Dbxref=GenBank:WP_001196059.1;Name=WP_001196059.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=CCO40_RS19685;product=50S ribosomal protein L9;protein_id=WP_001196059.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4115267 4115494 . - . ID=gene-CCO40_RS19690;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=CCO40_RS19690;old_locus_tag=CCO40_19690 NZ_CP075116.1 Protein Homology CDS 4115267 4115494 . - 0 ID=cds-WP_000135199.1;Parent=gene-CCO40_RS19690;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=CCO40_RS19690;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4115499 4115813 . - . ID=gene-CCO40_RS19695;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=CCO40_RS19695;old_locus_tag=CCO40_19695 NZ_CP075116.1 Protein Homology CDS 4115499 4115813 . - 0 ID=cds-WP_001519453.1;Parent=gene-CCO40_RS19695;Dbxref=GenBank:WP_001519453.1;Name=WP_001519453.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463253.1;locus_tag=CCO40_RS19695;product=primosomal replication protein N;protein_id=WP_001519453.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4115820 4116215 . - . ID=gene-CCO40_RS19700;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=CCO40_RS19700;old_locus_tag=CCO40_19700 NZ_CP075116.1 Protein Homology CDS 4115820 4116215 . - 0 ID=cds-WP_001216673.1;Parent=gene-CCO40_RS19700;Dbxref=GenBank:WP_001216673.1;Name=WP_001216673.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=CCO40_RS19700;product=30S ribosomal protein S6;protein_id=WP_001216673.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4116602 4116877 . + . ID=gene-CCO40_RS19705;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=CCO40_RS19705;old_locus_tag=CCO40_19705 NZ_CP075116.1 Protein Homology CDS 4116602 4116877 . + 0 ID=cds-WP_094889051.1;Parent=gene-CCO40_RS19705;Dbxref=GenBank:WP_094889051.1;Name=WP_094889051.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=CCO40_RS19705;product=DUF1471 family protein YjfY;protein_id=WP_094889051.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4116930 4117487 . - . ID=gene-CCO40_RS19710;Name=CCO40_RS19710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19710;old_locus_tag=CCO40_19710 NZ_CP075116.1 Protein Homology CDS 4116930 4117487 . - 0 ID=cds-WP_000026294.1;Parent=gene-CCO40_RS19710;Dbxref=GenBank:WP_000026294.1;Name=WP_000026294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006911310.1;locus_tag=CCO40_RS19710;product=YagU family protein;protein_id=WP_000026294.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4117575 4118261 . - . ID=gene-CCO40_RS19715;Name=CCO40_RS19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19715;old_locus_tag=CCO40_19715 NZ_CP075116.1 Protein Homology CDS 4117575 4118261 . - 0 ID=cds-WP_001170768.1;Parent=gene-CCO40_RS19715;Dbxref=GenBank:WP_001170768.1;Name=WP_001170768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463249.1;locus_tag=CCO40_RS19715;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_001170768.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4118261 4119115 . - . ID=gene-CCO40_RS19720;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=CCO40_RS19720;old_locus_tag=CCO40_19720 NZ_CP075116.1 Protein Homology CDS 4118261 4119115 . - 0 ID=cds-WP_000949530.1;Parent=gene-CCO40_RS19720;Dbxref=GenBank:WP_000949530.1;Name=WP_000949530.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463248.1;locus_tag=CCO40_RS19720;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_000949530.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4119125 4119775 . - . ID=gene-CCO40_RS19725;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=CCO40_RS19725;old_locus_tag=CCO40_19725 NZ_CP075116.1 Protein Homology CDS 4119125 4119775 . - 0 ID=cds-WP_000056761.1;Parent=gene-CCO40_RS19725;Dbxref=GenBank:WP_000056761.1;Name=WP_000056761.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463247.1;locus_tag=CCO40_RS19725;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000056761.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4119789 4120253 . - . ID=gene-CCO40_RS19730;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=CCO40_RS19730;old_locus_tag=CCO40_19730 NZ_CP075116.1 Protein Homology CDS 4119789 4120253 . - 0 ID=cds-WP_000776531.1;Parent=gene-CCO40_RS19730;Dbxref=GenBank:WP_000776531.1;Name=WP_000776531.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463246.1;locus_tag=CCO40_RS19730;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776531.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4120263 4120568 . - . ID=gene-CCO40_RS19735;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=CCO40_RS19735;old_locus_tag=CCO40_19735 NZ_CP075116.1 Protein Homology CDS 4120263 4120568 . - 0 ID=cds-WP_000218358.1;Parent=gene-CCO40_RS19735;Dbxref=GenBank:WP_000218358.1;Name=WP_000218358.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463245.1;locus_tag=CCO40_RS19735;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218358.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4120584 4121981 . - . ID=gene-CCO40_RS19740;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;gene_synonym=sgaT;locus_tag=CCO40_RS19740;old_locus_tag=CCO40_19740 NZ_CP075116.1 Protein Homology CDS 4120584 4121981 . - 0 ID=cds-WP_000404873.1;Parent=gene-CCO40_RS19740;Dbxref=GenBank:WP_000404873.1;Name=WP_000404873.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=CCO40_RS19740;product=PTS ascorbate transporter subunit IIC;protein_id=WP_000404873.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4122344 4123408 . + . ID=gene-CCO40_RS19745;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=CCO40_RS19745;old_locus_tag=CCO40_19745 NZ_CP075116.1 Protein Homology CDS 4122344 4123408 . + 0 ID=cds-WP_000049161.1;Parent=gene-CCO40_RS19745;Dbxref=GenBank:WP_000049161.1;Name=WP_000049161.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=CCO40_RS19745;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_000049161.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4123513 4124268 . + . ID=gene-CCO40_RS19750;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=CCO40_RS19750;old_locus_tag=CCO40_19750 NZ_CP075116.1 Protein Homology CDS 4123513 4124268 . + 0 ID=cds-WP_000133618.1;Parent=gene-CCO40_RS19750;Dbxref=GenBank:WP_000133618.1;Name=WP_000133618.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463242.1;locus_tag=CCO40_RS19750;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133618.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4124265 4125014 . - . ID=gene-CCO40_RS19755;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=CCO40_RS19755;old_locus_tag=CCO40_19755 NZ_CP075116.1 Protein Homology CDS 4124265 4125014 . - 0 ID=cds-WP_000560306.1;Parent=gene-CCO40_RS19755;Dbxref=GenBank:WP_000560306.1;Name=WP_000560306.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463241.1;locus_tag=CCO40_RS19755;product=esterase;protein_id=WP_000560306.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4125198 4125527 . + . ID=gene-CCO40_RS19760;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=CCO40_RS19760;old_locus_tag=CCO40_19760 NZ_CP075116.1 Protein Homology CDS 4125198 4125527 . + 0 ID=cds-WP_000586836.1;Parent=gene-CCO40_RS19760;Dbxref=GenBank:WP_000586836.1;Name=WP_000586836.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=CCO40_RS19760;product=biofilm peroxide resistance protein BsmA;protein_id=WP_000586836.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4125658 4125933 . + . ID=gene-CCO40_RS19765;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=CCO40_RS19765;old_locus_tag=CCO40_19765 NZ_CP075116.1 Protein Homology CDS 4125658 4125933 . + 0 ID=cds-WP_001518964.1;Parent=gene-CCO40_RS19765;Dbxref=GenBank:WP_001518964.1;Name=WP_001518964.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134428.1;locus_tag=CCO40_RS19765;product=DUF1471 family protease activator YjfN;protein_id=WP_001518964.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4125978 4127600 . - . ID=gene-CCO40_RS19770;Name=CCO40_RS19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19770;old_locus_tag=CCO40_19770 NZ_CP075116.1 Protein Homology CDS 4125978 4127600 . - 0 ID=cds-WP_001525299.1;Parent=gene-CCO40_RS19770;Dbxref=GenBank:WP_001525299.1;Name=WP_001525299.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463238.3;locus_tag=CCO40_RS19770;product=isovaleryl-CoA dehydrogenase;protein_id=WP_001525299.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4127685 4128848 . - . ID=gene-CCO40_RS19775;Name=CCO40_RS19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19775;old_locus_tag=CCO40_19775 NZ_CP075116.1 Protein Homology CDS 4127685 4128848 . - 0 ID=cds-WP_000943942.1;Parent=gene-CCO40_RS19775;Dbxref=GenBank:WP_000943942.1;Name=WP_000943942.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463237.1;locus_tag=CCO40_RS19775;product=glutathionylspermidine synthase family protein;protein_id=WP_000943942.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4128851 4129489 . - . ID=gene-CCO40_RS19780;Name=CCO40_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19780;old_locus_tag=CCO40_19780 NZ_CP075116.1 Protein Homology CDS 4128851 4129489 . - 0 ID=cds-WP_020839669.1;Parent=gene-CCO40_RS19780;Dbxref=GenBank:WP_020839669.1;Name=WP_020839669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463236.1;locus_tag=CCO40_RS19780;product=DUF1190 domain-containing protein;protein_id=WP_020839669.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4129499 4129897 . - . ID=gene-CCO40_RS19785;Name=CCO40_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19785;old_locus_tag=CCO40_19785 NZ_CP075116.1 Protein Homology CDS 4129499 4129897 . - 0 ID=cds-WP_000547737.1;Parent=gene-CCO40_RS19785;Dbxref=GenBank:WP_000547737.1;Name=WP_000547737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463235.1;locus_tag=CCO40_RS19785;product=DUF350 domain-containing protein;protein_id=WP_000547737.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4129915 4130598 . - . ID=gene-CCO40_RS19790;Name=CCO40_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19790;old_locus_tag=CCO40_19790 NZ_CP075116.1 Protein Homology CDS 4129915 4130598 . - 0 ID=cds-WP_094889052.1;Parent=gene-CCO40_RS19790;Dbxref=GenBank:WP_094889052.1;Name=WP_094889052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463234.3;locus_tag=CCO40_RS19790;product=YjfK family protein;protein_id=WP_094889052.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 4130721 4130822 . - . ID=gene-CCO40_RS22560;Name=CCO40_RS22560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22560;partial=true;pseudo=true;start_range=.,4130721 NZ_CP075116.1 Protein Homology CDS 4130721 4130822 . - 0 ID=cds-CCO40_RS22560;Parent=gene-CCO40_RS22560;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463233.1;locus_tag=CCO40_RS22560;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4130721;transl_table=11 NZ_CP075116.1 RefSeq gene 4130822 4131520 . - . ID=gene-CCO40_RS19795;Name=CCO40_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19795;old_locus_tag=CCO40_19795 NZ_CP075116.1 Protein Homology CDS 4130822 4131520 . - 0 ID=cds-WP_094889053.1;Parent=gene-CCO40_RS19795;Dbxref=GenBank:WP_094889053.1;Name=WP_094889053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=CCO40_RS19795;product=PspA/IM30 family protein;protein_id=WP_094889053.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4131535 4131939 . - . ID=gene-CCO40_RS19800;Name=CCO40_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19800;old_locus_tag=CCO40_19800 NZ_CP075116.1 Protein Homology CDS 4131535 4131939 . - 0 ID=cds-WP_000312605.1;Parent=gene-CCO40_RS19800;Dbxref=GenBank:WP_000312605.1;Name=WP_000312605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463231.1;locus_tag=CCO40_RS19800;product=YjfI family protein;protein_id=WP_000312605.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4132071 4132802 . - . ID=gene-CCO40_RS19805;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=CCO40_RS19805;old_locus_tag=CCO40_19805 NZ_CP075116.1 Protein Homology CDS 4132071 4132802 . - 0 ID=cds-WP_001293274.1;Parent=gene-CCO40_RS19805;Dbxref=GenBank:WP_001293274.1;Name=WP_001293274.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=CCO40_RS19805;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_001293274.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4132893 4135331 . - . ID=gene-CCO40_RS19810;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=CCO40_RS19810;old_locus_tag=CCO40_19810 NZ_CP075116.1 Protein Homology CDS 4132893 4135331 . - 0 ID=cds-WP_000076354.1;Parent=gene-CCO40_RS19810;Dbxref=GenBank:WP_000076354.1;Name=WP_000076354.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463229.1;locus_tag=CCO40_RS19810;product=ribonuclease R;protein_id=WP_000076354.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4135369 4135794 . - . ID=gene-CCO40_RS19815;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=CCO40_RS19815;old_locus_tag=CCO40_19815 NZ_CP075116.1 Protein Homology CDS 4135369 4135794 . - 0 ID=cds-WP_001177632.1;Parent=gene-CCO40_RS19815;Dbxref=GenBank:WP_001177632.1;Name=WP_001177632.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=CCO40_RS19815;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177632.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4136014 4137312 . - . ID=gene-CCO40_RS19820;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=CCO40_RS19820;old_locus_tag=CCO40_19820 NZ_CP075116.1 Protein Homology CDS 4136014 4137312 . - 0 ID=cds-WP_000527976.1;Parent=gene-CCO40_RS19820;Dbxref=GenBank:WP_000527976.1;Name=WP_000527976.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=CCO40_RS19820;product=adenylosuccinate synthase;protein_id=WP_000527976.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4137415 4137612 . - . ID=gene-CCO40_RS19825;Name=CCO40_RS19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19825;old_locus_tag=CCO40_19825 NZ_CP075116.1 Protein Homology CDS 4137415 4137612 . - 0 ID=cds-WP_001089290.1;Parent=gene-CCO40_RS19825;Dbxref=GenBank:WP_001089290.1;Name=WP_001089290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463226.1;locus_tag=CCO40_RS19825;product=DUF2065 domain-containing protein;protein_id=WP_001089290.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4137691 4138695 . - . ID=gene-CCO40_RS19830;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=CCO40_RS19830;old_locus_tag=CCO40_19830 NZ_CP075116.1 Protein Homology CDS 4137691 4138695 . - 0 ID=cds-WP_001232417.1;Parent=gene-CCO40_RS19830;Dbxref=GenBank:WP_001232417.1;Name=WP_001232417.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463225.1;locus_tag=CCO40_RS19830;product=protease modulator HflC;protein_id=WP_001232417.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4138698 4139957 . - . ID=gene-CCO40_RS19835;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=CCO40_RS19835;old_locus_tag=CCO40_19835 NZ_CP075116.1 Protein Homology CDS 4138698 4139957 . - 0 ID=cds-WP_000312505.1;Parent=gene-CCO40_RS19835;Dbxref=GenBank:WP_000312505.1;Name=WP_000312505.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463224.1;locus_tag=CCO40_RS19835;product=FtsH protease activity modulator HflK;protein_id=WP_000312505.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4140172 4141452 . - . ID=gene-CCO40_RS19840;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=CCO40_RS19840;old_locus_tag=CCO40_19840 NZ_CP075116.1 Protein Homology CDS 4140172 4141452 . - 0 ID=cds-WP_000460338.1;Parent=gene-CCO40_RS19840;Dbxref=GenBank:WP_000460338.1;Name=WP_000460338.1;Ontology_term=GO:0072344,GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;go_process=rescue of stalled cytosolic ribosome|0072344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463223.1;locus_tag=CCO40_RS19840;product=ribosome rescue GTPase HflX;protein_id=WP_000460338.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4141524 4141832 . - . ID=gene-CCO40_RS19845;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=CCO40_RS19845;old_locus_tag=CCO40_19845 NZ_CP075116.1 Protein Homology CDS 4141524 4141832 . - 0 ID=cds-WP_001051875.1;Parent=gene-CCO40_RS19845;Dbxref=GenBank:WP_001051875.1;Name=WP_001051875.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463222.1;locus_tag=CCO40_RS19845;product=RNA chaperone Hfq;protein_id=WP_001051875.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4141915 4142865 . - . ID=gene-CCO40_RS19850;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=CCO40_RS19850;old_locus_tag=CCO40_19850 NZ_CP075116.1 Protein Homology CDS 4141915 4142865 . - 0 ID=cds-WP_001000734.1;Parent=gene-CCO40_RS19850;Dbxref=GenBank:WP_001000734.1;Name=WP_001000734.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=CCO40_RS19850;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001000734.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4142858 4144714 . - . ID=gene-CCO40_RS19855;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=CCO40_RS19855;old_locus_tag=CCO40_19855 NZ_CP075116.1 Protein Homology CDS 4142858 4144714 . - 0 ID=cds-WP_050068077.1;Parent=gene-CCO40_RS19855;Dbxref=GenBank:WP_050068077.1;Name=WP_050068077.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463220.1;locus_tag=CCO40_RS19855;product=DNA mismatch repair endonuclease MutL;protein_id=WP_050068077.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4144724 4146043 . - . ID=gene-CCO40_RS19860;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=CCO40_RS19860;old_locus_tag=CCO40_19860 NZ_CP075116.1 Protein Homology CDS 4144724 4146043 . - 0 ID=cds-WP_000640362.1;Parent=gene-CCO40_RS19860;Dbxref=GenBank:WP_000640362.1;Name=WP_000640362.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=CCO40_RS19860;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_000640362.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4146060 4146521 . - . ID=gene-CCO40_RS19865;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=CCO40_RS19865;old_locus_tag=CCO40_19865 NZ_CP075116.1 Protein Homology CDS 4146060 4146521 . - 0 ID=cds-WP_000981983.1;Parent=gene-CCO40_RS19865;Dbxref=GenBank:WP_000981983.1;Name=WP_000981983.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463218.1;locus_tag=CCO40_RS19865;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_000981983.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4146493 4148040 . - . ID=gene-CCO40_RS19870;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=CCO40_RS19870;old_locus_tag=CCO40_19870 NZ_CP075116.1 Protein Homology CDS 4146493 4148040 . - 0 ID=cds-WP_000968675.1;Parent=gene-CCO40_RS19870;Dbxref=GenBank:WP_000968675.1;Name=WP_000968675.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=CCO40_RS19870;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_000968675.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4148039 4149178 . + . ID=gene-CCO40_RS19875;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=CCO40_RS19875;old_locus_tag=CCO40_19875 NZ_CP075116.1 Protein Homology CDS 4148039 4149178 . + 0 ID=cds-WP_170930887.1;Parent=gene-CCO40_RS19875;Dbxref=GenBank:WP_170930887.1;Name=WP_170930887.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=CCO40_RS19875;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_170930887.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4149448 4149523 . - . ID=gene-CCO40_RS19880;Name=CCO40_RS19880;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS19880;old_locus_tag=CCO40_19880 NZ_CP075116.1 tRNAscan-SE tRNA 4149448 4149523 . - . ID=rna-CCO40_RS19880;Parent=gene-CCO40_RS19880;anticodon=(pos:complement(4149488..4149490));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS19880;product=tRNA-Gly NZ_CP075116.1 tRNAscan-SE exon 4149448 4149523 . - . ID=exon-CCO40_RS19880-1;Parent=rna-CCO40_RS19880;anticodon=(pos:complement(4149488..4149490));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS19880;product=tRNA-Gly NZ_CP075116.1 RefSeq gene 4149680 4149755 . - . ID=gene-CCO40_RS19885;Name=CCO40_RS19885;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS19885;old_locus_tag=CCO40_19885 NZ_CP075116.1 tRNAscan-SE tRNA 4149680 4149755 . - . ID=rna-CCO40_RS19885;Parent=gene-CCO40_RS19885;anticodon=(pos:complement(4149720..4149722));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS19885;product=tRNA-Gly NZ_CP075116.1 tRNAscan-SE exon 4149680 4149755 . - . ID=exon-CCO40_RS19885-1;Parent=rna-CCO40_RS19885;anticodon=(pos:complement(4149720..4149722));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS19885;product=tRNA-Gly NZ_CP075116.1 RefSeq gene 4149912 4149987 . - . ID=gene-CCO40_RS19890;Name=CCO40_RS19890;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS19890;old_locus_tag=CCO40_19890 NZ_CP075116.1 tRNAscan-SE tRNA 4149912 4149987 . - . ID=rna-CCO40_RS19890;Parent=gene-CCO40_RS19890;anticodon=(pos:complement(4149952..4149954));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS19890;product=tRNA-Gly NZ_CP075116.1 tRNAscan-SE exon 4149912 4149987 . - . ID=exon-CCO40_RS19890-1;Parent=rna-CCO40_RS19890;anticodon=(pos:complement(4149952..4149954));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS19890;product=tRNA-Gly NZ_CP075116.1 RefSeq gene 4150263 4151003 . + . ID=gene-CCO40_RS19895;Name=CCO40_RS19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19895;old_locus_tag=CCO40_19895 NZ_CP075116.1 Protein Homology CDS 4150263 4151003 . + 0 ID=cds-WP_023193358.1;Parent=gene-CCO40_RS19895;Dbxref=GenBank:WP_023193358.1;Name=WP_023193358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463215.3;locus_tag=CCO40_RS19895;product=arginine ABC transporter substrate-binding protein;protein_id=WP_023193358.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4151065 4151610 . - . ID=gene-CCO40_RS19900;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=CCO40_RS19900;old_locus_tag=CCO40_19900 NZ_CP075116.1 Protein Homology CDS 4151065 4151610 . - 0 ID=cds-WP_001271546.1;Parent=gene-CCO40_RS19900;Dbxref=GenBank:WP_001271546.1;Name=WP_001271546.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=CCO40_RS19900;product=oligoribonuclease;protein_id=WP_001271546.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4151717 4152769 . + . ID=gene-CCO40_RS19905;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=CCO40_RS19905;old_locus_tag=CCO40_19905 NZ_CP075116.1 Protein Homology CDS 4151717 4152769 . + 0 ID=cds-WP_000041945.1;Parent=gene-CCO40_RS19905;Dbxref=GenBank:WP_000041945.1;Name=WP_000041945.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=CCO40_RS19905;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_000041945.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4152861 4153829 . + . ID=gene-CCO40_RS19910;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=CCO40_RS19910;old_locus_tag=CCO40_19910 NZ_CP075116.1 Protein Homology CDS 4152861 4153829 . + 0 ID=cds-WP_000934956.1;Parent=gene-CCO40_RS19910;Dbxref=GenBank:WP_000934956.1;Name=WP_000934956.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=CCO40_RS19910;product=archaetidylserine decarboxylase;protein_id=WP_000934956.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4153848 4157174 . + . ID=gene-CCO40_RS19915;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=CCO40_RS19915;old_locus_tag=CCO40_19915 NZ_CP075116.1 Protein Homology CDS 4153848 4157174 . + 0 ID=cds-WP_001236755.1;Parent=gene-CCO40_RS19915;Dbxref=GenBank:WP_001236755.1;Name=WP_001236755.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=CCO40_RS19915;product=miniconductance mechanosensitive channel MscM;protein_id=WP_001236755.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4157311 4157631 . - . ID=gene-CCO40_RS19920;Name=CCO40_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19920;old_locus_tag=CCO40_19920 NZ_CP075116.1 Protein Homology CDS 4157311 4157631 . - 0 ID=cds-WP_001737341.1;Parent=gene-CCO40_RS19920;Dbxref=GenBank:WP_001737341.1;Name=WP_001737341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001682126.1;locus_tag=CCO40_RS19920;product=hypothetical protein;protein_id=WP_001737341.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4157696 4159198 . - . ID=gene-CCO40_RS19925;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=CCO40_RS19925;old_locus_tag=CCO40_19925 NZ_CP075116.1 Protein Homology CDS 4157696 4159198 . - 0 ID=cds-WP_000149871.1;Parent=gene-CCO40_RS19925;Dbxref=GenBank:WP_000149871.1;Name=WP_000149871.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463209.1;locus_tag=CCO40_RS19925;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_000149871.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4159424 4160401 . - . ID=gene-CCO40_RS19930;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=CCO40_RS19930;old_locus_tag=CCO40_19930 NZ_CP075116.1 Protein Homology CDS 4159424 4160401 . - 0 ID=cds-WP_000004794.1;Parent=gene-CCO40_RS19930;Dbxref=GenBank:WP_000004794.1;Name=WP_000004794.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=CCO40_RS19930;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_000004794.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4160724 4162514 . + . ID=gene-CCO40_RS19935;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=CCO40_RS19935;old_locus_tag=CCO40_19935 NZ_CP075116.1 Protein Homology CDS 4160724 4162514 . + 0 ID=cds-WP_001192954.1;Parent=gene-CCO40_RS19935;Dbxref=GenBank:WP_001192954.1;Name=WP_001192954.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463207.1;locus_tag=CCO40_RS19935;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192954.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4162507 4163241 . + . ID=gene-CCO40_RS19940;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=CCO40_RS19940;old_locus_tag=CCO40_19940 NZ_CP075116.1 Protein Homology CDS 4162507 4163241 . + 0 ID=cds-WP_000829509.1;Parent=gene-CCO40_RS19940;Dbxref=GenBank:WP_000829509.1;Name=WP_000829509.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=CCO40_RS19940;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829509.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4163252 4163647 . + . ID=gene-CCO40_RS19945;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=CCO40_RS19945;old_locus_tag=CCO40_19945 NZ_CP075116.1 Protein Homology CDS 4163252 4163647 . + 0 ID=cds-WP_000208749.1;Parent=gene-CCO40_RS19945;Dbxref=GenBank:WP_000208749.1;Name=WP_000208749.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463205.1;locus_tag=CCO40_RS19945;product=fumarate reductase subunit FrdC;protein_id=WP_000208749.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4163658 4164017 . + . ID=gene-CCO40_RS19950;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=CCO40_RS19950;old_locus_tag=CCO40_19950 NZ_CP075116.1 Protein Homology CDS 4163658 4164017 . + 0 ID=cds-WP_000609650.1;Parent=gene-CCO40_RS19950;Dbxref=GenBank:WP_000609650.1;Name=WP_000609650.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463204.1;locus_tag=CCO40_RS19950;product=fumarate reductase subunit FrdD;protein_id=WP_000609650.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4164129 4164662 . + . ID=gene-CCO40_RS19955;Name=CCO40_RS19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19955;old_locus_tag=CCO40_19955 NZ_CP075116.1 Protein Homology CDS 4164129 4164662 . + 0 ID=cds-WP_001238396.1;Parent=gene-CCO40_RS19955;Dbxref=GenBank:WP_001238396.1;Name=WP_001238396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463203.1;locus_tag=CCO40_RS19955;product=lipocalin family protein;protein_id=WP_001238396.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4164679 4164996 . - . ID=gene-CCO40_RS19960;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=CCO40_RS19960;old_locus_tag=CCO40_19960 NZ_CP075116.1 Protein Homology CDS 4164679 4164996 . - 0 ID=cds-WP_000118469.1;Parent=gene-CCO40_RS19960;Dbxref=GenBank:WP_000118469.1;Name=WP_000118469.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463202.1;locus_tag=CCO40_RS19960;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118469.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4165253 4165840 . + . ID=gene-CCO40_RS19965;Name=CCO40_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19965;old_locus_tag=CCO40_19965 NZ_CP075116.1 Protein Homology CDS 4165253 4165840 . + 0 ID=cds-WP_000912959.1;Parent=gene-CCO40_RS19965;Dbxref=GenBank:WP_000912959.1;Name=WP_000912959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463201.1;locus_tag=CCO40_RS19965;product=helix-turn-helix transcriptional regulator;protein_id=WP_000912959.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4165871 4166017 . - . ID=gene-CCO40_RS19970;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=CCO40_RS19970;old_locus_tag=CCO40_19970 NZ_CP075116.1 Protein Homology CDS 4165871 4166017 . - 0 ID=cds-WP_000239598.1;Parent=gene-CCO40_RS19970;Dbxref=GenBank:WP_000239598.1;Name=WP_000239598.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463200.1;locus_tag=CCO40_RS19970;product=lipoprotein toxin entericidin B;protein_id=WP_000239598.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4166125 4166259 . - . ID=gene-CCO40_RS19975;Name=CCO40_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19975;old_locus_tag=CCO40_19975 NZ_CP075116.1 Protein Homology CDS 4166125 4166259 . - 0 ID=cds-WP_000977686.1;Parent=gene-CCO40_RS19975;Dbxref=GenBank:WP_000977686.1;Name=WP_000977686.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=CCO40_RS19975;product=entericidin A/B family lipoprotein;protein_id=WP_000977686.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4166320 4166886 . - . ID=gene-CCO40_RS19980;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=CCO40_RS19980;old_locus_tag=CCO40_19980 NZ_CP075116.1 Protein Homology CDS 4166320 4166886 . - 0 ID=cds-WP_000257282.1;Parent=gene-CCO40_RS19980;Dbxref=GenBank:WP_000257282.1;Name=WP_000257282.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=CCO40_RS19980;product=elongation factor P;protein_id=WP_000257282.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4166927 4167955 . + . ID=gene-CCO40_RS19985;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=CCO40_RS19985;old_locus_tag=CCO40_19985 NZ_CP075116.1 Protein Homology CDS 4166927 4167955 . + 0 ID=cds-WP_000940484.1;Parent=gene-CCO40_RS19985;Dbxref=GenBank:WP_000940484.1;Name=WP_000940484.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463197.1;locus_tag=CCO40_RS19985;product=EF-P beta-lysylation protein EpmB;protein_id=WP_000940484.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4168237 4169094 . + . ID=gene-CCO40_RS19990;Name=CCO40_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19990;old_locus_tag=CCO40_19990 NZ_CP075116.1 Protein Homology CDS 4168237 4169094 . + 0 ID=cds-WP_001229227.1;Parent=gene-CCO40_RS19990;Dbxref=GenBank:WP_001229227.1;Name=WP_001229227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463196.1;locus_tag=CCO40_RS19990;product=YjeJ family protein;protein_id=WP_001229227.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4169142 4169495 . - . ID=gene-CCO40_RS19995;Name=CCO40_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS19995;old_locus_tag=CCO40_19995 NZ_CP075116.1 Protein Homology CDS 4169142 4169495 . - 0 ID=cds-WP_000558210.1;Parent=gene-CCO40_RS19995;Dbxref=GenBank:WP_000558210.1;Name=WP_000558210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=CCO40_RS19995;product=DUF4156 domain-containing protein;protein_id=WP_000558210.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4169730 4171376 . - . ID=gene-CCO40_RS20000;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=CCO40_RS20000;old_locus_tag=CCO40_20000 NZ_CP075116.1 Protein Homology CDS 4169730 4171376 . - 0 ID=cds-WP_000729126.1;Parent=gene-CCO40_RS20000;Dbxref=GenBank:WP_000729126.1;Name=WP_000729126.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=CCO40_RS20000;product=chaperonin GroEL;protein_id=WP_000729126.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4171420 4171713 . - . ID=gene-CCO40_RS20005;Name=CCO40_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20005;old_locus_tag=CCO40_20005 NZ_CP075116.1 Protein Homology CDS 4171420 4171713 . - 0 ID=cds-WP_000027827.1;Parent=gene-CCO40_RS20005;Dbxref=GenBank:WP_000027827.1;Name=WP_000027827.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=CCO40_RS20005;product=co-chaperone GroES;protein_id=WP_000027827.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4171989 4173230 . + . ID=gene-CCO40_RS20010;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=CCO40_RS20010;old_locus_tag=CCO40_20010 NZ_CP075116.1 Protein Homology CDS 4171989 4173230 . + 0 ID=cds-WP_023196598.1;Parent=gene-CCO40_RS20010;Dbxref=GenBank:WP_023196598.1;Name=WP_023196598.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463192.1;locus_tag=CCO40_RS20010;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_023196598.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4173289 4173765 . - . ID=gene-CCO40_RS20015;Name=CCO40_RS20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20015;old_locus_tag=CCO40_20015 NZ_CP075116.1 Protein Homology CDS 4173289 4173765 . - 0 ID=cds-WP_001267291.1;Parent=gene-CCO40_RS20015;Dbxref=GenBank:WP_001267291.1;Name=WP_001267291.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313148.1;locus_tag=CCO40_RS20015;product=FxsA family protein;protein_id=WP_001267291.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4174106 4175542 . + . ID=gene-CCO40_RS20020;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=CCO40_RS20020;old_locus_tag=CCO40_20020 NZ_CP075116.1 Protein Homology CDS 4174106 4175542 . + 0 ID=cds-WP_000069440.1;Parent=gene-CCO40_RS20020;Dbxref=GenBank:WP_000069440.1;Name=WP_000069440.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463190.1;locus_tag=CCO40_RS20020;product=aspartate ammonia-lyase;protein_id=WP_000069440.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4175657 4176958 . + . ID=gene-CCO40_RS20025;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=CCO40_RS20025;old_locus_tag=CCO40_20025 NZ_CP075116.1 Protein Homology CDS 4175657 4176958 . + 0 ID=cds-WP_000637595.1;Parent=gene-CCO40_RS20025;Dbxref=GenBank:WP_000637595.1;Name=WP_000637595.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=CCO40_RS20025;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000637595.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4177079 4177426 . + . ID=gene-CCO40_RS20030;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=CCO40_RS20030;old_locus_tag=CCO40_20030 NZ_CP075116.1 Protein Homology CDS 4177079 4177426 . + 0 ID=cds-WP_000887832.1;Parent=gene-CCO40_RS20030;Dbxref=GenBank:WP_000887832.1;Name=WP_000887832.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463188.1;locus_tag=CCO40_RS20030;product=divalent cation tolerance protein CutA;protein_id=WP_000887832.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4177402 4179105 . + . ID=gene-CCO40_RS20035;Name=CCO40_RS20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20035;old_locus_tag=CCO40_20035 NZ_CP075116.1 Protein Homology CDS 4177402 4179105 . + 0 ID=cds-WP_000068882.1;Parent=gene-CCO40_RS20035;Dbxref=GenBank:WP_000068882.1;Name=WP_000068882.1;Ontology_term=GO:0017004,GO:0009055,GO:0030554,GO:0047134;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,adenyl nucleotide binding|0030554||IEA,protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=CCO40_RS20035;product=protein-disulfide reductase DsbD;protein_id=WP_000068882.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4179142 4179717 . + . ID=gene-CCO40_RS20040;Name=CCO40_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20040;old_locus_tag=CCO40_20040 NZ_CP075116.1 Protein Homology CDS 4179142 4179717 . + 0 ID=cds-WP_001188508.1;Parent=gene-CCO40_RS20040;Dbxref=GenBank:WP_001188508.1;Name=WP_001188508.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463186.1;locus_tag=CCO40_RS20040;product=transcriptional regulator;protein_id=WP_001188508.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4179833 4179908 . + . ID=gene-CCO40_RS20045;Name=CCO40_RS20045;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS20045;old_locus_tag=CCO40_20045 NZ_CP075116.1 tRNAscan-SE tRNA 4179833 4179908 . + . ID=rna-CCO40_RS20045;Parent=gene-CCO40_RS20045;anticodon=(pos:4179866..4179868);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS20045;product=tRNA-Phe NZ_CP075116.1 tRNAscan-SE exon 4179833 4179908 . + . ID=exon-CCO40_RS20045-1;Parent=rna-CCO40_RS20045;anticodon=(pos:4179866..4179868);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS20045;product=tRNA-Phe NZ_CP075116.1 RefSeq pseudogene 4179988 4180062 . - . ID=gene-CCO40_RS20050;Name=CCO40_RS20050;end_range=4180062,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS20050;old_locus_tag=CCO40_20050;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 4179988 4180062 . - 0 ID=cds-CCO40_RS20050;Parent=gene-CCO40_RS20050;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4180062,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003842122.1;locus_tag=CCO40_RS20050;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 4180619 4181371 . + . ID=gene-CCO40_RS20060;Name=CCO40_RS20060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20060;old_locus_tag=CCO40_20060 NZ_CP075116.1 Protein Homology CDS 4180619 4181371 . + 0 ID=cds-WP_000842428.1;Parent=gene-CCO40_RS20060;Dbxref=GenBank:WP_000842428.1;Name=WP_000842428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463184.1;locus_tag=CCO40_RS20060;product=non-specific acid phosphatase;protein_id=WP_000842428.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 4181514 4182559 . + . ID=gene-CCO40_RS20065;Name=CCO40_RS20065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS20065;old_locus_tag=CCO40_20065;pseudo=true NZ_CP075116.1 Protein Homology CDS 4181514 4182559 . + 0 ID=cds-CCO40_RS20065;Parent=gene-CCO40_RS20065;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=CCO40_RS20065;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 4182648 4183649 . - . ID=gene-CCO40_RS20070;Name=CCO40_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20070;old_locus_tag=CCO40_20070 NZ_CP075116.1 Protein Homology CDS 4182648 4183649 . - 0 ID=cds-WP_000676522.1;Parent=gene-CCO40_RS20070;Dbxref=GenBank:WP_000676522.1;Name=WP_000676522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000676522.1;locus_tag=CCO40_RS20070;product=DUF1202 family protein;protein_id=WP_000676522.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 4183987 4184869 . - . ID=gene-CCO40_RS20075;Name=CCO40_RS20075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS20075;old_locus_tag=CCO40_20075;pseudo=true NZ_CP075116.1 Protein Homology CDS 4183987 4184869 . - 0 ID=cds-CCO40_RS20075;Parent=gene-CCO40_RS20075;Note=frameshifted%3B internal stop;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=CCO40_RS20075;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 4184986 4185207 . + . ID=gene-CCO40_RS20080;Name=CCO40_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20080;old_locus_tag=CCO40_20080 NZ_CP075116.1 Protein Homology CDS 4184986 4185207 . + 0 ID=cds-WP_021001044.1;Parent=gene-CCO40_RS20080;Dbxref=GenBank:WP_021001044.1;Name=WP_021001044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463181.1;locus_tag=CCO40_RS20080;product=hypothetical protein;protein_id=WP_021001044.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4185473 4186348 . + . ID=gene-CCO40_RS20085;Name=CCO40_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20085;old_locus_tag=CCO40_20085 NZ_CP075116.1 Protein Homology CDS 4185473 4186348 . + 0 ID=cds-WP_000921676.1;Parent=gene-CCO40_RS20085;Dbxref=GenBank:WP_000921676.1;Name=WP_000921676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463180.1;locus_tag=CCO40_RS20085;product=AraC family transcriptional regulator;protein_id=WP_000921676.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4186345 4186632 . + . ID=gene-CCO40_RS20090;Name=rtsB;gbkey=Gene;gene=rtsB;gene_biotype=protein_coding;locus_tag=CCO40_RS20090;old_locus_tag=CCO40_20090 NZ_CP075116.1 Protein Homology CDS 4186345 4186632 . + 0 ID=cds-WP_001269916.1;Parent=gene-CCO40_RS20090;Dbxref=GenBank:WP_001269916.1;Name=WP_001269916.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rtsB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463179.3;locus_tag=CCO40_RS20090;product=transcriptional regulator RtsB;protein_id=WP_001269916.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4186625 4186807 . - . ID=gene-CCO40_RS22565;Name=CCO40_RS22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22565 NZ_CP075116.1 Protein Homology CDS 4186625 4186807 . - 0 ID=cds-WP_001527266.1;Parent=gene-CCO40_RS22565;Dbxref=GenBank:WP_001527266.1;Name=WP_001527266.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=CCO40_RS22565;product=ATP-binding cassette domain-containing protein;protein_id=WP_001527266.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 4186827 4186926 . + . ID=gene-CCO40_RS22570;Name=CCO40_RS22570;end_range=4186926,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22570;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 4186827 4186926 . + 0 ID=cds-CCO40_RS22570;Parent=gene-CCO40_RS22570;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4186926,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463178.1;locus_tag=CCO40_RS22570;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 4187042 4187173 . + . ID=gene-CCO40_RS22575;Name=CCO40_RS22575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22575;partial=true;pseudo=true;start_range=.,4187042 NZ_CP075116.1 Protein Homology CDS 4187042 4187173 . + 0 ID=cds-CCO40_RS22575;Parent=gene-CCO40_RS22575;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=CCO40_RS22575;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4187042;transl_table=11 NZ_CP075116.1 RefSeq gene 4187468 4188373 . - . ID=gene-CCO40_RS20100;Name=CCO40_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20100;old_locus_tag=CCO40_20100 NZ_CP075116.1 Protein Homology CDS 4187468 4188373 . - 0 ID=cds-WP_001268202.1;Parent=gene-CCO40_RS20100;Dbxref=GenBank:WP_001268202.1;Name=WP_001268202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463175.1;locus_tag=CCO40_RS20100;product=SdiA-regulated domain-containing protein;protein_id=WP_001268202.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4188678 4190078 . + . ID=gene-CCO40_RS20105;Name=CCO40_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20105;old_locus_tag=CCO40_20105 NZ_CP075116.1 Protein Homology CDS 4188678 4190078 . + 0 ID=cds-WP_021293938.1;Parent=gene-CCO40_RS20105;Dbxref=GenBank:WP_021293938.1;Name=WP_021293938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=CCO40_RS20105;product=CBM96 family carbohydrate-binding protein;protein_id=WP_021293938.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4190162 4190755 . - . ID=gene-CCO40_RS20110;Name=CCO40_RS20110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20110;old_locus_tag=CCO40_20110 NZ_CP075116.1 Protein Homology CDS 4190162 4190755 . - 0 ID=cds-WP_001682478.1;Parent=gene-CCO40_RS20110;Dbxref=GenBank:WP_001682478.1;Name=WP_001682478.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001629474.1;locus_tag=CCO40_RS20110;product=TorD/DmsD family molecular chaperone;protein_id=WP_001682478.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4190831 4191604 . - . ID=gene-CCO40_RS20115;Name=CCO40_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20115;old_locus_tag=CCO40_20115 NZ_CP075116.1 Protein Homology CDS 4190831 4191604 . - 0 ID=cds-WP_000544916.1;Parent=gene-CCO40_RS20115;Dbxref=GenBank:WP_000544916.1;Name=WP_000544916.1;Ontology_term=GO:0019645,GO:0009389,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=CCO40_RS20115;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_000544916.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4191597 4192223 . - . ID=gene-CCO40_RS20120;Name=CCO40_RS20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20120;old_locus_tag=CCO40_20120 NZ_CP075116.1 Protein Homology CDS 4191597 4192223 . - 0 ID=cds-WP_000816143.1;Parent=gene-CCO40_RS20120;Dbxref=GenBank:WP_000816143.1;Name=WP_000816143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=CCO40_RS20120;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_000816143.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4192237 4194666 . - . ID=gene-CCO40_RS20125;Name=CCO40_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20125;old_locus_tag=CCO40_20125 NZ_CP075116.1 Protein Homology CDS 4192237 4194666 . - 0 ID=cds-WP_000403482.1;Parent=gene-CCO40_RS20125;Dbxref=GenBank:WP_000403482.1;Name=WP_000403482.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403483.1;locus_tag=CCO40_RS20125;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_000403482.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4195022 4196653 . + . ID=gene-CCO40_RS20130;Name=CCO40_RS20130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20130;old_locus_tag=CCO40_20130 NZ_CP075116.1 Protein Homology CDS 4195022 4196653 . + 0 ID=cds-WP_000682892.1;Parent=gene-CCO40_RS20130;Dbxref=GenBank:WP_000682892.1;Name=WP_000682892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463169.1;locus_tag=CCO40_RS20130;product=sensor histidine kinase;protein_id=WP_000682892.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4196650 4197369 . + . ID=gene-CCO40_RS20135;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=CCO40_RS20135;old_locus_tag=CCO40_20135 NZ_CP075116.1 Protein Homology CDS 4196650 4197369 . + 0 ID=cds-WP_000611307.1;Parent=gene-CCO40_RS20135;Dbxref=GenBank:WP_000611307.1;Name=WP_000611307.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463168.1;locus_tag=CCO40_RS20135;product=two-component system response regulator DcuR;protein_id=WP_000611307.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4197686 4197952 . + . ID=gene-CCO40_RS20140;Name=CCO40_RS20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20140;old_locus_tag=CCO40_20140 NZ_CP075116.1 Protein Homology CDS 4197686 4197952 . + 0 ID=cds-WP_010989095.1;Parent=gene-CCO40_RS20140;Dbxref=GenBank:WP_010989095.1;Name=WP_010989095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=CCO40_RS20140;product=hypothetical protein;protein_id=WP_010989095.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4198099 4199439 . + . ID=gene-CCO40_RS20145;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=CCO40_RS20145;old_locus_tag=CCO40_20145 NZ_CP075116.1 Protein Homology CDS 4198099 4199439 . + 0 ID=cds-WP_094889054.1;Parent=gene-CCO40_RS20145;Dbxref=GenBank:WP_094889054.1;Name=WP_094889054.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463166.1;locus_tag=CCO40_RS20145;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_094889054.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4199535 4201181 . + . ID=gene-CCO40_RS20150;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=CCO40_RS20150;old_locus_tag=CCO40_20150 NZ_CP075116.1 Protein Homology CDS 4199535 4201181 . + 0 ID=cds-WP_000037203.1;Parent=gene-CCO40_RS20150;Dbxref=GenBank:WP_000037203.1;Name=WP_000037203.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463165.1;locus_tag=CCO40_RS20150;product=class I fumarate hydratase FumA;protein_id=WP_000037203.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4201279 4202709 . - . ID=gene-CCO40_RS20155;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=CCO40_RS20155;old_locus_tag=CCO40_20155 NZ_CP075116.1 Protein Homology CDS 4201279 4202709 . - 0 ID=cds-WP_000028070.1;Parent=gene-CCO40_RS20155;Dbxref=GenBank:WP_000028070.1;Name=WP_000028070.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463164.1;locus_tag=CCO40_RS20155;product=melibiose:sodium transporter MelB;protein_id=WP_000028070.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4202772 4204127 . - . ID=gene-CCO40_RS20160;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=CCO40_RS20160;old_locus_tag=CCO40_20160 NZ_CP075116.1 Protein Homology CDS 4202772 4204127 . - 0 ID=cds-WP_001531971.1;Parent=gene-CCO40_RS20160;Dbxref=GenBank:WP_001531971.1;Name=WP_001531971.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=CCO40_RS20160;product=alpha-galactosidase;protein_id=WP_001531971.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4204396 4205328 . + . ID=gene-CCO40_RS20165;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=CCO40_RS20165;old_locus_tag=CCO40_20165 NZ_CP075116.1 Protein Homology CDS 4204396 4205328 . + 0 ID=cds-WP_000106992.1;Parent=gene-CCO40_RS20165;Dbxref=GenBank:WP_000106992.1;Name=WP_000106992.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463162.1;locus_tag=CCO40_RS20165;product=transcriptional regulator MelR;protein_id=WP_000106992.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4205561 4207828 . + . ID=gene-CCO40_RS20170;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=CCO40_RS20170;old_locus_tag=CCO40_20170 NZ_CP075116.1 Protein Homology CDS 4205561 4207828 . + 0 ID=cds-WP_094889060.1;Parent=gene-CCO40_RS20170;Dbxref=GenBank:WP_094889060.1;Name=WP_094889060.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709824.2;locus_tag=CCO40_RS20170;product=arginine decarboxylase;protein_id=WP_094889060.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4208126 4208887 . + . ID=gene-CCO40_RS20175;Name=CCO40_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20175;old_locus_tag=CCO40_20175 NZ_CP075116.1 Protein Homology CDS 4208126 4208887 . + 0 ID=cds-WP_001217074.1;Parent=gene-CCO40_RS20175;Dbxref=GenBank:WP_001217074.1;Name=WP_001217074.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463160.1;locus_tag=CCO40_RS20175;product=AraC family transcriptional regulator;protein_id=WP_001217074.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4209027 4210364 . + . ID=gene-CCO40_RS20180;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=CCO40_RS20180;old_locus_tag=CCO40_20180 NZ_CP075116.1 Protein Homology CDS 4209027 4210364 . + 0 ID=cds-WP_000093130.1;Parent=gene-CCO40_RS20180;Dbxref=GenBank:WP_000093130.1;Name=WP_000093130.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463159.1;locus_tag=CCO40_RS20180;product=arginine/agmatine antiporter;protein_id=WP_000093130.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4210498 4212141 . + . ID=gene-CCO40_RS20185;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=CCO40_RS20185;old_locus_tag=CCO40_20185 NZ_CP075116.1 Protein Homology CDS 4210498 4212141 . + 0 ID=cds-WP_000919290.1;Parent=gene-CCO40_RS20185;Dbxref=GenBank:WP_000919290.1;Name=WP_000919290.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463158.1;locus_tag=CCO40_RS20185;product=phosphoethanolamine transferase EptA;protein_id=WP_000919290.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4212138 4212806 . + . ID=gene-CCO40_RS20190;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=CCO40_RS20190;old_locus_tag=CCO40_20190 NZ_CP075116.1 Protein Homology CDS 4212138 4212806 . + 0 ID=cds-WP_000697899.1;Parent=gene-CCO40_RS20190;Dbxref=GenBank:WP_000697899.1;Name=WP_000697899.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463157.1;locus_tag=CCO40_RS20190;product=two-component system response regulator PmrA;protein_id=WP_000697899.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4212816 4213886 . + . ID=gene-CCO40_RS20195;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=CCO40_RS20195;old_locus_tag=CCO40_20195 NZ_CP075116.1 Protein Homology CDS 4212816 4213886 . + 0 ID=cds-WP_001212189.1;Parent=gene-CCO40_RS20195;Dbxref=GenBank:WP_001212189.1;Name=WP_001212189.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=CCO40_RS20195;product=two-component system sensor histidine kinase PmrB;protein_id=WP_001212189.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4213894 4213983 . - . ID=gene-CCO40_RS20200;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=CCO40_RS20200;old_locus_tag=CCO40_20200 NZ_CP075116.1 Protein Homology CDS 4213894 4213983 . - 0 ID=cds-WP_000844399.1;Parent=gene-CCO40_RS20200;Dbxref=GenBank:WP_000844399.1;Name=WP_000844399.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=CCO40_RS20200;product=LpxT activity modulator PmrR;protein_id=WP_000844399.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4214053 4215555 . - . ID=gene-CCO40_RS20205;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=CCO40_RS20205;old_locus_tag=CCO40_20205 NZ_CP075116.1 Protein Homology CDS 4214053 4215555 . - 0 ID=cds-WP_000919710.1;Parent=gene-CCO40_RS20205;Dbxref=GenBank:WP_000919710.1;Name=WP_000919710.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=CCO40_RS20205;product=glycine betaine/L-proline transporter ProP;protein_id=WP_000919710.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4216023 4216358 . + . ID=gene-CCO40_RS20210;Name=CCO40_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20210;old_locus_tag=CCO40_20210 NZ_CP075116.1 Protein Homology CDS 4216023 4216358 . + 0 ID=cds-WP_000056482.1;Parent=gene-CCO40_RS20210;Dbxref=GenBank:WP_000056482.1;Name=WP_000056482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463154.1;locus_tag=CCO40_RS20210;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_000056482.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4216478 4216921 . + . ID=gene-CCO40_RS20215;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=CCO40_RS20215;old_locus_tag=CCO40_20215 NZ_CP075116.1 Protein Homology CDS 4216478 4216921 . + 0 ID=cds-WP_001131301.1;Parent=gene-CCO40_RS20215;Dbxref=GenBank:WP_001131301.1;Name=WP_001131301.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463153.1;locus_tag=CCO40_RS20215;product=VOC family metalloprotein YjdN;protein_id=WP_001131301.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4217073 4217507 . + . ID=gene-CCO40_RS20220;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=CCO40_RS20220;old_locus_tag=CCO40_20220 NZ_CP075116.1 Protein Homology CDS 4217073 4217507 . + 0 ID=cds-WP_001526214.1;Parent=gene-CCO40_RS20220;Dbxref=GenBank:WP_001526214.1;Name=WP_001526214.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=CCO40_RS20220;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_001526214.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4217765 4218673 . + . ID=gene-CCO40_RS20225;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=CCO40_RS20225;old_locus_tag=CCO40_20225 NZ_CP075116.1 Protein Homology CDS 4217765 4218673 . + 0 ID=cds-WP_000457029.1;Parent=gene-CCO40_RS20225;Dbxref=GenBank:WP_000457029.1;Name=WP_000457029.1;gbkey=CDS;gene=lpxO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463151.1;locus_tag=CCO40_RS20225;product=lipid A hydroxylase LpxO;protein_id=WP_000457029.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4219028 4221175 . + . ID=gene-CCO40_RS20230;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=CCO40_RS20230;old_locus_tag=CCO40_20230 NZ_CP075116.1 Protein Homology CDS 4219028 4221175 . + 0 ID=cds-WP_077906127.1;Parent=gene-CCO40_RS20230;Dbxref=GenBank:WP_077906127.1;Name=WP_077906127.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=CCO40_RS20230;product=formate dehydrogenase subunit alpha;protein_id=WP_077906127.1;transl_except=(pos:4219445..4219447%2Caa:Sec);transl_table=11 NZ_CP075116.1 RefSeq gene 4221352 4222041 . + . ID=gene-CCO40_RS20235;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=CCO40_RS20235;old_locus_tag=CCO40_20235 NZ_CP075116.1 Protein Homology CDS 4221352 4222041 . + 0 ID=cds-WP_000771454.1;Parent=gene-CCO40_RS20235;Dbxref=GenBank:WP_000771454.1;Name=WP_000771454.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463149.1;locus_tag=CCO40_RS20235;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_000771454.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4222199 4223509 . - . ID=gene-CCO40_RS20240;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=CCO40_RS20240;old_locus_tag=CCO40_20240 NZ_CP075116.1 Protein Homology CDS 4222199 4223509 . - 0 ID=cds-WP_000793278.1;Parent=gene-CCO40_RS20240;Dbxref=GenBank:WP_000793278.1;Name=WP_000793278.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463148.1;locus_tag=CCO40_RS20240;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_000793278.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4223854 4224474 . - . ID=gene-CCO40_RS20245;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=CCO40_RS20245;old_locus_tag=CCO40_20245 NZ_CP075116.1 Protein Homology CDS 4223854 4224474 . - 0 ID=cds-WP_000083235.1;Parent=gene-CCO40_RS20245;Dbxref=GenBank:WP_000083235.1;Name=WP_000083235.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=CCO40_RS20245;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_000083235.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 4224471 4226709 . - . ID=gene-CCO40_RS20255;Name=nrfF;gbkey=Gene;gene=nrfF;gene_biotype=pseudogene;locus_tag=CCO40_RS20255;old_locus_tag=CCO40_20255;pseudo=true NZ_CP075116.1 Protein Homology CDS 4224471 4226709 . - 0 ID=cds-CCO40_RS20255;Parent=gene-CCO40_RS20255;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nrfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO40_RS20255;product=heme lyase NrfEFG subunit NrfF;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 4226702 4227658 . - . ID=gene-CCO40_RS20260;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=CCO40_RS20260;old_locus_tag=CCO40_20260 NZ_CP075116.1 Protein Homology CDS 4226702 4227658 . - 0 ID=cds-WP_000199634.1;Parent=gene-CCO40_RS20260;Dbxref=GenBank:WP_000199634.1;Name=WP_000199634.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=CCO40_RS20260;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_000199634.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4227655 4228326 . - . ID=gene-CCO40_RS20265;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=CCO40_RS20265;old_locus_tag=CCO40_20265 NZ_CP075116.1 Protein Homology CDS 4227655 4228326 . - 0 ID=cds-WP_001278018.1;Parent=gene-CCO40_RS20265;Dbxref=GenBank:WP_001278018.1;Name=WP_001278018.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463144.1;locus_tag=CCO40_RS20265;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_001278018.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4228323 4228889 . - . ID=gene-CCO40_RS20270;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=CCO40_RS20270;old_locus_tag=CCO40_20270 NZ_CP075116.1 Protein Homology CDS 4228323 4228889 . - 0 ID=cds-WP_000115065.1;Parent=gene-CCO40_RS20270;Dbxref=GenBank:WP_000115065.1;Name=WP_000115065.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=CCO40_RS20270;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_000115065.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4229001 4230437 . - . ID=gene-CCO40_RS20275;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=CCO40_RS20275;old_locus_tag=CCO40_20275 NZ_CP075116.1 Protein Homology CDS 4229001 4230437 . - 0 ID=cds-WP_000101770.1;Parent=gene-CCO40_RS20275;Dbxref=GenBank:WP_000101770.1;Name=WP_000101770.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463142.1;locus_tag=CCO40_RS20275;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_000101770.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4230869 4232827 . + . ID=gene-CCO40_RS20280;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=CCO40_RS20280;old_locus_tag=CCO40_20280 NZ_CP075116.1 Protein Homology CDS 4230869 4232827 . + 0 ID=cds-WP_000083877.1;Parent=gene-CCO40_RS20280;Dbxref=GenBank:WP_000083877.1;Name=WP_000083877.1;Ontology_term=GO:0006085,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetyl-CoA synthetase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process|0006085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463140.1;locus_tag=CCO40_RS20280;product=acetate--CoA ligase;protein_id=WP_000083877.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4233065 4233379 . + . ID=gene-CCO40_RS20285;Name=CCO40_RS20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20285;old_locus_tag=CCO40_20285 NZ_CP075116.1 Protein Homology CDS 4233065 4233379 . + 0 ID=cds-WP_000999620.1;Parent=gene-CCO40_RS20285;Dbxref=GenBank:WP_000999620.1;Name=WP_000999620.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463139.1;locus_tag=CCO40_RS20285;product=DUF485 domain-containing protein;protein_id=WP_000999620.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4233376 4235025 . + . ID=gene-CCO40_RS20290;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=CCO40_RS20290;old_locus_tag=CCO40_20290 NZ_CP075116.1 Protein Homology CDS 4233376 4235025 . + 0 ID=cds-WP_000832536.1;Parent=gene-CCO40_RS20290;Dbxref=GenBank:WP_000832536.1;Name=WP_000832536.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=CCO40_RS20290;product=cation/acetate symporter ActP;protein_id=WP_000832536.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4235064 4235753 . - . ID=gene-CCO40_RS20295;Name=CCO40_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20295;old_locus_tag=CCO40_20295 NZ_CP075116.1 Protein Homology CDS 4235064 4235753 . - 0 ID=cds-WP_001067096.1;Parent=gene-CCO40_RS20295;Dbxref=GenBank:WP_001067096.1;Name=WP_001067096.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=CCO40_RS20295;product=LrgB family protein;protein_id=WP_001067096.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4235746 4236156 . - . ID=gene-CCO40_RS20300;Name=CCO40_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20300;old_locus_tag=CCO40_20300 NZ_CP075116.1 Protein Homology CDS 4235746 4236156 . - 0 ID=cds-WP_024133366.1;Parent=gene-CCO40_RS20300;Dbxref=GenBank:WP_024133366.1;Name=WP_024133366.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463136.1;locus_tag=CCO40_RS20300;product=CidA/LrgA family protein;protein_id=WP_024133366.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4236260 4237147 . + . ID=gene-CCO40_RS20305;Name=CCO40_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20305;old_locus_tag=CCO40_20305 NZ_CP075116.1 Protein Homology CDS 4236260 4237147 . + 0 ID=cds-WP_000354962.1;Parent=gene-CCO40_RS20305;Dbxref=GenBank:WP_000354962.1;Name=WP_000354962.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463135.1;locus_tag=CCO40_RS20305;product=LysR family transcriptional regulator;protein_id=WP_000354962.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4237242 4238888 . - . ID=gene-CCO40_RS20310;Name=CCO40_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20310;old_locus_tag=CCO40_20310 NZ_CP075116.1 Protein Homology CDS 4237242 4238888 . - 0 ID=cds-WP_001536604.1;Parent=gene-CCO40_RS20310;Dbxref=GenBank:WP_001536604.1;Name=WP_001536604.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=CCO40_RS20310;product=Na+/H+ antiporter;protein_id=WP_001536604.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4239038 4240387 . - . ID=gene-CCO40_RS20315;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=CCO40_RS20315;old_locus_tag=CCO40_20315 NZ_CP075116.1 Protein Homology CDS 4239038 4240387 . - 0 ID=cds-WP_000106907.1;Parent=gene-CCO40_RS20315;Dbxref=GenBank:WP_000106907.1;Name=WP_000106907.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=CCO40_RS20315;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_000106907.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4240734 4241402 . - . ID=gene-CCO40_RS20320;Name=CCO40_RS20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20320;old_locus_tag=CCO40_20320 NZ_CP075116.1 Protein Homology CDS 4240734 4241402 . - 0 ID=cds-WP_000958575.1;Parent=gene-CCO40_RS20320;Dbxref=GenBank:WP_000958575.1;Name=WP_000958575.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463132.1;locus_tag=CCO40_RS20320;product=glutathione S-transferase family protein;protein_id=WP_000958575.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4241695 4242153 . - . ID=gene-CCO40_RS20325;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=CCO40_RS20325;old_locus_tag=CCO40_20325 NZ_CP075116.1 Protein Homology CDS 4241695 4242153 . - 0 ID=cds-WP_000412686.1;Parent=gene-CCO40_RS20325;Dbxref=GenBank:WP_000412686.1;Name=WP_000412686.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463131.1;locus_tag=CCO40_RS20325;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412686.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4242240 4242563 . + . ID=gene-CCO40_RS20330;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=CCO40_RS20330;old_locus_tag=CCO40_20330 NZ_CP075116.1 Protein Homology CDS 4242240 4242563 . + 0 ID=cds-WP_000019483.1;Parent=gene-CCO40_RS20330;Dbxref=GenBank:WP_000019483.1;Name=WP_000019483.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463130.1;locus_tag=CCO40_RS20330;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019483.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4242551 4244152 . - . ID=gene-CCO40_RS20335;Name=pdeC;gbkey=Gene;gene=pdeC;gene_biotype=protein_coding;gene_synonym=yjcC;locus_tag=CCO40_RS20335;old_locus_tag=CCO40_20335 NZ_CP075116.1 Protein Homology CDS 4242551 4244152 . - 0 ID=cds-WP_061378708.1;Parent=gene-CCO40_RS20335;Dbxref=GenBank:WP_061378708.1;Name=WP_061378708.1;Ontology_term=GO:0071111;gbkey=CDS;gene=pdeC;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463129.1;locus_tag=CCO40_RS20335;product=cyclic di-3'%2C5'-guanosine monophosphate phosphodiesterase PdeC;protein_id=WP_061378708.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4244714 4244995 . + . ID=gene-CCO40_RS20340;Name=CCO40_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20340;old_locus_tag=CCO40_20340 NZ_CP075116.1 Protein Homology CDS 4244714 4244995 . + 0 ID=cds-WP_000719058.1;Parent=gene-CCO40_RS20340;Dbxref=GenBank:WP_000719058.1;Name=WP_000719058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463128.1;locus_tag=CCO40_RS20340;product=YjcB family protein;protein_id=WP_000719058.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4245273 4247339 . - . ID=gene-CCO40_RS20345;Name=siiF;gbkey=Gene;gene=siiF;gene_biotype=protein_coding;locus_tag=CCO40_RS20345;old_locus_tag=CCO40_20345 NZ_CP075116.1 Protein Homology CDS 4245273 4247339 . - 0 ID=cds-WP_000358571.1;Parent=gene-CCO40_RS20345;Dbxref=GenBank:WP_000358571.1;Name=WP_000358571.1;gbkey=CDS;gene=siiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463127.1;locus_tag=CCO40_RS20345;product=SPI-4 type I secretion system protein SiiF;protein_id=WP_000358571.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4247379 4264064 . - . ID=gene-CCO40_RS20350;Name=siiE;gbkey=Gene;gene=siiE;gene_biotype=protein_coding;locus_tag=CCO40_RS20350;old_locus_tag=CCO40_20350 NZ_CP075116.1 Protein Homology CDS 4247379 4264064 . - 0 ID=cds-WP_094889055.1;Parent=gene-CCO40_RS20350;Dbxref=GenBank:WP_094889055.1;Name=WP_094889055.1;gbkey=CDS;gene=siiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=CCO40_RS20350;product=non-fimbrial adhesin SiiE;protein_id=WP_094889055.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4264081 4265358 . - . ID=gene-CCO40_RS20355;Name=siiD;gbkey=Gene;gene=siiD;gene_biotype=protein_coding;locus_tag=CCO40_RS20355;old_locus_tag=CCO40_20355 NZ_CP075116.1 Protein Homology CDS 4264081 4265358 . - 0 ID=cds-WP_001081935.1;Parent=gene-CCO40_RS20355;Dbxref=GenBank:WP_001081935.1;Name=WP_001081935.1;gbkey=CDS;gene=siiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=CCO40_RS20355;product=SPI-4 type I secretion system protein SiiD;protein_id=WP_001081935.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4265355 4266674 . - . ID=gene-CCO40_RS20360;Name=siiC;gbkey=Gene;gene=siiC;gene_biotype=protein_coding;locus_tag=CCO40_RS20360;old_locus_tag=CCO40_20360 NZ_CP075116.1 Protein Homology CDS 4265355 4266674 . - 0 ID=cds-WP_001682480.1;Parent=gene-CCO40_RS20360;Dbxref=GenBank:WP_001682480.1;Name=WP_001682480.1;gbkey=CDS;gene=siiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463124.1;locus_tag=CCO40_RS20360;product=SPI-4 type I secretion system protein SiiC;protein_id=WP_001682480.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4266664 4268052 . - . ID=gene-CCO40_RS20365;Name=CCO40_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20365;old_locus_tag=CCO40_20365 NZ_CP075116.1 Protein Homology CDS 4266664 4268052 . - 0 ID=cds-WP_000875184.1;Parent=gene-CCO40_RS20365;Dbxref=GenBank:WP_000875184.1;Name=WP_000875184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463123.1;locus_tag=CCO40_RS20365;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_000875184.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4268049 4268681 . - . ID=gene-CCO40_RS20370;Name=siiA;gbkey=Gene;gene=siiA;gene_biotype=protein_coding;locus_tag=CCO40_RS20370;old_locus_tag=CCO40_20370 NZ_CP075116.1 Protein Homology CDS 4268049 4268681 . - 0 ID=cds-WP_000389232.1;Parent=gene-CCO40_RS20370;Dbxref=GenBank:WP_000389232.1;Name=WP_000389232.1;gbkey=CDS;gene=siiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463122.1;locus_tag=CCO40_RS20370;product=SPI-4 type I secretion system auxiliary protein SiiA;protein_id=WP_000389232.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4269722 4270252 . - . ID=gene-CCO40_RS20375;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=CCO40_RS20375;old_locus_tag=CCO40_20375 NZ_CP075116.1 Protein Homology CDS 4269722 4270252 . - 0 ID=cds-WP_000168322.1;Parent=gene-CCO40_RS20375;Dbxref=GenBank:WP_000168322.1;Name=WP_000168322.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463121.1;locus_tag=CCO40_RS20375;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168322.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4270500 4273325 . + . ID=gene-CCO40_RS20380;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=CCO40_RS20380;old_locus_tag=CCO40_20380 NZ_CP075116.1 Protein Homology CDS 4270500 4273325 . + 0 ID=cds-WP_000357725.1;Parent=gene-CCO40_RS20380;Dbxref=GenBank:WP_000357725.1;Name=WP_000357725.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463119.1;locus_tag=CCO40_RS20380;product=excinuclease ABC subunit UvrA;protein_id=WP_000357725.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4273457 4273912 . + . ID=gene-CCO40_RS20385;Name=CCO40_RS20385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20385;old_locus_tag=CCO40_20385 NZ_CP075116.1 Protein Homology CDS 4273457 4273912 . + 0 ID=cds-WP_000432197.1;Parent=gene-CCO40_RS20385;Dbxref=GenBank:WP_000432197.1;Name=WP_000432197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463118.1;locus_tag=CCO40_RS20385;product=hypothetical protein;protein_id=WP_000432197.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4273899 4274237 . + . ID=gene-CCO40_RS20390;Name=CCO40_RS20390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20390;old_locus_tag=CCO40_20390 NZ_CP075116.1 Protein Homology CDS 4273899 4274237 . + 0 ID=cds-WP_000146587.1;Parent=gene-CCO40_RS20390;Dbxref=GenBank:WP_000146587.1;Name=WP_000146587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463117.1;locus_tag=CCO40_RS20390;product=hypothetical protein;protein_id=WP_000146587.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4274238 4274594 . - . ID=gene-CCO40_RS20395;Name=CCO40_RS20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20395;old_locus_tag=CCO40_20395 NZ_CP075116.1 Protein Homology CDS 4274238 4274594 . - 0 ID=cds-WP_000155663.1;Parent=gene-CCO40_RS20395;Dbxref=GenBank:WP_000155663.1;Name=WP_000155663.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463116.1;locus_tag=CCO40_RS20395;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155663.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4274597 4275013 . - . ID=gene-CCO40_RS20400;Name=CCO40_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20400;old_locus_tag=CCO40_20400 NZ_CP075116.1 Protein Homology CDS 4274597 4275013 . - 0 ID=cds-WP_000270392.1;Parent=gene-CCO40_RS20400;Dbxref=GenBank:WP_000270392.1;Name=WP_000270392.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463115.1;locus_tag=CCO40_RS20400;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_000270392.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4275142 4275855 . - . ID=gene-CCO40_RS20405;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=CCO40_RS20405;old_locus_tag=CCO40_20405 NZ_CP075116.1 Protein Homology CDS 4275142 4275855 . - 0 ID=cds-WP_000724431.1;Parent=gene-CCO40_RS20405;Dbxref=GenBank:WP_000724431.1;Name=WP_000724431.1;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463114.1;locus_tag=CCO40_RS20405;product=acid phosphatase AphA;protein_id=WP_000724431.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4276042 4277235 . - . ID=gene-CCO40_RS20410;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=CCO40_RS20410;old_locus_tag=CCO40_20410 NZ_CP075116.1 Protein Homology CDS 4276042 4277235 . - 0 ID=cds-WP_000486914.1;Parent=gene-CCO40_RS20410;Dbxref=GenBank:WP_000486914.1;Name=WP_000486914.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463113.1;locus_tag=CCO40_RS20410;product=aromatic amino acid transaminase;protein_id=WP_000486914.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4277421 4278500 . - . ID=gene-CCO40_RS20415;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=CCO40_RS20415;old_locus_tag=CCO40_20415 NZ_CP075116.1 Protein Homology CDS 4277421 4278500 . - 0 ID=cds-WP_001147297.1;Parent=gene-CCO40_RS20415;Dbxref=GenBank:WP_001147297.1;Name=WP_001147297.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463112.1;locus_tag=CCO40_RS20415;product=alanine racemase;protein_id=WP_001147297.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4278532 4279947 . - . ID=gene-CCO40_RS20420;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=CCO40_RS20420;old_locus_tag=CCO40_20420 NZ_CP075116.1 Protein Homology CDS 4278532 4279947 . - 0 ID=cds-WP_000918353.1;Parent=gene-CCO40_RS20420;Dbxref=GenBank:WP_000918353.1;Name=WP_000918353.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463111.1;locus_tag=CCO40_RS20420;product=replicative DNA helicase;protein_id=WP_000918353.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4280012 4280995 . + . ID=gene-CCO40_RS20425;Name=CCO40_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20425;old_locus_tag=CCO40_20425 NZ_CP075116.1 Protein Homology CDS 4280012 4280995 . + 0 ID=cds-WP_000235550.1;Parent=gene-CCO40_RS20425;Dbxref=GenBank:WP_000235550.1;Name=WP_000235550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463110.1;locus_tag=CCO40_RS20425;product=quinone oxidoreductase;protein_id=WP_000235550.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4281170 4281412 . - . ID=gene-CCO40_RS20430;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=CCO40_RS20430;old_locus_tag=CCO40_20430 NZ_CP075116.1 Protein Homology CDS 4281170 4281412 . - 0 ID=cds-WP_000891414.1;Parent=gene-CCO40_RS20430;Dbxref=GenBank:WP_000891414.1;Name=WP_000891414.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463109.1;locus_tag=CCO40_RS20430;product=envelope stress response protein PspG;protein_id=WP_000891414.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4281580 4282578 . - . ID=gene-CCO40_RS20435;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=CCO40_RS20435;old_locus_tag=CCO40_20435 NZ_CP075116.1 Protein Homology CDS 4281580 4282578 . - 0 ID=cds-WP_001182224.1;Parent=gene-CCO40_RS20435;Dbxref=GenBank:WP_001182224.1;Name=WP_001182224.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463108.1;locus_tag=CCO40_RS20435;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_001182224.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4282666 4283976 . - . ID=gene-CCO40_RS20440;Name=CCO40_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20440;old_locus_tag=CCO40_20440 NZ_CP075116.1 Protein Homology CDS 4282666 4283976 . - 0 ID=cds-WP_001039342.1;Parent=gene-CCO40_RS20440;Dbxref=GenBank:WP_001039342.1;Name=WP_001039342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=CCO40_RS20440;product=conjugal transfer protein TraF;protein_id=WP_001039342.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4284223 4284738 . + . ID=gene-CCO40_RS20445;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=CCO40_RS20445;old_locus_tag=CCO40_20445 NZ_CP075116.1 Protein Homology CDS 4284223 4284738 . + 0 ID=cds-WP_000416271.1;Parent=gene-CCO40_RS20445;Dbxref=GenBank:WP_000416271.1;Name=WP_000416271.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463106.1;locus_tag=CCO40_RS20445;product=zinc uptake transcriptional repressor Zur;protein_id=WP_000416271.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4284837 4285046 . - . ID=gene-CCO40_RS20450;Name=CCO40_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20450;old_locus_tag=CCO40_20450 NZ_CP075116.1 Protein Homology CDS 4284837 4285046 . - 0 ID=cds-WP_001030592.1;Parent=gene-CCO40_RS20450;Dbxref=GenBank:WP_001030592.1;Name=WP_001030592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=CCO40_RS20450;product=CsbD family protein;protein_id=WP_001030592.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4285068 4285181 . - . ID=gene-CCO40_RS20455;Name=CCO40_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20455;old_locus_tag=CCO40_20455 NZ_CP075116.1 Protein Homology CDS 4285068 4285181 . - 0 ID=cds-WP_001575282.1;Parent=gene-CCO40_RS20455;Dbxref=GenBank:WP_001575282.1;Name=WP_001575282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=CCO40_RS20455;product=hypothetical protein;protein_id=WP_001575282.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4285178 4286503 . - . ID=gene-CCO40_RS20460;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=CCO40_RS20460;old_locus_tag=CCO40_20460 NZ_CP075116.1 Protein Homology CDS 4285178 4286503 . - 0 ID=cds-WP_001128112.1;Parent=gene-CCO40_RS20460;Dbxref=GenBank:WP_001128112.1;Name=WP_001128112.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463103.1;locus_tag=CCO40_RS20460;product=MATE family efflux transporter DinF;protein_id=WP_001128112.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4286682 4287290 . - . ID=gene-CCO40_RS20465;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=CCO40_RS20465;old_locus_tag=CCO40_20465 NZ_CP075116.1 Protein Homology CDS 4286682 4287290 . - 0 ID=cds-WP_000646079.1;Parent=gene-CCO40_RS20465;Dbxref=GenBank:WP_000646079.1;Name=WP_000646079.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=CCO40_RS20465;product=transcriptional repressor LexA;protein_id=WP_000646079.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4287399 4287767 . - . ID=gene-CCO40_RS20470;Name=CCO40_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20470;old_locus_tag=CCO40_20470 NZ_CP075116.1 Protein Homology CDS 4287399 4287767 . - 0 ID=cds-WP_000002900.1;Parent=gene-CCO40_RS20470;Dbxref=GenBank:WP_000002900.1;Name=WP_000002900.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463101.1;locus_tag=CCO40_RS20470;product=diacylglycerol kinase;protein_id=WP_000002900.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4287938 4290358 . + . ID=gene-CCO40_RS20475;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=CCO40_RS20475;old_locus_tag=CCO40_20475 NZ_CP075116.1 Protein Homology CDS 4287938 4290358 . + 0 ID=cds-WP_000017360.1;Parent=gene-CCO40_RS20475;Dbxref=GenBank:WP_000017360.1;Name=WP_000017360.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=CCO40_RS20475;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_000017360.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4290457 4291329 . - . ID=gene-CCO40_RS20480;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=CCO40_RS20480;old_locus_tag=CCO40_20480 NZ_CP075116.1 Protein Homology CDS 4290457 4291329 . - 0 ID=cds-WP_000455249.1;Parent=gene-CCO40_RS20480;Dbxref=GenBank:WP_000455249.1;Name=WP_000455249.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463099.1;locus_tag=CCO40_RS20480;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455249.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4291343 4291840 . - . ID=gene-CCO40_RS20485;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=CCO40_RS20485;old_locus_tag=CCO40_20485 NZ_CP075116.1 Protein Homology CDS 4291343 4291840 . - 0 ID=cds-WP_000019230.1;Parent=gene-CCO40_RS20485;Dbxref=GenBank:WP_000019230.1;Name=WP_000019230.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463098.1;locus_tag=CCO40_RS20485;product=chorismate lyase;protein_id=WP_000019230.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4292021 4292938 . - . ID=gene-CCO40_RS20490;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=CCO40_RS20490;old_locus_tag=CCO40_20490 NZ_CP075116.1 Protein Homology CDS 4292021 4292938 . - 0 ID=cds-WP_000782497.1;Parent=gene-CCO40_RS20490;Dbxref=GenBank:WP_000782497.1;Name=WP_000782497.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463097.1;locus_tag=CCO40_RS20490;product=maltose operon protein MalM;protein_id=WP_000782497.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4293102 4294460 . - . ID=gene-CCO40_RS20495;Name=CCO40_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20495;old_locus_tag=CCO40_20495 NZ_CP075116.1 Protein Homology CDS 4293102 4294460 . - 0 ID=cds-WP_000973681.1;Parent=gene-CCO40_RS20495;Dbxref=GenBank:WP_000973681.1;Name=WP_000973681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463096.1;locus_tag=CCO40_RS20495;product=maltoporin;protein_id=WP_000973681.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4294549 4295658 . - . ID=gene-CCO40_RS20500;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=CCO40_RS20500;old_locus_tag=CCO40_20500 NZ_CP075116.1 Protein Homology CDS 4294549 4295658 . - 0 ID=cds-WP_000179176.1;Parent=gene-CCO40_RS20500;Dbxref=GenBank:WP_000179176.1;Name=WP_000179176.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=CCO40_RS20500;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_000179176.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4296020 4297210 . + . ID=gene-CCO40_RS20505;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=CCO40_RS20505;old_locus_tag=CCO40_20505 NZ_CP075116.1 Protein Homology CDS 4296020 4297210 . + 0 ID=cds-WP_000695415.1;Parent=gene-CCO40_RS20505;Dbxref=GenBank:WP_000695415.1;Name=WP_000695415.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=CCO40_RS20505;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695415.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 4297159 4297299 . - . ID=gene-CCO40_RS22745;Name=CCO40_RS22745;end_range=4297299,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22745;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 4297159 4297299 . - 0 ID=cds-CCO40_RS22745;Parent=gene-CCO40_RS22745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4297299,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=CCO40_RS22745;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 4297342 4298886 . + . ID=gene-CCO40_RS20510;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=CCO40_RS20510;old_locus_tag=CCO40_20510 NZ_CP075116.1 Protein Homology CDS 4297342 4298886 . + 0 ID=cds-WP_094889056.1;Parent=gene-CCO40_RS20510;Dbxref=GenBank:WP_094889056.1;Name=WP_094889056.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=CCO40_RS20510;product=maltose ABC transporter permease MalF;protein_id=WP_094889056.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4298901 4299791 . + . ID=gene-CCO40_RS20515;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=CCO40_RS20515;old_locus_tag=CCO40_20515 NZ_CP075116.1 Protein Homology CDS 4298901 4299791 . + 0 ID=cds-WP_001252085.1;Parent=gene-CCO40_RS20515;Dbxref=GenBank:WP_001252085.1;Name=WP_001252085.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463092.1;locus_tag=CCO40_RS20515;product=maltose ABC transporter permease MalG;protein_id=WP_001252085.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4299957 4300367 . - . ID=gene-CCO40_RS20520;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=CCO40_RS20520;old_locus_tag=CCO40_20520 NZ_CP075116.1 Protein Homology CDS 4299957 4300367 . - 0 ID=cds-WP_000982749.1;Parent=gene-CCO40_RS20520;Dbxref=GenBank:WP_000982749.1;Name=WP_000982749.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463091.1;locus_tag=CCO40_RS20520;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000982749.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4300510 4302606 . - . ID=gene-CCO40_RS20525;Name=CCO40_RS20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20525;old_locus_tag=CCO40_20525 NZ_CP075116.1 Protein Homology CDS 4300510 4302606 . - 0 ID=cds-WP_000750804.1;Parent=gene-CCO40_RS20525;Dbxref=GenBank:WP_000750804.1;Name=WP_000750804.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=CCO40_RS20525;product=YjbH domain-containing protein;protein_id=WP_000750804.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4302606 4303343 . - . ID=gene-CCO40_RS20530;Name=CCO40_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20530;old_locus_tag=CCO40_20530 NZ_CP075116.1 Protein Homology CDS 4302606 4303343 . - 0 ID=cds-WP_000977979.1;Parent=gene-CCO40_RS20530;Dbxref=GenBank:WP_000977979.1;Name=WP_000977979.1;Ontology_term=GO:0042603;gbkey=CDS;go_component=capsule|0042603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463089.1;locus_tag=CCO40_RS20530;product=capsule biosynthesis GfcC family protein;protein_id=WP_000977979.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4303340 4303978 . - . ID=gene-CCO40_RS20535;Name=CCO40_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20535;old_locus_tag=CCO40_20535 NZ_CP075116.1 Protein Homology CDS 4303340 4303978 . - 0 ID=cds-WP_000824800.1;Parent=gene-CCO40_RS20535;Dbxref=GenBank:WP_000824800.1;Name=WP_000824800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824802.1;locus_tag=CCO40_RS20535;product=YjbF family lipoprotein;protein_id=WP_000824800.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4304042 4304284 . - . ID=gene-CCO40_RS20540;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=CCO40_RS20540;old_locus_tag=CCO40_20540 NZ_CP075116.1 Protein Homology CDS 4304042 4304284 . - 0 ID=cds-WP_001541297.1;Parent=gene-CCO40_RS20540;Dbxref=GenBank:WP_001541297.1;Name=WP_001541297.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=CCO40_RS20540;product=exopolysaccharide production protein YjbE;protein_id=WP_001541297.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4304728 4306377 . - . ID=gene-CCO40_RS20545;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=CCO40_RS20545;old_locus_tag=CCO40_20545 NZ_CP075116.1 Protein Homology CDS 4304728 4306377 . - 0 ID=cds-WP_000790037.1;Parent=gene-CCO40_RS20545;Dbxref=GenBank:WP_000790037.1;Name=WP_000790037.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=CCO40_RS20545;product=glucose-6-phosphate isomerase;protein_id=WP_000790037.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4306722 4308071 . + . ID=gene-CCO40_RS20550;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=CCO40_RS20550;old_locus_tag=CCO40_20550 NZ_CP075116.1 Protein Homology CDS 4306722 4308071 . + 0 ID=cds-WP_000136400.1;Parent=gene-CCO40_RS20550;Dbxref=GenBank:WP_000136400.1;Name=WP_000136400.1;Ontology_term=GO:0009085,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463085.1;locus_tag=CCO40_RS20550;product=lysine-sensitive aspartokinase 3;protein_id=WP_000136400.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4308204 4308551 . - . ID=gene-CCO40_RS20555;Name=CCO40_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20555;old_locus_tag=CCO40_20555 NZ_CP075116.1 Protein Homology CDS 4308204 4308551 . - 0 ID=cds-WP_000615248.1;Parent=gene-CCO40_RS20555;Dbxref=GenBank:WP_000615248.1;Name=WP_000615248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615246.1;locus_tag=CCO40_RS20555;product=Mor transcription activator family protein;protein_id=WP_000615248.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4309127 4309414 . + . ID=gene-CCO40_RS20560;Name=CCO40_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20560;old_locus_tag=CCO40_20560 NZ_CP075116.1 Protein Homology CDS 4309127 4309414 . + 0 ID=cds-WP_001226442.1;Parent=gene-CCO40_RS20560;Dbxref=GenBank:WP_001226442.1;Name=WP_001226442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463083.1;locus_tag=CCO40_RS20560;product=putative holin;protein_id=WP_001226442.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4309417 4310022 . + . ID=gene-CCO40_RS20565;Name=CCO40_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20565;old_locus_tag=CCO40_20565 NZ_CP075116.1 Protein Homology CDS 4309417 4310022 . + 0 ID=cds-WP_001270441.1;Parent=gene-CCO40_RS20565;Dbxref=GenBank:WP_001270441.1;Name=WP_001270441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463082.1;locus_tag=CCO40_RS20565;product=transglycosylase SLT domain-containing protein;protein_id=WP_001270441.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4310035 4310349 . + . ID=gene-CCO40_RS20570;Name=CCO40_RS20570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20570;old_locus_tag=CCO40_20570 NZ_CP075116.1 Protein Homology CDS 4310035 4310349 . + 0 ID=cds-WP_000777266.1;Parent=gene-CCO40_RS20570;Dbxref=GenBank:WP_000777266.1;Name=WP_000777266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463081.1;locus_tag=CCO40_RS20570;product=membrane protein;protein_id=WP_000777266.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4310509 4310964 . + . ID=gene-CCO40_RS20575;Name=CCO40_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20575;old_locus_tag=CCO40_20575 NZ_CP075116.1 Protein Homology CDS 4310509 4310964 . + 0 ID=cds-WP_000449433.1;Parent=gene-CCO40_RS20575;Dbxref=GenBank:WP_000449433.1;Name=WP_000449433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463080.1;locus_tag=CCO40_RS20575;product=Gp37 family protein;protein_id=WP_000449433.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4310961 4311158 . + . ID=gene-CCO40_RS20580;Name=CCO40_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20580;old_locus_tag=CCO40_20580 NZ_CP075116.1 Protein Homology CDS 4310961 4311158 . + 0 ID=cds-WP_000875314.1;Parent=gene-CCO40_RS20580;Dbxref=GenBank:WP_000875314.1;Name=WP_000875314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463079.1;locus_tag=CCO40_RS20580;product=hypothetical protein;protein_id=WP_000875314.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4311148 4312575 . + . ID=gene-CCO40_RS20585;Name=CCO40_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20585;old_locus_tag=CCO40_20585 NZ_CP075116.1 Protein Homology CDS 4311148 4312575 . + 0 ID=cds-WP_000729852.1;Parent=gene-CCO40_RS20585;Dbxref=GenBank:WP_000729852.1;Name=WP_000729852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463078.1;locus_tag=CCO40_RS20585;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_000729852.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4312575 4313099 . + . ID=gene-CCO40_RS20590;Name=CCO40_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20590;old_locus_tag=CCO40_20590 NZ_CP075116.1 Protein Homology CDS 4312575 4313099 . + 0 ID=cds-WP_000907497.1;Parent=gene-CCO40_RS20590;Dbxref=GenBank:WP_000907497.1;Name=WP_000907497.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463077.1;locus_tag=CCO40_RS20590;product=phage major tail tube protein;protein_id=WP_000907497.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4313151 4313468 . + . ID=gene-CCO40_RS20595;Name=CCO40_RS20595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20595;old_locus_tag=CCO40_20595 NZ_CP075116.1 Protein Homology CDS 4313151 4313468 . + 0 ID=cds-WP_001003642.1;Parent=gene-CCO40_RS20595;Dbxref=GenBank:WP_001003642.1;Name=WP_001003642.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001003637.1;locus_tag=CCO40_RS20595;product=phage tail assembly protein;protein_id=WP_001003642.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4313428 4313556 . + . ID=gene-CCO40_RS20600;Name=CCO40_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20600;old_locus_tag=CCO40_20600 NZ_CP075116.1 Protein Homology CDS 4313428 4313556 . + 0 ID=cds-WP_001185654.1;Parent=gene-CCO40_RS20600;Dbxref=GenBank:WP_001185654.1;Name=WP_001185654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728452.1;locus_tag=CCO40_RS20600;product=GpE family phage tail protein;protein_id=WP_001185654.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4313653 4316007 . + . ID=gene-CCO40_RS20605;Name=CCO40_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20605;old_locus_tag=CCO40_20605 NZ_CP075116.1 Protein Homology CDS 4313653 4316007 . + 0 ID=cds-WP_094889057.1;Parent=gene-CCO40_RS20605;Dbxref=GenBank:WP_094889057.1;Name=WP_094889057.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463076.1;locus_tag=CCO40_RS20605;product=phage tail tape measure protein;protein_id=WP_094889057.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4316007 4316960 . + . ID=gene-CCO40_RS20610;Name=CCO40_RS20610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20610;old_locus_tag=CCO40_20610 NZ_CP075116.1 Protein Homology CDS 4316007 4316960 . + 0 ID=cds-WP_000271423.1;Parent=gene-CCO40_RS20610;Dbxref=GenBank:WP_000271423.1;Name=WP_000271423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463075.1;locus_tag=CCO40_RS20610;product=phage tail protein;protein_id=WP_000271423.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4316960 4317169 . + . ID=gene-CCO40_RS20615;Name=CCO40_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20615;old_locus_tag=CCO40_20615 NZ_CP075116.1 Protein Homology CDS 4316960 4317169 . + 0 ID=cds-WP_001269716.1;Parent=gene-CCO40_RS20615;Dbxref=GenBank:WP_001269716.1;Name=WP_001269716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463074.1;locus_tag=CCO40_RS20615;product=tail protein X;protein_id=WP_001269716.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4317157 4318200 . + . ID=gene-CCO40_RS20620;Name=CCO40_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20620;old_locus_tag=CCO40_20620 NZ_CP075116.1 Protein Homology CDS 4317157 4318200 . + 0 ID=cds-WP_000818154.1;Parent=gene-CCO40_RS20620;Dbxref=GenBank:WP_000818154.1;Name=WP_000818154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463073.1;locus_tag=CCO40_RS20620;product=phage late control D family protein;protein_id=WP_000818154.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4318210 4318932 . + . ID=gene-CCO40_RS20625;Name=CCO40_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20625;old_locus_tag=CCO40_20625 NZ_CP075116.1 Protein Homology CDS 4318210 4318932 . + 0 ID=cds-WP_000679398.1;Parent=gene-CCO40_RS20625;Dbxref=GenBank:WP_000679398.1;Name=WP_000679398.1;Ontology_term=GO:0098003,GO:0046872,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_function=metal ion binding|0046872||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463072.1;locus_tag=CCO40_RS20625;product=phage baseplate assembly protein V;protein_id=WP_000679398.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4319260 4319622 . + . ID=gene-CCO40_RS20630;Name=CCO40_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20630;old_locus_tag=CCO40_20630 NZ_CP075116.1 Protein Homology CDS 4319260 4319622 . + 0 ID=cds-WP_000593182.1;Parent=gene-CCO40_RS20630;Dbxref=GenBank:WP_000593182.1;Name=WP_000593182.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463071.1;locus_tag=CCO40_RS20630;product=GtrA family protein;protein_id=WP_000593182.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4319619 4320548 . + . ID=gene-CCO40_RS20635;Name=CCO40_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20635;old_locus_tag=CCO40_20635 NZ_CP075116.1 Protein Homology CDS 4319619 4320548 . + 0 ID=cds-WP_000703633.1;Parent=gene-CCO40_RS20635;Dbxref=GenBank:WP_000703633.1;Name=WP_000703633.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463070.1;locus_tag=CCO40_RS20635;product=glycosyltransferase family 2 protein;protein_id=WP_000703633.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4320548 4322095 . + . ID=gene-CCO40_RS20640;Name=CCO40_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20640;old_locus_tag=CCO40_20640 NZ_CP075116.1 Protein Homology CDS 4320548 4322095 . + 0 ID=cds-WP_000632053.1;Parent=gene-CCO40_RS20640;Dbxref=GenBank:WP_000632053.1;Name=WP_000632053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463069.1;locus_tag=CCO40_RS20640;product=DUF6056 family protein;protein_id=WP_000632053.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4322259 4322618 . + . ID=gene-CCO40_RS20645;Name=CCO40_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20645;old_locus_tag=CCO40_20645 NZ_CP075116.1 Protein Homology CDS 4322259 4322618 . + 0 ID=cds-WP_001093501.1;Parent=gene-CCO40_RS20645;Dbxref=GenBank:WP_001093501.1;Name=WP_001093501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463068.1;locus_tag=CCO40_RS20645;product=GPW/gp25 family protein;protein_id=WP_001093501.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4322609 4323724 . + . ID=gene-CCO40_RS20650;Name=CCO40_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20650;old_locus_tag=CCO40_20650 NZ_CP075116.1 Protein Homology CDS 4322609 4323724 . + 0 ID=cds-WP_000951734.1;Parent=gene-CCO40_RS20650;Dbxref=GenBank:WP_000951734.1;Name=WP_000951734.1;Ontology_term=GO:0098045,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_process=virus baseplate assembly|0098045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463067.1;locus_tag=CCO40_RS20650;product=baseplate assembly protein;protein_id=WP_000951734.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4323717 4324349 . + . ID=gene-CCO40_RS20655;Name=CCO40_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20655;old_locus_tag=CCO40_20655 NZ_CP075116.1 Protein Homology CDS 4323717 4324349 . + 0 ID=cds-WP_000359509.1;Parent=gene-CCO40_RS20655;Dbxref=GenBank:WP_000359509.1;Name=WP_000359509.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463066.1;locus_tag=CCO40_RS20655;product=phage tail protein I;protein_id=WP_000359509.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4324352 4326010 . + . ID=gene-CCO40_RS20660;Name=CCO40_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20660;old_locus_tag=CCO40_20660 NZ_CP075116.1 Protein Homology CDS 4324352 4326010 . + 0 ID=cds-WP_000368193.1;Parent=gene-CCO40_RS20660;Dbxref=GenBank:WP_000368193.1;Name=WP_000368193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441266.1;locus_tag=CCO40_RS20660;product=phage tail-collar fiber domain-containing protein;protein_id=WP_000368193.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4326017 4326631 . + . ID=gene-CCO40_RS20665;Name=CCO40_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20665;old_locus_tag=CCO40_20665 NZ_CP075116.1 Protein Homology CDS 4326017 4326631 . + 0 ID=cds-WP_001151758.1;Parent=gene-CCO40_RS20665;Dbxref=GenBank:WP_001151758.1;Name=WP_001151758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151757.1;locus_tag=CCO40_RS20665;product=DUF4376 domain-containing protein;protein_id=WP_001151758.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4326628 4327071 . + . ID=gene-CCO40_RS20670;Name=CCO40_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20670;old_locus_tag=CCO40_20670 NZ_CP075116.1 Protein Homology CDS 4326628 4327071 . + 0 ID=cds-WP_000084335.1;Parent=gene-CCO40_RS20670;Dbxref=GenBank:WP_000084335.1;Name=WP_000084335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463063.1;locus_tag=CCO40_RS20670;product=hypothetical protein;protein_id=WP_000084335.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 4327324 4327550 . + . ID=gene-CCO40_RS22580;Name=CCO40_RS22580;end_range=4327550,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22580;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 4327324 4327550 . + 0 ID=cds-CCO40_RS22580;Parent=gene-CCO40_RS22580;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4327550,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463062.1;locus_tag=CCO40_RS22580;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 4327581 4327874 . + . ID=gene-CCO40_RS20675;Name=CCO40_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20675;old_locus_tag=CCO40_20675 NZ_CP075116.1 Protein Homology CDS 4327581 4327874 . + 0 ID=cds-WP_223164639.1;Parent=gene-CCO40_RS20675;Dbxref=GenBank:WP_223164639.1;Name=WP_223164639.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025953.7;locus_tag=CCO40_RS20675;product=DapH/DapD/GlmU-related protein;protein_id=WP_223164639.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 4328189 4328251 . + . ID=gene-CCO40_RS22585;Name=CCO40_RS22585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22585;partial=true;pseudo=true;start_range=.,4328189 NZ_CP075116.1 Protein Homology CDS 4328189 4328251 . + 0 ID=cds-CCO40_RS22585;Parent=gene-CCO40_RS22585;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463062.1;locus_tag=CCO40_RS22585;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4328189;transl_table=11 NZ_CP075116.1 RefSeq gene 4328448 4329176 . + . ID=gene-CCO40_RS20680;Name=CCO40_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20680;old_locus_tag=CCO40_20680 NZ_CP075116.1 Protein Homology CDS 4328448 4329176 . + 0 ID=cds-WP_000587740.1;Parent=gene-CCO40_RS20680;Dbxref=GenBank:WP_000587740.1;Name=WP_000587740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463061.1;locus_tag=CCO40_RS20680;product=hypothetical protein;protein_id=WP_000587740.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4329438 4330379 . + . ID=gene-CCO40_RS20685;Name=panS;gbkey=Gene;gene=panS;gene_biotype=protein_coding;locus_tag=CCO40_RS20685;old_locus_tag=CCO40_20685 NZ_CP075116.1 Protein Homology CDS 4329438 4330379 . + 0 ID=cds-WP_000881647.1;Parent=gene-CCO40_RS20685;Dbxref=GenBank:WP_000881647.1;Name=WP_000881647.1;gbkey=CDS;gene=panS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463060.1;locus_tag=CCO40_RS20685;product=ketopantoate/pantoate/pantothenate transporter PanS;protein_id=WP_000881647.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4330477 4330749 . + . ID=gene-CCO40_RS20690;Name=CCO40_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20690;old_locus_tag=CCO40_20690 NZ_CP075116.1 Protein Homology CDS 4330477 4330749 . + 0 ID=cds-WP_001207628.1;Parent=gene-CCO40_RS20690;Dbxref=GenBank:WP_001207628.1;Name=WP_001207628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463059.1;locus_tag=CCO40_RS20690;product=YjbD family protein;protein_id=WP_001207628.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4330746 4331615 . - . ID=gene-CCO40_RS20695;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=CCO40_RS20695;old_locus_tag=CCO40_20695 NZ_CP075116.1 Protein Homology CDS 4330746 4331615 . - 0 ID=cds-WP_000954611.1;Parent=gene-CCO40_RS20695;Dbxref=GenBank:WP_000954611.1;Name=WP_000954611.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=CCO40_RS20695;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_000954611.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4331662 4332201 . - . ID=gene-CCO40_RS20700;Name=CCO40_RS20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20700;old_locus_tag=CCO40_20700 NZ_CP075116.1 Protein Homology CDS 4331662 4332201 . - 0 ID=cds-WP_001096724.1;Parent=gene-CCO40_RS20700;Dbxref=GenBank:WP_001096724.1;Name=WP_001096724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=CCO40_RS20700;product=DUF2058 domain-containing protein;protein_id=WP_001096724.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4332236 4332337 . - . ID=gene-CCO40_RS20705;Name=CCO40_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20705;old_locus_tag=CCO40_20705 NZ_CP075116.1 Protein Homology CDS 4332236 4332337 . - 0 ID=cds-WP_031610567.1;Parent=gene-CCO40_RS20705;Dbxref=GenBank:WP_031610567.1;Name=WP_031610567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=CCO40_RS20705;product=hypothetical protein;protein_id=WP_031610567.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4332409 4333098 . + . ID=gene-CCO40_RS20710;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=CCO40_RS20710;old_locus_tag=CCO40_20710 NZ_CP075116.1 Protein Homology CDS 4332409 4333098 . + 0 ID=cds-WP_000421776.1;Parent=gene-CCO40_RS20710;Dbxref=GenBank:WP_000421776.1;Name=WP_000421776.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463055.1;locus_tag=CCO40_RS20710;product=dipeptidase PepE;protein_id=WP_000421776.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4333174 4334805 . - . ID=gene-CCO40_RS20715;Name=CCO40_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20715;old_locus_tag=CCO40_20715 NZ_CP075116.1 Protein Homology CDS 4333174 4334805 . - 0 ID=cds-WP_000956811.1;Parent=gene-CCO40_RS20715;Dbxref=GenBank:WP_000956811.1;Name=WP_000956811.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=CCO40_RS20715;product=Na/Pi cotransporter family protein;protein_id=WP_000956811.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4335072 4338755 . - . ID=gene-CCO40_RS20720;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=CCO40_RS20720;old_locus_tag=CCO40_20720 NZ_CP075116.1 Protein Homology CDS 4335072 4338755 . - 0 ID=cds-WP_000095956.1;Parent=gene-CCO40_RS20720;Dbxref=GenBank:WP_000095956.1;Name=WP_000095956.1;Ontology_term=GO:0071265,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312964.1;locus_tag=CCO40_RS20720;product=methionine synthase;protein_id=WP_000095956.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4339059 4339883 . + . ID=gene-CCO40_RS20725;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=CCO40_RS20725;old_locus_tag=CCO40_20725 NZ_CP075116.1 Protein Homology CDS 4339059 4339883 . + 0 ID=cds-WP_000226434.1;Parent=gene-CCO40_RS20725;Dbxref=GenBank:WP_000226434.1;Name=WP_000226434.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463052.1;locus_tag=CCO40_RS20725;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_000226434.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4339894 4340301 . + . ID=gene-CCO40_RS20730;Name=CCO40_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20730;old_locus_tag=CCO40_20730 NZ_CP075116.1 Protein Homology CDS 4339894 4340301 . + 0 ID=cds-WP_010989091.1;Parent=gene-CCO40_RS20730;Dbxref=GenBank:WP_010989091.1;Name=WP_010989091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=CCO40_RS20730;product=ASCH domain-containing protein;protein_id=WP_010989091.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4340265 4342016 . - . ID=gene-CCO40_RS20735;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=CCO40_RS20735;old_locus_tag=CCO40_20735 NZ_CP075116.1 Protein Homology CDS 4340265 4342016 . - 0 ID=cds-WP_001137278.1;Parent=gene-CCO40_RS20735;Dbxref=GenBank:WP_001137278.1;Name=WP_001137278.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=CCO40_RS20735;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_001137278.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4342118 4343422 . - . ID=gene-CCO40_RS20740;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=CCO40_RS20740;old_locus_tag=CCO40_20740 NZ_CP075116.1 Protein Homology CDS 4342118 4343422 . - 0 ID=cds-WP_000857882.1;Parent=gene-CCO40_RS20740;Dbxref=GenBank:WP_000857882.1;Name=WP_000857882.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=CCO40_RS20740;product=isocitrate lyase;protein_id=WP_000857882.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4343454 4345055 . - . ID=gene-CCO40_RS20745;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=CCO40_RS20745;old_locus_tag=CCO40_20745 NZ_CP075116.1 Protein Homology CDS 4343454 4345055 . - 0 ID=cds-WP_001069371.1;Parent=gene-CCO40_RS20745;Dbxref=GenBank:WP_001069371.1;Name=WP_001069371.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463048.1;locus_tag=CCO40_RS20745;product=malate synthase A;protein_id=WP_001069371.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4345324 4346253 . - . ID=gene-CCO40_RS20750;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=CCO40_RS20750;old_locus_tag=CCO40_20750 NZ_CP075116.1 Protein Homology CDS 4345324 4346253 . - 0 ID=cds-WP_001122767.1;Parent=gene-CCO40_RS20750;Dbxref=GenBank:WP_001122767.1;Name=WP_001122767.1;Ontology_term=GO:0071266,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process='de novo' L-methionine biosynthetic process|0071266||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=CCO40_RS20750;product=homoserine O-acetyltransferase MetA;protein_id=WP_001122767.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4346410 4346847 . + . ID=gene-CCO40_RS20755;Name=CCO40_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20755;old_locus_tag=CCO40_20755 NZ_CP075116.1 Protein Homology CDS 4346410 4346847 . + 0 ID=cds-WP_000973248.1;Parent=gene-CCO40_RS20755;Dbxref=GenBank:WP_000973248.1;Name=WP_000973248.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463046.1;locus_tag=CCO40_RS20755;product=acetyltransferase;protein_id=WP_000973248.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4347180 4347295 . - . ID=gene-CCO40_RS20760;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO40_RS20760;old_locus_tag=CCO40_20760 NZ_CP075116.1 cmsearch rRNA 4347180 4347295 . - . ID=rna-CCO40_RS20760;Parent=gene-CCO40_RS20760;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS20760;product=5S ribosomal RNA NZ_CP075116.1 cmsearch exon 4347180 4347295 . - . ID=exon-CCO40_RS20760-1;Parent=rna-CCO40_RS20760;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS20760;product=5S ribosomal RNA NZ_CP075116.1 RefSeq gene 4347498 4350503 . - . ID=gene-CCO40_RS20765;Name=CCO40_RS20765;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO40_RS20765;old_locus_tag=CCO40_20765 NZ_CP075116.1 cmsearch rRNA 4347498 4350503 . - . ID=rna-CCO40_RS20765;Parent=gene-CCO40_RS20765;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS20765;product=23S ribosomal RNA NZ_CP075116.1 cmsearch exon 4347498 4350503 . - . ID=exon-CCO40_RS20765-1;Parent=rna-CCO40_RS20765;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS20765;product=23S ribosomal RNA NZ_CP075116.1 RefSeq gene 4350697 4350772 . - . ID=gene-CCO40_RS20770;Name=CCO40_RS20770;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS20770;old_locus_tag=CCO40_20770 NZ_CP075116.1 tRNAscan-SE tRNA 4350697 4350772 . - . ID=rna-CCO40_RS20770;Parent=gene-CCO40_RS20770;anticodon=(pos:complement(4350736..4350738));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS20770;product=tRNA-Glu NZ_CP075116.1 tRNAscan-SE exon 4350697 4350772 . - . ID=exon-CCO40_RS20770-1;Parent=rna-CCO40_RS20770;anticodon=(pos:complement(4350736..4350738));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS20770;product=tRNA-Glu NZ_CP075116.1 RefSeq gene 4350858 4352399 . - . ID=gene-CCO40_RS20775;Name=CCO40_RS20775;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO40_RS20775;old_locus_tag=CCO40_20775 NZ_CP075116.1 cmsearch rRNA 4350858 4352399 . - . ID=rna-CCO40_RS20775;Parent=gene-CCO40_RS20775;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS20775;product=16S ribosomal RNA NZ_CP075116.1 cmsearch exon 4350858 4352399 . - . ID=exon-CCO40_RS20775-1;Parent=rna-CCO40_RS20775;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS20775;product=16S ribosomal RNA NZ_CP075116.1 RefSeq gene 4353025 4354614 . + . ID=gene-CCO40_RS20780;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=CCO40_RS20780;old_locus_tag=CCO40_20780 NZ_CP075116.1 Protein Homology CDS 4353025 4354614 . + 0 ID=cds-WP_045717782.1;Parent=gene-CCO40_RS20780;Dbxref=GenBank:WP_045717782.1;Name=WP_045717782.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=CCO40_RS20780;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_045717782.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4354630 4355919 . + . ID=gene-CCO40_RS20785;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=CCO40_RS20785;old_locus_tag=CCO40_20785 NZ_CP075116.1 Protein Homology CDS 4354630 4355919 . + 0 ID=cds-WP_045717781.1;Parent=gene-CCO40_RS20785;Dbxref=GenBank:WP_045717781.1;Name=WP_045717781.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463044.1;locus_tag=CCO40_RS20785;product=phosphoribosylamine--glycine ligase;protein_id=WP_045717781.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4355916 4357241 . - . ID=gene-CCO40_RS20790;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=CCO40_RS20790;old_locus_tag=CCO40_20790 NZ_CP075116.1 Protein Homology CDS 4355916 4357241 . - 0 ID=cds-WP_000617928.1;Parent=gene-CCO40_RS20790;Dbxref=GenBank:WP_000617928.1;Name=WP_000617928.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463043.1;locus_tag=CCO40_RS20790;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_000617928.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4357247 4358644 . - . ID=gene-CCO40_RS20795;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=CCO40_RS20795;old_locus_tag=CCO40_20795 NZ_CP075116.1 Protein Homology CDS 4357247 4358644 . - 0 ID=cds-WP_001536289.1;Parent=gene-CCO40_RS20795;Dbxref=GenBank:WP_001536289.1;Name=WP_001536289.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463042.1;locus_tag=CCO40_RS20795;product=two-component system sensor histidine kinase ZraS;protein_id=WP_001536289.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4358898 4359353 . + . ID=gene-CCO40_RS20800;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=CCO40_RS20800;old_locus_tag=CCO40_20800 NZ_CP075116.1 Protein Homology CDS 4358898 4359353 . + 0 ID=cds-WP_000828129.1;Parent=gene-CCO40_RS20800;Dbxref=GenBank:WP_000828129.1;Name=WP_000828129.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463041.1;locus_tag=CCO40_RS20800;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_000828129.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4359395 4360087 . - . ID=gene-CCO40_RS20805;Name=CCO40_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20805;old_locus_tag=CCO40_20805 NZ_CP075116.1 Protein Homology CDS 4359395 4360087 . - 0 ID=cds-WP_001083940.1;Parent=gene-CCO40_RS20805;Dbxref=GenBank:WP_001083940.1;Name=WP_001083940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463040.1;locus_tag=CCO40_RS20805;product=DUF1481 domain-containing protein;protein_id=WP_001083940.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4360099 4360371 . - . ID=gene-CCO40_RS20810;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=CCO40_RS20810;old_locus_tag=CCO40_20810 NZ_CP075116.1 Protein Homology CDS 4360099 4360371 . - 0 ID=cds-WP_001044509.1;Parent=gene-CCO40_RS20810;Dbxref=GenBank:WP_001044509.1;Name=WP_001044509.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=CCO40_RS20810;product=nucleoid-associated protein HU-alpha;protein_id=WP_001044509.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4360558 4361148 . - . ID=gene-CCO40_RS20815;Name=CCO40_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20815;old_locus_tag=CCO40_20815 NZ_CP075116.1 Protein Homology CDS 4360558 4361148 . - 0 ID=cds-WP_000940092.1;Parent=gene-CCO40_RS20815;Dbxref=GenBank:WP_000940092.1;Name=WP_000940092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463038.1;locus_tag=CCO40_RS20815;product=YjaG family protein;protein_id=WP_000940092.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4361190 4361861 . - . ID=gene-CCO40_RS20820;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=CCO40_RS20820;old_locus_tag=CCO40_20820 NZ_CP075116.1 Protein Homology CDS 4361190 4361861 . - 0 ID=cds-WP_000362359.1;Parent=gene-CCO40_RS20820;Dbxref=GenBank:WP_000362359.1;Name=WP_000362359.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463037.1;locus_tag=CCO40_RS20820;product=deoxyribonuclease V;protein_id=WP_000362359.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4361871 4362935 . - . ID=gene-CCO40_RS20825;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=CCO40_RS20825;old_locus_tag=CCO40_20825 NZ_CP075116.1 Protein Homology CDS 4361871 4362935 . - 0 ID=cds-WP_000137625.1;Parent=gene-CCO40_RS20825;Dbxref=GenBank:WP_000137625.1;Name=WP_000137625.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463036.2;locus_tag=CCO40_RS20825;product=uroporphyrinogen decarboxylase;protein_id=WP_000137625.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4362976 4363749 . - . ID=gene-CCO40_RS20830;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=CCO40_RS20830;old_locus_tag=CCO40_20830 NZ_CP075116.1 Protein Homology CDS 4362976 4363749 . - 0 ID=cds-WP_000373960.1;Parent=gene-CCO40_RS20830;Dbxref=GenBank:WP_000373960.1;Name=WP_000373960.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463035.1;locus_tag=CCO40_RS20830;product=NAD(+) diphosphatase;protein_id=WP_000373960.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4363842 4364330 . + . ID=gene-CCO40_RS20835;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=CCO40_RS20835;old_locus_tag=CCO40_20835 NZ_CP075116.1 Protein Homology CDS 4363842 4364330 . + 0 ID=cds-WP_000934315.1;Parent=gene-CCO40_RS20835;Dbxref=GenBank:WP_000934315.1;Name=WP_000934315.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463034.1;locus_tag=CCO40_RS20835;product=sigma D regulator;protein_id=WP_000934315.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4364694 4366589 . + . ID=gene-CCO40_RS20840;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=CCO40_RS20840;old_locus_tag=CCO40_20840 NZ_CP075116.1 Protein Homology CDS 4364694 4366589 . + 0 ID=cds-WP_000108414.1;Parent=gene-CCO40_RS20840;Dbxref=GenBank:WP_000108414.1;Name=WP_000108414.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463033.1;locus_tag=CCO40_RS20840;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_000108414.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4366589 4367224 . + . ID=gene-CCO40_RS20845;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=CCO40_RS20845;old_locus_tag=CCO40_20845 NZ_CP075116.1 Protein Homology CDS 4366589 4367224 . + 0 ID=cds-WP_000284629.1;Parent=gene-CCO40_RS20845;Dbxref=GenBank:WP_000284629.1;Name=WP_000284629.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463032.1;locus_tag=CCO40_RS20845;product=thiamine phosphate synthase;protein_id=WP_000284629.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4367217 4367975 . + . ID=gene-CCO40_RS20850;Name=CCO40_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20850;old_locus_tag=CCO40_20850 NZ_CP075116.1 Protein Homology CDS 4367217 4367975 . + 0 ID=cds-WP_000999771.1;Parent=gene-CCO40_RS20850;Dbxref=GenBank:WP_000999771.1;Name=WP_000999771.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463031.1;locus_tag=CCO40_RS20850;product=HesA/MoeB/ThiF family protein;protein_id=WP_000999771.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4367956 4368156 . + . ID=gene-CCO40_RS20855;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=CCO40_RS20855;old_locus_tag=CCO40_20855 NZ_CP075116.1 Protein Homology CDS 4367956 4368156 . + 0 ID=cds-WP_001166847.1;Parent=gene-CCO40_RS20855;Dbxref=GenBank:WP_001166847.1;Name=WP_001166847.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=CCO40_RS20855;product=sulfur carrier protein ThiS;protein_id=WP_001166847.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4368158 4368928 . + . ID=gene-CCO40_RS20860;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=CCO40_RS20860;old_locus_tag=CCO40_20860 NZ_CP075116.1 Protein Homology CDS 4368158 4368928 . + 0 ID=cds-WP_000944074.1;Parent=gene-CCO40_RS20860;Dbxref=GenBank:WP_000944074.1;Name=WP_000944074.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463029.1;locus_tag=CCO40_RS20860;product=thiazole synthase;protein_id=WP_000944074.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4368925 4370058 . + . ID=gene-CCO40_RS20865;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=CCO40_RS20865;old_locus_tag=CCO40_20865 NZ_CP075116.1 Protein Homology CDS 4368925 4370058 . + 0 ID=cds-WP_000847561.1;Parent=gene-CCO40_RS20865;Dbxref=GenBank:WP_000847561.1;Name=WP_000847561.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=CCO40_RS20865;product=2-iminoacetate synthase ThiH;protein_id=WP_000847561.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 4370212 4370397 . - . ID=gene-CCO40_RS20870;Name=CCO40_RS20870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS20870;old_locus_tag=CCO40_20870;partial=true;pseudo=true;start_range=.,4370212 NZ_CP075116.1 Protein Homology CDS 4370212 4370397 . - 0 ID=cds-CCO40_RS20870;Parent=gene-CCO40_RS20870;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463027.1;locus_tag=CCO40_RS20870;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4370212;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 4370380 4370487 . + . ID=gene-CCO40_RS22750;Name=CCO40_RS22750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22750;partial=true;pseudo=true;start_range=.,4370380 NZ_CP075116.1 Protein Homology CDS 4370380 4370487 . + 0 ID=cds-CCO40_RS22750;Parent=gene-CCO40_RS22750;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=CCO40_RS22750;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,4370380;transl_table=11 NZ_CP075116.1 RefSeq gene 4370810 4371154 . + . ID=gene-CCO40_RS20875;Name=CCO40_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20875;old_locus_tag=CCO40_20875 NZ_CP075116.1 Protein Homology CDS 4370810 4371154 . + 0 ID=cds-WP_023602515.1;Parent=gene-CCO40_RS20875;Dbxref=GenBank:WP_023602515.1;Name=WP_023602515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463025.1;locus_tag=CCO40_RS20875;product=hypothetical protein;protein_id=WP_023602515.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4371156 4371482 . - . ID=gene-CCO40_RS20880;Name=CCO40_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20880;old_locus_tag=CCO40_20880 NZ_CP075116.1 Protein Homology CDS 4371156 4371482 . - 0 ID=cds-WP_015675457.1;Parent=gene-CCO40_RS20880;Dbxref=GenBank:WP_015675457.1;Name=WP_015675457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015675457.1;locus_tag=CCO40_RS20880;product=hypothetical protein;protein_id=WP_015675457.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4371524 4375747 . - . ID=gene-CCO40_RS20885;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=CCO40_RS20885;old_locus_tag=CCO40_20885 NZ_CP075116.1 Protein Homology CDS 4371524 4375747 . - 0 ID=cds-WP_000653965.1;Parent=gene-CCO40_RS20885;Dbxref=GenBank:WP_000653965.1;Name=WP_000653965.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463023.1;locus_tag=CCO40_RS20885;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000653965.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4375824 4379852 . - . ID=gene-CCO40_RS20890;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=CCO40_RS20890;old_locus_tag=CCO40_20890 NZ_CP075116.1 Protein Homology CDS 4375824 4379852 . - 0 ID=cds-WP_000263105.1;Parent=gene-CCO40_RS20890;Dbxref=GenBank:WP_000263105.1;Name=WP_000263105.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=CCO40_RS20890;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000263105.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4380170 4380535 . - . ID=gene-CCO40_RS20895;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=CCO40_RS20895;old_locus_tag=CCO40_20895 NZ_CP075116.1 Protein Homology CDS 4380170 4380535 . - 0 ID=cds-WP_000028882.1;Parent=gene-CCO40_RS20895;Dbxref=GenBank:WP_000028882.1;Name=WP_000028882.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=CCO40_RS20895;product=50S ribosomal protein L7/L12;protein_id=WP_000028882.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4380602 4381099 . - . ID=gene-CCO40_RS20900;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=CCO40_RS20900;old_locus_tag=CCO40_20900 NZ_CP075116.1 Protein Homology CDS 4380602 4381099 . - 0 ID=cds-WP_001207203.1;Parent=gene-CCO40_RS20900;Dbxref=GenBank:WP_001207203.1;Name=WP_001207203.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=CCO40_RS20900;product=50S ribosomal protein L10;protein_id=WP_001207203.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4381519 4382223 . - . ID=gene-CCO40_RS20905;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=CCO40_RS20905;old_locus_tag=CCO40_20905 NZ_CP075116.1 Protein Homology CDS 4381519 4382223 . - 0 ID=cds-WP_001096676.1;Parent=gene-CCO40_RS20905;Dbxref=GenBank:WP_001096676.1;Name=WP_001096676.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463019.1;locus_tag=CCO40_RS20905;product=50S ribosomal protein L1;protein_id=WP_001096676.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4382227 4382655 . - . ID=gene-CCO40_RS20910;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=CCO40_RS20910;old_locus_tag=CCO40_20910 NZ_CP075116.1 Protein Homology CDS 4382227 4382655 . - 0 ID=cds-WP_001085926.1;Parent=gene-CCO40_RS20910;Dbxref=GenBank:WP_001085926.1;Name=WP_001085926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=CCO40_RS20910;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4382813 4383358 . - . ID=gene-CCO40_RS20915;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=CCO40_RS20915;old_locus_tag=CCO40_20915 NZ_CP075116.1 Protein Homology CDS 4382813 4383358 . - 0 ID=cds-WP_001287521.1;Parent=gene-CCO40_RS20915;Dbxref=GenBank:WP_001287521.1;Name=WP_001287521.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=CCO40_RS20915;product=transcription termination/antitermination protein NusG;protein_id=WP_001287521.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4383360 4383743 . - . ID=gene-CCO40_RS20920;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=CCO40_RS20920;old_locus_tag=CCO40_20920 NZ_CP075116.1 Protein Homology CDS 4383360 4383743 . - 0 ID=cds-WP_001275691.1;Parent=gene-CCO40_RS20920;Dbxref=GenBank:WP_001275691.1;Name=WP_001275691.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=CCO40_RS20920;product=preprotein translocase subunit SecE;protein_id=WP_001275691.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4383973 4385157 . - . ID=gene-CCO40_RS20925;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=CCO40_RS20925;old_locus_tag=CCO40_20925 NZ_CP075116.1 Protein Homology CDS 4383973 4385157 . - 0 ID=cds-WP_000031748.1-2;Parent=gene-CCO40_RS20925;Dbxref=GenBank:WP_000031748.1;Name=WP_000031748.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=CCO40_RS20925;product=elongation factor Tu;protein_id=WP_000031748.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4385273 4385348 . - . ID=gene-CCO40_RS20930;Name=CCO40_RS20930;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS20930;old_locus_tag=CCO40_20930 NZ_CP075116.1 tRNAscan-SE tRNA 4385273 4385348 . - . ID=rna-CCO40_RS20930;Parent=gene-CCO40_RS20930;anticodon=(pos:complement(4385313..4385315));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS20930;product=tRNA-Thr NZ_CP075116.1 tRNAscan-SE exon 4385273 4385348 . - . ID=exon-CCO40_RS20930-1;Parent=rna-CCO40_RS20930;anticodon=(pos:complement(4385313..4385315));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS20930;product=tRNA-Thr NZ_CP075116.1 RefSeq gene 4385355 4385429 . - . ID=gene-CCO40_RS20935;Name=CCO40_RS20935;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS20935;old_locus_tag=CCO40_20935 NZ_CP075116.1 tRNAscan-SE tRNA 4385355 4385429 . - . ID=rna-CCO40_RS20935;Parent=gene-CCO40_RS20935;anticodon=(pos:complement(4385394..4385396));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS20935;product=tRNA-Gly NZ_CP075116.1 tRNAscan-SE exon 4385355 4385429 . - . ID=exon-CCO40_RS20935-1;Parent=rna-CCO40_RS20935;anticodon=(pos:complement(4385394..4385396));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS20935;product=tRNA-Gly NZ_CP075116.1 RefSeq gene 4385546 4385630 . - . ID=gene-CCO40_RS20940;Name=CCO40_RS20940;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS20940;old_locus_tag=CCO40_20940 NZ_CP075116.1 tRNAscan-SE tRNA 4385546 4385630 . - . ID=rna-CCO40_RS20940;Parent=gene-CCO40_RS20940;anticodon=(pos:complement(4385594..4385596));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS20940;product=tRNA-Tyr NZ_CP075116.1 tRNAscan-SE exon 4385546 4385630 . - . ID=exon-CCO40_RS20940-1;Parent=rna-CCO40_RS20940;anticodon=(pos:complement(4385594..4385596));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS20940;product=tRNA-Tyr NZ_CP075116.1 RefSeq gene 4385639 4385714 . - . ID=gene-CCO40_RS20945;Name=CCO40_RS20945;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS20945;old_locus_tag=CCO40_20945 NZ_CP075116.1 tRNAscan-SE tRNA 4385639 4385714 . - . ID=rna-CCO40_RS20945;Parent=gene-CCO40_RS20945;anticodon=(pos:complement(4385679..4385681));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS20945;product=tRNA-Thr NZ_CP075116.1 tRNAscan-SE exon 4385639 4385714 . - . ID=exon-CCO40_RS20945-1;Parent=rna-CCO40_RS20945;anticodon=(pos:complement(4385679..4385681));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS20945;product=tRNA-Thr NZ_CP075116.1 RefSeq gene 4385734 4385907 . + . ID=gene-CCO40_RS20950;Name=CCO40_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS20950;old_locus_tag=CCO40_20950 NZ_CP075116.1 Protein Homology CDS 4385734 4385907 . + 0 ID=cds-WP_001541267.1;Parent=gene-CCO40_RS20950;Dbxref=GenBank:WP_001541267.1;Name=WP_001541267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=CCO40_RS20950;product=hypothetical protein;protein_id=WP_001541267.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4386116 4387066 . + . ID=gene-CCO40_RS20955;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=CCO40_RS20955;old_locus_tag=CCO40_20955 NZ_CP075116.1 Protein Homology CDS 4386116 4387066 . + 0 ID=cds-WP_000023069.1;Parent=gene-CCO40_RS20955;Dbxref=GenBank:WP_000023069.1;Name=WP_000023069.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=CCO40_RS20955;product=type I pantothenate kinase;protein_id=WP_000023069.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4387101 4388063 . - . ID=gene-CCO40_RS20960;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=CCO40_RS20960;old_locus_tag=CCO40_20960 NZ_CP075116.1 Protein Homology CDS 4387101 4388063 . - 0 ID=cds-WP_000655752.1;Parent=gene-CCO40_RS20960;Dbxref=GenBank:WP_000655752.1;Name=WP_000655752.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463012.1;locus_tag=CCO40_RS20960;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_000655752.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4388060 4389088 . - . ID=gene-CCO40_RS20965;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=CCO40_RS20965;old_locus_tag=CCO40_20965 NZ_CP075116.1 Protein Homology CDS 4388060 4389088 . - 0 ID=cds-WP_000149795.1;Parent=gene-CCO40_RS20965;Dbxref=GenBank:WP_000149795.1;Name=WP_000149795.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463011.1;locus_tag=CCO40_RS20965;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_000149795.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4389270 4389385 . - . ID=gene-CCO40_RS20970;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO40_RS20970;old_locus_tag=CCO40_20970 NZ_CP075116.1 cmsearch rRNA 4389270 4389385 . - . ID=rna-CCO40_RS20970;Parent=gene-CCO40_RS20970;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS20970;product=5S ribosomal RNA NZ_CP075116.1 cmsearch exon 4389270 4389385 . - . ID=exon-CCO40_RS20970-1;Parent=rna-CCO40_RS20970;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS20970;product=5S ribosomal RNA NZ_CP075116.1 RefSeq gene 4389583 4392574 . - . ID=gene-CCO40_RS20975;Name=CCO40_RS20975;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO40_RS20975;old_locus_tag=CCO40_20975 NZ_CP075116.1 cmsearch rRNA 4389583 4392574 . - . ID=rna-CCO40_RS20975;Parent=gene-CCO40_RS20975;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS20975;product=23S ribosomal RNA NZ_CP075116.1 cmsearch exon 4389583 4392574 . - . ID=exon-CCO40_RS20975-1;Parent=rna-CCO40_RS20975;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS20975;product=23S ribosomal RNA NZ_CP075116.1 RefSeq gene 4392755 4392830 . - . ID=gene-CCO40_RS20980;Name=CCO40_RS20980;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS20980;old_locus_tag=CCO40_20980 NZ_CP075116.1 tRNAscan-SE tRNA 4392755 4392830 . - . ID=rna-CCO40_RS20980;Parent=gene-CCO40_RS20980;anticodon=(pos:complement(4392795..4392797));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS20980;product=tRNA-Ala NZ_CP075116.1 tRNAscan-SE exon 4392755 4392830 . - . ID=exon-CCO40_RS20980-1;Parent=rna-CCO40_RS20980;anticodon=(pos:complement(4392795..4392797));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS20980;product=tRNA-Ala NZ_CP075116.1 RefSeq gene 4392942 4393018 . - . ID=gene-CCO40_RS20985;Name=CCO40_RS20985;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS20985;old_locus_tag=CCO40_20985 NZ_CP075116.1 tRNAscan-SE tRNA 4392942 4393018 . - . ID=rna-CCO40_RS20985;Parent=gene-CCO40_RS20985;anticodon=(pos:complement(4392982..4392984));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS20985;product=tRNA-Ile NZ_CP075116.1 tRNAscan-SE exon 4392942 4393018 . - . ID=exon-CCO40_RS20985-1;Parent=rna-CCO40_RS20985;anticodon=(pos:complement(4392982..4392984));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS20985;product=tRNA-Ile NZ_CP075116.1 RefSeq gene 4393088 4394629 . - . ID=gene-CCO40_RS20990;Name=CCO40_RS20990;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO40_RS20990;old_locus_tag=CCO40_20990 NZ_CP075116.1 cmsearch rRNA 4393088 4394629 . - . ID=rna-CCO40_RS20990;Parent=gene-CCO40_RS20990;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS20990;product=16S ribosomal RNA NZ_CP075116.1 cmsearch exon 4393088 4394629 . - . ID=exon-CCO40_RS20990-1;Parent=rna-CCO40_RS20990;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS20990;product=16S ribosomal RNA NZ_CP075116.1 RefSeq gene 4395009 4395860 . - . ID=gene-CCO40_RS20995;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=CCO40_RS20995;old_locus_tag=CCO40_20995 NZ_CP075116.1 Protein Homology CDS 4395009 4395860 . - 0 ID=cds-WP_000201804.1;Parent=gene-CCO40_RS20995;Dbxref=GenBank:WP_000201804.1;Name=WP_000201804.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=CCO40_RS20995;product=glutamate racemase;protein_id=WP_000201804.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4395805 4397649 . - . ID=gene-CCO40_RS21000;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=CCO40_RS21000;old_locus_tag=CCO40_21000 NZ_CP075116.1 Protein Homology CDS 4395805 4397649 . - 0 ID=cds-WP_000591405.1;Parent=gene-CCO40_RS21000;Dbxref=GenBank:WP_000591405.1;Name=WP_000591405.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463009.1;locus_tag=CCO40_RS21000;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_000591405.1;transl_table=11 NZ_CP075116.1 cmsearch riboswitch 4397716 4397908 . - . ID=id-NZ_CP075116.1:4397716..4397908;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00174,COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CP075116.1 RefSeq gene 4398023 4399123 . + . ID=gene-CCO40_RS21005;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=CCO40_RS21005;old_locus_tag=CCO40_21005 NZ_CP075116.1 Protein Homology CDS 4398023 4399123 . + 0 ID=cds-WP_000186970.1;Parent=gene-CCO40_RS21005;Dbxref=GenBank:WP_000186970.1;Name=WP_000186970.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463008.1;locus_tag=CCO40_RS21005;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_000186970.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4399170 4399529 . - . ID=gene-CCO40_RS21010;Name=CCO40_RS21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21010;old_locus_tag=CCO40_21010 NZ_CP075116.1 Protein Homology CDS 4399170 4399529 . - 0 ID=cds-WP_000813837.1;Parent=gene-CCO40_RS21010;Dbxref=GenBank:WP_000813837.1;Name=WP_000813837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463007.1;locus_tag=CCO40_RS21010;product=YijD family membrane protein;protein_id=WP_000813837.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4399545 4400180 . - . ID=gene-CCO40_RS21015;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=CCO40_RS21015;old_locus_tag=CCO40_21015 NZ_CP075116.1 Protein Homology CDS 4399545 4400180 . - 0 ID=cds-WP_000971958.1;Parent=gene-CCO40_RS21015;Dbxref=GenBank:WP_000971958.1;Name=WP_000971958.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463006.3;locus_tag=CCO40_RS21015;product=HTH-type transcriptional repressor FabR;protein_id=WP_000971958.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4400379 4401779 . + . ID=gene-CCO40_RS21020;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=CCO40_RS21020;old_locus_tag=CCO40_21020 NZ_CP075116.1 Protein Homology CDS 4400379 4401779 . + 0 ID=cds-WP_001120789.1;Parent=gene-CCO40_RS21020;Dbxref=GenBank:WP_001120789.1;Name=WP_001120789.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=CCO40_RS21020;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120789.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4401762 4402679 . - . ID=gene-CCO40_RS21025;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=CCO40_RS21025;old_locus_tag=CCO40_21025 NZ_CP075116.1 Protein Homology CDS 4401762 4402679 . - 0 ID=cds-WP_001025919.1;Parent=gene-CCO40_RS21025;Dbxref=GenBank:WP_001025919.1;Name=WP_001025919.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=CCO40_RS21025;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025919.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4402964 4404340 . - . ID=gene-CCO40_RS21030;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=CCO40_RS21030;old_locus_tag=CCO40_21030 NZ_CP075116.1 Protein Homology CDS 4402964 4404340 . - 0 ID=cds-WP_023244222.1;Parent=gene-CCO40_RS21030;Dbxref=GenBank:WP_023244222.1;Name=WP_023244222.1;Ontology_term=GO:0006526,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463003.1;locus_tag=CCO40_RS21030;product=argininosuccinate lyase;protein_id=WP_023244222.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4404458 4405234 . - . ID=gene-CCO40_RS21035;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=CCO40_RS21035;old_locus_tag=CCO40_21035 NZ_CP075116.1 Protein Homology CDS 4404458 4405234 . - 0 ID=cds-WP_001575262.1;Parent=gene-CCO40_RS21035;Dbxref=GenBank:WP_001575262.1;Name=WP_001575262.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=L-ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=CCO40_RS21035;product=acetylglutamate kinase;protein_id=WP_001575262.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4405242 4406246 . - . ID=gene-CCO40_RS21040;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=CCO40_RS21040;old_locus_tag=CCO40_21040 NZ_CP075116.1 Protein Homology CDS 4405242 4406246 . - 0 ID=cds-WP_000935335.1;Parent=gene-CCO40_RS21040;Dbxref=GenBank:WP_000935335.1;Name=WP_000935335.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase (NADP+) activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,L-ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=CCO40_RS21040;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_000935335.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4406335 4407486 . + . ID=gene-CCO40_RS21045;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=CCO40_RS21045;old_locus_tag=CCO40_21045 NZ_CP075116.1 Protein Homology CDS 4406335 4407486 . + 0 ID=cds-WP_094889312.1;Parent=gene-CCO40_RS21045;Dbxref=GenBank:WP_094889312.1;Name=WP_094889312.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463000.1;locus_tag=CCO40_RS21045;product=acetylornithine deacetylase;protein_id=WP_094889312.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4407855 4410506 . + . ID=gene-CCO40_RS21050;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=CCO40_RS21050;old_locus_tag=CCO40_21050 NZ_CP075116.1 Protein Homology CDS 4407855 4410506 . + 0 ID=cds-WP_094889311.1;Parent=gene-CCO40_RS21050;Dbxref=GenBank:WP_094889311.1;Name=WP_094889311.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=CCO40_RS21050;product=phosphoenolpyruvate carboxylase;protein_id=WP_094889311.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4410717 4412450 . + . ID=gene-CCO40_RS21055;Name=CCO40_RS21055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21055;old_locus_tag=CCO40_21055 NZ_CP075116.1 Protein Homology CDS 4410717 4412450 . + 0 ID=cds-WP_001528929.1;Parent=gene-CCO40_RS21055;Dbxref=GenBank:WP_001528929.1;Name=WP_001528929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462998.1;locus_tag=CCO40_RS21055;product=phosphoethanolamine transferase CptA;protein_id=WP_001528929.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4412611 4413447 . + . ID=gene-CCO40_RS21060;Name=CCO40_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21060;old_locus_tag=CCO40_21060 NZ_CP075116.1 Protein Homology CDS 4412611 4413447 . + 0 ID=cds-WP_053445377.1;Parent=gene-CCO40_RS21060;Dbxref=GenBank:WP_053445377.1;Name=WP_053445377.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506508.1;locus_tag=CCO40_RS21060;product=helix-turn-helix transcriptional regulator;protein_id=WP_053445377.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4413702 4414364 . + . ID=gene-CCO40_RS21065;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=CCO40_RS21065;old_locus_tag=CCO40_21065 NZ_CP075116.1 Protein Homology CDS 4413702 4414364 . + 0 ID=cds-WP_000424826.1;Parent=gene-CCO40_RS21065;Dbxref=GenBank:WP_000424826.1;Name=WP_000424826.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=CCO40_RS21065;product=fructose-6-phosphate aldolase;protein_id=WP_000424826.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4414376 4415479 . + . ID=gene-CCO40_RS21070;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=CCO40_RS21070;old_locus_tag=CCO40_21070 NZ_CP075116.1 Protein Homology CDS 4414376 4415479 . + 0 ID=cds-WP_000374041.1;Parent=gene-CCO40_RS21070;Dbxref=GenBank:WP_000374041.1;Name=WP_000374041.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=CCO40_RS21070;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_000374041.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4415738 4416361 . + . ID=gene-CCO40_RS21075;Name=CCO40_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21075;old_locus_tag=CCO40_21075 NZ_CP075116.1 Protein Homology CDS 4415738 4416361 . + 0 ID=cds-WP_000666689.1;Parent=gene-CCO40_RS21075;Dbxref=GenBank:WP_000666689.1;Name=WP_000666689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462988.1;locus_tag=CCO40_RS21075;product=DUF1287 domain-containing protein;protein_id=WP_000666689.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4416419 4418599 . - . ID=gene-CCO40_RS21080;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=CCO40_RS21080;old_locus_tag=CCO40_21080 NZ_CP075116.1 Protein Homology CDS 4416419 4418599 . - 0 ID=cds-WP_000108103.1;Parent=gene-CCO40_RS21080;Dbxref=GenBank:WP_000108103.1;Name=WP_000108103.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462987.1;locus_tag=CCO40_RS21080;product=catalase/peroxidase HPI;protein_id=WP_000108103.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4418764 4419654 . - . ID=gene-CCO40_RS21085;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=CCO40_RS21085;old_locus_tag=CCO40_21085 NZ_CP075116.1 Protein Homology CDS 4418764 4419654 . - 0 ID=cds-WP_000007507.1;Parent=gene-CCO40_RS21085;Dbxref=GenBank:WP_000007507.1;Name=WP_000007507.1;Ontology_term=GO:0071265,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase [NAD(P)H] activity|0004489||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462986.1;locus_tag=CCO40_RS21085;product=methylenetetrahydrofolate reductase;protein_id=WP_000007507.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4419849 4421405 . - . ID=gene-CCO40_RS21090;Name=CCO40_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21090;old_locus_tag=CCO40_21090 NZ_CP075116.1 Protein Homology CDS 4419849 4421405 . - 0 ID=cds-WP_080217516.1;Parent=gene-CCO40_RS21090;Dbxref=GenBank:WP_080217516.1;Name=WP_080217516.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=CCO40_RS21090;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_080217516.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4421541 4422665 . + . ID=gene-CCO40_RS21095;Name=CCO40_RS21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21095;old_locus_tag=CCO40_21095 NZ_CP075116.1 Protein Homology CDS 4421541 4422665 . + 0 ID=cds-WP_001134803.1;Parent=gene-CCO40_RS21095;Dbxref=GenBank:WP_001134803.1;Name=WP_001134803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462984.1;locus_tag=CCO40_RS21095;product=hypothetical protein;protein_id=WP_001134803.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4422900 4423898 . + . ID=gene-CCO40_RS21100;Name=CCO40_RS21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21100;old_locus_tag=CCO40_21100 NZ_CP075116.1 Protein Homology CDS 4422900 4423898 . + 0 ID=cds-WP_000406812.1;Parent=gene-CCO40_RS21100;Dbxref=GenBank:WP_000406812.1;Name=WP_000406812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406820.1;locus_tag=CCO40_RS21100;product=MFS transporter;protein_id=WP_000406812.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4423901 4424758 . + . ID=gene-CCO40_RS21105;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=CCO40_RS21105;old_locus_tag=CCO40_21105 NZ_CP075116.1 Protein Homology CDS 4423901 4424758 . + 0 ID=cds-WP_000398251.1;Parent=gene-CCO40_RS21105;Dbxref=GenBank:WP_000398251.1;Name=WP_000398251.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462983.1;locus_tag=CCO40_RS21105;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000398251.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4424874 4427306 . - . ID=gene-CCO40_RS21110;Name=CCO40_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21110;old_locus_tag=CCO40_21110 NZ_CP075116.1 Protein Homology CDS 4424874 4427306 . - 0 ID=cds-WP_000110805.1;Parent=gene-CCO40_RS21110;Dbxref=GenBank:WP_000110805.1;Name=WP_000110805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=CCO40_RS21110;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_000110805.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4427309 4428469 . - . ID=gene-CCO40_RS21115;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=CCO40_RS21115;old_locus_tag=CCO40_21115 NZ_CP075116.1 Protein Homology CDS 4427309 4428469 . - 0 ID=cds-WP_000197216.1;Parent=gene-CCO40_RS21115;Dbxref=GenBank:WP_000197216.1;Name=WP_000197216.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462981.1;locus_tag=CCO40_RS21115;product=cystathionine gamma-synthase;protein_id=WP_000197216.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4428734 4429051 . + . ID=gene-CCO40_RS21120;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=CCO40_RS21120;old_locus_tag=CCO40_21120 NZ_CP075116.1 Protein Homology CDS 4428734 4429051 . + 0 ID=cds-WP_000852811.1;Parent=gene-CCO40_RS21120;Dbxref=GenBank:WP_000852811.1;Name=WP_000852811.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=CCO40_RS21120;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852811.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4429508 4431298 . + . ID=gene-CCO40_RS21125;Name=CCO40_RS21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21125;old_locus_tag=CCO40_21125 NZ_CP075116.1 Protein Homology CDS 4429508 4431298 . + 0 ID=cds-WP_000899639.1;Parent=gene-CCO40_RS21125;Dbxref=GenBank:WP_000899639.1;Name=WP_000899639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=CCO40_RS21125;product=aryl-sulfate sulfotransferase;protein_id=WP_000899639.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4431499 4432161 . + . ID=gene-CCO40_RS21130;Name=CCO40_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21130;old_locus_tag=CCO40_21130 NZ_CP075116.1 Protein Homology CDS 4431499 4432161 . + 0 ID=cds-WP_000792797.1;Parent=gene-CCO40_RS21130;Dbxref=GenBank:WP_000792797.1;Name=WP_000792797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462978.1;locus_tag=CCO40_RS21130;product=TIGR02117 family protein;protein_id=WP_000792797.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4432206 4432418 . - . ID=gene-CCO40_RS21135;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=CCO40_RS21135;old_locus_tag=CCO40_21135 NZ_CP075116.1 Protein Homology CDS 4432206 4432418 . - 0 ID=cds-WP_000715284.1;Parent=gene-CCO40_RS21135;Dbxref=GenBank:WP_000715284.1;Name=WP_000715284.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462977.1;locus_tag=CCO40_RS21135;product=50S ribosomal protein L31;protein_id=WP_000715284.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4432622 4434820 . + . ID=gene-CCO40_RS21140;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=CCO40_RS21140;old_locus_tag=CCO40_21140 NZ_CP075116.1 Protein Homology CDS 4432622 4434820 . + 0 ID=cds-WP_000109397.1;Parent=gene-CCO40_RS21140;Dbxref=GenBank:WP_000109397.1;Name=WP_000109397.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=CCO40_RS21140;product=primosomal protein N';protein_id=WP_000109397.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4434975 4436000 . + . ID=gene-CCO40_RS21145;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=CCO40_RS21145;old_locus_tag=CCO40_21145 NZ_CP075116.1 Protein Homology CDS 4434975 4436000 . + 0 ID=cds-WP_000841337.1;Parent=gene-CCO40_RS21145;Dbxref=GenBank:WP_000841337.1;Name=WP_000841337.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462975.1;locus_tag=CCO40_RS21145;product=DNA-binding transcriptional regulator CytR;protein_id=WP_000841337.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4436094 4437083 . + . ID=gene-CCO40_RS21150;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=CCO40_RS21150;old_locus_tag=CCO40_21150 NZ_CP075116.1 Protein Homology CDS 4436094 4437083 . + 0 ID=cds-WP_063874664.1;Parent=gene-CCO40_RS21150;Dbxref=GenBank:WP_063874664.1;Name=WP_063874664.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462974.1;locus_tag=CCO40_RS21150;product=cell division protein FtsN;protein_id=WP_063874664.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4437175 4437705 . + . ID=gene-CCO40_RS21155;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=CCO40_RS21155;old_locus_tag=CCO40_21155 NZ_CP075116.1 Protein Homology CDS 4437175 4437705 . + 0 ID=cds-WP_000208240.1;Parent=gene-CCO40_RS21155;Dbxref=GenBank:WP_000208240.1;Name=WP_000208240.1;Ontology_term=GO:0030163,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462973.1;locus_tag=CCO40_RS21155;product=ATP-dependent protease subunit HslV;protein_id=WP_000208240.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4437715 4439046 . + . ID=gene-CCO40_RS21160;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=CCO40_RS21160;old_locus_tag=CCO40_21160 NZ_CP075116.1 Protein Homology CDS 4437715 4439046 . + 0 ID=cds-WP_001293360.1;Parent=gene-CCO40_RS21160;Dbxref=GenBank:WP_001293360.1;Name=WP_001293360.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=CCO40_RS21160;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_001293360.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4439113 4440042 . + . ID=gene-CCO40_RS21165;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=CCO40_RS21165;old_locus_tag=CCO40_21165 NZ_CP075116.1 Protein Homology CDS 4439113 4440042 . + 0 ID=cds-WP_000139639.1;Parent=gene-CCO40_RS21165;Dbxref=GenBank:WP_000139639.1;Name=WP_000139639.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462971.1;locus_tag=CCO40_RS21165;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_000139639.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4440135 4440620 . + . ID=gene-CCO40_RS21170;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=CCO40_RS21170;old_locus_tag=CCO40_21170 NZ_CP075116.1 Protein Homology CDS 4440135 4440620 . + 0 ID=cds-WP_000872918.1;Parent=gene-CCO40_RS21170;Dbxref=GenBank:WP_000872918.1;Name=WP_000872918.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=CCO40_RS21170;product=ribonuclease E activity regulator RraA;protein_id=WP_000872918.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4440842 4441081 . - . ID=gene-CCO40_RS21175;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=CCO40_RS21175;old_locus_tag=CCO40_21175 NZ_CP075116.1 Protein Homology CDS 4440842 4441081 . - 0 ID=cds-WP_000051370.1;Parent=gene-CCO40_RS21175;Dbxref=GenBank:WP_000051370.1;Name=WP_000051370.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229475.1;locus_tag=CCO40_RS21175;product=septal ring assembly protein ZapB;protein_id=WP_000051370.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4441480 4442325 . + . ID=gene-CCO40_RS21180;Name=CCO40_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21180;old_locus_tag=CCO40_21180 NZ_CP075116.1 Protein Homology CDS 4441480 4442325 . + 0 ID=cds-WP_000084287.1;Parent=gene-CCO40_RS21180;Dbxref=GenBank:WP_000084287.1;Name=WP_000084287.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462968.1;locus_tag=CCO40_RS21180;product=MIP/aquaporin family protein;protein_id=WP_000084287.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4442346 4443854 . + . ID=gene-CCO40_RS21185;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=CCO40_RS21185;old_locus_tag=CCO40_21185 NZ_CP075116.1 Protein Homology CDS 4442346 4443854 . + 0 ID=cds-WP_000136809.1;Parent=gene-CCO40_RS21185;Dbxref=GenBank:WP_000136809.1;Name=WP_000136809.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462967.1;locus_tag=CCO40_RS21185;product=glycerol kinase GlpK;protein_id=WP_000136809.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4443966 4444976 . + . ID=gene-CCO40_RS21190;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=CCO40_RS21190;old_locus_tag=CCO40_21190 NZ_CP075116.1 Protein Homology CDS 4443966 4444976 . + 0 ID=cds-WP_001250617.1;Parent=gene-CCO40_RS21190;Dbxref=GenBank:WP_001250617.1;Name=WP_001250617.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=CCO40_RS21190;product=class II fructose-bisphosphatase;protein_id=WP_001250617.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4445073 4445819 . + . ID=gene-CCO40_RS21195;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=CCO40_RS21195;old_locus_tag=CCO40_21195 NZ_CP075116.1 Protein Homology CDS 4445073 4445819 . + 0 ID=cds-WP_000796303.1;Parent=gene-CCO40_RS21195;Dbxref=GenBank:WP_000796303.1;Name=WP_000796303.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462965.1;locus_tag=CCO40_RS21195;product=ferredoxin--NADP(+) reductase;protein_id=WP_000796303.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4445925 4446353 . - . ID=gene-CCO40_RS21200;Name=CCO40_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21200;old_locus_tag=CCO40_21200 NZ_CP075116.1 Protein Homology CDS 4445925 4446353 . - 0 ID=cds-WP_000155237.1;Parent=gene-CCO40_RS21200;Dbxref=GenBank:WP_000155237.1;Name=WP_000155237.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462964.1;locus_tag=CCO40_RS21200;product=DUF805 domain-containing protein;protein_id=WP_000155237.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4446454 4447050 . + . ID=gene-CCO40_RS21205;Name=CCO40_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21205;old_locus_tag=CCO40_21205 NZ_CP075116.1 Protein Homology CDS 4446454 4447050 . + 0 ID=cds-WP_000802242.1;Parent=gene-CCO40_RS21205;Dbxref=GenBank:WP_000802242.1;Name=WP_000802242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462963.1;locus_tag=CCO40_RS21205;product=YiiQ family protein;protein_id=WP_000802242.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4447163 4447930 . + . ID=gene-CCO40_RS21210;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=CCO40_RS21210;old_locus_tag=CCO40_21210 NZ_CP075116.1 Protein Homology CDS 4447163 4447930 . + 0 ID=cds-WP_094889310.1;Parent=gene-CCO40_RS21210;Dbxref=GenBank:WP_094889310.1;Name=WP_094889310.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462962.1;locus_tag=CCO40_RS21210;product=triose-phosphate isomerase;protein_id=WP_094889310.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4448022 4448786 . - . ID=gene-CCO40_RS21215;Name=CCO40_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21215;old_locus_tag=CCO40_21215 NZ_CP075116.1 Protein Homology CDS 4448022 4448786 . - 0 ID=cds-WP_001088046.1;Parent=gene-CCO40_RS21215;Dbxref=GenBank:WP_001088046.1;Name=WP_001088046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462961.1;locus_tag=CCO40_RS21215;product=beta/alpha barrel domain-containing protein;protein_id=WP_001088046.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4448796 4449086 . - . ID=gene-CCO40_RS21220;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=CCO40_RS21220;old_locus_tag=CCO40_21220 NZ_CP075116.1 Protein Homology CDS 4448796 4449086 . - 0 ID=cds-WP_001543603.1;Parent=gene-CCO40_RS21220;Dbxref=GenBank:WP_001543603.1;Name=WP_001543603.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=CCO40_RS21220;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_001543603.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4449169 4450044 . - . ID=gene-CCO40_RS21225;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=CCO40_RS21225;old_locus_tag=CCO40_21225 NZ_CP075116.1 Protein Homology CDS 4449169 4450044 . - 0 ID=cds-WP_000774146.1;Parent=gene-CCO40_RS21225;Dbxref=GenBank:WP_000774146.1;Name=WP_000774146.1;gbkey=CDS;gene=lsrF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774144.1;locus_tag=CCO40_RS21225;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase LsrF;protein_id=WP_000774146.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4450073 4451095 . - . ID=gene-CCO40_RS21230;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=CCO40_RS21230;old_locus_tag=CCO40_21230 NZ_CP075116.1 Protein Homology CDS 4450073 4451095 . - 0 ID=cds-WP_000090737.1;Parent=gene-CCO40_RS21230;Dbxref=GenBank:WP_000090737.1;Name=WP_000090737.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462958.1;locus_tag=CCO40_RS21230;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_000090737.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4451124 4452125 . - . ID=gene-CCO40_RS21235;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=CCO40_RS21235;old_locus_tag=CCO40_21235 NZ_CP075116.1 Protein Homology CDS 4451124 4452125 . - 0 ID=cds-WP_000981826.1;Parent=gene-CCO40_RS21235;Dbxref=GenBank:WP_000981826.1;Name=WP_000981826.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462957.1;locus_tag=CCO40_RS21235;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_000981826.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4452122 4453165 . - . ID=gene-CCO40_RS21240;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=CCO40_RS21240;old_locus_tag=CCO40_21240 NZ_CP075116.1 Protein Homology CDS 4452122 4453165 . - 0 ID=cds-WP_000911134.1;Parent=gene-CCO40_RS21240;Dbxref=GenBank:WP_000911134.1;Name=WP_000911134.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462956.1;locus_tag=CCO40_RS21240;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_000911134.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4453159 4454694 . - . ID=gene-CCO40_RS21245;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=CCO40_RS21245;old_locus_tag=CCO40_21245 NZ_CP075116.1 Protein Homology CDS 4453159 4454694 . - 0 ID=cds-WP_001167250.1;Parent=gene-CCO40_RS21245;Dbxref=GenBank:WP_001167250.1;Name=WP_001167250.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462955.1;locus_tag=CCO40_RS21245;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_001167250.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4454950 4455909 . + . ID=gene-CCO40_RS21250;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=CCO40_RS21250;old_locus_tag=CCO40_21250 NZ_CP075116.1 Protein Homology CDS 4454950 4455909 . + 0 ID=cds-WP_001283048.1;Parent=gene-CCO40_RS21250;Dbxref=GenBank:WP_001283048.1;Name=WP_001283048.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462954.1;locus_tag=CCO40_RS21250;product=transcriptional regulator LsrR;protein_id=WP_001283048.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4455997 4457589 . + . ID=gene-CCO40_RS21255;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=CCO40_RS21255;old_locus_tag=CCO40_21255 NZ_CP075116.1 Protein Homology CDS 4455997 4457589 . + 0 ID=cds-WP_000113085.1;Parent=gene-CCO40_RS21255;Dbxref=GenBank:WP_000113085.1;Name=WP_000113085.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462953.1;locus_tag=CCO40_RS21255;product=autoinducer-2 kinase;protein_id=WP_000113085.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4457603 4457953 . + . ID=gene-CCO40_RS21260;Name=CCO40_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21260;old_locus_tag=CCO40_21260 NZ_CP075116.1 Protein Homology CDS 4457603 4457953 . + 0 ID=cds-WP_001173080.1;Parent=gene-CCO40_RS21260;Dbxref=GenBank:WP_001173080.1;Name=WP_001173080.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742380.1;locus_tag=CCO40_RS21260;product=cupin domain-containing protein;protein_id=WP_001173080.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 4458043 4458183 . - . ID=gene-CCO40_RS21265;Name=CCO40_RS21265;end_range=4458183,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS21265;old_locus_tag=CCO40_21265;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 4458043 4458183 . - 0 ID=cds-CCO40_RS21265;Parent=gene-CCO40_RS21265;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008654,GO:0008715,GO:0016020;end_range=4458183,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=CCO40_RS21265;partial=true;product=CDP-diacylglycerol diphosphatase;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 4458229 4458354 . - . ID=gene-CCO40_RS21270;Name=CCO40_RS21270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS21270;old_locus_tag=CCO40_21270;partial=true;pseudo=true;start_range=.,4458229 NZ_CP075116.1 Protein Homology CDS 4458229 4458354 . - 0 ID=cds-CCO40_RS21270;Parent=gene-CCO40_RS21270;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229472.1;locus_tag=CCO40_RS21270;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4458229;transl_table=11 NZ_CP075116.1 RefSeq gene 4458452 4459174 . - . ID=gene-CCO40_RS21275;Name=CCO40_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21275;old_locus_tag=CCO40_21275 NZ_CP075116.1 Protein Homology CDS 4458452 4459174 . - 0 ID=cds-WP_001528882.1;Parent=gene-CCO40_RS21275;Dbxref=GenBank:WP_001528882.1;Name=WP_001528882.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462949.1;locus_tag=CCO40_RS21275;product=GntR family transcriptional regulator;protein_id=WP_001528882.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4459237 4460277 . - . ID=gene-CCO40_RS21280;Name=CCO40_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21280;old_locus_tag=CCO40_21280 NZ_CP075116.1 Protein Homology CDS 4459237 4460277 . - 0 ID=cds-WP_000557888.1;Parent=gene-CCO40_RS21280;Dbxref=GenBank:WP_000557888.1;Name=WP_000557888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462948.1;locus_tag=CCO40_RS21280;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000557888.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4460287 4461246 . - . ID=gene-CCO40_RS21285;Name=CCO40_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21285;old_locus_tag=CCO40_21285 NZ_CP075116.1 Protein Homology CDS 4460287 4461246 . - 0 ID=cds-WP_000646499.1;Parent=gene-CCO40_RS21285;Dbxref=GenBank:WP_000646499.1;Name=WP_000646499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462947.1;locus_tag=CCO40_RS21285;product=aminoimidazole riboside kinase;protein_id=WP_000646499.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4461257 4462591 . - . ID=gene-CCO40_RS21290;Name=CCO40_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21290;old_locus_tag=CCO40_21290 NZ_CP075116.1 Protein Homology CDS 4461257 4462591 . - 0 ID=cds-WP_000777317.1;Parent=gene-CCO40_RS21290;Dbxref=GenBank:WP_000777317.1;Name=WP_000777317.1;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=CCO40_RS21290;product=MFS transporter;protein_id=WP_000777317.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4462856 4463611 . - . ID=gene-CCO40_RS21295;Name=CCO40_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21295;old_locus_tag=CCO40_21295 NZ_CP075116.1 Protein Homology CDS 4462856 4463611 . - 0 ID=cds-WP_000750754.1;Parent=gene-CCO40_RS21295;Dbxref=GenBank:WP_000750754.1;Name=WP_000750754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=CCO40_RS21295;product=CDP-diacylglycerol diphosphatase;protein_id=WP_000750754.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4463712 4464701 . - . ID=gene-CCO40_RS21300;Name=CCO40_RS21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21300;old_locus_tag=CCO40_21300 NZ_CP075116.1 Protein Homology CDS 4463712 4464701 . - 0 ID=cds-WP_000758717.1;Parent=gene-CCO40_RS21300;Dbxref=GenBank:WP_000758717.1;Name=WP_000758717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=CCO40_RS21300;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_000758717.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4464905 4465867 . - . ID=gene-CCO40_RS21305;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=CCO40_RS21305;old_locus_tag=CCO40_21305 NZ_CP075116.1 Protein Homology CDS 4464905 4465867 . - 0 ID=cds-WP_000591793.1;Parent=gene-CCO40_RS21305;Dbxref=GenBank:WP_000591793.1;Name=WP_000591793.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=CCO40_RS21305;product=6-phosphofructokinase;protein_id=WP_000591793.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4466052 4466954 . - . ID=gene-CCO40_RS21310;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=CCO40_RS21310;old_locus_tag=CCO40_21310 NZ_CP075116.1 Protein Homology CDS 4466052 4466954 . - 0 ID=cds-WP_001077321.1;Parent=gene-CCO40_RS21310;Dbxref=GenBank:WP_001077321.1;Name=WP_001077321.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0030001,GO:0055085,GO:0008324,GO:0046873,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal ion transmembrane transporter activity|0046873||IEA;go_process=monoatomic cation transport|0006812||IEA,metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462942.1;locus_tag=CCO40_RS21310;product=CDF family cation-efflux transporter FieF;protein_id=WP_001077321.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4467102 4467602 . - . ID=gene-CCO40_RS21315;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=CCO40_RS21315;old_locus_tag=CCO40_21315 NZ_CP075116.1 Protein Homology CDS 4467102 4467602 . - 0 ID=cds-WP_001233463.1;Parent=gene-CCO40_RS21315;Dbxref=GenBank:WP_001233463.1;Name=WP_001233463.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462941.1;locus_tag=CCO40_RS21315;product=cell-envelope stress modulator CpxP;protein_id=WP_001233463.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4467753 4468451 . + . ID=gene-CCO40_RS21320;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=CCO40_RS21320;old_locus_tag=CCO40_21320 NZ_CP075116.1 Protein Homology CDS 4467753 4468451 . + 0 ID=cds-WP_001033731.1;Parent=gene-CCO40_RS21320;Dbxref=GenBank:WP_001033731.1;Name=WP_001033731.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=CCO40_RS21320;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033731.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4468448 4469821 . + . ID=gene-CCO40_RS21325;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=CCO40_RS21325;old_locus_tag=CCO40_21325 NZ_CP075116.1 Protein Homology CDS 4468448 4469821 . + 0 ID=cds-WP_000580402.1;Parent=gene-CCO40_RS21325;Dbxref=GenBank:WP_000580402.1;Name=WP_000580402.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=CCO40_RS21325;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_000580402.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4469872 4470267 . - . ID=gene-CCO40_RS21330;Name=CCO40_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21330;old_locus_tag=CCO40_21330 NZ_CP075116.1 Protein Homology CDS 4469872 4470267 . - 0 ID=cds-WP_000133442.1;Parent=gene-CCO40_RS21330;Dbxref=GenBank:WP_000133442.1;Name=WP_000133442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462938.1;locus_tag=CCO40_RS21330;product=nuclear transport factor 2 family protein;protein_id=WP_000133442.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4470279 4470968 . - . ID=gene-CCO40_RS21335;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=CCO40_RS21335;old_locus_tag=CCO40_21335 NZ_CP075116.1 Protein Homology CDS 4470279 4470968 . - 0 ID=cds-WP_000559229.1;Parent=gene-CCO40_RS21335;Dbxref=GenBank:WP_000559229.1;Name=WP_000559229.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559227.1;locus_tag=CCO40_RS21335;product=6-hydroxyaminopurine reductase;protein_id=WP_000559229.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4471038 4471658 . - . ID=gene-CCO40_RS21340;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=CCO40_RS21340;old_locus_tag=CCO40_21340 NZ_CP075116.1 Protein Homology CDS 4471038 4471658 . - 0 ID=cds-WP_000122632.1;Parent=gene-CCO40_RS21340;Dbxref=GenBank:WP_000122632.1;Name=WP_000122632.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=CCO40_RS21340;product=superoxide dismutase [Mn];protein_id=WP_000122632.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4471987 4472970 . + . ID=gene-CCO40_RS21345;Name=CCO40_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21345;old_locus_tag=CCO40_21345 NZ_CP075116.1 Protein Homology CDS 4471987 4472970 . + 0 ID=cds-WP_064047275.1;Parent=gene-CCO40_RS21345;Dbxref=GenBank:WP_064047275.1;Name=WP_064047275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=CCO40_RS21345;product=TRAP transporter substrate-binding protein;protein_id=WP_064047275.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4472989 4473504 . + . ID=gene-CCO40_RS21350;Name=CCO40_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21350;old_locus_tag=CCO40_21350 NZ_CP075116.1 Protein Homology CDS 4472989 4473504 . + 0 ID=cds-WP_001091413.1;Parent=gene-CCO40_RS21350;Dbxref=GenBank:WP_001091413.1;Name=WP_001091413.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462934.1;locus_tag=CCO40_RS21350;product=TRAP transporter small permease;protein_id=WP_001091413.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4473497 4474804 . + . ID=gene-CCO40_RS21355;Name=CCO40_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21355;old_locus_tag=CCO40_21355 NZ_CP075116.1 Protein Homology CDS 4473497 4474804 . + 0 ID=cds-WP_000566800.1;Parent=gene-CCO40_RS21355;Dbxref=GenBank:WP_000566800.1;Name=WP_000566800.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462933.1;locus_tag=CCO40_RS21355;product=TRAP transporter large permease;protein_id=WP_000566800.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4474961 4475644 . - . ID=gene-CCO40_RS21360;Name=CCO40_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21360;old_locus_tag=CCO40_21360 NZ_CP075116.1 Protein Homology CDS 4474961 4475644 . - 0 ID=cds-WP_094889309.1;Parent=gene-CCO40_RS21360;Dbxref=GenBank:WP_094889309.1;Name=WP_094889309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462932.3;locus_tag=CCO40_RS21360;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_094889309.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4476263 4477297 . + . ID=gene-CCO40_RS21365;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=CCO40_RS21365;old_locus_tag=CCO40_21365 NZ_CP075116.1 Protein Homology CDS 4476263 4477297 . + 0 ID=cds-WP_000063541.1;Parent=gene-CCO40_RS21365;Dbxref=GenBank:WP_000063541.1;Name=WP_000063541.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=CCO40_RS21365;product=L-rhamnose/proton symporter RhaT;protein_id=WP_000063541.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4477294 4478142 . - . ID=gene-CCO40_RS21370;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=CCO40_RS21370;old_locus_tag=CCO40_21370 NZ_CP075116.1 Protein Homology CDS 4477294 4478142 . - 0 ID=cds-WP_000013290.1;Parent=gene-CCO40_RS21370;Dbxref=GenBank:WP_000013290.1;Name=WP_000013290.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462930.1;locus_tag=CCO40_RS21370;product=HTH-type transcriptional activator RhaR;protein_id=WP_000013290.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4478295 4479131 . - . ID=gene-CCO40_RS21375;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=CCO40_RS21375;old_locus_tag=CCO40_21375 NZ_CP075116.1 Protein Homology CDS 4478295 4479131 . - 0 ID=cds-WP_094889308.1;Parent=gene-CCO40_RS21375;Dbxref=GenBank:WP_094889308.1;Name=WP_094889308.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462929.1;locus_tag=CCO40_RS21375;product=HTH-type transcriptional activator RhaS;protein_id=WP_094889308.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4479419 4480888 . + . ID=gene-CCO40_RS21380;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=CCO40_RS21380;old_locus_tag=CCO40_21380 NZ_CP075116.1 Protein Homology CDS 4479419 4480888 . + 0 ID=cds-WP_000143959.1;Parent=gene-CCO40_RS21380;Dbxref=GenBank:WP_000143959.1;Name=WP_000143959.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=CCO40_RS21380;product=rhamnulokinase;protein_id=WP_000143959.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4480885 4482144 . + . ID=gene-CCO40_RS21385;Name=CCO40_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21385;old_locus_tag=CCO40_21385 NZ_CP075116.1 Protein Homology CDS 4480885 4482144 . + 0 ID=cds-WP_000211469.1;Parent=gene-CCO40_RS21385;Dbxref=GenBank:WP_000211469.1;Name=WP_000211469.1;Ontology_term=GO:0019318,GO:0008740,GO:0030145;gbkey=CDS;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=hexose metabolic process|0019318||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462927.1;locus_tag=CCO40_RS21385;product=L-rhamnose isomerase;protein_id=WP_000211469.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4482287 4483114 . + . ID=gene-CCO40_RS21390;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=CCO40_RS21390;old_locus_tag=CCO40_21390 NZ_CP075116.1 Protein Homology CDS 4482287 4483114 . + 0 ID=cds-WP_001179685.1;Parent=gene-CCO40_RS21390;Dbxref=GenBank:WP_001179685.1;Name=WP_001179685.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=CCO40_RS21390;product=rhamnulose-1-phosphate aldolase;protein_id=WP_001179685.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4483241 4484389 . + . ID=gene-CCO40_RS21395;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=CCO40_RS21395;old_locus_tag=CCO40_21395 NZ_CP075116.1 Protein Homology CDS 4483241 4484389 . + 0 ID=cds-WP_000009249.1;Parent=gene-CCO40_RS21395;Dbxref=GenBank:WP_000009249.1;Name=WP_000009249.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462925.1;locus_tag=CCO40_RS21395;product=lactaldehyde reductase;protein_id=WP_000009249.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4484386 4484700 . + . ID=gene-CCO40_RS21400;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=CCO40_RS21400;old_locus_tag=CCO40_21400 NZ_CP075116.1 Protein Homology CDS 4484386 4484700 . + 0 ID=cds-WP_000619478.1;Parent=gene-CCO40_RS21400;Dbxref=GenBank:WP_000619478.1;Name=WP_000619478.1;Ontology_term=GO:0019318,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=hexose metabolic process|0019318||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=CCO40_RS21400;product=L-rhamnose mutarotase;protein_id=WP_000619478.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4484789 4485337 . - . ID=gene-CCO40_RS21405;Name=CCO40_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21405;old_locus_tag=CCO40_21405 NZ_CP075116.1 Protein Homology CDS 4484789 4485337 . - 0 ID=cds-WP_001517951.1;Parent=gene-CCO40_RS21405;Dbxref=GenBank:WP_001517951.1;Name=WP_001517951.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=CCO40_RS21405;product=helix-turn-helix domain-containing protein;protein_id=WP_001517951.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4485438 4486097 . + . ID=gene-CCO40_RS21410;Name=CCO40_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21410;old_locus_tag=CCO40_21410 NZ_CP075116.1 Protein Homology CDS 4485438 4486097 . + 0 ID=cds-WP_000683586.1;Parent=gene-CCO40_RS21410;Dbxref=GenBank:WP_000683586.1;Name=WP_000683586.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462922.1;locus_tag=CCO40_RS21410;product=AzlC family ABC transporter permease;protein_id=WP_000683586.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4486097 4486420 . + . ID=gene-CCO40_RS21415;Name=CCO40_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21415;old_locus_tag=CCO40_21415 NZ_CP075116.1 Protein Homology CDS 4486097 4486420 . + 0 ID=cds-WP_000527677.1;Parent=gene-CCO40_RS21415;Dbxref=GenBank:WP_000527677.1;Name=WP_000527677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=CCO40_RS21415;product=AzlD domain-containing protein;protein_id=WP_000527677.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4486775 4487875 . - . ID=gene-CCO40_RS21420;Name=CCO40_RS21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21420;old_locus_tag=CCO40_21420 NZ_CP075116.1 Protein Homology CDS 4486775 4487875 . - 0 ID=cds-WP_000828048.1;Parent=gene-CCO40_RS21420;Dbxref=GenBank:WP_000828048.1;Name=WP_000828048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828052.1;locus_tag=CCO40_RS21420;product=YiiG family protein;protein_id=WP_000828048.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4488058 4489089 . + . ID=gene-CCO40_RS21425;Name=CCO40_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21425;old_locus_tag=CCO40_21425 NZ_CP075116.1 Protein Homology CDS 4488058 4489089 . + 0 ID=cds-WP_000710969.1;Parent=gene-CCO40_RS21425;Dbxref=GenBank:WP_000710969.1;Name=WP_000710969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462919.1;locus_tag=CCO40_RS21425;product=YiiG family protein;protein_id=WP_000710969.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4489357 4490193 . - . ID=gene-CCO40_RS21430;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=CCO40_RS21430;old_locus_tag=CCO40_21430 NZ_CP075116.1 Protein Homology CDS 4489357 4490193 . - 0 ID=cds-WP_001059739.1;Parent=gene-CCO40_RS21430;Dbxref=GenBank:WP_001059739.1;Name=WP_001059739.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=CCO40_RS21430;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_001059739.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4490388 4493438 . + . ID=gene-CCO40_RS21435;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=CCO40_RS21435;old_locus_tag=CCO40_21435 NZ_CP075116.1 Protein Homology CDS 4490388 4493438 . + 0 ID=cds-WP_077248424.1;Parent=gene-CCO40_RS21435;Dbxref=GenBank:WP_077248424.1;Name=WP_077248424.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=CCO40_RS21435;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077248424.1;transl_except=(pos:4490973..4490975%2Caa:Sec);transl_table=11 NZ_CP075116.1 RefSeq gene 4493451 4494353 . + . ID=gene-CCO40_RS21440;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=CCO40_RS21440;old_locus_tag=CCO40_21440 NZ_CP075116.1 Protein Homology CDS 4493451 4494353 . + 0 ID=cds-WP_000331364.1;Parent=gene-CCO40_RS21440;Dbxref=GenBank:WP_000331364.1;Name=WP_000331364.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=CCO40_RS21440;product=formate dehydrogenase subunit beta;protein_id=WP_000331364.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4494350 4494985 . + . ID=gene-CCO40_RS21445;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=CCO40_RS21445;old_locus_tag=CCO40_21445 NZ_CP075116.1 Protein Homology CDS 4494350 4494985 . + 0 ID=cds-WP_000829025.1;Parent=gene-CCO40_RS21445;Dbxref=GenBank:WP_000829025.1;Name=WP_000829025.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462915.1;locus_tag=CCO40_RS21445;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829025.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4494982 4495911 . + . ID=gene-CCO40_RS21450;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=CCO40_RS21450;old_locus_tag=CCO40_21450 NZ_CP075116.1 Protein Homology CDS 4494982 4495911 . + 0 ID=cds-WP_000027730.1;Parent=gene-CCO40_RS21450;Dbxref=GenBank:WP_000027730.1;Name=WP_000027730.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=CCO40_RS21450;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_000027730.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4495958 4496248 . - . ID=gene-CCO40_RS21455;Name=CCO40_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21455;old_locus_tag=CCO40_21455 NZ_CP075116.1 Protein Homology CDS 4495958 4496248 . - 0 ID=cds-WP_000362050.1;Parent=gene-CCO40_RS21455;Dbxref=GenBank:WP_000362050.1;Name=WP_000362050.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264433.1;locus_tag=CCO40_RS21455;product=helix-turn-helix domain-containing protein;protein_id=WP_000362050.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4496249 4496560 . - . ID=gene-CCO40_RS21460;Name=CCO40_RS21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21460;old_locus_tag=CCO40_21460 NZ_CP075116.1 Protein Homology CDS 4496249 4496560 . - 0 ID=cds-WP_001159630.1;Parent=gene-CCO40_RS21460;Dbxref=GenBank:WP_001159630.1;Name=WP_001159630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001159636.1;locus_tag=CCO40_RS21460;product=cytotoxic translational repressor of toxin-antitoxin stability system;protein_id=WP_001159630.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4496778 4497707 . + . ID=gene-CCO40_RS21465;Name=CCO40_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21465;old_locus_tag=CCO40_21465 NZ_CP075116.1 Protein Homology CDS 4496778 4497707 . + 0 ID=cds-WP_001127703.1;Parent=gene-CCO40_RS21465;Dbxref=GenBank:WP_001127703.1;Name=WP_001127703.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462912.1;locus_tag=CCO40_RS21465;product=alpha/beta hydrolase;protein_id=WP_001127703.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4497793 4498104 . + . ID=gene-CCO40_RS21470;Name=CCO40_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21470;old_locus_tag=CCO40_21470 NZ_CP075116.1 Protein Homology CDS 4497793 4498104 . + 0 ID=cds-WP_017465947.1;Parent=gene-CCO40_RS21470;Dbxref=GenBank:WP_017465947.1;Name=WP_017465947.1;Ontology_term=GO:0003723,GO:0004519,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA binding|0003723||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462911.1;locus_tag=CCO40_RS21470;product=type II toxin-antitoxin system HigB family toxin;protein_id=WP_017465947.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4498101 4498547 . + . ID=gene-CCO40_RS21475;Name=CCO40_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21475;old_locus_tag=CCO40_21475 NZ_CP075116.1 Protein Homology CDS 4498101 4498547 . + 0 ID=cds-WP_017465948.1;Parent=gene-CCO40_RS21475;Dbxref=GenBank:WP_017465948.1;Name=WP_017465948.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462910.3;locus_tag=CCO40_RS21475;product=helix-turn-helix domain-containing protein;protein_id=WP_017465948.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4498562 4499503 . - . ID=gene-CCO40_RS21480;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=CCO40_RS21480;old_locus_tag=CCO40_21480 NZ_CP075116.1 Protein Homology CDS 4498562 4499503 . - 0 ID=cds-WP_001518251.1;Parent=gene-CCO40_RS21480;Dbxref=GenBank:WP_001518251.1;Name=WP_001518251.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=CCO40_RS21480;product=fatty acid biosynthesis protein FabY;protein_id=WP_001518251.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4499548 4499985 . - . ID=gene-CCO40_RS21485;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=CCO40_RS21485;old_locus_tag=CCO40_21485 NZ_CP075116.1 Protein Homology CDS 4499548 4499985 . - 0 ID=cds-WP_000560969.1;Parent=gene-CCO40_RS21485;Dbxref=GenBank:WP_000560969.1;Name=WP_000560969.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=CCO40_RS21485;product=D-aminoacyl-tRNA deacylase;protein_id=WP_000560969.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4499982 4500854 . - . ID=gene-CCO40_RS21490;Name=CCO40_RS21490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21490;old_locus_tag=CCO40_21490 NZ_CP075116.1 Protein Homology CDS 4499982 4500854 . - 0 ID=cds-WP_000921423.1;Parent=gene-CCO40_RS21490;Dbxref=GenBank:WP_000921423.1;Name=WP_000921423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462907.1;locus_tag=CCO40_RS21490;product=virulence factor BrkB family protein;protein_id=WP_000921423.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4500848 4501447 . - . ID=gene-CCO40_RS21495;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=CCO40_RS21495;old_locus_tag=CCO40_21495 NZ_CP075116.1 Protein Homology CDS 4500848 4501447 . - 0 ID=cds-WP_000965695.1;Parent=gene-CCO40_RS21495;Dbxref=GenBank:WP_000965695.1;Name=WP_000965695.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462906.1;locus_tag=CCO40_RS21495;product=glucose-1-phosphatase;protein_id=WP_000965695.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4501638 4502441 . - . ID=gene-CCO40_RS21500;Name=CCO40_RS21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21500;old_locus_tag=CCO40_21500 NZ_CP075116.1 Protein Homology CDS 4501638 4502441 . - 0 ID=cds-WP_001728053.1;Parent=gene-CCO40_RS21500;Dbxref=GenBank:WP_001728053.1;Name=WP_001728053.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462905.1;locus_tag=CCO40_RS21500;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001728053.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4502475 4503371 . - . ID=gene-CCO40_RS21505;Name=CCO40_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21505;old_locus_tag=CCO40_21505 NZ_CP075116.1 Protein Homology CDS 4502475 4503371 . - 0 ID=cds-WP_001805206.1;Parent=gene-CCO40_RS21505;Dbxref=GenBank:WP_001805206.1;Name=WP_001805206.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462904.3;locus_tag=CCO40_RS21505;product=sugar kinase;protein_id=WP_001805206.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4503536 4504432 . + . ID=gene-CCO40_RS21510;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=CCO40_RS21510;old_locus_tag=CCO40_21510 NZ_CP075116.1 Protein Homology CDS 4503536 4504432 . + 0 ID=cds-WP_023242402.1;Parent=gene-CCO40_RS21510;Dbxref=GenBank:WP_023242402.1;Name=WP_023242402.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462903.1;locus_tag=CCO40_RS21510;product=sulfolactaldehyde 3-reductase;protein_id=WP_023242402.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4504455 4505333 . + . ID=gene-CCO40_RS21515;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=CCO40_RS21515;old_locus_tag=CCO40_21515 NZ_CP075116.1 Protein Homology CDS 4504455 4505333 . + 0 ID=cds-WP_001067412.1;Parent=gene-CCO40_RS21515;Dbxref=GenBank:WP_001067412.1;Name=WP_001067412.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462902.1;locus_tag=CCO40_RS21515;product=sulfofructosephosphate aldolase;protein_id=WP_001067412.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4505349 4506590 . + . ID=gene-CCO40_RS21520;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=CCO40_RS21520;old_locus_tag=CCO40_21520 NZ_CP075116.1 Protein Homology CDS 4505349 4506590 . + 0 ID=cds-WP_000870940.1;Parent=gene-CCO40_RS21520;Dbxref=GenBank:WP_000870940.1;Name=WP_000870940.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312830.1;locus_tag=CCO40_RS21520;product=sulfoquinovose isomerase;protein_id=WP_000870940.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4506662 4507564 . + . ID=gene-CCO40_RS21525;Name=CCO40_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21525;old_locus_tag=CCO40_21525 NZ_CP075116.1 Protein Homology CDS 4506662 4507564 . + 0 ID=cds-WP_237219261.1;Parent=gene-CCO40_RS21525;Dbxref=GenBank:WP_237219261.1;Name=WP_237219261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001611165.1;locus_tag=CCO40_RS21525;product=aldose-1-epimerase;protein_id=WP_237219261.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4507653 4508528 . + . ID=gene-CCO40_RS21530;Name=CCO40_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21530;old_locus_tag=CCO40_21530 NZ_CP075116.1 Protein Homology CDS 4507653 4508528 . + 0 ID=cds-WP_000345334.1;Parent=gene-CCO40_RS21530;Dbxref=GenBank:WP_000345334.1;Name=WP_000345334.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312828.1;locus_tag=CCO40_RS21530;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000345334.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4508652 4510688 . + . ID=gene-CCO40_RS21535;Name=CCO40_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21535;old_locus_tag=CCO40_21535 NZ_CP075116.1 Protein Homology CDS 4508652 4510688 . + 0 ID=cds-WP_094889306.1;Parent=gene-CCO40_RS21535;Dbxref=GenBank:WP_094889306.1;Name=WP_094889306.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523759.1;locus_tag=CCO40_RS21535;product=alpha-glucosidase;protein_id=WP_094889306.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4510734 4512116 . + . ID=gene-CCO40_RS21540;Name=CCO40_RS21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21540;old_locus_tag=CCO40_21540 NZ_CP075116.1 Protein Homology CDS 4510734 4512116 . + 0 ID=cds-WP_000084233.1;Parent=gene-CCO40_RS21540;Dbxref=GenBank:WP_000084233.1;Name=WP_000084233.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084232.1;locus_tag=CCO40_RS21540;product=MFS transporter;protein_id=WP_000084233.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4512162 4513580 . + . ID=gene-CCO40_RS21545;Name=CCO40_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21545;old_locus_tag=CCO40_21545 NZ_CP075116.1 Protein Homology CDS 4512162 4513580 . + 0 ID=cds-WP_001112785.1;Parent=gene-CCO40_RS21545;Dbxref=GenBank:WP_001112785.1;Name=WP_001112785.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462897.1;locus_tag=CCO40_RS21545;product=MFS transporter;protein_id=WP_001112785.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4513648 4514340 . + . ID=gene-CCO40_RS21550;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=CCO40_RS21550;old_locus_tag=CCO40_21550 NZ_CP075116.1 Protein Homology CDS 4513648 4514340 . + 0 ID=cds-WP_000838828.1;Parent=gene-CCO40_RS21550;Dbxref=GenBank:WP_000838828.1;Name=WP_000838828.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462896.1;locus_tag=CCO40_RS21550;product=porin OmpL;protein_id=WP_000838828.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4514497 4515345 . + . ID=gene-CCO40_RS21555;Name=CCO40_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21555;old_locus_tag=CCO40_21555 NZ_CP075116.1 Protein Homology CDS 4514497 4515345 . + 0 ID=cds-WP_001042091.1;Parent=gene-CCO40_RS21555;Dbxref=GenBank:WP_001042091.1;Name=WP_001042091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462895.1;locus_tag=CCO40_RS21555;product=STM4015 family protein;protein_id=WP_001042091.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4515358 4516383 . + . ID=gene-CCO40_RS21560;Name=CCO40_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21560;old_locus_tag=CCO40_21560 NZ_CP075116.1 Protein Homology CDS 4515358 4516383 . + 0 ID=cds-WP_077943752.1;Parent=gene-CCO40_RS21560;Dbxref=GenBank:WP_077943752.1;Name=WP_077943752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462894.3;locus_tag=CCO40_RS21560;product=STM4014 family protein;protein_id=WP_077943752.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4516376 4517251 . + . ID=gene-CCO40_RS21565;Name=CCO40_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21565;old_locus_tag=CCO40_21565 NZ_CP075116.1 Protein Homology CDS 4516376 4517251 . + 0 ID=cds-WP_023993697.1;Parent=gene-CCO40_RS21565;Dbxref=GenBank:WP_023993697.1;Name=WP_023993697.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462893.3;locus_tag=CCO40_RS21565;product=STM4013/SEN3800 family hydrolase;protein_id=WP_023993697.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4517253 4518494 . + . ID=gene-CCO40_RS21570;Name=CCO40_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21570;old_locus_tag=CCO40_21570 NZ_CP075116.1 Protein Homology CDS 4517253 4518494 . + 0 ID=cds-WP_094889305.1;Parent=gene-CCO40_RS21570;Dbxref=GenBank:WP_094889305.1;Name=WP_094889305.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462892.1;locus_tag=CCO40_RS21570;product=STM4012 family radical SAM protein;protein_id=WP_094889305.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4518491 4519369 . + . ID=gene-CCO40_RS21575;Name=CCO40_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21575;old_locus_tag=CCO40_21575 NZ_CP075116.1 Protein Homology CDS 4518491 4519369 . + 0 ID=cds-WP_094889304.1;Parent=gene-CCO40_RS21575;Dbxref=GenBank:WP_094889304.1;Name=WP_094889304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462891.1;locus_tag=CCO40_RS21575;product=STM4011 family radical SAM protein;protein_id=WP_094889304.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4519354 4520088 . + . ID=gene-CCO40_RS21580;Name=CCO40_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21580;old_locus_tag=CCO40_21580 NZ_CP075116.1 Protein Homology CDS 4519354 4520088 . + 0 ID=cds-WP_094889303.1;Parent=gene-CCO40_RS21580;Dbxref=GenBank:WP_094889303.1;Name=WP_094889303.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462890.1;locus_tag=CCO40_RS21580;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_094889303.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4520143 4521966 . - . ID=gene-CCO40_RS21585;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=CCO40_RS21585;old_locus_tag=CCO40_21585 NZ_CP075116.1 Protein Homology CDS 4520143 4521966 . - 0 ID=cds-WP_000572060.1;Parent=gene-CCO40_RS21585;Dbxref=GenBank:WP_000572060.1;Name=WP_000572060.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462889.1;locus_tag=CCO40_RS21585;product=ribosome-dependent GTPase TypA;protein_id=WP_000572060.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4522342 4523751 . + . ID=gene-CCO40_RS21590;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=CCO40_RS21590;old_locus_tag=CCO40_21590 NZ_CP075116.1 Protein Homology CDS 4522342 4523751 . + 0 ID=cds-WP_001271699.1;Parent=gene-CCO40_RS21590;Dbxref=GenBank:WP_001271699.1;Name=WP_001271699.1;Ontology_term=GO:0008152,GO:1901704,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=metabolic process|0008152||IEA,L-glutamine biosynthetic process|1901704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=CCO40_RS21590;product=glutamate--ammonia ligase;protein_id=WP_001271699.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4524026 4525075 . + . ID=gene-CCO40_RS21595;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=CCO40_RS21595;old_locus_tag=CCO40_21595 NZ_CP075116.1 Protein Homology CDS 4524026 4525075 . + 0 ID=cds-WP_000146190.1;Parent=gene-CCO40_RS21595;Dbxref=GenBank:WP_000146190.1;Name=WP_000146190.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462886.1;locus_tag=CCO40_RS21595;product=nitrogen regulation protein NR(II);protein_id=WP_000146190.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4525084 4526493 . + . ID=gene-CCO40_RS21600;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=CCO40_RS21600;old_locus_tag=CCO40_21600 NZ_CP075116.1 Protein Homology CDS 4525084 4526493 . + 0 ID=cds-WP_094889302.1;Parent=gene-CCO40_RS21600;Dbxref=GenBank:WP_094889302.1;Name=WP_094889302.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=CCO40_RS21600;product=nitrogen regulation protein NR(I);protein_id=WP_094889302.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4526606 4526716 . + . ID=gene-CCO40_RS21605;Name=CCO40_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21605;old_locus_tag=CCO40_21605 NZ_CP075116.1 Protein Homology CDS 4526606 4526716 . + 0 ID=cds-WP_001578131.1;Parent=gene-CCO40_RS21605;Dbxref=GenBank:WP_001578131.1;Name=WP_001578131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=CCO40_RS21605;product=YshB family small membrane protein;protein_id=WP_001578131.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4526806 4528179 . - . ID=gene-CCO40_RS21610;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=CCO40_RS21610;old_locus_tag=CCO40_21610 NZ_CP075116.1 Protein Homology CDS 4526806 4528179 . - 0 ID=cds-WP_000003527.1;Parent=gene-CCO40_RS21610;Dbxref=GenBank:WP_000003527.1;Name=WP_000003527.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462884.1;locus_tag=CCO40_RS21610;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_000003527.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4528368 4528883 . - . ID=gene-CCO40_RS21615;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=CCO40_RS21615;old_locus_tag=CCO40_21615 NZ_CP075116.1 Protein Homology CDS 4528368 4528883 . - 0 ID=cds-WP_000743292.1;Parent=gene-CCO40_RS21615;Dbxref=GenBank:WP_000743292.1;Name=WP_000743292.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462883.1;locus_tag=CCO40_RS21615;product=Der GTPase-activating protein YihI;protein_id=WP_000743292.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4529002 4529226 . - . ID=gene-CCO40_RS21620;Name=CCO40_RS21620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21620;old_locus_tag=CCO40_21620 NZ_CP075116.1 Protein Homology CDS 4529002 4529226 . - 0 ID=cds-WP_001541209.1;Parent=gene-CCO40_RS21620;Dbxref=GenBank:WP_001541209.1;Name=WP_001541209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=CCO40_RS21620;product=hypothetical protein;protein_id=WP_001541209.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4529466 4530098 . + . ID=gene-CCO40_RS21625;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=CCO40_RS21625;old_locus_tag=CCO40_21625 NZ_CP075116.1 Protein Homology CDS 4529466 4530098 . + 0 ID=cds-WP_000183327.1;Parent=gene-CCO40_RS21625;Dbxref=GenBank:WP_000183327.1;Name=WP_000183327.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462881.1;locus_tag=CCO40_RS21625;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_000183327.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4530219 4530266 . - . ID=gene-CCO40_RS22810;Name=spfP;gbkey=Gene;gene=spfP;gene_biotype=protein_coding;locus_tag=CCO40_RS22810 NZ_CP075116.1 Protein Homology CDS 4530219 4530266 . - 0 ID=cds-WP_071892919.1;Parent=gene-CCO40_RS22810;Dbxref=GenBank:WP_071892919.1;Name=WP_071892919.1;gbkey=CDS;gene=spfP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_013606034.1;locus_tag=CCO40_RS22810;product=small protein SpfP;protein_id=WP_071892919.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4530433 4533219 . - . ID=gene-CCO40_RS21630;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=CCO40_RS21630;old_locus_tag=CCO40_21630 NZ_CP075116.1 Protein Homology CDS 4530433 4533219 . - 0 ID=cds-WP_001749213.1;Parent=gene-CCO40_RS21630;Dbxref=GenBank:WP_001749213.1;Name=WP_001749213.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=CCO40_RS21630;product=DNA polymerase I;protein_id=WP_001749213.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4533607 4534515 . + . ID=gene-CCO40_RS21635;Name=yihG;gbkey=Gene;gene=yihG;gene_biotype=protein_coding;locus_tag=CCO40_RS21635;old_locus_tag=CCO40_21635 NZ_CP075116.1 Protein Homology CDS 4533607 4534515 . + 0 ID=cds-WP_094889301.1;Parent=gene-CCO40_RS21635;Dbxref=GenBank:WP_094889301.1;Name=WP_094889301.1;gbkey=CDS;gene=yihG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462878.1;locus_tag=CCO40_RS21635;product=1-acylglycerol-3-phosphate O-acyltransferase%2C YihG family;protein_id=WP_094889301.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4534528 4535151 . - . ID=gene-CCO40_RS21640;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=CCO40_RS21640;old_locus_tag=CCO40_21640 NZ_CP075116.1 Protein Homology CDS 4534528 4535151 . - 0 ID=cds-WP_000725364.1;Parent=gene-CCO40_RS21640;Dbxref=GenBank:WP_000725364.1;Name=WP_000725364.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462877.1;locus_tag=CCO40_RS21640;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725364.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4535168 4536154 . - . ID=gene-CCO40_RS21645;Name=CCO40_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21645;old_locus_tag=CCO40_21645 NZ_CP075116.1 Protein Homology CDS 4535168 4536154 . - 0 ID=cds-WP_000999264.1;Parent=gene-CCO40_RS21645;Dbxref=GenBank:WP_000999264.1;Name=WP_000999264.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462876.1;locus_tag=CCO40_RS21645;product=serine/threonine protein kinase;protein_id=WP_000999264.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4536231 4536500 . - . ID=gene-CCO40_RS21650;Name=CCO40_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21650;old_locus_tag=CCO40_21650 NZ_CP075116.1 Protein Homology CDS 4536231 4536500 . - 0 ID=cds-WP_000649858.1;Parent=gene-CCO40_RS21650;Dbxref=GenBank:WP_000649858.1;Name=WP_000649858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=CCO40_RS21650;product=YihD family protein;protein_id=WP_000649858.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4536570 4537154 . + . ID=gene-CCO40_RS21655;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=CCO40_RS21655;old_locus_tag=CCO40_21655 NZ_CP075116.1 Protein Homology CDS 4536570 4537154 . + 0 ID=cds-WP_001046890.1;Parent=gene-CCO40_RS21655;Dbxref=GenBank:WP_001046890.1;Name=WP_001046890.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462874.1;locus_tag=CCO40_RS21655;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_001046890.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4537151 4537666 . + . ID=gene-CCO40_RS21660;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=CCO40_RS21660;old_locus_tag=CCO40_21660 NZ_CP075116.1 Protein Homology CDS 4537151 4537666 . + 0 ID=cds-WP_012543414.1;Parent=gene-CCO40_RS21660;Dbxref=GenBank:WP_012543414.1;Name=WP_012543414.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462873.1;locus_tag=CCO40_RS21660;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_012543414.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4537969 4538084 . - . ID=gene-CCO40_RS21665;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO40_RS21665;old_locus_tag=CCO40_21665 NZ_CP075116.1 cmsearch rRNA 4537969 4538084 . - . ID=rna-CCO40_RS21665;Parent=gene-CCO40_RS21665;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS21665;product=5S ribosomal RNA NZ_CP075116.1 cmsearch exon 4537969 4538084 . - . ID=exon-CCO40_RS21665-1;Parent=rna-CCO40_RS21665;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS21665;product=5S ribosomal RNA NZ_CP075116.1 RefSeq gene 4538178 4541084 . - . ID=gene-CCO40_RS21670;Name=CCO40_RS21670;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO40_RS21670;old_locus_tag=CCO40_21670 NZ_CP075116.1 cmsearch rRNA 4538178 4541084 . - . ID=rna-CCO40_RS21670;Parent=gene-CCO40_RS21670;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS21670;product=23S ribosomal RNA NZ_CP075116.1 cmsearch exon 4538178 4541084 . - . ID=exon-CCO40_RS21670-1;Parent=rna-CCO40_RS21670;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS21670;product=23S ribosomal RNA NZ_CP075116.1 RefSeq gene 4541265 4541340 . - . ID=gene-CCO40_RS21675;Name=CCO40_RS21675;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS21675;old_locus_tag=CCO40_21675 NZ_CP075116.1 tRNAscan-SE tRNA 4541265 4541340 . - . ID=rna-CCO40_RS21675;Parent=gene-CCO40_RS21675;anticodon=(pos:complement(4541305..4541307));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS21675;product=tRNA-Ala NZ_CP075116.1 tRNAscan-SE exon 4541265 4541340 . - . ID=exon-CCO40_RS21675-1;Parent=rna-CCO40_RS21675;anticodon=(pos:complement(4541305..4541307));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS21675;product=tRNA-Ala NZ_CP075116.1 RefSeq gene 4541452 4541528 . - . ID=gene-CCO40_RS21680;Name=CCO40_RS21680;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS21680;old_locus_tag=CCO40_21680 NZ_CP075116.1 tRNAscan-SE tRNA 4541452 4541528 . - . ID=rna-CCO40_RS21680;Parent=gene-CCO40_RS21680;anticodon=(pos:complement(4541492..4541494));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS21680;product=tRNA-Ile NZ_CP075116.1 tRNAscan-SE exon 4541452 4541528 . - . ID=exon-CCO40_RS21680-1;Parent=rna-CCO40_RS21680;anticodon=(pos:complement(4541492..4541494));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS21680;product=tRNA-Ile NZ_CP075116.1 RefSeq gene 4541598 4543139 . - . ID=gene-CCO40_RS21685;Name=CCO40_RS21685;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO40_RS21685;old_locus_tag=CCO40_21685 NZ_CP075116.1 cmsearch rRNA 4541598 4543139 . - . ID=rna-CCO40_RS21685;Parent=gene-CCO40_RS21685;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS21685;product=16S ribosomal RNA NZ_CP075116.1 cmsearch exon 4541598 4543139 . - . ID=exon-CCO40_RS21685-1;Parent=rna-CCO40_RS21685;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS21685;product=16S ribosomal RNA NZ_CP075116.1 RefSeq gene 4543517 4544062 . - . ID=gene-CCO40_RS21690;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=CCO40_RS21690;old_locus_tag=CCO40_21690 NZ_CP075116.1 Protein Homology CDS 4543517 4544062 . - 0 ID=cds-WP_000853982.1;Parent=gene-CCO40_RS21690;Dbxref=GenBank:WP_000853982.1;Name=WP_000853982.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462872.1;locus_tag=CCO40_RS21690;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853982.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4544074 4545525 . - . ID=gene-CCO40_RS21695;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=CCO40_RS21695;old_locus_tag=CCO40_21695 NZ_CP075116.1 Protein Homology CDS 4544074 4545525 . - 0 ID=cds-WP_000545688.1;Parent=gene-CCO40_RS21695;Dbxref=GenBank:WP_000545688.1;Name=WP_000545688.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=CCO40_RS21695;product=Trk system potassium transporter TrkH;protein_id=WP_000545688.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4545564 4546178 . - . ID=gene-CCO40_RS21700;Name=CCO40_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21700;old_locus_tag=CCO40_21700 NZ_CP075116.1 Protein Homology CDS 4545564 4546178 . - 0 ID=cds-WP_001661585.1;Parent=gene-CCO40_RS21700;Dbxref=GenBank:WP_001661585.1;Name=WP_001661585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462870.1;locus_tag=CCO40_RS21700;product=IMPACT family protein;protein_id=WP_001661585.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4546178 4547509 . - . ID=gene-CCO40_RS21705;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=CCO40_RS21705;old_locus_tag=CCO40_21705 NZ_CP075116.1 Protein Homology CDS 4546178 4547509 . - 0 ID=cds-WP_000444529.1;Parent=gene-CCO40_RS21705;Dbxref=GenBank:WP_000444529.1;Name=WP_000444529.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=CCO40_RS21705;product=Xaa-Pro dipeptidase;protein_id=WP_000444529.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4547699 4549888 . + . ID=gene-CCO40_RS21710;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=CCO40_RS21710;old_locus_tag=CCO40_21710 NZ_CP075116.1 Protein Homology CDS 4547699 4549888 . + 0 ID=cds-WP_061378367.1;Parent=gene-CCO40_RS21710;Dbxref=GenBank:WP_061378367.1;Name=WP_061378367.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=(3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462868.1;locus_tag=CCO40_RS21710;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_061378367.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4549898 4551061 . + . ID=gene-CCO40_RS21715;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=CCO40_RS21715;old_locus_tag=CCO40_21715 NZ_CP075116.1 Protein Homology CDS 4549898 4551061 . + 0 ID=cds-WP_000438778.1;Parent=gene-CCO40_RS21715;Dbxref=GenBank:WP_000438778.1;Name=WP_000438778.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462867.1;locus_tag=CCO40_RS21715;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_000438778.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4551258 4553081 . - . ID=gene-CCO40_RS21720;Name=CCO40_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21720;old_locus_tag=CCO40_21720 NZ_CP075116.1 Protein Homology CDS 4551258 4553081 . - 0 ID=cds-WP_000669902.1;Parent=gene-CCO40_RS21720;Dbxref=GenBank:WP_000669902.1;Name=WP_000669902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669888.1;locus_tag=CCO40_RS21720;product=aryl-sulfate sulfotransferase;protein_id=WP_000669902.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4553335 4554036 . - . ID=gene-CCO40_RS21725;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=CCO40_RS21725;old_locus_tag=CCO40_21725 NZ_CP075116.1 Protein Homology CDS 4553335 4554036 . - 0 ID=cds-WP_000209831.1;Parent=gene-CCO40_RS21725;Dbxref=GenBank:WP_000209831.1;Name=WP_000209831.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=CCO40_RS21725;product=NAD(P)H-flavin reductase;protein_id=WP_000209831.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4554122 4555600 . - . ID=gene-CCO40_RS21730;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=CCO40_RS21730;old_locus_tag=CCO40_21730 NZ_CP075116.1 Protein Homology CDS 4554122 4555600 . - 0 ID=cds-WP_000339760.1;Parent=gene-CCO40_RS21730;Dbxref=GenBank:WP_000339760.1;Name=WP_000339760.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462863.1;locus_tag=CCO40_RS21730;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_000339760.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4555786 4556274 . + . ID=gene-CCO40_RS21735;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=CCO40_RS21735;old_locus_tag=CCO40_21735 NZ_CP075116.1 Protein Homology CDS 4555786 4556274 . + 0 ID=cds-WP_001192410.1;Parent=gene-CCO40_RS21735;Dbxref=GenBank:WP_001192410.1;Name=WP_001192410.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=CCO40_RS21735;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_001192410.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4556282 4557064 . - . ID=gene-CCO40_RS21740;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=CCO40_RS21740;old_locus_tag=CCO40_21740 NZ_CP075116.1 Protein Homology CDS 4556282 4557064 . - 0 ID=cds-WP_000459635.1;Parent=gene-CCO40_RS21740;Dbxref=GenBank:WP_000459635.1;Name=WP_000459635.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462861.3;locus_tag=CCO40_RS21740;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_000459635.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4557106 4557885 . - . ID=gene-CCO40_RS21745;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=CCO40_RS21745;old_locus_tag=CCO40_21745 NZ_CP075116.1 Protein Homology CDS 4557106 4557885 . - 0 ID=cds-WP_000257554.1;Parent=gene-CCO40_RS21745;Dbxref=GenBank:WP_000257554.1;Name=WP_000257554.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462860.1;locus_tag=CCO40_RS21745;product=Sec-independent protein translocase subunit TatC;protein_id=WP_000257554.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4557888 4558436 . - . ID=gene-CCO40_RS21750;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=CCO40_RS21750;old_locus_tag=CCO40_21750 NZ_CP075116.1 Protein Homology CDS 4557888 4558436 . - 0 ID=cds-WP_000459612.1;Parent=gene-CCO40_RS21750;Dbxref=GenBank:WP_000459612.1;Name=WP_000459612.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=transmembrane protein transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462859.1;locus_tag=CCO40_RS21750;product=Sec-independent protein translocase protein TatB;protein_id=WP_000459612.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4558440 4558694 . - . ID=gene-CCO40_RS21755;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=CCO40_RS21755;old_locus_tag=CCO40_21755 NZ_CP075116.1 Protein Homology CDS 4558440 4558694 . - 0 ID=cds-WP_000508972.1;Parent=gene-CCO40_RS21755;Dbxref=GenBank:WP_000508972.1;Name=WP_000508972.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462858.1;locus_tag=CCO40_RS21755;product=Sec-independent protein translocase subunit TatA;protein_id=WP_000508972.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4558900 4560540 . - . ID=gene-CCO40_RS21760;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=CCO40_RS21760;old_locus_tag=CCO40_21760 NZ_CP075116.1 Protein Homology CDS 4558900 4560540 . - 0 ID=cds-WP_000187559.1;Parent=gene-CCO40_RS21760;Dbxref=GenBank:WP_000187559.1;Name=WP_000187559.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462857.1;locus_tag=CCO40_RS21760;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_000187559.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4560537 4561142 . - . ID=gene-CCO40_RS21765;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=CCO40_RS21765;old_locus_tag=CCO40_21765 NZ_CP075116.1 Protein Homology CDS 4560537 4561142 . - 0 ID=cds-WP_001116086.1;Parent=gene-CCO40_RS21765;Dbxref=GenBank:WP_001116086.1;Name=WP_001116086.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462856.1;locus_tag=CCO40_RS21765;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_001116086.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4561152 4561907 . - . ID=gene-CCO40_RS21770;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=CCO40_RS21770;old_locus_tag=CCO40_21770 NZ_CP075116.1 Protein Homology CDS 4561152 4561907 . - 0 ID=cds-WP_000229009.1;Parent=gene-CCO40_RS21770;Dbxref=GenBank:WP_000229009.1;Name=WP_000229009.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462855.1;locus_tag=CCO40_RS21770;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000229009.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4562003 4563433 . - . ID=gene-CCO40_RS21775;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=CCO40_RS21775;old_locus_tag=CCO40_21775 NZ_CP075116.1 Protein Homology CDS 4562003 4563433 . - 0 ID=cds-WP_000355562.1;Parent=gene-CCO40_RS21775;Dbxref=GenBank:WP_000355562.1;Name=WP_000355562.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462854.1;locus_tag=CCO40_RS21775;product=DNA recombination protein RmuC;protein_id=WP_000355562.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4563573 4564334 . - . ID=gene-CCO40_RS21780;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=CCO40_RS21780;old_locus_tag=CCO40_21780 NZ_CP075116.1 Protein Homology CDS 4563573 4564334 . - 0 ID=cds-WP_000045169.1;Parent=gene-CCO40_RS21780;Dbxref=GenBank:WP_000045169.1;Name=WP_000045169.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462853.1;locus_tag=CCO40_RS21780;product=uridine phosphorylase;protein_id=WP_000045169.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4564593 4565405 . + . ID=gene-CCO40_RS21785;Name=CCO40_RS21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21785;old_locus_tag=CCO40_21785 NZ_CP075116.1 Protein Homology CDS 4564593 4565405 . + 0 ID=cds-WP_000213959.1;Parent=gene-CCO40_RS21785;Dbxref=GenBank:WP_000213959.1;Name=WP_000213959.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462852.1;locus_tag=CCO40_RS21785;product=dienelactone hydrolase family protein;protein_id=WP_000213959.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4565485 4566828 . - . ID=gene-CCO40_RS21790;Name=CCO40_RS21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21790;old_locus_tag=CCO40_21790 NZ_CP075116.1 Protein Homology CDS 4565485 4566828 . - 0 ID=cds-WP_000017936.1;Parent=gene-CCO40_RS21790;Dbxref=GenBank:WP_000017936.1;Name=WP_000017936.1;Ontology_term=GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462851.1;locus_tag=CCO40_RS21790;product=anaerobic sulfatase maturase;protein_id=WP_000017936.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4567172 4569436 . - . ID=gene-CCO40_RS21795;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=CCO40_RS21795;old_locus_tag=CCO40_21795 NZ_CP075116.1 Protein Homology CDS 4567172 4569436 . - 0 ID=cds-WP_000154192.1;Parent=gene-CCO40_RS21795;Dbxref=GenBank:WP_000154192.1;Name=WP_000154192.1;Ontology_term=GO:0008652,GO:0071265,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=CCO40_RS21795;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_000154192.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4569685 4570638 . + . ID=gene-CCO40_RS21800;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=CCO40_RS21800;old_locus_tag=CCO40_21800 NZ_CP075116.1 Protein Homology CDS 4569685 4570638 . + 0 ID=cds-WP_000569786.1;Parent=gene-CCO40_RS21800;Dbxref=GenBank:WP_000569786.1;Name=WP_000569786.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462849.1;locus_tag=CCO40_RS21800;product=HTH-type transcriptional regulator MetR;protein_id=WP_000569786.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4570526 4571425 . - . ID=gene-CCO40_RS21805;Name=CCO40_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21805;old_locus_tag=CCO40_21805 NZ_CP075116.1 Protein Homology CDS 4570526 4571425 . - 0 ID=cds-WP_001196254.1;Parent=gene-CCO40_RS21805;Dbxref=GenBank:WP_001196254.1;Name=WP_001196254.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462848.1;locus_tag=CCO40_RS21805;product=carboxylate/amino acid/amine transporter;protein_id=WP_001196254.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4571506 4572306 . - . ID=gene-CCO40_RS21810;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=CCO40_RS21810;old_locus_tag=CCO40_21810 NZ_CP075116.1 Protein Homology CDS 4571506 4572306 . - 0 ID=cds-WP_000285338.1;Parent=gene-CCO40_RS21810;Dbxref=GenBank:WP_000285338.1;Name=WP_000285338.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462847.1;locus_tag=CCO40_RS21810;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_000285338.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4572322 4573338 . - . ID=gene-CCO40_RS21815;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=CCO40_RS21815;old_locus_tag=CCO40_21815 NZ_CP075116.1 Protein Homology CDS 4572322 4573338 . - 0 ID=cds-WP_000487682.1;Parent=gene-CCO40_RS21815;Dbxref=GenBank:WP_000487682.1;Name=WP_000487682.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=CCO40_RS21815;product=lysophospholipase L2;protein_id=WP_000487682.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4573449 4574069 . + . ID=gene-CCO40_RS21820;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=CCO40_RS21820;old_locus_tag=CCO40_21820 NZ_CP075116.1 Protein Homology CDS 4573449 4574069 . + 0 ID=cds-WP_000142524.1;Parent=gene-CCO40_RS21820;Dbxref=GenBank:WP_000142524.1;Name=WP_000142524.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462845.1;locus_tag=CCO40_RS21820;product=homoserine/homoserine lactone efflux protein;protein_id=WP_000142524.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4574109 4574729 . - . ID=gene-CCO40_RS21825;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=CCO40_RS21825;old_locus_tag=CCO40_21825 NZ_CP075116.1 Protein Homology CDS 4574109 4574729 . - 0 ID=cds-WP_000928814.1;Parent=gene-CCO40_RS21825;Dbxref=GenBank:WP_000928814.1;Name=WP_000928814.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462844.1;locus_tag=CCO40_RS21825;product=threonine export protein RhtC;protein_id=WP_000928814.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4574793 4576622 . - . ID=gene-CCO40_RS21830;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=CCO40_RS21830;old_locus_tag=CCO40_21830 NZ_CP075116.1 Protein Homology CDS 4574793 4576622 . - 0 ID=cds-WP_001526553.1;Parent=gene-CCO40_RS21830;Dbxref=GenBank:WP_001526553.1;Name=WP_001526553.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=CCO40_RS21830;product=ATP-dependent DNA helicase RecQ;protein_id=WP_001526553.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4576706 4577575 . - . ID=gene-CCO40_RS21835;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=CCO40_RS21835;old_locus_tag=CCO40_21835 NZ_CP075116.1 Protein Homology CDS 4576706 4577575 . - 0 ID=cds-WP_001201692.1;Parent=gene-CCO40_RS21835;Dbxref=GenBank:WP_001201692.1;Name=WP_001201692.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=glycerophospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462842.1;locus_tag=CCO40_RS21835;product=phospholipase A;protein_id=WP_001201692.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4577740 4578207 . + . ID=gene-CCO40_RS21840;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=CCO40_RS21840;old_locus_tag=CCO40_21840 NZ_CP075116.1 Protein Homology CDS 4577740 4578207 . + 0 ID=cds-WP_001277136.1;Parent=gene-CCO40_RS21840;Dbxref=GenBank:WP_001277136.1;Name=WP_001277136.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=CCO40_RS21840;product=acyl-CoA thioesterase YigI;protein_id=WP_001277136.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4578251 4579135 . + . ID=gene-CCO40_RS21845;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=CCO40_RS21845;old_locus_tag=CCO40_21845 NZ_CP075116.1 Protein Homology CDS 4578251 4579135 . + 0 ID=cds-WP_094889342.1;Parent=gene-CCO40_RS21845;Dbxref=GenBank:WP_094889342.1;Name=WP_094889342.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462840.1;locus_tag=CCO40_RS21845;product=EamA family transporter RarD;protein_id=WP_094889342.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4579170 4579628 . + . ID=gene-CCO40_RS21850;Name=CCO40_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21850;old_locus_tag=CCO40_21850 NZ_CP075116.1 Protein Homology CDS 4579170 4579628 . + 0 ID=cds-WP_001738611.1;Parent=gene-CCO40_RS21850;Dbxref=GenBank:WP_001738611.1;Name=WP_001738611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462839.1;locus_tag=CCO40_RS21850;product=membrane protein;protein_id=WP_001738611.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4579644 4580024 . + . ID=gene-CCO40_RS21855;Name=yigF;gbkey=Gene;gene=yigF;gene_biotype=protein_coding;locus_tag=CCO40_RS21855;old_locus_tag=CCO40_21855 NZ_CP075116.1 Protein Homology CDS 4579644 4580024 . + 0 ID=cds-WP_000356594.1;Parent=gene-CCO40_RS21855;Dbxref=GenBank:WP_000356594.1;Name=WP_000356594.1;gbkey=CDS;gene=yigF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462838.1;locus_tag=CCO40_RS21855;product=inner membrane protein YigF;protein_id=WP_000356594.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4580073 4581023 . - . ID=gene-CCO40_RS21860;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=CCO40_RS21860;old_locus_tag=CCO40_21860 NZ_CP075116.1 Protein Homology CDS 4580073 4581023 . - 0 ID=cds-WP_000947139.1;Parent=gene-CCO40_RS21860;Dbxref=GenBank:WP_000947139.1;Name=WP_000947139.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=CCO40_RS21860;product=magnesium/cobalt transporter CorA;protein_id=WP_000947139.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4581179 4581235 . - . ID=gene-CCO40_RS21865;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=CCO40_RS21865;old_locus_tag=CCO40_21865 NZ_CP075116.1 Protein Homology CDS 4581179 4581235 . - 0 ID=cds-WP_212723238.1;Parent=gene-CCO40_RS21865;Dbxref=GenBank:WP_212723238.1;Name=WP_212723238.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=CCO40_RS21865;product=YsgD/CorL family protein;protein_id=WP_212723238.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4581495 4583657 . - . ID=gene-CCO40_RS21870;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=CCO40_RS21870;old_locus_tag=CCO40_21870 NZ_CP075116.1 Protein Homology CDS 4581495 4583657 . - 0 ID=cds-WP_094889341.1;Parent=gene-CCO40_RS21870;Dbxref=GenBank:WP_094889341.1;Name=WP_094889341.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462836.1;locus_tag=CCO40_RS21870;product=DNA helicase II;protein_id=WP_094889341.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4583793 4584509 . - . ID=gene-CCO40_RS21875;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=CCO40_RS21875;old_locus_tag=CCO40_21875 NZ_CP075116.1 Protein Homology CDS 4583793 4584509 . - 0 ID=cds-WP_094889340.1;Parent=gene-CCO40_RS21875;Dbxref=GenBank:WP_094889340.1;Name=WP_094889340.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462835.1;locus_tag=CCO40_RS21875;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_094889340.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4584509 4585411 . - . ID=gene-CCO40_RS21880;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=CCO40_RS21880;old_locus_tag=CCO40_21880 NZ_CP075116.1 Protein Homology CDS 4584509 4585411 . - 0 ID=cds-WP_000132874.1;Parent=gene-CCO40_RS21880;Dbxref=GenBank:WP_000132874.1;Name=WP_000132874.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462834.1;locus_tag=CCO40_RS21880;product=tyrosine recombinase XerC;protein_id=WP_000132874.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4585408 4586115 . - . ID=gene-CCO40_RS21885;Name=CCO40_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21885;old_locus_tag=CCO40_21885 NZ_CP075116.1 Protein Homology CDS 4585408 4586115 . - 0 ID=cds-WP_000812760.1;Parent=gene-CCO40_RS21885;Dbxref=GenBank:WP_000812760.1;Name=WP_000812760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462833.1;locus_tag=CCO40_RS21885;product=DUF484 domain-containing protein;protein_id=WP_000812760.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4586112 4586936 . - . ID=gene-CCO40_RS21890;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=CCO40_RS21890;old_locus_tag=CCO40_21890 NZ_CP075116.1 Protein Homology CDS 4586112 4586936 . - 0 ID=cds-WP_001160671.1;Parent=gene-CCO40_RS21890;Dbxref=GenBank:WP_001160671.1;Name=WP_001160671.1;Ontology_term=GO:0009085,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=CCO40_RS21890;product=diaminopimelate epimerase;protein_id=WP_001160671.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4586973 4587176 . - . ID=gene-CCO40_RS21895;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=CCO40_RS21895;old_locus_tag=CCO40_21895 NZ_CP075116.1 Protein Homology CDS 4586973 4587176 . - 0 ID=cds-WP_000799903.1;Parent=gene-CCO40_RS21895;Dbxref=GenBank:WP_000799903.1;Name=WP_000799903.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462831.1;locus_tag=CCO40_RS21895;product=LPS translocon maturation chaperone LptM;protein_id=WP_000799903.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4587362 4587613 . + . ID=gene-CCO40_RS21900;Name=CCO40_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21900;old_locus_tag=CCO40_21900 NZ_CP075116.1 GeneMarkS-2+ CDS 4587362 4587613 . + 0 ID=cds-WP_086812198.1;Parent=gene-CCO40_RS21900;Dbxref=GenBank:WP_086812198.1;Name=WP_086812198.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CCO40_RS21900;product=hypothetical protein;protein_id=WP_086812198.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 4587583 4587884 . + . ID=gene-CCO40_RS22590;Name=CCO40_RS22590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22590;partial=true;pseudo=true;start_range=.,4587583 NZ_CP075116.1 Protein Homology CDS 4587583 4587884 . + 0 ID=cds-CCO40_RS22590;Parent=gene-CCO40_RS22590;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200019.1;locus_tag=CCO40_RS22590;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4587583;transl_table=11 NZ_CP075116.1 RefSeq gene 4587872 4588261 . + . ID=gene-CCO40_RS21905;Name=CCO40_RS21905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21905;old_locus_tag=CCO40_21905 NZ_CP075116.1 Protein Homology CDS 4587872 4588261 . + 0 ID=cds-WP_001125556.1;Parent=gene-CCO40_RS21905;Dbxref=GenBank:WP_001125556.1;Name=WP_001125556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462830.1;locus_tag=CCO40_RS21905;product=DUF3021 family protein;protein_id=WP_001125556.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4588331 4588651 . + . ID=gene-CCO40_RS21910;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=CCO40_RS21910;old_locus_tag=CCO40_21910 NZ_CP075116.1 Protein Homology CDS 4588331 4588651 . + 0 ID=cds-WP_000999930.1;Parent=gene-CCO40_RS21910;Dbxref=GenBank:WP_000999930.1;Name=WP_000999930.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=CCO40_RS21910;product=iron donor protein CyaY;protein_id=WP_000999930.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4588729 4591275 . - . ID=gene-CCO40_RS21915;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=CCO40_RS21915;old_locus_tag=CCO40_21915 NZ_CP075116.1 Protein Homology CDS 4588729 4591275 . - 0 ID=cds-WP_000281718.1;Parent=gene-CCO40_RS21915;Dbxref=GenBank:WP_000281718.1;Name=WP_000281718.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462825.1;locus_tag=CCO40_RS21915;product=class I adenylate cyclase;protein_id=WP_000281718.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4591652 4592593 . + . ID=gene-CCO40_RS21920;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=CCO40_RS21920;old_locus_tag=CCO40_21920 NZ_CP075116.1 Protein Homology CDS 4591652 4592593 . + 0 ID=cds-WP_001521319.1;Parent=gene-CCO40_RS21920;Dbxref=GenBank:WP_001521319.1;Name=WP_001521319.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=CCO40_RS21920;product=hydroxymethylbilane synthase;protein_id=WP_001521319.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4592590 4593330 . + . ID=gene-CCO40_RS21925;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=CCO40_RS21925;old_locus_tag=CCO40_21925 NZ_CP075116.1 Protein Homology CDS 4592590 4593330 . + 0 ID=cds-WP_001621220.1;Parent=gene-CCO40_RS21925;Dbxref=GenBank:WP_001621220.1;Name=WP_001621220.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=CCO40_RS21925;product=uroporphyrinogen-III synthase;protein_id=WP_001621220.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4593352 4594521 . + . ID=gene-CCO40_RS21930;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=CCO40_RS21930;old_locus_tag=CCO40_21930 NZ_CP075116.1 Protein Homology CDS 4593352 4594521 . + 0 ID=cds-WP_000138954.1;Parent=gene-CCO40_RS21930;Dbxref=GenBank:WP_000138954.1;Name=WP_000138954.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462822.1;locus_tag=CCO40_RS21930;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_000138954.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4594524 4595720 . + . ID=gene-CCO40_RS21935;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=CCO40_RS21935;old_locus_tag=CCO40_21935 NZ_CP075116.1 Protein Homology CDS 4594524 4595720 . + 0 ID=cds-WP_023602562.1;Parent=gene-CCO40_RS21935;Dbxref=GenBank:WP_023602562.1;Name=WP_023602562.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=CCO40_RS21935;product=protoheme IX biogenesis protein HemY;protein_id=WP_023602562.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4596302 4596378 . - . ID=gene-CCO40_RS21940;Name=CCO40_RS21940;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS21940;old_locus_tag=CCO40_21940 NZ_CP075116.1 tRNAscan-SE tRNA 4596302 4596378 . - . ID=rna-CCO40_RS21940;Parent=gene-CCO40_RS21940;anticodon=(pos:complement(4596342..4596344));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS21940;product=tRNA-Pro NZ_CP075116.1 tRNAscan-SE exon 4596302 4596378 . - . ID=exon-CCO40_RS21940-1;Parent=rna-CCO40_RS21940;anticodon=(pos:complement(4596342..4596344));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS21940;product=tRNA-Pro NZ_CP075116.1 RefSeq gene 4596421 4596507 . - . ID=gene-CCO40_RS21945;Name=CCO40_RS21945;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS21945;old_locus_tag=CCO40_21945 NZ_CP075116.1 tRNAscan-SE tRNA 4596421 4596507 . - . ID=rna-CCO40_RS21945;Parent=gene-CCO40_RS21945;anticodon=(pos:complement(4596471..4596473));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS21945;product=tRNA-Leu NZ_CP075116.1 tRNAscan-SE exon 4596421 4596507 . - . ID=exon-CCO40_RS21945-1;Parent=rna-CCO40_RS21945;anticodon=(pos:complement(4596471..4596473));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS21945;product=tRNA-Leu NZ_CP075116.1 RefSeq gene 4596528 4596603 . - . ID=gene-CCO40_RS21950;Name=CCO40_RS21950;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS21950;old_locus_tag=CCO40_21950 NZ_CP075116.1 tRNAscan-SE tRNA 4596528 4596603 . - . ID=rna-CCO40_RS21950;Parent=gene-CCO40_RS21950;anticodon=(pos:complement(4596568..4596570));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS21950;product=tRNA-His NZ_CP075116.1 tRNAscan-SE exon 4596528 4596603 . - . ID=exon-CCO40_RS21950-1;Parent=rna-CCO40_RS21950;anticodon=(pos:complement(4596568..4596570));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS21950;product=tRNA-His NZ_CP075116.1 RefSeq gene 4596658 4596734 . - . ID=gene-CCO40_RS21955;Name=CCO40_RS21955;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS21955;old_locus_tag=CCO40_21955 NZ_CP075116.1 tRNAscan-SE tRNA 4596658 4596734 . - . ID=rna-CCO40_RS21955;Parent=gene-CCO40_RS21955;anticodon=(pos:complement(4596698..4596700));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS21955;product=tRNA-Arg NZ_CP075116.1 tRNAscan-SE exon 4596658 4596734 . - . ID=exon-CCO40_RS21955-1;Parent=rna-CCO40_RS21955;anticodon=(pos:complement(4596698..4596700));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS21955;product=tRNA-Arg NZ_CP075116.1 RefSeq gene 4596837 4598222 . - . ID=gene-CCO40_RS21960;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=CCO40_RS21960;old_locus_tag=CCO40_21960 NZ_CP075116.1 Protein Homology CDS 4596837 4598222 . - 0 ID=cds-WP_000818378.1;Parent=gene-CCO40_RS21960;Dbxref=GenBank:WP_000818378.1;Name=WP_000818378.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462820.1;locus_tag=CCO40_RS21960;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_000818378.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4598429 4599169 . - . ID=gene-CCO40_RS21965;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=CCO40_RS21965;old_locus_tag=CCO40_21965 NZ_CP075116.1 Protein Homology CDS 4598429 4599169 . - 0 ID=cds-WP_000183617.1;Parent=gene-CCO40_RS21965;Dbxref=GenBank:WP_000183617.1;Name=WP_000183617.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462819.1;locus_tag=CCO40_RS21965;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_000183617.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4599166 4600524 . - . ID=gene-CCO40_RS21970;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=CCO40_RS21970;old_locus_tag=CCO40_21970 NZ_CP075116.1 Protein Homology CDS 4599166 4600524 . - 0 ID=cds-WP_000055605.1;Parent=gene-CCO40_RS21970;Dbxref=GenBank:WP_000055605.1;Name=WP_000055605.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462818.1;locus_tag=CCO40_RS21970;product=ECA oligosaccharide polymerase;protein_id=WP_000055605.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4600521 4601600 . - . ID=gene-CCO40_RS21975;Name=CCO40_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS21975;old_locus_tag=CCO40_21975 NZ_CP075116.1 Protein Homology CDS 4600521 4601600 . - 0 ID=cds-WP_094889339.1;Parent=gene-CCO40_RS21975;Dbxref=GenBank:WP_094889339.1;Name=WP_094889339.1;Ontology_term=GO:0000271,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462817.1;locus_tag=CCO40_RS21975;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_094889339.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4601597 4602847 . - . ID=gene-CCO40_RS21980;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=CCO40_RS21980;old_locus_tag=CCO40_21980 NZ_CP075116.1 Protein Homology CDS 4601597 4602847 . - 0 ID=cds-WP_000050288.1;Parent=gene-CCO40_RS21980;Dbxref=GenBank:WP_000050288.1;Name=WP_000050288.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=CCO40_RS21980;product=lipid III flippase WzxE;protein_id=WP_000050288.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4602849 4603979 . - . ID=gene-CCO40_RS21985;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=CCO40_RS21985;old_locus_tag=CCO40_21985 NZ_CP075116.1 Protein Homology CDS 4602849 4603979 . - 0 ID=cds-WP_000612080.1;Parent=gene-CCO40_RS21985;Dbxref=GenBank:WP_000612080.1;Name=WP_000612080.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose:2-oxoglutarate transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462815.1;locus_tag=CCO40_RS21985;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_000612080.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4603984 4604661 . - . ID=gene-CCO40_RS21990;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=CCO40_RS21990;old_locus_tag=CCO40_21990 NZ_CP075116.1 Protein Homology CDS 4603984 4604661 . - 0 ID=cds-WP_001145156.1;Parent=gene-CCO40_RS21990;Dbxref=GenBank:WP_001145156.1;Name=WP_001145156.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=CCO40_RS21990;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_001145156.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 4604639 4604803 . - . ID=gene-CCO40_RS21995;Name=CCO40_RS21995;end_range=4604803,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS21995;old_locus_tag=CCO40_21995;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 4604639 4604803 . - 0 ID=cds-CCO40_RS21995;Parent=gene-CCO40_RS21995;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4604803,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=CCO40_RS21995;partial=true;product=glucose-1-phosphate thymidylyltransferase;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq gene 4604896 4605963 . - . ID=gene-CCO40_RS22000;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=CCO40_RS22000;old_locus_tag=CCO40_22000 NZ_CP075116.1 Protein Homology CDS 4604896 4605963 . - 0 ID=cds-WP_000822145.1;Parent=gene-CCO40_RS22000;Dbxref=GenBank:WP_000822145.1;Name=WP_000822145.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462812.1;locus_tag=CCO40_RS22000;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_000822145.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4605963 4607225 . - . ID=gene-CCO40_RS22005;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=CCO40_RS22005;old_locus_tag=CCO40_22005 NZ_CP075116.1 Protein Homology CDS 4605963 4607225 . - 0 ID=cds-WP_000011227.1;Parent=gene-CCO40_RS22005;Dbxref=GenBank:WP_000011227.1;Name=WP_000011227.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=CCO40_RS22005;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_000011227.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4607222 4608352 . - . ID=gene-CCO40_RS22010;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=CCO40_RS22010;old_locus_tag=CCO40_22010 NZ_CP075116.1 Protein Homology CDS 4607222 4608352 . - 0 ID=cds-WP_000866685.1;Parent=gene-CCO40_RS22010;Dbxref=GenBank:WP_000866685.1;Name=WP_000866685.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=CCO40_RS22010;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_000866685.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4608408 4609454 . - . ID=gene-CCO40_RS22015;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=CCO40_RS22015;old_locus_tag=CCO40_22015 NZ_CP075116.1 Protein Homology CDS 4608408 4609454 . - 0 ID=cds-WP_000193413.1;Parent=gene-CCO40_RS22015;Dbxref=GenBank:WP_000193413.1;Name=WP_000193413.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=CCO40_RS22015;product=ECA polysaccharide chain length modulation protein;protein_id=WP_000193413.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4609466 4610569 . - . ID=gene-CCO40_RS22020;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=CCO40_RS22020;old_locus_tag=CCO40_22020 NZ_CP075116.1 Protein Homology CDS 4609466 4610569 . - 0 ID=cds-WP_000771937.1;Parent=gene-CCO40_RS22020;Dbxref=GenBank:WP_000771937.1;Name=WP_000771937.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462808.1;locus_tag=CCO40_RS22020;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_000771937.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4610799 4612058 . - . ID=gene-CCO40_RS22025;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=CCO40_RS22025;old_locus_tag=CCO40_22025 NZ_CP075116.1 Protein Homology CDS 4610799 4612058 . - 0 ID=cds-WP_001054532.1;Parent=gene-CCO40_RS22025;Dbxref=GenBank:WP_001054532.1;Name=WP_001054532.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=CCO40_RS22025;product=transcription termination factor Rho;protein_id=WP_001054532.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4612146 4612229 . - . ID=gene-CCO40_RS22595;Name=CCO40_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22595 NZ_CP075116.1 Protein Homology CDS 4612146 4612229 . - 0 ID=cds-WP_134820045.1;Parent=gene-CCO40_RS22595;Dbxref=GenBank:WP_134820045.1;Name=WP_134820045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=CCO40_RS22595;product=rho operon leader peptide;protein_id=WP_134820045.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4612477 4612806 . - . ID=gene-CCO40_RS22035;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=CCO40_RS22035;old_locus_tag=CCO40_22035 NZ_CP075116.1 Protein Homology CDS 4612477 4612806 . - 0 ID=cds-WP_001280776.1;Parent=gene-CCO40_RS22035;Dbxref=GenBank:WP_001280776.1;Name=WP_001280776.1;Ontology_term=GO:0045454,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=CCO40_RS22035;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4612950 4614215 . + . ID=gene-CCO40_RS22040;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=CCO40_RS22040;old_locus_tag=CCO40_22040 NZ_CP075116.1 Protein Homology CDS 4612950 4614215 . + 0 ID=cds-WP_000047525.1;Parent=gene-CCO40_RS22040;Dbxref=GenBank:WP_000047525.1;Name=WP_000047525.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462805.1;locus_tag=CCO40_RS22040;product=ATP-dependent RNA helicase RhlB;protein_id=WP_000047525.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4614334 4615815 . + . ID=gene-CCO40_RS22045;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=CCO40_RS22045;old_locus_tag=CCO40_22045 NZ_CP075116.1 Protein Homology CDS 4614334 4615815 . + 0 ID=cds-WP_094889338.1;Parent=gene-CCO40_RS22045;Dbxref=GenBank:WP_094889338.1;Name=WP_094889338.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462804.1;locus_tag=CCO40_RS22045;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_094889338.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4615855 4617879 . - . ID=gene-CCO40_RS22050;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=CCO40_RS22050;old_locus_tag=CCO40_22050 NZ_CP075116.1 Protein Homology CDS 4615855 4617879 . - 0 ID=cds-WP_001238842.1;Parent=gene-CCO40_RS22050;Dbxref=GenBank:WP_001238842.1;Name=WP_001238842.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462803.1;locus_tag=CCO40_RS22050;product=DNA helicase Rep;protein_id=WP_001238842.1;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 4617979 4618116 . - . ID=gene-CCO40_RS22055;Name=CCO40_RS22055;end_range=4618116,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22055;old_locus_tag=CCO40_22055;partial=true;pseudo=true NZ_CP075116.1 Protein Homology CDS 4617979 4618116 . - 0 ID=cds-CCO40_RS22055;Parent=gene-CCO40_RS22055;Note=involved in nicotinamide riboside transport%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4618116,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506088.1;locus_tag=CCO40_RS22055;partial=true;product=nicotinamide riboside transporter PnuC;pseudo=true;transl_table=11 NZ_CP075116.1 RefSeq pseudogene 4618068 4618223 . - . ID=gene-CCO40_RS22650;Name=CCO40_RS22650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CCO40_RS22650;partial=true;pseudo=true;start_range=.,4618068 NZ_CP075116.1 Protein Homology CDS 4618068 4618223 . - 0 ID=cds-CCO40_RS22650;Parent=gene-CCO40_RS22650;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442089.1;locus_tag=CCO40_RS22650;partial=true;product=Crp/Fnr family transcriptional regulator;pseudo=true;start_range=.,4618068;transl_table=11 NZ_CP075116.1 RefSeq gene 4618417 4618698 . + . ID=gene-CCO40_RS22060;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=CCO40_RS22060;old_locus_tag=CCO40_22060 NZ_CP075116.1 Protein Homology CDS 4618417 4618698 . + 0 ID=cds-WP_001096806.1;Parent=gene-CCO40_RS22060;Dbxref=GenBank:WP_001096806.1;Name=WP_001096806.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462801.1;locus_tag=CCO40_RS22060;product=peptidylprolyl isomerase PpiC;protein_id=WP_001096806.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4618736 4620211 . - . ID=gene-CCO40_RS22065;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=CCO40_RS22065;old_locus_tag=CCO40_22065 NZ_CP075116.1 Protein Homology CDS 4618736 4620211 . - 0 ID=cds-WP_000024932.1;Parent=gene-CCO40_RS22065;Dbxref=GenBank:WP_000024932.1;Name=WP_000024932.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=CCO40_RS22065;product=ketol-acid reductoisomerase;protein_id=WP_000024932.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4620375 4621262 . + . ID=gene-CCO40_RS22070;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=CCO40_RS22070;old_locus_tag=CCO40_22070 NZ_CP075116.1 Protein Homology CDS 4620375 4621262 . + 0 ID=cds-WP_000365798.1;Parent=gene-CCO40_RS22070;Dbxref=GenBank:WP_000365798.1;Name=WP_000365798.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462799.1;locus_tag=CCO40_RS22070;product=HTH-type transcriptional activator IlvY;protein_id=WP_000365798.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4621265 4621606 . - . ID=gene-CCO40_RS22075;Name=CCO40_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22075;old_locus_tag=CCO40_22075 NZ_CP075116.1 Protein Homology CDS 4621265 4621606 . - 0 ID=cds-WP_000560824.1;Parent=gene-CCO40_RS22075;Dbxref=GenBank:WP_000560824.1;Name=WP_000560824.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462798.1;locus_tag=CCO40_RS22075;product=helix-turn-helix domain-containing protein;protein_id=WP_000560824.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4621603 4621920 . - . ID=gene-CCO40_RS22080;Name=CCO40_RS22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22080;old_locus_tag=CCO40_22080 NZ_CP075116.1 Protein Homology CDS 4621603 4621920 . - 0 ID=cds-WP_000535852.1;Parent=gene-CCO40_RS22080;Dbxref=GenBank:WP_000535852.1;Name=WP_000535852.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462797.1;locus_tag=CCO40_RS22080;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000535852.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4622203 4623747 . - . ID=gene-CCO40_RS22085;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=CCO40_RS22085;old_locus_tag=CCO40_22085 NZ_CP075116.1 Protein Homology CDS 4622203 4623747 . - 0 ID=cds-WP_001518457.1;Parent=gene-CCO40_RS22085;Dbxref=GenBank:WP_001518457.1;Name=WP_001518457.1;Ontology_term=GO:1901705,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=L-isoleucine biosynthetic process|1901705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462796.1;locus_tag=CCO40_RS22085;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_001518457.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4623750 4625600 . - . ID=gene-CCO40_RS22090;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=CCO40_RS22090;old_locus_tag=CCO40_22090 NZ_CP075116.1 Protein Homology CDS 4623750 4625600 . - 0 ID=cds-WP_001127434.1;Parent=gene-CCO40_RS22090;Dbxref=GenBank:WP_001127434.1;Name=WP_001127434.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=CCO40_RS22090;product=dihydroxy-acid dehydratase;protein_id=WP_001127434.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4625761 4626690 . - . ID=gene-CCO40_RS22095;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=CCO40_RS22095;old_locus_tag=CCO40_22095 NZ_CP075116.1 Protein Homology CDS 4625761 4626690 . - 0 ID=cds-WP_000208528.1;Parent=gene-CCO40_RS22095;Dbxref=GenBank:WP_000208528.1;Name=WP_000208528.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid:2-oxoglutarate transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462794.1;locus_tag=CCO40_RS22095;product=branched-chain-amino-acid transaminase;protein_id=WP_000208528.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4626708 4626971 . - . ID=gene-CCO40_RS22100;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=CCO40_RS22100;old_locus_tag=CCO40_22100 NZ_CP075116.1 Protein Homology CDS 4626708 4626971 . - 0 ID=cds-WP_000983260.1;Parent=gene-CCO40_RS22100;Dbxref=GenBank:WP_000983260.1;Name=WP_000983260.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=CCO40_RS22100;product=acetolactate synthase 2 small subunit;protein_id=WP_000983260.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4626968 4628614 . - . ID=gene-CCO40_RS22105;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=CCO40_RS22105;old_locus_tag=CCO40_22105 NZ_CP075116.1 Protein Homology CDS 4626968 4628614 . - 0 ID=cds-WP_001012554.1;Parent=gene-CCO40_RS22105;Dbxref=GenBank:WP_001012554.1;Name=WP_001012554.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=CCO40_RS22105;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_001012554.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4628617 4628667 . - . ID=gene-CCO40_RS22110;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=CCO40_RS22110;old_locus_tag=CCO40_22110 NZ_CP075116.1 Protein Homology CDS 4628617 4628667 . - 0 ID=cds-WP_192930503.1;Parent=gene-CCO40_RS22110;Dbxref=GenBank:WP_192930503.1;Name=WP_192930503.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791259.1;locus_tag=CCO40_RS22110;product=peptide IlvX;protein_id=WP_192930503.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4628754 4628852 . - . ID=gene-CCO40_RS22115;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=CCO40_RS22115;old_locus_tag=CCO40_22115 NZ_CP075116.1 Protein Homology CDS 4628754 4628852 . - 0 ID=cds-WP_001311244.1;Parent=gene-CCO40_RS22115;Dbxref=GenBank:WP_001311244.1;Name=WP_001311244.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=CCO40_RS22115;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4629204 4630724 . + . ID=gene-CCO40_RS22120;Name=CCO40_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22120;old_locus_tag=CCO40_22120 NZ_CP075116.1 Protein Homology CDS 4629204 4630724 . + 0 ID=cds-WP_000050215.1;Parent=gene-CCO40_RS22120;Dbxref=GenBank:WP_000050215.1;Name=WP_000050215.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=CCO40_RS22120;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_000050215.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4630749 4631087 . - . ID=gene-CCO40_RS22125;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=CCO40_RS22125;old_locus_tag=CCO40_22125 NZ_CP075116.1 Protein Homology CDS 4630749 4631087 . - 0 ID=cds-WP_000840996.1;Parent=gene-CCO40_RS22125;Dbxref=GenBank:WP_000840996.1;Name=WP_000840996.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462789.1;locus_tag=CCO40_RS22125;product=macrodomain Ori organization protein MaoP;protein_id=WP_000840996.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4631194 4632042 . + . ID=gene-CCO40_RS22130;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=CCO40_RS22130;old_locus_tag=CCO40_22130 NZ_CP075116.1 Protein Homology CDS 4631194 4632042 . + 0 ID=cds-WP_001541181.1;Parent=gene-CCO40_RS22130;Dbxref=GenBank:WP_001541181.1;Name=WP_001541181.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=CCO40_RS22130;product=HTH-type transcriptional regulator HdfR;protein_id=WP_001541181.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4632144 4632219 . - . ID=gene-CCO40_RS22135;Name=CCO40_RS22135;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS22135;old_locus_tag=CCO40_22135 NZ_CP075116.1 tRNAscan-SE tRNA 4632144 4632219 . - . ID=rna-CCO40_RS22135;Parent=gene-CCO40_RS22135;anticodon=(pos:complement(4632184..4632186));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS22135;product=tRNA-Trp NZ_CP075116.1 tRNAscan-SE exon 4632144 4632219 . - . ID=exon-CCO40_RS22135-1;Parent=rna-CCO40_RS22135;anticodon=(pos:complement(4632184..4632186));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS22135;product=tRNA-Trp NZ_CP075116.1 RefSeq gene 4632228 4632304 . - . ID=gene-CCO40_RS22140;Name=CCO40_RS22140;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS22140;old_locus_tag=CCO40_22140 NZ_CP075116.1 tRNAscan-SE tRNA 4632228 4632304 . - . ID=rna-CCO40_RS22140;Parent=gene-CCO40_RS22140;anticodon=(pos:complement(4632268..4632270));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS22140;product=tRNA-Asp NZ_CP075116.1 tRNAscan-SE exon 4632228 4632304 . - . ID=exon-CCO40_RS22140-1;Parent=rna-CCO40_RS22140;anticodon=(pos:complement(4632268..4632270));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS22140;product=tRNA-Asp NZ_CP075116.1 RefSeq gene 4632359 4632474 . - . ID=gene-CCO40_RS22145;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CCO40_RS22145;old_locus_tag=CCO40_22145 NZ_CP075116.1 cmsearch rRNA 4632359 4632474 . - . ID=rna-CCO40_RS22145;Parent=gene-CCO40_RS22145;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS22145;product=5S ribosomal RNA NZ_CP075116.1 cmsearch exon 4632359 4632474 . - . ID=exon-CCO40_RS22145-1;Parent=rna-CCO40_RS22145;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00001,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS22145;product=5S ribosomal RNA NZ_CP075116.1 RefSeq gene 4632568 4635559 . - . ID=gene-CCO40_RS22150;Name=CCO40_RS22150;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO40_RS22150;old_locus_tag=CCO40_22150 NZ_CP075116.1 cmsearch rRNA 4632568 4635559 . - . ID=rna-CCO40_RS22150;Parent=gene-CCO40_RS22150;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS22150;product=23S ribosomal RNA NZ_CP075116.1 cmsearch exon 4632568 4635559 . - . ID=exon-CCO40_RS22150-1;Parent=rna-CCO40_RS22150;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF02541,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS22150;product=23S ribosomal RNA NZ_CP075116.1 RefSeq gene 4635751 4635826 . - . ID=gene-CCO40_RS22155;Name=CCO40_RS22155;gbkey=Gene;gene_biotype=tRNA;locus_tag=CCO40_RS22155;old_locus_tag=CCO40_22155 NZ_CP075116.1 tRNAscan-SE tRNA 4635751 4635826 . - . ID=rna-CCO40_RS22155;Parent=gene-CCO40_RS22155;anticodon=(pos:complement(4635790..4635792));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS22155;product=tRNA-Glu NZ_CP075116.1 tRNAscan-SE exon 4635751 4635826 . - . ID=exon-CCO40_RS22155-1;Parent=rna-CCO40_RS22155;anticodon=(pos:complement(4635790..4635792));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CCO40_RS22155;product=tRNA-Glu NZ_CP075116.1 RefSeq gene 4635912 4637453 . - . ID=gene-CCO40_RS22160;Name=CCO40_RS22160;gbkey=Gene;gene_biotype=rRNA;locus_tag=CCO40_RS22160;old_locus_tag=CCO40_22160 NZ_CP075116.1 cmsearch rRNA 4635912 4637453 . - . ID=rna-CCO40_RS22160;Parent=gene-CCO40_RS22160;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS22160;product=16S ribosomal RNA NZ_CP075116.1 cmsearch exon 4635912 4637453 . - . ID=exon-CCO40_RS22160-1;Parent=rna-CCO40_RS22160;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: nucleotide motif:Rfam:15.0:RF00177,COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CCO40_RS22160;product=16S ribosomal RNA NZ_CP075116.1 RefSeq gene 4637934 4638638 . + . ID=gene-CCO40_RS22165;Name=CCO40_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22165;old_locus_tag=CCO40_22165 NZ_CP075116.1 Protein Homology CDS 4637934 4638638 . + 0 ID=cds-WP_001131148.1;Parent=gene-CCO40_RS22165;Dbxref=GenBank:WP_001131148.1;Name=WP_001131148.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462787.1;locus_tag=CCO40_RS22165;product=FadR/GntR family transcriptional regulator;protein_id=WP_001131148.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4638650 4640077 . + . ID=gene-CCO40_RS22170;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=CCO40_RS22170;old_locus_tag=CCO40_22170 NZ_CP075116.1 Protein Homology CDS 4638650 4640077 . + 0 ID=cds-WP_000202071.1;Parent=gene-CCO40_RS22170;Dbxref=GenBank:WP_000202071.1;Name=WP_000202071.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462786.1;locus_tag=CCO40_RS22170;product=multidrug transporter subunit MdtD;protein_id=WP_000202071.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4640043 4641041 . - . ID=gene-CCO40_RS22175;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=CCO40_RS22175;old_locus_tag=CCO40_22175 NZ_CP075116.1 Protein Homology CDS 4640043 4641041 . - 0 ID=cds-WP_000224491.1;Parent=gene-CCO40_RS22175;Dbxref=GenBank:WP_000224491.1;Name=WP_000224491.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462785.1;locus_tag=CCO40_RS22175;product=ribose operon transcriptional repressor RbsR;protein_id=WP_000224491.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4641045 4641974 . - . ID=gene-CCO40_RS22180;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=CCO40_RS22180;old_locus_tag=CCO40_22180 NZ_CP075116.1 Protein Homology CDS 4641045 4641974 . - 0 ID=cds-WP_000844728.1;Parent=gene-CCO40_RS22180;Dbxref=GenBank:WP_000844728.1;Name=WP_000844728.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462784.1;locus_tag=CCO40_RS22180;product=ribokinase;protein_id=WP_000844728.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4642108 4642998 . - . ID=gene-CCO40_RS22185;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=CCO40_RS22185;old_locus_tag=CCO40_22185 NZ_CP075116.1 Protein Homology CDS 4642108 4642998 . - 0 ID=cds-WP_001056260.1;Parent=gene-CCO40_RS22185;Dbxref=GenBank:WP_001056260.1;Name=WP_001056260.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462783.1;locus_tag=CCO40_RS22185;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_001056260.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4643023 4643988 . - . ID=gene-CCO40_RS22190;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=CCO40_RS22190;old_locus_tag=CCO40_22190 NZ_CP075116.1 Protein Homology CDS 4643023 4643988 . - 0 ID=cds-WP_000211345.1;Parent=gene-CCO40_RS22190;Dbxref=GenBank:WP_000211345.1;Name=WP_000211345.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=CCO40_RS22190;product=ribose ABC transporter permease;protein_id=WP_000211345.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4643994 4645499 . - . ID=gene-CCO40_RS22195;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=CCO40_RS22195;old_locus_tag=CCO40_22195 NZ_CP075116.1 Protein Homology CDS 4643994 4645499 . - 0 ID=cds-WP_000339359.1;Parent=gene-CCO40_RS22195;Dbxref=GenBank:WP_000339359.1;Name=WP_000339359.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462781.1;locus_tag=CCO40_RS22195;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_000339359.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4645507 4645926 . - . ID=gene-CCO40_RS22200;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=CCO40_RS22200;old_locus_tag=CCO40_22200 NZ_CP075116.1 Protein Homology CDS 4645507 4645926 . - 0 ID=cds-WP_000715944.1;Parent=gene-CCO40_RS22200;Dbxref=GenBank:WP_000715944.1;Name=WP_000715944.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462780.1;locus_tag=CCO40_RS22200;product=D-ribose pyranase;protein_id=WP_000715944.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4646123 4647991 . - . ID=gene-CCO40_RS22205;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=CCO40_RS22205;old_locus_tag=CCO40_22205 NZ_CP075116.1 Protein Homology CDS 4646123 4647991 . - 0 ID=cds-WP_000102338.1;Parent=gene-CCO40_RS22205;Dbxref=GenBank:WP_000102338.1;Name=WP_000102338.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=CCO40_RS22205;product=low affinity potassium transporter Kup;protein_id=WP_000102338.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4648339 4649835 . + . ID=gene-CCO40_RS22210;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=CCO40_RS22210;old_locus_tag=CCO40_22210 NZ_CP075116.1 Protein Homology CDS 4648339 4649835 . + 0 ID=cds-WP_000940987.1;Parent=gene-CCO40_RS22210;Dbxref=GenBank:WP_000940987.1;Name=WP_000940987.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462778.1;locus_tag=CCO40_RS22210;product=ATPase RavA;protein_id=WP_000940987.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4649829 4651280 . + . ID=gene-CCO40_RS22215;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=CCO40_RS22215;old_locus_tag=CCO40_22215 NZ_CP075116.1 Protein Homology CDS 4649829 4651280 . + 0 ID=cds-WP_000956582.1;Parent=gene-CCO40_RS22215;Dbxref=GenBank:WP_000956582.1;Name=WP_000956582.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=CCO40_RS22215;product=ATPase RavA stimulator ViaA;protein_id=WP_000956582.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4651285 4652277 . - . ID=gene-CCO40_RS22220;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=CCO40_RS22220;old_locus_tag=CCO40_22220 NZ_CP075116.1 Protein Homology CDS 4651285 4652277 . - 0 ID=cds-WP_000845123.1;Parent=gene-CCO40_RS22220;Dbxref=GenBank:WP_000845123.1;Name=WP_000845123.1;Ontology_term=GO:0070981,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=L-asparagine biosynthetic process|0070981||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=CCO40_RS22220;product=aspartate--ammonia ligase;protein_id=WP_000845123.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4652428 4652886 . + . ID=gene-CCO40_RS22225;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=CCO40_RS22225;old_locus_tag=CCO40_22225 NZ_CP075116.1 Protein Homology CDS 4652428 4652886 . + 0 ID=cds-WP_000433018.1;Parent=gene-CCO40_RS22225;Dbxref=GenBank:WP_000433018.1;Name=WP_000433018.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462775.1;locus_tag=CCO40_RS22225;product=transcriptional regulator AsnC;protein_id=WP_000433018.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4652976 4653419 . + . ID=gene-CCO40_RS22230;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=CCO40_RS22230;old_locus_tag=CCO40_22230 NZ_CP075116.1 Protein Homology CDS 4652976 4653419 . + 0 ID=cds-WP_000763722.1;Parent=gene-CCO40_RS22230;Dbxref=GenBank:WP_000763722.1;Name=WP_000763722.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462774.1;locus_tag=CCO40_RS22230;product=FMN-binding protein MioC;protein_id=WP_000763722.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4653798 4655687 . + . ID=gene-CCO40_RS22235;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=CCO40_RS22235;old_locus_tag=CCO40_22235 NZ_CP075116.1 Protein Homology CDS 4653798 4655687 . + 0 ID=cds-WP_000499872.1;Parent=gene-CCO40_RS22235;Dbxref=GenBank:WP_000499872.1;Name=WP_000499872.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=CCO40_RS22235;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_000499872.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4655790 4656413 . + . ID=gene-CCO40_RS22240;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=CCO40_RS22240;old_locus_tag=CCO40_22240 NZ_CP075116.1 Protein Homology CDS 4655790 4656413 . + 0 ID=cds-WP_001519938.1;Parent=gene-CCO40_RS22240;Dbxref=GenBank:WP_001519938.1;Name=WP_001519938.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462772.3;locus_tag=CCO40_RS22240;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_001519938.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4657029 4657409 . + . ID=gene-CCO40_RS22245;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=CCO40_RS22245;old_locus_tag=CCO40_22245 NZ_CP075116.1 Protein Homology CDS 4657029 4657409 . + 0 ID=cds-WP_000116685.1;Parent=gene-CCO40_RS22245;Dbxref=GenBank:WP_000116685.1;Name=WP_000116685.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462771.1;locus_tag=CCO40_RS22245;product=F0F1 ATP synthase subunit I;protein_id=WP_000116685.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4657418 4658233 . + . ID=gene-CCO40_RS22250;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=CCO40_RS22250;old_locus_tag=CCO40_22250 NZ_CP075116.1 Protein Homology CDS 4657418 4658233 . + 0 ID=cds-WP_000135632.1;Parent=gene-CCO40_RS22250;Dbxref=GenBank:WP_000135632.1;Name=WP_000135632.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=CCO40_RS22250;product=F0F1 ATP synthase subunit A;protein_id=WP_000135632.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4658280 4658519 . + . ID=gene-CCO40_RS22255;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=CCO40_RS22255;old_locus_tag=CCO40_22255 NZ_CP075116.1 Protein Homology CDS 4658280 4658519 . + 0 ID=cds-WP_000429386.1;Parent=gene-CCO40_RS22255;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=CCO40_RS22255;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4658579 4659049 . + . ID=gene-CCO40_RS22260;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=CCO40_RS22260;old_locus_tag=CCO40_22260 NZ_CP075116.1 Protein Homology CDS 4658579 4659049 . + 0 ID=cds-WP_001052212.1;Parent=gene-CCO40_RS22260;Dbxref=GenBank:WP_001052212.1;Name=WP_001052212.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=CCO40_RS22260;product=F0F1 ATP synthase subunit B;protein_id=WP_001052212.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4659064 4659597 . + . ID=gene-CCO40_RS22265;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=CCO40_RS22265;old_locus_tag=CCO40_22265 NZ_CP075116.1 Protein Homology CDS 4659064 4659597 . + 0 ID=cds-WP_001288957.1;Parent=gene-CCO40_RS22265;Dbxref=GenBank:WP_001288957.1;Name=WP_001288957.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=CCO40_RS22265;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288957.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4659610 4661151 . + . ID=gene-CCO40_RS22270;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=CCO40_RS22270;old_locus_tag=CCO40_22270 NZ_CP075116.1 Protein Homology CDS 4659610 4661151 . + 0 ID=cds-WP_001176751.1;Parent=gene-CCO40_RS22270;Dbxref=GenBank:WP_001176751.1;Name=WP_001176751.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=CCO40_RS22270;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176751.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4661202 4662065 . + . ID=gene-CCO40_RS22275;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=CCO40_RS22275;old_locus_tag=CCO40_22275 NZ_CP075116.1 Protein Homology CDS 4661202 4662065 . + 0 ID=cds-WP_000896506.1;Parent=gene-CCO40_RS22275;Dbxref=GenBank:WP_000896506.1;Name=WP_000896506.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=CCO40_RS22275;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000896506.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4662092 4663474 . + . ID=gene-CCO40_RS22280;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=CCO40_RS22280;old_locus_tag=CCO40_22280 NZ_CP075116.1 Protein Homology CDS 4662092 4663474 . + 0 ID=cds-WP_000190499.1;Parent=gene-CCO40_RS22280;Dbxref=GenBank:WP_000190499.1;Name=WP_000190499.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=CCO40_RS22280;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190499.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4663495 4663914 . + . ID=gene-CCO40_RS22285;Name=CCO40_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22285;old_locus_tag=CCO40_22285 NZ_CP075116.1 Protein Homology CDS 4663495 4663914 . + 0 ID=cds-WP_001251971.1;Parent=gene-CCO40_RS22285;Dbxref=GenBank:WP_001251971.1;Name=WP_001251971.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=CCO40_RS22285;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251971.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4664144 4664842 . + . ID=gene-CCO40_RS22290;Name=CCO40_RS22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22290;old_locus_tag=CCO40_22290 NZ_CP075116.1 Protein Homology CDS 4664144 4664842 . + 0 ID=cds-WP_000009908.1;Parent=gene-CCO40_RS22290;Dbxref=GenBank:WP_000009908.1;Name=WP_000009908.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462762.1;locus_tag=CCO40_RS22290;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000009908.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4665162 4666532 . + . ID=gene-CCO40_RS22295;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=CCO40_RS22295;old_locus_tag=CCO40_22295 NZ_CP075116.1 Protein Homology CDS 4665162 4666532 . + 0 ID=cds-WP_000934851.1;Parent=gene-CCO40_RS22295;Dbxref=GenBank:WP_000934851.1;Name=WP_000934851.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462761.1;locus_tag=CCO40_RS22295;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000934851.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4666721 4668550 . + . ID=gene-CCO40_RS22300;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=CCO40_RS22300;old_locus_tag=CCO40_22300 NZ_CP075116.1 Protein Homology CDS 4666721 4668550 . + 0 ID=cds-WP_000334052.1;Parent=gene-CCO40_RS22300;Dbxref=GenBank:WP_000334052.1;Name=WP_000334052.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=L-glutamine:D-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=CCO40_RS22300;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_000334052.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4668701 4670458 . - . ID=gene-CCO40_RS22305;Name=CCO40_RS22305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22305;old_locus_tag=CCO40_22305 NZ_CP075116.1 Protein Homology CDS 4668701 4670458 . - 0 ID=cds-WP_076937702.1;Parent=gene-CCO40_RS22305;Dbxref=GenBank:WP_076937702.1;Name=WP_076937702.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462759.1;locus_tag=CCO40_RS22305;product=SgrR family transcriptional regulator;protein_id=WP_076937702.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4670553 4671371 . + . ID=gene-CCO40_RS22310;Name=CCO40_RS22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22310;old_locus_tag=CCO40_22310 NZ_CP075116.1 Protein Homology CDS 4670553 4671371 . + 0 ID=cds-WP_064044128.1;Parent=gene-CCO40_RS22310;Dbxref=GenBank:WP_064044128.1;Name=WP_064044128.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462758.1;locus_tag=CCO40_RS22310;product=shikimate 5-dehydrogenase;protein_id=WP_064044128.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4671420 4672793 . + . ID=gene-CCO40_RS22315;Name=CCO40_RS22315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22315;old_locus_tag=CCO40_22315 NZ_CP075116.1 Protein Homology CDS 4671420 4672793 . + 0 ID=cds-WP_050067758.1;Parent=gene-CCO40_RS22315;Dbxref=GenBank:WP_050067758.1;Name=WP_050067758.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=CCO40_RS22315;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_050067758.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4672960 4674000 . + . ID=gene-CCO40_RS22320;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=CCO40_RS22320;old_locus_tag=CCO40_22320 NZ_CP075116.1 Protein Homology CDS 4672960 4674000 . + 0 ID=cds-WP_000867131.1;Parent=gene-CCO40_RS22320;Dbxref=GenBank:WP_000867131.1;Name=WP_000867131.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=CCO40_RS22320;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867131.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4674136 4675095 . + . ID=gene-CCO40_RS22325;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=CCO40_RS22325;old_locus_tag=CCO40_22325 NZ_CP075116.1 Protein Homology CDS 4674136 4675095 . + 0 ID=cds-WP_000741630.1;Parent=gene-CCO40_RS22325;Dbxref=GenBank:WP_000741630.1;Name=WP_000741630.1;Ontology_term=GO:0006817,GO:0055085,GO:0005315,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=CCO40_RS22325;product=phosphate ABC transporter permease PstC;protein_id=WP_000741630.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4675095 4675985 . + . ID=gene-CCO40_RS22330;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=CCO40_RS22330;old_locus_tag=CCO40_22330 NZ_CP075116.1 Protein Homology CDS 4675095 4675985 . + 0 ID=cds-WP_000212197.1;Parent=gene-CCO40_RS22330;Dbxref=GenBank:WP_000212197.1;Name=WP_000212197.1;Ontology_term=GO:0035435,GO:0005315,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462754.1;locus_tag=CCO40_RS22330;product=phosphate ABC transporter permease PstA;protein_id=WP_000212197.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4676072 4676845 . + . ID=gene-CCO40_RS22335;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=CCO40_RS22335;old_locus_tag=CCO40_22335 NZ_CP075116.1 Protein Homology CDS 4676072 4676845 . + 0 ID=cds-WP_000063118.1;Parent=gene-CCO40_RS22335;Dbxref=GenBank:WP_000063118.1;Name=WP_000063118.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=CCO40_RS22335;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063118.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4676860 4677585 . + . ID=gene-CCO40_RS22340;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=CCO40_RS22340;old_locus_tag=CCO40_22340 NZ_CP075116.1 Protein Homology CDS 4676860 4677585 . + 0 ID=cds-WP_000377800.1;Parent=gene-CCO40_RS22340;Dbxref=GenBank:WP_000377800.1;Name=WP_000377800.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462752.1;locus_tag=CCO40_RS22340;product=phosphate signaling complex protein PhoU;protein_id=WP_000377800.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4677680 4678345 . - . ID=gene-CCO40_RS22345;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=CCO40_RS22345;old_locus_tag=CCO40_22345 NZ_CP075116.1 Protein Homology CDS 4677680 4678345 . - 0 ID=cds-WP_023234304.1;Parent=gene-CCO40_RS22345;Dbxref=GenBank:WP_023234304.1;Name=WP_023234304.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462751.1;locus_tag=CCO40_RS22345;product=6-phosphogluconate phosphatase;protein_id=WP_023234304.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4678514 4679851 . + . ID=gene-CCO40_RS22350;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=CCO40_RS22350;old_locus_tag=CCO40_22350 NZ_CP075116.1 Protein Homology CDS 4678514 4679851 . + 0 ID=cds-WP_001583487.1;Parent=gene-CCO40_RS22350;Dbxref=GenBank:WP_001583487.1;Name=WP_001583487.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=CCO40_RS22350;product=adenine permease AdeP;protein_id=WP_001583487.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4679896 4680480 . - . ID=gene-CCO40_RS22355;Name=CCO40_RS22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22355;old_locus_tag=CCO40_22355 NZ_CP075116.1 Protein Homology CDS 4679896 4680480 . - 0 ID=cds-WP_001521186.1;Parent=gene-CCO40_RS22355;Dbxref=GenBank:WP_001521186.1;Name=WP_001521186.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462749.3;locus_tag=CCO40_RS22355;product=NADPH-dependent FMN reductase;protein_id=WP_001521186.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4680480 4681235 . - . ID=gene-CCO40_RS22360;Name=CCO40_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22360;old_locus_tag=CCO40_22360 NZ_CP075116.1 Protein Homology CDS 4680480 4681235 . - 0 ID=cds-WP_000190678.1;Parent=gene-CCO40_RS22360;Dbxref=GenBank:WP_000190678.1;Name=WP_000190678.1;Ontology_term=GO:0008897;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462748.1;locus_tag=CCO40_RS22360;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_000190678.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4681393 4682352 . - . ID=gene-CCO40_RS22365;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=CCO40_RS22365;old_locus_tag=CCO40_22365 NZ_CP075116.1 Protein Homology CDS 4681393 4682352 . - 0 ID=cds-WP_094889345.1;Parent=gene-CCO40_RS22365;Dbxref=GenBank:WP_094889345.1;Name=WP_094889345.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=CCO40_RS22365;product=HTH-type transcriptional regulator YidZ;protein_id=WP_094889345.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4682321 4683508 . - . ID=gene-CCO40_RS22370;Name=CCO40_RS22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22370;old_locus_tag=CCO40_22370 NZ_CP075116.1 Protein Homology CDS 4682321 4683508 . - 0 ID=cds-WP_000819606.1;Parent=gene-CCO40_RS22370;Dbxref=GenBank:WP_000819606.1;Name=WP_000819606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462746.1;locus_tag=CCO40_RS22370;product=MFS transporter;protein_id=WP_000819606.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4683691 4685055 . - . ID=gene-CCO40_RS22375;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=CCO40_RS22375;old_locus_tag=CCO40_22375 NZ_CP075116.1 Protein Homology CDS 4683691 4685055 . - 0 ID=cds-WP_000019081.1;Parent=gene-CCO40_RS22375;Dbxref=GenBank:WP_000019081.1;Name=WP_000019081.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=CCO40_RS22375;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_000019081.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4685196 4686842 . - . ID=gene-CCO40_RS22380;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=CCO40_RS22380;old_locus_tag=CCO40_22380 NZ_CP075116.1 Protein Homology CDS 4685196 4686842 . - 0 ID=cds-WP_094889344.1;Parent=gene-CCO40_RS22380;Dbxref=GenBank:WP_094889344.1;Name=WP_094889344.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=CCO40_RS22380;product=membrane protein insertase YidC;protein_id=WP_094889344.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4686845 4687102 . - . ID=gene-CCO40_RS22385;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=CCO40_RS22385;old_locus_tag=CCO40_22385 NZ_CP075116.1 Protein Homology CDS 4686845 4687102 . - 0 ID=cds-WP_001307474.1;Parent=gene-CCO40_RS22385;Dbxref=GenBank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=CCO40_RS22385;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4687066 4687425 . - . ID=gene-CCO40_RS22390;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=CCO40_RS22390;old_locus_tag=CCO40_22390 NZ_CP075116.1 Protein Homology CDS 4687066 4687425 . - 0 ID=cds-WP_000239725.1;Parent=gene-CCO40_RS22390;Dbxref=GenBank:WP_000239725.1;Name=WP_000239725.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=CCO40_RS22390;product=ribonuclease P protein component;protein_id=WP_000239725.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4687442 4687582 . - . ID=gene-CCO40_RS22395;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=CCO40_RS22395;old_locus_tag=CCO40_22395 NZ_CP075116.1 Protein Homology CDS 4687442 4687582 . - 0 ID=cds-WP_000831330.1;Parent=gene-CCO40_RS22395;Dbxref=GenBank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=CCO40_RS22395;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 NZ_CP075116.1 RefSeq gene 4687811 4687903 . - . ID=gene-CCO40_RS22815;Name=CCO40_RS22815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CCO40_RS22815 NZ_CP075116.1 Protein Homology CDS 4687811 4687903 . - 0 ID=cds-WP_418142141.1;Parent=gene-CCO40_RS22815;Dbxref=GenBank:WP_418142141.1;Name=WP_418142141.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048187.2;locus_tag=CCO40_RS22815;product=hypothetical protein;protein_id=WP_418142141.1;transl_table=11 ###