##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build PDT001537098.3 #!genome-build-accession NCBI_Assembly:GCA_027055555.2 #!annotation-date 06/20/2026 20:09:09 #!annotation-source NCBI ##sequence-region DALFDJ020000001.1 1 400438 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000001.1 tpg region 1 400438 . + . ID=DALFDJ020000001.1:1..400438;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000001.1 tpg gene 143 258 . + . ID=gene-O5D79_000001;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=O5D79_000001 DALFDJ020000001.1 cmsearch rRNA 143 258 . + . ID=rna-O5D79_000001;Parent=gene-O5D79_000001;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_000001;product=5S ribosomal RNA DALFDJ020000001.1 cmsearch exon 143 258 . + . ID=exon-O5D79_000001-1;Parent=rna-O5D79_000001;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_000001;product=5S ribosomal RNA DALFDJ020000001.1 tpg gene 683 1138 . + . ID=gene-O5D79_000002;Name=O5D79_000002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000002 DALFDJ020000001.1 Protein Homology CDS 683 1138 . + 0 ID=cds-HJH9161587.1;Parent=gene-O5D79_000002;Dbxref=NCBI_GP:HJH9161587.1;Name=HJH9161587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461590.1;locus_tag=O5D79_000002;product=DUF4385 domain-containing protein;protein_id=HJH9161587.1;transl_table=11 DALFDJ020000001.1 tpg gene 1242 2543 . + . ID=gene-O5D79_000003;Name=O5D79_000003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000003 DALFDJ020000001.1 Protein Homology CDS 1242 2543 . + 0 ID=cds-HJH9161588.1;Parent=gene-O5D79_000003;Dbxref=NCBI_GP:HJH9161588.1;Name=HJH9161588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461589.1;locus_tag=O5D79_000003;product=MFS transporter;protein_id=HJH9161588.1;transl_table=11 DALFDJ020000001.1 tpg gene 2540 2863 . - . ID=gene-O5D79_000004;Name=O5D79_000004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000004 DALFDJ020000001.1 Protein Homology CDS 2540 2863 . - 0 ID=cds-HJH9161589.1;Parent=gene-O5D79_000004;Dbxref=NCBI_GP:HJH9161589.1;Name=HJH9161589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461588.1;locus_tag=O5D79_000004;product=YfiM family lipoprotein;protein_id=HJH9161589.1;transl_table=11 DALFDJ020000001.1 tpg gene 2908 4263 . - . ID=gene-O5D79_000005;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=O5D79_000005 DALFDJ020000001.1 Protein Homology CDS 2908 4263 . - 0 ID=cds-HJH9161590.1;Parent=gene-O5D79_000005;Dbxref=NCBI_GP:HJH9161590.1;Name=HJH9161590.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=O5D79_000005;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=HJH9161590.1;transl_table=11 DALFDJ020000001.1 tpg gene 4378 7038 . - . ID=gene-O5D79_000006;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=O5D79_000006 DALFDJ020000001.1 Protein Homology CDS 4378 7038 . - 0 ID=cds-HJH9161591.1;Parent=gene-O5D79_000006;Dbxref=NCBI_GP:HJH9161591.1;Name=HJH9161591.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461586.1;locus_tag=O5D79_000006;product=protein lysine acetyltransferase;protein_id=HJH9161591.1;transl_table=11 DALFDJ020000001.1 tpg gene 7092 7772 . - . ID=gene-O5D79_000007;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=O5D79_000007 DALFDJ020000001.1 Protein Homology CDS 7092 7772 . - 0 ID=cds-HJH9161592.1;Parent=gene-O5D79_000007;Dbxref=NCBI_GP:HJH9161592.1;Name=HJH9161592.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461585.1;locus_tag=O5D79_000007;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=HJH9161592.1;transl_table=11 DALFDJ020000001.1 tpg gene 7845 8264 . - . ID=gene-O5D79_000008;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=O5D79_000008 DALFDJ020000001.1 Protein Homology CDS 7845 8264 . - 0 ID=cds-HJH9161593.1;Parent=gene-O5D79_000008;Dbxref=NCBI_GP:HJH9161593.1;Name=HJH9161593.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=O5D79_000008;product=thioredoxin TrxC;protein_id=HJH9161593.1;transl_table=11 DALFDJ020000001.1 tpg gene 8468 9505 . + . ID=gene-O5D79_000009;Name=O5D79_000009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000009 DALFDJ020000001.1 Protein Homology CDS 8468 9505 . + 0 ID=cds-HJH9161594.1;Parent=gene-O5D79_000009;Dbxref=NCBI_GP:HJH9161594.1;Name=HJH9161594.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461583.1;locus_tag=O5D79_000009;product=tRNA/rRNA methyltransferase;protein_id=HJH9161594.1;transl_table=11 DALFDJ020000001.1 tpg gene 9621 10310 . - . ID=gene-O5D79_000010;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=O5D79_000010 DALFDJ020000001.1 Protein Homology CDS 9621 10310 . - 0 ID=cds-HJH9161595.1;Parent=gene-O5D79_000010;Dbxref=NCBI_GP:HJH9161595.1;Name=HJH9161595.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461582.1;locus_tag=O5D79_000010;product=uracil-DNA glycosylase;protein_id=HJH9161595.1;transl_table=11 DALFDJ020000001.1 tpg gene 10629 11012 . + . ID=gene-O5D79_000011;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=O5D79_000011 DALFDJ020000001.1 Protein Homology CDS 10629 11012 . + 0 ID=cds-HJH9161596.1;Parent=gene-O5D79_000011;Dbxref=NCBI_GP:HJH9161596.1;Name=HJH9161596.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=O5D79_000011;product=autonomous glycyl radical cofactor GrcA;protein_id=HJH9161596.1;transl_table=11 DALFDJ020000001.1 tpg gene 11074 11661 . - . ID=gene-O5D79_000012;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=O5D79_000012 DALFDJ020000001.1 Protein Homology CDS 11074 11661 . - 0 ID=cds-HJH9161597.1;Parent=gene-O5D79_000012;Dbxref=NCBI_GP:HJH9161597.1;Name=HJH9161597.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461580.1;locus_tag=O5D79_000012;product=cysteine/O-acetylserine transporter;protein_id=HJH9161597.1;transl_table=11 DALFDJ020000001.1 tpg gene 11764 12663 . + . ID=gene-O5D79_000013;Name=O5D79_000013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000013 DALFDJ020000001.1 Protein Homology CDS 11764 12663 . + 0 ID=cds-HJH9161598.1;Parent=gene-O5D79_000013;Dbxref=NCBI_GP:HJH9161598.1;Name=HJH9161598.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461579.1;locus_tag=O5D79_000013;product=LysR family transcriptional regulator;protein_id=HJH9161598.1;transl_table=11 DALFDJ020000001.1 tpg gene 12681 14015 . - . ID=gene-O5D79_000014;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=O5D79_000014 DALFDJ020000001.1 Protein Homology CDS 12681 14015 . - 0 ID=cds-HJH9161599.1;Parent=gene-O5D79_000014;Dbxref=NCBI_GP:HJH9161599.1;Name=HJH9161599.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461578.1;locus_tag=O5D79_000014;product=ATP-dependent RNA helicase SrmB;protein_id=HJH9161599.1;transl_table=11 DALFDJ020000001.1 tpg gene 14146 14883 . + . ID=gene-O5D79_000015;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=O5D79_000015 DALFDJ020000001.1 Protein Homology CDS 14146 14883 . + 0 ID=cds-HJH9161600.1;Parent=gene-O5D79_000015;Dbxref=NCBI_GP:HJH9161600.1;Name=HJH9161600.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461577.1;locus_tag=O5D79_000015;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=HJH9161600.1;transl_table=11 DALFDJ020000001.1 tpg gene 14868 16490 . - . ID=gene-O5D79_000016;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=O5D79_000016 DALFDJ020000001.1 Protein Homology CDS 14868 16490 . - 0 ID=cds-HJH9161601.1;Parent=gene-O5D79_000016;Dbxref=NCBI_GP:HJH9161601.1;Name=HJH9161601.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461576.1;locus_tag=O5D79_000016;product=L-aspartate oxidase;protein_id=HJH9161601.1;transl_table=11 DALFDJ020000001.1 tpg gene 16754 16918 . + . ID=gene-O5D79_000017;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=O5D79_000017 DALFDJ020000001.1 Protein Homology CDS 16754 16918 . + 0 ID=cds-HJH9161602.1;Parent=gene-O5D79_000017;Dbxref=NCBI_GP:HJH9161602.1;Name=HJH9161602.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344135.1;locus_tag=O5D79_000017;product=rpoE leader peptide RseD;protein_id=HJH9161602.1;transl_table=11 DALFDJ020000001.1 tpg gene 16915 17490 . + . ID=gene-O5D79_000018;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=O5D79_000018 DALFDJ020000001.1 Protein Homology CDS 16915 17490 . + 0 ID=cds-HJH9161603.1;Parent=gene-O5D79_000018;Dbxref=NCBI_GP:HJH9161603.1;Name=HJH9161603.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=O5D79_000018;product=RNA polymerase sigma factor RpoE;protein_id=HJH9161603.1;transl_table=11 DALFDJ020000001.1 tpg gene 17522 18172 . + . ID=gene-O5D79_000019;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=O5D79_000019 DALFDJ020000001.1 Protein Homology CDS 17522 18172 . + 0 ID=cds-HJH9161604.1;Parent=gene-O5D79_000019;Dbxref=NCBI_GP:HJH9161604.1;Name=HJH9161604.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=O5D79_000019;product=anti-sigma-E factor RseA;protein_id=HJH9161604.1;transl_table=11 DALFDJ020000001.1 tpg gene 18172 19128 . + . ID=gene-O5D79_000020;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=O5D79_000020 DALFDJ020000001.1 Protein Homology CDS 18172 19128 . + 0 ID=cds-HJH9161605.1;Parent=gene-O5D79_000020;Dbxref=NCBI_GP:HJH9161605.1;Name=HJH9161605.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461573.1;locus_tag=O5D79_000020;product=sigma-E factor regulatory protein RseB;protein_id=HJH9161605.1;transl_table=11 DALFDJ020000001.1 tpg gene 19125 19604 . + . ID=gene-O5D79_000021;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=O5D79_000021 DALFDJ020000001.1 Protein Homology CDS 19125 19604 . + 0 ID=cds-HJH9161606.1;Parent=gene-O5D79_000021;Dbxref=NCBI_GP:HJH9161606.1;Name=HJH9161606.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461572.1;locus_tag=O5D79_000021;product=SoxR-reducing system protein RseC;protein_id=HJH9161606.1;transl_table=11 DALFDJ020000001.1 tpg gene 19856 21655 . + . ID=gene-O5D79_000022;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=O5D79_000022 DALFDJ020000001.1 Protein Homology CDS 19856 21655 . + 0 ID=cds-HJH9161607.1;Parent=gene-O5D79_000022;Dbxref=NCBI_GP:HJH9161607.1;Name=HJH9161607.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461518.1;locus_tag=O5D79_000022;product=translation elongation factor 4;protein_id=HJH9161607.1;transl_table=11 DALFDJ020000001.1 tpg gene 21672 22646 . + . ID=gene-O5D79_000023;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=O5D79_000023 DALFDJ020000001.1 Protein Homology CDS 21672 22646 . + 0 ID=cds-HJH9161608.1;Parent=gene-O5D79_000023;Dbxref=NCBI_GP:HJH9161608.1;Name=HJH9161608.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461517.1;locus_tag=O5D79_000023;product=signal peptidase I;protein_id=HJH9161608.1;transl_table=11 DALFDJ020000001.1 tpg gene 22920 23600 . + . ID=gene-O5D79_000024;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=O5D79_000024 DALFDJ020000001.1 Protein Homology CDS 22920 23600 . + 0 ID=cds-HJH9161609.1;Parent=gene-O5D79_000024;Dbxref=NCBI_GP:HJH9161609.1;Name=HJH9161609.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=O5D79_000024;product=ribonuclease III;protein_id=HJH9161609.1;transl_table=11 DALFDJ020000001.1 tpg gene 23597 24502 . + . ID=gene-O5D79_000025;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=O5D79_000025 DALFDJ020000001.1 Protein Homology CDS 23597 24502 . + 0 ID=cds-HJH9161610.1;Parent=gene-O5D79_000025;Dbxref=NCBI_GP:HJH9161610.1;Name=HJH9161610.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461515.1;locus_tag=O5D79_000025;product=GTPase Era;protein_id=HJH9161610.1;transl_table=11 DALFDJ020000001.1 tpg gene 24514 25242 . + . ID=gene-O5D79_000026;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=O5D79_000026 DALFDJ020000001.1 Protein Homology CDS 24514 25242 . + 0 ID=cds-HJH9161611.1;Parent=gene-O5D79_000026;Dbxref=NCBI_GP:HJH9161611.1;Name=HJH9161611.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461514.1;locus_tag=O5D79_000026;product=DNA repair protein RecO;protein_id=HJH9161611.1;transl_table=11 DALFDJ020000001.1 tpg gene 25254 25985 . + . ID=gene-O5D79_000027;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=O5D79_000027 DALFDJ020000001.1 Protein Homology CDS 25254 25985 . + 0 ID=cds-HJH9161612.1;Parent=gene-O5D79_000027;Dbxref=NCBI_GP:HJH9161612.1;Name=HJH9161612.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461513.1;locus_tag=O5D79_000027;product=pyridoxine 5'-phosphate synthase;protein_id=HJH9161612.1;transl_table=11 DALFDJ020000001.1 tpg gene 25985 26365 . + . ID=gene-O5D79_000028;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=O5D79_000028 DALFDJ020000001.1 Protein Homology CDS 25985 26365 . + 0 ID=cds-HJH9161613.1;Parent=gene-O5D79_000028;Dbxref=NCBI_GP:HJH9161613.1;Name=HJH9161613.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461512.1;locus_tag=O5D79_000028;product=holo-ACP synthase;protein_id=HJH9161613.1;transl_table=11 DALFDJ020000001.1 tpg gene 26477 26737 . - . ID=gene-O5D79_000029;Name=O5D79_000029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000029 DALFDJ020000001.1 Protein Homology CDS 26477 26737 . - 0 ID=cds-HJH9161614.1;Parent=gene-O5D79_000029;Dbxref=NCBI_GP:HJH9161614.1;Name=HJH9161614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461511.1;locus_tag=O5D79_000029;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=HJH9161614.1;transl_table=11 DALFDJ020000001.1 tpg gene 26790 27701 . - . ID=gene-O5D79_000030;Name=O5D79_000030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000030 DALFDJ020000001.1 Protein Homology CDS 26790 27701 . - 0 ID=cds-HJH9161615.1;Parent=gene-O5D79_000030;Dbxref=NCBI_GP:HJH9161615.1;Name=HJH9161615.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001581956.1;locus_tag=O5D79_000030;product=LysR family transcriptional regulator;protein_id=HJH9161615.1;transl_table=11 DALFDJ020000001.1 tpg gene 27817 29013 . + . ID=gene-O5D79_000031;Name=O5D79_000031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000031 DALFDJ020000001.1 Protein Homology CDS 27817 29013 . + 0 ID=cds-HJH9161616.1;Parent=gene-O5D79_000031;Dbxref=NCBI_GP:HJH9161616.1;Name=HJH9161616.1;Ontology_term=GO:0015129;gbkey=CDS;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461509.1;locus_tag=O5D79_000031;product=L-lactate MFS transporter;protein_id=HJH9161616.1;transl_table=11 DALFDJ020000001.1 tpg gene 29035 29952 . + . ID=gene-O5D79_000032;Name=O5D79_000032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000032 DALFDJ020000001.1 Protein Homology CDS 29035 29952 . + 0 ID=cds-HJH9161617.1;Parent=gene-O5D79_000032;Dbxref=NCBI_GP:HJH9161617.1;Name=HJH9161617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461508.1;locus_tag=O5D79_000032;product=oxidoreductase;protein_id=HJH9161617.1;transl_table=11 DALFDJ020000001.1 tpg gene 29991 30839 . - . ID=gene-O5D79_000033;Name=O5D79_000033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000033 DALFDJ020000001.1 Protein Homology CDS 29991 30839 . - 0 ID=cds-HJH9161618.1;Parent=gene-O5D79_000033;Dbxref=NCBI_GP:HJH9161618.1;Name=HJH9161618.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=O5D79_000033;product=MurR/RpiR family transcriptional regulator;protein_id=HJH9161618.1;transl_table=11 DALFDJ020000001.1 tpg gene 30955 31848 . + . ID=gene-O5D79_000034;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=O5D79_000034 DALFDJ020000001.1 Protein Homology CDS 30955 31848 . + 0 ID=cds-HJH9161619.1;Parent=gene-O5D79_000034;Dbxref=NCBI_GP:HJH9161619.1;Name=HJH9161619.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461506.1;locus_tag=O5D79_000034;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=HJH9161619.1;transl_table=11 DALFDJ020000001.1 tpg gene 31859 33220 . + . ID=gene-O5D79_000035;Name=O5D79_000035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000035 DALFDJ020000001.1 Protein Homology CDS 31859 33220 . + 0 ID=cds-HJH9161620.1;Parent=gene-O5D79_000035;Dbxref=NCBI_GP:HJH9161620.1;Name=HJH9161620.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=O5D79_000035;product=PTS transporter subunit EIIC;protein_id=HJH9161620.1;transl_table=11 DALFDJ020000001.1 tpg gene 33224 33859 . + . ID=gene-O5D79_000036;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=O5D79_000036 DALFDJ020000001.1 Protein Homology CDS 33224 33859 . + 0 ID=cds-HJH9161621.1;Parent=gene-O5D79_000036;Dbxref=NCBI_GP:HJH9161621.1;Name=HJH9161621.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=O5D79_000036;product=phosphatidylglycerophosphatase C;protein_id=HJH9161621.1;transl_table=11 DALFDJ020000001.1 tpg gene 33884 34435 . + . ID=gene-O5D79_000037;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=O5D79_000037 DALFDJ020000001.1 Protein Homology CDS 33884 34435 . + 0 ID=cds-HJH9161622.1;Parent=gene-O5D79_000037;Dbxref=NCBI_GP:HJH9161622.1;Name=HJH9161622.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461503.1;locus_tag=O5D79_000037;product=tRNA adenosine(34) deaminase TadA;protein_id=HJH9161622.1;transl_table=11 DALFDJ020000001.1 tpg gene 34486 36030 . - . ID=gene-O5D79_000038;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=O5D79_000038 DALFDJ020000001.1 Protein Homology CDS 34486 36030 . - 0 ID=cds-HJH9161623.1;Parent=gene-O5D79_000038;Dbxref=NCBI_GP:HJH9161623.1;Name=HJH9161623.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461502.1;locus_tag=O5D79_000038;product=membrane-bound lytic murein transglycosylase MltF;protein_id=HJH9161623.1;transl_table=11 DALFDJ020000001.1 tpg gene 36031 36264 . - . ID=gene-O5D79_000039;Name=O5D79_000039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000039 DALFDJ020000001.1 Protein Homology CDS 36031 36264 . - 0 ID=cds-HJH9161624.1;Parent=gene-O5D79_000039;Dbxref=NCBI_GP:HJH9161624.1;Name=HJH9161624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461501.1;locus_tag=O5D79_000039;product=hypothetical protein;protein_id=HJH9161624.1;transl_table=11 DALFDJ020000001.1 tpg gene 36286 40173 . + . ID=gene-O5D79_000040;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=O5D79_000040 DALFDJ020000001.1 Protein Homology CDS 36286 40173 . + 0 ID=cds-HJH9161625.1;Parent=gene-O5D79_000040;Dbxref=NCBI_GP:HJH9161625.1;Name=HJH9161625.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461500.1;locus_tag=O5D79_000040;product=phosphoribosylformylglycinamidine synthase;protein_id=HJH9161625.1;transl_table=11 DALFDJ020000001.1 tpg gene 40823 42253 . + . ID=gene-O5D79_000041;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=O5D79_000041 DALFDJ020000001.1 Protein Homology CDS 40823 42253 . + 0 ID=cds-HJH9161626.1;Parent=gene-O5D79_000041;Dbxref=NCBI_GP:HJH9161626.1;Name=HJH9161626.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001676035.1;locus_tag=O5D79_000041;product=two component system sensor histidine kinase QseE/GlrK;protein_id=HJH9161626.1;transl_table=11 DALFDJ020000001.1 tpg gene 42255 43019 . + . ID=gene-O5D79_000042;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=O5D79_000042 DALFDJ020000001.1 Protein Homology CDS 42255 43019 . + 0 ID=cds-HJH9161627.1;Parent=gene-O5D79_000042;Dbxref=NCBI_GP:HJH9161627.1;Name=HJH9161627.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461498.1;locus_tag=O5D79_000042;product=two-component system QseEF-associated lipoprotein QseG;protein_id=HJH9161627.1;transl_table=11 DALFDJ020000001.1 tpg gene 43016 44353 . + . ID=gene-O5D79_000043;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=O5D79_000043 DALFDJ020000001.1 Protein Homology CDS 43016 44353 . + 0 ID=cds-HJH9161628.1;Parent=gene-O5D79_000043;Dbxref=NCBI_GP:HJH9161628.1;Name=HJH9161628.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461497.1;locus_tag=O5D79_000043;product=two-component system response regulator GlrR;protein_id=HJH9161628.1;transl_table=11 DALFDJ020000001.1 tpg gene 44430 44768 . + . ID=gene-O5D79_000044;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=O5D79_000044 DALFDJ020000001.1 Protein Homology CDS 44430 44768 . + 0 ID=cds-HJH9161629.1;Parent=gene-O5D79_000044;Dbxref=NCBI_GP:HJH9161629.1;Name=HJH9161629.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=O5D79_000044;product=nitrogen regulatory protein P-II;protein_id=HJH9161629.1;transl_table=11 DALFDJ020000001.1 tpg gene 44817 46277 . - . ID=gene-O5D79_000045;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=O5D79_000045 DALFDJ020000001.1 Protein Homology CDS 44817 46277 . - 0 ID=cds-HJH9161630.1;Parent=gene-O5D79_000045;Dbxref=NCBI_GP:HJH9161630.1;Name=HJH9161630.1;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461495.1;locus_tag=O5D79_000045;product=dipeptide permease DtpD;protein_id=HJH9161630.1;transl_table=11 DALFDJ020000001.1 tpg gene 46333 48477 . - . ID=gene-O5D79_000046;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=O5D79_000046 DALFDJ020000001.1 Protein Homology CDS 46333 48477 . - 0 ID=cds-HJH9161631.1;Parent=gene-O5D79_000046;Dbxref=NCBI_GP:HJH9161631.1;Name=HJH9161631.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461494.1;locus_tag=O5D79_000046;product=lysine decarboxylase CadA;protein_id=HJH9161631.1;transl_table=11 DALFDJ020000001.1 tpg gene 48560 49891 . - . ID=gene-O5D79_000047;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=O5D79_000047 DALFDJ020000001.1 Protein Homology CDS 48560 49891 . - 0 ID=cds-HJH9161632.1;Parent=gene-O5D79_000047;Dbxref=NCBI_GP:HJH9161632.1;Name=HJH9161632.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461493.1;locus_tag=O5D79_000047;product=cadaverine/lysine antiporter;protein_id=HJH9161632.1;transl_table=11 DALFDJ020000001.1 tpg gene 50252 51793 . - . ID=gene-O5D79_000048;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=O5D79_000048 DALFDJ020000001.1 Protein Homology CDS 50252 51793 . - 0 ID=cds-HJH9161633.1;Parent=gene-O5D79_000048;Dbxref=NCBI_GP:HJH9161633.1;Name=HJH9161633.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461492.1;locus_tag=O5D79_000048;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=HJH9161633.1;transl_table=11 DALFDJ020000001.1 tpg gene 51975 53165 . - . ID=gene-O5D79_000049;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=O5D79_000049 DALFDJ020000001.1 Protein Homology CDS 51975 53165 . - 0 ID=cds-HJH9161634.1;Parent=gene-O5D79_000049;Dbxref=NCBI_GP:HJH9161634.1;Name=HJH9161634.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461491.1;locus_tag=O5D79_000049;product=NO-inducible flavohemoprotein;protein_id=HJH9161634.1;transl_table=11 DALFDJ020000001.1 tpg gene 53490 54743 . + . ID=gene-O5D79_000050;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=O5D79_000050 DALFDJ020000001.1 Protein Homology CDS 53490 54743 . + 0 ID=cds-HJH9161635.1;Parent=gene-O5D79_000050;Dbxref=NCBI_GP:HJH9161635.1;Name=HJH9161635.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=O5D79_000050;product=serine hydroxymethyltransferase;protein_id=HJH9161635.1;transl_table=11 DALFDJ020000001.1 tpg gene 54939 56078 . + . ID=gene-O5D79_000051;Name=O5D79_000051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000051 DALFDJ020000001.1 Protein Homology CDS 54939 56078 . + 0 ID=cds-HJH9161636.1;Parent=gene-O5D79_000051;Dbxref=NCBI_GP:HJH9161636.1;Name=HJH9161636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461489.1;locus_tag=O5D79_000051;product=3-phenylpropionate MFS transporter;protein_id=HJH9161636.1;transl_table=11 DALFDJ020000001.1 tpg gene 56073 57350 . - . ID=gene-O5D79_000052;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=O5D79_000052 DALFDJ020000001.1 Protein Homology CDS 56073 57350 . - 0 ID=cds-HJH9161637.1;Parent=gene-O5D79_000052;Dbxref=NCBI_GP:HJH9161637.1;Name=HJH9161637.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461488.1;locus_tag=O5D79_000052;product=stationary phase inducible protein CsiE;protein_id=HJH9161637.1;transl_table=11 DALFDJ020000001.1 tpg gene 57476 58114 . + . ID=gene-O5D79_000053;Name=O5D79_000053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000053 DALFDJ020000001.1 Protein Homology CDS 57476 58114 . + 0 ID=cds-HJH9161638.1;Parent=gene-O5D79_000053;Dbxref=NCBI_GP:HJH9161638.1;Name=HJH9161638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461487.1;locus_tag=O5D79_000053;product=DUF1007 family protein;protein_id=HJH9161638.1;transl_table=11 DALFDJ020000001.1 tpg gene 58105 59091 . + . ID=gene-O5D79_000054;Name=O5D79_000054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000054 DALFDJ020000001.1 Protein Homology CDS 58105 59091 . + 0 ID=cds-HJH9161639.1;Parent=gene-O5D79_000054;Dbxref=NCBI_GP:HJH9161639.1;Name=HJH9161639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461486.1;locus_tag=O5D79_000054;product=nickel/cobalt transporter;protein_id=HJH9161639.1;transl_table=11 DALFDJ020000001.1 tpg gene 59092 60105 . - . ID=gene-O5D79_000055;Name=asrC;gbkey=Gene;gene=asrC;gene_biotype=protein_coding;locus_tag=O5D79_000055 DALFDJ020000001.1 Protein Homology CDS 59092 60105 . - 0 ID=cds-HJH9161640.1;Parent=gene-O5D79_000055;Dbxref=NCBI_GP:HJH9161640.1;Name=HJH9161640.1;Ontology_term=GO:0006790,GO:0016002;gbkey=CDS;gene=asrC;go_function=sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461485.1;locus_tag=O5D79_000055;product=sulfite reductase subunit C;protein_id=HJH9161640.1;transl_table=11 DALFDJ020000001.1 tpg gene 60116 60934 . - . ID=gene-O5D79_000056;Name=asrB;gbkey=Gene;gene=asrB;gene_biotype=protein_coding;locus_tag=O5D79_000056 DALFDJ020000001.1 Protein Homology CDS 60116 60934 . - 0 ID=cds-HJH9161641.1;Parent=gene-O5D79_000056;Dbxref=NCBI_GP:HJH9161641.1;Name=HJH9161641.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrB;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461484.1;locus_tag=O5D79_000056;product=anaerobic sulfite reductase subunit AsrB;protein_id=HJH9161641.1;transl_table=11 DALFDJ020000001.1 tpg gene 60938 61981 . - . ID=gene-O5D79_000057;Name=asrA;gbkey=Gene;gene=asrA;gene_biotype=protein_coding;locus_tag=O5D79_000057 DALFDJ020000001.1 Protein Homology CDS 60938 61981 . - 0 ID=cds-HJH9161642.1;Parent=gene-O5D79_000057;Dbxref=NCBI_GP:HJH9161642.1;Name=HJH9161642.1;Ontology_term=GO:0006790,GO:0009055,GO:0016002;gbkey=CDS;gene=asrA;go_function=electron transfer activity|0009055||IEA,sulfite reductase activity|0016002||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461483.1;locus_tag=O5D79_000057;product=anaerobic sulfite reductase subunit AsrA;protein_id=HJH9161642.1;transl_table=11 DALFDJ020000001.1 tpg gene 62163 63041 . - . ID=gene-O5D79_000058;Name=O5D79_000058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000058 DALFDJ020000001.1 Protein Homology CDS 62163 63041 . - 0 ID=cds-HJH9161643.1;Parent=gene-O5D79_000058;Dbxref=NCBI_GP:HJH9161643.1;Name=HJH9161643.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461482.1;locus_tag=O5D79_000058;product=alpha/beta hydrolase;protein_id=HJH9161643.1;transl_table=11 DALFDJ020000001.1 tpg gene 63186 63989 . - . ID=gene-O5D79_000059;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=O5D79_000059 DALFDJ020000001.1 Protein Homology CDS 63186 63989 . - 0 ID=cds-HJH9161644.1;Parent=gene-O5D79_000059;Dbxref=NCBI_GP:HJH9161644.1;Name=HJH9161644.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=O5D79_000059;product=inositol-1-monophosphatase;protein_id=HJH9161644.1;transl_table=11 DALFDJ020000001.1 tpg gene 64108 64839 . + . ID=gene-O5D79_000060;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=O5D79_000060 DALFDJ020000001.1 Protein Homology CDS 64108 64839 . + 0 ID=cds-HJH9161645.1;Parent=gene-O5D79_000060;Dbxref=NCBI_GP:HJH9161645.1;Name=HJH9161645.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461480.1;locus_tag=O5D79_000060;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=HJH9161645.1;transl_table=11 DALFDJ020000001.1 tpg gene 64999 65493 . + . ID=gene-O5D79_000061;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=O5D79_000061 DALFDJ020000001.1 Protein Homology CDS 64999 65493 . + 0 ID=cds-HJH9161646.1;Parent=gene-O5D79_000061;Dbxref=NCBI_GP:HJH9161646.1;Name=HJH9161646.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241352.1;locus_tag=O5D79_000061;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=HJH9161646.1;transl_table=11 DALFDJ020000001.1 tpg gene 65674 66888 . + . ID=gene-O5D79_000062;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=O5D79_000062 DALFDJ020000001.1 Protein Homology CDS 65674 66888 . + 0 ID=cds-HJH9161647.1;Parent=gene-O5D79_000062;Dbxref=NCBI_GP:HJH9161647.1;Name=HJH9161647.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=O5D79_000062;product=cysteine desulfurase;protein_id=HJH9161647.1;transl_table=11 DALFDJ020000001.1 tpg gene 66916 67302 . + . ID=gene-O5D79_000063;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=O5D79_000063 DALFDJ020000001.1 Protein Homology CDS 66916 67302 . + 0 ID=cds-HJH9161648.1;Parent=gene-O5D79_000063;Dbxref=NCBI_GP:HJH9161648.1;Name=HJH9161648.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=O5D79_000063;product=Fe-S cluster assembly scaffold IscU;protein_id=HJH9161648.1;transl_table=11 DALFDJ020000001.1 tpg gene 67331 67654 . + . ID=gene-O5D79_000064;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=O5D79_000064 DALFDJ020000001.1 Protein Homology CDS 67331 67654 . + 0 ID=cds-HJH9161649.1;Parent=gene-O5D79_000064;Dbxref=NCBI_GP:HJH9161649.1;Name=HJH9161649.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461476.1;locus_tag=O5D79_000064;product=iron-sulfur cluster assembly protein IscA;protein_id=HJH9161649.1;transl_table=11 DALFDJ020000001.1 tpg gene 67850 68365 . + . ID=gene-O5D79_000065;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=O5D79_000065 DALFDJ020000001.1 Protein Homology CDS 67850 68365 . + 0 ID=cds-HJH9161650.1;Parent=gene-O5D79_000065;Dbxref=NCBI_GP:HJH9161650.1;Name=HJH9161650.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461475.1;locus_tag=O5D79_000065;product=co-chaperone HscB;protein_id=HJH9161650.1;transl_table=11 DALFDJ020000001.1 tpg gene 68378 70228 . + . ID=gene-O5D79_000066;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=O5D79_000066 DALFDJ020000001.1 Protein Homology CDS 68378 70228 . + 0 ID=cds-HJH9161651.1;Parent=gene-O5D79_000066;Dbxref=NCBI_GP:HJH9161651.1;Name=HJH9161651.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=O5D79_000066;product=Fe-S protein assembly chaperone HscA;protein_id=HJH9161651.1;transl_table=11 DALFDJ020000001.1 tpg gene 70230 70565 . + . ID=gene-O5D79_000067;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=O5D79_000067 DALFDJ020000001.1 Protein Homology CDS 70230 70565 . + 0 ID=cds-HJH9161652.1;Parent=gene-O5D79_000067;Dbxref=NCBI_GP:HJH9161652.1;Name=HJH9161652.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=O5D79_000067;product=ISC system 2Fe-2S type ferredoxin;protein_id=HJH9161652.1;transl_table=11 DALFDJ020000001.1 tpg gene 70577 70777 . + . ID=gene-O5D79_000068;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=O5D79_000068 DALFDJ020000001.1 Protein Homology CDS 70577 70777 . + 0 ID=cds-HJH9161653.1;Parent=gene-O5D79_000068;Dbxref=NCBI_GP:HJH9161653.1;Name=HJH9161653.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=O5D79_000068;product=Fe-S cluster assembly protein IscX;protein_id=HJH9161653.1;transl_table=11 DALFDJ020000001.1 tpg gene 70831 72114 . + . ID=gene-O5D79_000069;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=O5D79_000069 DALFDJ020000001.1 Protein Homology CDS 70831 72114 . + 0 ID=cds-HJH9161654.1;Parent=gene-O5D79_000069;Dbxref=NCBI_GP:HJH9161654.1;Name=HJH9161654.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461471.1;locus_tag=O5D79_000069;product=aminopeptidase PepB;protein_id=HJH9161654.1;transl_table=11 DALFDJ020000001.1 tpg gene 72224 73000 . + . ID=gene-O5D79_000070;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=O5D79_000070 DALFDJ020000001.1 Protein Homology CDS 72224 73000 . + 0 ID=cds-HJH9161655.1;Parent=gene-O5D79_000070;Dbxref=NCBI_GP:HJH9161655.1;Name=HJH9161655.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=O5D79_000070;product=enhanced serine sensitivity protein SseB;protein_id=HJH9161655.1;transl_table=11 DALFDJ020000001.1 tpg gene 73037 73153 . - . ID=gene-O5D79_000071;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=O5D79_000071 DALFDJ020000001.1 Protein Homology CDS 73037 73153 . - 0 ID=cds-HJH9161656.1;Parent=gene-O5D79_000071;Dbxref=NCBI_GP:HJH9161656.1;Name=HJH9161656.1;gbkey=CDS;gene=timP;inference=COORDINATES: protein motif:HMM:NF040796.1;locus_tag=O5D79_000071;product=small toxic inner membrane protein TimP;protein_id=HJH9161656.1;transl_table=11 DALFDJ020000001.1 tpg gene 73569 74237 . - . ID=gene-O5D79_000072;Name=O5D79_000072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000072 DALFDJ020000001.1 Protein Homology CDS 73569 74237 . - 0 ID=cds-HJH9161657.1;Parent=gene-O5D79_000072;Dbxref=NCBI_GP:HJH9161657.1;Name=HJH9161657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461469.1;locus_tag=O5D79_000072;product=DUF5066 family protein;protein_id=HJH9161657.1;transl_table=11 DALFDJ020000001.1 tpg gene 74280 74504 . + . ID=gene-O5D79_000073;Name=O5D79_000073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000073 DALFDJ020000001.1 Protein Homology CDS 74280 74504 . + 0 ID=cds-HJH9161658.1;Parent=gene-O5D79_000073;Dbxref=NCBI_GP:HJH9161658.1;Name=HJH9161658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344128.1;locus_tag=O5D79_000073;product=hypothetical protein;protein_id=HJH9161658.1;transl_table=11 DALFDJ020000001.1 tpg gene 74484 75326 . - . ID=gene-O5D79_000074;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=O5D79_000074 DALFDJ020000001.1 Protein Homology CDS 74484 75326 . - 0 ID=cds-HJH9161659.1;Parent=gene-O5D79_000074;Dbxref=NCBI_GP:HJH9161659.1;Name=HJH9161659.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461468.1;locus_tag=O5D79_000074;product=3-mercaptopyruvate sulfurtransferase;protein_id=HJH9161659.1;transl_table=11 DALFDJ020000001.1 tpg gene 75535 80469 . + . ID=gene-O5D79_000075;Name=O5D79_000075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000075 DALFDJ020000001.1 Protein Homology CDS 75535 80469 . + 0 ID=cds-HJH9161660.1;Parent=gene-O5D79_000075;Dbxref=NCBI_GP:HJH9161660.1;Name=HJH9161660.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461467.1;locus_tag=O5D79_000075;product=alpha-2-macroglobulin family protein;protein_id=HJH9161660.1;transl_table=11 DALFDJ020000001.1 tpg gene 80470 82785 . + . ID=gene-O5D79_000076;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=O5D79_000076 DALFDJ020000001.1 Protein Homology CDS 80470 82785 . + 0 ID=cds-HJH9161661.1;Parent=gene-O5D79_000076;Dbxref=NCBI_GP:HJH9161661.1;Name=HJH9161661.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461466.1;locus_tag=O5D79_000076;product=peptidoglycan glycosyltransferase PbpC;protein_id=HJH9161661.1;transl_table=11 DALFDJ020000001.1 tpg gene 82941 85319 . + . ID=gene-O5D79_000077;Name=O5D79_000077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000077 DALFDJ020000001.1 Protein Homology CDS 82941 85319 . + 0 ID=cds-HJH9161662.1;Parent=gene-O5D79_000077;Dbxref=NCBI_GP:HJH9161662.1;Name=HJH9161662.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664463.1;locus_tag=O5D79_000077;product=DMSO/selenate family reductase complex A subunit;protein_id=HJH9161662.1;transl_table=11 DALFDJ020000001.1 tpg gene 85316 85945 . + . ID=gene-O5D79_000078;Name=O5D79_000078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000078 DALFDJ020000001.1 Protein Homology CDS 85316 85945 . + 0 ID=cds-HJH9161663.1;Parent=gene-O5D79_000078;Dbxref=NCBI_GP:HJH9161663.1;Name=HJH9161663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461464.1;locus_tag=O5D79_000078;product=DMSO/selenate family reductase complex B subunit;protein_id=HJH9161663.1;transl_table=11 DALFDJ020000001.1 tpg gene 85938 86747 . + . ID=gene-O5D79_000079;Name=O5D79_000079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000079 DALFDJ020000001.1 Protein Homology CDS 85938 86747 . + 0 ID=cds-HJH9161664.1;Parent=gene-O5D79_000079;Dbxref=NCBI_GP:HJH9161664.1;Name=HJH9161664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461463.2;locus_tag=O5D79_000079;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=HJH9161664.1;transl_table=11 DALFDJ020000001.1 tpg gene 86747 87610 . + . ID=gene-O5D79_000080;Name=O5D79_000080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000080 DALFDJ020000001.1 Protein Homology CDS 86747 87610 . + 0 ID=cds-HJH9161665.1;Parent=gene-O5D79_000080;Dbxref=NCBI_GP:HJH9161665.1;Name=HJH9161665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461462.1;locus_tag=O5D79_000080;product=4Fe-4S binding protein;protein_id=HJH9161665.1;transl_table=11 DALFDJ020000001.1 tpg gene 87731 88162 . + . ID=gene-O5D79_000081;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=O5D79_000081 DALFDJ020000001.1 Protein Homology CDS 87731 88162 . + 0 ID=cds-HJH9161666.1;Parent=gene-O5D79_000081;Dbxref=NCBI_GP:HJH9161666.1;Name=HJH9161666.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=O5D79_000081;product=nucleoside-diphosphate kinase;protein_id=HJH9161666.1;transl_table=11 DALFDJ020000001.1 tpg gene 88369 89535 . + . ID=gene-O5D79_000082;Name=O5D79_000082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000082 DALFDJ020000001.1 Protein Homology CDS 88369 89535 . + 0 ID=cds-HJH9161667.1;Parent=gene-O5D79_000082;Dbxref=NCBI_GP:HJH9161667.1;Name=HJH9161667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461460.1;locus_tag=O5D79_000082;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=HJH9161667.1;transl_table=11 DALFDJ020000001.1 tpg gene 89827 90843 . + . ID=gene-O5D79_000083;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=O5D79_000083 DALFDJ020000001.1 Protein Homology CDS 89827 90843 . + 0 ID=cds-HJH9161668.1;Parent=gene-O5D79_000083;Dbxref=NCBI_GP:HJH9161668.1;Name=HJH9161668.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461459.1;locus_tag=O5D79_000083;product=cytoskeleton protein RodZ;protein_id=HJH9161668.1;transl_table=11 DALFDJ020000001.1 tpg gene 90870 91988 . + . ID=gene-O5D79_000084;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=O5D79_000084 DALFDJ020000001.1 Protein Homology CDS 90870 91988 . + 0 ID=cds-HJH9161669.1;Parent=gene-O5D79_000084;Dbxref=NCBI_GP:HJH9161669.1;Name=HJH9161669.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461458.1;locus_tag=O5D79_000084;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=HJH9161669.1;transl_table=11 DALFDJ020000001.1 tpg gene 92099 93373 . + . ID=gene-O5D79_000085;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=O5D79_000085 DALFDJ020000001.1 Protein Homology CDS 92099 93373 . + 0 ID=cds-HJH9161670.1;Parent=gene-O5D79_000085;Dbxref=NCBI_GP:HJH9161670.1;Name=HJH9161670.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461457.1;locus_tag=O5D79_000085;product=histidine--tRNA ligase;protein_id=HJH9161670.1;transl_table=11 DALFDJ020000001.1 tpg gene 93387 94007 . + . ID=gene-O5D79_000086;Name=O5D79_000086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000086 DALFDJ020000001.1 Protein Homology CDS 93387 94007 . + 0 ID=cds-HJH9161671.1;Parent=gene-O5D79_000086;Dbxref=NCBI_GP:HJH9161671.1;Name=HJH9161671.1;Ontology_term=GO:0005515,GO:0044877;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-containing complex binding|0044877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461456.1;locus_tag=O5D79_000086;product=YfgM family protein;protein_id=HJH9161671.1;transl_table=11 DALFDJ020000001.1 tpg gene 94018 95196 . + . ID=gene-O5D79_000087;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=O5D79_000087 DALFDJ020000001.1 Protein Homology CDS 94018 95196 . + 0 ID=cds-HJH9161672.1;Parent=gene-O5D79_000087;Dbxref=NCBI_GP:HJH9161672.1;Name=HJH9161672.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461455.1;locus_tag=O5D79_000087;product=outer membrane protein assembly factor BamB;protein_id=HJH9161672.1;transl_table=11 DALFDJ020000001.1 tpg gene 95313 96785 . + . ID=gene-O5D79_000088;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=O5D79_000088 DALFDJ020000001.1 Protein Homology CDS 95313 96785 . + 0 ID=cds-HJH9161673.1;Parent=gene-O5D79_000088;Dbxref=NCBI_GP:HJH9161673.1;Name=HJH9161673.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=O5D79_000088;product=ribosome biogenesis GTPase Der;protein_id=HJH9161673.1;transl_table=11 DALFDJ020000001.1 tpg gene 96874 97095 . + . ID=gene-O5D79_000089;Name=O5D79_000089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000089 DALFDJ020000001.1 Protein Homology CDS 96874 97095 . + 0 ID=cds-HJH9161674.1;Parent=gene-O5D79_000089;Dbxref=NCBI_GP:HJH9161674.1;Name=HJH9161674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461453.1;locus_tag=O5D79_000089;product=zinc ribbon domain-containing protein;protein_id=HJH9161674.1;transl_table=11 DALFDJ020000001.1 tpg gene 97441 99633 . + . ID=gene-O5D79_000090;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=protein_coding;locus_tag=O5D79_000090 DALFDJ020000001.1 Protein Homology CDS 97441 99633 . + 0 ID=cds-HJH9161675.1;Parent=gene-O5D79_000090;Dbxref=NCBI_GP:HJH9161675.1;Name=HJH9161675.1;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461452.1;locus_tag=O5D79_000090;product=intimin-like inverse autotransporter SinH;protein_id=HJH9161675.1;transl_table=11 DALFDJ020000001.1 tpg gene 99691 100662 . + . ID=gene-O5D79_000091;Name=O5D79_000091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000091 DALFDJ020000001.1 Protein Homology CDS 99691 100662 . + 0 ID=cds-HJH9161676.1;Parent=gene-O5D79_000091;Dbxref=NCBI_GP:HJH9161676.1;Name=HJH9161676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461451.1;locus_tag=O5D79_000091;product=SinI family autotransporter-associated protein;protein_id=HJH9161676.1;transl_table=11 DALFDJ020000001.1 tpg gene 100782 106373 . + . ID=gene-O5D79_000092;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=O5D79_000092 DALFDJ020000001.1 Protein Homology CDS 100782 106373 . + 0 ID=cds-HJH9161677.1;Parent=gene-O5D79_000092;Dbxref=NCBI_GP:HJH9161677.1;Name=HJH9161677.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461450.1;locus_tag=O5D79_000092;product=DUF823/DUF824 repeat adhesin RatA;protein_id=HJH9161677.1;transl_table=11 DALFDJ020000001.1 tpg gene 106539 113849 . + . ID=gene-O5D79_000093;Name=ratB;gbkey=Gene;gene=ratB;gene_biotype=protein_coding;locus_tag=O5D79_000093 DALFDJ020000001.1 Protein Homology CDS 106539 113849 . + 0 ID=cds-HJH9161678.1;Parent=gene-O5D79_000093;Dbxref=NCBI_GP:HJH9161678.1;Name=HJH9161678.1;gbkey=CDS;gene=ratB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461449.1;locus_tag=O5D79_000093;product=DUF823/DUF824 repeat adhesin RatB;protein_id=HJH9161678.1;transl_table=11 DALFDJ020000001.1 tpg pseudogene 113850 113950 . + . ID=gene-O5D79_000094;Name=O5D79_000094;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_000094;pseudo=true DALFDJ020000001.1 Protein Homology CDS 113850 113950 . + 0 ID=cds-O5D79_000094;Parent=gene-O5D79_000094;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_309258417.1;locus_tag=O5D79_000094;product=IS1 family transposase;pseudo=true;transl_table=11 DALFDJ020000001.1 tpg gene 114508 120651 . + . ID=gene-O5D79_000095;Name=shdA;gbkey=Gene;gene=shdA;gene_biotype=protein_coding;locus_tag=O5D79_000095 DALFDJ020000001.1 Protein Homology CDS 114508 120651 . + 0 ID=cds-HJH9161679.1;Parent=gene-O5D79_000095;Dbxref=NCBI_GP:HJH9161679.1;Name=HJH9161679.1;Ontology_term=GO:0019867;gbkey=CDS;gene=shdA;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835909.1;locus_tag=O5D79_000095;product=fibronectin-binding autotransporter adhesin ShdA;protein_id=HJH9161679.1;transl_table=11 DALFDJ020000001.1 tpg gene 120813 122162 . - . ID=gene-O5D79_000096;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=O5D79_000096 DALFDJ020000001.1 Protein Homology CDS 120813 122162 . - 0 ID=cds-HJH9161680.1;Parent=gene-O5D79_000096;Dbxref=NCBI_GP:HJH9161680.1;Name=HJH9161680.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461447.1;locus_tag=O5D79_000096;product=exodeoxyribonuclease VII large subunit;protein_id=HJH9161680.1;transl_table=11 DALFDJ020000001.1 tpg gene 122323 123789 . + . ID=gene-O5D79_000097;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=O5D79_000097 DALFDJ020000001.1 Protein Homology CDS 122323 123789 . + 0 ID=cds-HJH9161681.1;Parent=gene-O5D79_000097;Dbxref=NCBI_GP:HJH9161681.1;Name=HJH9161681.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=O5D79_000097;product=IMP dehydrogenase;protein_id=HJH9161681.1;transl_table=11 DALFDJ020000001.1 tpg gene 123859 125436 . + . ID=gene-O5D79_000098;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=O5D79_000098 DALFDJ020000001.1 Protein Homology CDS 123859 125436 . + 0 ID=cds-HJH9161682.1;Parent=gene-O5D79_000098;Dbxref=NCBI_GP:HJH9161682.1;Name=HJH9161682.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=O5D79_000098;product=glutamine-hydrolyzing GMP synthase;protein_id=HJH9161682.1;transl_table=11 DALFDJ020000001.1 tpg pseudogene 125572 125891 . + . ID=gene-O5D79_000099;Name=O5D79_000099;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_000099;pseudo=true DALFDJ020000001.1 Protein Homology CDS 125572 125891 . + 0 ID=cds-O5D79_000099;Parent=gene-O5D79_000099;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611342.1;locus_tag=O5D79_000099;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 DALFDJ020000001.1 tpg gene 125968 126297 . - . ID=gene-O5D79_000100;Name=O5D79_000100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000100 DALFDJ020000001.1 Protein Homology CDS 125968 126297 . - 0 ID=cds-HJH9161683.1;Parent=gene-O5D79_000100;Dbxref=NCBI_GP:HJH9161683.1;Name=HJH9161683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461443.1;locus_tag=O5D79_000100;product=DUF1493 family protein;protein_id=HJH9161683.1;transl_table=11 DALFDJ020000001.1 tpg gene 126282 126743 . - . ID=gene-O5D79_000101;Name=O5D79_000101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000101 DALFDJ020000001.1 Protein Homology CDS 126282 126743 . - 0 ID=cds-HJH9161684.1;Parent=gene-O5D79_000101;Dbxref=NCBI_GP:HJH9161684.1;Name=HJH9161684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_154057295.1;locus_tag=O5D79_000101;product=STM2901 family protein;protein_id=HJH9161684.1;transl_table=11 DALFDJ020000001.1 tpg pseudogene 126883 127002 . + . ID=gene-O5D79_000102;Name=O5D79_000102;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_000102;pseudo=true DALFDJ020000001.1 Protein Homology CDS 126883 127002 . + 0 ID=cds-O5D79_000102;Parent=gene-O5D79_000102;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448901.1;locus_tag=O5D79_000102;product=hypothetical protein;pseudo=true;transl_table=11 DALFDJ020000001.1 tpg gene 127080 127271 . - . ID=gene-O5D79_000103;Name=O5D79_000103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000103 DALFDJ020000001.1 Protein Homology CDS 127080 127271 . - 0 ID=cds-HJH9161685.1;Parent=gene-O5D79_000103;Dbxref=NCBI_GP:HJH9161685.1;Name=HJH9161685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461441.1;locus_tag=O5D79_000103;product=YfgG family protein;protein_id=HJH9161685.1;transl_table=11 DALFDJ020000001.1 tpg gene 127450 127587 . + . ID=gene-O5D79_000104;Name=O5D79_000104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000104 DALFDJ020000001.1 Protein Homology CDS 127450 127587 . + 0 ID=cds-HJH9161686.1;Parent=gene-O5D79_000104;Dbxref=NCBI_GP:HJH9161686.1;Name=HJH9161686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448898.1;locus_tag=O5D79_000104;product=hypothetical protein;protein_id=HJH9161686.1;transl_table=11 DALFDJ020000001.1 tpg gene 127684 129897 . + . ID=gene-O5D79_000105;Name=O5D79_000105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000105 DALFDJ020000001.1 Protein Homology CDS 127684 129897 . + 0 ID=cds-HJH9161687.1;Parent=gene-O5D79_000105;Dbxref=NCBI_GP:HJH9161687.1;Name=HJH9161687.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461438.1;locus_tag=O5D79_000105;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=HJH9161687.1;transl_table=11 DALFDJ020000001.1 tpg gene 129933 131474 . - . ID=gene-O5D79_000106;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=O5D79_000106 DALFDJ020000001.1 Protein Homology CDS 129933 131474 . - 0 ID=cds-HJH9161688.1;Parent=gene-O5D79_000106;Dbxref=NCBI_GP:HJH9161688.1;Name=HJH9161688.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461437.1;locus_tag=O5D79_000106;product=exopolyphosphatase;protein_id=HJH9161688.1;transl_table=11 DALFDJ020000001.1 tpg gene 131479 133545 . - . ID=gene-O5D79_000107;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=O5D79_000107 DALFDJ020000001.1 Protein Homology CDS 131479 133545 . - 0 ID=cds-HJH9161689.1;Parent=gene-O5D79_000107;Dbxref=NCBI_GP:HJH9161689.1;Name=HJH9161689.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=O5D79_000107;product=polyphosphate kinase 1;protein_id=HJH9161689.1;transl_table=11 DALFDJ020000001.1 tpg gene 133734 134372 . - . ID=gene-O5D79_000108;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=O5D79_000108 DALFDJ020000001.1 Protein Homology CDS 133734 134372 . - 0 ID=cds-HJH9161690.1;Parent=gene-O5D79_000108;Dbxref=NCBI_GP:HJH9161690.1;Name=HJH9161690.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461435.1;locus_tag=O5D79_000108;product=phosphoribosylglycinamide formyltransferase;protein_id=HJH9161690.1;transl_table=11 DALFDJ020000001.1 tpg gene 134372 135409 . - . ID=gene-O5D79_000109;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=O5D79_000109 DALFDJ020000001.1 Protein Homology CDS 134372 135409 . - 0 ID=cds-HJH9161691.1;Parent=gene-O5D79_000109;Dbxref=NCBI_GP:HJH9161691.1;Name=HJH9161691.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001656828.1;locus_tag=O5D79_000109;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=HJH9161691.1;transl_table=11 DALFDJ020000001.1 tpg gene 135823 136449 . + . ID=gene-O5D79_000110;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=O5D79_000110 DALFDJ020000001.1 Protein Homology CDS 135823 136449 . + 0 ID=cds-HJH9161692.1;Parent=gene-O5D79_000110;Dbxref=NCBI_GP:HJH9161692.1;Name=HJH9161692.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=O5D79_000110;product=uracil phosphoribosyltransferase;protein_id=HJH9161692.1;transl_table=11 DALFDJ020000001.1 tpg gene 136537 137826 . + . ID=gene-O5D79_000111;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=O5D79_000111 DALFDJ020000001.1 Protein Homology CDS 136537 137826 . + 0 ID=cds-HJH9161693.1;Parent=gene-O5D79_000111;Dbxref=NCBI_GP:HJH9161693.1;Name=HJH9161693.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461432.1;locus_tag=O5D79_000111;product=uracil permease;protein_id=HJH9161693.1;transl_table=11 DALFDJ020000001.1 tpg gene 137921 138622 . + . ID=gene-O5D79_000112;Name=O5D79_000112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000112 DALFDJ020000001.1 Protein Homology CDS 137921 138622 . + 0 ID=cds-HJH9161694.1;Parent=gene-O5D79_000112;Dbxref=NCBI_GP:HJH9161694.1;Name=HJH9161694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=O5D79_000112;product=DnaA inactivator Hda;protein_id=HJH9161694.1;transl_table=11 DALFDJ020000001.1 tpg gene 138649 139008 . - . ID=gene-O5D79_000113;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=O5D79_000113 DALFDJ020000001.1 Protein Homology CDS 138649 139008 . - 0 ID=cds-HJH9161695.1;Parent=gene-O5D79_000113;Dbxref=NCBI_GP:HJH9161695.1;Name=HJH9161695.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461430.1;locus_tag=O5D79_000113;product=arsenate reductase (glutaredoxin);protein_id=HJH9161695.1;transl_table=11 DALFDJ020000001.1 tpg gene 139048 140511 . - . ID=gene-O5D79_000114;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=O5D79_000114 DALFDJ020000001.1 Protein Homology CDS 139048 140511 . - 0 ID=cds-HJH9161696.1;Parent=gene-O5D79_000114;Dbxref=NCBI_GP:HJH9161696.1;Name=HJH9161696.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461429.1;locus_tag=O5D79_000114;product=beta-barrel assembly-enhancing protease;protein_id=HJH9161696.1;transl_table=11 DALFDJ020000001.1 tpg gene 140719 141786 . + . ID=gene-O5D79_000115;Name=O5D79_000115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000115 DALFDJ020000001.1 Protein Homology CDS 140719 141786 . + 0 ID=cds-HJH9161697.1;Parent=gene-O5D79_000115;Dbxref=NCBI_GP:HJH9161697.1;Name=HJH9161697.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461428.1;locus_tag=O5D79_000115;product=AI-2E family transporter;protein_id=HJH9161697.1;transl_table=11 DALFDJ020000001.1 tpg gene 142062 143249 . + . ID=gene-O5D79_000116;Name=O5D79_000116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000116 DALFDJ020000001.1 Protein Homology CDS 142062 143249 . + 0 ID=cds-HJH9161698.1;Parent=gene-O5D79_000116;Dbxref=NCBI_GP:HJH9161698.1;Name=HJH9161698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667973.1;locus_tag=O5D79_000116;product=sugar diacid recognition domain-containing protein;protein_id=HJH9161698.1;transl_table=11 DALFDJ020000001.1 tpg gene 143317 144585 . + . ID=gene-O5D79_000117;Name=O5D79_000117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000117 DALFDJ020000001.1 Protein Homology CDS 143317 144585 . + 0 ID=cds-HJH9161699.1;Parent=gene-O5D79_000117;Dbxref=NCBI_GP:HJH9161699.1;Name=HJH9161699.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090684.1;locus_tag=O5D79_000117;product=GntP family permease;protein_id=HJH9161699.1;transl_table=11 DALFDJ020000001.1 tpg gene 144591 145730 . + . ID=gene-O5D79_000118;Name=O5D79_000118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000118 DALFDJ020000001.1 Protein Homology CDS 144591 145730 . + 0 ID=cds-HJH9161700.1;Parent=gene-O5D79_000118;Dbxref=NCBI_GP:HJH9161700.1;Name=HJH9161700.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000706371.1;locus_tag=O5D79_000118;product=glycerate kinase;protein_id=HJH9161700.1;transl_table=11 DALFDJ020000001.1 tpg gene 145777 146247 . - . ID=gene-O5D79_000119;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=O5D79_000119 DALFDJ020000001.1 Protein Homology CDS 145777 146247 . - 0 ID=cds-HJH9161701.1;Parent=gene-O5D79_000119;Dbxref=NCBI_GP:HJH9161701.1;Name=HJH9161701.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461426.1;locus_tag=O5D79_000119;product=thioredoxin-dependent thiol peroxidase;protein_id=HJH9161701.1;transl_table=11 DALFDJ020000001.1 tpg gene 146247 146819 . - . ID=gene-O5D79_000120;Name=O5D79_000120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000120 DALFDJ020000001.1 Protein Homology CDS 146247 146819 . - 0 ID=cds-HJH9161702.1;Parent=gene-O5D79_000120;Dbxref=NCBI_GP:HJH9161702.1;Name=HJH9161702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=O5D79_000120;product=glycine cleavage system transcriptional repressor;protein_id=HJH9161702.1;transl_table=11 DALFDJ020000001.1 tpg gene 146965 147843 . + . ID=gene-O5D79_000121;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=O5D79_000121 DALFDJ020000001.1 Protein Homology CDS 146965 147843 . + 0 ID=cds-HJH9161703.1;Parent=gene-O5D79_000121;Dbxref=NCBI_GP:HJH9161703.1;Name=HJH9161703.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=O5D79_000121;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=HJH9161703.1;transl_table=11 DALFDJ020000001.1 tpg gene 147860 148894 . + . ID=gene-O5D79_000122;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=O5D79_000122 DALFDJ020000001.1 Protein Homology CDS 147860 148894 . + 0 ID=cds-HJH9161704.1;Parent=gene-O5D79_000122;Dbxref=NCBI_GP:HJH9161704.1;Name=HJH9161704.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461423.1;locus_tag=O5D79_000122;product=outer membrane protein assembly factor BamC;protein_id=HJH9161704.1;transl_table=11 DALFDJ020000001.1 tpg gene 149069 149782 . + . ID=gene-O5D79_000123;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=O5D79_000123 DALFDJ020000001.1 Protein Homology CDS 149069 149782 . + 0 ID=cds-HJH9161705.1;Parent=gene-O5D79_000123;Dbxref=NCBI_GP:HJH9161705.1;Name=HJH9161705.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=O5D79_000123;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=HJH9161705.1;transl_table=11 DALFDJ020000001.1 tpg gene 149913 150776 . + . ID=gene-O5D79_000124;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=O5D79_000124 DALFDJ020000001.1 Protein Homology CDS 149913 150776 . + 0 ID=cds-HJH9161706.1;Parent=gene-O5D79_000124;Dbxref=NCBI_GP:HJH9161706.1;Name=HJH9161706.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461421.1;locus_tag=O5D79_000124;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=HJH9161706.1;transl_table=11 DALFDJ020000001.1 tpg gene 150792 152810 . + . ID=gene-O5D79_000125;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=O5D79_000125 DALFDJ020000001.1 Protein Homology CDS 150792 152810 . + 0 ID=cds-HJH9161707.1;Parent=gene-O5D79_000125;Dbxref=NCBI_GP:HJH9161707.1;Name=HJH9161707.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461420.1;locus_tag=O5D79_000125;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=HJH9161707.1;transl_table=11 DALFDJ020000001.1 tpg gene 152837 153037 . - . ID=gene-O5D79_000126;Name=O5D79_000126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000126 DALFDJ020000001.1 Protein Homology CDS 152837 153037 . - 0 ID=cds-HJH9161708.1;Parent=gene-O5D79_000126;Dbxref=NCBI_GP:HJH9161708.1;Name=HJH9161708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461419.1;locus_tag=O5D79_000126;product=YpfN family protein;protein_id=HJH9161708.1;transl_table=11 DALFDJ020000001.1 tpg gene 153065 154192 . - . ID=gene-O5D79_000127;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=O5D79_000127 DALFDJ020000001.1 Protein Homology CDS 153065 154192 . - 0 ID=cds-HJH9161709.1;Parent=gene-O5D79_000127;Dbxref=NCBI_GP:HJH9161709.1;Name=HJH9161709.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=O5D79_000127;product=succinyl-diaminopimelate desuccinylase;protein_id=HJH9161709.1;transl_table=11 DALFDJ020000001.1 tpg gene 154196 154552 . - . ID=gene-O5D79_000128;Name=O5D79_000128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000128 DALFDJ020000001.1 Protein Homology CDS 154196 154552 . - 0 ID=cds-HJH9161710.1;Parent=gene-O5D79_000128;Dbxref=NCBI_GP:HJH9161710.1;Name=HJH9161710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461417.1;locus_tag=O5D79_000128;product=ArsC family reductase;protein_id=HJH9161710.1;transl_table=11 DALFDJ020000001.1 tpg gene 154965 155024 . + . ID=gene-O5D79_000129;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=O5D79_000129 DALFDJ020000001.1 Protein Homology CDS 154965 155024 . + 0 ID=cds-HJH9161711.1;Parent=gene-O5D79_000129;Dbxref=NCBI_GP:HJH9161711.1;Name=HJH9161711.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=O5D79_000129;product=protein YpfM;protein_id=HJH9161711.1;transl_table=11 DALFDJ020000001.1 tpg gene 155126 158239 . - . ID=gene-O5D79_000130;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=O5D79_000130 DALFDJ020000001.1 Protein Homology CDS 155126 158239 . - 0 ID=cds-HJH9161712.1;Parent=gene-O5D79_000130;Dbxref=NCBI_GP:HJH9161712.1;Name=HJH9161712.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461416.1;locus_tag=O5D79_000130;product=multidrug efflux RND transporter permease AcrD;protein_id=HJH9161712.1;transl_table=11 DALFDJ020000001.1 tpg gene 158424 160124 . - . ID=gene-O5D79_000131;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=O5D79_000131 DALFDJ020000001.1 Protein Homology CDS 158424 160124 . - 0 ID=cds-HJH9161713.1;Parent=gene-O5D79_000131;Dbxref=NCBI_GP:HJH9161713.1;Name=HJH9161713.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461415.1;locus_tag=O5D79_000131;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=HJH9161713.1;transl_table=11 DALFDJ020000001.1 tpg gene 160310 162271 . + . ID=gene-O5D79_000132;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=O5D79_000132 DALFDJ020000001.1 Protein Homology CDS 160310 162271 . + 0 ID=cds-HJH9161714.1;Parent=gene-O5D79_000132;Dbxref=NCBI_GP:HJH9161714.1;Name=HJH9161714.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461414.1;locus_tag=O5D79_000132;product=formate-dependent uric acid utilization protein AegA;protein_id=HJH9161714.1;transl_table=11 DALFDJ020000001.1 tpg gene 162720 164018 . - . ID=gene-O5D79_000133;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=O5D79_000133 DALFDJ020000001.1 Protein Homology CDS 162720 164018 . - 0 ID=cds-HJH9161715.1;Parent=gene-O5D79_000133;Dbxref=NCBI_GP:HJH9161715.1;Name=HJH9161715.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461413.1;locus_tag=O5D79_000133;product=penicillin binding protein PBP4B;protein_id=HJH9161715.1;transl_table=11 DALFDJ020000001.1 tpg gene 164222 164797 . + . ID=gene-O5D79_000134;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=O5D79_000134 DALFDJ020000001.1 Protein Homology CDS 164222 164797 . + 0 ID=cds-HJH9161716.1;Parent=gene-O5D79_000134;Dbxref=NCBI_GP:HJH9161716.1;Name=HJH9161716.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461412.1;locus_tag=O5D79_000134;product=GDP-mannose pyrophosphatase NudK;protein_id=HJH9161716.1;transl_table=11 DALFDJ020000001.1 tpg gene 164922 165965 . + . ID=gene-O5D79_000135;Name=O5D79_000135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000135 DALFDJ020000001.1 Protein Homology CDS 164922 165965 . + 0 ID=cds-HJH9161717.1;Parent=gene-O5D79_000135;Dbxref=NCBI_GP:HJH9161717.1;Name=HJH9161717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461411.1;locus_tag=O5D79_000135;product=DUF1176 domain-containing protein;protein_id=HJH9161717.1;transl_table=11 DALFDJ020000001.1 tpg gene 166093 166323 . + . ID=gene-O5D79_000136;Name=O5D79_000136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000136 DALFDJ020000001.1 Protein Homology CDS 166093 166323 . + 0 ID=cds-HJH9161718.1;Parent=gene-O5D79_000136;Dbxref=NCBI_GP:HJH9161718.1;Name=HJH9161718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461410.1;locus_tag=O5D79_000136;product=hypothetical protein;protein_id=HJH9161718.1;transl_table=11 DALFDJ020000001.1 tpg gene 166386 168386 . - . ID=gene-O5D79_000137;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=O5D79_000137 DALFDJ020000001.1 Protein Homology CDS 166386 168386 . - 0 ID=cds-HJH9161719.1;Parent=gene-O5D79_000137;Dbxref=NCBI_GP:HJH9161719.1;Name=HJH9161719.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461409.1;locus_tag=O5D79_000137;product=transketolase;protein_id=HJH9161719.1;transl_table=11 DALFDJ020000001.1 tpg gene 168406 169356 . - . ID=gene-O5D79_000138;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=O5D79_000138 DALFDJ020000001.1 Protein Homology CDS 168406 169356 . - 0 ID=cds-HJH9161720.1;Parent=gene-O5D79_000138;Dbxref=NCBI_GP:HJH9161720.1;Name=HJH9161720.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461408.1;locus_tag=O5D79_000138;product=transaldolase;protein_id=HJH9161720.1;transl_table=11 DALFDJ020000001.1 tpg gene 169628 171907 . + . ID=gene-O5D79_000139;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=O5D79_000139 DALFDJ020000001.1 Protein Homology CDS 169628 171907 . + 0 ID=cds-HJH9161721.1;Parent=gene-O5D79_000139;Dbxref=NCBI_GP:HJH9161721.1;Name=HJH9161721.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461407.1;locus_tag=O5D79_000139;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=HJH9161721.1;transl_table=11 DALFDJ020000001.1 tpg gene 172324 172659 . + . ID=gene-O5D79_000140;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=O5D79_000140 DALFDJ020000001.1 Protein Homology CDS 172324 172659 . + 0 ID=cds-HJH9161722.1;Parent=gene-O5D79_000140;Dbxref=NCBI_GP:HJH9161722.1;Name=HJH9161722.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461405.1;locus_tag=O5D79_000140;product=ethanolamine utilization microcompartment protein EutS;protein_id=HJH9161722.1;transl_table=11 DALFDJ020000001.1 tpg gene 172672 173151 . + . ID=gene-O5D79_000141;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=O5D79_000141 DALFDJ020000001.1 Protein Homology CDS 172672 173151 . + 0 ID=cds-HJH9161723.1;Parent=gene-O5D79_000141;Dbxref=NCBI_GP:HJH9161723.1;Name=HJH9161723.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461404.1;locus_tag=O5D79_000141;product=ethanolamine utilization acetate kinase EutP;protein_id=HJH9161723.1;transl_table=11 DALFDJ020000001.1 tpg gene 173129 173818 . + . ID=gene-O5D79_000142;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=O5D79_000142 DALFDJ020000001.1 Protein Homology CDS 173129 173818 . + 0 ID=cds-HJH9161724.1;Parent=gene-O5D79_000142;Dbxref=NCBI_GP:HJH9161724.1;Name=HJH9161724.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461403.1;locus_tag=O5D79_000142;product=ethanolamine utilization acetate kinase EutQ;protein_id=HJH9161724.1;transl_table=11 DALFDJ020000001.1 tpg gene 173815 174618 . + . ID=gene-O5D79_000143;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=O5D79_000143 DALFDJ020000001.1 Protein Homology CDS 173815 174618 . + 0 ID=cds-HJH9161725.1;Parent=gene-O5D79_000143;Dbxref=NCBI_GP:HJH9161725.1;Name=HJH9161725.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461402.1;locus_tag=O5D79_000143;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=HJH9161725.1;transl_table=11 DALFDJ020000001.1 tpg gene 174615 175631 . + . ID=gene-O5D79_000144;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=O5D79_000144 DALFDJ020000001.1 Protein Homology CDS 174615 175631 . + 0 ID=cds-HJH9161726.1;Parent=gene-O5D79_000144;Dbxref=NCBI_GP:HJH9161726.1;Name=HJH9161726.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461401.1;locus_tag=O5D79_000144;product=phosphate acetyltransferase;protein_id=HJH9161726.1;transl_table=11 DALFDJ020000001.1 tpg gene 175672 175962 . + . ID=gene-O5D79_000145;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=O5D79_000145 DALFDJ020000001.1 Protein Homology CDS 175672 175962 . + 0 ID=cds-HJH9161727.1;Parent=gene-O5D79_000145;Dbxref=NCBI_GP:HJH9161727.1;Name=HJH9161727.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461400.1;locus_tag=O5D79_000145;product=ethanolamine utilization microcompartment protein EutM;protein_id=HJH9161727.1;transl_table=11 DALFDJ020000001.1 tpg gene 176075 176362 . + . ID=gene-O5D79_000146;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=O5D79_000146 DALFDJ020000001.1 Protein Homology CDS 176075 176362 . + 0 ID=cds-HJH9161728.1;Parent=gene-O5D79_000146;Dbxref=NCBI_GP:HJH9161728.1;Name=HJH9161728.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=O5D79_000146;product=ethanolamine utilization microcompartment protein EutN;protein_id=HJH9161728.1;transl_table=11 DALFDJ020000001.1 tpg gene 176374 177777 . + . ID=gene-O5D79_000147;Name=O5D79_000147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000147 DALFDJ020000001.1 Protein Homology CDS 176374 177777 . + 0 ID=cds-HJH9161729.1;Parent=gene-O5D79_000147;Dbxref=NCBI_GP:HJH9161729.1;Name=HJH9161729.1;Ontology_term=GO:0004029,GO:0008774;gbkey=CDS;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA,acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461398.1;locus_tag=O5D79_000147;product=aldehyde dehydrogenase family protein;protein_id=HJH9161729.1;transl_table=11 DALFDJ020000001.1 tpg gene 177788 178627 . + . ID=gene-O5D79_000148;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=O5D79_000148 DALFDJ020000001.1 Protein Homology CDS 177788 178627 . + 0 ID=cds-HJH9161730.1;Parent=gene-O5D79_000148;Dbxref=NCBI_GP:HJH9161730.1;Name=HJH9161730.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461397.1;locus_tag=O5D79_000148;product=ethanolamine utilization protein EutJ;protein_id=HJH9161730.1;transl_table=11 DALFDJ020000001.1 tpg gene 178617 179804 . + . ID=gene-O5D79_000149;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=O5D79_000149 DALFDJ020000001.1 Protein Homology CDS 178617 179804 . + 0 ID=cds-HJH9161731.1;Parent=gene-O5D79_000149;Dbxref=NCBI_GP:HJH9161731.1;Name=HJH9161731.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461396.1;locus_tag=O5D79_000149;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=HJH9161731.1;transl_table=11 DALFDJ020000001.1 tpg gene 179924 181150 . + . ID=gene-O5D79_000150;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=O5D79_000150 DALFDJ020000001.1 Protein Homology CDS 179924 181150 . + 0 ID=cds-HJH9161732.1;Parent=gene-O5D79_000150;Dbxref=NCBI_GP:HJH9161732.1;Name=HJH9161732.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461395.1;locus_tag=O5D79_000150;product=ethanolamine utilization protein EutH;protein_id=HJH9161732.1;transl_table=11 DALFDJ020000001.1 tpg gene 181147 182550 . + . ID=gene-O5D79_000151;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=O5D79_000151 DALFDJ020000001.1 Protein Homology CDS 181147 182550 . + 0 ID=cds-HJH9161733.1;Parent=gene-O5D79_000151;Dbxref=NCBI_GP:HJH9161733.1;Name=HJH9161733.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461394.1;locus_tag=O5D79_000151;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=HJH9161733.1;transl_table=11 DALFDJ020000001.1 tpg gene 182562 183923 . + . ID=gene-O5D79_000152;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=O5D79_000152 DALFDJ020000001.1 Protein Homology CDS 182562 183923 . + 0 ID=cds-HJH9161734.1;Parent=gene-O5D79_000152;Dbxref=NCBI_GP:HJH9161734.1;Name=HJH9161734.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461393.1;locus_tag=O5D79_000152;product=ethanolamine ammonia-lyase subunit alpha;protein_id=HJH9161734.1;transl_table=11 DALFDJ020000001.1 tpg gene 183942 184838 . + . ID=gene-O5D79_000153;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=O5D79_000153 DALFDJ020000001.1 Protein Homology CDS 183942 184838 . + 0 ID=cds-HJH9161735.1;Parent=gene-O5D79_000153;Dbxref=NCBI_GP:HJH9161735.1;Name=HJH9161735.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461392.1;locus_tag=O5D79_000153;product=ethanolamine ammonia-lyase subunit EutC;protein_id=HJH9161735.1;transl_table=11 DALFDJ020000001.1 tpg gene 184848 185507 . + . ID=gene-O5D79_000154;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=O5D79_000154 DALFDJ020000001.1 Protein Homology CDS 184848 185507 . + 0 ID=cds-HJH9161736.1;Parent=gene-O5D79_000154;Dbxref=NCBI_GP:HJH9161736.1;Name=HJH9161736.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=O5D79_000154;product=ethanolamine utilization microcompartment protein EutL;protein_id=HJH9161736.1;transl_table=11 DALFDJ020000001.1 tpg gene 185520 186014 . + . ID=gene-O5D79_000155;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=O5D79_000155 DALFDJ020000001.1 Protein Homology CDS 185520 186014 . + 0 ID=cds-HJH9161737.1;Parent=gene-O5D79_000155;Dbxref=NCBI_GP:HJH9161737.1;Name=HJH9161737.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461390.1;locus_tag=O5D79_000155;product=ethanolamine utilization microcompartment protein EutK;protein_id=HJH9161737.1;transl_table=11 DALFDJ020000001.1 tpg gene 186062 187114 . + . ID=gene-O5D79_000156;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=O5D79_000156 DALFDJ020000001.1 Protein Homology CDS 186062 187114 . + 0 ID=cds-HJH9161738.1;Parent=gene-O5D79_000156;Dbxref=NCBI_GP:HJH9161738.1;Name=HJH9161738.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461389.1;locus_tag=O5D79_000156;product=HTH-type transcriptional regulator EutR;protein_id=HJH9161738.1;transl_table=11 DALFDJ020000001.1 tpg gene 187314 188591 . - . ID=gene-O5D79_000157;Name=O5D79_000157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000157 DALFDJ020000001.1 Protein Homology CDS 187314 188591 . - 0 ID=cds-HJH9161739.1;Parent=gene-O5D79_000157;Dbxref=NCBI_GP:HJH9161739.1;Name=HJH9161739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461388.1;locus_tag=O5D79_000157;product=DUF1963 domain-containing protein;protein_id=HJH9161739.1;transl_table=11 DALFDJ020000001.1 tpg gene 188720 189049 . - . ID=gene-O5D79_000158;Name=O5D79_000158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000158 DALFDJ020000001.1 Protein Homology CDS 188720 189049 . - 0 ID=cds-HJH9161740.1;Parent=gene-O5D79_000158;Dbxref=NCBI_GP:HJH9161740.1;Name=HJH9161740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461387.1;locus_tag=O5D79_000158;product=hypothetical protein;protein_id=HJH9161740.1;transl_table=11 DALFDJ020000001.1 tpg gene 189070 189969 . - . ID=gene-O5D79_000159;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=O5D79_000159 DALFDJ020000001.1 Protein Homology CDS 189070 189969 . - 0 ID=cds-HJH9161741.1;Parent=gene-O5D79_000159;Dbxref=NCBI_GP:HJH9161741.1;Name=HJH9161741.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461386.1;locus_tag=O5D79_000159;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=HJH9161741.1;transl_table=11 DALFDJ020000001.1 tpg gene 189972 190841 . - . ID=gene-O5D79_000160;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=O5D79_000160 DALFDJ020000001.1 Protein Homology CDS 189972 190841 . - 0 ID=cds-HJH9161742.1;Parent=gene-O5D79_000160;Dbxref=NCBI_GP:HJH9161742.1;Name=HJH9161742.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461385.1;locus_tag=O5D79_000160;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=HJH9161742.1;transl_table=11 DALFDJ020000001.1 tpg gene 191054 191479 . + . ID=gene-O5D79_000161;Name=O5D79_000161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000161 DALFDJ020000001.1 Protein Homology CDS 191054 191479 . + 0 ID=cds-HJH9161743.1;Parent=gene-O5D79_000161;Dbxref=NCBI_GP:HJH9161743.1;Name=HJH9161743.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=O5D79_000161;product=GNAT family acetyltransferase;protein_id=HJH9161743.1;transl_table=11 DALFDJ020000001.1 tpg gene 191466 191915 . + . ID=gene-O5D79_000162;Name=O5D79_000162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000162 DALFDJ020000001.1 Protein Homology CDS 191466 191915 . + 0 ID=cds-HJH9161744.1;Parent=gene-O5D79_000162;Dbxref=NCBI_GP:HJH9161744.1;Name=HJH9161744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461383.1;locus_tag=O5D79_000162;product=DUF2919 domain-containing protein;protein_id=HJH9161744.1;transl_table=11 DALFDJ020000001.1 tpg gene 191977 192552 . + . ID=gene-O5D79_000163;Name=O5D79_000163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000163 DALFDJ020000001.1 Protein Homology CDS 191977 192552 . + 0 ID=cds-HJH9161745.1;Parent=gene-O5D79_000163;Dbxref=NCBI_GP:HJH9161745.1;Name=HJH9161745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461382.1;locus_tag=O5D79_000163;product=RpoE-regulated lipoprotein;protein_id=HJH9161745.1;transl_table=11 DALFDJ020000001.1 tpg gene 192647 193546 . + . ID=gene-O5D79_000164;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=O5D79_000164 DALFDJ020000001.1 Protein Homology CDS 192647 193546 . + 0 ID=cds-HJH9161746.1;Parent=gene-O5D79_000164;Dbxref=NCBI_GP:HJH9161746.1;Name=HJH9161746.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461381.1;locus_tag=O5D79_000164;product=porphyrinogen peroxidase;protein_id=HJH9161746.1;transl_table=11 DALFDJ020000001.1 tpg gene 193794 194585 . + . ID=gene-O5D79_000165;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=O5D79_000165 DALFDJ020000001.1 Protein Homology CDS 193794 194585 . + 0 ID=cds-HJH9161747.1;Parent=gene-O5D79_000165;Dbxref=NCBI_GP:HJH9161747.1;Name=HJH9161747.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461380.1;locus_tag=O5D79_000165;product=SDR family oxidoreductase UcpA;protein_id=HJH9161747.1;transl_table=11 DALFDJ020000001.1 tpg gene 194743 195759 . + . ID=gene-O5D79_000166;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=O5D79_000166 DALFDJ020000001.1 Protein Homology CDS 194743 195759 . + 0 ID=cds-HJH9161748.1;Parent=gene-O5D79_000166;Dbxref=NCBI_GP:HJH9161748.1;Name=HJH9161748.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461379.1;locus_tag=O5D79_000166;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=HJH9161748.1;transl_table=11 DALFDJ020000001.1 tpg gene 195759 196592 . + . ID=gene-O5D79_000167;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=O5D79_000167 DALFDJ020000001.1 Protein Homology CDS 195759 196592 . + 0 ID=cds-HJH9161749.1;Parent=gene-O5D79_000167;Dbxref=NCBI_GP:HJH9161749.1;Name=HJH9161749.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=O5D79_000167;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=HJH9161749.1;transl_table=11 DALFDJ020000001.1 tpg gene 196592 197467 . + . ID=gene-O5D79_000168;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=O5D79_000168 DALFDJ020000001.1 Protein Homology CDS 196592 197467 . + 0 ID=cds-HJH9161750.1;Parent=gene-O5D79_000168;Dbxref=NCBI_GP:HJH9161750.1;Name=HJH9161750.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461377.1;locus_tag=O5D79_000168;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=HJH9161750.1;transl_table=11 DALFDJ020000001.1 tpg gene 197457 198551 . + . ID=gene-O5D79_000169;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=O5D79_000169 DALFDJ020000001.1 Protein Homology CDS 197457 198551 . + 0 ID=cds-HJH9161751.1;Parent=gene-O5D79_000169;Dbxref=NCBI_GP:HJH9161751.1;Name=HJH9161751.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461376.1;locus_tag=O5D79_000169;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=HJH9161751.1;transl_table=11 DALFDJ020000001.1 tpg gene 198671 199582 . + . ID=gene-O5D79_000170;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=O5D79_000170 DALFDJ020000001.1 Protein Homology CDS 198671 199582 . + 0 ID=cds-HJH9161752.1;Parent=gene-O5D79_000170;Dbxref=NCBI_GP:HJH9161752.1;Name=HJH9161752.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=O5D79_000170;product=cysteine synthase CysM;protein_id=HJH9161752.1;transl_table=11 DALFDJ020000001.1 tpg gene 199615 199992 . - . ID=gene-O5D79_000171;Name=O5D79_000171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000171 DALFDJ020000001.1 Protein Homology CDS 199615 199992 . - 0 ID=cds-HJH9161753.1;Parent=gene-O5D79_000171;Dbxref=NCBI_GP:HJH9161753.1;Name=HJH9161753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000710726.1;locus_tag=O5D79_000171;product=YfeK family protein;protein_id=HJH9161753.1;transl_table=11 DALFDJ020000001.1 tpg gene 200051 200770 . - . ID=gene-O5D79_000172;Name=O5D79_000172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000172 DALFDJ020000001.1 Protein Homology CDS 200051 200770 . - 0 ID=cds-HJH9161754.1;Parent=gene-O5D79_000172;Dbxref=NCBI_GP:HJH9161754.1;Name=HJH9161754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461372.1;locus_tag=O5D79_000172;product=GMP synthase;protein_id=HJH9161754.1;transl_table=11 DALFDJ020000001.1 tpg gene 200785 202077 . - . ID=gene-O5D79_000173;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=O5D79_000173 DALFDJ020000001.1 Protein Homology CDS 200785 202077 . - 0 ID=cds-HJH9161755.1;Parent=gene-O5D79_000173;Dbxref=NCBI_GP:HJH9161755.1;Name=HJH9161755.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptsJ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461371.1;locus_tag=O5D79_000173;product=transcriptional regulator PtsJ;protein_id=HJH9161755.1;transl_table=11 DALFDJ020000001.1 tpg gene 202160 203026 . + . ID=gene-O5D79_000174;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=O5D79_000174 DALFDJ020000001.1 Protein Homology CDS 202160 203026 . + 0 ID=cds-HJH9161756.1;Parent=gene-O5D79_000174;Dbxref=NCBI_GP:HJH9161756.1;Name=HJH9161756.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461370.1;locus_tag=O5D79_000174;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=HJH9161756.1;transl_table=11 DALFDJ020000001.1 tpg gene 203023 203262 . + . ID=gene-O5D79_000175;Name=O5D79_000175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000175 DALFDJ020000001.1 Protein Homology CDS 203023 203262 . + 0 ID=cds-HJH9161757.1;Parent=gene-O5D79_000175;Dbxref=NCBI_GP:HJH9161757.1;Name=HJH9161757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461369.1;locus_tag=O5D79_000175;product=cytoplasmic protein;protein_id=HJH9161757.1;transl_table=11 DALFDJ020000001.1 tpg gene 203412 203921 . - . ID=gene-O5D79_000176;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=O5D79_000176 DALFDJ020000001.1 Protein Homology CDS 203412 203921 . - 0 ID=cds-HJH9161758.1;Parent=gene-O5D79_000176;Dbxref=NCBI_GP:HJH9161758.1;Name=HJH9161758.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=O5D79_000176;product=PTS glucose transporter subunit IIA;protein_id=HJH9161758.1;transl_table=11 DALFDJ020000001.1 tpg gene 203962 205689 . - . ID=gene-O5D79_000177;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=O5D79_000177 DALFDJ020000001.1 Protein Homology CDS 203962 205689 . - 0 ID=cds-HJH9161759.1;Parent=gene-O5D79_000177;Dbxref=NCBI_GP:HJH9161759.1;Name=HJH9161759.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870786.1;locus_tag=O5D79_000177;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=HJH9161759.1;transl_table=11 DALFDJ020000001.1 tpg gene 205738 205995 . - . ID=gene-O5D79_000178;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=O5D79_000178 DALFDJ020000001.1 Protein Homology CDS 205738 205995 . - 0 ID=cds-HJH9161760.1;Parent=gene-O5D79_000178;Dbxref=NCBI_GP:HJH9161760.1;Name=HJH9161760.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=O5D79_000178;product=phosphocarrier protein Hpr;protein_id=HJH9161760.1;transl_table=11 DALFDJ020000001.1 tpg gene 206379 207350 . - . ID=gene-O5D79_000179;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=O5D79_000179 DALFDJ020000001.1 Protein Homology CDS 206379 207350 . - 0 ID=cds-HJH9161761.1;Parent=gene-O5D79_000179;Dbxref=NCBI_GP:HJH9161761.1;Name=HJH9161761.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=O5D79_000179;product=cysteine synthase A;protein_id=HJH9161761.1;transl_table=11 DALFDJ020000001.1 tpg gene 207514 208275 . - . ID=gene-O5D79_000180;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=O5D79_000180 DALFDJ020000001.1 Protein Homology CDS 207514 208275 . - 0 ID=cds-HJH9161762.1;Parent=gene-O5D79_000180;Dbxref=NCBI_GP:HJH9161762.1;Name=HJH9161762.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461364.1;locus_tag=O5D79_000180;product=sulfate transporter CysZ;protein_id=HJH9161762.1;transl_table=11 DALFDJ020000001.1 tpg gene 208507 209493 . + . ID=gene-O5D79_000181;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=O5D79_000181 DALFDJ020000001.1 Protein Homology CDS 208507 209493 . + 0 ID=cds-HJH9161763.1;Parent=gene-O5D79_000181;Dbxref=NCBI_GP:HJH9161763.1;Name=HJH9161763.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461363.1;locus_tag=O5D79_000181;product=cell division protein ZipA;protein_id=HJH9161763.1;transl_table=11 DALFDJ020000001.1 tpg gene 209565 211580 . + . ID=gene-O5D79_000182;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=O5D79_000182 DALFDJ020000001.1 Protein Homology CDS 209565 211580 . + 0 ID=cds-HJH9161764.1;Parent=gene-O5D79_000182;Dbxref=NCBI_GP:HJH9161764.1;Name=HJH9161764.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461362.1;locus_tag=O5D79_000182;product=NAD-dependent DNA ligase LigA;protein_id=HJH9161764.1;transl_table=11 DALFDJ020000001.1 tpg gene 211582 211800 . + . ID=gene-O5D79_000183;Name=O5D79_000183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000183 DALFDJ020000001.1 Protein Homology CDS 211582 211800 . + 0 ID=cds-HJH9161765.1;Parent=gene-O5D79_000183;Dbxref=NCBI_GP:HJH9161765.1;Name=HJH9161765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=O5D79_000183;product=DUF3820 family protein;protein_id=HJH9161765.1;transl_table=11 DALFDJ020000001.1 tpg gene 211797 212795 . - . ID=gene-O5D79_000184;Name=O5D79_000184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000184 DALFDJ020000001.1 Protein Homology CDS 211797 212795 . - 0 ID=cds-HJH9161766.1;Parent=gene-O5D79_000184;Dbxref=NCBI_GP:HJH9161766.1;Name=HJH9161766.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461360.2;locus_tag=O5D79_000184;product=bile acid:sodium symporter family protein;protein_id=HJH9161766.1;transl_table=11 DALFDJ020000001.1 tpg gene 212885 213811 . + . ID=gene-O5D79_000185;Name=O5D79_000185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000185 DALFDJ020000001.1 Protein Homology CDS 212885 213811 . + 0 ID=cds-HJH9161767.1;Parent=gene-O5D79_000185;Dbxref=NCBI_GP:HJH9161767.1;Name=HJH9161767.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461359.1;locus_tag=O5D79_000185;product=LysR family transcriptional regulator;protein_id=HJH9161767.1;transl_table=11 DALFDJ020000001.1 tpg gene 213873 214634 . - . ID=gene-O5D79_000186;Name=O5D79_000186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000186 DALFDJ020000001.1 Protein Homology CDS 213873 214634 . - 0 ID=cds-HJH9161768.1;Parent=gene-O5D79_000186;Dbxref=NCBI_GP:HJH9161768.1;Name=HJH9161768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461358.1;locus_tag=O5D79_000186;product=outer membrane protein;protein_id=HJH9161768.1;transl_table=11 DALFDJ020000001.1 tpg gene 214890 215723 . + . ID=gene-O5D79_000187;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=O5D79_000187 DALFDJ020000001.1 Protein Homology CDS 214890 215723 . + 0 ID=cds-HJH9161769.1;Parent=gene-O5D79_000187;Dbxref=NCBI_GP:HJH9161769.1;Name=HJH9161769.1;Ontology_term=GO:0055086,GO:0004731,GO:0005737;gbkey=CDS;gene=xapA;go_component=cytoplasm|0005737||IEA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing small molecule metabolic process|0055086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448816.1;locus_tag=O5D79_000187;product=xanthosine phosphorylase;protein_id=HJH9161769.1;transl_table=11 DALFDJ020000001.1 tpg gene 215778 217034 . + . ID=gene-O5D79_000188;Name=O5D79_000188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000188 DALFDJ020000001.1 Protein Homology CDS 215778 217034 . + 0 ID=cds-HJH9161770.1;Parent=gene-O5D79_000188;Dbxref=NCBI_GP:HJH9161770.1;Name=HJH9161770.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461356.1;locus_tag=O5D79_000188;product=nucleoside permease;protein_id=HJH9161770.1;transl_table=11 DALFDJ020000001.1 tpg gene 217093 217251 . + . ID=gene-O5D79_000189;Name=O5D79_000189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000189 DALFDJ020000001.1 Protein Homology CDS 217093 217251 . + 0 ID=cds-HJH9161771.1;Parent=gene-O5D79_000189;Dbxref=NCBI_GP:HJH9161771.1;Name=HJH9161771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658729.1;locus_tag=O5D79_000189;product=XapX domain-containing protein;protein_id=HJH9161771.1;transl_table=11 DALFDJ020000001.1 tpg gene 217303 218187 . + . ID=gene-O5D79_000190;Name=O5D79_000190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000190 DALFDJ020000001.1 Protein Homology CDS 217303 218187 . + 0 ID=cds-HJH9161772.1;Parent=gene-O5D79_000190;Dbxref=NCBI_GP:HJH9161772.1;Name=HJH9161772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461355.1;locus_tag=O5D79_000190;product=LysR family transcriptional regulator;protein_id=HJH9161772.1;transl_table=11 DALFDJ020000001.1 tpg gene 218482 218557 . - . ID=gene-O5D79_000191;Name=O5D79_000191;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_000191 DALFDJ020000001.1 tRNAscan-SE tRNA 218482 218557 . - . ID=rna-O5D79_000191;Parent=gene-O5D79_000191;anticodon=(pos:complement(218522..218524));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_000191;product=tRNA-Lys DALFDJ020000001.1 tRNAscan-SE exon 218482 218557 . - . ID=exon-O5D79_000191-1;Parent=rna-O5D79_000191;anticodon=(pos:complement(218522..218524));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_000191;product=tRNA-Lys DALFDJ020000001.1 tpg gene 218562 218637 . - . ID=gene-O5D79_000192;Name=O5D79_000192;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_000192 DALFDJ020000001.1 tRNAscan-SE tRNA 218562 218637 . - . ID=rna-O5D79_000192;Parent=gene-O5D79_000192;anticodon=(pos:complement(218602..218604));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_000192;product=tRNA-Val DALFDJ020000001.1 tRNAscan-SE exon 218562 218637 . - . ID=exon-O5D79_000192-1;Parent=rna-O5D79_000192;anticodon=(pos:complement(218602..218604));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_000192;product=tRNA-Val DALFDJ020000001.1 tpg gene 218681 218756 . - . ID=gene-O5D79_000193;Name=O5D79_000193;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_000193 DALFDJ020000001.1 tRNAscan-SE tRNA 218681 218756 . - . ID=rna-O5D79_000193;Parent=gene-O5D79_000193;anticodon=(pos:complement(218721..218723));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_000193;product=tRNA-Val DALFDJ020000001.1 tRNAscan-SE exon 218681 218756 . - . ID=exon-O5D79_000193-1;Parent=rna-O5D79_000193;anticodon=(pos:complement(218721..218723));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_000193;product=tRNA-Val DALFDJ020000001.1 tpg gene 218802 218877 . - . ID=gene-O5D79_000194;Name=O5D79_000194;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_000194 DALFDJ020000001.1 tRNAscan-SE tRNA 218802 218877 . - . ID=rna-O5D79_000194;Parent=gene-O5D79_000194;anticodon=(pos:complement(218842..218844));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_000194;product=tRNA-Val DALFDJ020000001.1 tRNAscan-SE exon 218802 218877 . - . ID=exon-O5D79_000194-1;Parent=rna-O5D79_000194;anticodon=(pos:complement(218842..218844));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_000194;product=tRNA-Val DALFDJ020000001.1 tpg gene 219136 220551 . + . ID=gene-O5D79_000195;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=O5D79_000195 DALFDJ020000001.1 Protein Homology CDS 219136 220551 . + 0 ID=cds-HJH9161773.1;Parent=gene-O5D79_000195;Dbxref=NCBI_GP:HJH9161773.1;Name=HJH9161773.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461354.1;locus_tag=O5D79_000195;product=glutamate--tRNA ligase;protein_id=HJH9161773.1;transl_table=11 DALFDJ020000001.1 tpg gene 220605 220997 . - . ID=gene-O5D79_000196;Name=O5D79_000196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000196 DALFDJ020000001.1 Protein Homology CDS 220605 220997 . - 0 ID=cds-HJH9161774.1;Parent=gene-O5D79_000196;Dbxref=NCBI_GP:HJH9161774.1;Name=HJH9161774.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461353.1;locus_tag=O5D79_000196;product=MerR family transcriptional regulator;protein_id=HJH9161774.1;transl_table=11 DALFDJ020000001.1 tpg gene 220999 221361 . - . ID=gene-O5D79_000197;Name=O5D79_000197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000197 DALFDJ020000001.1 Protein Homology CDS 220999 221361 . - 0 ID=cds-HJH9161775.1;Parent=gene-O5D79_000197;Dbxref=NCBI_GP:HJH9161775.1;Name=HJH9161775.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461352.1;locus_tag=O5D79_000197;product=MerR family transcriptional regulator;protein_id=HJH9161775.1;transl_table=11 DALFDJ020000001.1 tpg gene 221583 221658 . + . ID=gene-O5D79_000198;Name=O5D79_000198;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_000198 DALFDJ020000001.1 tRNAscan-SE tRNA 221583 221658 . + . ID=rna-O5D79_000198;Parent=gene-O5D79_000198;anticodon=(pos:221616..221618);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_000198;product=tRNA-Ala DALFDJ020000001.1 tRNAscan-SE exon 221583 221658 . + . ID=exon-O5D79_000198-1;Parent=rna-O5D79_000198;anticodon=(pos:221616..221618);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_000198;product=tRNA-Ala DALFDJ020000001.1 tpg gene 221701 221776 . + . ID=gene-O5D79_000199;Name=O5D79_000199;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_000199 DALFDJ020000001.1 tRNAscan-SE tRNA 221701 221776 . + . ID=rna-O5D79_000199;Parent=gene-O5D79_000199;anticodon=(pos:221734..221736);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_000199;product=tRNA-Ala DALFDJ020000001.1 tRNAscan-SE exon 221701 221776 . + . ID=exon-O5D79_000199-1;Parent=rna-O5D79_000199;anticodon=(pos:221734..221736);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_000199;product=tRNA-Ala DALFDJ020000001.1 tpg gene 221967 224156 . + . ID=gene-O5D79_000200;Name=O5D79_000200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000200 DALFDJ020000001.1 Protein Homology CDS 221967 224156 . + 0 ID=cds-HJH9161776.1;Parent=gene-O5D79_000200;Dbxref=NCBI_GP:HJH9161776.1;Name=HJH9161776.1;Ontology_term=GO:0000160,GO:0007165,GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461351.1;locus_tag=O5D79_000200;product=EAL domain-containing protein;protein_id=HJH9161776.1;transl_table=11 DALFDJ020000001.1 tpg gene 224209 225411 . - . ID=gene-O5D79_000201;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=O5D79_000201 DALFDJ020000001.1 Protein Homology CDS 224209 225411 . - 0 ID=cds-HJH9161777.1;Parent=gene-O5D79_000201;Dbxref=NCBI_GP:HJH9161777.1;Name=HJH9161777.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461350.1;locus_tag=O5D79_000201;product=nucleoside permease NupC;protein_id=HJH9161777.1;transl_table=11 DALFDJ020000001.1 tpg gene 225717 225761 . + . ID=gene-O5D79_000202;Name=O5D79_000202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000202 DALFDJ020000001.1 Protein Homology CDS 225717 225761 . + 0 ID=cds-HJH9161778.1;Parent=gene-O5D79_000202;Dbxref=NCBI_GP:HJH9161778.1;Name=HJH9161778.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049535.1;locus_tag=O5D79_000202;product=hypothetical protein;protein_id=HJH9161778.1;transl_table=11 DALFDJ020000001.1 tpg gene 225754 226995 . + . ID=gene-O5D79_000203;Name=O5D79_000203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000203 DALFDJ020000001.1 Protein Homology CDS 225754 226995 . + 0 ID=cds-HJH9161779.1;Parent=gene-O5D79_000203;Dbxref=NCBI_GP:HJH9161779.1;Name=HJH9161779.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461349.1;locus_tag=O5D79_000203;product=Nramp family divalent metal transporter;protein_id=HJH9161779.1;transl_table=11 DALFDJ020000001.1 tpg gene 227056 227382 . - . ID=gene-O5D79_000204;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=O5D79_000204 DALFDJ020000001.1 Protein Homology CDS 227056 227382 . - 0 ID=cds-HJH9161780.1;Parent=gene-O5D79_000204;Dbxref=NCBI_GP:HJH9161780.1;Name=HJH9161780.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461348.1;locus_tag=O5D79_000204;product=DUF2502 domain-containing protein YpeC;protein_id=HJH9161780.1;transl_table=11 DALFDJ020000001.1 tpg gene 227496 228494 . - . ID=gene-O5D79_000205;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=O5D79_000205 DALFDJ020000001.1 Protein Homology CDS 227496 228494 . - 0 ID=cds-HJH9161781.1;Parent=gene-O5D79_000205;Dbxref=NCBI_GP:HJH9161781.1;Name=HJH9161781.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461347.1;locus_tag=O5D79_000205;product=L-glyceraldehyde 3-phosphate reductase;protein_id=HJH9161781.1;transl_table=11 DALFDJ020000001.1 tpg gene 228674 230326 . + . ID=gene-O5D79_000206;Name=O5D79_000206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000206 DALFDJ020000001.1 Protein Homology CDS 228674 230326 . + 0 ID=cds-HJH9161782.1;Parent=gene-O5D79_000206;Dbxref=NCBI_GP:HJH9161782.1;Name=HJH9161782.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461346.1;locus_tag=O5D79_000206;product=alpha-keto acid decarboxylase family protein;protein_id=HJH9161782.1;transl_table=11 DALFDJ020000001.1 tpg gene 230346 231581 . - . ID=gene-O5D79_000207;Name=O5D79_000207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000207 DALFDJ020000001.1 Protein Homology CDS 230346 231581 . - 0 ID=cds-HJH9161783.1;Parent=gene-O5D79_000207;Dbxref=NCBI_GP:HJH9161783.1;Name=HJH9161783.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461345.1;locus_tag=O5D79_000207;product=ion channel protein;protein_id=HJH9161783.1;transl_table=11 DALFDJ020000001.1 tpg gene 231785 232750 . + . ID=gene-O5D79_000208;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=O5D79_000208 DALFDJ020000001.1 Protein Homology CDS 231785 232750 . + 0 ID=cds-HJH9161784.1;Parent=gene-O5D79_000208;Dbxref=NCBI_GP:HJH9161784.1;Name=HJH9161784.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461344.1;locus_tag=O5D79_000208;product=glucokinase;protein_id=HJH9161784.1;transl_table=11 DALFDJ020000001.1 tpg gene 233471 234709 . + . ID=gene-O5D79_000209;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=O5D79_000209 DALFDJ020000001.1 Protein Homology CDS 233471 234709 . + 0 ID=cds-HJH9161785.1;Parent=gene-O5D79_000209;Dbxref=NCBI_GP:HJH9161785.1;Name=HJH9161785.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461343.1;locus_tag=O5D79_000209;product=alanine transaminase;protein_id=HJH9161785.1;transl_table=11 DALFDJ020000001.1 tpg gene 234759 234830 . - . ID=gene-O5D79_000210;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=O5D79_000210 DALFDJ020000001.1 Protein Homology CDS 234759 234830 . - 0 ID=cds-HJH9161786.1;Parent=gene-O5D79_000210;Dbxref=NCBI_GP:HJH9161786.1;Name=HJH9161786.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=O5D79_000210;product=membrane protein YpdK;protein_id=HJH9161786.1;transl_table=11 DALFDJ020000001.1 tpg gene 235233 236153 . - . ID=gene-O5D79_000211;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=O5D79_000211 DALFDJ020000001.1 Protein Homology CDS 235233 236153 . - 0 ID=cds-HJH9161787.1;Parent=gene-O5D79_000211;Dbxref=NCBI_GP:HJH9161787.1;Name=HJH9161787.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461342.1;locus_tag=O5D79_000211;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=HJH9161787.1;transl_table=11 DALFDJ020000001.1 tpg gene 236675 236917 . + . ID=gene-O5D79_000212;Name=O5D79_000212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000212 DALFDJ020000001.1 Protein Homology CDS 236675 236917 . + 0 ID=cds-HJH9161788.1;Parent=gene-O5D79_000212;Dbxref=NCBI_GP:HJH9161788.1;Name=HJH9161788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461341.1;locus_tag=O5D79_000212;product=YfdY family protein;protein_id=HJH9161788.1;transl_table=11 DALFDJ020000001.1 tpg gene 237156 238547 . - . ID=gene-O5D79_000213;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=O5D79_000213 DALFDJ020000001.1 Protein Homology CDS 237156 238547 . - 0 ID=cds-HJH9161789.1;Parent=gene-O5D79_000213;Dbxref=NCBI_GP:HJH9161789.1;Name=HJH9161789.1;Ontology_term=GO:0015760,GO:0035435,GO:0061513;gbkey=CDS;gene=pgtP;go_function=glucose 6-phosphate:phosphate antiporter activity|0061513||IEA;go_process=glucose-6-phosphate transport|0015760||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461340.1;locus_tag=O5D79_000213;product=phosphoglycerate transporter PgtP;protein_id=HJH9161789.1;transl_table=11 DALFDJ020000001.1 tpg gene 238983 240176 . + . ID=gene-O5D79_000214;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=O5D79_000214 DALFDJ020000001.1 Protein Homology CDS 238983 240176 . + 0 ID=cds-HJH9161790.1;Parent=gene-O5D79_000214;Dbxref=NCBI_GP:HJH9161790.1;Name=HJH9161790.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461339.1;locus_tag=O5D79_000214;product=phosphoglycerate transport regulator PgtC;protein_id=HJH9161790.1;transl_table=11 DALFDJ020000001.1 tpg gene 240173 242179 . + . ID=gene-O5D79_000215;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=O5D79_000215 DALFDJ020000001.1 Protein Homology CDS 240173 242179 . + 0 ID=cds-HJH9161791.1;Parent=gene-O5D79_000215;Dbxref=NCBI_GP:HJH9161791.1;Name=HJH9161791.1;Ontology_term=GO:0000160,GO:0000155,GO:0005524;gbkey=CDS;gene=pgtB;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461338.1;locus_tag=O5D79_000215;product=two-component system sensor histidine kinase PgtB;protein_id=HJH9161791.1;transl_table=11 DALFDJ020000001.1 tpg gene 242169 243416 . + . ID=gene-O5D79_000216;Name=pgtA;gbkey=Gene;gene=pgtA;gene_biotype=protein_coding;locus_tag=O5D79_000216 DALFDJ020000001.1 Protein Homology CDS 242169 243416 . + 0 ID=cds-HJH9161792.1;Parent=gene-O5D79_000216;Dbxref=NCBI_GP:HJH9161792.1;Name=HJH9161792.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;gene=pgtA;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461337.1;locus_tag=O5D79_000216;product=two-component system response regulator PgtA;protein_id=HJH9161792.1;transl_table=11 DALFDJ020000001.1 tpg gene 243684 244622 . + . ID=gene-O5D79_000217;Name=pgtE;gbkey=Gene;gene=pgtE;gene_biotype=protein_coding;locus_tag=O5D79_000217 DALFDJ020000001.1 Protein Homology CDS 243684 244622 . + 0 ID=cds-HJH9161793.1;Parent=gene-O5D79_000217;Dbxref=NCBI_GP:HJH9161793.1;Name=HJH9161793.1;gbkey=CDS;gene=pgtE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461336.1;locus_tag=O5D79_000217;product=omptin family outer membrane protease PgtE;protein_id=HJH9161793.1;transl_table=11 DALFDJ020000001.1 tpg gene 244779 244853 . - . ID=gene-O5D79_000218;Name=O5D79_000218;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_000218 DALFDJ020000001.1 tRNAscan-SE tRNA 244779 244853 . - . ID=rna-O5D79_000218;Parent=gene-O5D79_000218;anticodon=(pos:complement(244818..244820));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_000218;product=tRNA-Arg DALFDJ020000001.1 tRNAscan-SE exon 244779 244853 . - . ID=exon-O5D79_000218-1;Parent=rna-O5D79_000218;anticodon=(pos:complement(244818..244820));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_000218;product=tRNA-Arg DALFDJ020000001.1 tpg gene 244929 245870 . - . ID=gene-O5D79_000219;Name=O5D79_000219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000219 DALFDJ020000001.1 Protein Homology CDS 244929 245870 . - 0 ID=cds-HJH9161794.1;Parent=gene-O5D79_000219;Dbxref=NCBI_GP:HJH9161794.1;Name=HJH9161794.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461335.1;locus_tag=O5D79_000219;product=formate/nitrite transporter family protein;protein_id=HJH9161794.1;transl_table=11 DALFDJ020000001.1 tpg gene 246159 246914 . + . ID=gene-O5D79_000220;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=O5D79_000220 DALFDJ020000001.1 Protein Homology CDS 246159 246914 . + 0 ID=cds-HJH9161795.1;Parent=gene-O5D79_000220;Dbxref=NCBI_GP:HJH9161795.1;Name=HJH9161795.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461334.1;locus_tag=O5D79_000220;product=phospholipid-binding lipoprotein MlaA;protein_id=HJH9161795.1;transl_table=11 DALFDJ020000001.1 tpg gene 246975 248282 . - . ID=gene-O5D79_000221;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=O5D79_000221 DALFDJ020000001.1 Protein Homology CDS 246975 248282 . - 0 ID=cds-HJH9161796.1;Parent=gene-O5D79_000221;Dbxref=NCBI_GP:HJH9161796.1;Name=HJH9161796.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=O5D79_000221;product=long-chain fatty acid transporter FadL;protein_id=HJH9161796.1;transl_table=11 DALFDJ020000001.1 tpg gene 248653 248937 . + . ID=gene-O5D79_000222;Name=O5D79_000222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000222 DALFDJ020000001.1 Protein Homology CDS 248653 248937 . + 0 ID=cds-HJH9161797.1;Parent=gene-O5D79_000222;Dbxref=NCBI_GP:HJH9161797.1;Name=HJH9161797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=O5D79_000222;product=YfcZ/YiiS family protein;protein_id=HJH9161797.1;transl_table=11 DALFDJ020000001.1 tpg gene 249115 250425 . + . ID=gene-O5D79_000223;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=O5D79_000223 DALFDJ020000001.1 Protein Homology CDS 249115 250425 . + 0 ID=cds-HJH9161798.1;Parent=gene-O5D79_000223;Dbxref=NCBI_GP:HJH9161798.1;Name=HJH9161798.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461331.2;locus_tag=O5D79_000223;product=acetyl-CoA C-acyltransferase FadI;protein_id=HJH9161798.1;transl_table=11 DALFDJ020000001.1 tpg gene 250425 252572 . + . ID=gene-O5D79_000224;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=O5D79_000224 DALFDJ020000001.1 Protein Homology CDS 250425 252572 . + 0 ID=cds-HJH9161799.1;Parent=gene-O5D79_000224;Dbxref=NCBI_GP:HJH9161799.1;Name=HJH9161799.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461330.1;locus_tag=O5D79_000224;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=HJH9161799.1;transl_table=11 DALFDJ020000001.1 tpg gene 252781 253266 . + . ID=gene-O5D79_000225;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=O5D79_000225 DALFDJ020000001.1 Protein Homology CDS 252781 253266 . + 0 ID=cds-HJH9161800.1;Parent=gene-O5D79_000225;Dbxref=NCBI_GP:HJH9161800.1;Name=HJH9161800.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=O5D79_000225;product=phosphohistidine phosphatase SixA;protein_id=HJH9161800.1;transl_table=11 DALFDJ020000001.1 tpg gene 253366 253917 . - . ID=gene-O5D79_000226;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=O5D79_000226 DALFDJ020000001.1 Protein Homology CDS 253366 253917 . - 0 ID=cds-HJH9161801.1;Parent=gene-O5D79_000226;Dbxref=NCBI_GP:HJH9161801.1;Name=HJH9161801.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461328.1;locus_tag=O5D79_000226;product=endonuclease SmrB;protein_id=HJH9161801.1;transl_table=11 DALFDJ020000001.1 tpg gene 254083 255015 . + . ID=gene-O5D79_000227;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=O5D79_000227 DALFDJ020000001.1 Protein Homology CDS 254083 255015 . + 0 ID=cds-HJH9161802.1;Parent=gene-O5D79_000227;Dbxref=NCBI_GP:HJH9161802.1;Name=HJH9161802.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=O5D79_000227;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=HJH9161802.1;transl_table=11 DALFDJ020000001.1 tpg gene 255051 256136 . + . ID=gene-O5D79_000228;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=O5D79_000228 DALFDJ020000001.1 Protein Homology CDS 255051 256136 . + 0 ID=cds-HJH9161803.1;Parent=gene-O5D79_000228;Dbxref=NCBI_GP:HJH9161803.1;Name=HJH9161803.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=O5D79_000228;product=chorismate synthase;protein_id=HJH9161803.1;transl_table=11 DALFDJ020000001.1 tpg gene 256140 256964 . + . ID=gene-O5D79_000229;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=O5D79_000229 DALFDJ020000001.1 Protein Homology CDS 256140 256964 . + 0 ID=cds-HJH9161804.1;Parent=gene-O5D79_000229;Dbxref=NCBI_GP:HJH9161804.1;Name=HJH9161804.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461325.1;locus_tag=O5D79_000229;product=penicillin-insensitive murein endopeptidase;protein_id=HJH9161804.1;transl_table=11 DALFDJ020000001.1 tpg gene 256964 257773 . + . ID=gene-O5D79_000230;Name=O5D79_000230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000230 DALFDJ020000001.1 Protein Homology CDS 256964 257773 . + 0 ID=cds-HJH9161805.1;Parent=gene-O5D79_000230;Dbxref=NCBI_GP:HJH9161805.1;Name=HJH9161805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461324.1;locus_tag=O5D79_000230;product=sulfite exporter TauE/SafE family protein;protein_id=HJH9161805.1;transl_table=11 DALFDJ020000001.1 tpg gene 257773 258321 . + . ID=gene-O5D79_000231;Name=O5D79_000231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000231 DALFDJ020000001.1 Protein Homology CDS 257773 258321 . + 0 ID=cds-HJH9161806.1;Parent=gene-O5D79_000231;Dbxref=NCBI_GP:HJH9161806.1;Name=HJH9161806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461323.1;locus_tag=O5D79_000231;product=elongation factor P hydroxylase;protein_id=HJH9161806.1;transl_table=11 DALFDJ020000001.1 tpg gene 258354 258629 . + . ID=gene-O5D79_000232;Name=O5D79_000232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000232 DALFDJ020000001.1 Protein Homology CDS 258354 258629 . + 0 ID=cds-HJH9161807.1;Parent=gene-O5D79_000232;Dbxref=NCBI_GP:HJH9161807.1;Name=HJH9161807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461322.1;locus_tag=O5D79_000232;product=YfcL family protein;protein_id=HJH9161807.1;transl_table=11 DALFDJ020000001.1 tpg gene 258681 260681 . - . ID=gene-O5D79_000233;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=O5D79_000233 DALFDJ020000001.1 Protein Homology CDS 258681 260681 . - 0 ID=cds-HJH9161808.1;Parent=gene-O5D79_000233;Dbxref=NCBI_GP:HJH9161808.1;Name=HJH9161808.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540542.1;locus_tag=O5D79_000233;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=HJH9161808.1;transl_table=11 DALFDJ020000001.1 tpg gene 260841 262055 . + . ID=gene-O5D79_000234;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=O5D79_000234 DALFDJ020000001.1 Protein Homology CDS 260841 262055 . + 0 ID=cds-HJH9161809.1;Parent=gene-O5D79_000234;Dbxref=NCBI_GP:HJH9161809.1;Name=HJH9161809.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461320.1;locus_tag=O5D79_000234;product=beta-ketoacyl-ACP synthase I;protein_id=HJH9161809.1;transl_table=11 DALFDJ020000001.1 tpg gene 262153 262809 . + . ID=gene-O5D79_000235;Name=O5D79_000235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000235 DALFDJ020000001.1 Protein Homology CDS 262153 262809 . + 0 ID=cds-HJH9161810.1;Parent=gene-O5D79_000235;Dbxref=NCBI_GP:HJH9161810.1;Name=HJH9161810.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461319.1;locus_tag=O5D79_000235;product=CPBP family intramembrane glutamic endopeptidase;protein_id=HJH9161810.1;transl_table=11 DALFDJ020000001.1 tpg gene 262876 263394 . - . ID=gene-O5D79_000236;Name=O5D79_000236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000236 DALFDJ020000001.1 Protein Homology CDS 262876 263394 . - 0 ID=cds-HJH9161811.1;Parent=gene-O5D79_000236;Dbxref=NCBI_GP:HJH9161811.1;Name=HJH9161811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461318.1;locus_tag=O5D79_000236;product=YbjP/YqhG family protein;protein_id=HJH9161811.1;transl_table=11 DALFDJ020000001.1 tpg gene 263394 263762 . - . ID=gene-O5D79_000237;Name=O5D79_000237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000237 DALFDJ020000001.1 Protein Homology CDS 263394 263762 . - 0 ID=cds-HJH9161812.1;Parent=gene-O5D79_000237;Dbxref=NCBI_GP:HJH9161812.1;Name=HJH9161812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461317.1;locus_tag=O5D79_000237;product=NlpC/P60 family protein;protein_id=HJH9161812.1;transl_table=11 DALFDJ020000001.1 tpg gene 263931 264179 . - . ID=gene-O5D79_000238;Name=O5D79_000238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000238 DALFDJ020000001.1 Protein Homology CDS 263931 264179 . - 0 ID=cds-HJH9161813.1;Parent=gene-O5D79_000238;Dbxref=NCBI_GP:HJH9161813.1;Name=HJH9161813.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461316.1;locus_tag=O5D79_000238;product=helix-turn-helix domain-containing protein;protein_id=HJH9161813.1;transl_table=11 DALFDJ020000001.1 tpg gene 264352 264726 . + . ID=gene-O5D79_000239;Name=O5D79_000239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000239 DALFDJ020000001.1 Protein Homology CDS 264352 264726 . + 0 ID=cds-HJH9161814.1;Parent=gene-O5D79_000239;Dbxref=NCBI_GP:HJH9161814.1;Name=HJH9161814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461315.1;locus_tag=O5D79_000239;product=hypothetical protein;protein_id=HJH9161814.1;transl_table=11 DALFDJ020000001.1 tpg gene 264906 266084 . + . ID=gene-O5D79_000240;Name=O5D79_000240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000240 DALFDJ020000001.1 Protein Homology CDS 264906 266084 . + 0 ID=cds-HJH9161815.1;Parent=gene-O5D79_000240;Dbxref=NCBI_GP:HJH9161815.1;Name=HJH9161815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461314.1;locus_tag=O5D79_000240;product=MFS transporter;protein_id=HJH9161815.1;transl_table=11 DALFDJ020000001.1 tpg gene 266081 267082 . - . ID=gene-O5D79_000241;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=O5D79_000241 DALFDJ020000001.1 Protein Homology CDS 266081 267082 . - 0 ID=cds-HJH9161816.1;Parent=gene-O5D79_000241;Dbxref=NCBI_GP:HJH9161816.1;Name=HJH9161816.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461313.1;locus_tag=O5D79_000241;product=flagella biosynthesis regulator Flk;protein_id=HJH9161816.1;transl_table=11 DALFDJ020000001.1 tpg gene 267186 268322 . + . ID=gene-O5D79_000242;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=O5D79_000242 DALFDJ020000001.1 Protein Homology CDS 267186 268322 . + 0 ID=cds-HJH9161817.1;Parent=gene-O5D79_000242;Dbxref=NCBI_GP:HJH9161817.1;Name=HJH9161817.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461312.1;locus_tag=O5D79_000242;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=HJH9161817.1;transl_table=11 DALFDJ020000001.1 tpg gene 268390 269403 . + . ID=gene-O5D79_000243;Name=O5D79_000243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000243 DALFDJ020000001.1 Protein Homology CDS 268390 269403 . + 0 ID=cds-HJH9161818.1;Parent=gene-O5D79_000243;Dbxref=NCBI_GP:HJH9161818.1;Name=HJH9161818.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461311.1;locus_tag=O5D79_000243;product=aspartate-semialdehyde dehydrogenase;protein_id=HJH9161818.1;transl_table=11 DALFDJ020000001.1 tpg gene 269403 270215 . + . ID=gene-O5D79_000244;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=O5D79_000244 DALFDJ020000001.1 Protein Homology CDS 269403 270215 . + 0 ID=cds-HJH9161819.1;Parent=gene-O5D79_000244;Dbxref=NCBI_GP:HJH9161819.1;Name=HJH9161819.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461310.1;locus_tag=O5D79_000244;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=HJH9161819.1;transl_table=11 DALFDJ020000001.1 tpg gene 270264 270923 . + . ID=gene-O5D79_000245;Name=O5D79_000245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000245 DALFDJ020000001.1 Protein Homology CDS 270264 270923 . + 0 ID=cds-HJH9161820.1;Parent=gene-O5D79_000245;Dbxref=NCBI_GP:HJH9161820.1;Name=HJH9161820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461309.1;locus_tag=O5D79_000245;product=DedA family protein;protein_id=HJH9161820.1;transl_table=11 DALFDJ020000001.1 tpg gene 271073 271987 . + . ID=gene-O5D79_000246;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=O5D79_000246 DALFDJ020000001.1 Protein Homology CDS 271073 271987 . + 0 ID=cds-HJH9161821.1;Parent=gene-O5D79_000246;Dbxref=NCBI_GP:HJH9161821.1;Name=HJH9161821.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461308.1;locus_tag=O5D79_000246;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=HJH9161821.1;transl_table=11 DALFDJ020000001.1 tpg gene 272055 273323 . + . ID=gene-O5D79_000247;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=O5D79_000247 DALFDJ020000001.1 Protein Homology CDS 272055 273323 . + 0 ID=cds-HJH9161822.1;Parent=gene-O5D79_000247;Dbxref=NCBI_GP:HJH9161822.1;Name=HJH9161822.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=O5D79_000247;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=HJH9161822.1;transl_table=11 DALFDJ020000001.1 tpg gene 273313 273987 . + . ID=gene-O5D79_000248;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=O5D79_000248 DALFDJ020000001.1 Protein Homology CDS 273313 273987 . + 0 ID=cds-HJH9161823.1;Parent=gene-O5D79_000248;Dbxref=NCBI_GP:HJH9161823.1;Name=HJH9161823.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=O5D79_000248;product=cell division protein DedD;protein_id=HJH9161823.1;transl_table=11 DALFDJ020000001.1 tpg gene 274298 274786 . + . ID=gene-O5D79_000249;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=O5D79_000249 DALFDJ020000001.1 Protein Homology CDS 274298 274786 . + 0 ID=cds-HJH9161824.1;Parent=gene-O5D79_000249;Dbxref=NCBI_GP:HJH9161824.1;Name=HJH9161824.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461305.1;locus_tag=O5D79_000249;product=colicin V production protein;protein_id=HJH9161824.1;transl_table=11 DALFDJ020000001.1 tpg gene 274824 276341 . + . ID=gene-O5D79_000250;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=O5D79_000250 DALFDJ020000001.1 Protein Homology CDS 274824 276341 . + 0 ID=cds-HJH9161825.1;Parent=gene-O5D79_000250;Dbxref=NCBI_GP:HJH9161825.1;Name=HJH9161825.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=O5D79_000250;product=amidophosphoribosyltransferase;protein_id=HJH9161825.1;transl_table=11 DALFDJ020000001.1 tpg gene 276377 277804 . - . ID=gene-O5D79_000251;Name=O5D79_000251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000251 DALFDJ020000001.1 Protein Homology CDS 276377 277804 . - 0 ID=cds-HJH9161826.1;Parent=gene-O5D79_000251;Dbxref=NCBI_GP:HJH9161826.1;Name=HJH9161826.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461303.1;locus_tag=O5D79_000251;product=sigma-54 interaction domain-containing protein;protein_id=HJH9161826.1;transl_table=11 DALFDJ020000001.1 tpg gene 278015 279412 . + . ID=gene-O5D79_000252;Name=O5D79_000252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000252 DALFDJ020000001.1 Protein Homology CDS 278015 279412 . + 0 ID=cds-HJH9161827.1;Parent=gene-O5D79_000252;Dbxref=NCBI_GP:HJH9161827.1;Name=HJH9161827.1;Ontology_term=GO:0016831,GO:0030170;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461302.1;locus_tag=O5D79_000252;product=diaminopimelate decarboxylase family protein;protein_id=HJH9161827.1;transl_table=11 DALFDJ020000001.1 tpg gene 279503 280924 . + . ID=gene-O5D79_000253;Name=O5D79_000253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000253 DALFDJ020000001.1 Protein Homology CDS 279503 280924 . + 0 ID=cds-HJH9161828.1;Parent=gene-O5D79_000253;Dbxref=NCBI_GP:HJH9161828.1;Name=HJH9161828.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461301.1;locus_tag=O5D79_000253;product=APC family permease;protein_id=HJH9161828.1;transl_table=11 DALFDJ020000001.1 tpg gene 280926 282029 . + . ID=gene-O5D79_000254;Name=O5D79_000254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000254 DALFDJ020000001.1 Protein Homology CDS 280926 282029 . + 0 ID=cds-HJH9161829.1;Parent=gene-O5D79_000254;Dbxref=NCBI_GP:HJH9161829.1;Name=HJH9161829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461300.1;locus_tag=O5D79_000254;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=HJH9161829.1;transl_table=11 DALFDJ020000001.1 tpg gene 282093 283499 . + . ID=gene-O5D79_000255;Name=O5D79_000255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000255 DALFDJ020000001.1 Protein Homology CDS 282093 283499 . + 0 ID=cds-HJH9161830.1;Parent=gene-O5D79_000255;Dbxref=NCBI_GP:HJH9161830.1;Name=HJH9161830.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461299.1;locus_tag=O5D79_000255;product=amino acid permease;protein_id=HJH9161830.1;transl_table=11 DALFDJ020000001.1 tpg gene 283526 284095 . + . ID=gene-O5D79_000256;Name=O5D79_000256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000256 DALFDJ020000001.1 Protein Homology CDS 283526 284095 . + 0 ID=cds-HJH9161831.1;Parent=gene-O5D79_000256;Dbxref=NCBI_GP:HJH9161831.1;Name=HJH9161831.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461298.1;locus_tag=O5D79_000256;product=UbiX family flavin prenyltransferase;protein_id=HJH9161831.1;transl_table=11 DALFDJ020000001.1 tpg gene 284384 285166 . + . ID=gene-O5D79_000257;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=O5D79_000257 DALFDJ020000001.1 Protein Homology CDS 284384 285166 . + 0 ID=cds-HJH9161832.1;Parent=gene-O5D79_000257;Dbxref=NCBI_GP:HJH9161832.1;Name=HJH9161832.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=O5D79_000257;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=HJH9161832.1;transl_table=11 DALFDJ020000001.1 tpg gene 285404 286186 . + . ID=gene-O5D79_000258;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=O5D79_000258 DALFDJ020000001.1 Protein Homology CDS 285404 286186 . + 0 ID=cds-HJH9161833.1;Parent=gene-O5D79_000258;Dbxref=NCBI_GP:HJH9161833.1;Name=HJH9161833.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461296.1;locus_tag=O5D79_000258;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=HJH9161833.1;transl_table=11 DALFDJ020000001.1 tpg gene 286369 287055 . + . ID=gene-O5D79_000259;Name=O5D79_000259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000259 DALFDJ020000001.1 Protein Homology CDS 286369 287055 . + 0 ID=cds-HJH9161834.1;Parent=gene-O5D79_000259;Dbxref=NCBI_GP:HJH9161834.1;Name=HJH9161834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=O5D79_000259;product=histidine ABC transporter permease HisQ;protein_id=HJH9161834.1;transl_table=11 DALFDJ020000001.1 tpg gene 287052 287759 . + . ID=gene-O5D79_000260;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=O5D79_000260 DALFDJ020000001.1 Protein Homology CDS 287052 287759 . + 0 ID=cds-HJH9161835.1;Parent=gene-O5D79_000260;Dbxref=NCBI_GP:HJH9161835.1;Name=HJH9161835.1;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461294.1;locus_tag=O5D79_000260;product=histidine ABC transporter permease HisM;protein_id=HJH9161835.1;transl_table=11 DALFDJ020000001.1 tpg gene 287773 288546 . + . ID=gene-O5D79_000261;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=O5D79_000261 DALFDJ020000001.1 Protein Homology CDS 287773 288546 . + 0 ID=cds-HJH9161836.1;Parent=gene-O5D79_000261;Dbxref=NCBI_GP:HJH9161836.1;Name=HJH9161836.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=O5D79_000261;product=histidine ABC transporter ATP-binding protein HisP;protein_id=HJH9161836.1;transl_table=11 DALFDJ020000001.1 tpg gene 288598 289491 . - . ID=gene-O5D79_000262;Name=O5D79_000262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000262 DALFDJ020000001.1 Protein Homology CDS 288598 289491 . - 0 ID=cds-HJH9161837.1;Parent=gene-O5D79_000262;Dbxref=NCBI_GP:HJH9161837.1;Name=HJH9161837.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461292.1;locus_tag=O5D79_000262;product=TIGR01777 family oxidoreductase;protein_id=HJH9161837.1;transl_table=11 DALFDJ020000001.1 tpg gene 289617 290264 . - . ID=gene-O5D79_000263;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=O5D79_000263 DALFDJ020000001.1 Protein Homology CDS 289617 290264 . - 0 ID=cds-HJH9161838.1;Parent=gene-O5D79_000263;Dbxref=NCBI_GP:HJH9161838.1;Name=HJH9161838.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461291.1;locus_tag=O5D79_000263;product=GSH-dependent disulfide bond oxidoreductase;protein_id=HJH9161838.1;transl_table=11 DALFDJ020000001.1 tpg gene 290407 291051 . + . ID=gene-O5D79_000264;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=O5D79_000264 DALFDJ020000001.1 Protein Homology CDS 290407 291051 . + 0 ID=cds-HJH9161839.1;Parent=gene-O5D79_000264;Dbxref=NCBI_GP:HJH9161839.1;Name=HJH9161839.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461290.1;locus_tag=O5D79_000264;product=glutathione transferase;protein_id=HJH9161839.1;transl_table=11 DALFDJ020000001.1 tpg gene 291107 291658 . + . ID=gene-O5D79_000265;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=O5D79_000265 DALFDJ020000001.1 Protein Homology CDS 291107 291658 . + 0 ID=cds-HJH9161840.1;Parent=gene-O5D79_000265;Dbxref=NCBI_GP:HJH9161840.1;Name=HJH9161840.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461289.1;locus_tag=O5D79_000265;product=phosphodiesterase;protein_id=HJH9161840.1;transl_table=11 DALFDJ020000001.1 tpg gene 291715 292269 . + . ID=gene-O5D79_000266;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=O5D79_000266 DALFDJ020000001.1 Protein Homology CDS 291715 292269 . + 0 ID=cds-HJH9161841.1;Parent=gene-O5D79_000266;Dbxref=NCBI_GP:HJH9161841.1;Name=HJH9161841.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461288.1;locus_tag=O5D79_000266;product=NUDIX hydrolase YfcD;protein_id=HJH9161841.1;transl_table=11 DALFDJ020000001.1 tpg gene 292275 293294 . - . ID=gene-O5D79_000267;Name=O5D79_000267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000267 DALFDJ020000001.1 Protein Homology CDS 292275 293294 . - 0 ID=cds-HJH9161842.1;Parent=gene-O5D79_000267;Dbxref=NCBI_GP:HJH9161842.1;Name=HJH9161842.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=O5D79_000267;product=LacI family DNA-binding transcriptional regulator;protein_id=HJH9161842.1;transl_table=11 DALFDJ020000001.1 tpg gene 293547 293990 . + . ID=gene-O5D79_000268;Name=O5D79_000268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000268 DALFDJ020000001.1 Protein Homology CDS 293547 293990 . + 0 ID=cds-HJH9161843.1;Parent=gene-O5D79_000268;Dbxref=NCBI_GP:HJH9161843.1;Name=HJH9161843.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461286.1;locus_tag=O5D79_000268;product=PTS sugar transporter subunit IIA;protein_id=HJH9161843.1;transl_table=11 DALFDJ020000001.1 tpg gene 294071 294343 . + . ID=gene-O5D79_000269;Name=O5D79_000269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000269 DALFDJ020000001.1 Protein Homology CDS 294071 294343 . + 0 ID=cds-HJH9161844.1;Parent=gene-O5D79_000269;Dbxref=NCBI_GP:HJH9161844.1;Name=HJH9161844.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461285.1;locus_tag=O5D79_000269;product=PTS sugar transporter subunit IIB;protein_id=HJH9161844.1;transl_table=11 DALFDJ020000001.1 tpg gene 294364 295755 . + . ID=gene-O5D79_000270;Name=O5D79_000270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000270 DALFDJ020000001.1 Protein Homology CDS 294364 295755 . + 0 ID=cds-HJH9161845.1;Parent=gene-O5D79_000270;Dbxref=NCBI_GP:HJH9161845.1;Name=HJH9161845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461284.3;locus_tag=O5D79_000270;product=PTS ascorbate transporter subunit IIC;protein_id=HJH9161845.1;transl_table=11 DALFDJ020000001.1 tpg gene 295752 296582 . + . ID=gene-O5D79_000271;Name=O5D79_000271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000271 DALFDJ020000001.1 Protein Homology CDS 295752 296582 . + 0 ID=cds-HJH9161846.1;Parent=gene-O5D79_000271;Dbxref=NCBI_GP:HJH9161846.1;Name=HJH9161846.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=O5D79_000271;product=transketolase;protein_id=HJH9161846.1;transl_table=11 DALFDJ020000001.1 tpg gene 296575 297528 . + . ID=gene-O5D79_000272;Name=O5D79_000272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000272 DALFDJ020000001.1 Protein Homology CDS 296575 297528 . + 0 ID=cds-HJH9161847.1;Parent=gene-O5D79_000272;Dbxref=NCBI_GP:HJH9161847.1;Name=HJH9161847.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=O5D79_000272;product=transketolase family protein;protein_id=HJH9161847.1;transl_table=11 DALFDJ020000001.1 tpg gene 297577 299097 . - . ID=gene-O5D79_000273;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=O5D79_000273 DALFDJ020000001.1 Protein Homology CDS 297577 299097 . - 0 ID=cds-HJH9161848.1;Parent=gene-O5D79_000273;Dbxref=NCBI_GP:HJH9161848.1;Name=HJH9161848.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461281.1;locus_tag=O5D79_000273;product=putative basic amino acid antiporter YfcC;protein_id=HJH9161848.1;transl_table=11 DALFDJ020000001.1 tpg gene 299315 301459 . - . ID=gene-O5D79_000274;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=O5D79_000274 DALFDJ020000001.1 Protein Homology CDS 299315 301459 . - 0 ID=cds-HJH9161849.1;Parent=gene-O5D79_000274;Dbxref=NCBI_GP:HJH9161849.1;Name=HJH9161849.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461280.1;locus_tag=O5D79_000274;product=phosphate acetyltransferase;protein_id=HJH9161849.1;transl_table=11 DALFDJ020000001.1 tpg gene 301536 302738 . - . ID=gene-O5D79_000275;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=O5D79_000275 DALFDJ020000001.1 Protein Homology CDS 301536 302738 . - 0 ID=cds-HJH9161850.1;Parent=gene-O5D79_000275;Dbxref=NCBI_GP:HJH9161850.1;Name=HJH9161850.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=O5D79_000275;product=acetate kinase;protein_id=HJH9161850.1;transl_table=11 DALFDJ020000001.1 tpg gene 303078 303533 . + . ID=gene-O5D79_000276;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=O5D79_000276 DALFDJ020000001.1 Protein Homology CDS 303078 303533 . + 0 ID=cds-HJH9161851.1;Parent=gene-O5D79_000276;Dbxref=NCBI_GP:HJH9161851.1;Name=HJH9161851.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=O5D79_000276;product=terminus macrodomain insulation protein YfbV;protein_id=HJH9161851.1;transl_table=11 DALFDJ020000001.1 tpg gene 303616 304110 . + . ID=gene-O5D79_000277;Name=O5D79_000277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000277 DALFDJ020000001.1 Protein Homology CDS 303616 304110 . + 0 ID=cds-HJH9161852.1;Parent=gene-O5D79_000277;Dbxref=NCBI_GP:HJH9161852.1;Name=HJH9161852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=O5D79_000277;product=YfbU family protein;protein_id=HJH9161852.1;transl_table=11 DALFDJ020000001.1 tpg gene 304103 304780 . + . ID=gene-O5D79_000278;Name=O5D79_000278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000278 DALFDJ020000001.1 Protein Homology CDS 304103 304780 . + 0 ID=cds-HJH9161853.1;Parent=gene-O5D79_000278;Dbxref=NCBI_GP:HJH9161853.1;Name=HJH9161853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461276.3;locus_tag=O5D79_000278;product=sugar phosphatase;protein_id=HJH9161853.1;transl_table=11 DALFDJ020000001.1 tpg gene 304857 306683 . + . ID=gene-O5D79_000279;Name=O5D79_000279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000279 DALFDJ020000001.1 Protein Homology CDS 304857 306683 . + 0 ID=cds-HJH9161854.1;Parent=gene-O5D79_000279;Dbxref=NCBI_GP:HJH9161854.1;Name=HJH9161854.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=O5D79_000279;product=SLC13 family permease;protein_id=HJH9161854.1;transl_table=11 DALFDJ020000001.1 tpg gene 306774 307373 . - . ID=gene-O5D79_000280;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=O5D79_000280 DALFDJ020000001.1 Protein Homology CDS 306774 307373 . - 0 ID=cds-HJH9161855.1;Parent=gene-O5D79_000280;Dbxref=NCBI_GP:HJH9161855.1;Name=HJH9161855.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461274.1;locus_tag=O5D79_000280;product=5'-deoxynucleotidase;protein_id=HJH9161855.1;transl_table=11 DALFDJ020000001.1 tpg gene 307467 308681 . - . ID=gene-O5D79_000281;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=O5D79_000281 DALFDJ020000001.1 Protein Homology CDS 307467 308681 . - 0 ID=cds-HJH9161856.1;Parent=gene-O5D79_000281;Dbxref=NCBI_GP:HJH9161856.1;Name=HJH9161856.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=O5D79_000281;product=alanine transaminase AlaA;protein_id=HJH9161856.1;transl_table=11 DALFDJ020000001.1 tpg gene 309613 310551 . + . ID=gene-O5D79_000282;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=O5D79_000282 DALFDJ020000001.1 Protein Homology CDS 309613 310551 . + 0 ID=cds-HJH9161857.1;Parent=gene-O5D79_000282;Dbxref=NCBI_GP:HJH9161857.1;Name=HJH9161857.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461272.1;locus_tag=O5D79_000282;product=transcriptional regulator LrhA;protein_id=HJH9161857.1;transl_table=11 DALFDJ020000001.1 tpg gene 310631 310783 . + . ID=gene-O5D79_000283;Name=O5D79_000283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000283 DALFDJ020000001.1 Protein Homology CDS 310631 310783 . + 0 ID=cds-HJH9161858.1;Parent=gene-O5D79_000283;Dbxref=NCBI_GP:HJH9161858.1;Name=HJH9161858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461271.1;locus_tag=O5D79_000283;product=STM2329 family putative cytoplasmic protein;protein_id=HJH9161858.1;transl_table=11 DALFDJ020000001.1 tpg gene 311180 311623 . + . ID=gene-O5D79_000284;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=O5D79_000284 DALFDJ020000001.1 Protein Homology CDS 311180 311623 . + 0 ID=cds-HJH9161859.1;Parent=gene-O5D79_000284;Dbxref=NCBI_GP:HJH9161859.1;Name=HJH9161859.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461270.1;locus_tag=O5D79_000284;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=HJH9161859.1;transl_table=11 DALFDJ020000001.1 tpg gene 311639 312301 . + . ID=gene-O5D79_000285;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=O5D79_000285 DALFDJ020000001.1 Protein Homology CDS 311639 312301 . + 0 ID=cds-HJH9161860.1;Parent=gene-O5D79_000285;Dbxref=NCBI_GP:HJH9161860.1;Name=HJH9161860.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461269.1;locus_tag=O5D79_000285;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=HJH9161860.1;transl_table=11 DALFDJ020000001.1 tpg gene 312388 314190 . + . ID=gene-O5D79_000286;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=O5D79_000286 DALFDJ020000001.1 Protein Homology CDS 312388 314190 . + 0 ID=cds-HJH9161861.1;Parent=gene-O5D79_000286;Dbxref=NCBI_GP:HJH9161861.1;Name=HJH9161861.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461268.1;locus_tag=O5D79_000286;product=NADH-quinone oxidoreductase subunit C/D;protein_id=HJH9161861.1;transl_table=11 DALFDJ020000001.1 tpg gene 314193 314693 . + . ID=gene-O5D79_000287;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=O5D79_000287 DALFDJ020000001.1 Protein Homology CDS 314193 314693 . + 0 ID=cds-HJH9161862.1;Parent=gene-O5D79_000287;Dbxref=NCBI_GP:HJH9161862.1;Name=HJH9161862.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461267.1;locus_tag=O5D79_000287;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=HJH9161862.1;transl_table=11 DALFDJ020000001.1 tpg gene 314690 316027 . + . ID=gene-O5D79_000288;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=O5D79_000288 DALFDJ020000001.1 Protein Homology CDS 314690 316027 . + 0 ID=cds-HJH9161863.1;Parent=gene-O5D79_000288;Dbxref=NCBI_GP:HJH9161863.1;Name=HJH9161863.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461266.1;locus_tag=O5D79_000288;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=HJH9161863.1;transl_table=11 DALFDJ020000001.1 tpg gene 316108 318834 . + . ID=gene-O5D79_000289;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=O5D79_000289 DALFDJ020000001.1 Protein Homology CDS 316108 318834 . + 0 ID=cds-HJH9161864.1;Parent=gene-O5D79_000289;Dbxref=NCBI_GP:HJH9161864.1;Name=HJH9161864.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=O5D79_000289;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=HJH9161864.1;transl_table=11 DALFDJ020000001.1 tpg gene 318831 319808 . + . ID=gene-O5D79_000290;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=O5D79_000290 DALFDJ020000001.1 Protein Homology CDS 318831 319808 . + 0 ID=cds-HJH9161865.1;Parent=gene-O5D79_000290;Dbxref=NCBI_GP:HJH9161865.1;Name=HJH9161865.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=O5D79_000290;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=HJH9161865.1;transl_table=11 DALFDJ020000001.1 tpg gene 319823 320365 . + . ID=gene-O5D79_000291;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=O5D79_000291 DALFDJ020000001.1 Protein Homology CDS 319823 320365 . + 0 ID=cds-HJH9161866.1;Parent=gene-O5D79_000291;Dbxref=NCBI_GP:HJH9161866.1;Name=HJH9161866.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=O5D79_000291;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=HJH9161866.1;transl_table=11 DALFDJ020000001.1 tpg gene 320376 320930 . + . ID=gene-O5D79_000292;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=O5D79_000292 DALFDJ020000001.1 Protein Homology CDS 320376 320930 . + 0 ID=cds-HJH9161867.1;Parent=gene-O5D79_000292;Dbxref=NCBI_GP:HJH9161867.1;Name=HJH9161867.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461262.1;locus_tag=O5D79_000292;product=NADH-quinone oxidoreductase subunit J;protein_id=HJH9161867.1;transl_table=11 DALFDJ020000001.1 tpg gene 320927 321229 . + . ID=gene-O5D79_000293;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=O5D79_000293 DALFDJ020000001.1 Protein Homology CDS 320927 321229 . + 0 ID=cds-HJH9161868.1;Parent=gene-O5D79_000293;Dbxref=NCBI_GP:HJH9161868.1;Name=HJH9161868.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=O5D79_000293;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=HJH9161868.1;transl_table=11 DALFDJ020000001.1 tpg gene 321226 323067 . + . ID=gene-O5D79_000294;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=O5D79_000294 DALFDJ020000001.1 Protein Homology CDS 321226 323067 . + 0 ID=cds-HJH9161869.1;Parent=gene-O5D79_000294;Dbxref=NCBI_GP:HJH9161869.1;Name=HJH9161869.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=O5D79_000294;product=NADH-quinone oxidoreductase subunit L;protein_id=HJH9161869.1;transl_table=11 DALFDJ020000001.1 tpg gene 323381 324910 . + . ID=gene-O5D79_000295;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=O5D79_000295 DALFDJ020000001.1 Protein Homology CDS 323381 324910 . + 0 ID=cds-HJH9161870.1;Parent=gene-O5D79_000295;Dbxref=NCBI_GP:HJH9161870.1;Name=HJH9161870.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=O5D79_000295;product=NADH-quinone oxidoreductase subunit M;protein_id=HJH9161870.1;transl_table=11 DALFDJ020000001.1 tpg gene 324917 326374 . + . ID=gene-O5D79_000296;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=O5D79_000296 DALFDJ020000001.1 Protein Homology CDS 324917 326374 . + 0 ID=cds-HJH9161871.1;Parent=gene-O5D79_000296;Dbxref=NCBI_GP:HJH9161871.1;Name=HJH9161871.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=O5D79_000296;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=HJH9161871.1;transl_table=11 DALFDJ020000001.1 tpg gene 326983 333075 . + . ID=gene-O5D79_000297;Name=O5D79_000297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000297 DALFDJ020000001.1 Protein Homology CDS 326983 333075 . + 0 ID=cds-HJH9161872.1;Parent=gene-O5D79_000297;Dbxref=NCBI_GP:HJH9161872.1;Name=HJH9161872.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044774.1;locus_tag=O5D79_000297;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=HJH9161872.1;transl_table=11 DALFDJ020000001.1 tpg gene 333778 335568 . + . ID=gene-O5D79_000298;Name=O5D79_000298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000298 DALFDJ020000001.1 Protein Homology CDS 333778 335568 . + 0 ID=cds-HJH9161873.1;Parent=gene-O5D79_000298;Dbxref=NCBI_GP:HJH9161873.1;Name=HJH9161873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461257.1;locus_tag=O5D79_000298;product=vWA domain-containing protein;protein_id=HJH9161873.1;transl_table=11 DALFDJ020000001.1 tpg gene 335609 336610 . - . ID=gene-O5D79_000299;Name=O5D79_000299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000299 DALFDJ020000001.1 Protein Homology CDS 335609 336610 . - 0 ID=cds-HJH9161874.1;Parent=gene-O5D79_000299;Dbxref=NCBI_GP:HJH9161874.1;Name=HJH9161874.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461256.1;locus_tag=O5D79_000299;product=chemotaxis protein;protein_id=HJH9161874.1;transl_table=11 DALFDJ020000001.1 tpg gene 336676 337593 . - . ID=gene-O5D79_000300;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=O5D79_000300 DALFDJ020000001.1 Protein Homology CDS 336676 337593 . - 0 ID=cds-HJH9161875.1;Parent=gene-O5D79_000300;Dbxref=NCBI_GP:HJH9161875.1;Name=HJH9161875.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461255.1;locus_tag=O5D79_000300;product=ribonuclease BN;protein_id=HJH9161875.1;transl_table=11 DALFDJ020000001.1 tpg gene 337654 338115 . + . ID=gene-O5D79_000301;Name=O5D79_000301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000301 DALFDJ020000001.1 Protein Homology CDS 337654 338115 . + 0 ID=cds-HJH9161876.1;Parent=gene-O5D79_000301;Dbxref=NCBI_GP:HJH9161876.1;Name=HJH9161876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461254.1;locus_tag=O5D79_000301;product=GNAT family N-acetyltransferase;protein_id=HJH9161876.1;transl_table=11 DALFDJ020000001.1 tpg gene 338170 338475 . + . ID=gene-O5D79_000302;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=O5D79_000302 DALFDJ020000001.1 Protein Homology CDS 338170 338475 . + 0 ID=cds-HJH9161877.1;Parent=gene-O5D79_000302;Dbxref=NCBI_GP:HJH9161877.1;Name=HJH9161877.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=O5D79_000302;product=stress response protein ElaB;protein_id=HJH9161877.1;transl_table=11 DALFDJ020000001.1 tpg gene 338576 339871 . + . ID=gene-O5D79_000303;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=O5D79_000303 DALFDJ020000001.1 Protein Homology CDS 338576 339871 . + 0 ID=cds-HJH9161878.1;Parent=gene-O5D79_000303;Dbxref=NCBI_GP:HJH9161878.1;Name=HJH9161878.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461252.1;locus_tag=O5D79_000303;product=isochorismate synthase MenF;protein_id=HJH9161878.1;transl_table=11 DALFDJ020000001.1 tpg gene 339957 341627 . + . ID=gene-O5D79_000304;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=O5D79_000304 DALFDJ020000001.1 Protein Homology CDS 339957 341627 . + 0 ID=cds-HJH9161879.1;Parent=gene-O5D79_000304;Dbxref=NCBI_GP:HJH9161879.1;Name=HJH9161879.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461251.1;locus_tag=O5D79_000304;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=HJH9161879.1;transl_table=11 DALFDJ020000001.1 tpg gene 341624 342382 . + . ID=gene-O5D79_000305;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=O5D79_000305 DALFDJ020000001.1 Protein Homology CDS 341624 342382 . + 0 ID=cds-HJH9161880.1;Parent=gene-O5D79_000305;Dbxref=NCBI_GP:HJH9161880.1;Name=HJH9161880.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461250.1;locus_tag=O5D79_000305;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=HJH9161880.1;transl_table=11 DALFDJ020000001.1 tpg gene 342397 343254 . + . ID=gene-O5D79_000306;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=O5D79_000306 DALFDJ020000001.1 Protein Homology CDS 342397 343254 . + 0 ID=cds-HJH9161881.1;Parent=gene-O5D79_000306;Dbxref=NCBI_GP:HJH9161881.1;Name=HJH9161881.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=O5D79_000306;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=HJH9161881.1;transl_table=11 DALFDJ020000001.1 tpg gene 343254 344216 . + . ID=gene-O5D79_000307;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=O5D79_000307 DALFDJ020000001.1 Protein Homology CDS 343254 344216 . + 0 ID=cds-HJH9161882.1;Parent=gene-O5D79_000307;Dbxref=NCBI_GP:HJH9161882.1;Name=HJH9161882.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461248.1;locus_tag=O5D79_000307;product=o-succinylbenzoate synthase;protein_id=HJH9161882.1;transl_table=11 DALFDJ020000001.1 tpg gene 344213 345580 . + . ID=gene-O5D79_000308;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=O5D79_000308 DALFDJ020000001.1 Protein Homology CDS 344213 345580 . + 0 ID=cds-HJH9161883.1;Parent=gene-O5D79_000308;Dbxref=NCBI_GP:HJH9161883.1;Name=HJH9161883.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461247.1;locus_tag=O5D79_000308;product=o-succinylbenzoate--CoA ligase;protein_id=HJH9161883.1;transl_table=11 DALFDJ020000001.1 tpg gene 345678 345935 . + . ID=gene-O5D79_000309;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=O5D79_000309 DALFDJ020000001.1 Protein Homology CDS 345678 345935 . + 0 ID=cds-HJH9161884.1;Parent=gene-O5D79_000309;Dbxref=NCBI_GP:HJH9161884.1;Name=HJH9161884.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461246.1;locus_tag=O5D79_000309;product=signal transduction protein PmrD;protein_id=HJH9161884.1;transl_table=11 DALFDJ020000001.1 tpg gene 345930 346307 . - . ID=gene-O5D79_000310;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=O5D79_000310 DALFDJ020000001.1 Protein Homology CDS 345930 346307 . - 0 ID=cds-HJH9161885.1;Parent=gene-O5D79_000310;Dbxref=NCBI_GP:HJH9161885.1;Name=HJH9161885.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461245.1;locus_tag=O5D79_000310;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=HJH9161885.1;transl_table=11 DALFDJ020000001.1 tpg gene 346307 346642 . - . ID=gene-O5D79_000311;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=O5D79_000311 DALFDJ020000001.1 Protein Homology CDS 346307 346642 . - 0 ID=cds-HJH9161886.1;Parent=gene-O5D79_000311;Dbxref=NCBI_GP:HJH9161886.1;Name=HJH9161886.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461244.1;locus_tag=O5D79_000311;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=HJH9161886.1;transl_table=11 DALFDJ020000001.1 tpg gene 346639 348285 . - . ID=gene-O5D79_000312;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=O5D79_000312 DALFDJ020000001.1 Protein Homology CDS 346639 348285 . - 0 ID=cds-HJH9161887.1;Parent=gene-O5D79_000312;Dbxref=NCBI_GP:HJH9161887.1;Name=HJH9161887.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461243.1;locus_tag=O5D79_000312;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=HJH9161887.1;transl_table=11 DALFDJ020000001.1 tpg gene 348282 349181 . - . ID=gene-O5D79_000313;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=O5D79_000313 DALFDJ020000001.1 Protein Homology CDS 348282 349181 . - 0 ID=cds-HJH9161888.1;Parent=gene-O5D79_000313;Dbxref=NCBI_GP:HJH9161888.1;Name=HJH9161888.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461242.1;locus_tag=O5D79_000313;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=HJH9161888.1;transl_table=11 DALFDJ020000001.1 tpg gene 349178 351160 . - . ID=gene-O5D79_000314;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=O5D79_000314 DALFDJ020000001.1 Protein Homology CDS 349178 351160 . - 0 ID=cds-HJH9161889.1;Parent=gene-O5D79_000314;Dbxref=NCBI_GP:HJH9161889.1;Name=HJH9161889.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461241.1;locus_tag=O5D79_000314;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=HJH9161889.1;transl_table=11 DALFDJ020000001.1 tpg gene 351157 352140 . - . ID=gene-O5D79_000315;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=O5D79_000315 DALFDJ020000001.1 Protein Homology CDS 351157 352140 . - 0 ID=cds-HJH9161890.1;Parent=gene-O5D79_000315;Dbxref=NCBI_GP:HJH9161890.1;Name=HJH9161890.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461240.1;locus_tag=O5D79_000315;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=HJH9161890.1;transl_table=11 DALFDJ020000001.1 tpg gene 352143 353282 . - . ID=gene-O5D79_000316;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=O5D79_000316 DALFDJ020000001.1 Protein Homology CDS 352143 353282 . - 0 ID=cds-HJH9161891.1;Parent=gene-O5D79_000316;Dbxref=NCBI_GP:HJH9161891.1;Name=HJH9161891.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=O5D79_000316;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=HJH9161891.1;transl_table=11 DALFDJ020000001.1 tpg gene 353581 354186 . + . ID=gene-O5D79_000317;Name=pmrG;gbkey=Gene;gene=pmrG;gene_biotype=protein_coding;locus_tag=O5D79_000317 DALFDJ020000001.1 Protein Homology CDS 353581 354186 . + 0 ID=cds-HJH9161892.1;Parent=gene-O5D79_000317;Dbxref=NCBI_GP:HJH9161892.1;Name=HJH9161892.1;gbkey=CDS;gene=pmrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461238.1;locus_tag=O5D79_000317;product=lipopolysaccharide core heptose(II)-phosphate phosphatase PmrG;protein_id=HJH9161892.1;transl_table=11 DALFDJ020000001.1 tpg gene 354231 354656 . - . ID=gene-O5D79_000318;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=O5D79_000318 DALFDJ020000001.1 Protein Homology CDS 354231 354656 . - 0 ID=cds-HJH9161893.1;Parent=gene-O5D79_000318;Dbxref=NCBI_GP:HJH9161893.1;Name=HJH9161893.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461237.1;locus_tag=O5D79_000318;product=nucleoside triphosphatase NudI;protein_id=HJH9161893.1;transl_table=11 DALFDJ020000001.1 tpg gene 354935 355477 . + . ID=gene-O5D79_000319;Name=O5D79_000319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000319 DALFDJ020000001.1 Protein Homology CDS 354935 355477 . + 0 ID=cds-HJH9161894.1;Parent=gene-O5D79_000319;Dbxref=NCBI_GP:HJH9161894.1;Name=HJH9161894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311165.2;locus_tag=O5D79_000319;product=YfaZ family protein;protein_id=HJH9161894.1;transl_table=11 DALFDJ020000001.1 tpg gene 355593 356789 . + . ID=gene-O5D79_000320;Name=O5D79_000320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000320 DALFDJ020000001.1 Protein Homology CDS 355593 356789 . + 0 ID=cds-HJH9161895.1;Parent=gene-O5D79_000320;Dbxref=NCBI_GP:HJH9161895.1;Name=HJH9161895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461235.1;locus_tag=O5D79_000320;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=HJH9161895.1;transl_table=11 DALFDJ020000001.1 tpg gene 356899 357921 . - . ID=gene-O5D79_000321;Name=sseL;gbkey=Gene;gene=sseL;gene_biotype=protein_coding;locus_tag=O5D79_000321 DALFDJ020000001.1 Protein Homology CDS 356899 357921 . - 0 ID=cds-HJH9161896.1;Parent=gene-O5D79_000321;Dbxref=NCBI_GP:HJH9161896.1;Name=HJH9161896.1;gbkey=CDS;gene=sseL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017745.1;locus_tag=O5D79_000321;product=SPI-2 type III secretion system effector deubiquitinase SseL;protein_id=HJH9161896.1;transl_table=11 DALFDJ020000001.1 tpg gene 358294 359484 . - . ID=gene-O5D79_000322;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=O5D79_000322 DALFDJ020000001.1 Protein Homology CDS 358294 359484 . - 0 ID=cds-HJH9161897.1;Parent=gene-O5D79_000322;Dbxref=NCBI_GP:HJH9161897.1;Name=HJH9161897.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461228.1;locus_tag=O5D79_000322;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=HJH9161897.1;transl_table=11 DALFDJ020000001.1 tpg gene 359481 360740 . - . ID=gene-O5D79_000323;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=O5D79_000323 DALFDJ020000001.1 Protein Homology CDS 359481 360740 . - 0 ID=cds-HJH9161898.1;Parent=gene-O5D79_000323;Dbxref=NCBI_GP:HJH9161898.1;Name=HJH9161898.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461227.1;locus_tag=O5D79_000323;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=HJH9161898.1;transl_table=11 DALFDJ020000001.1 tpg gene 360730 362358 . - . ID=gene-O5D79_000324;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=O5D79_000324 DALFDJ020000001.1 Protein Homology CDS 360730 362358 . - 0 ID=cds-HJH9161899.1;Parent=gene-O5D79_000324;Dbxref=NCBI_GP:HJH9161899.1;Name=HJH9161899.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461226.1;locus_tag=O5D79_000324;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=HJH9161899.1;transl_table=11 DALFDJ020000001.1 tpg gene 362631 363989 . + . ID=gene-O5D79_000325;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=O5D79_000325 DALFDJ020000001.1 Protein Homology CDS 362631 363989 . + 0 ID=cds-HJH9161900.1;Parent=gene-O5D79_000325;Dbxref=NCBI_GP:HJH9161900.1;Name=HJH9161900.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461225.1;locus_tag=O5D79_000325;product=glycerol-3-phosphate transporter;protein_id=HJH9161900.1;transl_table=11 DALFDJ020000001.1 tpg gene 363994 365064 . + . ID=gene-O5D79_000326;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=O5D79_000326 DALFDJ020000001.1 Protein Homology CDS 363994 365064 . + 0 ID=cds-HJH9161901.1;Parent=gene-O5D79_000326;Dbxref=NCBI_GP:HJH9161901.1;Name=HJH9161901.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461224.1;locus_tag=O5D79_000326;product=glycerophosphodiester phosphodiesterase;protein_id=HJH9161901.1;transl_table=11 DALFDJ020000001.1 tpg gene 365180 366058 . - . ID=gene-O5D79_000327;Name=O5D79_000327;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000327 DALFDJ020000001.1 Protein Homology CDS 365180 366058 . - 0 ID=cds-HJH9161902.1;Parent=gene-O5D79_000327;Dbxref=NCBI_GP:HJH9161902.1;Name=HJH9161902.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=O5D79_000327;product=LysR family transcriptional regulator;protein_id=HJH9161902.1;transl_table=11 DALFDJ020000001.1 tpg gene 366220 367410 . + . ID=gene-O5D79_000328;Name=O5D79_000328;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000328 DALFDJ020000001.1 Protein Homology CDS 366220 367410 . + 0 ID=cds-HJH9161903.1;Parent=gene-O5D79_000328;Dbxref=NCBI_GP:HJH9161903.1;Name=HJH9161903.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461222.1;locus_tag=O5D79_000328;product=MFS transporter;protein_id=HJH9161903.1;transl_table=11 DALFDJ020000001.1 tpg gene 367412 367666 . - . ID=gene-O5D79_000329;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=O5D79_000329 DALFDJ020000001.1 Protein Homology CDS 367412 367666 . - 0 ID=cds-HJH9161904.1;Parent=gene-O5D79_000329;Dbxref=NCBI_GP:HJH9161904.1;Name=HJH9161904.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461221.1;locus_tag=O5D79_000329;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=HJH9161904.1;transl_table=11 DALFDJ020000001.1 tpg gene 367666 368796 . - . ID=gene-O5D79_000330;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=O5D79_000330 DALFDJ020000001.1 Protein Homology CDS 367666 368796 . - 0 ID=cds-HJH9161905.1;Parent=gene-O5D79_000330;Dbxref=NCBI_GP:HJH9161905.1;Name=HJH9161905.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=O5D79_000330;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=HJH9161905.1;transl_table=11 DALFDJ020000001.1 tpg gene 368909 371194 . - . ID=gene-O5D79_000331;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=O5D79_000331 DALFDJ020000001.1 Protein Homology CDS 368909 371194 . - 0 ID=cds-HJH9161906.1;Parent=gene-O5D79_000331;Dbxref=NCBI_GP:HJH9161906.1;Name=HJH9161906.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=O5D79_000331;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=HJH9161906.1;transl_table=11 DALFDJ020000001.1 tpg gene 371550 372278 . - . ID=gene-O5D79_000332;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=O5D79_000332 DALFDJ020000001.1 Protein Homology CDS 371550 372278 . - 0 ID=cds-HJH9161907.1;Parent=gene-O5D79_000332;Dbxref=NCBI_GP:HJH9161907.1;Name=HJH9161907.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461218.1;locus_tag=O5D79_000332;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=HJH9161907.1;transl_table=11 DALFDJ020000001.1 tpg pseudogene 372361 373244 . - . ID=gene-O5D79_000333;Name=O5D79_000333;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_000333;pseudo=true DALFDJ020000001.1 Protein Homology CDS 372361 373244 . - 0 ID=cds-O5D79_000333;Parent=gene-O5D79_000333;Note=frameshifted;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461217.3;locus_tag=O5D79_000333;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 DALFDJ020000001.1 tpg gene 373294 374619 . + . ID=gene-O5D79_000334;Name=O5D79_000334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000334 DALFDJ020000001.1 Protein Homology CDS 373294 374619 . + 0 ID=cds-HJH9161908.1;Parent=gene-O5D79_000334;Dbxref=NCBI_GP:HJH9161908.1;Name=HJH9161908.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461216.1;locus_tag=O5D79_000334;product=MFS transporter;protein_id=HJH9161908.1;transl_table=11 DALFDJ020000001.1 tpg gene 374634 375836 . + . ID=gene-O5D79_000335;Name=O5D79_000335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000335 DALFDJ020000001.1 Protein Homology CDS 374634 375836 . + 0 ID=cds-HJH9161909.1;Parent=gene-O5D79_000335;Dbxref=NCBI_GP:HJH9161909.1;Name=HJH9161909.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461215.1;locus_tag=O5D79_000335;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=HJH9161909.1;transl_table=11 DALFDJ020000001.1 tpg gene 376246 378882 . + . ID=gene-O5D79_000336;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=O5D79_000336 DALFDJ020000001.1 Protein Homology CDS 376246 378882 . + 0 ID=cds-HJH9161910.1;Parent=gene-O5D79_000336;Dbxref=NCBI_GP:HJH9161910.1;Name=HJH9161910.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=O5D79_000336;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=HJH9161910.1;transl_table=11 DALFDJ020000001.1 tpg gene 379000 381846 . + . ID=gene-O5D79_000337;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=O5D79_000337 DALFDJ020000001.1 Protein Homology CDS 379000 381846 . + 0 ID=cds-HJH9161911.1;Parent=gene-O5D79_000337;Dbxref=NCBI_GP:HJH9161911.1;Name=HJH9161911.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461213.1;locus_tag=O5D79_000337;product=two-component system sensor histidine kinase RcsC;protein_id=HJH9161911.1;transl_table=11 DALFDJ020000001.1 tpg gene 381949 382599 . - . ID=gene-O5D79_000338;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=O5D79_000338 DALFDJ020000001.1 Protein Homology CDS 381949 382599 . - 0 ID=cds-HJH9161912.1;Parent=gene-O5D79_000338;Dbxref=NCBI_GP:HJH9161912.1;Name=HJH9161912.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461212.1;locus_tag=O5D79_000338;product=response regulator transcription factor RcsB;protein_id=HJH9161912.1;transl_table=11 DALFDJ020000001.1 tpg gene 382616 385285 . - . ID=gene-O5D79_000339;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=O5D79_000339 DALFDJ020000001.1 Protein Homology CDS 382616 385285 . - 0 ID=cds-HJH9161913.1;Parent=gene-O5D79_000339;Dbxref=NCBI_GP:HJH9161913.1;Name=HJH9161913.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=O5D79_000339;product=phosphotransferase RcsD;protein_id=HJH9161913.1;transl_table=11 DALFDJ020000001.1 tpg gene 386014 387150 . + . ID=gene-O5D79_000340;Name=O5D79_000340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000340 DALFDJ020000001.1 Protein Homology CDS 386014 387150 . + 0 ID=cds-HJH9161914.1;Parent=gene-O5D79_000340;Dbxref=NCBI_GP:HJH9161914.1;Name=HJH9161914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461210.1;locus_tag=O5D79_000340;product=porin OmpC;protein_id=HJH9161914.1;transl_table=11 DALFDJ020000001.1 tpg gene 387265 388317 . + . ID=gene-O5D79_000341;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=O5D79_000341 DALFDJ020000001.1 Protein Homology CDS 387265 388317 . + 0 ID=cds-HJH9161915.1;Parent=gene-O5D79_000341;Dbxref=NCBI_GP:HJH9161915.1;Name=HJH9161915.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461209.1;locus_tag=O5D79_000341;product=FAD:protein FMN transferase ApbE;protein_id=HJH9161915.1;transl_table=11 DALFDJ020000001.1 tpg gene 388398 389459 . + . ID=gene-O5D79_000342;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=O5D79_000342 DALFDJ020000001.1 Protein Homology CDS 388398 389459 . + 0 ID=cds-HJH9161916.1;Parent=gene-O5D79_000342;Dbxref=NCBI_GP:HJH9161916.1;Name=HJH9161916.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461208.1;locus_tag=O5D79_000342;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=HJH9161916.1;transl_table=11 DALFDJ020000001.1 tpg gene 389462 390112 . + . ID=gene-O5D79_000343;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=O5D79_000343 DALFDJ020000001.1 Protein Homology CDS 389462 390112 . + 0 ID=cds-HJH9161917.1;Parent=gene-O5D79_000343;Dbxref=NCBI_GP:HJH9161917.1;Name=HJH9161917.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461207.1;locus_tag=O5D79_000343;product=DNA oxidative demethylase AlkB;protein_id=HJH9161917.1;transl_table=11 DALFDJ020000001.1 tpg gene 390188 391831 . + . ID=gene-O5D79_000344;Name=O5D79_000344;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000344 DALFDJ020000001.1 Protein Homology CDS 390188 391831 . + 0 ID=cds-HJH9161918.1;Parent=gene-O5D79_000344;Dbxref=NCBI_GP:HJH9161918.1;Name=HJH9161918.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461206.1;locus_tag=O5D79_000344;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=HJH9161918.1;transl_table=11 DALFDJ020000001.1 tpg gene 392023 392517 . - . ID=gene-O5D79_000345;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=O5D79_000345 DALFDJ020000001.1 Protein Homology CDS 392023 392517 . - 0 ID=cds-HJH9161919.1;Parent=gene-O5D79_000345;Dbxref=NCBI_GP:HJH9161919.1;Name=HJH9161919.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461205.1;locus_tag=O5D79_000345;product=serine protease inhibitor ecotin;protein_id=HJH9161919.1;transl_table=11 DALFDJ020000001.1 tpg gene 392931 393422 . + . ID=gene-O5D79_000346;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=O5D79_000346 DALFDJ020000001.1 Protein Homology CDS 392931 393422 . + 0 ID=cds-HJH9161920.1;Parent=gene-O5D79_000346;Dbxref=NCBI_GP:HJH9161920.1;Name=HJH9161920.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461204.1;locus_tag=O5D79_000346;product=ferredoxin-type protein NapF;protein_id=HJH9161920.1;transl_table=11 DALFDJ020000001.1 tpg gene 393412 393675 . + . ID=gene-O5D79_000347;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=O5D79_000347 DALFDJ020000001.1 Protein Homology CDS 393412 393675 . + 0 ID=cds-HJH9161921.1;Parent=gene-O5D79_000347;Dbxref=NCBI_GP:HJH9161921.1;Name=HJH9161921.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461203.1;locus_tag=O5D79_000347;product=chaperone NapD;protein_id=HJH9161921.1;transl_table=11 DALFDJ020000001.1 tpg gene 393672 396158 . + . ID=gene-O5D79_000348;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=O5D79_000348 DALFDJ020000001.1 Protein Homology CDS 393672 396158 . + 0 ID=cds-HJH9161922.1;Parent=gene-O5D79_000348;Dbxref=NCBI_GP:HJH9161922.1;Name=HJH9161922.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461202.1;locus_tag=O5D79_000348;product=nitrate reductase catalytic subunit NapA;protein_id=HJH9161922.1;transl_table=11 DALFDJ020000001.1 tpg gene 396165 396860 . + . ID=gene-O5D79_000349;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=O5D79_000349 DALFDJ020000001.1 Protein Homology CDS 396165 396860 . + 0 ID=cds-HJH9161923.1;Parent=gene-O5D79_000349;Dbxref=NCBI_GP:HJH9161923.1;Name=HJH9161923.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461201.1;locus_tag=O5D79_000349;product=ferredoxin-type protein NapG;protein_id=HJH9161923.1;transl_table=11 DALFDJ020000001.1 tpg gene 396847 397716 . + . ID=gene-O5D79_000350;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=O5D79_000350 DALFDJ020000001.1 Protein Homology CDS 396847 397716 . + 0 ID=cds-HJH9161924.1;Parent=gene-O5D79_000350;Dbxref=NCBI_GP:HJH9161924.1;Name=HJH9161924.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461200.1;locus_tag=O5D79_000350;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=HJH9161924.1;transl_table=11 DALFDJ020000001.1 tpg gene 397832 398281 . + . ID=gene-O5D79_000351;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=O5D79_000351 DALFDJ020000001.1 Protein Homology CDS 397832 398281 . + 0 ID=cds-HJH9161925.1;Parent=gene-O5D79_000351;Dbxref=NCBI_GP:HJH9161925.1;Name=HJH9161925.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461199.1;locus_tag=O5D79_000351;product=nitrate reductase cytochrome c-type subunit;protein_id=HJH9161925.1;transl_table=11 DALFDJ020000001.1 tpg gene 398291 398893 . + . ID=gene-O5D79_000352;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=O5D79_000352 DALFDJ020000001.1 Protein Homology CDS 398291 398893 . + 0 ID=cds-HJH9161926.1;Parent=gene-O5D79_000352;Dbxref=NCBI_GP:HJH9161926.1;Name=HJH9161926.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461198.1;locus_tag=O5D79_000352;product=cytochrome c-type protein NapC;protein_id=HJH9161926.1;transl_table=11 DALFDJ020000001.1 tpg gene 398914 399531 . + . ID=gene-O5D79_000353;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=O5D79_000353 DALFDJ020000001.1 Protein Homology CDS 398914 399531 . + 0 ID=cds-HJH9161927.1;Parent=gene-O5D79_000353;Dbxref=NCBI_GP:HJH9161927.1;Name=HJH9161927.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=O5D79_000353;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=HJH9161927.1;transl_table=11 DALFDJ020000001.1 tpg gene 399528 400187 . + . ID=gene-O5D79_000354;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=O5D79_000354 DALFDJ020000001.1 Protein Homology CDS 399528 400187 . + 0 ID=cds-HJH9161928.1;Parent=gene-O5D79_000354;Dbxref=NCBI_GP:HJH9161928.1;Name=HJH9161928.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=O5D79_000354;product=heme exporter protein CcmB;protein_id=HJH9161928.1;transl_table=11 DALFDJ020000001.1 tpg gene 400239 400438 . + . ID=gene-O5D79_000355;Name=O5D79_000355;end_range=400438,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000355;partial=true DALFDJ020000001.1 Protein Homology CDS 400239 400438 . + 0 ID=cds-HJH9161929.1;Parent=gene-O5D79_000355;Dbxref=NCBI_GP:HJH9161929.1;Name=HJH9161929.1;end_range=400438,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=O5D79_000355;partial=true;product=cytochrome c biogenesis protein;protein_id=HJH9161929.1;transl_table=11 ##sequence-region DALFDJ020000002.1 1 303342 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000002.1 tpg region 1 303342 . + . ID=DALFDJ020000002.1:1..303342;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000002.1 tpg gene 312 743 . + . ID=gene-O5D79_000356;Name=O5D79_000356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000356 DALFDJ020000002.1 Protein Homology CDS 312 743 . + 0 ID=cds-HJH9161930.1;Parent=gene-O5D79_000356;Dbxref=NCBI_GP:HJH9161930.1;Name=HJH9161930.1;Ontology_term=GO:0006972,GO:0006979,GO:0033194,GO:0004601,GO:0051920,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=peroxidase activity|0004601||IEA,peroxiredoxin activity|0051920||IEA;go_process=hyperosmotic response|0006972||IEA,response to oxidative stress|0006979||IEA,response to hydroperoxide|0033194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460522.1;locus_tag=O5D79_000356;product=OsmC family protein;protein_id=HJH9161930.1;transl_table=11 DALFDJ020000002.1 tpg gene 1093 1422 . + . ID=gene-O5D79_000357;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=O5D79_000357 DALFDJ020000002.1 Protein Homology CDS 1093 1422 . + 0 ID=cds-HJH9161931.1;Parent=gene-O5D79_000357;Dbxref=NCBI_GP:HJH9161931.1;Name=HJH9161931.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460521.1;locus_tag=O5D79_000357;product=acid-activated periplasmic chaperone HdeB;protein_id=HJH9161931.1;transl_table=11 DALFDJ020000002.1 tpg gene 1565 2350 . + . ID=gene-O5D79_000358;Name=O5D79_000358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000358 DALFDJ020000002.1 Protein Homology CDS 1565 2350 . + 0 ID=cds-HJH9161932.1;Parent=gene-O5D79_000358;Dbxref=NCBI_GP:HJH9161932.1;Name=HJH9161932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460520.1;locus_tag=O5D79_000358;product=OBAP family protein;protein_id=HJH9161932.1;transl_table=11 DALFDJ020000002.1 tpg gene 2479 4263 . + . ID=gene-O5D79_000359;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=O5D79_000359 DALFDJ020000002.1 Protein Homology CDS 2479 4263 . + 0 ID=cds-HJH9161933.1;Parent=gene-O5D79_000359;Dbxref=NCBI_GP:HJH9161933.1;Name=HJH9161933.1;Ontology_term=GO:0005992,GO:0033942;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460519.1;locus_tag=O5D79_000359;product=malto-oligosyltrehalose trehalohydrolase;protein_id=HJH9161933.1;transl_table=11 DALFDJ020000002.1 tpg pseudogene 4260 6784 . + . ID=gene-O5D79_000360;Name=treY;gbkey=Gene;gene=treY;gene_biotype=pseudogene;locus_tag=O5D79_000360;pseudo=true DALFDJ020000002.1 Protein Homology CDS 4260 6784 . + 0 ID=cds-O5D79_000360;Parent=gene-O5D79_000360;Note=frameshifted;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460518.1;locus_tag=O5D79_000360;product=malto-oligosyltrehalose synthase;pseudo=true;transl_table=11 DALFDJ020000002.1 tpg gene 6841 8916 . + . ID=gene-O5D79_000361;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=O5D79_000361 DALFDJ020000002.1 Protein Homology CDS 6841 8916 . + 0 ID=cds-HJH9161934.1;Parent=gene-O5D79_000361;Dbxref=NCBI_GP:HJH9161934.1;Name=HJH9161934.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460517.1;locus_tag=O5D79_000361;product=glycogen debranching protein GlgX;protein_id=HJH9161934.1;transl_table=11 DALFDJ020000002.1 tpg gene 9030 10232 . - . ID=gene-O5D79_000362;Name=O5D79_000362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000362 DALFDJ020000002.1 Protein Homology CDS 9030 10232 . - 0 ID=cds-HJH9161935.1;Parent=gene-O5D79_000362;Dbxref=NCBI_GP:HJH9161935.1;Name=HJH9161935.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460516.1;locus_tag=O5D79_000362;product=MalY/PatB family protein;protein_id=HJH9161935.1;transl_table=11 DALFDJ020000002.1 tpg gene 10245 11696 . - . ID=gene-O5D79_000363;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=O5D79_000363 DALFDJ020000002.1 Protein Homology CDS 10245 11696 . - 0 ID=cds-HJH9161936.1;Parent=gene-O5D79_000363;Dbxref=NCBI_GP:HJH9161936.1;Name=HJH9161936.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460515.1;locus_tag=O5D79_000363;product=Na+/H+ antiporter NhaC;protein_id=HJH9161936.1;transl_table=11 DALFDJ020000002.1 tpg gene 11840 12847 . - . ID=gene-O5D79_000364;Name=O5D79_000364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000364 DALFDJ020000002.1 Protein Homology CDS 11840 12847 . - 0 ID=cds-HJH9161937.1;Parent=gene-O5D79_000364;Dbxref=NCBI_GP:HJH9161937.1;Name=HJH9161937.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460514.1;locus_tag=O5D79_000364;product=LacI family DNA-binding transcriptional regulator;protein_id=HJH9161937.1;transl_table=11 DALFDJ020000002.1 tpg gene 13105 14571 . + . ID=gene-O5D79_000365;Name=O5D79_000365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000365 DALFDJ020000002.1 Protein Homology CDS 13105 14571 . + 0 ID=cds-HJH9161938.1;Parent=gene-O5D79_000365;Dbxref=NCBI_GP:HJH9161938.1;Name=HJH9161938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460513.1;locus_tag=O5D79_000365;product=hypothetical protein;protein_id=HJH9161938.1;transl_table=11 DALFDJ020000002.1 tpg gene 14873 15154 . + . ID=gene-O5D79_000366;Name=O5D79_000366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000366 DALFDJ020000002.1 Protein Homology CDS 14873 15154 . + 0 ID=cds-HJH9161939.1;Parent=gene-O5D79_000366;Dbxref=NCBI_GP:HJH9161939.1;Name=HJH9161939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000742002.1;locus_tag=O5D79_000366;product=hypothetical protein;protein_id=HJH9161939.1;transl_table=11 DALFDJ020000002.1 tpg gene 15443 15775 . - . ID=gene-O5D79_000367;Name=O5D79_000367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000367 DALFDJ020000002.1 Protein Homology CDS 15443 15775 . - 0 ID=cds-HJH9161940.1;Parent=gene-O5D79_000367;Dbxref=NCBI_GP:HJH9161940.1;Name=HJH9161940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253166.1;locus_tag=O5D79_000367;product=DUF1493 family protein;protein_id=HJH9161940.1;transl_table=11 DALFDJ020000002.1 tpg pseudogene 15769 15867 . - . ID=gene-O5D79_000368;Name=O5D79_000368;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_000368;pseudo=true DALFDJ020000002.1 Protein Homology CDS 15769 15867 . - 0 ID=cds-O5D79_000368;Parent=gene-O5D79_000368;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_090138499.1;locus_tag=O5D79_000368;product=STM2901 family protein;pseudo=true;transl_table=11 DALFDJ020000002.1 tpg pseudogene 15861 15980 . - . ID=gene-O5D79_000369;Name=O5D79_000369;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_000369;pseudo=true DALFDJ020000002.1 Protein Homology CDS 15861 15980 . - 0 ID=cds-O5D79_000369;Parent=gene-O5D79_000369;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001388363.1;locus_tag=O5D79_000369;product=type II secretion system protein GspD;pseudo=true;transl_table=11 DALFDJ020000002.1 tpg gene 16132 16380 . + . ID=gene-O5D79_000370;Name=O5D79_000370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000370 DALFDJ020000002.1 Protein Homology CDS 16132 16380 . + 0 ID=cds-HJH9161941.1;Parent=gene-O5D79_000370;Dbxref=NCBI_GP:HJH9161941.1;Name=HJH9161941.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460511.1;locus_tag=O5D79_000370;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=HJH9161941.1;transl_table=11 DALFDJ020000002.1 tpg gene 16370 16654 . + . ID=gene-O5D79_000371;Name=O5D79_000371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000371 DALFDJ020000002.1 Protein Homology CDS 16370 16654 . + 0 ID=cds-HJH9161942.1;Parent=gene-O5D79_000371;Dbxref=NCBI_GP:HJH9161942.1;Name=HJH9161942.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460510.1;locus_tag=O5D79_000371;product=type II toxin-antitoxin system RelE family toxin;protein_id=HJH9161942.1;transl_table=11 DALFDJ020000002.1 tpg gene 16825 17214 . + . ID=gene-O5D79_000372;Name=O5D79_000372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000372 DALFDJ020000002.1 Protein Homology CDS 16825 17214 . + 0 ID=cds-HJH9161943.1;Parent=gene-O5D79_000372;Dbxref=NCBI_GP:HJH9161943.1;Name=HJH9161943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460509.1;locus_tag=O5D79_000372;product=RidA family protein;protein_id=HJH9161943.1;transl_table=11 DALFDJ020000002.1 tpg gene 17262 18341 . - . ID=gene-O5D79_000373;Name=O5D79_000373;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000373 DALFDJ020000002.1 Protein Homology CDS 17262 18341 . - 0 ID=cds-HJH9161944.1;Parent=gene-O5D79_000373;Dbxref=NCBI_GP:HJH9161944.1;Name=HJH9161944.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000954687.1;locus_tag=O5D79_000373;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=HJH9161944.1;transl_table=11 DALFDJ020000002.1 tpg gene 18534 19022 . - . ID=gene-O5D79_000374;Name=O5D79_000374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000374 DALFDJ020000002.1 Protein Homology CDS 18534 19022 . - 0 ID=cds-HJH9161945.1;Parent=gene-O5D79_000374;Dbxref=NCBI_GP:HJH9161945.1;Name=HJH9161945.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460507.1;locus_tag=O5D79_000374;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=HJH9161945.1;transl_table=11 DALFDJ020000002.1 tpg gene 19067 20575 . + . ID=gene-O5D79_000375;Name=O5D79_000375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000375 DALFDJ020000002.1 Protein Homology CDS 19067 20575 . + 0 ID=cds-HJH9161946.1;Parent=gene-O5D79_000375;Dbxref=NCBI_GP:HJH9161946.1;Name=HJH9161946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460506.1;locus_tag=O5D79_000375;product=FAD-dependent oxidoreductase;protein_id=HJH9161946.1;transl_table=11 DALFDJ020000002.1 tpg gene 20565 21806 . + . ID=gene-O5D79_000376;Name=O5D79_000376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000376 DALFDJ020000002.1 Protein Homology CDS 20565 21806 . + 0 ID=cds-HJH9161947.1;Parent=gene-O5D79_000376;Dbxref=NCBI_GP:HJH9161947.1;Name=HJH9161947.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460505.1;locus_tag=O5D79_000376;product=MFS transporter;protein_id=HJH9161947.1;transl_table=11 DALFDJ020000002.1 tpg gene 21876 23432 . + . ID=gene-O5D79_000377;Name=O5D79_000377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000377 DALFDJ020000002.1 Protein Homology CDS 21876 23432 . + 0 ID=cds-HJH9161948.1;Parent=gene-O5D79_000377;Dbxref=NCBI_GP:HJH9161948.1;Name=HJH9161948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460504.1;locus_tag=O5D79_000377;product=PhoPQ-activated pathogenicity-related family protein;protein_id=HJH9161948.1;transl_table=11 DALFDJ020000002.1 tpg gene 23609 24895 . + . ID=gene-O5D79_000378;Name=O5D79_000378;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000378 DALFDJ020000002.1 Protein Homology CDS 23609 24895 . + 0 ID=cds-HJH9161949.1;Parent=gene-O5D79_000378;Dbxref=NCBI_GP:HJH9161949.1;Name=HJH9161949.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460503.1;locus_tag=O5D79_000378;product=MFS transporter;protein_id=HJH9161949.1;transl_table=11 DALFDJ020000002.1 tpg gene 24870 25895 . + . ID=gene-O5D79_000379;Name=O5D79_000379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000379 DALFDJ020000002.1 Protein Homology CDS 24870 25895 . + 0 ID=cds-HJH9161950.1;Parent=gene-O5D79_000379;Dbxref=NCBI_GP:HJH9161950.1;Name=HJH9161950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460502.1;locus_tag=O5D79_000379;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=HJH9161950.1;transl_table=11 DALFDJ020000002.1 tpg gene 25954 26745 . - . ID=gene-O5D79_000380;Name=O5D79_000380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000380 DALFDJ020000002.1 Protein Homology CDS 25954 26745 . - 0 ID=cds-HJH9161951.1;Parent=gene-O5D79_000380;Dbxref=NCBI_GP:HJH9161951.1;Name=HJH9161951.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460501.1;locus_tag=O5D79_000380;product=FadR/GntR family transcriptional regulator;protein_id=HJH9161951.1;transl_table=11 DALFDJ020000002.1 tpg gene 26791 27882 . - . ID=gene-O5D79_000381;Name=O5D79_000381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000381 DALFDJ020000002.1 Protein Homology CDS 26791 27882 . - 0 ID=cds-HJH9161952.1;Parent=gene-O5D79_000381;Dbxref=NCBI_GP:HJH9161952.1;Name=HJH9161952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460500.1;locus_tag=O5D79_000381;product=choloylglycine hydrolase family protein;protein_id=HJH9161952.1;transl_table=11 DALFDJ020000002.1 tpg gene 28300 29403 . + . ID=gene-O5D79_000382;Name=O5D79_000382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000382 DALFDJ020000002.1 Protein Homology CDS 28300 29403 . + 0 ID=cds-HJH9161953.1;Parent=gene-O5D79_000382;Dbxref=NCBI_GP:HJH9161953.1;Name=HJH9161953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460499.1;locus_tag=O5D79_000382;product=hydrogenase small subunit;protein_id=HJH9161953.1;transl_table=11 DALFDJ020000002.1 tpg gene 29406 31208 . + . ID=gene-O5D79_000383;Name=O5D79_000383;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000383 DALFDJ020000002.1 Protein Homology CDS 29406 31208 . + 0 ID=cds-HJH9161954.1;Parent=gene-O5D79_000383;Dbxref=NCBI_GP:HJH9161954.1;Name=HJH9161954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460498.1;locus_tag=O5D79_000383;product=nickel-dependent hydrogenase large subunit;protein_id=HJH9161954.1;transl_table=11 DALFDJ020000002.1 tpg gene 31159 31902 . + . ID=gene-O5D79_000384;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=O5D79_000384 DALFDJ020000002.1 Protein Homology CDS 31159 31902 . + 0 ID=cds-HJH9161955.1;Parent=gene-O5D79_000384;Dbxref=NCBI_GP:HJH9161955.1;Name=HJH9161955.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460497.1;locus_tag=O5D79_000384;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=HJH9161955.1;transl_table=11 DALFDJ020000002.1 tpg gene 31908 32516 . + . ID=gene-O5D79_000385;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=O5D79_000385 DALFDJ020000002.1 Protein Homology CDS 31908 32516 . + 0 ID=cds-HJH9161956.1;Parent=gene-O5D79_000385;Dbxref=NCBI_GP:HJH9161956.1;Name=HJH9161956.1;Ontology_term=GO:0051604,GO:0004190,GO:0046872,GO:0009375;gbkey=CDS;gene=hybD;go_component=ferredoxin hydrogenase complex|0009375||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA,metal ion binding|0046872||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460496.1;locus_tag=O5D79_000385;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=HJH9161956.1;transl_table=11 DALFDJ020000002.1 tpg gene 32516 32815 . + . ID=gene-O5D79_000386;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=O5D79_000386 DALFDJ020000002.1 Protein Homology CDS 32516 32815 . + 0 ID=cds-HJH9161957.1;Parent=gene-O5D79_000386;Dbxref=NCBI_GP:HJH9161957.1;Name=HJH9161957.1;Ontology_term=GO:0065003,GO:0016530,GO:0051082;gbkey=CDS;gene=hypC;go_function=metallochaperone activity|0016530||IEA,unfolded protein binding|0051082||IEA;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460495.1;locus_tag=O5D79_000386;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=HJH9161957.1;transl_table=11 DALFDJ020000002.1 tpg gene 32812 33222 . + . ID=gene-O5D79_000387;Name=O5D79_000387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000387 DALFDJ020000002.1 Protein Homology CDS 32812 33222 . + 0 ID=cds-HJH9161958.1;Parent=gene-O5D79_000387;Dbxref=NCBI_GP:HJH9161958.1;Name=HJH9161958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460494.1;locus_tag=O5D79_000387;product=hydrogenase;protein_id=HJH9161958.1;transl_table=11 DALFDJ020000002.1 tpg gene 33240 34301 . + . ID=gene-O5D79_000388;Name=O5D79_000388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000388 DALFDJ020000002.1 Protein Homology CDS 33240 34301 . + 0 ID=cds-HJH9161959.1;Parent=gene-O5D79_000388;Dbxref=NCBI_GP:HJH9161959.1;Name=HJH9161959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460493.1;locus_tag=O5D79_000388;product=hydrogenase expression/formation C-terminal domain-containing protein;protein_id=HJH9161959.1;transl_table=11 DALFDJ020000002.1 tpg gene 34289 35176 . + . ID=gene-O5D79_000389;Name=O5D79_000389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000389 DALFDJ020000002.1 Protein Homology CDS 34289 35176 . + 0 ID=cds-HJH9161960.1;Parent=gene-O5D79_000389;Dbxref=NCBI_GP:HJH9161960.1;Name=HJH9161960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460492.1;locus_tag=O5D79_000389;product=ATP/GTP-binding protein;protein_id=HJH9161960.1;transl_table=11 DALFDJ020000002.1 tpg gene 35189 35530 . + . ID=gene-O5D79_000390;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=O5D79_000390 DALFDJ020000002.1 Protein Homology CDS 35189 35530 . + 0 ID=cds-HJH9161961.1;Parent=gene-O5D79_000390;Dbxref=NCBI_GP:HJH9161961.1;Name=HJH9161961.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460491.1;locus_tag=O5D79_000390;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=HJH9161961.1;transl_table=11 DALFDJ020000002.1 tpg gene 35671 36789 . - . ID=gene-O5D79_000391;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=O5D79_000391 DALFDJ020000002.1 Protein Homology CDS 35671 36789 . - 0 ID=cds-HJH9161962.1;Parent=gene-O5D79_000391;Dbxref=NCBI_GP:HJH9161962.1;Name=HJH9161962.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460490.1;locus_tag=O5D79_000391;product=porin OmpC;protein_id=HJH9161962.1;transl_table=11 DALFDJ020000002.1 tpg gene 37506 38048 . + . ID=gene-O5D79_000392;Name=O5D79_000392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000392 DALFDJ020000002.1 Protein Homology CDS 37506 38048 . + 0 ID=cds-HJH9161963.1;Parent=gene-O5D79_000392;Dbxref=NCBI_GP:HJH9161963.1;Name=HJH9161963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460488.1;locus_tag=O5D79_000392;product=YybH family protein;protein_id=HJH9161963.1;transl_table=11 DALFDJ020000002.1 tpg gene 38104 39018 . - . ID=gene-O5D79_000393;Name=O5D79_000393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000393 DALFDJ020000002.1 Protein Homology CDS 38104 39018 . - 0 ID=cds-HJH9161964.1;Parent=gene-O5D79_000393;Dbxref=NCBI_GP:HJH9161964.1;Name=HJH9161964.1;Ontology_term=GO:0005254;gbkey=CDS;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=O5D79_000393;product=bestrophin family protein;protein_id=HJH9161964.1;transl_table=11 DALFDJ020000002.1 tpg gene 39274 39633 . - . ID=gene-O5D79_000394;Name=O5D79_000394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000394 DALFDJ020000002.1 Protein Homology CDS 39274 39633 . - 0 ID=cds-HJH9161965.1;Parent=gene-O5D79_000394;Dbxref=NCBI_GP:HJH9161965.1;Name=HJH9161965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460486.1;locus_tag=O5D79_000394;product=DUF4186 domain-containing protein;protein_id=HJH9161965.1;transl_table=11 DALFDJ020000002.1 tpg gene 39633 40559 . - . ID=gene-O5D79_000395;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=O5D79_000395 DALFDJ020000002.1 Protein Homology CDS 39633 40559 . - 0 ID=cds-HJH9161966.1;Parent=gene-O5D79_000395;Dbxref=NCBI_GP:HJH9161966.1;Name=HJH9161966.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460485.1;locus_tag=O5D79_000395;product=glutaminase B;protein_id=HJH9161966.1;transl_table=11 DALFDJ020000002.1 tpg gene 40632 42020 . - . ID=gene-O5D79_000396;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=O5D79_000396 DALFDJ020000002.1 Protein Homology CDS 40632 42020 . - 0 ID=cds-HJH9161967.1;Parent=gene-O5D79_000396;Dbxref=NCBI_GP:HJH9161967.1;Name=HJH9161967.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460484.1;locus_tag=O5D79_000396;product=succinate-semialdehyde dehydrogenase;protein_id=HJH9161967.1;transl_table=11 DALFDJ020000002.1 tpg gene 42123 42995 . + . ID=gene-O5D79_000397;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=O5D79_000397 DALFDJ020000002.1 Protein Homology CDS 42123 42995 . + 0 ID=cds-HJH9161968.1;Parent=gene-O5D79_000397;Dbxref=NCBI_GP:HJH9161968.1;Name=HJH9161968.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460483.1;locus_tag=O5D79_000397;product=putrescine utilization regulator PtrR;protein_id=HJH9161968.1;transl_table=11 DALFDJ020000002.1 tpg gene 43111 44301 . + . ID=gene-O5D79_000398;Name=O5D79_000398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000398 DALFDJ020000002.1 Protein Homology CDS 43111 44301 . + 0 ID=cds-HJH9161969.1;Parent=gene-O5D79_000398;Dbxref=NCBI_GP:HJH9161969.1;Name=HJH9161969.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460482.1;locus_tag=O5D79_000398;product=sugar transporter;protein_id=HJH9161969.1;transl_table=11 DALFDJ020000002.1 tpg gene 44349 45014 . - . ID=gene-O5D79_000399;Name=O5D79_000399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000399 DALFDJ020000002.1 Protein Homology CDS 44349 45014 . - 0 ID=cds-HJH9161970.1;Parent=gene-O5D79_000399;Dbxref=NCBI_GP:HJH9161970.1;Name=HJH9161970.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460481.1;locus_tag=O5D79_000399;product=MarC family NAAT transporter;protein_id=HJH9161970.1;transl_table=11 DALFDJ020000002.1 tpg gene 45273 45707 . + . ID=gene-O5D79_000400;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=O5D79_000400 DALFDJ020000002.1 Protein Homology CDS 45273 45707 . + 0 ID=cds-HJH9161971.1;Parent=gene-O5D79_000400;Dbxref=NCBI_GP:HJH9161971.1;Name=HJH9161971.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=O5D79_000400;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=HJH9161971.1;transl_table=11 DALFDJ020000002.1 tpg gene 45727 46110 . + . ID=gene-O5D79_000401;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=O5D79_000401 DALFDJ020000002.1 Protein Homology CDS 45727 46110 . + 0 ID=cds-HJH9161972.1;Parent=gene-O5D79_000401;Dbxref=NCBI_GP:HJH9161972.1;Name=HJH9161972.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091194.1;locus_tag=O5D79_000401;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=HJH9161972.1;transl_table=11 DALFDJ020000002.1 tpg gene 46139 46354 . + . ID=gene-O5D79_000402;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=O5D79_000402 DALFDJ020000002.1 Protein Homology CDS 46139 46354 . + 0 ID=cds-HJH9161973.1;Parent=gene-O5D79_000402;Dbxref=NCBI_GP:HJH9161973.1;Name=HJH9161973.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460478.1;locus_tag=O5D79_000402;product=multiple antibiotic resistance protein MarB;protein_id=HJH9161973.1;transl_table=11 DALFDJ020000002.1 tpg gene 46473 47375 . - . ID=gene-O5D79_000403;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=O5D79_000403 DALFDJ020000002.1 Protein Homology CDS 46473 47375 . - 0 ID=cds-HJH9161974.1;Parent=gene-O5D79_000403;Dbxref=NCBI_GP:HJH9161974.1;Name=HJH9161974.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460477.1;locus_tag=O5D79_000403;product=O-acetylserine/cysteine exporter;protein_id=HJH9161974.1;transl_table=11 DALFDJ020000002.1 tpg gene 47603 48790 . + . ID=gene-O5D79_000404;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=O5D79_000404 DALFDJ020000002.1 Protein Homology CDS 47603 48790 . + 0 ID=cds-HJH9161975.1;Parent=gene-O5D79_000404;Dbxref=NCBI_GP:HJH9161975.1;Name=HJH9161975.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460476.1;locus_tag=O5D79_000404;product=efflux MFS transporter YdeE;protein_id=HJH9161975.1;transl_table=11 DALFDJ020000002.1 tpg gene 49038 49133 . + . ID=gene-O5D79_000405;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=O5D79_000405 DALFDJ020000002.1 Protein Homology CDS 49038 49133 . + 0 ID=cds-HJH9161976.1;Parent=gene-O5D79_000405;Dbxref=NCBI_GP:HJH9161976.1;Name=HJH9161976.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=O5D79_000405;product=protein MgtS;protein_id=HJH9161976.1;transl_table=11 DALFDJ020000002.1 tpg gene 49481 49873 . - . ID=gene-O5D79_000406;Name=O5D79_000406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000406 DALFDJ020000002.1 Protein Homology CDS 49481 49873 . - 0 ID=cds-HJH9161977.1;Parent=gene-O5D79_000406;Dbxref=NCBI_GP:HJH9161977.1;Name=HJH9161977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460475.1;locus_tag=O5D79_000406;product=YdeI family stress tolerance OB fold protein;protein_id=HJH9161977.1;transl_table=11 DALFDJ020000002.1 tpg gene 50300 50827 . + . ID=gene-O5D79_000407;Name=O5D79_000407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000407 DALFDJ020000002.1 Protein Homology CDS 50300 50827 . + 0 ID=cds-HJH9161978.1;Parent=gene-O5D79_000407;Dbxref=NCBI_GP:HJH9161978.1;Name=HJH9161978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460474.1;locus_tag=O5D79_000407;product=2-oxo-tetronate isomerase;protein_id=HJH9161978.1;transl_table=11 DALFDJ020000002.1 tpg gene 50946 51128 . - . ID=gene-O5D79_000408;Name=O5D79_000408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000408 DALFDJ020000002.1 Protein Homology CDS 50946 51128 . - 0 ID=cds-HJH9161979.1;Parent=gene-O5D79_000408;Dbxref=NCBI_GP:HJH9161979.1;Name=HJH9161979.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460473.1;locus_tag=O5D79_000408;product=general stress protein;protein_id=HJH9161979.1;transl_table=11 DALFDJ020000002.1 tpg gene 51473 53515 . - . ID=gene-O5D79_000409;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=O5D79_000409 DALFDJ020000002.1 Protein Homology CDS 51473 53515 . - 0 ID=cds-HJH9161980.1;Parent=gene-O5D79_000409;Dbxref=NCBI_GP:HJH9161980.1;Name=HJH9161980.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460472.1;locus_tag=O5D79_000409;product=peptidyl-dipeptidase Dcp;protein_id=HJH9161980.1;transl_table=11 DALFDJ020000002.1 tpg gene 53654 54400 . + . ID=gene-O5D79_000410;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=O5D79_000410 DALFDJ020000002.1 Protein Homology CDS 53654 54400 . + 0 ID=cds-HJH9161981.1;Parent=gene-O5D79_000410;Dbxref=NCBI_GP:HJH9161981.1;Name=HJH9161981.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460471.1;locus_tag=O5D79_000410;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=HJH9161981.1;transl_table=11 DALFDJ020000002.1 tpg gene 54530 55216 . + . ID=gene-O5D79_000411;Name=O5D79_000411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000411 DALFDJ020000002.1 Protein Homology CDS 54530 55216 . + 0 ID=cds-HJH9161982.1;Parent=gene-O5D79_000411;Dbxref=NCBI_GP:HJH9161982.1;Name=HJH9161982.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460470.1;locus_tag=O5D79_000411;product=GntR family transcriptional regulator;protein_id=HJH9161982.1;transl_table=11 DALFDJ020000002.1 tpg gene 55397 55600 . + . ID=gene-O5D79_000412;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=O5D79_000412 DALFDJ020000002.1 Protein Homology CDS 55397 55600 . + 0 ID=cds-HJH9161983.1;Parent=gene-O5D79_000412;Dbxref=NCBI_GP:HJH9161983.1;Name=HJH9161983.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460469.1;locus_tag=O5D79_000412;product=putative selenium delivery protein YdfZ;protein_id=HJH9161983.1;transl_table=11 DALFDJ020000002.1 tpg gene 55667 57133 . - . ID=gene-O5D79_000413;Name=O5D79_000413;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000413 DALFDJ020000002.1 Protein Homology CDS 55667 57133 . - 0 ID=cds-HJH9161984.1;Parent=gene-O5D79_000413;Dbxref=NCBI_GP:HJH9161984.1;Name=HJH9161984.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460468.1;locus_tag=O5D79_000413;product=mannitol dehydrogenase family protein;protein_id=HJH9161984.1;transl_table=11 DALFDJ020000002.1 tpg gene 57277 58656 . - . ID=gene-O5D79_000414;Name=O5D79_000414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000414 DALFDJ020000002.1 Protein Homology CDS 57277 58656 . - 0 ID=cds-HJH9161985.1;Parent=gene-O5D79_000414;Dbxref=NCBI_GP:HJH9161985.1;Name=HJH9161985.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210164.1;locus_tag=O5D79_000414;product=MFS transporter;protein_id=HJH9161985.1;transl_table=11 DALFDJ020000002.1 tpg gene 58710 59729 . - . ID=gene-O5D79_000415;Name=O5D79_000415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000415 DALFDJ020000002.1 Protein Homology CDS 58710 59729 . - 0 ID=cds-HJH9161986.1;Parent=gene-O5D79_000415;Dbxref=NCBI_GP:HJH9161986.1;Name=HJH9161986.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460466.1;locus_tag=O5D79_000415;product=Zn-dependent oxidoreductase;protein_id=HJH9161986.1;transl_table=11 DALFDJ020000002.1 tpg gene 59740 60954 . - . ID=gene-O5D79_000416;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=O5D79_000416 DALFDJ020000002.1 Protein Homology CDS 59740 60954 . - 0 ID=cds-HJH9161987.1;Parent=gene-O5D79_000416;Dbxref=NCBI_GP:HJH9161987.1;Name=HJH9161987.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=O5D79_000416;product=starvation-sensing protein RspA;protein_id=HJH9161987.1;transl_table=11 DALFDJ020000002.1 tpg gene 61075 61401 . - . ID=gene-O5D79_000417;Name=O5D79_000417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000417 DALFDJ020000002.1 Protein Homology CDS 61075 61401 . - 0 ID=cds-HJH9161988.1;Parent=gene-O5D79_000417;Dbxref=NCBI_GP:HJH9161988.1;Name=HJH9161988.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460464.1;locus_tag=O5D79_000417;product=YnfA family protein;protein_id=HJH9161988.1;transl_table=11 DALFDJ020000002.1 tpg gene 61554 61895 . + . ID=gene-O5D79_000418;Name=O5D79_000418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000418 DALFDJ020000002.1 Protein Homology CDS 61554 61895 . + 0 ID=cds-HJH9161989.1;Parent=gene-O5D79_000418;Dbxref=NCBI_GP:HJH9161989.1;Name=HJH9161989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460463.1;locus_tag=O5D79_000418;product=DUF1283 family protein;protein_id=HJH9161989.1;transl_table=11 DALFDJ020000002.1 tpg gene 61931 62491 . + . ID=gene-O5D79_000419;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=O5D79_000419 DALFDJ020000002.1 Protein Homology CDS 61931 62491 . + 0 ID=cds-HJH9161990.1;Parent=gene-O5D79_000419;Dbxref=NCBI_GP:HJH9161990.1;Name=HJH9161990.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460462.1;locus_tag=O5D79_000419;product=spermidine N1-acetyltransferase;protein_id=HJH9161990.1;transl_table=11 DALFDJ020000002.1 tpg gene 62532 63242 . - . ID=gene-O5D79_000420;Name=O5D79_000420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000420 DALFDJ020000002.1 Protein Homology CDS 62532 63242 . - 0 ID=cds-HJH9161991.1;Parent=gene-O5D79_000420;Dbxref=NCBI_GP:HJH9161991.1;Name=HJH9161991.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465701.1;locus_tag=O5D79_000420;product=YnfC family lipoprotein;protein_id=HJH9161991.1;transl_table=11 DALFDJ020000002.1 tpg gene 63346 63654 . + . ID=gene-O5D79_000421;Name=O5D79_000421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000421 DALFDJ020000002.1 Protein Homology CDS 63346 63654 . + 0 ID=cds-HJH9161992.1;Parent=gene-O5D79_000421;Dbxref=NCBI_GP:HJH9161992.1;Name=HJH9161992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460460.1;locus_tag=O5D79_000421;product=DUF1161 domain-containing protein;protein_id=HJH9161992.1;transl_table=11 DALFDJ020000002.1 tpg gene 63811 66249 . + . ID=gene-O5D79_000422;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=O5D79_000422 DALFDJ020000002.1 Protein Homology CDS 63811 66249 . + 0 ID=cds-HJH9161993.1;Parent=gene-O5D79_000422;Dbxref=NCBI_GP:HJH9161993.1;Name=HJH9161993.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006788576.1;locus_tag=O5D79_000422;product=selenate/tellurate reductase subunit YnfE;protein_id=HJH9161993.1;transl_table=11 DALFDJ020000002.1 tpg gene 66348 68783 . + . ID=gene-O5D79_000423;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=O5D79_000423 DALFDJ020000002.1 Protein Homology CDS 66348 68783 . + 0 ID=cds-HJH9161994.1;Parent=gene-O5D79_000423;Dbxref=NCBI_GP:HJH9161994.1;Name=HJH9161994.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460458.1;locus_tag=O5D79_000423;product=selenate/tellurate reductase subunit YnfF;protein_id=HJH9161994.1;transl_table=11 DALFDJ020000002.1 tpg gene 68794 69411 . + . ID=gene-O5D79_000424;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=O5D79_000424 DALFDJ020000002.1 Protein Homology CDS 68794 69411 . + 0 ID=cds-HJH9161995.1;Parent=gene-O5D79_000424;Dbxref=NCBI_GP:HJH9161995.1;Name=HJH9161995.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=O5D79_000424;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=HJH9161995.1;transl_table=11 DALFDJ020000002.1 tpg gene 69413 70270 . + . ID=gene-O5D79_000425;Name=O5D79_000425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000425 DALFDJ020000002.1 Protein Homology CDS 69413 70270 . + 0 ID=cds-HJH9161996.1;Parent=gene-O5D79_000425;Dbxref=NCBI_GP:HJH9161996.1;Name=HJH9161996.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460456.1;locus_tag=O5D79_000425;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=HJH9161996.1;transl_table=11 DALFDJ020000002.1 tpg gene 70313 70927 . + . ID=gene-O5D79_000426;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=O5D79_000426 DALFDJ020000002.1 Protein Homology CDS 70313 70927 . + 0 ID=cds-HJH9161997.1;Parent=gene-O5D79_000426;Dbxref=NCBI_GP:HJH9161997.1;Name=HJH9161997.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460455.1;locus_tag=O5D79_000426;product=Tat proofreading chaperone DmsD;protein_id=HJH9161997.1;transl_table=11 DALFDJ020000002.1 tpg gene 71232 71942 . + . ID=gene-O5D79_000427;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=O5D79_000427 DALFDJ020000002.1 Protein Homology CDS 71232 71942 . + 0 ID=cds-HJH9161998.1;Parent=gene-O5D79_000427;Dbxref=NCBI_GP:HJH9161998.1;Name=HJH9161998.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460454.1;locus_tag=O5D79_000427;product=osmoprotectant ABC transporter permease OsmY;protein_id=HJH9161998.1;transl_table=11 DALFDJ020000002.1 tpg gene 71971 72873 . + . ID=gene-O5D79_000428;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=O5D79_000428 DALFDJ020000002.1 Protein Homology CDS 71971 72873 . + 0 ID=cds-HJH9161999.1;Parent=gene-O5D79_000428;Dbxref=NCBI_GP:HJH9161999.1;Name=HJH9161999.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460453.1;locus_tag=O5D79_000428;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=HJH9161999.1;transl_table=11 DALFDJ020000002.1 tpg gene 72883 73530 . + . ID=gene-O5D79_000429;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=O5D79_000429 DALFDJ020000002.1 Protein Homology CDS 72883 73530 . + 0 ID=cds-HJH9162000.1;Parent=gene-O5D79_000429;Dbxref=NCBI_GP:HJH9162000.1;Name=HJH9162000.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460452.1;locus_tag=O5D79_000429;product=osmoprotectant ABC transporter permease OsmW;protein_id=HJH9162000.1;transl_table=11 DALFDJ020000002.1 tpg gene 73530 74678 . + . ID=gene-O5D79_000430;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=O5D79_000430 DALFDJ020000002.1 Protein Homology CDS 73530 74678 . + 0 ID=cds-HJH9162001.1;Parent=gene-O5D79_000430;Dbxref=NCBI_GP:HJH9162001.1;Name=HJH9162001.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460451.1;locus_tag=O5D79_000430;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=HJH9162001.1;transl_table=11 DALFDJ020000002.1 tpg gene 74814 76103 . + . ID=gene-O5D79_000431;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=O5D79_000431 DALFDJ020000002.1 Protein Homology CDS 74814 76103 . + 0 ID=cds-HJH9162002.1;Parent=gene-O5D79_000431;Dbxref=NCBI_GP:HJH9162002.1;Name=HJH9162002.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460450.3;locus_tag=O5D79_000431;product=voltage-gated ClC-type chloride channel ClcB;protein_id=HJH9162002.1;transl_table=11 DALFDJ020000002.1 tpg gene 76059 76754 . - . ID=gene-O5D79_000432;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=O5D79_000432 DALFDJ020000002.1 Protein Homology CDS 76059 76754 . - 0 ID=cds-HJH9162003.1;Parent=gene-O5D79_000432;Dbxref=NCBI_GP:HJH9162003.1;Name=HJH9162003.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=O5D79_000432;product=dethiobiotin synthase;protein_id=HJH9162003.1;transl_table=11 DALFDJ020000002.1 tpg gene 76880 78100 . - . ID=gene-O5D79_000433;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=O5D79_000433 DALFDJ020000002.1 Protein Homology CDS 76880 78100 . - 0 ID=cds-HJH9162004.1;Parent=gene-O5D79_000433;Dbxref=NCBI_GP:HJH9162004.1;Name=HJH9162004.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460448.1;locus_tag=O5D79_000433;product=sugar metabolism global transcriptional regulator Mlc;protein_id=HJH9162004.1;transl_table=11 DALFDJ020000002.1 tpg gene 78228 79127 . - . ID=gene-O5D79_000434;Name=O5D79_000434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000434 DALFDJ020000002.1 Protein Homology CDS 78228 79127 . - 0 ID=cds-HJH9162005.1;Parent=gene-O5D79_000434;Dbxref=NCBI_GP:HJH9162005.1;Name=HJH9162005.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460447.1;locus_tag=O5D79_000434;product=LysR family transcriptional regulator;protein_id=HJH9162005.1;transl_table=11 DALFDJ020000002.1 tpg gene 79247 80500 . + . ID=gene-O5D79_000435;Name=O5D79_000435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000435 DALFDJ020000002.1 Protein Homology CDS 79247 80500 . + 0 ID=cds-HJH9162006.1;Parent=gene-O5D79_000435;Dbxref=NCBI_GP:HJH9162006.1;Name=HJH9162006.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460446.1;locus_tag=O5D79_000435;product=MFS transporter;protein_id=HJH9162006.1;transl_table=11 DALFDJ020000002.1 tpg gene 80567 80659 . - . ID=gene-O5D79_000436;Name=O5D79_000436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000436 DALFDJ020000002.1 Protein Homology CDS 80567 80659 . - 0 ID=cds-HJH9162007.1;Parent=gene-O5D79_000436;Dbxref=NCBI_GP:HJH9162007.1;Name=HJH9162007.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=O5D79_000436;product=KPN_01571 family protein;protein_id=HJH9162007.1;transl_table=11 DALFDJ020000002.1 tpg gene 80895 81143 . + . ID=gene-O5D79_000437;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=O5D79_000437 DALFDJ020000002.1 Protein Homology CDS 80895 81143 . + 0 ID=cds-HJH9162008.1;Parent=gene-O5D79_000437;Dbxref=NCBI_GP:HJH9162008.1;Name=HJH9162008.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001698353.1;locus_tag=O5D79_000437;product=acid resistance repetitive basic protein Asr;protein_id=HJH9162008.1;transl_table=11 DALFDJ020000002.1 tpg gene 81412 82233 . + . ID=gene-O5D79_000438;Name=O5D79_000438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000438 DALFDJ020000002.1 Protein Homology CDS 81412 82233 . + 0 ID=cds-HJH9162009.1;Parent=gene-O5D79_000438;Dbxref=NCBI_GP:HJH9162009.1;Name=HJH9162009.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460444.1;locus_tag=O5D79_000438;product=trypsin-like serine peptidase;protein_id=HJH9162009.1;transl_table=11 DALFDJ020000002.1 tpg gene 82268 82597 . - . ID=gene-O5D79_000439;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=O5D79_000439 DALFDJ020000002.1 Protein Homology CDS 82268 82597 . - 0 ID=cds-HJH9162010.1;Parent=gene-O5D79_000439;Dbxref=NCBI_GP:HJH9162010.1;Name=HJH9162010.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460443.1;locus_tag=O5D79_000439;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=HJH9162010.1;transl_table=11 DALFDJ020000002.1 tpg gene 82584 82946 . - . ID=gene-O5D79_000440;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=O5D79_000440 DALFDJ020000002.1 Protein Homology CDS 82584 82946 . - 0 ID=cds-HJH9162011.1;Parent=gene-O5D79_000440;Dbxref=NCBI_GP:HJH9162011.1;Name=HJH9162011.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460442.1;locus_tag=O5D79_000440;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=HJH9162011.1;transl_table=11 DALFDJ020000002.1 tpg gene 83058 83228 . - . ID=gene-O5D79_000441;Name=O5D79_000441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000441 DALFDJ020000002.1 Protein Homology CDS 83058 83228 . - 0 ID=cds-HJH9162012.1;Parent=gene-O5D79_000441;Dbxref=NCBI_GP:HJH9162012.1;Name=HJH9162012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=O5D79_000441;product=hypothetical protein;protein_id=HJH9162012.1;transl_table=11 DALFDJ020000002.1 tpg gene 83364 84398 . + . ID=gene-O5D79_000442;Name=O5D79_000442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000442 DALFDJ020000002.1 Protein Homology CDS 83364 84398 . + 0 ID=cds-HJH9162013.1;Parent=gene-O5D79_000442;Dbxref=NCBI_GP:HJH9162013.1;Name=HJH9162013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460441.1;locus_tag=O5D79_000442;product=AI-2E family transporter;protein_id=HJH9162013.1;transl_table=11 DALFDJ020000002.1 tpg gene 84573 85961 . - . ID=gene-O5D79_000443;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=O5D79_000443 DALFDJ020000002.1 Protein Homology CDS 84573 85961 . - 0 ID=cds-HJH9162014.1;Parent=gene-O5D79_000443;Dbxref=NCBI_GP:HJH9162014.1;Name=HJH9162014.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=O5D79_000443;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=HJH9162014.1;transl_table=11 DALFDJ020000002.1 tpg gene 85972 87501 . - . ID=gene-O5D79_000444;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=O5D79_000444 DALFDJ020000002.1 Protein Homology CDS 85972 87501 . - 0 ID=cds-HJH9162015.1;Parent=gene-O5D79_000444;Dbxref=NCBI_GP:HJH9162015.1;Name=HJH9162015.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460439.1;locus_tag=O5D79_000444;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=HJH9162015.1;transl_table=11 DALFDJ020000002.1 tpg gene 88028 88972 . + . ID=gene-O5D79_000445;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=O5D79_000445 DALFDJ020000002.1 Protein Homology CDS 88028 88972 . + 0 ID=cds-HJH9162016.1;Parent=gene-O5D79_000445;Dbxref=NCBI_GP:HJH9162016.1;Name=HJH9162016.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=O5D79_000445;product=DUF1471 family protein YdgH;protein_id=HJH9162016.1;transl_table=11 DALFDJ020000002.1 tpg gene 89271 90653 . + . ID=gene-O5D79_000446;Name=O5D79_000446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000446 DALFDJ020000002.1 Protein Homology CDS 89271 90653 . + 0 ID=cds-HJH9162017.1;Parent=gene-O5D79_000446;Dbxref=NCBI_GP:HJH9162017.1;Name=HJH9162017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460437.1;locus_tag=O5D79_000446;product=amino acid permease;protein_id=HJH9162017.1;transl_table=11 DALFDJ020000002.1 tpg gene 90715 91050 . - . ID=gene-O5D79_000447;Name=O5D79_000447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000447 DALFDJ020000002.1 Protein Homology CDS 90715 91050 . - 0 ID=cds-HJH9162018.1;Parent=gene-O5D79_000447;Dbxref=NCBI_GP:HJH9162018.1;Name=HJH9162018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460436.1;locus_tag=O5D79_000447;product=GlpM family protein;protein_id=HJH9162018.1;transl_table=11 DALFDJ020000002.1 tpg gene 91177 91908 . + . ID=gene-O5D79_000448;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=O5D79_000448 DALFDJ020000002.1 Protein Homology CDS 91177 91908 . + 0 ID=cds-HJH9162019.1;Parent=gene-O5D79_000448;Dbxref=NCBI_GP:HJH9162019.1;Name=HJH9162019.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460435.1;locus_tag=O5D79_000448;product=two-component system response regulator RstA;protein_id=HJH9162019.1;transl_table=11 DALFDJ020000002.1 tpg gene 92387 93538 . + . ID=gene-O5D79_000449;Name=ompS2;gbkey=Gene;gene=ompS2;gene_biotype=protein_coding;locus_tag=O5D79_000449 DALFDJ020000002.1 Protein Homology CDS 92387 93538 . + 0 ID=cds-HJH9162020.1;Parent=gene-O5D79_000449;Dbxref=NCBI_GP:HJH9162020.1;Name=HJH9162020.1;gbkey=CDS;gene=ompS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460434.1;locus_tag=O5D79_000449;product=porin OmpS2;protein_id=HJH9162020.1;transl_table=11 DALFDJ020000002.1 tpg gene 93691 95397 . + . ID=gene-O5D79_000450;Name=O5D79_000450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000450 DALFDJ020000002.1 Protein Homology CDS 93691 95397 . + 0 ID=cds-HJH9162021.1;Parent=gene-O5D79_000450;Dbxref=NCBI_GP:HJH9162021.1;Name=HJH9162021.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460433.1;locus_tag=O5D79_000450;product=amidohydrolase;protein_id=HJH9162021.1;transl_table=11 DALFDJ020000002.1 tpg gene 95508 96809 . + . ID=gene-O5D79_000451;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=O5D79_000451 DALFDJ020000002.1 Protein Homology CDS 95508 96809 . + 0 ID=cds-HJH9162022.1;Parent=gene-O5D79_000451;Dbxref=NCBI_GP:HJH9162022.1;Name=HJH9162022.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460432.1;locus_tag=O5D79_000451;product=two-component system sensor histidine kinase RstB;protein_id=HJH9162022.1;transl_table=11 DALFDJ020000002.1 tpg gene 96885 97814 . + . ID=gene-O5D79_000452;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=O5D79_000452 DALFDJ020000002.1 Protein Homology CDS 96885 97814 . + 0 ID=cds-HJH9162023.1;Parent=gene-O5D79_000452;Dbxref=NCBI_GP:HJH9162023.1;Name=HJH9162023.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460431.1;locus_tag=O5D79_000452;product=DNA replication terminus site-binding protein;protein_id=HJH9162023.1;transl_table=11 DALFDJ020000002.1 tpg gene 97811 99214 . - . ID=gene-O5D79_000453;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=O5D79_000453 DALFDJ020000002.1 Protein Homology CDS 97811 99214 . - 0 ID=cds-HJH9162024.1;Parent=gene-O5D79_000453;Dbxref=NCBI_GP:HJH9162024.1;Name=HJH9162024.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460430.1;locus_tag=O5D79_000453;product=class II fumarate hydratase;protein_id=HJH9162024.1;transl_table=11 DALFDJ020000002.1 tpg gene 99382 101028 . - . ID=gene-O5D79_000454;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=O5D79_000454 DALFDJ020000002.1 Protein Homology CDS 99382 101028 . - 0 ID=cds-HJH9162025.1;Parent=gene-O5D79_000454;Dbxref=NCBI_GP:HJH9162025.1;Name=HJH9162025.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=O5D79_000454;product=class I fumarate hydratase;protein_id=HJH9162025.1;transl_table=11 DALFDJ020000002.1 tpg gene 101228 102403 . + . ID=gene-O5D79_000455;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=O5D79_000455 DALFDJ020000002.1 Protein Homology CDS 101228 102403 . + 0 ID=cds-HJH9162026.1;Parent=gene-O5D79_000455;Dbxref=NCBI_GP:HJH9162026.1;Name=HJH9162026.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460428.1;locus_tag=O5D79_000455;product=mannose-6-phosphate isomerase;protein_id=HJH9162026.1;transl_table=11 DALFDJ020000002.1 tpg gene 102506 104014 . + . ID=gene-O5D79_000456;Name=O5D79_000456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000456 DALFDJ020000002.1 Protein Homology CDS 102506 104014 . + 0 ID=cds-HJH9162027.1;Parent=gene-O5D79_000456;Dbxref=NCBI_GP:HJH9162027.1;Name=HJH9162027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460427.1;locus_tag=O5D79_000456;product=YdgA family protein;protein_id=HJH9162027.1;transl_table=11 DALFDJ020000002.1 tpg pseudogene 104133 104353 . + . ID=gene-O5D79_000457;Name=O5D79_000457;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_000457;pseudo=true DALFDJ020000002.1 Protein Homology CDS 104133 104353 . + 0 ID=cds-O5D79_000457;Parent=gene-O5D79_000457;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310356.1;locus_tag=O5D79_000457;product=glucose PTS transporter subunit EIIB;pseudo=true;transl_table=11 DALFDJ020000002.1 tpg pseudogene 104363 104494 . + . ID=gene-O5D79_000458;Name=O5D79_000458;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_000458;pseudo=true DALFDJ020000002.1 Protein Homology CDS 104363 104494 . + 0 ID=cds-O5D79_000458;Parent=gene-O5D79_000458;Note=catalyzes the formation of homocysteine and pyruvate from cystathionine%3B also acts a a negative regulator for the mal regulon but interacting with the transcriptional activator MalT%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000459379.1;locus_tag=O5D79_000458;product=transcriptional regulator;pseudo=true;transl_table=11 DALFDJ020000002.1 tpg gene 104719 105720 . + . ID=gene-O5D79_000459;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=O5D79_000459 DALFDJ020000002.1 Protein Homology CDS 104719 105720 . + 0 ID=cds-HJH9162028.1;Parent=gene-O5D79_000459;Dbxref=NCBI_GP:HJH9162028.1;Name=HJH9162028.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460426.1;locus_tag=O5D79_000459;product=adenosine deaminase;protein_id=HJH9162028.1;transl_table=11 DALFDJ020000002.1 tpg gene 105795 106835 . - . ID=gene-O5D79_000460;Name=O5D79_000460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000460 DALFDJ020000002.1 Protein Homology CDS 105795 106835 . - 0 ID=cds-HJH9162029.1;Parent=gene-O5D79_000460;Dbxref=NCBI_GP:HJH9162029.1;Name=HJH9162029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=O5D79_000460;product=oxidoreductase;protein_id=HJH9162029.1;transl_table=11 DALFDJ020000002.1 tpg gene 107043 107168 . + . ID=gene-O5D79_000461;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=O5D79_000461 DALFDJ020000002.1 Protein Homology CDS 107043 107168 . + 0 ID=cds-HJH9162030.1;Parent=gene-O5D79_000461;Dbxref=NCBI_GP:HJH9162030.1;Name=HJH9162030.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=O5D79_000461;product=division septum protein Blr;protein_id=HJH9162030.1;transl_table=11 DALFDJ020000002.1 tpg gene 107465 107680 . + . ID=gene-O5D79_000462;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=O5D79_000462 DALFDJ020000002.1 Protein Homology CDS 107465 107680 . + 0 ID=cds-HJH9162031.1;Parent=gene-O5D79_000462;Dbxref=NCBI_GP:HJH9162031.1;Name=HJH9162031.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=O5D79_000462;product=transcription modulator YdgT;protein_id=HJH9162031.1;transl_table=11 DALFDJ020000002.1 tpg gene 107769 108209 . + . ID=gene-O5D79_000463;Name=O5D79_000463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000463 DALFDJ020000002.1 Protein Homology CDS 107769 108209 . + 0 ID=cds-HJH9162032.1;Parent=gene-O5D79_000463;Dbxref=NCBI_GP:HJH9162032.1;Name=HJH9162032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460423.1;locus_tag=O5D79_000463;product=DUF2569 domain-containing protein;protein_id=HJH9162032.1;transl_table=11 DALFDJ020000002.1 tpg gene 108286 108867 . + . ID=gene-O5D79_000464;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=O5D79_000464 DALFDJ020000002.1 Protein Homology CDS 108286 108867 . + 0 ID=cds-HJH9162033.1;Parent=gene-O5D79_000464;Dbxref=NCBI_GP:HJH9162033.1;Name=HJH9162033.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=O5D79_000464;product=electron transport complex subunit RsxA;protein_id=HJH9162033.1;transl_table=11 DALFDJ020000002.1 tpg gene 108867 109445 . + . ID=gene-O5D79_000465;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=O5D79_000465 DALFDJ020000002.1 Protein Homology CDS 108867 109445 . + 0 ID=cds-HJH9162034.1;Parent=gene-O5D79_000465;Dbxref=NCBI_GP:HJH9162034.1;Name=HJH9162034.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460421.1;locus_tag=O5D79_000465;product=electron transport complex subunit RsxB;protein_id=HJH9162034.1;transl_table=11 DALFDJ020000002.1 tpg gene 109438 111645 . + . ID=gene-O5D79_000466;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=O5D79_000466 DALFDJ020000002.1 Protein Homology CDS 109438 111645 . + 0 ID=cds-HJH9162035.1;Parent=gene-O5D79_000466;Dbxref=NCBI_GP:HJH9162035.1;Name=HJH9162035.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=O5D79_000466;product=electron transport complex subunit RsxC;protein_id=HJH9162035.1;transl_table=11 DALFDJ020000002.1 tpg gene 111646 112704 . + . ID=gene-O5D79_000467;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=O5D79_000467 DALFDJ020000002.1 Protein Homology CDS 111646 112704 . + 0 ID=cds-HJH9162036.1;Parent=gene-O5D79_000467;Dbxref=NCBI_GP:HJH9162036.1;Name=HJH9162036.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460419.1;locus_tag=O5D79_000467;product=electron transport complex subunit RsxD;protein_id=HJH9162036.1;transl_table=11 DALFDJ020000002.1 tpg gene 112708 113328 . + . ID=gene-O5D79_000468;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=O5D79_000468 DALFDJ020000002.1 Protein Homology CDS 112708 113328 . + 0 ID=cds-HJH9162037.1;Parent=gene-O5D79_000468;Dbxref=NCBI_GP:HJH9162037.1;Name=HJH9162037.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460418.1;locus_tag=O5D79_000468;product=electron transport complex subunit RsxG;protein_id=HJH9162037.1;transl_table=11 DALFDJ020000002.1 tpg gene 113331 114023 . + . ID=gene-O5D79_000469;Name=O5D79_000469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000469 DALFDJ020000002.1 Protein Homology CDS 113331 114023 . + 0 ID=cds-HJH9162038.1;Parent=gene-O5D79_000469;Dbxref=NCBI_GP:HJH9162038.1;Name=HJH9162038.1;Ontology_term=GO:0022900;gbkey=CDS;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460417.1;locus_tag=O5D79_000469;product=electron transport complex subunit E;protein_id=HJH9162038.1;transl_table=11 DALFDJ020000002.1 tpg gene 114023 114658 . + . ID=gene-O5D79_000470;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=O5D79_000470 DALFDJ020000002.1 Protein Homology CDS 114023 114658 . + 0 ID=cds-HJH9162039.1;Parent=gene-O5D79_000470;Dbxref=NCBI_GP:HJH9162039.1;Name=HJH9162039.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460416.1;locus_tag=O5D79_000470;product=endonuclease III;protein_id=HJH9162039.1;transl_table=11 DALFDJ020000002.1 tpg gene 115260 116765 . + . ID=gene-O5D79_000471;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=O5D79_000471 DALFDJ020000002.1 Protein Homology CDS 115260 116765 . + 0 ID=cds-HJH9162040.1;Parent=gene-O5D79_000471;Dbxref=NCBI_GP:HJH9162040.1;Name=HJH9162040.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460415.1;locus_tag=O5D79_000471;product=dipeptide/tripeptide permease DtpA;protein_id=HJH9162040.1;transl_table=11 DALFDJ020000002.1 tpg gene 116870 117475 . + . ID=gene-O5D79_000472;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=O5D79_000472 DALFDJ020000002.1 Protein Homology CDS 116870 117475 . + 0 ID=cds-HJH9162041.1;Parent=gene-O5D79_000472;Dbxref=NCBI_GP:HJH9162041.1;Name=HJH9162041.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=O5D79_000472;product=glutathione transferase GstA;protein_id=HJH9162041.1;transl_table=11 DALFDJ020000002.1 tpg gene 117534 118394 . - . ID=gene-O5D79_000473;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=O5D79_000473 DALFDJ020000002.1 Protein Homology CDS 117534 118394 . - 0 ID=cds-HJH9162042.1;Parent=gene-O5D79_000473;Dbxref=NCBI_GP:HJH9162042.1;Name=HJH9162042.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460413.1;locus_tag=O5D79_000473;product=pyridoxal kinase PdxY;protein_id=HJH9162042.1;transl_table=11 DALFDJ020000002.1 tpg gene 118454 119728 . - . ID=gene-O5D79_000474;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=O5D79_000474 DALFDJ020000002.1 Protein Homology CDS 118454 119728 . - 0 ID=cds-HJH9162043.1;Parent=gene-O5D79_000474;Dbxref=NCBI_GP:HJH9162043.1;Name=HJH9162043.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=O5D79_000474;product=tyrosine--tRNA ligase;protein_id=HJH9162043.1;transl_table=11 DALFDJ020000002.1 tpg gene 119855 120511 . - . ID=gene-O5D79_000475;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=O5D79_000475 DALFDJ020000002.1 Protein Homology CDS 119855 120511 . - 0 ID=cds-HJH9162044.1;Parent=gene-O5D79_000475;Dbxref=NCBI_GP:HJH9162044.1;Name=HJH9162044.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=O5D79_000475;product=pyridoxamine 5'-phosphate oxidase;protein_id=HJH9162044.1;transl_table=11 DALFDJ020000002.1 tpg gene 120570 120899 . - . ID=gene-O5D79_000476;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=O5D79_000476 DALFDJ020000002.1 Protein Homology CDS 120570 120899 . - 0 ID=cds-HJH9162045.1;Parent=gene-O5D79_000476;Dbxref=NCBI_GP:HJH9162045.1;Name=HJH9162045.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460410.1;locus_tag=O5D79_000476;product=C-type lysozyme inhibitor;protein_id=HJH9162045.1;transl_table=11 DALFDJ020000002.1 tpg gene 120987 122108 . - . ID=gene-O5D79_000477;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=O5D79_000477 DALFDJ020000002.1 Protein Homology CDS 120987 122108 . - 0 ID=cds-HJH9162046.1;Parent=gene-O5D79_000477;Dbxref=NCBI_GP:HJH9162046.1;Name=HJH9162046.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460409.1;locus_tag=O5D79_000477;product=anhydro-N-acetylmuramic acid kinase;protein_id=HJH9162046.1;transl_table=11 DALFDJ020000002.1 tpg gene 122381 122848 . + . ID=gene-O5D79_000478;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=O5D79_000478 DALFDJ020000002.1 Protein Homology CDS 122381 122848 . + 0 ID=cds-HJH9162047.1;Parent=gene-O5D79_000478;Dbxref=NCBI_GP:HJH9162047.1;Name=HJH9162047.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460408.1;locus_tag=O5D79_000478;product=outer membrane lipoprotein SlyB;protein_id=HJH9162047.1;transl_table=11 DALFDJ020000002.1 tpg gene 122895 123335 . - . ID=gene-O5D79_000479;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=O5D79_000479 DALFDJ020000002.1 Protein Homology CDS 122895 123335 . - 0 ID=cds-HJH9162048.1;Parent=gene-O5D79_000479;Dbxref=NCBI_GP:HJH9162048.1;Name=HJH9162048.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=O5D79_000479;product=transcriptional regulator SlyA;protein_id=HJH9162048.1;transl_table=11 DALFDJ020000002.1 tpg gene 123530 123766 . + . ID=gene-O5D79_000480;Name=O5D79_000480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000480 DALFDJ020000002.1 Protein Homology CDS 123530 123766 . + 0 ID=cds-HJH9162049.1;Parent=gene-O5D79_000480;Dbxref=NCBI_GP:HJH9162049.1;Name=HJH9162049.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460406.1;locus_tag=O5D79_000480;product=DUF1656 domain-containing protein;protein_id=HJH9162049.1;transl_table=11 DALFDJ020000002.1 tpg gene 123769 124629 . + . ID=gene-O5D79_000481;Name=O5D79_000481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000481 DALFDJ020000002.1 Protein Homology CDS 123769 124629 . + 0 ID=cds-HJH9162050.1;Parent=gene-O5D79_000481;Dbxref=NCBI_GP:HJH9162050.1;Name=HJH9162050.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218841.1;locus_tag=O5D79_000481;product=efflux RND transporter periplasmic adaptor subunit;protein_id=HJH9162050.1;transl_table=11 DALFDJ020000002.1 tpg gene 124629 126668 . + . ID=gene-O5D79_000482;Name=O5D79_000482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000482 DALFDJ020000002.1 Protein Homology CDS 124629 126668 . + 0 ID=cds-HJH9162051.1;Parent=gene-O5D79_000482;Dbxref=NCBI_GP:HJH9162051.1;Name=HJH9162051.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460404.1;locus_tag=O5D79_000482;product=FUSC family protein;protein_id=HJH9162051.1;transl_table=11 DALFDJ020000002.1 tpg gene 126644 127165 . - . ID=gene-O5D79_000483;Name=sodC2;gbkey=Gene;gene=sodC2;gene_biotype=protein_coding;gene_synonym=sodCII;locus_tag=O5D79_000483 DALFDJ020000002.1 Protein Homology CDS 126644 127165 . - 0 ID=cds-HJH9162052.1;Parent=gene-O5D79_000483;Dbxref=NCBI_GP:HJH9162052.1;Name=HJH9162052.1;gbkey=CDS;gene=sodC2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460403.1;locus_tag=O5D79_000483;product=superoxide dismutase [Cu-Zn] SodC2;protein_id=HJH9162052.1;transl_table=11 DALFDJ020000002.1 tpg gene 127245 128141 . - . ID=gene-O5D79_000484;Name=O5D79_000484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000484 DALFDJ020000002.1 Protein Homology CDS 127245 128141 . - 0 ID=cds-HJH9162053.1;Parent=gene-O5D79_000484;Dbxref=NCBI_GP:HJH9162053.1;Name=HJH9162053.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460402.1;locus_tag=O5D79_000484;product=aldo/keto reductase;protein_id=HJH9162053.1;transl_table=11 DALFDJ020000002.1 tpg gene 128192 128431 . - . ID=gene-O5D79_000485;Name=O5D79_000485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000485 DALFDJ020000002.1 Protein Homology CDS 128192 128431 . - 0 ID=cds-HJH9162054.1;Parent=gene-O5D79_000485;Dbxref=NCBI_GP:HJH9162054.1;Name=HJH9162054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460401.1;locus_tag=O5D79_000485;product=DUF1289 domain-containing protein;protein_id=HJH9162054.1;transl_table=11 DALFDJ020000002.1 tpg gene 128534 129133 . + . ID=gene-O5D79_000486;Name=O5D79_000486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000486 DALFDJ020000002.1 Protein Homology CDS 128534 129133 . + 0 ID=cds-HJH9162055.1;Parent=gene-O5D79_000486;Dbxref=NCBI_GP:HJH9162055.1;Name=HJH9162055.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460400.1;locus_tag=O5D79_000486;product=TetR/AcrR family transcriptional regulator;protein_id=HJH9162055.1;transl_table=11 DALFDJ020000002.1 tpg gene 129192 130289 . + . ID=gene-O5D79_000487;Name=O5D79_000487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000487 DALFDJ020000002.1 Protein Homology CDS 129192 130289 . + 0 ID=cds-HJH9162056.1;Parent=gene-O5D79_000487;Dbxref=NCBI_GP:HJH9162056.1;Name=HJH9162056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460399.1;locus_tag=O5D79_000487;product=alkene reductase;protein_id=HJH9162056.1;transl_table=11 DALFDJ020000002.1 tpg gene 130358 130765 . + . ID=gene-O5D79_000488;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=O5D79_000488 DALFDJ020000002.1 Protein Homology CDS 130358 130765 . + 0 ID=cds-HJH9162057.1;Parent=gene-O5D79_000488;Dbxref=NCBI_GP:HJH9162057.1;Name=HJH9162057.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=O5D79_000488;product=lactoylglutathione lyase;protein_id=HJH9162057.1;transl_table=11 DALFDJ020000002.1 tpg gene 130866 131513 . + . ID=gene-O5D79_000489;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=O5D79_000489 DALFDJ020000002.1 Protein Homology CDS 130866 131513 . + 0 ID=cds-HJH9162058.1;Parent=gene-O5D79_000489;Dbxref=NCBI_GP:HJH9162058.1;Name=HJH9162058.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460397.1;locus_tag=O5D79_000489;product=ribonuclease T;protein_id=HJH9162058.1;transl_table=11 DALFDJ020000002.1 tpg gene 131591 131938 . - . ID=gene-O5D79_000490;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=O5D79_000490 DALFDJ020000002.1 Protein Homology CDS 131591 131938 . - 0 ID=cds-HJH9162059.1;Parent=gene-O5D79_000490;Dbxref=NCBI_GP:HJH9162059.1;Name=HJH9162059.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460396.1;locus_tag=O5D79_000490;product=monothiol glutaredoxin 4;protein_id=HJH9162059.1;transl_table=11 DALFDJ020000002.1 tpg gene 132273 133094 . + . ID=gene-O5D79_000491;Name=O5D79_000491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000491 DALFDJ020000002.1 Protein Homology CDS 132273 133094 . + 0 ID=cds-HJH9162060.1;Parent=gene-O5D79_000491;Dbxref=NCBI_GP:HJH9162060.1;Name=HJH9162060.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310391.1;locus_tag=O5D79_000491;product=C40 family peptidase;protein_id=HJH9162060.1;transl_table=11 DALFDJ020000002.1 tpg gene 133221 133802 . + . ID=gene-O5D79_000492;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=O5D79_000492 DALFDJ020000002.1 Protein Homology CDS 133221 133802 . + 0 ID=cds-HJH9162061.1;Parent=gene-O5D79_000492;Dbxref=NCBI_GP:HJH9162061.1;Name=HJH9162061.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460394.1;locus_tag=O5D79_000492;product=superoxide dismutase [Fe];protein_id=HJH9162061.1;transl_table=11 DALFDJ020000002.1 tpg gene 133885 133974 . - . ID=gene-O5D79_000493;Name=O5D79_000493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000493 DALFDJ020000002.1 Protein Homology CDS 133885 133974 . - 0 ID=cds-HJH9162062.1;Parent=gene-O5D79_000493;Dbxref=NCBI_GP:HJH9162062.1;Name=HJH9162062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=O5D79_000493;product=YnhF family membrane protein;protein_id=HJH9162062.1;transl_table=11 DALFDJ020000002.1 tpg gene 134270 135295 . + . ID=gene-O5D79_000494;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=O5D79_000494 DALFDJ020000002.1 Protein Homology CDS 134270 135295 . + 0 ID=cds-HJH9162063.1;Parent=gene-O5D79_000494;Dbxref=NCBI_GP:HJH9162063.1;Name=HJH9162063.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=O5D79_000494;product=HTH-type transcriptional repressor PurR;protein_id=HJH9162063.1;transl_table=11 DALFDJ020000002.1 tpg gene 135292 136224 . - . ID=gene-O5D79_000495;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=O5D79_000495 DALFDJ020000002.1 Protein Homology CDS 135292 136224 . - 0 ID=cds-HJH9162064.1;Parent=gene-O5D79_000495;Dbxref=NCBI_GP:HJH9162064.1;Name=HJH9162064.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460392.1;locus_tag=O5D79_000495;product=DNA-binding transcriptional activator PunR;protein_id=HJH9162064.1;transl_table=11 DALFDJ020000002.1 tpg gene 136337 137542 . + . ID=gene-O5D79_000496;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;locus_tag=O5D79_000496 DALFDJ020000002.1 Protein Homology CDS 136337 137542 . + 0 ID=cds-HJH9162065.1;Parent=gene-O5D79_000496;Dbxref=NCBI_GP:HJH9162065.1;Name=HJH9162065.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460391.1;locus_tag=O5D79_000496;product=purine nucleoside transporter PunC;protein_id=HJH9162065.1;transl_table=11 DALFDJ020000002.1 tpg gene 137832 138980 . + . ID=gene-O5D79_000497;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=O5D79_000497 DALFDJ020000002.1 Protein Homology CDS 137832 138980 . + 0 ID=cds-HJH9162066.1;Parent=gene-O5D79_000497;Dbxref=NCBI_GP:HJH9162066.1;Name=HJH9162066.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460390.1;locus_tag=O5D79_000497;product=cyclopropane fatty acyl phospholipid synthase;protein_id=HJH9162066.1;transl_table=11 DALFDJ020000002.1 tpg gene 139022 139663 . - . ID=gene-O5D79_000498;Name=O5D79_000498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000498 DALFDJ020000002.1 Protein Homology CDS 139022 139663 . - 0 ID=cds-HJH9162067.1;Parent=gene-O5D79_000498;Dbxref=NCBI_GP:HJH9162067.1;Name=HJH9162067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460389.1;locus_tag=O5D79_000498;product=riboflavin synthase;protein_id=HJH9162067.1;transl_table=11 DALFDJ020000002.1 tpg gene 139880 141253 . + . ID=gene-O5D79_000499;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=O5D79_000499 DALFDJ020000002.1 Protein Homology CDS 139880 141253 . + 0 ID=cds-HJH9162068.1;Parent=gene-O5D79_000499;Dbxref=NCBI_GP:HJH9162068.1;Name=HJH9162068.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460388.2;locus_tag=O5D79_000499;product=multidrug efflux MATE transporter MdtK;protein_id=HJH9162068.1;transl_table=11 DALFDJ020000002.1 tpg gene 141405 141481 . + . ID=gene-O5D79_000500;Name=O5D79_000500;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_000500 DALFDJ020000002.1 tRNAscan-SE tRNA 141405 141481 . + . ID=rna-O5D79_000500;Parent=gene-O5D79_000500;anticodon=(pos:141439..141441);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_000500;product=tRNA-Val DALFDJ020000002.1 tRNAscan-SE exon 141405 141481 . + . ID=exon-O5D79_000500-1;Parent=rna-O5D79_000500;anticodon=(pos:141439..141441);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_000500;product=tRNA-Val DALFDJ020000002.1 tpg gene 141492 141568 . + . ID=gene-O5D79_000501;Name=O5D79_000501;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_000501 DALFDJ020000002.1 tRNAscan-SE tRNA 141492 141568 . + . ID=rna-O5D79_000501;Parent=gene-O5D79_000501;anticodon=(pos:141526..141528);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_000501;product=tRNA-Val DALFDJ020000002.1 tRNAscan-SE exon 141492 141568 . + . ID=exon-O5D79_000501-1;Parent=rna-O5D79_000501;anticodon=(pos:141526..141528);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_000501;product=tRNA-Val DALFDJ020000002.1 tpg gene 141726 142784 . - . ID=gene-O5D79_000502;Name=ssaU;gbkey=Gene;gene=ssaU;gene_biotype=protein_coding;locus_tag=O5D79_000502 DALFDJ020000002.1 Protein Homology CDS 141726 142784 . - 0 ID=cds-HJH9162069.1;Parent=gene-O5D79_000502;Dbxref=NCBI_GP:HJH9162069.1;Name=HJH9162069.1;gbkey=CDS;gene=ssaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460387.1;locus_tag=O5D79_000502;product=SPI-2 type III secretion system apparatus protein SsaU;protein_id=HJH9162069.1;transl_table=11 DALFDJ020000002.1 tpg gene 142781 143560 . - . ID=gene-O5D79_000503;Name=ssaT;gbkey=Gene;gene=ssaT;gene_biotype=protein_coding;locus_tag=O5D79_000503 DALFDJ020000002.1 Protein Homology CDS 142781 143560 . - 0 ID=cds-HJH9162070.1;Parent=gene-O5D79_000503;Dbxref=NCBI_GP:HJH9162070.1;Name=HJH9162070.1;gbkey=CDS;gene=ssaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460386.1;locus_tag=O5D79_000503;product=SPI-2 type III secretion system apparatus protein SsaT;protein_id=HJH9162070.1;transl_table=11 DALFDJ020000002.1 tpg gene 143561 143827 . - . ID=gene-O5D79_000504;Name=ssas;gbkey=Gene;gene=ssas;gene_biotype=protein_coding;locus_tag=O5D79_000504 DALFDJ020000002.1 Protein Homology CDS 143561 143827 . - 0 ID=cds-HJH9162071.1;Parent=gene-O5D79_000504;Dbxref=NCBI_GP:HJH9162071.1;Name=HJH9162071.1;gbkey=CDS;gene=ssas;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460385.1;locus_tag=O5D79_000504;product=SPI-2 type III secretion system apparatus protein SsaS;protein_id=HJH9162071.1;transl_table=11 DALFDJ020000002.1 tpg gene 143824 144471 . - . ID=gene-O5D79_000505;Name=ssaR;gbkey=Gene;gene=ssaR;gene_biotype=protein_coding;locus_tag=O5D79_000505 DALFDJ020000002.1 Protein Homology CDS 143824 144471 . - 0 ID=cds-HJH9162072.1;Parent=gene-O5D79_000505;Dbxref=NCBI_GP:HJH9162072.1;Name=HJH9162072.1;gbkey=CDS;gene=ssaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460384.1;locus_tag=O5D79_000505;product=SPI-2 type III secretion system export apparatus protein SsaR;protein_id=HJH9162072.1;transl_table=11 DALFDJ020000002.1 tpg gene 144539 145507 . - . ID=gene-O5D79_000506;Name=ssaQ;gbkey=Gene;gene=ssaQ;gene_biotype=protein_coding;locus_tag=O5D79_000506 DALFDJ020000002.1 Protein Homology CDS 144539 145507 . - 0 ID=cds-HJH9162073.1;Parent=gene-O5D79_000506;Dbxref=NCBI_GP:HJH9162073.1;Name=HJH9162073.1;gbkey=CDS;gene=ssaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460383.1;locus_tag=O5D79_000506;product=SPI-2 type III secretion system cytoplasmic ring protein SsaQ;protein_id=HJH9162073.1;transl_table=11 DALFDJ020000002.1 tpg gene 145488 145862 . - . ID=gene-O5D79_000507;Name=ssaP;gbkey=Gene;gene=ssaP;gene_biotype=protein_coding;locus_tag=O5D79_000507 DALFDJ020000002.1 Protein Homology CDS 145488 145862 . - 0 ID=cds-HJH9162074.1;Parent=gene-O5D79_000507;Dbxref=NCBI_GP:HJH9162074.1;Name=HJH9162074.1;gbkey=CDS;gene=ssaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460382.1;locus_tag=O5D79_000507;product=SPI-2 type III secretion system apparatus protein SsaP;protein_id=HJH9162074.1;transl_table=11 DALFDJ020000002.1 tpg gene 145843 146220 . - . ID=gene-O5D79_000508;Name=ssaO;gbkey=Gene;gene=ssaO;gene_biotype=protein_coding;locus_tag=O5D79_000508 DALFDJ020000002.1 Protein Homology CDS 145843 146220 . - 0 ID=cds-HJH9162075.1;Parent=gene-O5D79_000508;Dbxref=NCBI_GP:HJH9162075.1;Name=HJH9162075.1;gbkey=CDS;gene=ssaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460381.1;locus_tag=O5D79_000508;product=SPI-2 type III secretion system apparatus protein SsaO;protein_id=HJH9162075.1;transl_table=11 DALFDJ020000002.1 tpg gene 146223 147524 . - . ID=gene-O5D79_000509;Name=ssaN;gbkey=Gene;gene=ssaN;gene_biotype=protein_coding;locus_tag=O5D79_000509 DALFDJ020000002.1 Protein Homology CDS 146223 147524 . - 0 ID=cds-HJH9162076.1;Parent=gene-O5D79_000509;Dbxref=NCBI_GP:HJH9162076.1;Name=HJH9162076.1;gbkey=CDS;gene=ssaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460380.1;locus_tag=O5D79_000509;product=SctN family type III secretion system ATPase SsaN;protein_id=HJH9162076.1;transl_table=11 DALFDJ020000002.1 tpg gene 147514 149559 . - . ID=gene-O5D79_000510;Name=ssaV;gbkey=Gene;gene=ssaV;gene_biotype=protein_coding;locus_tag=O5D79_000510 DALFDJ020000002.1 Protein Homology CDS 147514 149559 . - 0 ID=cds-HJH9162077.1;Parent=gene-O5D79_000510;Dbxref=NCBI_GP:HJH9162077.1;Name=HJH9162077.1;gbkey=CDS;gene=ssaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460379.1;locus_tag=O5D79_000510;product=SPI-2 type III secretion system apparatus protein SsaV;protein_id=HJH9162077.1;transl_table=11 DALFDJ020000002.1 tpg gene 149544 149912 . - . ID=gene-O5D79_000511;Name=ssaM;gbkey=Gene;gene=ssaM;gene_biotype=protein_coding;locus_tag=O5D79_000511 DALFDJ020000002.1 Protein Homology CDS 149544 149912 . - 0 ID=cds-HJH9162078.1;Parent=gene-O5D79_000511;Dbxref=NCBI_GP:HJH9162078.1;Name=HJH9162078.1;gbkey=CDS;gene=ssaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460378.1;locus_tag=O5D79_000511;product=SPI-2 type III secretion system apparatus protein SsaM;protein_id=HJH9162078.1;transl_table=11 DALFDJ020000002.1 tpg gene 149970 150986 . - . ID=gene-O5D79_000512;Name=ssaL;gbkey=Gene;gene=ssaL;gene_biotype=protein_coding;locus_tag=O5D79_000512 DALFDJ020000002.1 Protein Homology CDS 149970 150986 . - 0 ID=cds-HJH9162079.1;Parent=gene-O5D79_000512;Dbxref=NCBI_GP:HJH9162079.1;Name=HJH9162079.1;gbkey=CDS;gene=ssaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460377.1;locus_tag=O5D79_000512;product=SPI-2 type III secretion system apparatus protein SsaL;protein_id=HJH9162079.1;transl_table=11 DALFDJ020000002.1 tpg gene 150952 151626 . - . ID=gene-O5D79_000513;Name=ssaK;gbkey=Gene;gene=ssaK;gene_biotype=protein_coding;locus_tag=O5D79_000513 DALFDJ020000002.1 Protein Homology CDS 150952 151626 . - 0 ID=cds-HJH9162080.1;Parent=gene-O5D79_000513;Dbxref=NCBI_GP:HJH9162080.1;Name=HJH9162080.1;gbkey=CDS;gene=ssaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460376.1;locus_tag=O5D79_000513;product=SPI-2 type III secretion system apparatus protein SsaK;protein_id=HJH9162080.1;transl_table=11 DALFDJ020000002.1 tpg gene 151623 152171 . - . ID=gene-O5D79_000514;Name=O5D79_000514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000514 DALFDJ020000002.1 Protein Homology CDS 151623 152171 . - 0 ID=cds-HJH9162081.1;Parent=gene-O5D79_000514;Dbxref=NCBI_GP:HJH9162081.1;Name=HJH9162081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460375.1;locus_tag=O5D79_000514;product=type III secretion system domain-containing protein;protein_id=HJH9162081.1;transl_table=11 DALFDJ020000002.1 tpg gene 152189 152938 . - . ID=gene-O5D79_000515;Name=ssaJ;gbkey=Gene;gene=ssaJ;gene_biotype=protein_coding;locus_tag=O5D79_000515 DALFDJ020000002.1 Protein Homology CDS 152189 152938 . - 0 ID=cds-HJH9162082.1;Parent=gene-O5D79_000515;Dbxref=NCBI_GP:HJH9162082.1;Name=HJH9162082.1;gbkey=CDS;gene=ssaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460374.1;locus_tag=O5D79_000515;product=SPI-2 type III secretion system apparatus lipoprotein SsaJ;protein_id=HJH9162082.1;transl_table=11 DALFDJ020000002.1 tpg gene 152935 153183 . - . ID=gene-O5D79_000516;Name=ssaI;gbkey=Gene;gene=ssaI;gene_biotype=protein_coding;locus_tag=O5D79_000516 DALFDJ020000002.1 Protein Homology CDS 152935 153183 . - 0 ID=cds-HJH9162083.1;Parent=gene-O5D79_000516;Dbxref=NCBI_GP:HJH9162083.1;Name=HJH9162083.1;gbkey=CDS;gene=ssaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562742.1;locus_tag=O5D79_000516;product=SctI family type III secretion system inner rod subunit SsaI;protein_id=HJH9162083.1;transl_table=11 DALFDJ020000002.1 tpg gene 153195 153485 . - . ID=gene-O5D79_000517;Name=O5D79_000517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000517 DALFDJ020000002.1 Protein Homology CDS 153195 153485 . - 0 ID=cds-HJH9162084.1;Parent=gene-O5D79_000517;Dbxref=NCBI_GP:HJH9162084.1;Name=HJH9162084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531123.1;locus_tag=O5D79_000517;product=EscG/YscG/SsaH family type III secretion system needle protein co-chaperone;protein_id=HJH9162084.1;transl_table=11 DALFDJ020000002.1 tpg gene 153463 153678 . - . ID=gene-O5D79_000518;Name=ssaG;gbkey=Gene;gene=ssaG;gene_biotype=protein_coding;locus_tag=O5D79_000518 DALFDJ020000002.1 Protein Homology CDS 153463 153678 . - 0 ID=cds-HJH9162085.1;Parent=gene-O5D79_000518;Dbxref=NCBI_GP:HJH9162085.1;Name=HJH9162085.1;gbkey=CDS;gene=ssaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460371.1;locus_tag=O5D79_000518;product=type III secretion system needle filament protein SsaG;protein_id=HJH9162085.1;transl_table=11 DALFDJ020000002.1 tpg gene 153772 154461 . - . ID=gene-O5D79_000519;Name=sseG;gbkey=Gene;gene=sseG;gene_biotype=protein_coding;locus_tag=O5D79_000519 DALFDJ020000002.1 Protein Homology CDS 153772 154461 . - 0 ID=cds-HJH9162086.1;Parent=gene-O5D79_000519;Dbxref=NCBI_GP:HJH9162086.1;Name=HJH9162086.1;Note=SseG%2C from Salmonella pathogenicity island 2%2C is a type III secretion system (T3SS) effector protein.;gbkey=CDS;gene=sseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460370.1;locus_tag=O5D79_000519;product=pathogenicity island 2 effector protein SseG;protein_id=HJH9162086.1;transl_table=11 DALFDJ020000002.1 tpg gene 154458 155240 . - . ID=gene-O5D79_000520;Name=sseF;gbkey=Gene;gene=sseF;gene_biotype=protein_coding;locus_tag=O5D79_000520 DALFDJ020000002.1 Protein Homology CDS 154458 155240 . - 0 ID=cds-HJH9162087.1;Parent=gene-O5D79_000520;Dbxref=NCBI_GP:HJH9162087.1;Name=HJH9162087.1;gbkey=CDS;gene=sseF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460369.1;locus_tag=O5D79_000520;product=type III secretion systems effector SseF;protein_id=HJH9162087.1;transl_table=11 DALFDJ020000002.1 tpg gene 155256 155690 . - . ID=gene-O5D79_000521;Name=sscB;gbkey=Gene;gene=sscB;gene_biotype=protein_coding;locus_tag=O5D79_000521 DALFDJ020000002.1 Protein Homology CDS 155256 155690 . - 0 ID=cds-HJH9162088.1;Parent=gene-O5D79_000521;Dbxref=NCBI_GP:HJH9162088.1;Name=HJH9162088.1;gbkey=CDS;gene=sscB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460368.1;locus_tag=O5D79_000521;product=SycD/LcrH family type III secretion system chaperone SscB;protein_id=HJH9162088.1;transl_table=11 DALFDJ020000002.1 tpg gene 155742 156158 . - . ID=gene-O5D79_000522;Name=sseE;gbkey=Gene;gene=sseE;gene_biotype=protein_coding;locus_tag=O5D79_000522 DALFDJ020000002.1 Protein Homology CDS 155742 156158 . - 0 ID=cds-HJH9162089.1;Parent=gene-O5D79_000522;Dbxref=NCBI_GP:HJH9162089.1;Name=HJH9162089.1;gbkey=CDS;gene=sseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460367.1;locus_tag=O5D79_000522;product=LcrR family type III secretion system chaperone SseE;protein_id=HJH9162089.1;transl_table=11 DALFDJ020000002.1 tpg gene 156161 156748 . - . ID=gene-O5D79_000523;Name=sseD;gbkey=Gene;gene=sseD;gene_biotype=protein_coding;locus_tag=O5D79_000523 DALFDJ020000002.1 Protein Homology CDS 156161 156748 . - 0 ID=cds-HJH9162090.1;Parent=gene-O5D79_000523;Dbxref=NCBI_GP:HJH9162090.1;Name=HJH9162090.1;gbkey=CDS;gene=sseD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460366.1;locus_tag=O5D79_000523;product=SPI-2 type III secretion system translocon protein SseD;protein_id=HJH9162090.1;transl_table=11 DALFDJ020000002.1 tpg gene 156764 158218 . - . ID=gene-O5D79_000524;Name=O5D79_000524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000524 DALFDJ020000002.1 Protein Homology CDS 156764 158218 . - 0 ID=cds-HJH9162091.1;Parent=gene-O5D79_000524;Dbxref=NCBI_GP:HJH9162091.1;Name=HJH9162091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460365.1;locus_tag=O5D79_000524;product=type III secretion system translocon protein;protein_id=HJH9162091.1;transl_table=11 DALFDJ020000002.1 tpg gene 158221 158694 . - . ID=gene-O5D79_000525;Name=sscA;gbkey=Gene;gene=sscA;gene_biotype=protein_coding;locus_tag=O5D79_000525 DALFDJ020000002.1 Protein Homology CDS 158221 158694 . - 0 ID=cds-HJH9162092.1;Parent=gene-O5D79_000525;Dbxref=NCBI_GP:HJH9162092.1;Name=HJH9162092.1;gbkey=CDS;gene=sscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460364.1;locus_tag=O5D79_000525;product=SycD/LcrH family type III secretion system chaperone SscA;protein_id=HJH9162092.1;transl_table=11 DALFDJ020000002.1 tpg gene 158691 159281 . - . ID=gene-O5D79_000526;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=O5D79_000526 DALFDJ020000002.1 Protein Homology CDS 158691 159281 . - 0 ID=cds-HJH9162093.1;Parent=gene-O5D79_000526;Dbxref=NCBI_GP:HJH9162093.1;Name=HJH9162093.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460363.1;locus_tag=O5D79_000526;product=SPI-2 type III secretion system translocon protein SseB;protein_id=HJH9162093.1;transl_table=11 DALFDJ020000002.1 tpg gene 159288 159614 . - . ID=gene-O5D79_000527;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=O5D79_000527 DALFDJ020000002.1 Protein Homology CDS 159288 159614 . - 0 ID=cds-HJH9162094.1;Parent=gene-O5D79_000527;Dbxref=NCBI_GP:HJH9162094.1;Name=HJH9162094.1;gbkey=CDS;gene=sseA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460362.1;locus_tag=O5D79_000527;product=SPI-2 type III secretion system chaperone SseA;protein_id=HJH9162094.1;transl_table=11 DALFDJ020000002.1 tpg gene 159877 160119 . - . ID=gene-O5D79_000528;Name=ssaE;gbkey=Gene;gene=ssaE;gene_biotype=protein_coding;locus_tag=O5D79_000528 DALFDJ020000002.1 Protein Homology CDS 159877 160119 . - 0 ID=cds-HJH9162095.1;Parent=gene-O5D79_000528;Dbxref=NCBI_GP:HJH9162095.1;Name=HJH9162095.1;gbkey=CDS;gene=ssaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460361.1;locus_tag=O5D79_000528;product=YscE family type III secretion system co-chaperone SsaE;protein_id=HJH9162095.1;transl_table=11 DALFDJ020000002.1 tpg gene 160127 161338 . - . ID=gene-O5D79_000529;Name=ssaD;gbkey=Gene;gene=ssaD;gene_biotype=protein_coding;locus_tag=O5D79_000529 DALFDJ020000002.1 Protein Homology CDS 160127 161338 . - 0 ID=cds-HJH9162096.1;Parent=gene-O5D79_000529;Dbxref=NCBI_GP:HJH9162096.1;Name=HJH9162096.1;gbkey=CDS;gene=ssaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460360.1;locus_tag=O5D79_000529;product=SctD family type III secretion system inner membrane ring subunit SsaD;protein_id=HJH9162096.1;transl_table=11 DALFDJ020000002.1 tpg gene 161319 162812 . - . ID=gene-O5D79_000530;Name=spiA;gbkey=Gene;gene=spiA;gene_biotype=protein_coding;locus_tag=O5D79_000530 DALFDJ020000002.1 Protein Homology CDS 161319 162812 . - 0 ID=cds-HJH9162097.1;Parent=gene-O5D79_000530;Dbxref=NCBI_GP:HJH9162097.1;Name=HJH9162097.1;gbkey=CDS;gene=spiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460359.1;locus_tag=O5D79_000530;product=SPI-2 type III secretion system protein SpiA;protein_id=HJH9162097.1;transl_table=11 DALFDJ020000002.1 tpg gene 162814 163215 . - . ID=gene-O5D79_000531;Name=spiC;gbkey=Gene;gene=spiC;gene_biotype=protein_coding;locus_tag=O5D79_000531 DALFDJ020000002.1 Protein Homology CDS 162814 163215 . - 0 ID=cds-HJH9162098.1;Parent=gene-O5D79_000531;Dbxref=NCBI_GP:HJH9162098.1;Name=HJH9162098.1;gbkey=CDS;gene=spiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460358.1;locus_tag=O5D79_000531;product=SPI-2 type III secretion system protein SpiC;protein_id=HJH9162098.1;transl_table=11 DALFDJ020000002.1 tpg gene 163616 166378 . + . ID=gene-O5D79_000532;Name=O5D79_000532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000532 DALFDJ020000002.1 Protein Homology CDS 163616 166378 . + 0 ID=cds-HJH9162099.1;Parent=gene-O5D79_000532;Dbxref=NCBI_GP:HJH9162099.1;Name=HJH9162099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460357.1;locus_tag=O5D79_000532;product=two component system sensor kinase;protein_id=HJH9162099.1;transl_table=11 DALFDJ020000002.1 tpg gene 166409 167047 . + . ID=gene-O5D79_000533;Name=O5D79_000533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000533 DALFDJ020000002.1 Protein Homology CDS 166409 167047 . + 0 ID=cds-HJH9162100.1;Parent=gene-O5D79_000533;Dbxref=NCBI_GP:HJH9162100.1;Name=HJH9162100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460356.1;locus_tag=O5D79_000533;product=two component system response regulator;protein_id=HJH9162100.1;transl_table=11 DALFDJ020000002.1 tpg gene 167226 167954 . + . ID=gene-O5D79_000534;Name=O5D79_000534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000534 DALFDJ020000002.1 Protein Homology CDS 167226 167954 . + 0 ID=cds-HJH9162101.1;Parent=gene-O5D79_000534;Dbxref=NCBI_GP:HJH9162101.1;Name=HJH9162101.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460355.1;locus_tag=O5D79_000534;product=MerR family transcriptional regulator;protein_id=HJH9162101.1;transl_table=11 DALFDJ020000002.1 tpg gene 168126 169085 . + . ID=gene-O5D79_000535;Name=mlrB;gbkey=Gene;gene=mlrB;gene_biotype=protein_coding;locus_tag=O5D79_000535 DALFDJ020000002.1 Protein Homology CDS 168126 169085 . + 0 ID=cds-HJH9162102.1;Parent=gene-O5D79_000535;Dbxref=NCBI_GP:HJH9162102.1;Name=HJH9162102.1;gbkey=CDS;gene=mlrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460354.1;locus_tag=O5D79_000535;product=transcriptional regulator MlrB;protein_id=HJH9162102.1;transl_table=11 DALFDJ020000002.1 tpg gene 169181 169393 . - . ID=gene-O5D79_000536;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=O5D79_000536 DALFDJ020000002.1 Protein Homology CDS 169181 169393 . - 0 ID=cds-HJH9162103.1;Parent=gene-O5D79_000536;Dbxref=NCBI_GP:HJH9162103.1;Name=HJH9162103.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460353.1;locus_tag=O5D79_000536;product=fumarate hydratase FumD;protein_id=HJH9162103.1;transl_table=11 DALFDJ020000002.1 tpg gene 169491 170111 . - . ID=gene-O5D79_000537;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=O5D79_000537 DALFDJ020000002.1 Protein Homology CDS 169491 170111 . - 0 ID=cds-HJH9162104.1;Parent=gene-O5D79_000537;Dbxref=NCBI_GP:HJH9162104.1;Name=HJH9162104.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460352.3;locus_tag=O5D79_000537;product=tetrathionate respiration response regulator TtrR;protein_id=HJH9162104.1;transl_table=11 DALFDJ020000002.1 tpg gene 170086 171864 . - . ID=gene-O5D79_000538;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=O5D79_000538 DALFDJ020000002.1 Protein Homology CDS 170086 171864 . - 0 ID=cds-HJH9162105.1;Parent=gene-O5D79_000538;Dbxref=NCBI_GP:HJH9162105.1;Name=HJH9162105.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460351.1;locus_tag=O5D79_000538;product=tetrathionate respiration histidine kinase TtrS;protein_id=HJH9162105.1;transl_table=11 DALFDJ020000002.1 tpg gene 172046 172780 . + . ID=gene-O5D79_000539;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=protein_coding;locus_tag=O5D79_000539 DALFDJ020000002.1 Protein Homology CDS 172046 172780 . + 0 ID=cds-HJH9162106.1;Parent=gene-O5D79_000539;Dbxref=NCBI_GP:HJH9162106.1;Name=HJH9162106.1;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518945.1;locus_tag=O5D79_000539;product=tetrathionate reductase subunit TtrB;protein_id=HJH9162106.1;transl_table=11 DALFDJ020000002.1 tpg gene 172781 173803 . + . ID=gene-O5D79_000540;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=protein_coding;locus_tag=O5D79_000540 DALFDJ020000002.1 Protein Homology CDS 172781 173803 . + 0 ID=cds-HJH9162107.1;Parent=gene-O5D79_000540;Dbxref=NCBI_GP:HJH9162107.1;Name=HJH9162107.1;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460349.1;locus_tag=O5D79_000540;product=tetrathionate reductase subunit TtrC;protein_id=HJH9162107.1;transl_table=11 DALFDJ020000002.1 tpg gene 173796 176858 . + . ID=gene-O5D79_000541;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=O5D79_000541 DALFDJ020000002.1 Protein Homology CDS 173796 176858 . + 0 ID=cds-HJH9162108.1;Parent=gene-O5D79_000541;Dbxref=NCBI_GP:HJH9162108.1;Name=HJH9162108.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;gene=ttrA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460348.1;locus_tag=O5D79_000541;product=tetrathionate reductase subunit TtrA;protein_id=HJH9162108.1;transl_table=11 DALFDJ020000002.1 tpg gene 177181 178407 . + . ID=gene-O5D79_000542;Name=O5D79_000542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000542 DALFDJ020000002.1 Protein Homology CDS 177181 178407 . + 0 ID=cds-HJH9162109.1;Parent=gene-O5D79_000542;Dbxref=NCBI_GP:HJH9162109.1;Name=HJH9162109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460347.1;locus_tag=O5D79_000542;product=PfkB family carbohydrate kinase;protein_id=HJH9162109.1;transl_table=11 DALFDJ020000002.1 tpg gene 178419 179156 . + . ID=gene-O5D79_000543;Name=O5D79_000543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000543 DALFDJ020000002.1 Protein Homology CDS 178419 179156 . + 0 ID=cds-HJH9162110.1;Parent=gene-O5D79_000543;Dbxref=NCBI_GP:HJH9162110.1;Name=HJH9162110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460346.1;locus_tag=O5D79_000543;product=glutamine amidotransferase;protein_id=HJH9162110.1;transl_table=11 DALFDJ020000002.1 tpg gene 179214 180107 . + . ID=gene-O5D79_000544;Name=O5D79_000544;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000544 DALFDJ020000002.1 Protein Homology CDS 179214 180107 . + 0 ID=cds-HJH9162111.1;Parent=gene-O5D79_000544;Dbxref=NCBI_GP:HJH9162111.1;Name=HJH9162111.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460345.1;locus_tag=O5D79_000544;product=proline iminopeptidase-family hydrolase;protein_id=HJH9162111.1;transl_table=11 DALFDJ020000002.1 tpg gene 180129 181472 . + . ID=gene-O5D79_000545;Name=O5D79_000545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000545 DALFDJ020000002.1 Protein Homology CDS 180129 181472 . + 0 ID=cds-HJH9162112.1;Parent=gene-O5D79_000545;Dbxref=NCBI_GP:HJH9162112.1;Name=HJH9162112.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460344.1;locus_tag=O5D79_000545;product=APC family permease;protein_id=HJH9162112.1;transl_table=11 DALFDJ020000002.1 tpg gene 181636 181866 . + . ID=gene-O5D79_000546;Name=O5D79_000546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000546 DALFDJ020000002.1 Protein Homology CDS 181636 181866 . + 0 ID=cds-HJH9162113.1;Parent=gene-O5D79_000546;Dbxref=NCBI_GP:HJH9162113.1;Name=HJH9162113.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049534.1;locus_tag=O5D79_000546;product=hypothetical protein;protein_id=HJH9162113.1;transl_table=11 DALFDJ020000002.1 tpg gene 181874 183286 . + . ID=gene-O5D79_000547;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=O5D79_000547 DALFDJ020000002.1 Protein Homology CDS 181874 183286 . + 0 ID=cds-HJH9162114.1;Parent=gene-O5D79_000547;Dbxref=NCBI_GP:HJH9162114.1;Name=HJH9162114.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=O5D79_000547;product=pyruvate kinase PykF;protein_id=HJH9162114.1;transl_table=11 DALFDJ020000002.1 tpg gene 183597 183833 . + . ID=gene-O5D79_000548;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=O5D79_000548 DALFDJ020000002.1 Protein Homology CDS 183597 183833 . + 0 ID=cds-HJH9162115.1;Parent=gene-O5D79_000548;Dbxref=NCBI_GP:HJH9162115.1;Name=HJH9162115.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=O5D79_000548;product=murein lipoprotein Lpp;protein_id=HJH9162115.1;transl_table=11 DALFDJ020000002.1 tpg gene 183916 184155 . + . ID=gene-O5D79_000549;Name=O5D79_000549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000549 DALFDJ020000002.1 Protein Homology CDS 183916 184155 . + 0 ID=cds-HJH9162116.1;Parent=gene-O5D79_000549;Dbxref=NCBI_GP:HJH9162116.1;Name=HJH9162116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460341.1;locus_tag=O5D79_000549;product=major outer membrane lipoprotein;protein_id=HJH9162116.1;transl_table=11 DALFDJ020000002.1 tpg gene 184222 185223 . - . ID=gene-O5D79_000550;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=O5D79_000550 DALFDJ020000002.1 Protein Homology CDS 184222 185223 . - 0 ID=cds-HJH9162117.1;Parent=gene-O5D79_000550;Dbxref=NCBI_GP:HJH9162117.1;Name=HJH9162117.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460340.1;locus_tag=O5D79_000550;product=L%2CD-transpeptidase LdtE;protein_id=HJH9162117.1;transl_table=11 DALFDJ020000002.1 tpg gene 185378 185794 . - . ID=gene-O5D79_000551;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=O5D79_000551 DALFDJ020000002.1 Protein Homology CDS 185378 185794 . - 0 ID=cds-HJH9162118.1;Parent=gene-O5D79_000551;Dbxref=NCBI_GP:HJH9162118.1;Name=HJH9162118.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460339.1;locus_tag=O5D79_000551;product=cysteine desulfuration protein SufE;protein_id=HJH9162118.1;transl_table=11 DALFDJ020000002.1 tpg gene 185807 187027 . - . ID=gene-O5D79_000552;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=O5D79_000552 DALFDJ020000002.1 Protein Homology CDS 185807 187027 . - 0 ID=cds-HJH9162119.1;Parent=gene-O5D79_000552;Dbxref=NCBI_GP:HJH9162119.1;Name=HJH9162119.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460338.1;locus_tag=O5D79_000552;product=cysteine desulfurase SufS;protein_id=HJH9162119.1;transl_table=11 DALFDJ020000002.1 tpg gene 187024 188295 . - . ID=gene-O5D79_000553;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=O5D79_000553 DALFDJ020000002.1 Protein Homology CDS 187024 188295 . - 0 ID=cds-HJH9162120.1;Parent=gene-O5D79_000553;Dbxref=NCBI_GP:HJH9162120.1;Name=HJH9162120.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460337.1;locus_tag=O5D79_000553;product=Fe-S cluster assembly protein SufD;protein_id=HJH9162120.1;transl_table=11 DALFDJ020000002.1 tpg gene 188270 189016 . - . ID=gene-O5D79_000554;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=O5D79_000554 DALFDJ020000002.1 Protein Homology CDS 188270 189016 . - 0 ID=cds-HJH9162121.1;Parent=gene-O5D79_000554;Dbxref=NCBI_GP:HJH9162121.1;Name=HJH9162121.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=O5D79_000554;product=Fe-S cluster assembly ATPase SufC;protein_id=HJH9162121.1;transl_table=11 DALFDJ020000002.1 tpg gene 189033 190520 . - . ID=gene-O5D79_000555;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=O5D79_000555 DALFDJ020000002.1 Protein Homology CDS 189033 190520 . - 0 ID=cds-HJH9162122.1;Parent=gene-O5D79_000555;Dbxref=NCBI_GP:HJH9162122.1;Name=HJH9162122.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460335.1;locus_tag=O5D79_000555;product=Fe-S cluster assembly protein SufB;protein_id=HJH9162122.1;transl_table=11 DALFDJ020000002.1 tpg gene 190529 190897 . - . ID=gene-O5D79_000556;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=O5D79_000556 DALFDJ020000002.1 Protein Homology CDS 190529 190897 . - 0 ID=cds-HJH9162123.1;Parent=gene-O5D79_000556;Dbxref=NCBI_GP:HJH9162123.1;Name=HJH9162123.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460334.1;locus_tag=O5D79_000556;product=Fe-S cluster assembly scaffold SufA;protein_id=HJH9162123.1;transl_table=11 DALFDJ020000002.1 tpg gene 191324 192670 . + . ID=gene-O5D79_000557;Name=O5D79_000557;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000557 DALFDJ020000002.1 Protein Homology CDS 191324 192670 . + 0 ID=cds-HJH9162124.1;Parent=gene-O5D79_000557;Dbxref=NCBI_GP:HJH9162124.1;Name=HJH9162124.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460333.1;locus_tag=O5D79_000557;product=cation:dicarboxylate symporter family transporter;protein_id=HJH9162124.1;transl_table=11 DALFDJ020000002.1 tpg gene 192958 193146 . - . ID=gene-O5D79_000558;Name=O5D79_000558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000558 DALFDJ020000002.1 Protein Homology CDS 192958 193146 . - 0 ID=cds-HJH9162125.1;Parent=gene-O5D79_000558;Dbxref=NCBI_GP:HJH9162125.1;Name=HJH9162125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=O5D79_000558;product=YdiH family protein;protein_id=HJH9162125.1;transl_table=11 DALFDJ020000002.1 tpg gene 193245 193655 . - . ID=gene-O5D79_000559;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=O5D79_000559 DALFDJ020000002.1 Protein Homology CDS 193245 193655 . - 0 ID=cds-HJH9162126.1;Parent=gene-O5D79_000559;Dbxref=NCBI_GP:HJH9162126.1;Name=HJH9162126.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=O5D79_000559;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=HJH9162126.1;transl_table=11 DALFDJ020000002.1 tpg gene 193652 196708 . - . ID=gene-O5D79_000560;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=O5D79_000560 DALFDJ020000002.1 Protein Homology CDS 193652 196708 . - 0 ID=cds-HJH9162127.1;Parent=gene-O5D79_000560;Dbxref=NCBI_GP:HJH9162127.1;Name=HJH9162127.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460330.1;locus_tag=O5D79_000560;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=HJH9162127.1;transl_table=11 DALFDJ020000002.1 tpg gene 196973 198091 . + . ID=gene-O5D79_000561;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=O5D79_000561 DALFDJ020000002.1 Protein Homology CDS 196973 198091 . + 0 ID=cds-HJH9162128.1;Parent=gene-O5D79_000561;Dbxref=NCBI_GP:HJH9162128.1;Name=HJH9162128.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460329.1;locus_tag=O5D79_000561;product=AI-2E family transporter YdiK;protein_id=HJH9162128.1;transl_table=11 DALFDJ020000002.1 tpg gene 198274 198381 . + . ID=gene-O5D79_000562;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=O5D79_000562 DALFDJ020000002.1 cmsearch antisense_RNA 198274 198381 . + . ID=rna-O5D79_000562;Parent=gene-O5D79_000562;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_000562;product=antisense sRNA RprA DALFDJ020000002.1 cmsearch exon 198274 198381 . + . ID=exon-O5D79_000562-1;Parent=rna-O5D79_000562;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_000562;product=antisense sRNA RprA DALFDJ020000002.1 tpg gene 198549 198908 . + . ID=gene-O5D79_000563;Name=O5D79_000563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000563 DALFDJ020000002.1 Protein Homology CDS 198549 198908 . + 0 ID=cds-HJH9162129.1;Parent=gene-O5D79_000563;Dbxref=NCBI_GP:HJH9162129.1;Name=HJH9162129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460328.1;locus_tag=O5D79_000563;product=YdiL family protein;protein_id=HJH9162129.1;transl_table=11 DALFDJ020000002.1 tpg gene 199049 200260 . + . ID=gene-O5D79_000564;Name=O5D79_000564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000564 DALFDJ020000002.1 Protein Homology CDS 199049 200260 . + 0 ID=cds-HJH9162130.1;Parent=gene-O5D79_000564;Dbxref=NCBI_GP:HJH9162130.1;Name=HJH9162130.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460327.1;locus_tag=O5D79_000564;product=MFS transporter;protein_id=HJH9162130.1;transl_table=11 DALFDJ020000002.1 tpg gene 200624 201859 . + . ID=gene-O5D79_000565;Name=O5D79_000565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000565 DALFDJ020000002.1 Protein Homology CDS 200624 201859 . + 0 ID=cds-HJH9162131.1;Parent=gene-O5D79_000565;Dbxref=NCBI_GP:HJH9162131.1;Name=HJH9162131.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460326.1;locus_tag=O5D79_000565;product=MFS transporter;protein_id=HJH9162131.1;transl_table=11 DALFDJ020000002.1 tpg gene 201926 202792 . + . ID=gene-O5D79_000566;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=O5D79_000566 DALFDJ020000002.1 Protein Homology CDS 201926 202792 . + 0 ID=cds-HJH9162132.1;Parent=gene-O5D79_000566;Dbxref=NCBI_GP:HJH9162132.1;Name=HJH9162132.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460325.1;locus_tag=O5D79_000566;product=quinate/shikimate dehydrogenase;protein_id=HJH9162132.1;transl_table=11 DALFDJ020000002.1 tpg gene 202837 203595 . + . ID=gene-O5D79_000567;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=O5D79_000567 DALFDJ020000002.1 Protein Homology CDS 202837 203595 . + 0 ID=cds-HJH9162133.1;Parent=gene-O5D79_000567;Dbxref=NCBI_GP:HJH9162133.1;Name=HJH9162133.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460324.1;locus_tag=O5D79_000567;product=type I 3-dehydroquinate dehydratase;protein_id=HJH9162133.1;transl_table=11 DALFDJ020000002.1 tpg gene 203749 205344 . + . ID=gene-O5D79_000568;Name=O5D79_000568;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000568 DALFDJ020000002.1 Protein Homology CDS 203749 205344 . + 0 ID=cds-HJH9162134.1;Parent=gene-O5D79_000568;Dbxref=NCBI_GP:HJH9162134.1;Name=HJH9162134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=O5D79_000568;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=HJH9162134.1;transl_table=11 DALFDJ020000002.1 tpg gene 205358 206509 . + . ID=gene-O5D79_000569;Name=O5D79_000569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000569 DALFDJ020000002.1 Protein Homology CDS 205358 206509 . + 0 ID=cds-HJH9162135.1;Parent=gene-O5D79_000569;Dbxref=NCBI_GP:HJH9162135.1;Name=HJH9162135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460322.1;locus_tag=O5D79_000569;product=acyl-CoA dehydrogenase;protein_id=HJH9162135.1;transl_table=11 DALFDJ020000002.1 tpg gene 206585 207475 . - . ID=gene-O5D79_000570;Name=O5D79_000570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000570 DALFDJ020000002.1 Protein Homology CDS 206585 207475 . - 0 ID=cds-HJH9162136.1;Parent=gene-O5D79_000570;Dbxref=NCBI_GP:HJH9162136.1;Name=HJH9162136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460321.1;locus_tag=O5D79_000570;product=AraC family transcriptional regulator;protein_id=HJH9162136.1;transl_table=11 DALFDJ020000002.1 tpg gene 207938 208702 . + . ID=gene-O5D79_000571;Name=O5D79_000571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000571 DALFDJ020000002.1 Protein Homology CDS 207938 208702 . + 0 ID=cds-HJH9162137.1;Parent=gene-O5D79_000571;Dbxref=NCBI_GP:HJH9162137.1;Name=HJH9162137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460320.1;locus_tag=O5D79_000571;product=electron transfer flavoprotein;protein_id=HJH9162137.1;transl_table=11 DALFDJ020000002.1 tpg gene 208724 209659 . + . ID=gene-O5D79_000572;Name=O5D79_000572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000572 DALFDJ020000002.1 Protein Homology CDS 208724 209659 . + 0 ID=cds-HJH9162138.1;Parent=gene-O5D79_000572;Dbxref=NCBI_GP:HJH9162138.1;Name=HJH9162138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460319.1;locus_tag=O5D79_000572;product=electron transfer flavoprotein subunit alpha;protein_id=HJH9162138.1;transl_table=11 DALFDJ020000002.1 tpg gene 209716 211002 . + . ID=gene-O5D79_000573;Name=O5D79_000573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000573 DALFDJ020000002.1 Protein Homology CDS 209716 211002 . + 0 ID=cds-HJH9162139.1;Parent=gene-O5D79_000573;Dbxref=NCBI_GP:HJH9162139.1;Name=HJH9162139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460318.1;locus_tag=O5D79_000573;product=FAD-dependent oxidoreductase;protein_id=HJH9162139.1;transl_table=11 DALFDJ020000002.1 tpg gene 210999 211292 . + . ID=gene-O5D79_000574;Name=O5D79_000574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000574 DALFDJ020000002.1 Protein Homology CDS 210999 211292 . + 0 ID=cds-HJH9162140.1;Parent=gene-O5D79_000574;Dbxref=NCBI_GP:HJH9162140.1;Name=HJH9162140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460317.1;locus_tag=O5D79_000574;product=ferredoxin family protein;protein_id=HJH9162140.1;transl_table=11 DALFDJ020000002.1 tpg gene 211382 213022 . + . ID=gene-O5D79_000575;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=O5D79_000575 DALFDJ020000002.1 Protein Homology CDS 211382 213022 . + 0 ID=cds-HJH9162141.1;Parent=gene-O5D79_000575;Dbxref=NCBI_GP:HJH9162141.1;Name=HJH9162141.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460316.1;locus_tag=O5D79_000575;product=medium-chain fatty-acid--CoA ligase;protein_id=HJH9162141.1;transl_table=11 DALFDJ020000002.1 tpg gene 213064 215442 . - . ID=gene-O5D79_000576;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=O5D79_000576 DALFDJ020000002.1 Protein Homology CDS 213064 215442 . - 0 ID=cds-HJH9162142.1;Parent=gene-O5D79_000576;Dbxref=NCBI_GP:HJH9162142.1;Name=HJH9162142.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460315.1;locus_tag=O5D79_000576;product=phosphoenolpyruvate synthase;protein_id=HJH9162142.1;transl_table=11 DALFDJ020000002.1 tpg gene 215779 216612 . + . ID=gene-O5D79_000577;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=O5D79_000577 DALFDJ020000002.1 Protein Homology CDS 215779 216612 . + 0 ID=cds-HJH9162143.1;Parent=gene-O5D79_000577;Dbxref=NCBI_GP:HJH9162143.1;Name=HJH9162143.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460314.1;locus_tag=O5D79_000577;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=HJH9162143.1;transl_table=11 DALFDJ020000002.1 tpg gene 216768 217814 . + . ID=gene-O5D79_000578;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=O5D79_000578 DALFDJ020000002.1 Protein Homology CDS 216768 217814 . + 0 ID=cds-HJH9162144.1;Parent=gene-O5D79_000578;Dbxref=NCBI_GP:HJH9162144.1;Name=HJH9162144.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460313.1;locus_tag=O5D79_000578;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=HJH9162144.1;transl_table=11 DALFDJ020000002.1 tpg gene 217971 218162 . + . ID=gene-O5D79_000579;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=O5D79_000579 DALFDJ020000002.1 Protein Homology CDS 217971 218162 . + 0 ID=cds-HJH9162145.1;Parent=gene-O5D79_000579;Dbxref=NCBI_GP:HJH9162145.1;Name=HJH9162145.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460312.1;locus_tag=O5D79_000579;product=hemin uptake protein HemP;protein_id=HJH9162145.1;transl_table=11 DALFDJ020000002.1 tpg gene 218197 219639 . - . ID=gene-O5D79_000580;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=O5D79_000580 DALFDJ020000002.1 Protein Homology CDS 218197 219639 . - 0 ID=cds-HJH9162146.1;Parent=gene-O5D79_000580;Dbxref=NCBI_GP:HJH9162146.1;Name=HJH9162146.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460311.1;locus_tag=O5D79_000580;product=protein adenylyltransferase SelO;protein_id=HJH9162146.1;transl_table=11 DALFDJ020000002.1 tpg gene 219701 220414 . - . ID=gene-O5D79_000581;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=O5D79_000581 DALFDJ020000002.1 Protein Homology CDS 219701 220414 . - 0 ID=cds-HJH9162147.1;Parent=gene-O5D79_000581;Dbxref=NCBI_GP:HJH9162147.1;Name=HJH9162147.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460310.1;locus_tag=O5D79_000581;product=anti-FlhDC factor YdiV;protein_id=HJH9162147.1;transl_table=11 DALFDJ020000002.1 tpg gene 220727 221191 . - . ID=gene-O5D79_000582;Name=O5D79_000582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000582 DALFDJ020000002.1 Protein Homology CDS 220727 221191 . - 0 ID=cds-HJH9162148.1;Parent=gene-O5D79_000582;Dbxref=NCBI_GP:HJH9162148.1;Name=HJH9162148.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=O5D79_000582;product=C40 family peptidase;protein_id=HJH9162148.1;transl_table=11 DALFDJ020000002.1 tpg gene 221268 222017 . - . ID=gene-O5D79_000583;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=O5D79_000583 DALFDJ020000002.1 Protein Homology CDS 221268 222017 . - 0 ID=cds-HJH9162149.1;Parent=gene-O5D79_000583;Dbxref=NCBI_GP:HJH9162149.1;Name=HJH9162149.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460308.1;locus_tag=O5D79_000583;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=HJH9162149.1;transl_table=11 DALFDJ020000002.1 tpg gene 222017 222568 . - . ID=gene-O5D79_000584;Name=O5D79_000584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000584 DALFDJ020000002.1 Protein Homology CDS 222017 222568 . - 0 ID=cds-HJH9162150.1;Parent=gene-O5D79_000584;Dbxref=NCBI_GP:HJH9162150.1;Name=HJH9162150.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460307.1;locus_tag=O5D79_000584;product=glutathione peroxidase;protein_id=HJH9162150.1;transl_table=11 DALFDJ020000002.1 tpg gene 222660 223640 . - . ID=gene-O5D79_000585;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=O5D79_000585 DALFDJ020000002.1 Protein Homology CDS 222660 223640 . - 0 ID=cds-HJH9162151.1;Parent=gene-O5D79_000585;Dbxref=NCBI_GP:HJH9162151.1;Name=HJH9162151.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460306.1;locus_tag=O5D79_000585;product=vitamin B12 ABC transporter permease BtuC;protein_id=HJH9162151.1;transl_table=11 DALFDJ020000002.1 tpg gene 223843 224142 . - . ID=gene-O5D79_000586;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=O5D79_000586 DALFDJ020000002.1 Protein Homology CDS 223843 224142 . - 0 ID=cds-HJH9162152.1;Parent=gene-O5D79_000586;Dbxref=NCBI_GP:HJH9162152.1;Name=HJH9162152.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460305.1;locus_tag=O5D79_000586;product=integration host factor subunit alpha;protein_id=HJH9162152.1;transl_table=11 DALFDJ020000002.1 tpg gene 224147 226534 . - . ID=gene-O5D79_000587;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=O5D79_000587 DALFDJ020000002.1 Protein Homology CDS 224147 226534 . - 0 ID=cds-HJH9162153.1;Parent=gene-O5D79_000587;Dbxref=NCBI_GP:HJH9162153.1;Name=HJH9162153.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460304.1;locus_tag=O5D79_000587;product=phenylalanine--tRNA ligase subunit beta;protein_id=HJH9162153.1;transl_table=11 DALFDJ020000002.1 tpg gene 226550 227533 . - . ID=gene-O5D79_000588;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=O5D79_000588 DALFDJ020000002.1 Protein Homology CDS 226550 227533 . - 0 ID=cds-HJH9162154.1;Parent=gene-O5D79_000588;Dbxref=NCBI_GP:HJH9162154.1;Name=HJH9162154.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=O5D79_000588;product=phenylalanine--tRNA ligase subunit alpha;protein_id=HJH9162154.1;transl_table=11 DALFDJ020000002.1 cmsearch sequence_feature 227596 227719 . - . ID=id-DALFDJ020000002.1:227596..227719;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 DALFDJ020000002.1 tpg gene 227670 227714 . - . ID=gene-O5D79_000589;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=O5D79_000589 DALFDJ020000002.1 Protein Homology CDS 227670 227714 . - 0 ID=cds-HJH9162155.1;Parent=gene-O5D79_000589;Dbxref=NCBI_GP:HJH9162155.1;Name=HJH9162155.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=O5D79_000589;product=pheST operon leader peptide PheM;protein_id=HJH9162155.1;transl_table=11 DALFDJ020000002.1 tpg gene 227835 228191 . - . ID=gene-O5D79_000590;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=O5D79_000590 DALFDJ020000002.1 Protein Homology CDS 227835 228191 . - 0 ID=cds-HJH9162156.1;Parent=gene-O5D79_000590;Dbxref=NCBI_GP:HJH9162156.1;Name=HJH9162156.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=O5D79_000590;product=50S ribosomal protein L20;protein_id=HJH9162156.1;transl_table=11 DALFDJ020000002.1 tpg gene 228242 228439 . - . ID=gene-O5D79_000591;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=O5D79_000591 DALFDJ020000002.1 Protein Homology CDS 228242 228439 . - 0 ID=cds-HJH9162157.1;Parent=gene-O5D79_000591;Dbxref=NCBI_GP:HJH9162157.1;Name=HJH9162157.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=O5D79_000591;product=50S ribosomal protein L35;protein_id=HJH9162157.1;transl_table=11 DALFDJ020000002.1 tpg gene 228535 229077 . - . ID=gene-O5D79_000592;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=O5D79_000592 DALFDJ020000002.1 Protein Homology CDS 228535 229077 . - 0 ID=cds-HJH9162158.1;Parent=gene-O5D79_000592;Dbxref=NCBI_GP:HJH9162158.1;Name=HJH9162158.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=O5D79_000592;product=translation initiation factor IF-3;protein_id=HJH9162158.1;transl_table=11 DALFDJ020000002.1 tpg gene 229081 231009 . - . ID=gene-O5D79_000593;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=O5D79_000593 DALFDJ020000002.1 Protein Homology CDS 229081 231009 . - 0 ID=cds-HJH9162159.1;Parent=gene-O5D79_000593;Dbxref=NCBI_GP:HJH9162159.1;Name=HJH9162159.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=O5D79_000593;product=threonine--tRNA ligase;protein_id=HJH9162159.1;transl_table=11 DALFDJ020000002.1 tpg gene 231269 232123 . - . ID=gene-O5D79_000594;Name=O5D79_000594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000594 DALFDJ020000002.1 Protein Homology CDS 231269 232123 . - 0 ID=cds-HJH9162160.1;Parent=gene-O5D79_000594;Dbxref=NCBI_GP:HJH9162160.1;Name=HJH9162160.1;Ontology_term=GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460296.1;locus_tag=O5D79_000594;product=DNA/RNA non-specific endonuclease;protein_id=HJH9162160.1;transl_table=11 DALFDJ020000002.1 tpg gene 232120 232434 . - . ID=gene-O5D79_000595;Name=O5D79_000595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000595 DALFDJ020000002.1 Protein Homology CDS 232120 232434 . - 0 ID=cds-HJH9162161.1;Parent=gene-O5D79_000595;Dbxref=NCBI_GP:HJH9162161.1;Name=HJH9162161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460295.1;locus_tag=O5D79_000595;product=hypothetical protein;protein_id=HJH9162161.1;transl_table=11 DALFDJ020000002.1 tpg gene 232576 233535 . + . ID=gene-O5D79_000596;Name=O5D79_000596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000596 DALFDJ020000002.1 Protein Homology CDS 232576 233535 . + 0 ID=cds-HJH9162162.1;Parent=gene-O5D79_000596;Dbxref=NCBI_GP:HJH9162162.1;Name=HJH9162162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460294.1;locus_tag=O5D79_000596;product=lipid A deacylase LpxR family protein;protein_id=HJH9162162.1;transl_table=11 DALFDJ020000002.1 tpg gene 233584 234342 . - . ID=gene-O5D79_000597;Name=O5D79_000597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000597 DALFDJ020000002.1 Protein Homology CDS 233584 234342 . - 0 ID=cds-HJH9162163.1;Parent=gene-O5D79_000597;Dbxref=NCBI_GP:HJH9162163.1;Name=HJH9162163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460293.1;locus_tag=O5D79_000597;product=DUF481 domain-containing protein;protein_id=HJH9162163.1;transl_table=11 DALFDJ020000002.1 tpg gene 234631 235563 . + . ID=gene-O5D79_000598;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=O5D79_000598 DALFDJ020000002.1 Protein Homology CDS 234631 235563 . + 0 ID=cds-HJH9162164.1;Parent=gene-O5D79_000598;Dbxref=NCBI_GP:HJH9162164.1;Name=HJH9162164.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460292.1;locus_tag=O5D79_000598;product=6-phosphofructokinase II;protein_id=HJH9162164.1;transl_table=11 DALFDJ020000002.1 tpg gene 235660 235950 . + . ID=gene-O5D79_000599;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=O5D79_000599 DALFDJ020000002.1 Protein Homology CDS 235660 235950 . + 0 ID=cds-HJH9162165.1;Parent=gene-O5D79_000599;Dbxref=NCBI_GP:HJH9162165.1;Name=HJH9162165.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460291.1;locus_tag=O5D79_000599;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=HJH9162165.1;transl_table=11 DALFDJ020000002.1 tpg gene 236057 236917 . + . ID=gene-O5D79_000600;Name=O5D79_000600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000600 DALFDJ020000002.1 Protein Homology CDS 236057 236917 . + 0 ID=cds-HJH9162166.1;Parent=gene-O5D79_000600;Dbxref=NCBI_GP:HJH9162166.1;Name=HJH9162166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460290.1;locus_tag=O5D79_000600;product=fructosamine kinase family protein;protein_id=HJH9162166.1;transl_table=11 DALFDJ020000002.1 tpg gene 236960 237496 . - . ID=gene-O5D79_000601;Name=O5D79_000601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000601 DALFDJ020000002.1 Protein Homology CDS 236960 237496 . - 0 ID=cds-HJH9162167.1;Parent=gene-O5D79_000601;Dbxref=NCBI_GP:HJH9162167.1;Name=HJH9162167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460289.1;locus_tag=O5D79_000601;product=YniB family protein;protein_id=HJH9162167.1;transl_table=11 DALFDJ020000002.1 tpg gene 237645 238313 . + . ID=gene-O5D79_000602;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=O5D79_000602 DALFDJ020000002.1 Protein Homology CDS 237645 238313 . + 0 ID=cds-HJH9162168.1;Parent=gene-O5D79_000602;Dbxref=NCBI_GP:HJH9162168.1;Name=HJH9162168.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460288.1;locus_tag=O5D79_000602;product=hexitol phosphatase HxpB;protein_id=HJH9162168.1;transl_table=11 DALFDJ020000002.1 tpg gene 238451 239050 . + . ID=gene-O5D79_000603;Name=O5D79_000603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000603 DALFDJ020000002.1 Protein Homology CDS 238451 239050 . + 0 ID=cds-HJH9162169.1;Parent=gene-O5D79_000603;Dbxref=NCBI_GP:HJH9162169.1;Name=HJH9162169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460287.3;locus_tag=O5D79_000603;product=metal-dependent hydrolase;protein_id=HJH9162169.1;transl_table=11 DALFDJ020000002.1 tpg gene 239187 240578 . + . ID=gene-O5D79_000604;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=O5D79_000604 DALFDJ020000002.1 Protein Homology CDS 239187 240578 . + 0 ID=cds-HJH9162170.1;Parent=gene-O5D79_000604;Dbxref=NCBI_GP:HJH9162170.1;Name=HJH9162170.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=O5D79_000604;product=cystine/sulfocysteine:cation symporter;protein_id=HJH9162170.1;transl_table=11 DALFDJ020000002.1 tpg gene 240681 240923 . - . ID=gene-O5D79_000605;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=O5D79_000605 DALFDJ020000002.1 Protein Homology CDS 240681 240923 . - 0 ID=cds-HJH9162171.1;Parent=gene-O5D79_000605;Dbxref=NCBI_GP:HJH9162171.1;Name=HJH9162171.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460285.1;locus_tag=O5D79_000605;product=cell division activator CedA;protein_id=HJH9162171.1;transl_table=11 DALFDJ020000002.1 tpg gene 241140 243392 . + . ID=gene-O5D79_000606;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=O5D79_000606 DALFDJ020000002.1 Protein Homology CDS 241140 243392 . + 0 ID=cds-HJH9162172.1;Parent=gene-O5D79_000606;Dbxref=NCBI_GP:HJH9162172.1;Name=HJH9162172.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460284.1;locus_tag=O5D79_000606;product=catalase HPII;protein_id=HJH9162172.1;transl_table=11 DALFDJ020000002.1 tpg gene 243436 244194 . - . ID=gene-O5D79_000607;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=O5D79_000607 DALFDJ020000002.1 Protein Homology CDS 243436 244194 . - 0 ID=cds-HJH9162173.1;Parent=gene-O5D79_000607;Dbxref=NCBI_GP:HJH9162173.1;Name=HJH9162173.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460283.1;locus_tag=O5D79_000607;product=chitin disaccharide deacetylase;protein_id=HJH9162173.1;transl_table=11 DALFDJ020000002.1 tpg gene 244207 245562 . - . ID=gene-O5D79_000608;Name=O5D79_000608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000608 DALFDJ020000002.1 Protein Homology CDS 244207 245562 . - 0 ID=cds-HJH9162174.1;Parent=gene-O5D79_000608;Dbxref=NCBI_GP:HJH9162174.1;Name=HJH9162174.1;Ontology_term=GO:0005975,GO:0008706,GO:0046872;gbkey=CDS;go_function=6-phospho-beta-glucosidase activity|0008706||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460282.1;locus_tag=O5D79_000608;product=6-phospho-beta-glucosidase;protein_id=HJH9162174.1;transl_table=11 DALFDJ020000002.1 tpg gene 245687 246529 . - . ID=gene-O5D79_000609;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=O5D79_000609 DALFDJ020000002.1 Protein Homology CDS 245687 246529 . - 0 ID=cds-HJH9162175.1;Parent=gene-O5D79_000609;Dbxref=NCBI_GP:HJH9162175.1;Name=HJH9162175.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460281.1;locus_tag=O5D79_000609;product=transcriptional regulator ChbR;protein_id=HJH9162175.1;transl_table=11 DALFDJ020000002.1 tpg gene 246540 246887 . - . ID=gene-O5D79_000610;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=O5D79_000610 DALFDJ020000002.1 Protein Homology CDS 246540 246887 . - 0 ID=cds-HJH9162176.1;Parent=gene-O5D79_000610;Dbxref=NCBI_GP:HJH9162176.1;Name=HJH9162176.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460280.1;locus_tag=O5D79_000610;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=HJH9162176.1;transl_table=11 DALFDJ020000002.1 tpg gene 246938 248296 . - . ID=gene-O5D79_000611;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=O5D79_000611 DALFDJ020000002.1 Protein Homology CDS 246938 248296 . - 0 ID=cds-HJH9162177.1;Parent=gene-O5D79_000611;Dbxref=NCBI_GP:HJH9162177.1;Name=HJH9162177.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=O5D79_000611;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=HJH9162177.1;transl_table=11 DALFDJ020000002.1 tpg gene 248379 248699 . - . ID=gene-O5D79_000612;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=O5D79_000612 DALFDJ020000002.1 Protein Homology CDS 248379 248699 . - 0 ID=cds-HJH9162178.1;Parent=gene-O5D79_000612;Dbxref=NCBI_GP:HJH9162178.1;Name=HJH9162178.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460278.1;locus_tag=O5D79_000612;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=HJH9162178.1;transl_table=11 DALFDJ020000002.1 tpg gene 249000 249341 . - . ID=gene-O5D79_000613;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=O5D79_000613 DALFDJ020000002.1 Protein Homology CDS 249000 249341 . - 0 ID=cds-HJH9162179.1;Parent=gene-O5D79_000613;Dbxref=NCBI_GP:HJH9162179.1;Name=HJH9162179.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460277.1;locus_tag=O5D79_000613;product=osmotically-inducible lipoprotein OsmE;protein_id=HJH9162179.1;transl_table=11 DALFDJ020000002.1 tpg gene 249560 250387 . + . ID=gene-O5D79_000614;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=O5D79_000614 DALFDJ020000002.1 Protein Homology CDS 249560 250387 . + 0 ID=cds-HJH9162180.1;Parent=gene-O5D79_000614;Dbxref=NCBI_GP:HJH9162180.1;Name=HJH9162180.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=O5D79_000614;product=ammonia-dependent NAD(+) synthetase;protein_id=HJH9162180.1;transl_table=11 DALFDJ020000002.1 tpg gene 250508 251389 . + . ID=gene-O5D79_000615;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=O5D79_000615 DALFDJ020000002.1 Protein Homology CDS 250508 251389 . + 0 ID=cds-HJH9162181.1;Parent=gene-O5D79_000615;Dbxref=NCBI_GP:HJH9162181.1;Name=HJH9162181.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011233065.1;locus_tag=O5D79_000615;product=excinuclease Cho;protein_id=HJH9162181.1;transl_table=11 DALFDJ020000002.1 tpg gene 251464 251949 . - . ID=gene-O5D79_000616;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=O5D79_000616 DALFDJ020000002.1 Protein Homology CDS 251464 251949 . - 0 ID=cds-HJH9162182.1;Parent=gene-O5D79_000616;Dbxref=NCBI_GP:HJH9162182.1;Name=HJH9162182.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460274.1;locus_tag=O5D79_000616;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=HJH9162182.1;transl_table=11 DALFDJ020000002.1 tpg gene 252285 253253 . - . ID=gene-O5D79_000617;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=O5D79_000617 DALFDJ020000002.1 Protein Homology CDS 252285 253253 . - 0 ID=cds-HJH9162183.1;Parent=gene-O5D79_000617;Dbxref=NCBI_GP:HJH9162183.1;Name=HJH9162183.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460273.1;locus_tag=O5D79_000617;product=succinylglutamate desuccinylase;protein_id=HJH9162183.1;transl_table=11 DALFDJ020000002.1 tpg gene 253246 254589 . - . ID=gene-O5D79_000618;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=O5D79_000618 DALFDJ020000002.1 Protein Homology CDS 253246 254589 . - 0 ID=cds-HJH9162184.1;Parent=gene-O5D79_000618;Dbxref=NCBI_GP:HJH9162184.1;Name=HJH9162184.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460272.1;locus_tag=O5D79_000618;product=N-succinylarginine dihydrolase;protein_id=HJH9162184.1;transl_table=11 DALFDJ020000002.1 tpg gene 254586 256064 . - . ID=gene-O5D79_000619;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=O5D79_000619 DALFDJ020000002.1 Protein Homology CDS 254586 256064 . - 0 ID=cds-HJH9162185.1;Parent=gene-O5D79_000619;Dbxref=NCBI_GP:HJH9162185.1;Name=HJH9162185.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460271.1;locus_tag=O5D79_000619;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=HJH9162185.1;transl_table=11 DALFDJ020000002.1 tpg gene 256061 257095 . - . ID=gene-O5D79_000620;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=O5D79_000620 DALFDJ020000002.1 Protein Homology CDS 256061 257095 . - 0 ID=cds-HJH9162186.1;Parent=gene-O5D79_000620;Dbxref=NCBI_GP:HJH9162186.1;Name=HJH9162186.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460270.1;locus_tag=O5D79_000620;product=arginine N-succinyltransferase;protein_id=HJH9162186.1;transl_table=11 DALFDJ020000002.1 tpg gene 257086 258312 . - . ID=gene-O5D79_000621;Name=O5D79_000621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000621 DALFDJ020000002.1 Protein Homology CDS 257086 258312 . - 0 ID=cds-HJH9162187.1;Parent=gene-O5D79_000621;Dbxref=NCBI_GP:HJH9162187.1;Name=HJH9162187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460269.1;locus_tag=O5D79_000621;product=aspartate aminotransferase family protein;protein_id=HJH9162187.1;transl_table=11 DALFDJ020000002.1 tpg gene 258758 259564 . + . ID=gene-O5D79_000622;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=O5D79_000622 DALFDJ020000002.1 Protein Homology CDS 258758 259564 . + 0 ID=cds-HJH9162188.1;Parent=gene-O5D79_000622;Dbxref=NCBI_GP:HJH9162188.1;Name=HJH9162188.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460268.1;locus_tag=O5D79_000622;product=exodeoxyribonuclease III;protein_id=HJH9162188.1;transl_table=11 DALFDJ020000002.1 tpg gene 259637 260053 . + . ID=gene-O5D79_000623;Name=O5D79_000623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000623 DALFDJ020000002.1 Protein Homology CDS 259637 260053 . + 0 ID=cds-HJH9162189.1;Parent=gene-O5D79_000623;Dbxref=NCBI_GP:HJH9162189.1;Name=HJH9162189.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460267.1;locus_tag=O5D79_000623;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=HJH9162189.1;transl_table=11 DALFDJ020000002.1 tpg gene 260013 260288 . - . ID=gene-O5D79_000624;Name=O5D79_000624;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000624 DALFDJ020000002.1 Protein Homology CDS 260013 260288 . - 0 ID=cds-HJH9162190.1;Parent=gene-O5D79_000624;Dbxref=NCBI_GP:HJH9162190.1;Name=HJH9162190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465441.1;locus_tag=O5D79_000624;product=YnjH family protein;protein_id=HJH9162190.1;transl_table=11 DALFDJ020000002.1 tpg gene 260527 261870 . + . ID=gene-O5D79_000625;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=O5D79_000625 DALFDJ020000002.1 Protein Homology CDS 260527 261870 . + 0 ID=cds-HJH9162191.1;Parent=gene-O5D79_000625;Dbxref=NCBI_GP:HJH9162191.1;Name=HJH9162191.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460265.1;locus_tag=O5D79_000625;product=NADP-specific glutamate dehydrogenase;protein_id=HJH9162191.1;transl_table=11 DALFDJ020000002.1 tpg gene 261900 263849 . - . ID=gene-O5D79_000626;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=O5D79_000626 DALFDJ020000002.1 Protein Homology CDS 261900 263849 . - 0 ID=cds-HJH9162192.1;Parent=gene-O5D79_000626;Dbxref=NCBI_GP:HJH9162192.1;Name=HJH9162192.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460264.1;locus_tag=O5D79_000626;product=DNA topoisomerase III;protein_id=HJH9162192.1;transl_table=11 DALFDJ020000002.1 tpg gene 263854 264897 . - . ID=gene-O5D79_000627;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=O5D79_000627 DALFDJ020000002.1 Protein Homology CDS 263854 264897 . - 0 ID=cds-HJH9162193.1;Parent=gene-O5D79_000627;Dbxref=NCBI_GP:HJH9162193.1;Name=HJH9162193.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460263.1;locus_tag=O5D79_000627;product=selenide%2C water dikinase SelD;protein_id=HJH9162193.1;transl_table=11 DALFDJ020000002.1 tpg gene 265015 265566 . - . ID=gene-O5D79_000628;Name=O5D79_000628;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000628 DALFDJ020000002.1 Protein Homology CDS 265015 265566 . - 0 ID=cds-HJH9162194.1;Parent=gene-O5D79_000628;Dbxref=NCBI_GP:HJH9162194.1;Name=HJH9162194.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460262.1;locus_tag=O5D79_000628;product=NAD(P)H nitroreductase;protein_id=HJH9162194.1;transl_table=11 DALFDJ020000002.1 tpg gene 265740 267596 . + . ID=gene-O5D79_000629;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=O5D79_000629 DALFDJ020000002.1 Protein Homology CDS 265740 267596 . + 0 ID=cds-HJH9162195.1;Parent=gene-O5D79_000629;Dbxref=NCBI_GP:HJH9162195.1;Name=HJH9162195.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460261.1;locus_tag=O5D79_000629;product=signal peptide peptidase SppA;protein_id=HJH9162195.1;transl_table=11 DALFDJ020000002.1 tpg gene 267692 268708 . + . ID=gene-O5D79_000630;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=O5D79_000630 DALFDJ020000002.1 Protein Homology CDS 267692 268708 . + 0 ID=cds-HJH9162196.1;Parent=gene-O5D79_000630;Dbxref=NCBI_GP:HJH9162196.1;Name=HJH9162196.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460260.1;locus_tag=O5D79_000630;product=asparaginase;protein_id=HJH9162196.1;transl_table=11 DALFDJ020000002.1 tpg gene 268735 269391 . + . ID=gene-O5D79_000631;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=O5D79_000631 DALFDJ020000002.1 Protein Homology CDS 268735 269391 . + 0 ID=cds-HJH9162197.1;Parent=gene-O5D79_000631;Dbxref=NCBI_GP:HJH9162197.1;Name=HJH9162197.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460259.1;locus_tag=O5D79_000631;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=HJH9162197.1;transl_table=11 DALFDJ020000002.1 tpg gene 269494 270852 . - . ID=gene-O5D79_000632;Name=O5D79_000632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000632 DALFDJ020000002.1 Protein Homology CDS 269494 270852 . - 0 ID=cds-HJH9162198.1;Parent=gene-O5D79_000632;Dbxref=NCBI_GP:HJH9162198.1;Name=HJH9162198.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000389924.1;locus_tag=O5D79_000632;product=MFS transporter;protein_id=HJH9162198.1;transl_table=11 DALFDJ020000002.1 tpg gene 270988 271746 . - . ID=gene-O5D79_000633;Name=O5D79_000633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000633 DALFDJ020000002.1 Protein Homology CDS 270988 271746 . - 0 ID=cds-HJH9162199.1;Parent=gene-O5D79_000633;Dbxref=NCBI_GP:HJH9162199.1;Name=HJH9162199.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226392.1;locus_tag=O5D79_000633;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=HJH9162199.1;transl_table=11 DALFDJ020000002.1 tpg gene 271876 272859 . - . ID=gene-O5D79_000634;Name=ydjG;gbkey=Gene;gene=ydjG;gene_biotype=protein_coding;locus_tag=O5D79_000634 DALFDJ020000002.1 Protein Homology CDS 271876 272859 . - 0 ID=cds-HJH9162200.1;Parent=gene-O5D79_000634;Dbxref=NCBI_GP:HJH9162200.1;Name=HJH9162200.1;Ontology_term=GO:0019170;gbkey=CDS;gene=ydjG;go_function=methylglyoxal reductase (NADH) activity|0019170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782140.1;locus_tag=O5D79_000634;product=NADH-dependent methylglyoxal reductase;protein_id=HJH9162200.1;transl_table=11 DALFDJ020000002.1 tpg gene 272869 273816 . - . ID=gene-O5D79_000635;Name=O5D79_000635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000635 DALFDJ020000002.1 Protein Homology CDS 272869 273816 . - 0 ID=cds-HJH9162201.1;Parent=gene-O5D79_000635;Dbxref=NCBI_GP:HJH9162201.1;Name=HJH9162201.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416286.4;locus_tag=O5D79_000635;product=sugar kinase;protein_id=HJH9162201.1;transl_table=11 DALFDJ020000002.1 tpg gene 273821 274657 . - . ID=gene-O5D79_000636;Name=O5D79_000636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000636 DALFDJ020000002.1 Protein Homology CDS 273821 274657 . - 0 ID=cds-HJH9162202.1;Parent=gene-O5D79_000636;Dbxref=NCBI_GP:HJH9162202.1;Name=HJH9162202.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416287.1;locus_tag=O5D79_000636;product=ketose-bisphosphate aldolase;protein_id=HJH9162202.1;transl_table=11 DALFDJ020000002.1 tpg gene 274679 275722 . - . ID=gene-O5D79_000637;Name=O5D79_000637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000637 DALFDJ020000002.1 Protein Homology CDS 274679 275722 . - 0 ID=cds-HJH9162203.1;Parent=gene-O5D79_000637;Dbxref=NCBI_GP:HJH9162203.1;Name=HJH9162203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416288.1;locus_tag=O5D79_000637;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=HJH9162203.1;transl_table=11 DALFDJ020000002.1 tpg gene 275733 277112 . - . ID=gene-O5D79_000638;Name=O5D79_000638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000638 DALFDJ020000002.1 Protein Homology CDS 275733 277112 . - 0 ID=cds-HJH9162204.1;Parent=gene-O5D79_000638;Dbxref=NCBI_GP:HJH9162204.1;Name=HJH9162204.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=O5D79_000638;product=MFS transporter;protein_id=HJH9162204.1;transl_table=11 DALFDJ020000002.1 tpg gene 277139 278215 . - . ID=gene-O5D79_000639;Name=O5D79_000639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000639 DALFDJ020000002.1 Protein Homology CDS 277139 278215 . - 0 ID=cds-HJH9162205.1;Parent=gene-O5D79_000639;Dbxref=NCBI_GP:HJH9162205.1;Name=HJH9162205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310512.1;locus_tag=O5D79_000639;product=zinc-binding dehydrogenase;protein_id=HJH9162205.1;transl_table=11 DALFDJ020000002.1 tpg pseudogene 278508 279005 . + . ID=gene-O5D79_000640;Name=O5D79_000640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_000640;pseudo=true DALFDJ020000002.1 Protein Homology CDS 278508 279005 . + 0 ID=cds-O5D79_000640;Parent=gene-O5D79_000640;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169644.1;locus_tag=O5D79_000640;product=glycosyl hydrolase family 18 protein;pseudo=true;transl_table=11 DALFDJ020000002.1 tpg gene 279108 279386 . - . ID=gene-O5D79_000641;Name=O5D79_000641;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000641 DALFDJ020000002.1 Protein Homology CDS 279108 279386 . - 0 ID=cds-HJH9162206.1;Parent=gene-O5D79_000641;Dbxref=NCBI_GP:HJH9162206.1;Name=HJH9162206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460258.1;locus_tag=O5D79_000641;product=YeaC family protein;protein_id=HJH9162206.1;transl_table=11 DALFDJ020000002.1 tpg gene 279428 279841 . - . ID=gene-O5D79_000642;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=O5D79_000642 DALFDJ020000002.1 Protein Homology CDS 279428 279841 . - 0 ID=cds-HJH9162207.1;Parent=gene-O5D79_000642;Dbxref=NCBI_GP:HJH9162207.1;Name=HJH9162207.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=O5D79_000642;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=HJH9162207.1;transl_table=11 DALFDJ020000002.1 tpg gene 280183 281178 . + . ID=gene-O5D79_000643;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=O5D79_000643 DALFDJ020000002.1 Protein Homology CDS 280183 281178 . + 0 ID=cds-HJH9162208.1;Parent=gene-O5D79_000643;Dbxref=NCBI_GP:HJH9162208.1;Name=HJH9162208.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=O5D79_000643;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=HJH9162208.1;transl_table=11 DALFDJ020000002.1 tpg gene 281513 282397 . + . ID=gene-O5D79_000644;Name=O5D79_000644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000644 DALFDJ020000002.1 Protein Homology CDS 281513 282397 . + 0 ID=cds-HJH9162209.1;Parent=gene-O5D79_000644;Dbxref=NCBI_GP:HJH9162209.1;Name=HJH9162209.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=O5D79_000644;product=D-hexose-6-phosphate mutarotase;protein_id=HJH9162209.1;transl_table=11 DALFDJ020000002.1 tpg gene 282496 283353 . - . ID=gene-O5D79_000645;Name=O5D79_000645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000645 DALFDJ020000002.1 Protein Homology CDS 282496 283353 . - 0 ID=cds-HJH9162210.1;Parent=gene-O5D79_000645;Dbxref=NCBI_GP:HJH9162210.1;Name=HJH9162210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460254.1;locus_tag=O5D79_000645;product=aldo/keto reductase;protein_id=HJH9162210.1;transl_table=11 DALFDJ020000002.1 tpg gene 283451 284647 . - . ID=gene-O5D79_000646;Name=O5D79_000646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000646 DALFDJ020000002.1 Protein Homology CDS 283451 284647 . - 0 ID=cds-HJH9162211.1;Parent=gene-O5D79_000646;Dbxref=NCBI_GP:HJH9162211.1;Name=HJH9162211.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460253.1;locus_tag=O5D79_000646;product=anaerobic sulfatase maturase;protein_id=HJH9162211.1;transl_table=11 DALFDJ020000002.1 tpg gene 284937 285683 . - . ID=gene-O5D79_000647;Name=O5D79_000647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000647 DALFDJ020000002.1 Protein Homology CDS 284937 285683 . - 0 ID=cds-HJH9162212.1;Parent=gene-O5D79_000647;Dbxref=NCBI_GP:HJH9162212.1;Name=HJH9162212.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460252.1;locus_tag=O5D79_000647;product=MipA/OmpV family protein;protein_id=HJH9162212.1;transl_table=11 DALFDJ020000002.1 tpg gene 286110 288044 . + . ID=gene-O5D79_000648;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=O5D79_000648 DALFDJ020000002.1 Protein Homology CDS 286110 288044 . + 0 ID=cds-HJH9162213.1;Parent=gene-O5D79_000648;Dbxref=NCBI_GP:HJH9162213.1;Name=HJH9162213.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=O5D79_000648;product=protein kinase YeaG;protein_id=HJH9162213.1;transl_table=11 DALFDJ020000002.1 tpg gene 288167 289453 . + . ID=gene-O5D79_000649;Name=O5D79_000649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000649 DALFDJ020000002.1 Protein Homology CDS 288167 289453 . + 0 ID=cds-HJH9162214.1;Parent=gene-O5D79_000649;Dbxref=NCBI_GP:HJH9162214.1;Name=HJH9162214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460250.1;locus_tag=O5D79_000649;product=YeaH/YhbH family protein;protein_id=HJH9162214.1;transl_table=11 DALFDJ020000002.1 tpg gene 289598 289798 . - . ID=gene-O5D79_000650;Name=O5D79_000650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000650 DALFDJ020000002.1 GeneMarkS-2+ CDS 289598 289798 . - 0 ID=cds-HJH9162215.1;Parent=gene-O5D79_000650;Dbxref=NCBI_GP:HJH9162215.1;Name=HJH9162215.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_000650;product=hypothetical protein;protein_id=HJH9162215.1;transl_table=11 DALFDJ020000002.1 tpg gene 290093 291586 . + . ID=gene-O5D79_000651;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=O5D79_000651 DALFDJ020000002.1 Protein Homology CDS 290093 291586 . + 0 ID=cds-HJH9162216.1;Parent=gene-O5D79_000651;Dbxref=NCBI_GP:HJH9162216.1;Name=HJH9162216.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460249.1;locus_tag=O5D79_000651;product=diguanylate cyclase DgcJ;protein_id=HJH9162216.1;transl_table=11 DALFDJ020000002.1 tpg gene 291636 292154 . + . ID=gene-O5D79_000652;Name=O5D79_000652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000652 DALFDJ020000002.1 Protein Homology CDS 291636 292154 . + 0 ID=cds-HJH9162217.1;Parent=gene-O5D79_000652;Dbxref=NCBI_GP:HJH9162217.1;Name=HJH9162217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460248.1;locus_tag=O5D79_000652;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=HJH9162217.1;transl_table=11 DALFDJ020000002.1 tpg gene 292151 292258 . - . ID=gene-O5D79_000653;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=O5D79_000653 DALFDJ020000002.1 Protein Homology CDS 292151 292258 . - 0 ID=cds-HJH9162218.1;Parent=gene-O5D79_000653;Dbxref=NCBI_GP:HJH9162218.1;Name=HJH9162218.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460247.1;locus_tag=O5D79_000653;product=small membrane protein YoaI;protein_id=HJH9162218.1;transl_table=11 DALFDJ020000002.1 tpg gene 292464 292910 . + . ID=gene-O5D79_000654;Name=O5D79_000654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000654 DALFDJ020000002.1 Protein Homology CDS 292464 292910 . + 0 ID=cds-HJH9162219.1;Parent=gene-O5D79_000654;Dbxref=NCBI_GP:HJH9162219.1;Name=HJH9162219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460246.2;locus_tag=O5D79_000654;product=DUF441 domain-containing protein;protein_id=HJH9162219.1;transl_table=11 DALFDJ020000002.1 tpg gene 292890 293684 . - . ID=gene-O5D79_000655;Name=O5D79_000655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000655 DALFDJ020000002.1 Protein Homology CDS 292890 293684 . - 0 ID=cds-HJH9162220.1;Parent=gene-O5D79_000655;Dbxref=NCBI_GP:HJH9162220.1;Name=HJH9162220.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460245.1;locus_tag=O5D79_000655;product=AraC family transcriptional regulator;protein_id=HJH9162220.1;transl_table=11 DALFDJ020000002.1 tpg gene 293785 294969 . + . ID=gene-O5D79_000656;Name=O5D79_000656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000656 DALFDJ020000002.1 Protein Homology CDS 293785 294969 . + 0 ID=cds-HJH9162221.1;Parent=gene-O5D79_000656;Dbxref=NCBI_GP:HJH9162221.1;Name=HJH9162221.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460244.1;locus_tag=O5D79_000656;product=CynX/NimT family MFS transporter;protein_id=HJH9162221.1;transl_table=11 DALFDJ020000002.1 tpg gene 295088 295435 . + . ID=gene-O5D79_000657;Name=O5D79_000657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000657 DALFDJ020000002.1 Protein Homology CDS 295088 295435 . + 0 ID=cds-HJH9162222.1;Parent=gene-O5D79_000657;Dbxref=NCBI_GP:HJH9162222.1;Name=HJH9162222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460243.1;locus_tag=O5D79_000657;product=DUF488 domain-containing protein;protein_id=HJH9162222.1;transl_table=11 DALFDJ020000002.1 tpg gene 295421 295732 . - . ID=gene-O5D79_000658;Name=O5D79_000658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000658 DALFDJ020000002.1 Protein Homology CDS 295421 295732 . - 0 ID=cds-HJH9162223.1;Parent=gene-O5D79_000658;Dbxref=NCBI_GP:HJH9162223.1;Name=HJH9162223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460242.1;locus_tag=O5D79_000658;product=hypothetical protein;protein_id=HJH9162223.1;transl_table=11 DALFDJ020000002.1 tpg gene 295801 296052 . - . ID=gene-O5D79_000659;Name=O5D79_000659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000659 DALFDJ020000002.1 Protein Homology CDS 295801 296052 . - 0 ID=cds-HJH9162224.1;Parent=gene-O5D79_000659;Dbxref=NCBI_GP:HJH9162224.1;Name=HJH9162224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460241.1;locus_tag=O5D79_000659;product=putative hemolysin;protein_id=HJH9162224.1;transl_table=11 DALFDJ020000002.1 tpg gene 296248 296346 . + . ID=gene-O5D79_000660;Name=O5D79_000660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000660 DALFDJ020000002.1 Protein Homology CDS 296248 296346 . + 0 ID=cds-HJH9162225.1;Parent=gene-O5D79_000660;Dbxref=NCBI_GP:HJH9162225.1;Name=HJH9162225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=O5D79_000660;product=YoaK family small membrane protein;protein_id=HJH9162225.1;transl_table=11 DALFDJ020000002.1 tpg gene 296486 296734 . - . ID=gene-O5D79_000661;Name=O5D79_000661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000661 DALFDJ020000002.1 Protein Homology CDS 296486 296734 . - 0 ID=cds-HJH9162226.1;Parent=gene-O5D79_000661;Dbxref=NCBI_GP:HJH9162226.1;Name=HJH9162226.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460240.1;locus_tag=O5D79_000661;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=HJH9162226.1;transl_table=11 DALFDJ020000002.1 tpg gene 297048 297689 . - . ID=gene-O5D79_000662;Name=O5D79_000662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000662 DALFDJ020000002.1 Protein Homology CDS 297048 297689 . - 0 ID=cds-HJH9162227.1;Parent=gene-O5D79_000662;Dbxref=NCBI_GP:HJH9162227.1;Name=HJH9162227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460239.1;locus_tag=O5D79_000662;product=hypothetical protein;protein_id=HJH9162227.1;transl_table=11 DALFDJ020000002.1 tpg gene 297919 298101 . - . ID=gene-O5D79_000663;Name=O5D79_000663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000663 DALFDJ020000002.1 Protein Homology CDS 297919 298101 . - 0 ID=cds-HJH9162228.1;Parent=gene-O5D79_000663;Dbxref=NCBI_GP:HJH9162228.1;Name=HJH9162228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=O5D79_000663;product=DUF1869 domain-containing protein;protein_id=HJH9162228.1;transl_table=11 DALFDJ020000002.1 tpg gene 298104 298466 . - . ID=gene-O5D79_000664;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=O5D79_000664 DALFDJ020000002.1 Protein Homology CDS 298104 298466 . - 0 ID=cds-HJH9162229.1;Parent=gene-O5D79_000664;Dbxref=NCBI_GP:HJH9162229.1;Name=HJH9162229.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460237.1;locus_tag=O5D79_000664;product=DUF1971 domain-containing protein YeaR;protein_id=HJH9162229.1;transl_table=11 DALFDJ020000002.1 tpg gene 298639 299277 . - . ID=gene-O5D79_000665;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=O5D79_000665 DALFDJ020000002.1 Protein Homology CDS 298639 299277 . - 0 ID=cds-HJH9162230.1;Parent=gene-O5D79_000665;Dbxref=NCBI_GP:HJH9162230.1;Name=HJH9162230.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460236.1;locus_tag=O5D79_000665;product=leucine efflux protein LeuE;protein_id=HJH9162230.1;transl_table=11 DALFDJ020000002.1 tpg gene 299475 300020 . - . ID=gene-O5D79_000666;Name=O5D79_000666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000666 DALFDJ020000002.1 Protein Homology CDS 299475 300020 . - 0 ID=cds-HJH9162231.1;Parent=gene-O5D79_000666;Dbxref=NCBI_GP:HJH9162231.1;Name=HJH9162231.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460235.1;locus_tag=O5D79_000666;product=chorismate mutase;protein_id=HJH9162231.1;transl_table=11 DALFDJ020000002.1 tpg pseudogene 300103 300257 . + . ID=gene-O5D79_000667;Name=O5D79_000667;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_000667;pseudo=true DALFDJ020000002.1 Protein Homology CDS 300103 300257 . + 0 ID=cds-O5D79_000667;Parent=gene-O5D79_000667;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460234.1;locus_tag=O5D79_000667;product=hypothetical protein;pseudo=true;transl_table=11 DALFDJ020000002.1 tpg gene 300336 300584 . + . ID=gene-O5D79_000668;Name=O5D79_000668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000668 DALFDJ020000002.1 Protein Homology CDS 300336 300584 . + 0 ID=cds-HJH9162232.1;Parent=gene-O5D79_000668;Dbxref=NCBI_GP:HJH9162232.1;Name=HJH9162232.1;Ontology_term=GO:0071468,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460233.1;locus_tag=O5D79_000668;product=biofilm/acid-resistance regulator YmgB/AriR;protein_id=HJH9162232.1;transl_table=11 DALFDJ020000002.1 tpg gene 300839 301687 . - . ID=gene-O5D79_000669;Name=O5D79_000669;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000669 DALFDJ020000002.1 Protein Homology CDS 300839 301687 . - 0 ID=cds-HJH9162233.1;Parent=gene-O5D79_000669;Dbxref=NCBI_GP:HJH9162233.1;Name=HJH9162233.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=O5D79_000669;product=MerR family transcriptional regulator;protein_id=HJH9162233.1;transl_table=11 DALFDJ020000002.1 tpg gene 301756 302349 . - . ID=gene-O5D79_000670;Name=O5D79_000670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000670 DALFDJ020000002.1 Protein Homology CDS 301756 302349 . - 0 ID=cds-HJH9162234.1;Parent=gene-O5D79_000670;Dbxref=NCBI_GP:HJH9162234.1;Name=HJH9162234.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=O5D79_000670;product=helix-turn-helix domain-containing protein;protein_id=HJH9162234.1;transl_table=11 DALFDJ020000002.1 tpg gene 302494 303282 . - . ID=gene-O5D79_000671;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=O5D79_000671 DALFDJ020000002.1 Protein Homology CDS 302494 303282 . - 0 ID=cds-HJH9162235.1;Parent=gene-O5D79_000671;Dbxref=NCBI_GP:HJH9162235.1;Name=HJH9162235.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=O5D79_000671;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=HJH9162235.1;transl_table=11 ##sequence-region DALFDJ020000003.1 1 284098 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000003.1 tpg region 1 284098 . + . ID=DALFDJ020000003.1:1..284098;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000003.1 tpg gene 56 1489 . - . ID=gene-O5D79_000672;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=O5D79_000672 DALFDJ020000003.1 Protein Homology CDS 56 1489 . - 0 ID=cds-HJH9162236.1;Parent=gene-O5D79_000672;Dbxref=NCBI_GP:HJH9162236.1;Name=HJH9162236.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462211.1;locus_tag=O5D79_000672;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=HJH9162236.1;transl_table=11 DALFDJ020000003.1 tpg gene 1737 2213 . + . ID=gene-O5D79_000673;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=O5D79_000673 DALFDJ020000003.1 Protein Homology CDS 1737 2213 . + 0 ID=cds-HJH9162237.1;Parent=gene-O5D79_000673;Dbxref=NCBI_GP:HJH9162237.1;Name=HJH9162237.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=O5D79_000673;product=transcription elongation factor GreA;protein_id=HJH9162237.1;transl_table=11 DALFDJ020000003.1 tpg gene 2369 2662 . - . ID=gene-O5D79_000674;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=O5D79_000674 DALFDJ020000003.1 Protein Homology CDS 2369 2662 . - 0 ID=cds-HJH9162238.1;Parent=gene-O5D79_000674;Dbxref=NCBI_GP:HJH9162238.1;Name=HJH9162238.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=O5D79_000674;product=ribosome assembly RNA-binding protein YhbY;protein_id=HJH9162238.1;transl_table=11 DALFDJ020000003.1 tpg gene 2789 3415 . + . ID=gene-O5D79_000675;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=O5D79_000675 DALFDJ020000003.1 Protein Homology CDS 2789 3415 . + 0 ID=cds-HJH9162239.1;Parent=gene-O5D79_000675;Dbxref=NCBI_GP:HJH9162239.1;Name=HJH9162239.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462208.1;locus_tag=O5D79_000675;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=HJH9162239.1;transl_table=11 DALFDJ020000003.1 tpg gene 3519 5453 . + . ID=gene-O5D79_000676;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=O5D79_000676 DALFDJ020000003.1 Protein Homology CDS 3519 5453 . + 0 ID=cds-HJH9162240.1;Parent=gene-O5D79_000676;Dbxref=NCBI_GP:HJH9162240.1;Name=HJH9162240.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=O5D79_000676;product=ATP-dependent zinc metalloprotease FtsH;protein_id=HJH9162240.1;transl_table=11 DALFDJ020000003.1 tpg gene 5557 6405 . + . ID=gene-O5D79_000677;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=O5D79_000677 DALFDJ020000003.1 Protein Homology CDS 5557 6405 . + 0 ID=cds-HJH9162241.1;Parent=gene-O5D79_000677;Dbxref=NCBI_GP:HJH9162241.1;Name=HJH9162241.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462206.1;locus_tag=O5D79_000677;product=dihydropteroate synthase;protein_id=HJH9162241.1;transl_table=11 DALFDJ020000003.1 tpg gene 6398 7735 . + . ID=gene-O5D79_000678;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=O5D79_000678 DALFDJ020000003.1 Protein Homology CDS 6398 7735 . + 0 ID=cds-HJH9162242.1;Parent=gene-O5D79_000678;Dbxref=NCBI_GP:HJH9162242.1;Name=HJH9162242.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462205.1;locus_tag=O5D79_000678;product=phosphoglucosamine mutase;protein_id=HJH9162242.1;transl_table=11 DALFDJ020000003.1 tpg gene 7958 8290 . + . ID=gene-O5D79_000679;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=O5D79_000679 DALFDJ020000003.1 Protein Homology CDS 7958 8290 . + 0 ID=cds-HJH9162243.1;Parent=gene-O5D79_000679;Dbxref=NCBI_GP:HJH9162243.1;Name=HJH9162243.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=O5D79_000679;product=preprotein translocase subunit SecG;protein_id=HJH9162243.1;transl_table=11 DALFDJ020000003.1 tpg gene 8304 8390 . + . ID=gene-O5D79_000680;Name=O5D79_000680;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_000680 DALFDJ020000003.1 tRNAscan-SE tRNA 8304 8390 . + . ID=rna-O5D79_000680;Parent=gene-O5D79_000680;anticodon=(pos:8338..8340);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_000680;product=tRNA-Leu DALFDJ020000003.1 tRNAscan-SE exon 8304 8390 . + . ID=exon-O5D79_000680-1;Parent=rna-O5D79_000680;anticodon=(pos:8338..8340);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_000680;product=tRNA-Leu DALFDJ020000003.1 tpg gene 8588 9931 . - . ID=gene-O5D79_000681;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=O5D79_000681 DALFDJ020000003.1 Protein Homology CDS 8588 9931 . - 0 ID=cds-HJH9162244.1;Parent=gene-O5D79_000681;Dbxref=NCBI_GP:HJH9162244.1;Name=HJH9162244.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=O5D79_000681;product=argininosuccinate synthase;protein_id=HJH9162244.1;transl_table=11 DALFDJ020000003.1 tpg gene 10275 10351 . + . ID=gene-O5D79_000682;Name=O5D79_000682;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_000682 DALFDJ020000003.1 tRNAscan-SE tRNA 10275 10351 . + . ID=rna-O5D79_000682;Parent=gene-O5D79_000682;anticodon=(pos:10309..10311);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_000682;product=tRNA-Met DALFDJ020000003.1 tRNAscan-SE exon 10275 10351 . + . ID=exon-O5D79_000682-1;Parent=rna-O5D79_000682;anticodon=(pos:10309..10311);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_000682;product=tRNA-Met DALFDJ020000003.1 tpg gene 10559 11011 . + . ID=gene-O5D79_000683;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=O5D79_000683 DALFDJ020000003.1 Protein Homology CDS 10559 11011 . + 0 ID=cds-HJH9162245.1;Parent=gene-O5D79_000683;Dbxref=NCBI_GP:HJH9162245.1;Name=HJH9162245.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=O5D79_000683;product=ribosome maturation factor RimP;protein_id=HJH9162245.1;transl_table=11 DALFDJ020000003.1 tpg gene 11039 12541 . + . ID=gene-O5D79_000684;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=O5D79_000684 DALFDJ020000003.1 Protein Homology CDS 11039 12541 . + 0 ID=cds-HJH9162246.1;Parent=gene-O5D79_000684;Dbxref=NCBI_GP:HJH9162246.1;Name=HJH9162246.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=O5D79_000684;product=transcription termination factor NusA;protein_id=HJH9162246.1;transl_table=11 DALFDJ020000003.1 tpg gene 12566 15244 . + . ID=gene-O5D79_000685;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=O5D79_000685 DALFDJ020000003.1 Protein Homology CDS 12566 15244 . + 0 ID=cds-HJH9162247.1;Parent=gene-O5D79_000685;Dbxref=NCBI_GP:HJH9162247.1;Name=HJH9162247.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462199.1;locus_tag=O5D79_000685;product=translation initiation factor IF-2;protein_id=HJH9162247.1;transl_table=11 DALFDJ020000003.1 tpg gene 15465 15866 . + . ID=gene-O5D79_000686;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=O5D79_000686 DALFDJ020000003.1 Protein Homology CDS 15465 15866 . + 0 ID=cds-HJH9162248.1;Parent=gene-O5D79_000686;Dbxref=NCBI_GP:HJH9162248.1;Name=HJH9162248.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=O5D79_000686;product=30S ribosome-binding factor RbfA;protein_id=HJH9162248.1;transl_table=11 DALFDJ020000003.1 tpg gene 15866 16810 . + . ID=gene-O5D79_000687;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=O5D79_000687 DALFDJ020000003.1 Protein Homology CDS 15866 16810 . + 0 ID=cds-HJH9162249.1;Parent=gene-O5D79_000687;Dbxref=NCBI_GP:HJH9162249.1;Name=HJH9162249.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462197.1;locus_tag=O5D79_000687;product=tRNA pseudouridine(55) synthase TruB;protein_id=HJH9162249.1;transl_table=11 DALFDJ020000003.1 tpg gene 16961 17230 . + . ID=gene-O5D79_000688;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=O5D79_000688 DALFDJ020000003.1 Protein Homology CDS 16961 17230 . + 0 ID=cds-HJH9162250.1;Parent=gene-O5D79_000688;Dbxref=NCBI_GP:HJH9162250.1;Name=HJH9162250.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=O5D79_000688;product=30S ribosomal protein S15;protein_id=HJH9162250.1;transl_table=11 DALFDJ020000003.1 tpg gene 17472 19607 . + . ID=gene-O5D79_000689;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=O5D79_000689 DALFDJ020000003.1 Protein Homology CDS 17472 19607 . + 0 ID=cds-HJH9162251.1;Parent=gene-O5D79_000689;Dbxref=NCBI_GP:HJH9162251.1;Name=HJH9162251.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462195.1;locus_tag=O5D79_000689;product=polyribonucleotide nucleotidyltransferase;protein_id=HJH9162251.1;transl_table=11 DALFDJ020000003.1 tpg gene 19717 20601 . + . ID=gene-O5D79_000690;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=O5D79_000690 DALFDJ020000003.1 Protein Homology CDS 19717 20601 . + 0 ID=cds-HJH9162252.1;Parent=gene-O5D79_000690;Dbxref=NCBI_GP:HJH9162252.1;Name=HJH9162252.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=O5D79_000690;product=lipoprotein NlpI;protein_id=HJH9162252.1;transl_table=11 DALFDJ020000003.1 tpg gene 20707 20787 . + . ID=gene-O5D79_000691;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=O5D79_000691 DALFDJ020000003.1 Protein Homology CDS 20707 20787 . + 0 ID=cds-HJH9162253.1;Parent=gene-O5D79_000691;Dbxref=NCBI_GP:HJH9162253.1;Name=HJH9162253.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=O5D79_000691;product=protein YrbN;protein_id=HJH9162253.1;transl_table=11 DALFDJ020000003.1 tpg gene 20780 22669 . + . ID=gene-O5D79_000692;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=O5D79_000692 DALFDJ020000003.1 Protein Homology CDS 20780 22669 . + 0 ID=cds-HJH9162254.1;Parent=gene-O5D79_000692;Dbxref=NCBI_GP:HJH9162254.1;Name=HJH9162254.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312070.2;locus_tag=O5D79_000692;product=ATP-dependent RNA helicase DeaD;protein_id=HJH9162254.1;transl_table=11 DALFDJ020000003.1 tpg gene 22823 24067 . + . ID=gene-O5D79_000693;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=O5D79_000693 DALFDJ020000003.1 Protein Homology CDS 22823 24067 . + 0 ID=cds-HJH9162255.1;Parent=gene-O5D79_000693;Dbxref=NCBI_GP:HJH9162255.1;Name=HJH9162255.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462192.1;locus_tag=O5D79_000693;product=tryptophan permease;protein_id=HJH9162255.1;transl_table=11 DALFDJ020000003.1 tpg gene 24158 25165 . - . ID=gene-O5D79_000694;Name=O5D79_000694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000694 DALFDJ020000003.1 Protein Homology CDS 24158 25165 . - 0 ID=cds-HJH9162256.1;Parent=gene-O5D79_000694;Dbxref=NCBI_GP:HJH9162256.1;Name=HJH9162256.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462189.1;locus_tag=O5D79_000694;product=luciferase-like monooxygenase;protein_id=HJH9162256.1;transl_table=11 DALFDJ020000003.1 tpg gene 25343 26221 . - . ID=gene-O5D79_000695;Name=O5D79_000695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000695 DALFDJ020000003.1 Protein Homology CDS 25343 26221 . - 0 ID=cds-HJH9162257.1;Parent=gene-O5D79_000695;Dbxref=NCBI_GP:HJH9162257.1;Name=HJH9162257.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312067.2;locus_tag=O5D79_000695;product=U32 family peptidase;protein_id=HJH9162257.1;transl_table=11 DALFDJ020000003.1 tpg gene 26230 27225 . - . ID=gene-O5D79_000696;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=O5D79_000696 DALFDJ020000003.1 Protein Homology CDS 26230 27225 . - 0 ID=cds-HJH9162258.1;Parent=gene-O5D79_000696;Dbxref=NCBI_GP:HJH9162258.1;Name=HJH9162258.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=O5D79_000696;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=HJH9162258.1;transl_table=11 DALFDJ020000003.1 tpg gene 27442 27966 . + . ID=gene-O5D79_000697;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=O5D79_000697 DALFDJ020000003.1 Protein Homology CDS 27442 27966 . + 0 ID=cds-HJH9162259.1;Parent=gene-O5D79_000697;Dbxref=NCBI_GP:HJH9162259.1;Name=HJH9162259.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462186.1;locus_tag=O5D79_000697;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=HJH9162259.1;transl_table=11 DALFDJ020000003.1 tpg gene 27960 28463 . + . ID=gene-O5D79_000698;Name=O5D79_000698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000698 DALFDJ020000003.1 Protein Homology CDS 27960 28463 . + 0 ID=cds-HJH9162260.1;Parent=gene-O5D79_000698;Dbxref=NCBI_GP:HJH9162260.1;Name=HJH9162260.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462185.1;locus_tag=O5D79_000698;product=GNAT family N-acetyltransferase;protein_id=HJH9162260.1;transl_table=11 DALFDJ020000003.1 tpg gene 28450 28767 . - . ID=gene-O5D79_000699;Name=O5D79_000699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000699 DALFDJ020000003.1 Protein Homology CDS 28450 28767 . - 0 ID=cds-HJH9162261.1;Parent=gene-O5D79_000699;Dbxref=NCBI_GP:HJH9162261.1;Name=HJH9162261.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462184.3;locus_tag=O5D79_000699;product=GIY-YIG nuclease family protein;protein_id=HJH9162261.1;transl_table=11 DALFDJ020000003.1 tpg gene 28805 29248 . + . ID=gene-O5D79_000700;Name=O5D79_000700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000700 DALFDJ020000003.1 Protein Homology CDS 28805 29248 . + 0 ID=cds-HJH9162262.1;Parent=gene-O5D79_000700;Dbxref=NCBI_GP:HJH9162262.1;Name=HJH9162262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462183.1;locus_tag=O5D79_000700;product=YhbP family protein;protein_id=HJH9162262.1;transl_table=11 DALFDJ020000003.1 tpg gene 29228 29746 . - . ID=gene-O5D79_000701;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=O5D79_000701 DALFDJ020000003.1 Protein Homology CDS 29228 29746 . - 0 ID=cds-HJH9162263.1;Parent=gene-O5D79_000701;Dbxref=NCBI_GP:HJH9162263.1;Name=HJH9162263.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462182.1;locus_tag=O5D79_000701;product=protein/nucleic acid deglycase;protein_id=HJH9162263.1;transl_table=11 DALFDJ020000003.1 tpg gene 29877 30512 . + . ID=gene-O5D79_000702;Name=O5D79_000702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000702 DALFDJ020000003.1 Protein Homology CDS 29877 30512 . + 0 ID=cds-HJH9162264.1;Parent=gene-O5D79_000702;Dbxref=NCBI_GP:HJH9162264.1;Name=HJH9162264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084527.1;locus_tag=O5D79_000702;product=NAD(P)H-binding protein;protein_id=HJH9162264.1;transl_table=11 DALFDJ020000003.1 tpg gene 30579 31154 . - . ID=gene-O5D79_000703;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=O5D79_000703 DALFDJ020000003.1 Protein Homology CDS 30579 31154 . - 0 ID=cds-HJH9162265.1;Parent=gene-O5D79_000703;Dbxref=NCBI_GP:HJH9162265.1;Name=HJH9162265.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462180.1;locus_tag=O5D79_000703;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=HJH9162265.1;transl_table=11 DALFDJ020000003.1 tpg gene 31164 31754 . - . ID=gene-O5D79_000704;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=O5D79_000704 DALFDJ020000003.1 Protein Homology CDS 31164 31754 . - 0 ID=cds-HJH9162266.1;Parent=gene-O5D79_000704;Dbxref=NCBI_GP:HJH9162266.1;Name=HJH9162266.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462179.1;locus_tag=O5D79_000704;product=DnaA initiator-associating protein DiaA;protein_id=HJH9162266.1;transl_table=11 DALFDJ020000003.1 tpg gene 31776 32171 . - . ID=gene-O5D79_000705;Name=O5D79_000705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000705 DALFDJ020000003.1 Protein Homology CDS 31776 32171 . - 0 ID=cds-HJH9162267.1;Parent=gene-O5D79_000705;Dbxref=NCBI_GP:HJH9162267.1;Name=HJH9162267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462178.1;locus_tag=O5D79_000705;product=YraN family protein;protein_id=HJH9162267.1;transl_table=11 DALFDJ020000003.1 tpg gene 32129 34171 . - . ID=gene-O5D79_000706;Name=O5D79_000706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000706 DALFDJ020000003.1 Protein Homology CDS 32129 34171 . - 0 ID=cds-HJH9162268.1;Parent=gene-O5D79_000706;Dbxref=NCBI_GP:HJH9162268.1;Name=HJH9162268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462177.1;locus_tag=O5D79_000706;product=penicillin-binding protein activator;protein_id=HJH9162268.1;transl_table=11 DALFDJ020000003.1 tpg gene 34235 35098 . + . ID=gene-O5D79_000707;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=O5D79_000707 DALFDJ020000003.1 Protein Homology CDS 34235 35098 . + 0 ID=cds-HJH9162269.1;Parent=gene-O5D79_000707;Dbxref=NCBI_GP:HJH9162269.1;Name=HJH9162269.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=O5D79_000707;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=HJH9162269.1;transl_table=11 DALFDJ020000003.1 tpg gene 35256 36029 . - . ID=gene-O5D79_000708;Name=O5D79_000708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000708 DALFDJ020000003.1 Protein Homology CDS 35256 36029 . - 0 ID=cds-HJH9162270.1;Parent=gene-O5D79_000708;Dbxref=NCBI_GP:HJH9162270.1;Name=HJH9162270.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462175.1;locus_tag=O5D79_000708;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=HJH9162270.1;transl_table=11 DALFDJ020000003.1 tpg gene 36140 37183 . - . ID=gene-O5D79_000709;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=O5D79_000709 DALFDJ020000003.1 Protein Homology CDS 36140 37183 . - 0 ID=cds-HJH9162271.1;Parent=gene-O5D79_000709;Dbxref=NCBI_GP:HJH9162271.1;Name=HJH9162271.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462174.1;locus_tag=O5D79_000709;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=HJH9162271.1;transl_table=11 DALFDJ020000003.1 tpg gene 37227 38600 . - . ID=gene-O5D79_000710;Name=O5D79_000710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000710 DALFDJ020000003.1 Protein Homology CDS 37227 38600 . - 0 ID=cds-HJH9162272.1;Parent=gene-O5D79_000710;Dbxref=NCBI_GP:HJH9162272.1;Name=HJH9162272.1;Ontology_term=GO:0009401,GO:0015796,GO:0015577,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=galactitol transmembrane transporter activity|0015577||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,galactitol transmembrane transport|0015796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462173.1;locus_tag=O5D79_000710;product=galactitol-specific PTS transporter subunit IIC;protein_id=HJH9162272.1;transl_table=11 DALFDJ020000003.1 tpg gene 38604 38888 . - . ID=gene-O5D79_000711;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=O5D79_000711 DALFDJ020000003.1 Protein Homology CDS 38604 38888 . - 0 ID=cds-HJH9162273.1;Parent=gene-O5D79_000711;Dbxref=NCBI_GP:HJH9162273.1;Name=HJH9162273.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462172.1;locus_tag=O5D79_000711;product=PTS galactitol transporter subunit IIB;protein_id=HJH9162273.1;transl_table=11 DALFDJ020000003.1 tpg gene 38919 39383 . - . ID=gene-O5D79_000712;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=O5D79_000712 DALFDJ020000003.1 Protein Homology CDS 38919 39383 . - 0 ID=cds-HJH9162274.1;Parent=gene-O5D79_000712;Dbxref=NCBI_GP:HJH9162274.1;Name=HJH9162274.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462171.1;locus_tag=O5D79_000712;product=PTS galactitol transporter subunit IIA;protein_id=HJH9162274.1;transl_table=11 DALFDJ020000003.1 tpg gene 39398 40669 . - . ID=gene-O5D79_000713;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=O5D79_000713 DALFDJ020000003.1 Protein Homology CDS 39398 40669 . - 0 ID=cds-HJH9162275.1;Parent=gene-O5D79_000713;Dbxref=NCBI_GP:HJH9162275.1;Name=HJH9162275.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462170.1;locus_tag=O5D79_000713;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=HJH9162275.1;transl_table=11 DALFDJ020000003.1 tpg gene 40789 41643 . - . ID=gene-O5D79_000714;Name=O5D79_000714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000714 DALFDJ020000003.1 Protein Homology CDS 40789 41643 . - 0 ID=cds-HJH9162276.1;Parent=gene-O5D79_000714;Dbxref=NCBI_GP:HJH9162276.1;Name=HJH9162276.1;Ontology_term=GO:0005975,GO:0008270,GO:0009025;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462166.1;locus_tag=O5D79_000714;product=tagatose bisphosphate family class II aldolase;protein_id=HJH9162276.1;transl_table=11 DALFDJ020000003.1 tpg gene 41901 43472 . - . ID=gene-O5D79_000715;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=O5D79_000715 DALFDJ020000003.1 Protein Homology CDS 41901 43472 . - 0 ID=cds-HJH9162277.1;Parent=gene-O5D79_000715;Dbxref=NCBI_GP:HJH9162277.1;Name=HJH9162277.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462163.1;locus_tag=O5D79_000715;product=galactarate dehydratase;protein_id=HJH9162277.1;transl_table=11 DALFDJ020000003.1 tpg gene 44002 44772 . + . ID=gene-O5D79_000716;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=O5D79_000716 DALFDJ020000003.1 Protein Homology CDS 44002 44772 . + 0 ID=cds-HJH9162278.1;Parent=gene-O5D79_000716;Dbxref=NCBI_GP:HJH9162278.1;Name=HJH9162278.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462162.1;locus_tag=O5D79_000716;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=HJH9162278.1;transl_table=11 DALFDJ020000003.1 tpg gene 44798 45688 . + . ID=gene-O5D79_000717;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=O5D79_000717 DALFDJ020000003.1 Protein Homology CDS 44798 45688 . + 0 ID=cds-HJH9162279.1;Parent=gene-O5D79_000717;Dbxref=NCBI_GP:HJH9162279.1;Name=HJH9162279.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462161.1;locus_tag=O5D79_000717;product=2-hydroxy-3-oxopropionate reductase;protein_id=HJH9162279.1;transl_table=11 DALFDJ020000003.1 tpg gene 45786 46931 . + . ID=gene-O5D79_000718;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=O5D79_000718 DALFDJ020000003.1 Protein Homology CDS 45786 46931 . + 0 ID=cds-HJH9162280.1;Parent=gene-O5D79_000718;Dbxref=NCBI_GP:HJH9162280.1;Name=HJH9162280.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462160.1;locus_tag=O5D79_000718;product=glycerate 2-kinase;protein_id=HJH9162280.1;transl_table=11 DALFDJ020000003.1 tpg gene 46964 47338 . + . ID=gene-O5D79_000719;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=O5D79_000719 DALFDJ020000003.1 cmsearch RNase_P_RNA 46964 47338 . + . ID=rna-O5D79_000719;Parent=gene-O5D79_000719;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_000719;product=RNase P RNA component class A DALFDJ020000003.1 cmsearch exon 46964 47338 . + . ID=exon-O5D79_000719-1;Parent=rna-O5D79_000719;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_000719;product=RNase P RNA component class A DALFDJ020000003.1 tpg gene 48741 49679 . + . ID=gene-O5D79_000720;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=O5D79_000720 DALFDJ020000003.1 Protein Homology CDS 48741 49679 . + 0 ID=cds-HJH9162281.1;Parent=gene-O5D79_000720;Dbxref=NCBI_GP:HJH9162281.1;Name=HJH9162281.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462159.1;locus_tag=O5D79_000720;product=transcriptional regulator TdcA;protein_id=HJH9162281.1;transl_table=11 DALFDJ020000003.1 tpg gene 49777 50766 . + . ID=gene-O5D79_000721;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=O5D79_000721 DALFDJ020000003.1 Protein Homology CDS 49777 50766 . + 0 ID=cds-HJH9162282.1;Parent=gene-O5D79_000721;Dbxref=NCBI_GP:HJH9162282.1;Name=HJH9162282.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462158.1;locus_tag=O5D79_000721;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=HJH9162282.1;transl_table=11 DALFDJ020000003.1 tpg gene 50787 52118 . + . ID=gene-O5D79_000722;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=O5D79_000722 DALFDJ020000003.1 Protein Homology CDS 50787 52118 . + 0 ID=cds-HJH9162283.1;Parent=gene-O5D79_000722;Dbxref=NCBI_GP:HJH9162283.1;Name=HJH9162283.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=O5D79_000722;product=threonine/serine transporter TdcC;protein_id=HJH9162283.1;transl_table=11 DALFDJ020000003.1 tpg gene 52184 53392 . + . ID=gene-O5D79_000723;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=O5D79_000723 DALFDJ020000003.1 Protein Homology CDS 52184 53392 . + 0 ID=cds-HJH9162284.1;Parent=gene-O5D79_000723;Dbxref=NCBI_GP:HJH9162284.1;Name=HJH9162284.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462156.1;locus_tag=O5D79_000723;product=propionate kinase;protein_id=HJH9162284.1;transl_table=11 DALFDJ020000003.1 tpg gene 53426 55720 . + . ID=gene-O5D79_000724;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=O5D79_000724 DALFDJ020000003.1 Protein Homology CDS 53426 55720 . + 0 ID=cds-HJH9162285.1;Parent=gene-O5D79_000724;Dbxref=NCBI_GP:HJH9162285.1;Name=HJH9162285.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462155.1;locus_tag=O5D79_000724;product=formate C-acetyltransferase;protein_id=HJH9162285.1;transl_table=11 DALFDJ020000003.1 tpg gene 55790 57154 . + . ID=gene-O5D79_000725;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=O5D79_000725 DALFDJ020000003.1 Protein Homology CDS 55790 57154 . + 0 ID=cds-HJH9162286.1;Parent=gene-O5D79_000725;Dbxref=NCBI_GP:HJH9162286.1;Name=HJH9162286.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462154.1;locus_tag=O5D79_000725;product=L-serine ammonia-lyase;protein_id=HJH9162286.1;transl_table=11 DALFDJ020000003.1 tpg gene 57470 58801 . + . ID=gene-O5D79_000726;Name=O5D79_000726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000726 DALFDJ020000003.1 Protein Homology CDS 57470 58801 . + 0 ID=cds-HJH9162287.1;Parent=gene-O5D79_000726;Dbxref=NCBI_GP:HJH9162287.1;Name=HJH9162287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=O5D79_000726;product=amino acid permease;protein_id=HJH9162287.1;transl_table=11 DALFDJ020000003.1 tpg gene 58827 60137 . + . ID=gene-O5D79_000727;Name=O5D79_000727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000727 DALFDJ020000003.1 Protein Homology CDS 58827 60137 . + 0 ID=cds-HJH9162288.1;Parent=gene-O5D79_000727;Dbxref=NCBI_GP:HJH9162288.1;Name=HJH9162288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675866.1;locus_tag=O5D79_000727;product=serine dehydratase subunit alpha family protein;protein_id=HJH9162288.1;transl_table=11 DALFDJ020000003.1 tpg gene 60250 60414 . - . ID=gene-O5D79_000728;Name=O5D79_000728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000728 DALFDJ020000003.1 Protein Homology CDS 60250 60414 . - 0 ID=cds-HJH9162289.1;Parent=gene-O5D79_000728;Dbxref=NCBI_GP:HJH9162289.1;Name=HJH9162289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462151.1;locus_tag=O5D79_000728;product=hypothetical protein;protein_id=HJH9162289.1;transl_table=11 DALFDJ020000003.1 tpg gene 60438 61139 . - . ID=gene-O5D79_000729;Name=O5D79_000729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000729 DALFDJ020000003.1 Protein Homology CDS 60438 61139 . - 0 ID=cds-HJH9162290.1;Parent=gene-O5D79_000729;Dbxref=NCBI_GP:HJH9162290.1;Name=HJH9162290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462150.1;locus_tag=O5D79_000729;product=pirin family protein;protein_id=HJH9162290.1;transl_table=11 DALFDJ020000003.1 tpg gene 61244 62140 . + . ID=gene-O5D79_000730;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=O5D79_000730 DALFDJ020000003.1 Protein Homology CDS 61244 62140 . + 0 ID=cds-HJH9162291.1;Parent=gene-O5D79_000730;Dbxref=NCBI_GP:HJH9162291.1;Name=HJH9162291.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462149.1;locus_tag=O5D79_000730;product=DNA-binding transcriptional regulator YhaJ;protein_id=HJH9162291.1;transl_table=11 DALFDJ020000003.1 tpg gene 62179 62544 . - . ID=gene-O5D79_000731;Name=O5D79_000731;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000731 DALFDJ020000003.1 Protein Homology CDS 62179 62544 . - 0 ID=cds-HJH9162292.1;Parent=gene-O5D79_000731;Dbxref=NCBI_GP:HJH9162292.1;Name=HJH9162292.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462148.1;locus_tag=O5D79_000731;product=DUF805 domain-containing protein;protein_id=HJH9162292.1;transl_table=11 DALFDJ020000003.1 tpg gene 62668 63654 . - . ID=gene-O5D79_000732;Name=O5D79_000732;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000732 DALFDJ020000003.1 Protein Homology CDS 62668 63654 . - 0 ID=cds-HJH9162293.1;Parent=gene-O5D79_000732;Dbxref=NCBI_GP:HJH9162293.1;Name=HJH9162293.1;Ontology_term=GO:0004364,GO:0016491;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462147.1;locus_tag=O5D79_000732;product=glutathione S-transferase family protein;protein_id=HJH9162293.1;transl_table=11 DALFDJ020000003.1 tpg gene 63722 64114 . - . ID=gene-O5D79_000733;Name=O5D79_000733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000733 DALFDJ020000003.1 Protein Homology CDS 63722 64114 . - 0 ID=cds-HJH9162294.1;Parent=gene-O5D79_000733;Dbxref=NCBI_GP:HJH9162294.1;Name=HJH9162294.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=O5D79_000733;product=DoxX family protein;protein_id=HJH9162294.1;transl_table=11 DALFDJ020000003.1 tpg gene 64362 64661 . - . ID=gene-O5D79_000734;Name=O5D79_000734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000734 DALFDJ020000003.1 Protein Homology CDS 64362 64661 . - 0 ID=cds-HJH9162295.1;Parent=gene-O5D79_000734;Dbxref=NCBI_GP:HJH9162295.1;Name=HJH9162295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462145.1;locus_tag=O5D79_000734;product=YqjK-like family protein;protein_id=HJH9162295.1;transl_table=11 DALFDJ020000003.1 tpg gene 64658 65056 . - . ID=gene-O5D79_000735;Name=O5D79_000735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000735 DALFDJ020000003.1 Protein Homology CDS 64658 65056 . - 0 ID=cds-HJH9162296.1;Parent=gene-O5D79_000735;Dbxref=NCBI_GP:HJH9162296.1;Name=HJH9162296.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462144.1;locus_tag=O5D79_000735;product=phage holin family protein;protein_id=HJH9162296.1;transl_table=11 DALFDJ020000003.1 tpg gene 65059 65364 . - . ID=gene-O5D79_000736;Name=O5D79_000736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000736 DALFDJ020000003.1 Protein Homology CDS 65059 65364 . - 0 ID=cds-HJH9162297.1;Parent=gene-O5D79_000736;Dbxref=NCBI_GP:HJH9162297.1;Name=HJH9162297.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462143.1;locus_tag=O5D79_000736;product=DUF883 family protein;protein_id=HJH9162297.1;transl_table=11 DALFDJ020000003.1 tpg gene 65406 65774 . - . ID=gene-O5D79_000737;Name=O5D79_000737;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000737 DALFDJ020000003.1 Protein Homology CDS 65406 65774 . - 0 ID=cds-HJH9162298.1;Parent=gene-O5D79_000737;Dbxref=NCBI_GP:HJH9162298.1;Name=HJH9162298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462142.1;locus_tag=O5D79_000737;product=DUF1090 domain-containing protein;protein_id=HJH9162298.1;transl_table=11 DALFDJ020000003.1 tpg gene 65919 66302 . - . ID=gene-O5D79_000738;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=O5D79_000738 DALFDJ020000003.1 Protein Homology CDS 65919 66302 . - 0 ID=cds-HJH9162299.1;Parent=gene-O5D79_000738;Dbxref=NCBI_GP:HJH9162299.1;Name=HJH9162299.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462141.1;locus_tag=O5D79_000738;product=EnvZ/OmpR regulon moderator MzrA;protein_id=HJH9162299.1;transl_table=11 DALFDJ020000003.1 tpg gene 66306 66968 . - . ID=gene-O5D79_000739;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=O5D79_000739 DALFDJ020000003.1 Protein Homology CDS 66306 66968 . - 0 ID=cds-HJH9162300.1;Parent=gene-O5D79_000739;Dbxref=NCBI_GP:HJH9162300.1;Name=HJH9162300.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462140.1;locus_tag=O5D79_000739;product=DedA family general envelope maintenance protein YqjA;protein_id=HJH9162300.1;transl_table=11 DALFDJ020000003.1 tpg gene 67418 68662 . - . ID=gene-O5D79_000740;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=O5D79_000740 DALFDJ020000003.1 Protein Homology CDS 67418 68662 . - 0 ID=cds-HJH9162301.1;Parent=gene-O5D79_000740;Dbxref=NCBI_GP:HJH9162301.1;Name=HJH9162301.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462139.1;locus_tag=O5D79_000740;product=serine/threonine transporter SstT;protein_id=HJH9162301.1;transl_table=11 DALFDJ020000003.1 tpg gene 68917 69885 . - . ID=gene-O5D79_000741;Name=O5D79_000741;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000741 DALFDJ020000003.1 Protein Homology CDS 68917 69885 . - 0 ID=cds-HJH9162302.1;Parent=gene-O5D79_000741;Dbxref=NCBI_GP:HJH9162302.1;Name=HJH9162302.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462138.1;locus_tag=O5D79_000741;product=TerC family protein;protein_id=HJH9162302.1;transl_table=11 DALFDJ020000003.1 tpg gene 70156 71154 . - . ID=gene-O5D79_000742;Name=O5D79_000742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000742 DALFDJ020000003.1 Protein Homology CDS 70156 71154 . - 0 ID=cds-HJH9162303.1;Parent=gene-O5D79_000742;Dbxref=NCBI_GP:HJH9162303.1;Name=HJH9162303.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462137.1;locus_tag=O5D79_000742;product=Gfo/Idh/MocA family protein;protein_id=HJH9162303.1;transl_table=11 DALFDJ020000003.1 tpg gene 71243 71935 . - . ID=gene-O5D79_000743;Name=O5D79_000743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000743 DALFDJ020000003.1 Protein Homology CDS 71243 71935 . - 0 ID=cds-HJH9162304.1;Parent=gene-O5D79_000743;Dbxref=NCBI_GP:HJH9162304.1;Name=HJH9162304.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462136.1;locus_tag=O5D79_000743;product=SanA/YdcF family protein;protein_id=HJH9162304.1;transl_table=11 DALFDJ020000003.1 tpg gene 72087 72584 . - . ID=gene-O5D79_000744;Name=O5D79_000744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000744 DALFDJ020000003.1 Protein Homology CDS 72087 72584 . - 0 ID=cds-HJH9162305.1;Parent=gene-O5D79_000744;Dbxref=NCBI_GP:HJH9162305.1;Name=HJH9162305.1;Ontology_term=GO:0006508,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462135.1;locus_tag=O5D79_000744;product=M48 family metallopeptidase;protein_id=HJH9162305.1;transl_table=11 DALFDJ020000003.1 tpg gene 72670 73806 . + . ID=gene-O5D79_000745;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=O5D79_000745 DALFDJ020000003.1 Protein Homology CDS 72670 73806 . + 0 ID=cds-HJH9162306.1;Parent=gene-O5D79_000745;Dbxref=NCBI_GP:HJH9162306.1;Name=HJH9162306.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462134.1;locus_tag=O5D79_000745;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=HJH9162306.1;transl_table=11 DALFDJ020000003.1 tpg gene 73887 75905 . - . ID=gene-O5D79_000746;Name=O5D79_000746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000746 DALFDJ020000003.1 Protein Homology CDS 73887 75905 . - 0 ID=cds-HJH9162307.1;Parent=gene-O5D79_000746;Dbxref=NCBI_GP:HJH9162307.1;Name=HJH9162307.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462133.1;locus_tag=O5D79_000746;product=FAD-dependent oxidoreductase;protein_id=HJH9162307.1;transl_table=11 DALFDJ020000003.1 tpg gene 76076 77455 . - . ID=gene-O5D79_000747;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=O5D79_000747 DALFDJ020000003.1 Protein Homology CDS 76076 77455 . - 0 ID=cds-HJH9162308.1;Parent=gene-O5D79_000747;Dbxref=NCBI_GP:HJH9162308.1;Name=HJH9162308.1;Ontology_term=GO:0009447,GO:0030170,GO:0033094;gbkey=CDS;gene=ygjG;go_function=pyridoxal phosphate binding|0030170||IEA,putrescine--2-oxoglutarate transaminase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894971.1;locus_tag=O5D79_000747;product=putrescine aminotransferase;protein_id=HJH9162308.1;transl_table=11 DALFDJ020000003.1 tpg gene 77885 79405 . + . ID=gene-O5D79_000748;Name=O5D79_000748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000748 DALFDJ020000003.1 Protein Homology CDS 77885 79405 . + 0 ID=cds-HJH9162309.1;Parent=gene-O5D79_000748;Dbxref=NCBI_GP:HJH9162309.1;Name=HJH9162309.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462131.1;locus_tag=O5D79_000748;product=methyl-accepting chemotaxis protein;protein_id=HJH9162309.1;transl_table=11 DALFDJ020000003.1 tpg gene 79793 81358 . + . ID=gene-O5D79_000749;Name=O5D79_000749;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000749 DALFDJ020000003.1 Protein Homology CDS 79793 81358 . + 0 ID=cds-HJH9162310.1;Parent=gene-O5D79_000749;Dbxref=NCBI_GP:HJH9162310.1;Name=HJH9162310.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462130.1;locus_tag=O5D79_000749;product=methyl-accepting chemotaxis protein;protein_id=HJH9162310.1;transl_table=11 DALFDJ020000003.1 tpg gene 81355 82002 . - . ID=gene-O5D79_000750;Name=O5D79_000750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000750 DALFDJ020000003.1 Protein Homology CDS 81355 82002 . - 0 ID=cds-HJH9162311.1;Parent=gene-O5D79_000750;Dbxref=NCBI_GP:HJH9162311.1;Name=HJH9162311.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462129.1;locus_tag=O5D79_000750;product=PadR family transcriptional regulator;protein_id=HJH9162311.1;transl_table=11 DALFDJ020000003.1 tpg gene 82234 83001 . + . ID=gene-O5D79_000751;Name=O5D79_000751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000751 DALFDJ020000003.1 Protein Homology CDS 82234 83001 . + 0 ID=cds-HJH9162312.1;Parent=gene-O5D79_000751;Dbxref=NCBI_GP:HJH9162312.1;Name=HJH9162312.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462128.1;locus_tag=O5D79_000751;product=siderophore-interacting protein;protein_id=HJH9162312.1;transl_table=11 DALFDJ020000003.1 tpg gene 83212 84249 . - . ID=gene-O5D79_000752;Name=O5D79_000752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000752 DALFDJ020000003.1 Protein Homology CDS 83212 84249 . - 0 ID=cds-HJH9162313.1;Parent=gene-O5D79_000752;Dbxref=NCBI_GP:HJH9162313.1;Name=HJH9162313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001145218.1;locus_tag=O5D79_000752;product=phage integrase;protein_id=HJH9162313.1;transl_table=11 DALFDJ020000003.1 tpg gene 84253 84819 . - . ID=gene-O5D79_000753;Name=O5D79_000753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000753 DALFDJ020000003.1 Protein Homology CDS 84253 84819 . - 0 ID=cds-HJH9162314.1;Parent=gene-O5D79_000753;Dbxref=NCBI_GP:HJH9162314.1;Name=HJH9162314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014885296.1;locus_tag=O5D79_000753;product=PH domain-containing protein;protein_id=HJH9162314.1;transl_table=11 DALFDJ020000003.1 tpg gene 84836 85417 . - . ID=gene-O5D79_000754;Name=O5D79_000754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000754 DALFDJ020000003.1 Protein Homology CDS 84836 85417 . - 0 ID=cds-HJH9162315.1;Parent=gene-O5D79_000754;Dbxref=NCBI_GP:HJH9162315.1;Name=HJH9162315.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000514631.1;locus_tag=O5D79_000754;product=phage repressor protein CI;protein_id=HJH9162315.1;transl_table=11 DALFDJ020000003.1 tpg gene 85558 85779 . + . ID=gene-O5D79_000755;Name=O5D79_000755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000755 DALFDJ020000003.1 Protein Homology CDS 85558 85779 . + 0 ID=cds-HJH9162316.1;Parent=gene-O5D79_000755;Dbxref=NCBI_GP:HJH9162316.1;Name=HJH9162316.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010836041.1;locus_tag=O5D79_000755;product=helix-turn-helix transcriptional regulator;protein_id=HJH9162316.1;transl_table=11 DALFDJ020000003.1 tpg gene 85810 86313 . + . ID=gene-O5D79_000756;Name=O5D79_000756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000756 DALFDJ020000003.1 Protein Homology CDS 85810 86313 . + 0 ID=cds-HJH9162317.1;Parent=gene-O5D79_000756;Dbxref=NCBI_GP:HJH9162317.1;Name=HJH9162317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000460876.1;locus_tag=O5D79_000756;product=phage regulatory CII family protein;protein_id=HJH9162317.1;transl_table=11 DALFDJ020000003.1 tpg gene 86323 86550 . + . ID=gene-O5D79_000757;Name=O5D79_000757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000757 DALFDJ020000003.1 Protein Homology CDS 86323 86550 . + 0 ID=cds-HJH9162318.1;Parent=gene-O5D79_000757;Dbxref=NCBI_GP:HJH9162318.1;Name=HJH9162318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000643374.1;locus_tag=O5D79_000757;product=phage filamentation protein Fil family protein;protein_id=HJH9162318.1;transl_table=11 DALFDJ020000003.1 tpg gene 86540 86965 . + . ID=gene-O5D79_000758;Name=O5D79_000758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000758 DALFDJ020000003.1 Protein Homology CDS 86540 86965 . + 0 ID=cds-HJH9162319.1;Parent=gene-O5D79_000758;Dbxref=NCBI_GP:HJH9162319.1;Name=HJH9162319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996837.1;locus_tag=O5D79_000758;product=hypothetical protein;protein_id=HJH9162319.1;transl_table=11 DALFDJ020000003.1 tpg gene 86965 87366 . + . ID=gene-O5D79_000759;Name=O5D79_000759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000759 DALFDJ020000003.1 Protein Homology CDS 86965 87366 . + 0 ID=cds-HJH9162320.1;Parent=gene-O5D79_000759;Dbxref=NCBI_GP:HJH9162320.1;Name=HJH9162320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738709.1;locus_tag=O5D79_000759;product=hypothetical protein;protein_id=HJH9162320.1;transl_table=11 DALFDJ020000003.1 tpg gene 87434 87667 . + . ID=gene-O5D79_000760;Name=O5D79_000760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000760 DALFDJ020000003.1 Protein Homology CDS 87434 87667 . + 0 ID=cds-HJH9162321.1;Parent=gene-O5D79_000760;Dbxref=NCBI_GP:HJH9162321.1;Name=HJH9162321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738711.1;locus_tag=O5D79_000760;product=DUF2732 family protein;protein_id=HJH9162321.1;transl_table=11 DALFDJ020000003.1 tpg gene 87658 88518 . + . ID=gene-O5D79_000761;Name=O5D79_000761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000761 DALFDJ020000003.1 Protein Homology CDS 87658 88518 . + 0 ID=cds-HJH9162322.1;Parent=gene-O5D79_000761;Dbxref=NCBI_GP:HJH9162322.1;Name=HJH9162322.1;Ontology_term=GO:0032775,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000279404.1;locus_tag=O5D79_000761;product=DNA adenine methylase;protein_id=HJH9162322.1;transl_table=11 DALFDJ020000003.1 tpg gene 88515 90536 . + . ID=gene-O5D79_000762;Name=O5D79_000762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000762 DALFDJ020000003.1 Protein Homology CDS 88515 90536 . + 0 ID=cds-HJH9162323.1;Parent=gene-O5D79_000762;Dbxref=NCBI_GP:HJH9162323.1;Name=HJH9162323.1;Ontology_term=GO:0006260,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000170880.1;locus_tag=O5D79_000762;product=replication endonuclease;protein_id=HJH9162323.1;transl_table=11 DALFDJ020000003.1 tpg gene 90656 90862 . + . ID=gene-O5D79_000763;Name=O5D79_000763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000763 DALFDJ020000003.1 Protein Homology CDS 90656 90862 . + 0 ID=cds-HJH9162324.1;Parent=gene-O5D79_000763;Dbxref=NCBI_GP:HJH9162324.1;Name=HJH9162324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000353144.1;locus_tag=O5D79_000763;product=hypothetical protein;protein_id=HJH9162324.1;transl_table=11 DALFDJ020000003.1 tpg gene 90836 91159 . - . ID=gene-O5D79_000764;Name=O5D79_000764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000764 DALFDJ020000003.1 Protein Homology CDS 90836 91159 . - 0 ID=cds-HJH9162325.1;Parent=gene-O5D79_000764;Dbxref=NCBI_GP:HJH9162325.1;Name=HJH9162325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001552031.1;locus_tag=O5D79_000764;product=ogr/Delta-like zinc finger family protein;protein_id=HJH9162325.1;transl_table=11 DALFDJ020000003.1 tpg gene 91156 92217 . - . ID=gene-O5D79_000765;Name=O5D79_000765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000765 DALFDJ020000003.1 Protein Homology CDS 91156 92217 . - 0 ID=cds-HJH9162326.1;Parent=gene-O5D79_000765;Dbxref=NCBI_GP:HJH9162326.1;Name=HJH9162326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038213.1;locus_tag=O5D79_000765;product=phage portal protein;protein_id=HJH9162326.1;transl_table=11 DALFDJ020000003.1 tpg gene 92214 93989 . - . ID=gene-O5D79_000766;Name=O5D79_000766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000766 DALFDJ020000003.1 Protein Homology CDS 92214 93989 . - 0 ID=cds-HJH9162327.1;Parent=gene-O5D79_000766;Dbxref=NCBI_GP:HJH9162327.1;Name=HJH9162327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151939.1;locus_tag=O5D79_000766;product=terminase large subunit domain-containing protein;protein_id=HJH9162327.1;transl_table=11 DALFDJ020000003.1 tpg gene 94150 94953 . + . ID=gene-O5D79_000767;Name=O5D79_000767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000767 DALFDJ020000003.1 Protein Homology CDS 94150 94953 . + 0 ID=cds-HJH9162328.1;Parent=gene-O5D79_000767;Dbxref=NCBI_GP:HJH9162328.1;Name=HJH9162328.1;Ontology_term=GO:0019069;gbkey=CDS;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018795.1;locus_tag=O5D79_000767;product=GPO family capsid scaffolding protein;protein_id=HJH9162328.1;transl_table=11 DALFDJ020000003.1 tpg gene 95015 96037 . + . ID=gene-O5D79_000768;Name=O5D79_000768;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000768 DALFDJ020000003.1 Protein Homology CDS 95015 96037 . + 0 ID=cds-HJH9162329.1;Parent=gene-O5D79_000768;Dbxref=NCBI_GP:HJH9162329.1;Name=HJH9162329.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000550496.1;locus_tag=O5D79_000768;product=phage major capsid protein%2C P2 family;protein_id=HJH9162329.1;transl_table=11 DALFDJ020000003.1 tpg gene 96041 96742 . + . ID=gene-O5D79_000769;Name=gpM;gbkey=Gene;gene=gpM;gene_biotype=protein_coding;locus_tag=O5D79_000769 DALFDJ020000003.1 Protein Homology CDS 96041 96742 . + 0 ID=cds-HJH9162330.1;Parent=gene-O5D79_000769;Dbxref=NCBI_GP:HJH9162330.1;Name=HJH9162330.1;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;gene=gpM;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218529.1;locus_tag=O5D79_000769;product=phage terminase small subunit;protein_id=HJH9162330.1;transl_table=11 DALFDJ020000003.1 tpg gene 96839 97291 . + . ID=gene-O5D79_000770;Name=O5D79_000770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000770 DALFDJ020000003.1 Protein Homology CDS 96839 97291 . + 0 ID=cds-HJH9162331.1;Parent=gene-O5D79_000770;Dbxref=NCBI_GP:HJH9162331.1;Name=HJH9162331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738723.1;locus_tag=O5D79_000770;product=head completion/stabilization protein;protein_id=HJH9162331.1;transl_table=11 DALFDJ020000003.1 tpg gene 97288 97794 . + . ID=gene-O5D79_000771;Name=O5D79_000771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000771 DALFDJ020000003.1 Protein Homology CDS 97288 97794 . + 0 ID=cds-HJH9162332.1;Parent=gene-O5D79_000771;Dbxref=NCBI_GP:HJH9162332.1;Name=HJH9162332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084219.1;locus_tag=O5D79_000771;product=phage tail protein;protein_id=HJH9162332.1;transl_table=11 DALFDJ020000003.1 tpg gene 97791 98498 . + . ID=gene-O5D79_000772;Name=O5D79_000772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000772 DALFDJ020000003.1 Protein Homology CDS 97791 98498 . + 0 ID=cds-HJH9162333.1;Parent=gene-O5D79_000772;Dbxref=NCBI_GP:HJH9162333.1;Name=HJH9162333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560077.1;locus_tag=O5D79_000772;product=hypothetical protein;protein_id=HJH9162333.1;transl_table=11 DALFDJ020000003.1 tpg gene 98495 99622 . + . ID=gene-O5D79_000773;Name=O5D79_000773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000773 DALFDJ020000003.1 Protein Homology CDS 98495 99622 . + 0 ID=cds-HJH9162334.1;Parent=gene-O5D79_000773;Dbxref=NCBI_GP:HJH9162334.1;Name=HJH9162334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748631.1;locus_tag=O5D79_000773;product=DUF2586 domain-containing protein;protein_id=HJH9162334.1;transl_table=11 DALFDJ020000003.1 tpg gene 99619 100074 . + . ID=gene-O5D79_000774;Name=O5D79_000774;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000774 DALFDJ020000003.1 Protein Homology CDS 99619 100074 . + 0 ID=cds-HJH9162335.1;Parent=gene-O5D79_000774;Dbxref=NCBI_GP:HJH9162335.1;Name=HJH9162335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000044254.1;locus_tag=O5D79_000774;product=phage protein;protein_id=HJH9162335.1;transl_table=11 DALFDJ020000003.1 tpg gene 100084 100377 . + . ID=gene-O5D79_000775;Name=O5D79_000775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000775 DALFDJ020000003.1 Protein Homology CDS 100084 100377 . + 0 ID=cds-HJH9162336.1;Parent=gene-O5D79_000775;Dbxref=NCBI_GP:HJH9162336.1;Name=HJH9162336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001154425.1;locus_tag=O5D79_000775;product=phage holin family protein;protein_id=HJH9162336.1;transl_table=11 DALFDJ020000003.1 tpg gene 100374 100715 . + . ID=gene-O5D79_000776;Name=O5D79_000776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000776 DALFDJ020000003.1 Protein Homology CDS 100374 100715 . + 0 ID=cds-HJH9162337.1;Parent=gene-O5D79_000776;Dbxref=NCBI_GP:HJH9162337.1;Name=HJH9162337.1;Ontology_term=GO:0006508,GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007710822.1;locus_tag=O5D79_000776;product=M15 family metallopeptidase;protein_id=HJH9162337.1;transl_table=11 DALFDJ020000003.1 tpg gene 100715 101047 . + . ID=gene-O5D79_000777;Name=O5D79_000777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000777 DALFDJ020000003.1 Protein Homology CDS 100715 101047 . + 0 ID=cds-HJH9162338.1;Parent=gene-O5D79_000777;Dbxref=NCBI_GP:HJH9162338.1;Name=HJH9162338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376378.1;locus_tag=O5D79_000777;product=hypothetical protein;protein_id=HJH9162338.1;transl_table=11 DALFDJ020000003.1 tpg gene 101019 101207 . + . ID=gene-O5D79_000778;Name=O5D79_000778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000778 DALFDJ020000003.1 Protein Homology CDS 101019 101207 . + 0 ID=cds-HJH9162339.1;Parent=gene-O5D79_000778;Dbxref=NCBI_GP:HJH9162339.1;Name=HJH9162339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669961.1;locus_tag=O5D79_000778;product=hypothetical protein;protein_id=HJH9162339.1;transl_table=11 DALFDJ020000003.1 tpg gene 101194 101451 . + . ID=gene-O5D79_000779;Name=O5D79_000779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000779 DALFDJ020000003.1 Protein Homology CDS 101194 101451 . + 0 ID=cds-HJH9162340.1;Parent=gene-O5D79_000779;Dbxref=NCBI_GP:HJH9162340.1;Name=HJH9162340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000435058.1;locus_tag=O5D79_000779;product=putative phage tail assembly chaperone;protein_id=HJH9162340.1;transl_table=11 DALFDJ020000003.1 tpg gene 101499 101642 . + . ID=gene-O5D79_000780;Name=O5D79_000780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000780 DALFDJ020000003.1 Protein Homology CDS 101499 101642 . + 0 ID=cds-HJH9162341.1;Parent=gene-O5D79_000780;Dbxref=NCBI_GP:HJH9162341.1;Name=HJH9162341.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046438.2;locus_tag=O5D79_000780;product=DUF6890 family protein;protein_id=HJH9162341.1;transl_table=11 DALFDJ020000003.1 tpg gene 101639 103609 . + . ID=gene-O5D79_000781;Name=O5D79_000781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000781 DALFDJ020000003.1 Protein Homology CDS 101639 103609 . + 0 ID=cds-HJH9162342.1;Parent=gene-O5D79_000781;Dbxref=NCBI_GP:HJH9162342.1;Name=HJH9162342.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000811087.1;locus_tag=O5D79_000781;product=phage tail tape measure protein;protein_id=HJH9162342.1;transl_table=11 DALFDJ020000003.1 tpg gene 103606 103935 . + . ID=gene-O5D79_000782;Name=O5D79_000782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000782 DALFDJ020000003.1 Protein Homology CDS 103606 103935 . + 0 ID=cds-HJH9162343.1;Parent=gene-O5D79_000782;Dbxref=NCBI_GP:HJH9162343.1;Name=HJH9162343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289823.1;locus_tag=O5D79_000782;product=DUF2590 family protein;protein_id=HJH9162343.1;transl_table=11 DALFDJ020000003.1 tpg gene 103932 105116 . + . ID=gene-O5D79_000783;Name=O5D79_000783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000783 DALFDJ020000003.1 Protein Homology CDS 103932 105116 . + 0 ID=cds-HJH9162344.1;Parent=gene-O5D79_000783;Dbxref=NCBI_GP:HJH9162344.1;Name=HJH9162344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507090.1;locus_tag=O5D79_000783;product=baseplate J/gp47 family protein;protein_id=HJH9162344.1;transl_table=11 DALFDJ020000003.1 tpg gene 105109 105696 . + . ID=gene-O5D79_000784;Name=O5D79_000784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000784 DALFDJ020000003.1 Protein Homology CDS 105109 105696 . + 0 ID=cds-HJH9162345.1;Parent=gene-O5D79_000784;Dbxref=NCBI_GP:HJH9162345.1;Name=HJH9162345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006772868.1;locus_tag=O5D79_000784;product=phage tail protein;protein_id=HJH9162345.1;transl_table=11 DALFDJ020000003.1 tpg gene 105706 107946 . + . ID=gene-O5D79_000785;Name=O5D79_000785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000785 DALFDJ020000003.1 Protein Homology CDS 105706 107946 . + 0 ID=cds-HJH9162346.1;Parent=gene-O5D79_000785;Dbxref=NCBI_GP:HJH9162346.1;Name=HJH9162346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534882.1;locus_tag=O5D79_000785;product=phage tail protein;protein_id=HJH9162346.1;transl_table=11 DALFDJ020000003.1 tpg gene 107916 108521 . + . ID=gene-O5D79_000786;Name=O5D79_000786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000786 DALFDJ020000003.1 Protein Homology CDS 107916 108521 . + 0 ID=cds-HJH9162347.1;Parent=gene-O5D79_000786;Dbxref=NCBI_GP:HJH9162347.1;Name=HJH9162347.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015701331.1;locus_tag=O5D79_000786;product=tail fiber assembly protein;protein_id=HJH9162347.1;transl_table=11 DALFDJ020000003.1 tpg gene 108511 109236 . + . ID=gene-O5D79_000787;Name=O5D79_000787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000787 DALFDJ020000003.1 Protein Homology CDS 108511 109236 . + 0 ID=cds-HJH9162348.1;Parent=gene-O5D79_000787;Dbxref=NCBI_GP:HJH9162348.1;Name=HJH9162348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000267957.1;locus_tag=O5D79_000787;product=hypothetical protein;protein_id=HJH9162348.1;transl_table=11 DALFDJ020000003.1 tpg gene 109208 109753 . + . ID=gene-O5D79_000788;Name=O5D79_000788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000788 DALFDJ020000003.1 Protein Homology CDS 109208 109753 . + 0 ID=cds-HJH9162349.1;Parent=gene-O5D79_000788;Dbxref=NCBI_GP:HJH9162349.1;Name=HJH9162349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000200792.1;locus_tag=O5D79_000788;product=hypothetical protein;protein_id=HJH9162349.1;transl_table=11 DALFDJ020000003.1 tpg gene 109753 111456 . + . ID=gene-O5D79_000789;Name=O5D79_000789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000789 DALFDJ020000003.1 Protein Homology CDS 109753 111456 . + 0 ID=cds-HJH9162350.1;Parent=gene-O5D79_000789;Dbxref=NCBI_GP:HJH9162350.1;Name=HJH9162350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534868.1;locus_tag=O5D79_000789;product=hypothetical protein;protein_id=HJH9162350.1;transl_table=11 DALFDJ020000003.1 tpg gene 112106 112729 . - . ID=gene-O5D79_000790;Name=O5D79_000790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000790 DALFDJ020000003.1 GeneMarkS-2+ CDS 112106 112729 . - 0 ID=cds-HJH9162351.1;Parent=gene-O5D79_000790;Dbxref=NCBI_GP:HJH9162351.1;Name=HJH9162351.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_000790;product=hypothetical protein;protein_id=HJH9162351.1;transl_table=11 DALFDJ020000003.1 tpg gene 112841 112916 . - . ID=gene-O5D79_000791;Name=O5D79_000791;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_000791 DALFDJ020000003.1 tRNAscan-SE tRNA 112841 112916 . - . ID=rna-O5D79_000791;Parent=gene-O5D79_000791;anticodon=(pos:complement(112881..112883));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_000791;product=tRNA-Ile DALFDJ020000003.1 tRNAscan-SE exon 112841 112916 . - . ID=exon-O5D79_000791-1;Parent=rna-O5D79_000791;anticodon=(pos:complement(112881..112883));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_000791;product=tRNA-Ile DALFDJ020000003.1 tpg gene 113042 113548 . + . ID=gene-O5D79_000792;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=O5D79_000792 DALFDJ020000003.1 Protein Homology CDS 113042 113548 . + 0 ID=cds-HJH9162352.1;Parent=gene-O5D79_000792;Dbxref=NCBI_GP:HJH9162352.1;Name=HJH9162352.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462127.1;locus_tag=O5D79_000792;product=G/U mismatch-specific DNA glycosylase;protein_id=HJH9162352.1;transl_table=11 DALFDJ020000003.1 tpg gene 113672 115654 . - . ID=gene-O5D79_000793;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=O5D79_000793 DALFDJ020000003.1 Protein Homology CDS 113672 115654 . - 0 ID=cds-HJH9162353.1;Parent=gene-O5D79_000793;Dbxref=NCBI_GP:HJH9162353.1;Name=HJH9162353.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF004208.0;locus_tag=O5D79_000793;product=RNA polymerase sigma factor RpoD;protein_id=HJH9162353.1;transl_table=11 DALFDJ020000003.1 tpg gene 115669 117414 . - . ID=gene-O5D79_000794;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=O5D79_000794 DALFDJ020000003.1 Protein Homology CDS 115669 117414 . - 0 ID=cds-HJH9162354.1;Parent=gene-O5D79_000794;Dbxref=NCBI_GP:HJH9162354.1;Name=HJH9162354.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462125.1;locus_tag=O5D79_000794;product=DNA primase;protein_id=HJH9162354.1;transl_table=11 DALFDJ020000003.1 tpg gene 117650 117865 . - . ID=gene-O5D79_000795;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=O5D79_000795 DALFDJ020000003.1 Protein Homology CDS 117650 117865 . - 0 ID=cds-HJH9162355.1;Parent=gene-O5D79_000795;Dbxref=NCBI_GP:HJH9162355.1;Name=HJH9162355.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=O5D79_000795;product=30S ribosomal protein S21;protein_id=HJH9162355.1;transl_table=11 DALFDJ020000003.1 tpg gene 118093 119106 . + . ID=gene-O5D79_000796;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=O5D79_000796 DALFDJ020000003.1 Protein Homology CDS 118093 119106 . + 0 ID=cds-HJH9162356.1;Parent=gene-O5D79_000796;Dbxref=NCBI_GP:HJH9162356.1;Name=HJH9162356.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=O5D79_000796;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=HJH9162356.1;transl_table=11 DALFDJ020000003.1 tpg pseudogene 119229 119372 . - . ID=gene-O5D79_000797;Name=O5D79_000797;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_000797;pseudo=true DALFDJ020000003.1 Protein Homology CDS 119229 119372 . - 0 ID=cds-O5D79_000797;Parent=gene-O5D79_000797;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311971.1;locus_tag=O5D79_000797;product=fumarate hydratase;pseudo=true;transl_table=11 DALFDJ020000003.1 tpg gene 119356 119967 . - . ID=gene-O5D79_000798;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=O5D79_000798 DALFDJ020000003.1 Protein Homology CDS 119356 119967 . - 0 ID=cds-HJH9162357.1;Parent=gene-O5D79_000798;Dbxref=NCBI_GP:HJH9162357.1;Name=HJH9162357.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462122.1;locus_tag=O5D79_000798;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=HJH9162357.1;transl_table=11 DALFDJ020000003.1 tpg gene 120074 120433 . + . ID=gene-O5D79_000799;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=O5D79_000799 DALFDJ020000003.1 Protein Homology CDS 120074 120433 . + 0 ID=cds-HJH9162358.1;Parent=gene-O5D79_000799;Dbxref=NCBI_GP:HJH9162358.1;Name=HJH9162358.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001681574.1;locus_tag=O5D79_000799;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=HJH9162358.1;transl_table=11 DALFDJ020000003.1 tpg gene 120531 121352 . + . ID=gene-O5D79_000800;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=O5D79_000800 DALFDJ020000003.1 Protein Homology CDS 120531 121352 . + 0 ID=cds-HJH9162359.1;Parent=gene-O5D79_000800;Dbxref=NCBI_GP:HJH9162359.1;Name=HJH9162359.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=O5D79_000800;product=undecaprenyl-diphosphate phosphatase;protein_id=HJH9162359.1;transl_table=11 DALFDJ020000003.1 tpg gene 121457 122698 . - . ID=gene-O5D79_000801;Name=O5D79_000801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000801 DALFDJ020000003.1 Protein Homology CDS 121457 122698 . - 0 ID=cds-HJH9162360.1;Parent=gene-O5D79_000801;Dbxref=NCBI_GP:HJH9162360.1;Name=HJH9162360.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462119.1;locus_tag=O5D79_000801;product=multifunctional CCA addition/repair protein;protein_id=HJH9162360.1;transl_table=11 DALFDJ020000003.1 tpg gene 122761 123375 . - . ID=gene-O5D79_000802;Name=O5D79_000802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000802 DALFDJ020000003.1 Protein Homology CDS 122761 123375 . - 0 ID=cds-HJH9162361.1;Parent=gene-O5D79_000802;Dbxref=NCBI_GP:HJH9162361.1;Name=HJH9162361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462118.1;locus_tag=O5D79_000802;product=TIGR04211 family SH3 domain-containing protein;protein_id=HJH9162361.1;transl_table=11 DALFDJ020000003.1 tpg gene 123617 124918 . + . ID=gene-O5D79_000803;Name=O5D79_000803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000803 DALFDJ020000003.1 Protein Homology CDS 123617 124918 . + 0 ID=cds-HJH9162362.1;Parent=gene-O5D79_000803;Dbxref=NCBI_GP:HJH9162362.1;Name=HJH9162362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462117.1;locus_tag=O5D79_000803;product=inorganic triphosphatase;protein_id=HJH9162362.1;transl_table=11 DALFDJ020000003.1 tpg gene 125036 127879 . + . ID=gene-O5D79_000804;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=O5D79_000804 DALFDJ020000003.1 Protein Homology CDS 125036 127879 . + 0 ID=cds-HJH9162363.1;Parent=gene-O5D79_000804;Dbxref=NCBI_GP:HJH9162363.1;Name=HJH9162363.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462116.1;locus_tag=O5D79_000804;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=HJH9162363.1;transl_table=11 DALFDJ020000003.1 tpg gene 127927 129360 . + . ID=gene-O5D79_000805;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=O5D79_000805 DALFDJ020000003.1 Protein Homology CDS 127927 129360 . + 0 ID=cds-HJH9162364.1;Parent=gene-O5D79_000805;Dbxref=NCBI_GP:HJH9162364.1;Name=HJH9162364.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462115.1;locus_tag=O5D79_000805;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=HJH9162364.1;transl_table=11 DALFDJ020000003.1 tpg gene 129520 129579 . - . ID=gene-O5D79_000806;Name=O5D79_000806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000806 DALFDJ020000003.1 Protein Homology CDS 129520 129579 . - 0 ID=cds-HJH9162365.1;Parent=gene-O5D79_000806;Dbxref=NCBI_GP:HJH9162365.1;Name=HJH9162365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=O5D79_000806;product=type I toxin-antitoxin system Ibs family toxin;protein_id=HJH9162365.1;transl_table=11 DALFDJ020000003.1 tpg gene 129819 131498 . - . ID=gene-O5D79_000807;Name=O5D79_000807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000807 DALFDJ020000003.1 Protein Homology CDS 129819 131498 . - 0 ID=cds-HJH9162366.1;Parent=gene-O5D79_000807;Dbxref=NCBI_GP:HJH9162366.1;Name=HJH9162366.1;Ontology_term=GO:0016020,GO:0016600;gbkey=CDS;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462114.1;locus_tag=O5D79_000807;product=flotillin family protein;protein_id=HJH9162366.1;transl_table=11 DALFDJ020000003.1 tpg gene 131517 132137 . - . ID=gene-O5D79_000808;Name=O5D79_000808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000808 DALFDJ020000003.1 Protein Homology CDS 131517 132137 . - 0 ID=cds-HJH9162367.1;Parent=gene-O5D79_000808;Dbxref=NCBI_GP:HJH9162367.1;Name=HJH9162367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462113.1;locus_tag=O5D79_000808;product=OB-fold-containig protein;protein_id=HJH9162367.1;transl_table=11 DALFDJ020000003.1 tpg gene 132395 132604 . + . ID=gene-O5D79_000809;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=O5D79_000809 DALFDJ020000003.1 Protein Homology CDS 132395 132604 . + 0 ID=cds-HJH9162368.1;Parent=gene-O5D79_000809;Dbxref=NCBI_GP:HJH9162368.1;Name=HJH9162368.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462112.1;locus_tag=O5D79_000809;product=cell surface composition regulator GlgS;protein_id=HJH9162368.1;transl_table=11 DALFDJ020000003.1 tpg gene 132679 132975 . - . ID=gene-O5D79_000810;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=O5D79_000810 DALFDJ020000003.1 Protein Homology CDS 132679 132975 . - 0 ID=cds-HJH9162369.1;Parent=gene-O5D79_000810;Dbxref=NCBI_GP:HJH9162369.1;Name=HJH9162369.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566826.1;locus_tag=O5D79_000810;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=HJH9162369.1;transl_table=11 DALFDJ020000003.1 cmsearch riboswitch 133108 133306 . + . ID=id-DALFDJ020000003.1:133108..133306;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch DALFDJ020000003.1 tpg gene 133412 134065 . + . ID=gene-O5D79_000811;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=O5D79_000811 DALFDJ020000003.1 Protein Homology CDS 133412 134065 . + 0 ID=cds-HJH9162370.1;Parent=gene-O5D79_000811;Dbxref=NCBI_GP:HJH9162370.1;Name=HJH9162370.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462110.1;locus_tag=O5D79_000811;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=HJH9162370.1;transl_table=11 DALFDJ020000003.1 tpg gene 134236 134913 . - . ID=gene-O5D79_000812;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=O5D79_000812 DALFDJ020000003.1 Protein Homology CDS 134236 134913 . - 0 ID=cds-HJH9162371.1;Parent=gene-O5D79_000812;Dbxref=NCBI_GP:HJH9162371.1;Name=HJH9162371.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462109.1;locus_tag=O5D79_000812;product=protein-disulfide oxidoreductase DsbI;protein_id=HJH9162371.1;transl_table=11 DALFDJ020000003.1 tpg gene 134928 135599 . - . ID=gene-O5D79_000813;Name=O5D79_000813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000813 DALFDJ020000003.1 Protein Homology CDS 134928 135599 . - 0 ID=cds-HJH9162372.1;Parent=gene-O5D79_000813;Dbxref=NCBI_GP:HJH9162372.1;Name=HJH9162372.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462108.1;locus_tag=O5D79_000813;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=HJH9162372.1;transl_table=11 DALFDJ020000003.1 tpg gene 135619 137415 . - . ID=gene-O5D79_000814;Name=O5D79_000814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000814 DALFDJ020000003.1 Protein Homology CDS 135619 137415 . - 0 ID=cds-HJH9162373.1;Parent=gene-O5D79_000814;Dbxref=NCBI_GP:HJH9162373.1;Name=HJH9162373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016159766.1;locus_tag=O5D79_000814;product=aryl-sulfate sulfotransferase;protein_id=HJH9162373.1;transl_table=11 DALFDJ020000003.1 tpg gene 137815 137991 . + . ID=gene-O5D79_000815;Name=O5D79_000815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000815 DALFDJ020000003.1 Protein Homology CDS 137815 137991 . + 0 ID=cds-HJH9162374.1;Parent=gene-O5D79_000815;Dbxref=NCBI_GP:HJH9162374.1;Name=HJH9162374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=O5D79_000815;product=hypothetical protein;protein_id=HJH9162374.1;transl_table=11 DALFDJ020000003.1 tpg gene 138058 138831 . - . ID=gene-O5D79_000816;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=O5D79_000816 DALFDJ020000003.1 Protein Homology CDS 138058 138831 . - 0 ID=cds-HJH9162375.1;Parent=gene-O5D79_000816;Dbxref=NCBI_GP:HJH9162375.1;Name=HJH9162375.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462105.1;locus_tag=O5D79_000816;product=zinc transporter ZupT;protein_id=HJH9162375.1;transl_table=11 DALFDJ020000003.1 tpg gene 138972 139760 . + . ID=gene-O5D79_000817;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=O5D79_000817 DALFDJ020000003.1 Protein Homology CDS 138972 139760 . + 0 ID=cds-HJH9162376.1;Parent=gene-O5D79_000817;Dbxref=NCBI_GP:HJH9162376.1;Name=HJH9162376.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=O5D79_000817;product=4%2C5-DOPA dioxygenase extradiol;protein_id=HJH9162376.1;transl_table=11 DALFDJ020000003.1 tpg gene 139821 140984 . - . ID=gene-O5D79_000818;Name=O5D79_000818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000818 DALFDJ020000003.1 Protein Homology CDS 139821 140984 . - 0 ID=cds-HJH9162377.1;Parent=gene-O5D79_000818;Dbxref=NCBI_GP:HJH9162377.1;Name=HJH9162377.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462103.1;locus_tag=O5D79_000818;product=glutathionylspermidine synthase family protein;protein_id=HJH9162377.1;transl_table=11 DALFDJ020000003.1 tpg gene 140990 141661 . - . ID=gene-O5D79_000819;Name=O5D79_000819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000819 DALFDJ020000003.1 Protein Homology CDS 140990 141661 . - 0 ID=cds-HJH9162378.1;Parent=gene-O5D79_000819;Dbxref=NCBI_GP:HJH9162378.1;Name=HJH9162378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462102.1;locus_tag=O5D79_000819;product=DUF1190 family protein;protein_id=HJH9162378.1;transl_table=11 DALFDJ020000003.1 tpg gene 141874 143349 . - . ID=gene-O5D79_000820;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=O5D79_000820 DALFDJ020000003.1 Protein Homology CDS 141874 143349 . - 0 ID=cds-HJH9162379.1;Parent=gene-O5D79_000820;Dbxref=NCBI_GP:HJH9162379.1;Name=HJH9162379.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462101.3;locus_tag=O5D79_000820;product=outer membrane channel protein TolC;protein_id=HJH9162379.1;transl_table=11 DALFDJ020000003.1 tpg gene 143550 144182 . + . ID=gene-O5D79_000821;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=O5D79_000821 DALFDJ020000003.1 Protein Homology CDS 143550 144182 . + 0 ID=cds-HJH9162380.1;Parent=gene-O5D79_000821;Dbxref=NCBI_GP:HJH9162380.1;Name=HJH9162380.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462100.1;locus_tag=O5D79_000821;product=ADP-ribose diphosphatase;protein_id=HJH9162380.1;transl_table=11 DALFDJ020000003.1 tpg gene 144179 144601 . + . ID=gene-O5D79_000822;Name=O5D79_000822;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000822 DALFDJ020000003.1 Protein Homology CDS 144179 144601 . + 0 ID=cds-HJH9162381.1;Parent=gene-O5D79_000822;Dbxref=NCBI_GP:HJH9162381.1;Name=HJH9162381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462099.1;locus_tag=O5D79_000822;product=DUF1249 family protein;protein_id=HJH9162381.1;transl_table=11 DALFDJ020000003.1 tpg gene 144626 145453 . + . ID=gene-O5D79_000823;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=O5D79_000823 DALFDJ020000003.1 Protein Homology CDS 144626 145453 . + 0 ID=cds-HJH9162382.1;Parent=gene-O5D79_000823;Dbxref=NCBI_GP:HJH9162382.1;Name=HJH9162382.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462098.1;locus_tag=O5D79_000823;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=HJH9162382.1;transl_table=11 DALFDJ020000003.1 tpg gene 145453 146034 . + . ID=gene-O5D79_000824;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=O5D79_000824 DALFDJ020000003.1 Protein Homology CDS 145453 146034 . + 0 ID=cds-HJH9162383.1;Parent=gene-O5D79_000824;Dbxref=NCBI_GP:HJH9162383.1;Name=HJH9162383.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462097.1;locus_tag=O5D79_000824;product=esterase YqiA;protein_id=HJH9162383.1;transl_table=11 DALFDJ020000003.1 tpg gene 146062 147954 . + . ID=gene-O5D79_000825;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=O5D79_000825 DALFDJ020000003.1 Protein Homology CDS 146062 147954 . + 0 ID=cds-HJH9162384.1;Parent=gene-O5D79_000825;Dbxref=NCBI_GP:HJH9162384.1;Name=HJH9162384.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462096.1;locus_tag=O5D79_000825;product=DNA topoisomerase IV subunit B;protein_id=HJH9162384.1;transl_table=11 DALFDJ020000003.1 tpg gene 148079 148393 . - . ID=gene-O5D79_000826;Name=O5D79_000826;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000826 DALFDJ020000003.1 Protein Homology CDS 148079 148393 . - 0 ID=cds-HJH9162385.1;Parent=gene-O5D79_000826;Dbxref=NCBI_GP:HJH9162385.1;Name=HJH9162385.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462095.1;locus_tag=O5D79_000826;product=putative quinol monooxygenase;protein_id=HJH9162385.1;transl_table=11 DALFDJ020000003.1 tpg gene 148425 149006 . - . ID=gene-O5D79_000827;Name=O5D79_000827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000827 DALFDJ020000003.1 Protein Homology CDS 148425 149006 . - 0 ID=cds-HJH9162386.1;Parent=gene-O5D79_000827;Dbxref=NCBI_GP:HJH9162386.1;Name=HJH9162386.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=O5D79_000827;product=NAD(P)H-dependent oxidoreductase;protein_id=HJH9162386.1;transl_table=11 DALFDJ020000003.1 tpg gene 149113 150462 . - . ID=gene-O5D79_000828;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=O5D79_000828 DALFDJ020000003.1 Protein Homology CDS 149113 150462 . - 0 ID=cds-HJH9162387.1;Parent=gene-O5D79_000828;Dbxref=NCBI_GP:HJH9162387.1;Name=HJH9162387.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462093.1;locus_tag=O5D79_000828;product=quorum sensing histidine kinase QseC;protein_id=HJH9162387.1;transl_table=11 DALFDJ020000003.1 tpg gene 150459 151118 . - . ID=gene-O5D79_000829;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=O5D79_000829 DALFDJ020000003.1 Protein Homology CDS 150459 151118 . - 0 ID=cds-HJH9162388.1;Parent=gene-O5D79_000829;Dbxref=NCBI_GP:HJH9162388.1;Name=HJH9162388.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462092.1;locus_tag=O5D79_000829;product=quorum sensing response regulator transcription factor QseB;protein_id=HJH9162388.1;transl_table=11 DALFDJ020000003.1 tpg gene 151270 151662 . + . ID=gene-O5D79_000830;Name=O5D79_000830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000830 DALFDJ020000003.1 Protein Homology CDS 151270 151662 . + 0 ID=cds-HJH9162389.1;Parent=gene-O5D79_000830;Dbxref=NCBI_GP:HJH9162389.1;Name=HJH9162389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462091.1;locus_tag=O5D79_000830;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=HJH9162389.1;transl_table=11 DALFDJ020000003.1 tpg gene 151734 152600 . + . ID=gene-O5D79_000831;Name=O5D79_000831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000831 DALFDJ020000003.1 Protein Homology CDS 151734 152600 . + 0 ID=cds-HJH9162390.1;Parent=gene-O5D79_000831;Dbxref=NCBI_GP:HJH9162390.1;Name=HJH9162390.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462090.1;locus_tag=O5D79_000831;product=AraC family transcriptional regulator;protein_id=HJH9162390.1;transl_table=11 DALFDJ020000003.1 tpg gene 152711 154969 . + . ID=gene-O5D79_000832;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=O5D79_000832 DALFDJ020000003.1 Protein Homology CDS 152711 154969 . + 0 ID=cds-HJH9162391.1;Parent=gene-O5D79_000832;Dbxref=NCBI_GP:HJH9162391.1;Name=HJH9162391.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462089.1;locus_tag=O5D79_000832;product=DNA topoisomerase IV subunit A;protein_id=HJH9162391.1;transl_table=11 DALFDJ020000003.1 tpg gene 155226 155963 . + . ID=gene-O5D79_000833;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=O5D79_000833 DALFDJ020000003.1 Protein Homology CDS 155226 155963 . + 0 ID=cds-HJH9162392.1;Parent=gene-O5D79_000833;Dbxref=NCBI_GP:HJH9162392.1;Name=HJH9162392.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462088.1;locus_tag=O5D79_000833;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=HJH9162392.1;transl_table=11 DALFDJ020000003.1 tpg gene 156037 157449 . + . ID=gene-O5D79_000834;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=O5D79_000834 DALFDJ020000003.1 Protein Homology CDS 156037 157449 . + 0 ID=cds-HJH9162393.1;Parent=gene-O5D79_000834;Dbxref=NCBI_GP:HJH9162393.1;Name=HJH9162393.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462087.1;locus_tag=O5D79_000834;product=cell division protein FtsP;protein_id=HJH9162393.1;transl_table=11 DALFDJ020000003.1 tpg gene 157470 158390 . + . ID=gene-O5D79_000835;Name=O5D79_000835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000835 DALFDJ020000003.1 Protein Homology CDS 157470 158390 . + 0 ID=cds-HJH9162394.1;Parent=gene-O5D79_000835;Dbxref=NCBI_GP:HJH9162394.1;Name=HJH9162394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001222782.1;locus_tag=O5D79_000835;product=hypothetical protein;protein_id=HJH9162394.1;transl_table=11 DALFDJ020000003.1 tpg gene 159080 159985 . + . ID=gene-O5D79_000836;Name=O5D79_000836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000836 DALFDJ020000003.1 Protein Homology CDS 159080 159985 . + 0 ID=cds-HJH9162395.1;Parent=gene-O5D79_000836;Dbxref=NCBI_GP:HJH9162395.1;Name=HJH9162395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001269658.1;locus_tag=O5D79_000836;product=hypothetical protein;protein_id=HJH9162395.1;transl_table=11 DALFDJ020000003.1 tpg gene 160001 161425 . + . ID=gene-O5D79_000837;Name=O5D79_000837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000837 DALFDJ020000003.1 Protein Homology CDS 160001 161425 . + 0 ID=cds-HJH9162396.1;Parent=gene-O5D79_000837;Dbxref=NCBI_GP:HJH9162396.1;Name=HJH9162396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000384560.1;locus_tag=O5D79_000837;product=hypothetical protein;protein_id=HJH9162396.1;transl_table=11 DALFDJ020000003.1 tpg gene 161495 162916 . + . ID=gene-O5D79_000838;Name=O5D79_000838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000838 DALFDJ020000003.1 Protein Homology CDS 161495 162916 . + 0 ID=cds-HJH9162397.1;Parent=gene-O5D79_000838;Dbxref=NCBI_GP:HJH9162397.1;Name=HJH9162397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528005.1;locus_tag=O5D79_000838;product=DUF4459 domain-containing protein;protein_id=HJH9162397.1;transl_table=11 DALFDJ020000003.1 tpg gene 163051 165222 . + . ID=gene-O5D79_000839;Name=O5D79_000839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000839 DALFDJ020000003.1 Protein Homology CDS 163051 165222 . + 0 ID=cds-HJH9162398.1;Parent=gene-O5D79_000839;Dbxref=NCBI_GP:HJH9162398.1;Name=HJH9162398.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462083.1;locus_tag=O5D79_000839;product=YgiQ family radical SAM protein;protein_id=HJH9162398.1;transl_table=11 DALFDJ020000003.1 tpg gene 165425 165619 . + . ID=gene-O5D79_000840;Name=O5D79_000840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000840 DALFDJ020000003.1 GeneMarkS-2+ CDS 165425 165619 . + 0 ID=cds-HJH9162399.1;Parent=gene-O5D79_000840;Dbxref=NCBI_GP:HJH9162399.1;Name=HJH9162399.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_000840;product=hypothetical protein;protein_id=HJH9162399.1;transl_table=11 DALFDJ020000003.1 tpg gene 165777 166232 . - . ID=gene-O5D79_000841;Name=O5D79_000841;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000841 DALFDJ020000003.1 Protein Homology CDS 165777 166232 . - 0 ID=cds-HJH9162400.1;Parent=gene-O5D79_000841;Dbxref=NCBI_GP:HJH9162400.1;Name=HJH9162400.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462082.1;locus_tag=O5D79_000841;product=HIT family protein;protein_id=HJH9162400.1;transl_table=11 DALFDJ020000003.1 tpg pseudogene 166277 167762 . - . ID=gene-O5D79_000842;Name=O5D79_000842;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_000842;pseudo=true DALFDJ020000003.1 Protein Homology CDS 166277 167762 . - 0 ID=cds-O5D79_000842;Parent=gene-O5D79_000842;Note=frameshifted;Ontology_term=GO:0006820,GO:0008509,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462081.3;locus_tag=O5D79_000842;product=DASS family sodium-coupled anion symporter;pseudo=true;transl_table=11 DALFDJ020000003.1 tpg gene 167928 168755 . - . ID=gene-O5D79_000843;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=O5D79_000843 DALFDJ020000003.1 Protein Homology CDS 167928 168755 . - 0 ID=cds-HJH9162401.1;Parent=gene-O5D79_000843;Dbxref=NCBI_GP:HJH9162401.1;Name=HJH9162401.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=O5D79_000843;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=HJH9162401.1;transl_table=11 DALFDJ020000003.1 tpg gene 168861 170024 . - . ID=gene-O5D79_000844;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=O5D79_000844 DALFDJ020000003.1 Protein Homology CDS 168861 170024 . - 0 ID=cds-HJH9162402.1;Parent=gene-O5D79_000844;Dbxref=NCBI_GP:HJH9162402.1;Name=HJH9162402.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462079.1;locus_tag=O5D79_000844;product=alcohol dehydrogenase;protein_id=HJH9162402.1;transl_table=11 DALFDJ020000003.1 tpg gene 170217 171116 . + . ID=gene-O5D79_000845;Name=O5D79_000845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000845 DALFDJ020000003.1 Protein Homology CDS 170217 171116 . + 0 ID=cds-HJH9162403.1;Parent=gene-O5D79_000845;Dbxref=NCBI_GP:HJH9162403.1;Name=HJH9162403.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=O5D79_000845;product=AraC family transcriptional regulator;protein_id=HJH9162403.1;transl_table=11 DALFDJ020000003.1 tpg gene 171180 171839 . - . ID=gene-O5D79_000846;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=O5D79_000846 DALFDJ020000003.1 Protein Homology CDS 171180 171839 . - 0 ID=cds-HJH9162404.1;Parent=gene-O5D79_000846;Dbxref=NCBI_GP:HJH9162404.1;Name=HJH9162404.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462077.1;locus_tag=O5D79_000846;product=DedA family general envelope maintenance protein YghB;protein_id=HJH9162404.1;transl_table=11 DALFDJ020000003.1 tpg gene 171979 173166 . - . ID=gene-O5D79_000847;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=O5D79_000847 DALFDJ020000003.1 Protein Homology CDS 171979 173166 . - 0 ID=cds-HJH9162405.1;Parent=gene-O5D79_000847;Dbxref=NCBI_GP:HJH9162405.1;Name=HJH9162405.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462076.1;locus_tag=O5D79_000847;product=cystathionine beta-lyase;protein_id=HJH9162405.1;transl_table=11 DALFDJ020000003.1 tpg gene 173418 174152 . + . ID=gene-O5D79_000848;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=O5D79_000848 DALFDJ020000003.1 Protein Homology CDS 173418 174152 . + 0 ID=cds-HJH9162406.1;Parent=gene-O5D79_000848;Dbxref=NCBI_GP:HJH9162406.1;Name=HJH9162406.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462074.1;locus_tag=O5D79_000848;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=HJH9162406.1;transl_table=11 DALFDJ020000003.1 tpg gene 174159 174584 . + . ID=gene-O5D79_000849;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=O5D79_000849 DALFDJ020000003.1 Protein Homology CDS 174159 174584 . + 0 ID=cds-HJH9162407.1;Parent=gene-O5D79_000849;Dbxref=NCBI_GP:HJH9162407.1;Name=HJH9162407.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462073.1;locus_tag=O5D79_000849;product=TonB system transport protein ExbD;protein_id=HJH9162407.1;transl_table=11 DALFDJ020000003.1 tpg gene 174697 175581 . - . ID=gene-O5D79_000850;Name=O5D79_000850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000850 DALFDJ020000003.1 Protein Homology CDS 174697 175581 . - 0 ID=cds-HJH9162408.1;Parent=gene-O5D79_000850;Dbxref=NCBI_GP:HJH9162408.1;Name=HJH9162408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462072.1;locus_tag=O5D79_000850;product=SDR family oxidoreductase;protein_id=HJH9162408.1;transl_table=11 DALFDJ020000003.1 tpg gene 175705 176109 . - . ID=gene-O5D79_000851;Name=O5D79_000851;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000851 DALFDJ020000003.1 Protein Homology CDS 175705 176109 . - 0 ID=cds-HJH9162409.1;Parent=gene-O5D79_000851;Dbxref=NCBI_GP:HJH9162409.1;Name=HJH9162409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462071.1;locus_tag=O5D79_000851;product=cytoplasmic protein;protein_id=HJH9162409.1;transl_table=11 DALFDJ020000003.1 tpg gene 176096 176506 . - . ID=gene-O5D79_000852;Name=O5D79_000852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000852 DALFDJ020000003.1 Protein Homology CDS 176096 176506 . - 0 ID=cds-HJH9162410.1;Parent=gene-O5D79_000852;Dbxref=NCBI_GP:HJH9162410.1;Name=HJH9162410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462070.1;locus_tag=O5D79_000852;product=hypothetical protein;protein_id=HJH9162410.1;transl_table=11 DALFDJ020000003.1 tpg gene 176609 177112 . + . ID=gene-O5D79_000853;Name=O5D79_000853;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000853 DALFDJ020000003.1 Protein Homology CDS 176609 177112 . + 0 ID=cds-HJH9162411.1;Parent=gene-O5D79_000853;Dbxref=NCBI_GP:HJH9162411.1;Name=HJH9162411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441059.1;locus_tag=O5D79_000853;product=ESA_00282 family adhesion-associated protein;protein_id=HJH9162411.1;transl_table=11 DALFDJ020000003.1 tpg gene 177391 177885 . + . ID=gene-O5D79_000854;Name=O5D79_000854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000854 DALFDJ020000003.1 Protein Homology CDS 177391 177885 . + 0 ID=cds-HJH9162412.1;Parent=gene-O5D79_000854;Dbxref=NCBI_GP:HJH9162412.1;Name=HJH9162412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462068.1;locus_tag=O5D79_000854;product=TIGR00645 family protein;protein_id=HJH9162412.1;transl_table=11 DALFDJ020000003.1 tpg gene 178192 179835 . + . ID=gene-O5D79_000855;Name=O5D79_000855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000855 DALFDJ020000003.1 Protein Homology CDS 178192 179835 . + 0 ID=cds-HJH9162413.1;Parent=gene-O5D79_000855;Dbxref=NCBI_GP:HJH9162413.1;Name=HJH9162413.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462067.1;locus_tag=O5D79_000855;product=methyl-accepting chemotaxis protein;protein_id=HJH9162413.1;transl_table=11 DALFDJ020000003.1 tpg gene 179920 180207 . + . ID=gene-O5D79_000856;Name=O5D79_000856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000856 DALFDJ020000003.1 Protein Homology CDS 179920 180207 . + 0 ID=cds-HJH9162414.1;Parent=gene-O5D79_000856;Dbxref=NCBI_GP:HJH9162414.1;Name=HJH9162414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462066.1;locus_tag=O5D79_000856;product=DUF2623 family protein;protein_id=HJH9162414.1;transl_table=11 DALFDJ020000003.1 tpg gene 180397 181515 . + . ID=gene-O5D79_000857;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=O5D79_000857 DALFDJ020000003.1 Protein Homology CDS 180397 181515 . + 0 ID=cds-HJH9162415.1;Parent=gene-O5D79_000857;Dbxref=NCBI_GP:HJH9162415.1;Name=HJH9162415.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462065.1;locus_tag=O5D79_000857;product=hydrogenase 2 small subunit;protein_id=HJH9162415.1;transl_table=11 DALFDJ020000003.1 tpg gene 181518 182504 . + . ID=gene-O5D79_000858;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=O5D79_000858 DALFDJ020000003.1 Protein Homology CDS 181518 182504 . + 0 ID=cds-HJH9162416.1;Parent=gene-O5D79_000858;Dbxref=NCBI_GP:HJH9162416.1;Name=HJH9162416.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462064.1;locus_tag=O5D79_000858;product=hydrogenase 2 operon protein HybA;protein_id=HJH9162416.1;transl_table=11 DALFDJ020000003.1 tpg gene 182494 183672 . + . ID=gene-O5D79_000859;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=O5D79_000859 DALFDJ020000003.1 Protein Homology CDS 182494 183672 . + 0 ID=cds-HJH9162417.1;Parent=gene-O5D79_000859;Dbxref=NCBI_GP:HJH9162417.1;Name=HJH9162417.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462063.1;locus_tag=O5D79_000859;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=HJH9162417.1;transl_table=11 DALFDJ020000003.1 tpg gene 183669 185372 . + . ID=gene-O5D79_000860;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=O5D79_000860 DALFDJ020000003.1 Protein Homology CDS 183669 185372 . + 0 ID=cds-HJH9162418.1;Parent=gene-O5D79_000860;Dbxref=NCBI_GP:HJH9162418.1;Name=HJH9162418.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462062.1;locus_tag=O5D79_000860;product=hydrogenase 2 large subunit;protein_id=HJH9162418.1;transl_table=11 DALFDJ020000003.1 tpg gene 185372 185866 . + . ID=gene-O5D79_000861;Name=O5D79_000861;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000861 DALFDJ020000003.1 Protein Homology CDS 185372 185866 . + 0 ID=cds-HJH9162419.1;Parent=gene-O5D79_000861;Dbxref=NCBI_GP:HJH9162419.1;Name=HJH9162419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462061.1;locus_tag=O5D79_000861;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=HJH9162419.1;transl_table=11 DALFDJ020000003.1 tpg gene 185859 186347 . + . ID=gene-O5D79_000862;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=O5D79_000862 DALFDJ020000003.1 Protein Homology CDS 185859 186347 . + 0 ID=cds-HJH9162420.1;Parent=gene-O5D79_000862;Dbxref=NCBI_GP:HJH9162420.1;Name=HJH9162420.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462060.1;locus_tag=O5D79_000862;product=hydrogenase-2 assembly chaperone;protein_id=HJH9162420.1;transl_table=11 DALFDJ020000003.1 tpg gene 186340 186681 . + . ID=gene-O5D79_000863;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=O5D79_000863 DALFDJ020000003.1 Protein Homology CDS 186340 186681 . + 0 ID=cds-HJH9162421.1;Parent=gene-O5D79_000863;Dbxref=NCBI_GP:HJH9162421.1;Name=HJH9162421.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462059.1;locus_tag=O5D79_000863;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=HJH9162421.1;transl_table=11 DALFDJ020000003.1 tpg gene 186709 186957 . + . ID=gene-O5D79_000864;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=O5D79_000864 DALFDJ020000003.1 Protein Homology CDS 186709 186957 . + 0 ID=cds-HJH9162422.1;Parent=gene-O5D79_000864;Dbxref=NCBI_GP:HJH9162422.1;Name=HJH9162422.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462058.1;locus_tag=O5D79_000864;product=hydrogenase maturation factor HybG;protein_id=HJH9162422.1;transl_table=11 DALFDJ020000003.1 tpg gene 187033 188085 . + . ID=gene-O5D79_000865;Name=O5D79_000865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000865 DALFDJ020000003.1 Protein Homology CDS 187033 188085 . + 0 ID=cds-HJH9162423.1;Parent=gene-O5D79_000865;Dbxref=NCBI_GP:HJH9162423.1;Name=HJH9162423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462057.1;locus_tag=O5D79_000865;product=ABC transporter substrate-binding protein;protein_id=HJH9162423.1;transl_table=11 DALFDJ020000003.1 tpg gene 188085 188795 . + . ID=gene-O5D79_000866;Name=O5D79_000866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000866 DALFDJ020000003.1 Protein Homology CDS 188085 188795 . + 0 ID=cds-HJH9162424.1;Parent=gene-O5D79_000866;Dbxref=NCBI_GP:HJH9162424.1;Name=HJH9162424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462056.1;locus_tag=O5D79_000866;product=molybdate ABC transporter substrate-binding protein;protein_id=HJH9162424.1;transl_table=11 DALFDJ020000003.1 tpg gene 188863 189729 . - . ID=gene-O5D79_000867;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=O5D79_000867 DALFDJ020000003.1 Protein Homology CDS 188863 189729 . - 0 ID=cds-HJH9162425.1;Parent=gene-O5D79_000867;Dbxref=NCBI_GP:HJH9162425.1;Name=HJH9162425.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462055.1;locus_tag=O5D79_000867;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=HJH9162425.1;transl_table=11 DALFDJ020000003.1 tpg gene 189956 191812 . + . ID=gene-O5D79_000868;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=O5D79_000868 DALFDJ020000003.1 Protein Homology CDS 189956 191812 . + 0 ID=cds-HJH9162426.1;Parent=gene-O5D79_000868;Dbxref=NCBI_GP:HJH9162426.1;Name=HJH9162426.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462054.1;locus_tag=O5D79_000868;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=HJH9162426.1;transl_table=11 DALFDJ020000003.1 tpg gene 192482 193540 . + . ID=gene-O5D79_000869;Name=O5D79_000869;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000869 DALFDJ020000003.1 Protein Homology CDS 192482 193540 . + 0 ID=cds-HJH9162427.1;Parent=gene-O5D79_000869;Dbxref=NCBI_GP:HJH9162427.1;Name=HJH9162427.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA,zinc ion binding|0008270||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462053.1;locus_tag=O5D79_000869;product=methyl-accepting chemotaxis protein;protein_id=HJH9162427.1;transl_table=11 DALFDJ020000003.1 tpg gene 193840 195252 . - . ID=gene-O5D79_000870;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=O5D79_000870 DALFDJ020000003.1 Protein Homology CDS 193840 195252 . - 0 ID=cds-HJH9162428.1;Parent=gene-O5D79_000870;Dbxref=NCBI_GP:HJH9162428.1;Name=HJH9162428.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462052.1;locus_tag=O5D79_000870;product=glucuronate isomerase;protein_id=HJH9162428.1;transl_table=11 DALFDJ020000003.1 tpg gene 195264 196736 . - . ID=gene-O5D79_000871;Name=O5D79_000871;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000871 DALFDJ020000003.1 Protein Homology CDS 195264 196736 . - 0 ID=cds-HJH9162429.1;Parent=gene-O5D79_000871;Dbxref=NCBI_GP:HJH9162429.1;Name=HJH9162429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462051.1;locus_tag=O5D79_000871;product=fructuronate reductase;protein_id=HJH9162429.1;transl_table=11 DALFDJ020000003.1 tpg gene 196847 198031 . - . ID=gene-O5D79_000872;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=O5D79_000872 DALFDJ020000003.1 Protein Homology CDS 196847 198031 . - 0 ID=cds-HJH9162430.1;Parent=gene-O5D79_000872;Dbxref=NCBI_GP:HJH9162430.1;Name=HJH9162430.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462050.1;locus_tag=O5D79_000872;product=mannonate dehydratase;protein_id=HJH9162430.1;transl_table=11 DALFDJ020000003.1 tpg gene 198435 199739 . + . ID=gene-O5D79_000873;Name=O5D79_000873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000873 DALFDJ020000003.1 Protein Homology CDS 198435 199739 . + 0 ID=cds-HJH9162431.1;Parent=gene-O5D79_000873;Dbxref=NCBI_GP:HJH9162431.1;Name=HJH9162431.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462049.1;locus_tag=O5D79_000873;product=MFS transporter;protein_id=HJH9162431.1;transl_table=11 DALFDJ020000003.1 tpg gene 200135 201013 . + . ID=gene-O5D79_000874;Name=O5D79_000874;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000874 DALFDJ020000003.1 Protein Homology CDS 200135 201013 . + 0 ID=cds-HJH9162432.1;Parent=gene-O5D79_000874;Dbxref=NCBI_GP:HJH9162432.1;Name=HJH9162432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462048.1;locus_tag=O5D79_000874;product=carbon-nitrogen hydrolase family protein;protein_id=HJH9162432.1;transl_table=11 DALFDJ020000003.1 tpg gene 201052 201975 . + . ID=gene-O5D79_000875;Name=O5D79_000875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000875 DALFDJ020000003.1 Protein Homology CDS 201052 201975 . + 0 ID=cds-HJH9162433.1;Parent=gene-O5D79_000875;Dbxref=NCBI_GP:HJH9162433.1;Name=HJH9162433.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462047.1;locus_tag=O5D79_000875;product=polysaccharide deacetylase family protein;protein_id=HJH9162433.1;transl_table=11 DALFDJ020000003.1 tpg gene 202701 203186 . + . ID=gene-O5D79_000876;Name=O5D79_000876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000876 DALFDJ020000003.1 Protein Homology CDS 202701 203186 . + 0 ID=cds-HJH9162434.1;Parent=gene-O5D79_000876;Dbxref=NCBI_GP:HJH9162434.1;Name=HJH9162434.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462046.1;locus_tag=O5D79_000876;product=Hcp family type VI secretion system effector;protein_id=HJH9162434.1;transl_table=11 DALFDJ020000003.1 tpg gene 203186 203566 . + . ID=gene-O5D79_000877;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=O5D79_000877 DALFDJ020000003.1 Protein Homology CDS 203186 203566 . + 0 ID=cds-HJH9162435.1;Parent=gene-O5D79_000877;Dbxref=NCBI_GP:HJH9162435.1;Name=HJH9162435.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462045.1;locus_tag=O5D79_000877;product=anti-adapter protein IraD;protein_id=HJH9162435.1;transl_table=11 DALFDJ020000003.1 tpg gene 203702 205186 . - . ID=gene-O5D79_000878;Name=O5D79_000878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000878 DALFDJ020000003.1 Protein Homology CDS 203702 205186 . - 0 ID=cds-HJH9162436.1;Parent=gene-O5D79_000878;Dbxref=NCBI_GP:HJH9162436.1;Name=HJH9162436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=O5D79_000878;product=NAD-dependent phenylacetaldehyde dehydrogenase;protein_id=HJH9162436.1;transl_table=11 DALFDJ020000003.1 tpg gene 205348 206649 . + . ID=gene-O5D79_000879;Name=O5D79_000879;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000879 DALFDJ020000003.1 Protein Homology CDS 205348 206649 . + 0 ID=cds-HJH9162437.1;Parent=gene-O5D79_000879;Dbxref=NCBI_GP:HJH9162437.1;Name=HJH9162437.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462043.1;locus_tag=O5D79_000879;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=HJH9162437.1;transl_table=11 DALFDJ020000003.1 tpg gene 206664 207038 . + . ID=gene-O5D79_000880;Name=O5D79_000880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000880 DALFDJ020000003.1 Protein Homology CDS 206664 207038 . + 0 ID=cds-HJH9162438.1;Parent=gene-O5D79_000880;Dbxref=NCBI_GP:HJH9162438.1;Name=HJH9162438.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462042.1;locus_tag=O5D79_000880;product=cupin domain-containing protein;protein_id=HJH9162438.1;transl_table=11 DALFDJ020000003.1 tpg gene 207247 208746 . + . ID=gene-O5D79_000881;Name=O5D79_000881;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000881 DALFDJ020000003.1 Protein Homology CDS 207247 208746 . + 0 ID=cds-HJH9162439.1;Parent=gene-O5D79_000881;Dbxref=NCBI_GP:HJH9162439.1;Name=HJH9162439.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462041.1;locus_tag=O5D79_000881;product=APC family permease;protein_id=HJH9162439.1;transl_table=11 DALFDJ020000003.1 tpg gene 208724 209281 . + . ID=gene-O5D79_000882;Name=O5D79_000882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000882 DALFDJ020000003.1 Protein Homology CDS 208724 209281 . + 0 ID=cds-HJH9162440.1;Parent=gene-O5D79_000882;Dbxref=NCBI_GP:HJH9162440.1;Name=HJH9162440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462040.1;locus_tag=O5D79_000882;product=DUF3156 family protein;protein_id=HJH9162440.1;transl_table=11 DALFDJ020000003.1 tpg gene 209386 210069 . - . ID=gene-O5D79_000883;Name=O5D79_000883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000883 DALFDJ020000003.1 Protein Homology CDS 209386 210069 . - 0 ID=cds-HJH9162441.1;Parent=gene-O5D79_000883;Dbxref=NCBI_GP:HJH9162441.1;Name=HJH9162441.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462039.1;locus_tag=O5D79_000883;product=response regulator transcription factor;protein_id=HJH9162441.1;transl_table=11 DALFDJ020000003.1 tpg gene 210581 211765 . + . ID=gene-O5D79_000884;Name=O5D79_000884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000884 DALFDJ020000003.1 Protein Homology CDS 210581 211765 . + 0 ID=cds-HJH9162442.1;Parent=gene-O5D79_000884;Dbxref=NCBI_GP:HJH9162442.1;Name=HJH9162442.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462038.1;locus_tag=O5D79_000884;product=anaerobic sulfatase maturase;protein_id=HJH9162442.1;transl_table=11 DALFDJ020000003.1 tpg gene 211834 213573 . + . ID=gene-O5D79_000885;Name=O5D79_000885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000885 DALFDJ020000003.1 Protein Homology CDS 211834 213573 . + 0 ID=cds-HJH9162443.1;Parent=gene-O5D79_000885;Dbxref=NCBI_GP:HJH9162443.1;Name=HJH9162443.1;Ontology_term=GO:0004065,GO:0008081,GO:0046872;gbkey=CDS;go_function=arylsulfatase activity|0004065||IEA,phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462037.1;locus_tag=O5D79_000885;product=arylsulfatase;protein_id=HJH9162443.1;transl_table=11 DALFDJ020000003.1 tpg gene 213621 214499 . - . ID=gene-O5D79_000886;Name=ripR;gbkey=Gene;gene=ripR;gene_biotype=protein_coding;locus_tag=O5D79_000886 DALFDJ020000003.1 Protein Homology CDS 213621 214499 . - 0 ID=cds-HJH9162444.1;Parent=gene-O5D79_000886;Dbxref=NCBI_GP:HJH9162444.1;Name=HJH9162444.1;gbkey=CDS;gene=ripR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462036.1;locus_tag=O5D79_000886;product=itaconate degradation transcriptional regulator RipR;protein_id=HJH9162444.1;transl_table=11 DALFDJ020000003.1 tpg gene 214591 215433 . + . ID=gene-O5D79_000887;Name=ripC;gbkey=Gene;gene=ripC;gene_biotype=protein_coding;locus_tag=O5D79_000887 DALFDJ020000003.1 Protein Homology CDS 214591 215433 . + 0 ID=cds-HJH9162445.1;Parent=gene-O5D79_000887;Dbxref=NCBI_GP:HJH9162445.1;Name=HJH9162445.1;Note=Third step in itaconate degradation.;gbkey=CDS;gene=ripC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462035.1;locus_tag=O5D79_000887;product=itaconate degradation C-C-lyase RipC;protein_id=HJH9162445.1;transl_table=11 DALFDJ020000003.1 tpg gene 215457 215984 . + . ID=gene-O5D79_000888;Name=ripB;gbkey=Gene;gene=ripB;gene_biotype=protein_coding;locus_tag=O5D79_000888 DALFDJ020000003.1 Protein Homology CDS 215457 215984 . + 0 ID=cds-HJH9162446.1;Parent=gene-O5D79_000888;Dbxref=NCBI_GP:HJH9162446.1;Name=HJH9162446.1;Note=Second step in itaconate degradation.;gbkey=CDS;gene=ripB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462034.1;locus_tag=O5D79_000888;product=(R)-specific enoyl-CoA hydratase RipB/Ich;protein_id=HJH9162446.1;transl_table=11 DALFDJ020000003.1 tpg gene 216009 217334 . + . ID=gene-O5D79_000889;Name=ripA;gbkey=Gene;gene=ripA;gene_biotype=protein_coding;gene_synonym=ict;locus_tag=O5D79_000889 DALFDJ020000003.1 Protein Homology CDS 216009 217334 . + 0 ID=cds-HJH9162447.1;Parent=gene-O5D79_000889;Dbxref=NCBI_GP:HJH9162447.1;Name=HJH9162447.1;Note=Transfers CoA from succinate to itaconate;gbkey=CDS;gene=ripA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462033.1;locus_tag=O5D79_000889;product=itaconate CoA-transferase RipA/Ict;protein_id=HJH9162447.1;transl_table=11 DALFDJ020000003.1 tpg gene 217399 217779 . + . ID=gene-O5D79_000890;Name=O5D79_000890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000890 DALFDJ020000003.1 Protein Homology CDS 217399 217779 . + 0 ID=cds-HJH9162448.1;Parent=gene-O5D79_000890;Dbxref=NCBI_GP:HJH9162448.1;Name=HJH9162448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582669.1;locus_tag=O5D79_000890;product=VOC family protein;protein_id=HJH9162448.1;transl_table=11 DALFDJ020000003.1 tpg gene 218207 218584 . - . ID=gene-O5D79_000891;Name=O5D79_000891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000891 DALFDJ020000003.1 Protein Homology CDS 218207 218584 . - 0 ID=cds-HJH9162449.1;Parent=gene-O5D79_000891;Dbxref=NCBI_GP:HJH9162449.1;Name=HJH9162449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000916345.1;locus_tag=O5D79_000891;product=EthD domain-containing protein;protein_id=HJH9162449.1;transl_table=11 DALFDJ020000003.1 tpg gene 218656 218988 . + . ID=gene-O5D79_000892;Name=O5D79_000892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000892 DALFDJ020000003.1 Protein Homology CDS 218656 218988 . + 0 ID=cds-HJH9162450.1;Parent=gene-O5D79_000892;Dbxref=NCBI_GP:HJH9162450.1;Name=HJH9162450.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463185.1;locus_tag=O5D79_000892;product=MerR family transcriptional regulator;protein_id=HJH9162450.1;transl_table=11 DALFDJ020000003.1 tpg gene 219193 220335 . + . ID=gene-O5D79_000893;Name=O5D79_000893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000893 DALFDJ020000003.1 Protein Homology CDS 219193 220335 . + 0 ID=cds-HJH9162451.1;Parent=gene-O5D79_000893;Dbxref=NCBI_GP:HJH9162451.1;Name=HJH9162451.1;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012822466.1;locus_tag=O5D79_000893;product=Fic family protein;protein_id=HJH9162451.1;transl_table=11 DALFDJ020000003.1 tpg gene 220610 220954 . - . ID=gene-O5D79_000894;Name=O5D79_000894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000894 DALFDJ020000003.1 Protein Homology CDS 220610 220954 . - 0 ID=cds-HJH9162452.1;Parent=gene-O5D79_000894;Dbxref=NCBI_GP:HJH9162452.1;Name=HJH9162452.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: protein motif:HMM:NF014442.6;locus_tag=O5D79_000894;product=N-6 DNA methylase;protein_id=HJH9162452.1;transl_table=11 DALFDJ020000003.1 tpg gene 221046 221411 . + . ID=gene-O5D79_000895;Name=O5D79_000895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000895 DALFDJ020000003.1 GeneMarkS-2+ CDS 221046 221411 . + 0 ID=cds-HJH9162453.1;Parent=gene-O5D79_000895;Dbxref=NCBI_GP:HJH9162453.1;Name=HJH9162453.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_000895;product=hypothetical protein;protein_id=HJH9162453.1;transl_table=11 DALFDJ020000003.1 tpg gene 221401 221712 . + . ID=gene-O5D79_000896;Name=O5D79_000896;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000896 DALFDJ020000003.1 Protein Homology CDS 221401 221712 . + 0 ID=cds-HJH9162454.1;Parent=gene-O5D79_000896;Dbxref=NCBI_GP:HJH9162454.1;Name=HJH9162454.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019154.6;locus_tag=O5D79_000896;product=conjugal transfer nickase/helicase domain-containing protein;protein_id=HJH9162454.1;transl_table=11 DALFDJ020000003.1 tpg gene 221986 223305 . - . ID=gene-O5D79_000897;Name=O5D79_000897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000897 DALFDJ020000003.1 Protein Homology CDS 221986 223305 . - 0 ID=cds-HJH9162455.1;Parent=gene-O5D79_000897;Dbxref=NCBI_GP:HJH9162455.1;Name=HJH9162455.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534139.1;locus_tag=O5D79_000897;product=ferredoxin reductase family protein;protein_id=HJH9162455.1;transl_table=11 DALFDJ020000003.1 tpg gene 223381 223644 . - . ID=gene-O5D79_000898;Name=O5D79_000898;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000898 DALFDJ020000003.1 Protein Homology CDS 223381 223644 . - 0 ID=cds-HJH9162456.1;Parent=gene-O5D79_000898;Dbxref=NCBI_GP:HJH9162456.1;Name=HJH9162456.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018986.6;locus_tag=O5D79_000898;product=YdgH/BhsA/McbA-like domain containing protein;protein_id=HJH9162456.1;transl_table=11 DALFDJ020000003.1 tpg gene 223670 224293 . - . ID=gene-O5D79_000899;Name=O5D79_000899;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000899 DALFDJ020000003.1 Protein Homology CDS 223670 224293 . - 0 ID=cds-HJH9162457.1;Parent=gene-O5D79_000899;Dbxref=NCBI_GP:HJH9162457.1;Name=HJH9162457.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0016491,GO:0050136,GO:0050446;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,azobenzene reductase activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000697438.1;locus_tag=O5D79_000899;product=FMN-dependent NADH-azoreductase;protein_id=HJH9162457.1;transl_table=11 DALFDJ020000003.1 tpg gene 224394 225299 . + . ID=gene-O5D79_000900;Name=O5D79_000900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000900 DALFDJ020000003.1 Protein Homology CDS 224394 225299 . + 0 ID=cds-HJH9162458.1;Parent=gene-O5D79_000900;Dbxref=NCBI_GP:HJH9162458.1;Name=HJH9162458.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441073.1;locus_tag=O5D79_000900;product=LysR family transcriptional regulator;protein_id=HJH9162458.1;transl_table=11 DALFDJ020000003.1 tpg pseudogene 225573 225800 . - . ID=gene-O5D79_000901;Name=O5D79_000901;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_000901;pseudo=true DALFDJ020000003.1 Protein Homology CDS 225573 225800 . - 0 ID=cds-O5D79_000901;Parent=gene-O5D79_000901;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005975783.1;locus_tag=O5D79_000901;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000003.1 tpg pseudogene 226102 227055 . + . ID=gene-O5D79_000902;Name=O5D79_000902;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_000902;pseudo=true DALFDJ020000003.1 Protein Homology CDS 226102 227055 . + 0 ID=cds-O5D79_000902;Parent=gene-O5D79_000902;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009114273.1;locus_tag=O5D79_000902;product=ParA family protein;pseudo=true;transl_table=11 DALFDJ020000003.1 tpg gene 227494 228906 . + . ID=gene-O5D79_000903;Name=dnaB-PI;gbkey=Gene;gene=dnaB-PI;gene_biotype=protein_coding;locus_tag=O5D79_000903 DALFDJ020000003.1 Protein Homology CDS 227494 228906 . + 0 ID=cds-HJH9162459.1;Parent=gene-O5D79_000903;Dbxref=NCBI_GP:HJH9162459.1;Name=HJH9162459.1;gbkey=CDS;gene=dnaB-PI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750519.1;locus_tag=O5D79_000903;product=SPI-7-type island replicative DNA helicase;protein_id=HJH9162459.1;transl_table=11 DALFDJ020000003.1 tpg gene 229072 230871 . + . ID=gene-O5D79_000904;Name=O5D79_000904;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000904 DALFDJ020000003.1 Protein Homology CDS 229072 230871 . + 0 ID=cds-HJH9162460.1;Parent=gene-O5D79_000904;Dbxref=NCBI_GP:HJH9162460.1;Name=HJH9162460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750518.1;locus_tag=O5D79_000904;product=ParB family protein;protein_id=HJH9162460.1;transl_table=11 DALFDJ020000003.1 tpg gene 230868 231014 . + . ID=gene-O5D79_000905;Name=O5D79_000905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000905 DALFDJ020000003.1 GeneMarkS-2+ CDS 230868 231014 . + 0 ID=cds-HJH9162461.1;Parent=gene-O5D79_000905;Dbxref=NCBI_GP:HJH9162461.1;Name=HJH9162461.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_000905;product=hypothetical protein;protein_id=HJH9162461.1;transl_table=11 DALFDJ020000003.1 tpg gene 231041 231538 . + . ID=gene-O5D79_000906;Name=O5D79_000906;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000906 DALFDJ020000003.1 Protein Homology CDS 231041 231538 . + 0 ID=cds-HJH9162462.1;Parent=gene-O5D79_000906;Dbxref=NCBI_GP:HJH9162462.1;Name=HJH9162462.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048645.1;locus_tag=O5D79_000906;product=DUF7168 domain-containing protein;protein_id=HJH9162462.1;transl_table=11 DALFDJ020000003.1 tpg gene 231673 232239 . + . ID=gene-O5D79_000907;Name=O5D79_000907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000907 DALFDJ020000003.1 Protein Homology CDS 231673 232239 . + 0 ID=cds-HJH9162463.1;Parent=gene-O5D79_000907;Dbxref=NCBI_GP:HJH9162463.1;Name=HJH9162463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750516.1;locus_tag=O5D79_000907;product=DUF2857 domain-containing protein;protein_id=HJH9162463.1;transl_table=11 DALFDJ020000003.1 tpg gene 232236 232490 . + . ID=gene-O5D79_000908;Name=O5D79_000908;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000908 DALFDJ020000003.1 Protein Homology CDS 232236 232490 . + 0 ID=cds-HJH9162464.1;Parent=gene-O5D79_000908;Dbxref=NCBI_GP:HJH9162464.1;Name=HJH9162464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750515.1;locus_tag=O5D79_000908;product=hypothetical protein;protein_id=HJH9162464.1;transl_table=11 DALFDJ020000003.1 tpg gene 232705 234051 . + . ID=gene-O5D79_000909;Name=O5D79_000909;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000909 DALFDJ020000003.1 Protein Homology CDS 232705 234051 . + 0 ID=cds-HJH9162465.1;Parent=gene-O5D79_000909;Dbxref=NCBI_GP:HJH9162465.1;Name=HJH9162465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750514.1;locus_tag=O5D79_000909;product=STY4528 family pathogenicity island replication protein;protein_id=HJH9162465.1;transl_table=11 DALFDJ020000003.1 tpg gene 234599 235081 . - . ID=gene-O5D79_000910;Name=O5D79_000910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000910 DALFDJ020000003.1 Protein Homology CDS 234599 235081 . - 0 ID=cds-HJH9162466.1;Parent=gene-O5D79_000910;Dbxref=NCBI_GP:HJH9162466.1;Name=HJH9162466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001004766.1;locus_tag=O5D79_000910;product=hypothetical protein;protein_id=HJH9162466.1;transl_table=11 DALFDJ020000003.1 tpg gene 235332 236462 . + . ID=gene-O5D79_000911;Name=O5D79_000911;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000911 DALFDJ020000003.1 Protein Homology CDS 235332 236462 . + 0 ID=cds-HJH9162467.1;Parent=gene-O5D79_000911;Dbxref=NCBI_GP:HJH9162467.1;Name=HJH9162467.1;Ontology_term=GO:0006304,GO:0003677,GO:0003886,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA (cytosine-5-)-methyltransferase activity|0003886||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004708294.1;locus_tag=O5D79_000911;product=DNA cytosine methyltransferase;protein_id=HJH9162467.1;transl_table=11 DALFDJ020000003.1 tpg gene 236419 237402 . + . ID=gene-O5D79_000912;Name=O5D79_000912;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000912 DALFDJ020000003.1 Protein Homology CDS 236419 237402 . + 0 ID=cds-HJH9162468.1;Parent=gene-O5D79_000912;Dbxref=NCBI_GP:HJH9162468.1;Name=HJH9162468.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004392887.1;locus_tag=O5D79_000912;product=HNH endonuclease;protein_id=HJH9162468.1;transl_table=11 DALFDJ020000003.1 tpg gene 238013 238528 . - . ID=gene-O5D79_000913;Name=O5D79_000913;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000913 DALFDJ020000003.1 Protein Homology CDS 238013 238528 . - 0 ID=cds-HJH9162469.1;Parent=gene-O5D79_000913;Dbxref=NCBI_GP:HJH9162469.1;Name=HJH9162469.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008501271.1;locus_tag=O5D79_000913;product=GNAT family N-acetyltransferase;protein_id=HJH9162469.1;transl_table=11 DALFDJ020000003.1 tpg gene 238732 239367 . - . ID=gene-O5D79_000914;Name=O5D79_000914;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000914 DALFDJ020000003.1 Protein Homology CDS 238732 239367 . - 0 ID=cds-HJH9162470.1;Parent=gene-O5D79_000914;Dbxref=NCBI_GP:HJH9162470.1;Name=HJH9162470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015701121.1;locus_tag=O5D79_000914;product=DUF2268 domain-containing protein;protein_id=HJH9162470.1;transl_table=11 DALFDJ020000003.1 tpg pseudogene 239513 239713 . - . ID=gene-O5D79_000915;Name=O5D79_000915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_000915;pseudo=true DALFDJ020000003.1 Protein Homology CDS 239513 239713 . - 0 ID=cds-O5D79_000915;Parent=gene-O5D79_000915;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010340155.1;locus_tag=O5D79_000915;product=integrase;pseudo=true;transl_table=11 DALFDJ020000003.1 tpg gene 239900 240871 . + . ID=gene-O5D79_000916;Name=O5D79_000916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000916 DALFDJ020000003.1 Protein Homology CDS 239900 240871 . + 0 ID=cds-HJH9162471.1;Parent=gene-O5D79_000916;Dbxref=NCBI_GP:HJH9162471.1;Name=HJH9162471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750507.1;locus_tag=O5D79_000916;product=PFL_4669 family integrating conjugative element protein;protein_id=HJH9162471.1;transl_table=11 DALFDJ020000003.1 tpg gene 240880 242904 . + . ID=gene-O5D79_000917;Name=O5D79_000917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000917 DALFDJ020000003.1 Protein Homology CDS 240880 242904 . + 0 ID=cds-HJH9162472.1;Parent=gene-O5D79_000917;Dbxref=NCBI_GP:HJH9162472.1;Name=HJH9162472.1;Ontology_term=GO:0006261,GO:0006265,GO:0006310,GO:0051304,GO:0003677,GO:0003916,GO:0003917,GO:0098847;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA,sequence-specific single stranded DNA binding|0098847||IEA;go_process=DNA-templated DNA replication|0006261||IEA,DNA topological change|0006265||IEA,DNA recombination|0006310||IEA,chromosome separation|0051304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750506.1;locus_tag=O5D79_000917;product=DNA topoisomerase III;protein_id=HJH9162472.1;transl_table=11 DALFDJ020000003.1 tpg gene 243603 244067 . + . ID=gene-O5D79_000918;Name=O5D79_000918;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000918 DALFDJ020000003.1 Protein Homology CDS 243603 244067 . + 0 ID=cds-HJH9162473.1;Parent=gene-O5D79_000918;Dbxref=NCBI_GP:HJH9162473.1;Name=HJH9162473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000115786.1;locus_tag=O5D79_000918;product=STY4534 family ICE replication protein;protein_id=HJH9162473.1;transl_table=11 DALFDJ020000003.1 tpg gene 244160 244378 . + . ID=gene-O5D79_000919;Name=O5D79_000919;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000919 DALFDJ020000003.1 Protein Homology CDS 244160 244378 . + 0 ID=cds-HJH9162474.1;Parent=gene-O5D79_000919;Dbxref=NCBI_GP:HJH9162474.1;Name=HJH9162474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000958195.1;locus_tag=O5D79_000919;product=hypothetical protein;protein_id=HJH9162474.1;transl_table=11 DALFDJ020000003.1 tpg gene 244391 244894 . + . ID=gene-O5D79_000920;Name=O5D79_000920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000920 DALFDJ020000003.1 Protein Homology CDS 244391 244894 . + 0 ID=cds-HJH9162475.1;Parent=gene-O5D79_000920;Dbxref=NCBI_GP:HJH9162475.1;Name=HJH9162475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151744.1;locus_tag=O5D79_000920;product=single-stranded DNA-binding protein;protein_id=HJH9162475.1;transl_table=11 DALFDJ020000003.1 tpg gene 245065 245172 . + . ID=gene-O5D79_000921;Name=O5D79_000921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000921 DALFDJ020000003.1 Protein Homology CDS 245065 245172 . + 0 ID=cds-HJH9162476.1;Parent=gene-O5D79_000921;Dbxref=NCBI_GP:HJH9162476.1;Name=HJH9162476.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016629.6;locus_tag=O5D79_000921;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=HJH9162476.1;transl_table=11 DALFDJ020000003.1 tpg gene 245376 245858 . - . ID=gene-O5D79_000922;Name=O5D79_000922;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000922 DALFDJ020000003.1 Protein Homology CDS 245376 245858 . - 0 ID=cds-HJH9162477.1;Parent=gene-O5D79_000922;Dbxref=NCBI_GP:HJH9162477.1;Name=HJH9162477.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858192.1;locus_tag=O5D79_000922;product=GNAT family N-acetyltransferase;protein_id=HJH9162477.1;transl_table=11 DALFDJ020000003.1 tpg gene 245849 246133 . - . ID=gene-O5D79_000923;Name=O5D79_000923;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000923 DALFDJ020000003.1 Protein Homology CDS 245849 246133 . - 0 ID=cds-HJH9162478.1;Parent=gene-O5D79_000923;Dbxref=NCBI_GP:HJH9162478.1;Name=HJH9162478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001195099.1;locus_tag=O5D79_000923;product=DUF1778 domain-containing protein;protein_id=HJH9162478.1;transl_table=11 DALFDJ020000003.1 tpg gene 246523 247782 . + . ID=gene-O5D79_000924;Name=O5D79_000924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000924 DALFDJ020000003.1 Protein Homology CDS 246523 247782 . + 0 ID=cds-HJH9162479.1;Parent=gene-O5D79_000924;Dbxref=NCBI_GP:HJH9162479.1;Name=HJH9162479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750500.1;locus_tag=O5D79_000924;product=TcpQ domain-containing protein;protein_id=HJH9162479.1;transl_table=11 DALFDJ020000003.1 tpg gene 247782 248219 . + . ID=gene-O5D79_000925;Name=pilM;gbkey=Gene;gene=pilM;gene_biotype=protein_coding;locus_tag=O5D79_000925 DALFDJ020000003.1 Protein Homology CDS 247782 248219 . + 0 ID=cds-HJH9162480.1;Parent=gene-O5D79_000925;Dbxref=NCBI_GP:HJH9162480.1;Name=HJH9162480.1;gbkey=CDS;gene=pilM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750499.1;locus_tag=O5D79_000925;product=type IV pilus biogenesis protein PilM;protein_id=HJH9162480.1;transl_table=11 DALFDJ020000003.1 tpg gene 248240 249928 . + . ID=gene-O5D79_000926;Name=O5D79_000926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000926 DALFDJ020000003.1 Protein Homology CDS 248240 249928 . + 0 ID=cds-HJH9162481.1;Parent=gene-O5D79_000926;Dbxref=NCBI_GP:HJH9162481.1;Name=HJH9162481.1;Ontology_term=GO:0009297,GO:0009306,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_process=pilus assembly|0009297||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750498.1;locus_tag=O5D79_000926;product=PilN family type IVB pilus formation outer membrane protein;protein_id=HJH9162481.1;transl_table=11 DALFDJ020000003.1 tpg gene 249930 251225 . + . ID=gene-O5D79_000927;Name=pilO2;gbkey=Gene;gene=pilO2;gene_biotype=protein_coding;locus_tag=O5D79_000927 DALFDJ020000003.1 Protein Homology CDS 249930 251225 . + 0 ID=cds-HJH9162482.1;Parent=gene-O5D79_000927;Dbxref=NCBI_GP:HJH9162482.1;Name=HJH9162482.1;gbkey=CDS;gene=pilO2;inference=COORDINATES: protein motif:HMM:NF018562.6;locus_tag=O5D79_000927;product=type 4b pilus protein PilO2;protein_id=HJH9162482.1;transl_table=11 DALFDJ020000003.1 tpg gene 251209 251838 . + . ID=gene-O5D79_000928;Name=pilP;gbkey=Gene;gene=pilP;gene_biotype=protein_coding;locus_tag=O5D79_000928 DALFDJ020000003.1 Protein Homology CDS 251209 251838 . + 0 ID=cds-HJH9162483.1;Parent=gene-O5D79_000928;Dbxref=NCBI_GP:HJH9162483.1;Name=HJH9162483.1;Ontology_term=GO:0009297;gbkey=CDS;gene=pilP;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: protein motif:HMM:TIGR03021.1;locus_tag=O5D79_000928;product=type IV pilus biogenesis protein PilP;protein_id=HJH9162483.1;transl_table=11 DALFDJ020000003.1 tpg gene 251855 253660 . + . ID=gene-O5D79_000929;Name=O5D79_000929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000929 DALFDJ020000003.1 Protein Homology CDS 251855 253660 . + 0 ID=cds-HJH9162484.1;Parent=gene-O5D79_000929;Dbxref=NCBI_GP:HJH9162484.1;Name=HJH9162484.1;Ontology_term=GO:0009306,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750494.1;locus_tag=O5D79_000929;product=GspE/PulE family protein;protein_id=HJH9162484.1;transl_table=11 DALFDJ020000003.1 tpg gene 253650 254768 . + . ID=gene-O5D79_000930;Name=O5D79_000930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000930 DALFDJ020000003.1 Protein Homology CDS 253650 254768 . + 0 ID=cds-HJH9162485.1;Parent=gene-O5D79_000930;Dbxref=NCBI_GP:HJH9162485.1;Name=HJH9162485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750493.1;locus_tag=O5D79_000930;product=type II secretion system F family protein;protein_id=HJH9162485.1;transl_table=11 DALFDJ020000003.1 tpg gene 254817 255428 . + . ID=gene-O5D79_000931;Name=O5D79_000931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000931 DALFDJ020000003.1 Protein Homology CDS 254817 255428 . + 0 ID=cds-HJH9162486.1;Parent=gene-O5D79_000931;Dbxref=NCBI_GP:HJH9162486.1;Name=HJH9162486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750492.1;locus_tag=O5D79_000931;product=type 4 pilus major pilin;protein_id=HJH9162486.1;transl_table=11 DALFDJ020000003.1 tpg gene 255456 255989 . + . ID=gene-O5D79_000932;Name=O5D79_000932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000932 DALFDJ020000003.1 Protein Homology CDS 255456 255989 . + 0 ID=cds-HJH9162487.1;Parent=gene-O5D79_000932;Dbxref=NCBI_GP:HJH9162487.1;Name=HJH9162487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750491.1;locus_tag=O5D79_000932;product=lytic transglycosylase domain-containing protein;protein_id=HJH9162487.1;transl_table=11 DALFDJ020000003.1 tpg gene 255986 256135 . + . ID=gene-O5D79_000933;Name=O5D79_000933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000933 DALFDJ020000003.1 GeneMarkS-2+ CDS 255986 256135 . + 0 ID=cds-HJH9162488.1;Parent=gene-O5D79_000933;Dbxref=NCBI_GP:HJH9162488.1;Name=HJH9162488.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_000933;product=hypothetical protein;protein_id=HJH9162488.1;transl_table=11 DALFDJ020000003.1 tpg gene 256132 256806 . + . ID=gene-O5D79_000934;Name=O5D79_000934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000934 DALFDJ020000003.1 Protein Homology CDS 256132 256806 . + 0 ID=cds-HJH9162489.1;Parent=gene-O5D79_000934;Dbxref=NCBI_GP:HJH9162489.1;Name=HJH9162489.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: protein motif:HMM:NF013632.6;locus_tag=O5D79_000934;product=prepilin peptidase;protein_id=HJH9162489.1;transl_table=11 DALFDJ020000003.1 tpg gene 256806 258032 . + . ID=gene-O5D79_000935;Name=pilV;gbkey=Gene;gene=pilV;gene_biotype=protein_coding;locus_tag=O5D79_000935 DALFDJ020000003.1 Protein Homology CDS 256806 258032 . + 0 ID=cds-HJH9162490.1;Parent=gene-O5D79_000935;Dbxref=NCBI_GP:HJH9162490.1;Name=HJH9162490.1;gbkey=CDS;gene=pilV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000527441.1;locus_tag=O5D79_000935;product=shufflon system plasmid conjugative transfer pilus tip adhesin PilV;protein_id=HJH9162490.1;transl_table=11 DALFDJ020000003.1 tpg pseudogene 258535 258918 . - . ID=gene-O5D79_000936;Name=O5D79_000936;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_000936;pseudo=true DALFDJ020000003.1 Protein Homology CDS 258535 258918 . - 0 ID=cds-O5D79_000936;Parent=gene-O5D79_000936;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000744278.1;locus_tag=O5D79_000936;product=phage tail protein;pseudo=true;transl_table=11 DALFDJ020000003.1 tpg pseudogene 259028 259804 . + . ID=gene-O5D79_000937;Name=O5D79_000937;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_000937;pseudo=true DALFDJ020000003.1 Protein Homology CDS 259028 259804 . + 0 ID=cds-O5D79_000937;Parent=gene-O5D79_000937;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF014281.6;locus_tag=O5D79_000937;product=Tar ligand binding domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000003.1 tpg pseudogene 259826 260572 . + . ID=gene-O5D79_000938;Name=O5D79_000938;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_000938;pseudo=true DALFDJ020000003.1 Protein Homology CDS 259826 260572 . + 0 ID=cds-O5D79_000938;Parent=gene-O5D79_000938;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF012245.6;locus_tag=O5D79_000938;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 DALFDJ020000003.1 tpg gene 260683 261822 . + . ID=gene-O5D79_000939;Name=O5D79_000939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000939 DALFDJ020000003.1 Protein Homology CDS 260683 261822 . + 0 ID=cds-HJH9162491.1;Parent=gene-O5D79_000939;Dbxref=NCBI_GP:HJH9162491.1;Name=HJH9162491.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750485.1;locus_tag=O5D79_000939;product=tyrosine-type recombinase/integrase;protein_id=HJH9162491.1;transl_table=11 DALFDJ020000003.1 tpg gene 261785 262384 . - . ID=gene-O5D79_000940;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=O5D79_000940 DALFDJ020000003.1 Protein Homology CDS 261785 262384 . - 0 ID=cds-HJH9162492.1;Parent=gene-O5D79_000940;Dbxref=NCBI_GP:HJH9162492.1;Name=HJH9162492.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005281771.1;locus_tag=O5D79_000940;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=HJH9162492.1;transl_table=11 DALFDJ020000003.1 tpg gene 263108 263410 . + . ID=gene-O5D79_000941;Name=O5D79_000941;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000941 DALFDJ020000003.1 GeneMarkS-2+ CDS 263108 263410 . + 0 ID=cds-HJH9162493.1;Parent=gene-O5D79_000941;Dbxref=NCBI_GP:HJH9162493.1;Name=HJH9162493.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_000941;product=hypothetical protein;protein_id=HJH9162493.1;transl_table=11 DALFDJ020000003.1 tpg gene 263850 264041 . + . ID=gene-O5D79_000942;Name=O5D79_000942;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000942 DALFDJ020000003.1 GeneMarkS-2+ CDS 263850 264041 . + 0 ID=cds-HJH9162494.1;Parent=gene-O5D79_000942;Dbxref=NCBI_GP:HJH9162494.1;Name=HJH9162494.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_000942;product=hypothetical protein;protein_id=HJH9162494.1;transl_table=11 DALFDJ020000003.1 tpg gene 264041 264289 . + . ID=gene-O5D79_000943;Name=O5D79_000943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000943 DALFDJ020000003.1 Protein Homology CDS 264041 264289 . + 0 ID=cds-HJH9162495.1;Parent=gene-O5D79_000943;Dbxref=NCBI_GP:HJH9162495.1;Name=HJH9162495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750481.1;locus_tag=O5D79_000943;product=DUF4222 domain-containing protein;protein_id=HJH9162495.1;transl_table=11 DALFDJ020000003.1 tpg gene 264603 265499 . + . ID=gene-O5D79_000944;Name=O5D79_000944;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000944 DALFDJ020000003.1 Protein Homology CDS 264603 265499 . + 0 ID=cds-HJH9162496.1;Parent=gene-O5D79_000944;Dbxref=NCBI_GP:HJH9162496.1;Name=HJH9162496.1;Ontology_term=GO:0032775,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009114919.1;locus_tag=O5D79_000944;product=DNA adenine methylase;protein_id=HJH9162496.1;transl_table=11 DALFDJ020000003.1 tpg gene 265546 265707 . + . ID=gene-O5D79_000945;Name=O5D79_000945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000945 DALFDJ020000003.1 GeneMarkS-2+ CDS 265546 265707 . + 0 ID=cds-HJH9162497.1;Parent=gene-O5D79_000945;Dbxref=NCBI_GP:HJH9162497.1;Name=HJH9162497.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_000945;product=hypothetical protein;protein_id=HJH9162497.1;transl_table=11 DALFDJ020000003.1 tpg gene 266524 267486 . + . ID=gene-O5D79_000946;Name=O5D79_000946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000946 DALFDJ020000003.1 Protein Homology CDS 266524 267486 . + 0 ID=cds-HJH9162498.1;Parent=gene-O5D79_000946;Dbxref=NCBI_GP:HJH9162498.1;Name=HJH9162498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000214158.1;locus_tag=O5D79_000946;product=hypothetical protein;protein_id=HJH9162498.1;transl_table=11 DALFDJ020000003.1 tpg gene 267509 268291 . + . ID=gene-O5D79_000947;Name=O5D79_000947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000947 DALFDJ020000003.1 Protein Homology CDS 267509 268291 . + 0 ID=cds-HJH9162499.1;Parent=gene-O5D79_000947;Dbxref=NCBI_GP:HJH9162499.1;Name=HJH9162499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750478.1;locus_tag=O5D79_000947;product=TIGR03759 family integrating conjugative element protein;protein_id=HJH9162499.1;transl_table=11 DALFDJ020000003.1 tpg gene 268270 268950 . + . ID=gene-O5D79_000948;Name=O5D79_000948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000948 DALFDJ020000003.1 Protein Homology CDS 268270 268950 . + 0 ID=cds-HJH9162500.1;Parent=gene-O5D79_000948;Dbxref=NCBI_GP:HJH9162500.1;Name=HJH9162500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750477.1;locus_tag=O5D79_000948;product=transglycosylase SLT domain-containing protein;protein_id=HJH9162500.1;transl_table=11 DALFDJ020000003.1 tpg gene 269018 269524 . + . ID=gene-O5D79_000949;Name=O5D79_000949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000949 DALFDJ020000003.1 Protein Homology CDS 269018 269524 . + 0 ID=cds-HJH9162501.1;Parent=gene-O5D79_000949;Dbxref=NCBI_GP:HJH9162501.1;Name=HJH9162501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016809424.1;locus_tag=O5D79_000949;product=integrating conjugative element protein;protein_id=HJH9162501.1;transl_table=11 DALFDJ020000003.1 tpg gene 269613 271817 . + . ID=gene-O5D79_000950;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=O5D79_000950 DALFDJ020000003.1 Protein Homology CDS 269613 271817 . + 0 ID=cds-HJH9162502.1;Parent=gene-O5D79_000950;Dbxref=NCBI_GP:HJH9162502.1;Name=HJH9162502.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750475.1;locus_tag=O5D79_000950;product=type IV conjugative transfer system coupling protein TraD;protein_id=HJH9162502.1;transl_table=11 DALFDJ020000003.1 tpg gene 271817 272563 . + . ID=gene-O5D79_000951;Name=O5D79_000951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000951 DALFDJ020000003.1 Protein Homology CDS 271817 272563 . + 0 ID=cds-HJH9162503.1;Parent=gene-O5D79_000951;Dbxref=NCBI_GP:HJH9162503.1;Name=HJH9162503.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750473.1;locus_tag=O5D79_000951;product=TIGR03747 family integrating conjugative element membrane protein;protein_id=HJH9162503.1;transl_table=11 DALFDJ020000003.1 tpg gene 272696 272932 . - . ID=gene-O5D79_000952;Name=O5D79_000952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000952 DALFDJ020000003.1 GeneMarkS-2+ CDS 272696 272932 . - 0 ID=cds-HJH9162504.1;Parent=gene-O5D79_000952;Dbxref=NCBI_GP:HJH9162504.1;Name=HJH9162504.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_000952;product=hypothetical protein;protein_id=HJH9162504.1;transl_table=11 DALFDJ020000003.1 tpg gene 273315 274220 . + . ID=gene-O5D79_000953;Name=O5D79_000953;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000953 DALFDJ020000003.1 Protein Homology CDS 273315 274220 . + 0 ID=cds-HJH9162505.1;Parent=gene-O5D79_000953;Dbxref=NCBI_GP:HJH9162505.1;Name=HJH9162505.1;Ontology_term=GO:0030001,GO:0005524,GO:0042626,GO:0046872,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,ABC-type transporter activity|0140359||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750470.1;locus_tag=O5D79_000953;product=metal ABC transporter substrate-binding protein;protein_id=HJH9162505.1;transl_table=11 DALFDJ020000003.1 tpg gene 274421 275143 . + . ID=gene-O5D79_000954;Name=O5D79_000954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000954 DALFDJ020000003.1 Protein Homology CDS 274421 275143 . + 0 ID=cds-HJH9162506.1;Parent=gene-O5D79_000954;Dbxref=NCBI_GP:HJH9162506.1;Name=HJH9162506.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025062.6;locus_tag=O5D79_000954;product=CZB domain-containing protein;protein_id=HJH9162506.1;transl_table=11 DALFDJ020000003.1 tpg gene 275269 275391 . + . ID=gene-O5D79_000955;Name=O5D79_000955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000955 DALFDJ020000003.1 GeneMarkS-2+ CDS 275269 275391 . + 0 ID=cds-HJH9162507.1;Parent=gene-O5D79_000955;Dbxref=NCBI_GP:HJH9162507.1;Name=HJH9162507.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_000955;product=hypothetical protein;protein_id=HJH9162507.1;transl_table=11 DALFDJ020000003.1 tpg gene 275513 275827 . + . ID=gene-O5D79_000956;Name=O5D79_000956;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000956 DALFDJ020000003.1 Protein Homology CDS 275513 275827 . + 0 ID=cds-HJH9162508.1;Parent=gene-O5D79_000956;Dbxref=NCBI_GP:HJH9162508.1;Name=HJH9162508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750468.1;locus_tag=O5D79_000956;product=RAQPRD family integrative conjugative element protein;protein_id=HJH9162508.1;transl_table=11 DALFDJ020000003.1 tpg gene 275824 276060 . + . ID=gene-O5D79_000957;Name=O5D79_000957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000957 DALFDJ020000003.1 Protein Homology CDS 275824 276060 . + 0 ID=cds-HJH9162509.1;Parent=gene-O5D79_000957;Dbxref=NCBI_GP:HJH9162509.1;Name=HJH9162509.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750467.1;locus_tag=O5D79_000957;product=TIGR03758 family integrating conjugative element protein;protein_id=HJH9162509.1;transl_table=11 DALFDJ020000003.1 tpg gene 276077 276415 . + . ID=gene-O5D79_000958;Name=O5D79_000958;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000958 DALFDJ020000003.1 Protein Homology CDS 276077 276415 . + 0 ID=cds-HJH9162510.1;Parent=gene-O5D79_000958;Dbxref=NCBI_GP:HJH9162510.1;Name=HJH9162510.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750466.1;locus_tag=O5D79_000958;product=TIGR03745 family integrating conjugative element membrane protein;protein_id=HJH9162510.1;transl_table=11 DALFDJ020000003.1 tpg gene 276431 276811 . + . ID=gene-O5D79_000959;Name=O5D79_000959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000959 DALFDJ020000003.1 Protein Homology CDS 276431 276811 . + 0 ID=cds-HJH9162511.1;Parent=gene-O5D79_000959;Dbxref=NCBI_GP:HJH9162511.1;Name=HJH9162511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750465.1;locus_tag=O5D79_000959;product=TIGR03750 family conjugal transfer protein;protein_id=HJH9162511.1;transl_table=11 DALFDJ020000003.1 tpg gene 276811 277467 . + . ID=gene-O5D79_000960;Name=O5D79_000960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000960 DALFDJ020000003.1 Protein Homology CDS 276811 277467 . + 0 ID=cds-HJH9162512.1;Parent=gene-O5D79_000960;Dbxref=NCBI_GP:HJH9162512.1;Name=HJH9162512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000086082.1;locus_tag=O5D79_000960;product=PFL_4703 family integrating conjugative element protein;protein_id=HJH9162512.1;transl_table=11 DALFDJ020000003.1 tpg gene 277464 278360 . + . ID=gene-O5D79_000961;Name=O5D79_000961;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000961 DALFDJ020000003.1 Protein Homology CDS 277464 278360 . + 0 ID=cds-HJH9162513.1;Parent=gene-O5D79_000961;Dbxref=NCBI_GP:HJH9162513.1;Name=HJH9162513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007372617.1;locus_tag=O5D79_000961;product=TIGR03749 family integrating conjugative element protein;protein_id=HJH9162513.1;transl_table=11 DALFDJ020000003.1 tpg gene 278360 279844 . + . ID=gene-O5D79_000962;Name=O5D79_000962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000962 DALFDJ020000003.1 Protein Homology CDS 278360 279844 . + 0 ID=cds-HJH9162514.1;Parent=gene-O5D79_000962;Dbxref=NCBI_GP:HJH9162514.1;Name=HJH9162514.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224030.1;locus_tag=O5D79_000962;product=TIGR03752 family integrating conjugative element protein;protein_id=HJH9162514.1;transl_table=11 DALFDJ020000003.1 tpg gene 279865 280272 . + . ID=gene-O5D79_000963;Name=O5D79_000963;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000963 DALFDJ020000003.1 Protein Homology CDS 279865 280272 . + 0 ID=cds-HJH9162515.1;Parent=gene-O5D79_000963;Dbxref=NCBI_GP:HJH9162515.1;Name=HJH9162515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011145435.1;locus_tag=O5D79_000963;product=TIGR03751 family conjugal transfer lipoprotein;protein_id=HJH9162515.1;transl_table=11 DALFDJ020000003.1 tpg gene 280273 283077 . + . ID=gene-O5D79_000964;Name=O5D79_000964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000964 DALFDJ020000003.1 Protein Homology CDS 280273 283077 . + 0 ID=cds-HJH9162516.1;Parent=gene-O5D79_000964;Dbxref=NCBI_GP:HJH9162516.1;Name=HJH9162516.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012822421.1;locus_tag=O5D79_000964;product=conjugative transfer ATPase;protein_id=HJH9162516.1;transl_table=11 DALFDJ020000003.1 tpg gene 283554 284024 . + . ID=gene-O5D79_000965;Name=O5D79_000965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000965 DALFDJ020000003.1 Protein Homology CDS 283554 284024 . + 0 ID=cds-HJH9162517.1;Parent=gene-O5D79_000965;Dbxref=NCBI_GP:HJH9162517.1;Name=HJH9162517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750463.1;locus_tag=O5D79_000965;product=universal stress protein;protein_id=HJH9162517.1;transl_table=11 ##sequence-region DALFDJ020000004.1 1 243661 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000004.1 tpg region 1 243661 . + . ID=DALFDJ020000004.1:1..243661;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000004.1 tpg gene 1 131 . + . ID=gene-O5D79_000966;Name=O5D79_000966;gbkey=Gene;gene_biotype=ncRNA;locus_tag=O5D79_000966 DALFDJ020000004.1 cmsearch ncRNA 1 131 . + . ID=rna-O5D79_000966;Parent=gene-O5D79_000966;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_000966;product=RtT sRNA DALFDJ020000004.1 cmsearch exon 1 131 . + . ID=exon-O5D79_000966-1;Parent=rna-O5D79_000966;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_000966;product=RtT sRNA DALFDJ020000004.1 tpg gene 314 679 . + . ID=gene-O5D79_000967;Name=O5D79_000967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000967 DALFDJ020000004.1 Protein Homology CDS 314 679 . + 0 ID=cds-HJH9162518.1;Parent=gene-O5D79_000967;Dbxref=NCBI_GP:HJH9162518.1;Name=HJH9162518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001091330.1;locus_tag=O5D79_000967;product=phage integrase central domain-containing protein;protein_id=HJH9162518.1;transl_table=11 DALFDJ020000004.1 tpg gene 1019 2986 . + . ID=gene-O5D79_000968;Name=O5D79_000968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000968 DALFDJ020000004.1 Protein Homology CDS 1019 2986 . + 0 ID=cds-HJH9162519.1;Parent=gene-O5D79_000968;Dbxref=NCBI_GP:HJH9162519.1;Name=HJH9162519.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000484537.1;locus_tag=O5D79_000968;product=AlbA family DNA-binding domain-containing protein;protein_id=HJH9162519.1;transl_table=11 DALFDJ020000004.1 tpg gene 3059 4066 . - . ID=gene-O5D79_000969;Name=O5D79_000969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000969 DALFDJ020000004.1 Protein Homology CDS 3059 4066 . - 0 ID=cds-HJH9162520.1;Parent=gene-O5D79_000969;Dbxref=NCBI_GP:HJH9162520.1;Name=HJH9162520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462535.1;locus_tag=O5D79_000969;product=substrate-binding domain-containing protein;protein_id=HJH9162520.1;transl_table=11 DALFDJ020000004.1 tpg gene 4216 5340 . + . ID=gene-O5D79_000970;Name=O5D79_000970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000970 DALFDJ020000004.1 Protein Homology CDS 4216 5340 . + 0 ID=cds-HJH9162521.1;Parent=gene-O5D79_000970;Dbxref=NCBI_GP:HJH9162521.1;Name=HJH9162521.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462534.1;locus_tag=O5D79_000970;product=aryl-sulfate sulfotransferase;protein_id=HJH9162521.1;transl_table=11 DALFDJ020000004.1 tpg gene 5398 6723 . + . ID=gene-O5D79_000971;Name=O5D79_000971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000971 DALFDJ020000004.1 Protein Homology CDS 5398 6723 . + 0 ID=cds-HJH9162522.1;Parent=gene-O5D79_000971;Dbxref=NCBI_GP:HJH9162522.1;Name=HJH9162522.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462533.1;locus_tag=O5D79_000971;product=uracil-xanthine permease family protein;protein_id=HJH9162522.1;transl_table=11 DALFDJ020000004.1 tpg gene 7279 8886 . + . ID=gene-O5D79_000972;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=O5D79_000972 DALFDJ020000004.1 Protein Homology CDS 7279 8886 . + 0 ID=cds-HJH9162523.1;Parent=gene-O5D79_000972;Dbxref=NCBI_GP:HJH9162523.1;Name=HJH9162523.1;Ontology_term=GO:0042938,GO:0071916,GO:0030288;gbkey=CDS;gene=dppA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=O5D79_000972;product=dipeptide ABC transporter periplasmic-binding protein DppA;protein_id=HJH9162523.1;transl_table=11 DALFDJ020000004.1 tpg gene 9043 10062 . + . ID=gene-O5D79_000973;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=O5D79_000973 DALFDJ020000004.1 Protein Homology CDS 9043 10062 . + 0 ID=cds-HJH9162524.1;Parent=gene-O5D79_000973;Dbxref=NCBI_GP:HJH9162524.1;Name=HJH9162524.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=O5D79_000973;product=dipeptide ABC transporter permease DppB;protein_id=HJH9162524.1;transl_table=11 DALFDJ020000004.1 tpg gene 10072 10974 . + . ID=gene-O5D79_000974;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=O5D79_000974 DALFDJ020000004.1 Protein Homology CDS 10072 10974 . + 0 ID=cds-HJH9162525.1;Parent=gene-O5D79_000974;Dbxref=NCBI_GP:HJH9162525.1;Name=HJH9162525.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=O5D79_000974;product=dipeptide ABC transporter permease DppC;protein_id=HJH9162525.1;transl_table=11 DALFDJ020000004.1 tpg gene 10985 11968 . + . ID=gene-O5D79_000975;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=O5D79_000975 DALFDJ020000004.1 Protein Homology CDS 10985 11968 . + 0 ID=cds-HJH9162526.1;Parent=gene-O5D79_000975;Dbxref=NCBI_GP:HJH9162526.1;Name=HJH9162526.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462529.1;locus_tag=O5D79_000975;product=dipeptide ABC transporter ATP-binding protein;protein_id=HJH9162526.1;transl_table=11 DALFDJ020000004.1 tpg gene 11965 12978 . + . ID=gene-O5D79_000976;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=O5D79_000976 DALFDJ020000004.1 Protein Homology CDS 11965 12978 . + 0 ID=cds-HJH9162527.1;Parent=gene-O5D79_000976;Dbxref=NCBI_GP:HJH9162527.1;Name=HJH9162527.1;Ontology_term=GO:0042938,GO:0071916,GO:0016020;gbkey=CDS;gene=dppF;go_component=membrane|0016020||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462528.1;locus_tag=O5D79_000976;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=HJH9162527.1;transl_table=11 DALFDJ020000004.1 tpg gene 13079 14377 . - . ID=gene-O5D79_000977;Name=O5D79_000977;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000977 DALFDJ020000004.1 Protein Homology CDS 13079 14377 . - 0 ID=cds-HJH9162528.1;Parent=gene-O5D79_000977;Dbxref=NCBI_GP:HJH9162528.1;Name=HJH9162528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462527.1;locus_tag=O5D79_000977;product=amino acid permease;protein_id=HJH9162528.1;transl_table=11 DALFDJ020000004.1 tpg pseudogene 14495 14698 . - . ID=gene-O5D79_000978;Name=O5D79_000978;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_000978;pseudo=true DALFDJ020000004.1 Protein Homology CDS 14495 14698 . - 0 ID=cds-O5D79_000978;Parent=gene-O5D79_000978;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008812697.1;locus_tag=O5D79_000978;product=PLP-dependent transferase;pseudo=true;transl_table=11 DALFDJ020000004.1 tpg gene 15020 15127 . + . ID=gene-O5D79_000979;Name=O5D79_000979;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000979 DALFDJ020000004.1 Protein Homology CDS 15020 15127 . + 0 ID=cds-HJH9162529.1;Parent=gene-O5D79_000979;Dbxref=NCBI_GP:HJH9162529.1;Name=HJH9162529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=O5D79_000979;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=HJH9162529.1;transl_table=11 DALFDJ020000004.1 tpg gene 15209 16888 . - . ID=gene-O5D79_000980;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=O5D79_000980 DALFDJ020000004.1 Protein Homology CDS 15209 16888 . - 0 ID=cds-HJH9162530.1;Parent=gene-O5D79_000980;Dbxref=NCBI_GP:HJH9162530.1;Name=HJH9162530.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462525.1;locus_tag=O5D79_000980;product=cellulose biosynthesis protein BcsG;protein_id=HJH9162530.1;transl_table=11 DALFDJ020000004.1 tpg gene 16885 17076 . - . ID=gene-O5D79_000981;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=O5D79_000981 DALFDJ020000004.1 Protein Homology CDS 16885 17076 . - 0 ID=cds-HJH9162531.1;Parent=gene-O5D79_000981;Dbxref=NCBI_GP:HJH9162531.1;Name=HJH9162531.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462524.1;locus_tag=O5D79_000981;product=cellulose biosynthesis protein BcsF;protein_id=HJH9162531.1;transl_table=11 DALFDJ020000004.1 tpg gene 17073 18644 . - . ID=gene-O5D79_000982;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=O5D79_000982 DALFDJ020000004.1 Protein Homology CDS 17073 18644 . - 0 ID=cds-HJH9162532.1;Parent=gene-O5D79_000982;Dbxref=NCBI_GP:HJH9162532.1;Name=HJH9162532.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462523.1;locus_tag=O5D79_000982;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=HJH9162532.1;transl_table=11 DALFDJ020000004.1 tpg gene 18889 19092 . + . ID=gene-O5D79_000983;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=O5D79_000983 DALFDJ020000004.1 Protein Homology CDS 18889 19092 . + 0 ID=cds-HJH9162533.1;Parent=gene-O5D79_000983;Dbxref=NCBI_GP:HJH9162533.1;Name=HJH9162533.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462522.1;locus_tag=O5D79_000983;product=cellulose biosynthesis protein BcsR;protein_id=HJH9162533.1;transl_table=11 DALFDJ020000004.1 tpg gene 19093 19845 . + . ID=gene-O5D79_000984;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=O5D79_000984 DALFDJ020000004.1 Protein Homology CDS 19093 19845 . + 0 ID=cds-HJH9162534.1;Parent=gene-O5D79_000984;Dbxref=NCBI_GP:HJH9162534.1;Name=HJH9162534.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462521.1;locus_tag=O5D79_000984;product=cellulose biosynthesis protein BcsQ;protein_id=HJH9162534.1;transl_table=11 DALFDJ020000004.1 tpg gene 19842 22466 . + . ID=gene-O5D79_000985;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=O5D79_000985 DALFDJ020000004.1 Protein Homology CDS 19842 22466 . + 0 ID=cds-HJH9162535.1;Parent=gene-O5D79_000985;Dbxref=NCBI_GP:HJH9162535.1;Name=HJH9162535.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462520.1;locus_tag=O5D79_000985;product=UDP-forming cellulose synthase catalytic subunit;protein_id=HJH9162535.1;transl_table=11 DALFDJ020000004.1 tpg gene 22477 24777 . + . ID=gene-O5D79_000986;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=O5D79_000986 DALFDJ020000004.1 Protein Homology CDS 22477 24777 . + 0 ID=cds-HJH9162536.1;Parent=gene-O5D79_000986;Dbxref=NCBI_GP:HJH9162536.1;Name=HJH9162536.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462519.1;locus_tag=O5D79_000986;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=HJH9162536.1;transl_table=11 DALFDJ020000004.1 tpg gene 24781 25890 . + . ID=gene-O5D79_000987;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=O5D79_000987 DALFDJ020000004.1 Protein Homology CDS 24781 25890 . + 0 ID=cds-HJH9162537.1;Parent=gene-O5D79_000987;Dbxref=NCBI_GP:HJH9162537.1;Name=HJH9162537.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462518.1;locus_tag=O5D79_000987;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=HJH9162537.1;transl_table=11 DALFDJ020000004.1 tpg gene 25872 29414 . + . ID=gene-O5D79_000988;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=O5D79_000988 DALFDJ020000004.1 Protein Homology CDS 25872 29414 . + 0 ID=cds-HJH9162538.1;Parent=gene-O5D79_000988;Dbxref=NCBI_GP:HJH9162538.1;Name=HJH9162538.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462517.1;locus_tag=O5D79_000988;product=cellulose synthase complex outer membrane protein BcsC;protein_id=HJH9162538.1;transl_table=11 DALFDJ020000004.1 tpg gene 29588 31594 . + . ID=gene-O5D79_000989;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=O5D79_000989 DALFDJ020000004.1 Protein Homology CDS 29588 31594 . + 0 ID=cds-HJH9162539.1;Parent=gene-O5D79_000989;Dbxref=NCBI_GP:HJH9162539.1;Name=HJH9162539.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001266355.1;locus_tag=O5D79_000989;product=biofilm formation regulator HmsP;protein_id=HJH9162539.1;transl_table=11 DALFDJ020000004.1 tpg gene 31752 33038 . + . ID=gene-O5D79_000990;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=O5D79_000990 DALFDJ020000004.1 Protein Homology CDS 31752 33038 . + 0 ID=cds-HJH9162540.1;Parent=gene-O5D79_000990;Dbxref=NCBI_GP:HJH9162540.1;Name=HJH9162540.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462515.1;locus_tag=O5D79_000990;product=C4-dicarboxylate transporter DctC;protein_id=HJH9162540.1;transl_table=11 DALFDJ020000004.1 tpg gene 33258 34745 . + . ID=gene-O5D79_000991;Name=O5D79_000991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000991 DALFDJ020000004.1 Protein Homology CDS 33258 34745 . + 0 ID=cds-HJH9162541.1;Parent=gene-O5D79_000991;Dbxref=NCBI_GP:HJH9162541.1;Name=HJH9162541.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462514.1;locus_tag=O5D79_000991;product=M16 family metallopeptidase;protein_id=HJH9162541.1;transl_table=11 DALFDJ020000004.1 tpg gene 34799 35728 . - . ID=gene-O5D79_000992;Name=O5D79_000992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000992 DALFDJ020000004.1 Protein Homology CDS 34799 35728 . - 0 ID=cds-HJH9162542.1;Parent=gene-O5D79_000992;Dbxref=NCBI_GP:HJH9162542.1;Name=HJH9162542.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462513.1;locus_tag=O5D79_000992;product=sugar kinase;protein_id=HJH9162542.1;transl_table=11 DALFDJ020000004.1 tpg gene 35958 36725 . + . ID=gene-O5D79_000993;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=O5D79_000993 DALFDJ020000004.1 Protein Homology CDS 35958 36725 . + 0 ID=cds-HJH9162543.1;Parent=gene-O5D79_000993;Dbxref=NCBI_GP:HJH9162543.1;Name=HJH9162543.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462512.1;locus_tag=O5D79_000993;product=cyclic-guanylate-specific phosphodiesterase;protein_id=HJH9162543.1;transl_table=11 DALFDJ020000004.1 tpg gene 36835 38895 . + . ID=gene-O5D79_000994;Name=O5D79_000994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000994 DALFDJ020000004.1 Protein Homology CDS 36835 38895 . + 0 ID=cds-HJH9162544.1;Parent=gene-O5D79_000994;Dbxref=NCBI_GP:HJH9162544.1;Name=HJH9162544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462511.1;locus_tag=O5D79_000994;product=AsmA family protein;protein_id=HJH9162544.1;transl_table=11 DALFDJ020000004.1 tpg gene 38935 40257 . - . ID=gene-O5D79_000995;Name=O5D79_000995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000995 DALFDJ020000004.1 Protein Homology CDS 38935 40257 . - 0 ID=cds-HJH9162545.1;Parent=gene-O5D79_000995;Dbxref=NCBI_GP:HJH9162545.1;Name=HJH9162545.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462510.1;locus_tag=O5D79_000995;product=MFS transporter;protein_id=HJH9162545.1;transl_table=11 DALFDJ020000004.1 tpg gene 40608 41636 . - . ID=gene-O5D79_000996;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=O5D79_000996 DALFDJ020000004.1 Protein Homology CDS 40608 41636 . - 0 ID=cds-HJH9162546.1;Parent=gene-O5D79_000996;Dbxref=NCBI_GP:HJH9162546.1;Name=HJH9162546.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462509.1;locus_tag=O5D79_000996;product=inner membrane protein YhjD;protein_id=HJH9162546.1;transl_table=11 DALFDJ020000004.1 tpg gene 41709 42608 . - . ID=gene-O5D79_000997;Name=O5D79_000997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000997 DALFDJ020000004.1 Protein Homology CDS 41709 42608 . - 0 ID=cds-HJH9162547.1;Parent=gene-O5D79_000997;Dbxref=NCBI_GP:HJH9162547.1;Name=HJH9162547.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462508.1;locus_tag=O5D79_000997;product=LysR family transcriptional regulator;protein_id=HJH9162547.1;transl_table=11 DALFDJ020000004.1 tpg gene 43239 43841 . + . ID=gene-O5D79_000998;Name=O5D79_000998;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000998 DALFDJ020000004.1 Protein Homology CDS 43239 43841 . + 0 ID=cds-HJH9162548.1;Parent=gene-O5D79_000998;Dbxref=NCBI_GP:HJH9162548.1;Name=HJH9162548.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462507.1;locus_tag=O5D79_000998;product=response regulator transcription factor;protein_id=HJH9162548.1;transl_table=11 DALFDJ020000004.1 tpg gene 43847 44203 . - . ID=gene-O5D79_000999;Name=O5D79_000999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_000999 DALFDJ020000004.1 Protein Homology CDS 43847 44203 . - 0 ID=cds-HJH9162549.1;Parent=gene-O5D79_000999;Dbxref=NCBI_GP:HJH9162549.1;Name=HJH9162549.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462506.1;locus_tag=O5D79_000999;product=glycoside hydrolase family protein;protein_id=HJH9162549.1;transl_table=11 DALFDJ020000004.1 tpg gene 44484 46073 . + . ID=gene-O5D79_001000;Name=O5D79_001000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001000 DALFDJ020000004.1 Protein Homology CDS 44484 46073 . + 0 ID=cds-HJH9162550.1;Parent=gene-O5D79_001000;Dbxref=NCBI_GP:HJH9162550.1;Name=HJH9162550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462505.1;locus_tag=O5D79_001000;product=STY4199 family HEPN domain-containing protein;protein_id=HJH9162550.1;transl_table=11 DALFDJ020000004.1 tpg gene 46086 47735 . - . ID=gene-O5D79_001001;Name=O5D79_001001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001001 DALFDJ020000004.1 Protein Homology CDS 46086 47735 . - 0 ID=cds-HJH9162551.1;Parent=gene-O5D79_001001;Dbxref=NCBI_GP:HJH9162551.1;Name=HJH9162551.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=O5D79_001001;product=alpha%2Calpha-trehalase;protein_id=HJH9162551.1;transl_table=11 DALFDJ020000004.1 tpg gene 48060 48779 . + . ID=gene-O5D79_001002;Name=O5D79_001002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001002 DALFDJ020000004.1 Protein Homology CDS 48060 48779 . + 0 ID=cds-HJH9162552.1;Parent=gene-O5D79_001002;Dbxref=NCBI_GP:HJH9162552.1;Name=HJH9162552.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462503.1;locus_tag=O5D79_001002;product=GntR family transcriptional regulator;protein_id=HJH9162552.1;transl_table=11 DALFDJ020000004.1 tpg gene 48955 49932 . + . ID=gene-O5D79_001003;Name=fraB;gbkey=Gene;gene=fraB;gene_biotype=protein_coding;locus_tag=O5D79_001003 DALFDJ020000004.1 Protein Homology CDS 48955 49932 . + 0 ID=cds-HJH9162553.1;Parent=gene-O5D79_001003;Dbxref=NCBI_GP:HJH9162553.1;Name=HJH9162553.1;gbkey=CDS;gene=fraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462502.1;locus_tag=O5D79_001003;product=6-phosphofructose-aspartate deglycase;protein_id=HJH9162553.1;transl_table=11 DALFDJ020000004.1 tpg gene 49996 50841 . + . ID=gene-O5D79_001004;Name=fraD;gbkey=Gene;gene=fraD;gene_biotype=protein_coding;locus_tag=O5D79_001004 DALFDJ020000004.1 Protein Homology CDS 49996 50841 . + 0 ID=cds-HJH9162554.1;Parent=gene-O5D79_001004;Dbxref=NCBI_GP:HJH9162554.1;Name=HJH9162554.1;gbkey=CDS;gene=fraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462501.1;locus_tag=O5D79_001004;product=fructose-aspartate kinase;protein_id=HJH9162554.1;transl_table=11 DALFDJ020000004.1 tpg gene 50895 52214 . + . ID=gene-O5D79_001005;Name=O5D79_001005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001005 DALFDJ020000004.1 Protein Homology CDS 50895 52214 . + 0 ID=cds-HJH9162555.1;Parent=gene-O5D79_001005;Dbxref=NCBI_GP:HJH9162555.1;Name=HJH9162555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462500.1;locus_tag=O5D79_001005;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=HJH9162555.1;transl_table=11 DALFDJ020000004.1 tpg pseudogene 52273 52644 . + . ID=gene-O5D79_001006;Name=fraE;gbkey=Gene;gene=fraE;gene_biotype=pseudogene;locus_tag=O5D79_001006;pseudo=true DALFDJ020000004.1 Protein Homology CDS 52273 52644 . + 0 ID=cds-O5D79_001006;Parent=gene-O5D79_001006;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=fraE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=O5D79_001006;product=fructose-asparagine asparaginase;pseudo=true;transl_table=11 DALFDJ020000004.1 tpg pseudogene 52793 52873 . + . ID=gene-O5D79_001007;Name=O5D79_001007;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001007;pseudo=true DALFDJ020000004.1 Protein Homology CDS 52793 52873 . + 0 ID=cds-O5D79_001007;Parent=gene-O5D79_001007;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226344.1;locus_tag=O5D79_001007;product=asparaginase domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000004.1 tpg pseudogene 52866 52997 . + . ID=gene-O5D79_001008;Name=O5D79_001008;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001008;pseudo=true DALFDJ020000004.1 Protein Homology CDS 52866 52997 . + 0 ID=cds-O5D79_001008;Parent=gene-O5D79_001008;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462499.1;locus_tag=O5D79_001008;product=L-asparaginase;pseudo=true;transl_table=11 DALFDJ020000004.1 tpg gene 53044 54396 . - . ID=gene-O5D79_001009;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=O5D79_001009 DALFDJ020000004.1 Protein Homology CDS 53044 54396 . - 0 ID=cds-HJH9162556.1;Parent=gene-O5D79_001009;Dbxref=NCBI_GP:HJH9162556.1;Name=HJH9162556.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=O5D79_001009;product=glutathione-disulfide reductase;protein_id=HJH9162556.1;transl_table=11 DALFDJ020000004.1 tpg gene 54501 55343 . - . ID=gene-O5D79_001010;Name=O5D79_001010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001010 DALFDJ020000004.1 Protein Homology CDS 54501 55343 . - 0 ID=cds-HJH9162557.1;Parent=gene-O5D79_001010;Dbxref=NCBI_GP:HJH9162557.1;Name=HJH9162557.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=O5D79_001010;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=HJH9162557.1;transl_table=11 DALFDJ020000004.1 tpg gene 55967 56620 . + . ID=gene-O5D79_001011;Name=O5D79_001011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001011 DALFDJ020000004.1 Protein Homology CDS 55967 56620 . + 0 ID=cds-HJH9162558.1;Parent=gene-O5D79_001011;Dbxref=NCBI_GP:HJH9162558.1;Name=HJH9162558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000469196.1;locus_tag=O5D79_001011;product=hypothetical protein;protein_id=HJH9162558.1;transl_table=11 DALFDJ020000004.1 tpg gene 56783 58825 . + . ID=gene-O5D79_001012;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=O5D79_001012 DALFDJ020000004.1 Protein Homology CDS 56783 58825 . + 0 ID=cds-HJH9162559.1;Parent=gene-O5D79_001012;Dbxref=NCBI_GP:HJH9162559.1;Name=HJH9162559.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=O5D79_001012;product=oligopeptidase A;protein_id=HJH9162559.1;transl_table=11 DALFDJ020000004.1 tpg gene 58832 59590 . + . ID=gene-O5D79_001013;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=O5D79_001013 DALFDJ020000004.1 Protein Homology CDS 58832 59590 . + 0 ID=cds-HJH9162560.1;Parent=gene-O5D79_001013;Dbxref=NCBI_GP:HJH9162560.1;Name=HJH9162560.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462494.1;locus_tag=O5D79_001013;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=HJH9162560.1;transl_table=11 DALFDJ020000004.1 tpg gene 59682 61154 . - . ID=gene-O5D79_001014;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=O5D79_001014 DALFDJ020000004.1 Protein Homology CDS 59682 61154 . - 0 ID=cds-HJH9162561.1;Parent=gene-O5D79_001014;Dbxref=NCBI_GP:HJH9162561.1;Name=HJH9162561.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462493.1;locus_tag=O5D79_001014;product=dipeptide/tripeptide permease DtpB;protein_id=HJH9162561.1;transl_table=11 DALFDJ020000004.1 tpg gene 61479 61913 . - . ID=gene-O5D79_001015;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=O5D79_001015 DALFDJ020000004.1 Protein Homology CDS 61479 61913 . - 0 ID=cds-HJH9162562.1;Parent=gene-O5D79_001015;Dbxref=NCBI_GP:HJH9162562.1;Name=HJH9162562.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462492.1;locus_tag=O5D79_001015;product=universal stress protein UspA;protein_id=HJH9162562.1;transl_table=11 DALFDJ020000004.1 tpg gene 62301 62636 . + . ID=gene-O5D79_001016;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=O5D79_001016 DALFDJ020000004.1 Protein Homology CDS 62301 62636 . + 0 ID=cds-HJH9162563.1;Parent=gene-O5D79_001016;Dbxref=NCBI_GP:HJH9162563.1;Name=HJH9162563.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462491.1;locus_tag=O5D79_001016;product=universal stress protein UspB;protein_id=HJH9162563.1;transl_table=11 DALFDJ020000004.1 tpg gene 62777 64273 . - . ID=gene-O5D79_001017;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=O5D79_001017 DALFDJ020000004.1 Protein Homology CDS 62777 64273 . - 0 ID=cds-HJH9162564.1;Parent=gene-O5D79_001017;Dbxref=NCBI_GP:HJH9162564.1;Name=HJH9162564.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462490.1;locus_tag=O5D79_001017;product=inorganic phosphate transporter PitA;protein_id=HJH9162564.1;transl_table=11 DALFDJ020000004.1 tpg gene 64504 65700 . + . ID=gene-O5D79_001018;Name=O5D79_001018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001018 DALFDJ020000004.1 Protein Homology CDS 64504 65700 . + 0 ID=cds-HJH9162565.1;Parent=gene-O5D79_001018;Dbxref=NCBI_GP:HJH9162565.1;Name=HJH9162565.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462489.1;locus_tag=O5D79_001018;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=HJH9162565.1;transl_table=11 DALFDJ020000004.1 tpg gene 66006 67073 . + . ID=gene-O5D79_001019;Name=O5D79_001019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001019 DALFDJ020000004.1 Protein Homology CDS 66006 67073 . + 0 ID=cds-HJH9162566.1;Parent=gene-O5D79_001019;Dbxref=NCBI_GP:HJH9162566.1;Name=HJH9162566.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462488.1;locus_tag=O5D79_001019;product=HlyD family secretion protein;protein_id=HJH9162566.1;transl_table=11 DALFDJ020000004.1 tpg gene 67070 69811 . + . ID=gene-O5D79_001020;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=O5D79_001020 DALFDJ020000004.1 Protein Homology CDS 67070 69811 . + 0 ID=cds-HJH9162567.1;Parent=gene-O5D79_001020;Dbxref=NCBI_GP:HJH9162567.1;Name=HJH9162567.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709254.1;locus_tag=O5D79_001020;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=HJH9162567.1;transl_table=11 DALFDJ020000004.1 tpg gene 69811 70935 . + . ID=gene-O5D79_001021;Name=O5D79_001021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001021 DALFDJ020000004.1 Protein Homology CDS 69811 70935 . + 0 ID=cds-HJH9162568.1;Parent=gene-O5D79_001021;Dbxref=NCBI_GP:HJH9162568.1;Name=HJH9162568.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462486.1;locus_tag=O5D79_001021;product=ABC transporter permease;protein_id=HJH9162568.1;transl_table=11 DALFDJ020000004.1 tpg gene 71025 71426 . - . ID=gene-O5D79_001022;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=O5D79_001022 DALFDJ020000004.1 Protein Homology CDS 71025 71426 . - 0 ID=cds-HJH9162569.1;Parent=gene-O5D79_001022;Dbxref=NCBI_GP:HJH9162569.1;Name=HJH9162569.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462485.1;locus_tag=O5D79_001022;product=nickel-responsive transcriptional regulator NikR;protein_id=HJH9162569.1;transl_table=11 DALFDJ020000004.1 tpg gene 71518 72096 . - . ID=gene-O5D79_001023;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=O5D79_001023 DALFDJ020000004.1 Protein Homology CDS 71518 72096 . - 0 ID=cds-HJH9162570.1;Parent=gene-O5D79_001023;Dbxref=NCBI_GP:HJH9162570.1;Name=HJH9162570.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462484.1;locus_tag=O5D79_001023;product=4'-phosphopantetheinyl transferase AcpT;protein_id=HJH9162570.1;transl_table=11 DALFDJ020000004.1 tpg gene 72148 73197 . - . ID=gene-O5D79_001024;Name=O5D79_001024;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001024 DALFDJ020000004.1 Protein Homology CDS 72148 73197 . - 0 ID=cds-HJH9162571.1;Parent=gene-O5D79_001024;Dbxref=NCBI_GP:HJH9162571.1;Name=HJH9162571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=O5D79_001024;product=AI-2E family transporter;protein_id=HJH9162571.1;transl_table=11 DALFDJ020000004.1 tpg gene 73287 74546 . + . ID=gene-O5D79_001025;Name=O5D79_001025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001025 DALFDJ020000004.1 Protein Homology CDS 73287 74546 . + 0 ID=cds-HJH9162572.1;Parent=gene-O5D79_001025;Dbxref=NCBI_GP:HJH9162572.1;Name=HJH9162572.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462482.3;locus_tag=O5D79_001025;product=MFS transporter;protein_id=HJH9162572.1;transl_table=11 DALFDJ020000004.1 tpg gene 74550 75107 . - . ID=gene-O5D79_001026;Name=O5D79_001026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001026 DALFDJ020000004.1 Protein Homology CDS 74550 75107 . - 0 ID=cds-HJH9162573.1;Parent=gene-O5D79_001026;Dbxref=NCBI_GP:HJH9162573.1;Name=HJH9162573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462481.1;locus_tag=O5D79_001026;product=DcrB family lipoprotein;protein_id=HJH9162573.1;transl_table=11 DALFDJ020000004.1 tpg gene 75180 75845 . - . ID=gene-O5D79_001027;Name=O5D79_001027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001027 DALFDJ020000004.1 Protein Homology CDS 75180 75845 . - 0 ID=cds-HJH9162574.1;Parent=gene-O5D79_001027;Dbxref=NCBI_GP:HJH9162574.1;Name=HJH9162574.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462480.1;locus_tag=O5D79_001027;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=HJH9162574.1;transl_table=11 DALFDJ020000004.1 tpg gene 76015 76260 . + . ID=gene-O5D79_001028;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=O5D79_001028 DALFDJ020000004.1 Protein Homology CDS 76015 76260 . + 0 ID=cds-HJH9162575.1;Parent=gene-O5D79_001028;Dbxref=NCBI_GP:HJH9162575.1;Name=HJH9162575.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462479.1;locus_tag=O5D79_001028;product=sulfurtransferase TusA;protein_id=HJH9162575.1;transl_table=11 DALFDJ020000004.1 tpg gene 76284 77927 . - . ID=gene-O5D79_001029;Name=tcp;gbkey=Gene;gene=tcp;gene_biotype=protein_coding;locus_tag=O5D79_001029 DALFDJ020000004.1 Protein Homology CDS 76284 77927 . - 0 ID=cds-HJH9162576.1;Parent=gene-O5D79_001029;Dbxref=NCBI_GP:HJH9162576.1;Name=HJH9162576.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888;gbkey=CDS;gene=tcp;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462478.1;locus_tag=O5D79_001029;product=methyl-accepting chemotaxis citrate transducer;protein_id=HJH9162576.1;transl_table=11 DALFDJ020000004.1 tpg gene 78127 80325 . - . ID=gene-O5D79_001030;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=O5D79_001030 DALFDJ020000004.1 Protein Homology CDS 78127 80325 . - 0 ID=cds-HJH9162577.1;Parent=gene-O5D79_001030;Dbxref=NCBI_GP:HJH9162577.1;Name=HJH9162577.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462477.1;locus_tag=O5D79_001030;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=HJH9162577.1;transl_table=11 DALFDJ020000004.1 tpg gene 80406 81032 . - . ID=gene-O5D79_001031;Name=O5D79_001031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001031 DALFDJ020000004.1 Protein Homology CDS 80406 81032 . - 0 ID=cds-HJH9162578.1;Parent=gene-O5D79_001031;Dbxref=NCBI_GP:HJH9162578.1;Name=HJH9162578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462476.1;locus_tag=O5D79_001031;product=lysoplasmalogenase;protein_id=HJH9162578.1;transl_table=11 DALFDJ020000004.1 tpg gene 81174 81545 . + . ID=gene-O5D79_001032;Name=O5D79_001032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001032 DALFDJ020000004.1 Protein Homology CDS 81174 81545 . + 0 ID=cds-HJH9162579.1;Parent=gene-O5D79_001032;Dbxref=NCBI_GP:HJH9162579.1;Name=HJH9162579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462475.1;locus_tag=O5D79_001032;product=DUF2500 domain-containing protein;protein_id=HJH9162579.1;transl_table=11 DALFDJ020000004.1 tpg gene 81567 81836 . - . ID=gene-O5D79_001033;Name=O5D79_001033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001033 DALFDJ020000004.1 Protein Homology CDS 81567 81836 . - 0 ID=cds-HJH9162580.1;Parent=gene-O5D79_001033;Dbxref=NCBI_GP:HJH9162580.1;Name=HJH9162580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=O5D79_001033;product=DUF1145 family protein;protein_id=HJH9162580.1;transl_table=11 DALFDJ020000004.1 tpg gene 81826 82422 . - . ID=gene-O5D79_001034;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=O5D79_001034 DALFDJ020000004.1 Protein Homology CDS 81826 82422 . - 0 ID=cds-HJH9162581.1;Parent=gene-O5D79_001034;Dbxref=NCBI_GP:HJH9162581.1;Name=HJH9162581.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462473.1;locus_tag=O5D79_001034;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=HJH9162581.1;transl_table=11 DALFDJ020000004.1 tpg gene 82548 84023 . + . ID=gene-O5D79_001035;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=O5D79_001035 DALFDJ020000004.1 Protein Homology CDS 82548 84023 . + 0 ID=cds-HJH9162582.1;Parent=gene-O5D79_001035;Dbxref=NCBI_GP:HJH9162582.1;Name=HJH9162582.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462472.1;locus_tag=O5D79_001035;product=signal recognition particle-docking protein FtsY;protein_id=HJH9162582.1;transl_table=11 DALFDJ020000004.1 tpg gene 84026 84694 . + . ID=gene-O5D79_001036;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=O5D79_001036 DALFDJ020000004.1 Protein Homology CDS 84026 84694 . + 0 ID=cds-HJH9162583.1;Parent=gene-O5D79_001036;Dbxref=NCBI_GP:HJH9162583.1;Name=HJH9162583.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462471.1;locus_tag=O5D79_001036;product=cell division ATP-binding protein FtsE;protein_id=HJH9162583.1;transl_table=11 DALFDJ020000004.1 tpg gene 84687 85742 . + . ID=gene-O5D79_001037;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=O5D79_001037 DALFDJ020000004.1 Protein Homology CDS 84687 85742 . + 0 ID=cds-HJH9162584.1;Parent=gene-O5D79_001037;Dbxref=NCBI_GP:HJH9162584.1;Name=HJH9162584.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=O5D79_001037;product=permease-like cell division protein FtsX;protein_id=HJH9162584.1;transl_table=11 DALFDJ020000004.1 tpg gene 85988 86842 . + . ID=gene-O5D79_001038;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=O5D79_001038 DALFDJ020000004.1 Protein Homology CDS 85988 86842 . + 0 ID=cds-HJH9162585.1;Parent=gene-O5D79_001038;Dbxref=NCBI_GP:HJH9162585.1;Name=HJH9162585.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462469.1;locus_tag=O5D79_001038;product=RNA polymerase sigma factor RpoH;protein_id=HJH9162585.1;transl_table=11 DALFDJ020000004.1 tpg gene 87164 88267 . + . ID=gene-O5D79_001039;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=O5D79_001039 DALFDJ020000004.1 Protein Homology CDS 87164 88267 . + 0 ID=cds-HJH9162586.1;Parent=gene-O5D79_001039;Dbxref=NCBI_GP:HJH9162586.1;Name=HJH9162586.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=O5D79_001039;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=HJH9162586.1;transl_table=11 DALFDJ020000004.1 tpg gene 88351 88485 . - . ID=gene-O5D79_001040;Name=O5D79_001040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001040 DALFDJ020000004.1 Protein Homology CDS 88351 88485 . - 0 ID=cds-HJH9162587.1;Parent=gene-O5D79_001040;Dbxref=NCBI_GP:HJH9162587.1;Name=HJH9162587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462467.1;locus_tag=O5D79_001040;product=hypothetical protein;protein_id=HJH9162587.1;transl_table=11 DALFDJ020000004.1 tpg gene 88463 88846 . - . ID=gene-O5D79_001041;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=O5D79_001041 DALFDJ020000004.1 Protein Homology CDS 88463 88846 . - 0 ID=cds-HJH9162588.1;Parent=gene-O5D79_001041;Dbxref=NCBI_GP:HJH9162588.1;Name=HJH9162588.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462466.1;locus_tag=O5D79_001041;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=HJH9162588.1;transl_table=11 DALFDJ020000004.1 tpg gene 89268 90377 . + . ID=gene-O5D79_001042;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=O5D79_001042 DALFDJ020000004.1 Protein Homology CDS 89268 90377 . + 0 ID=cds-HJH9162589.1;Parent=gene-O5D79_001042;Dbxref=NCBI_GP:HJH9162589.1;Name=HJH9162589.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462465.1;locus_tag=O5D79_001042;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=HJH9162589.1;transl_table=11 DALFDJ020000004.1 tpg gene 90437 91363 . + . ID=gene-O5D79_001043;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=O5D79_001043 DALFDJ020000004.1 Protein Homology CDS 90437 91363 . + 0 ID=cds-HJH9162590.1;Parent=gene-O5D79_001043;Dbxref=NCBI_GP:HJH9162590.1;Name=HJH9162590.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=O5D79_001043;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=HJH9162590.1;transl_table=11 DALFDJ020000004.1 tpg gene 91360 92637 . + . ID=gene-O5D79_001044;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=O5D79_001044 DALFDJ020000004.1 Protein Homology CDS 91360 92637 . + 0 ID=cds-HJH9162591.1;Parent=gene-O5D79_001044;Dbxref=NCBI_GP:HJH9162591.1;Name=HJH9162591.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462463.1;locus_tag=O5D79_001044;product=branched chain amino acid ABC transporter permease LivM;protein_id=HJH9162591.1;transl_table=11 DALFDJ020000004.1 tpg gene 92634 93401 . + . ID=gene-O5D79_001045;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=O5D79_001045 DALFDJ020000004.1 Protein Homology CDS 92634 93401 . + 0 ID=cds-HJH9162592.1;Parent=gene-O5D79_001045;Dbxref=NCBI_GP:HJH9162592.1;Name=HJH9162592.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=O5D79_001045;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=HJH9162592.1;transl_table=11 DALFDJ020000004.1 tpg gene 93403 94116 . + . ID=gene-O5D79_001046;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=O5D79_001046 DALFDJ020000004.1 Protein Homology CDS 93403 94116 . + 0 ID=cds-HJH9162593.1;Parent=gene-O5D79_001046;Dbxref=NCBI_GP:HJH9162593.1;Name=HJH9162593.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462461.1;locus_tag=O5D79_001046;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=HJH9162593.1;transl_table=11 DALFDJ020000004.1 tpg gene 94248 94469 . + . ID=gene-O5D79_001047;Name=O5D79_001047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001047 DALFDJ020000004.1 Protein Homology CDS 94248 94469 . + 0 ID=cds-HJH9162594.1;Parent=gene-O5D79_001047;Dbxref=NCBI_GP:HJH9162594.1;Name=HJH9162594.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229268.1;locus_tag=O5D79_001047;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=HJH9162594.1;transl_table=11 DALFDJ020000004.1 tpg gene 94466 94834 . + . ID=gene-O5D79_001048;Name=O5D79_001048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001048 DALFDJ020000004.1 Protein Homology CDS 94466 94834 . + 0 ID=cds-HJH9162595.1;Parent=gene-O5D79_001048;Dbxref=NCBI_GP:HJH9162595.1;Name=HJH9162595.1;Ontology_term=GO:0016301,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=kinase activity|0016301||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462459.1;locus_tag=O5D79_001048;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=HJH9162595.1;transl_table=11 DALFDJ020000004.1 tpg gene 95093 96409 . + . ID=gene-O5D79_001049;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=O5D79_001049 DALFDJ020000004.1 Protein Homology CDS 95093 96409 . + 0 ID=cds-HJH9162596.1;Parent=gene-O5D79_001049;Dbxref=NCBI_GP:HJH9162596.1;Name=HJH9162596.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462458.1;locus_tag=O5D79_001049;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=HJH9162596.1;transl_table=11 DALFDJ020000004.1 tpg gene 96514 97401 . + . ID=gene-O5D79_001050;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=O5D79_001050 DALFDJ020000004.1 Protein Homology CDS 96514 97401 . + 0 ID=cds-HJH9162597.1;Parent=gene-O5D79_001050;Dbxref=NCBI_GP:HJH9162597.1;Name=HJH9162597.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=O5D79_001050;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=HJH9162597.1;transl_table=11 DALFDJ020000004.1 tpg gene 97398 98243 . + . ID=gene-O5D79_001051;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=O5D79_001051 DALFDJ020000004.1 Protein Homology CDS 97398 98243 . + 0 ID=cds-HJH9162598.1;Parent=gene-O5D79_001051;Dbxref=NCBI_GP:HJH9162598.1;Name=HJH9162598.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=O5D79_001051;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=HJH9162598.1;transl_table=11 DALFDJ020000004.1 tpg gene 98245 99315 . + . ID=gene-O5D79_001052;Name=O5D79_001052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001052 DALFDJ020000004.1 Protein Homology CDS 98245 99315 . + 0 ID=cds-HJH9162599.1;Parent=gene-O5D79_001052;Dbxref=NCBI_GP:HJH9162599.1;Name=HJH9162599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462455.1;locus_tag=O5D79_001052;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=HJH9162599.1;transl_table=11 DALFDJ020000004.1 tpg gene 99312 100052 . + . ID=gene-O5D79_001053;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=O5D79_001053 DALFDJ020000004.1 Protein Homology CDS 99312 100052 . + 0 ID=cds-HJH9162600.1;Parent=gene-O5D79_001053;Dbxref=NCBI_GP:HJH9162600.1;Name=HJH9162600.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462454.1;locus_tag=O5D79_001053;product=glycerophosphodiester phosphodiesterase;protein_id=HJH9162600.1;transl_table=11 DALFDJ020000004.1 tpg gene 100065 100481 . - . ID=gene-O5D79_001054;Name=O5D79_001054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001054 DALFDJ020000004.1 Protein Homology CDS 100065 100481 . - 0 ID=cds-HJH9162601.1;Parent=gene-O5D79_001054;Dbxref=NCBI_GP:HJH9162601.1;Name=HJH9162601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462453.1;locus_tag=O5D79_001054;product=DUF2756 family protein;protein_id=HJH9162601.1;transl_table=11 DALFDJ020000004.1 tpg gene 100607 102349 . + . ID=gene-O5D79_001055;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=O5D79_001055 DALFDJ020000004.1 Protein Homology CDS 100607 102349 . + 0 ID=cds-HJH9162602.1;Parent=gene-O5D79_001055;Dbxref=NCBI_GP:HJH9162602.1;Name=HJH9162602.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462452.1;locus_tag=O5D79_001055;product=gamma-glutamyltransferase;protein_id=HJH9162602.1;transl_table=11 DALFDJ020000004.1 tpg gene 102394 103428 . - . ID=gene-O5D79_001056;Name=O5D79_001056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001056 DALFDJ020000004.1 Protein Homology CDS 102394 103428 . - 0 ID=cds-HJH9162603.1;Parent=gene-O5D79_001056;Dbxref=NCBI_GP:HJH9162603.1;Name=HJH9162603.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=O5D79_001056;product=phosphotriesterase family protein;protein_id=HJH9162603.1;transl_table=11 DALFDJ020000004.1 tpg gene 103425 104396 . - . ID=gene-O5D79_001057;Name=O5D79_001057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001057 DALFDJ020000004.1 Protein Homology CDS 103425 104396 . - 0 ID=cds-HJH9162604.1;Parent=gene-O5D79_001057;Dbxref=NCBI_GP:HJH9162604.1;Name=HJH9162604.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462450.1;locus_tag=O5D79_001057;product=DMT family transporter;protein_id=HJH9162604.1;transl_table=11 DALFDJ020000004.1 tpg gene 104450 105211 . - . ID=gene-O5D79_001058;Name=O5D79_001058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001058 DALFDJ020000004.1 Protein Homology CDS 104450 105211 . - 0 ID=cds-HJH9162605.1;Parent=gene-O5D79_001058;Dbxref=NCBI_GP:HJH9162605.1;Name=HJH9162605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462449.1;locus_tag=O5D79_001058;product=glutamine amidotransferase;protein_id=HJH9162605.1;transl_table=11 DALFDJ020000004.1 tpg gene 105227 106441 . - . ID=gene-O5D79_001059;Name=O5D79_001059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001059 DALFDJ020000004.1 Protein Homology CDS 105227 106441 . - 0 ID=cds-HJH9162606.1;Parent=gene-O5D79_001059;Dbxref=NCBI_GP:HJH9162606.1;Name=HJH9162606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=O5D79_001059;product=PfkB family carbohydrate kinase;protein_id=HJH9162606.1;transl_table=11 DALFDJ020000004.1 tpg gene 106706 107194 . - . ID=gene-O5D79_001060;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=O5D79_001060 DALFDJ020000004.1 Protein Homology CDS 106706 107194 . - 0 ID=cds-HJH9162607.1;Parent=gene-O5D79_001060;Dbxref=NCBI_GP:HJH9162607.1;Name=HJH9162607.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462447.1;locus_tag=O5D79_001060;product=N-acetyltransferase;protein_id=HJH9162607.1;transl_table=11 DALFDJ020000004.1 tpg gene 107662 108699 . + . ID=gene-O5D79_001061;Name=O5D79_001061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001061 DALFDJ020000004.1 Protein Homology CDS 107662 108699 . + 0 ID=cds-HJH9162608.1;Parent=gene-O5D79_001061;Dbxref=NCBI_GP:HJH9162608.1;Name=HJH9162608.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462446.1;locus_tag=O5D79_001061;product=oxidoreductase;protein_id=HJH9162608.1;transl_table=11 DALFDJ020000004.1 tpg gene 108823 109518 . + . ID=gene-O5D79_001062;Name=O5D79_001062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001062 DALFDJ020000004.1 Protein Homology CDS 108823 109518 . + 0 ID=cds-HJH9162609.1;Parent=gene-O5D79_001062;Dbxref=NCBI_GP:HJH9162609.1;Name=HJH9162609.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=O5D79_001062;product=pirin family protein;protein_id=HJH9162609.1;transl_table=11 DALFDJ020000004.1 tpg gene 109648 110643 . + . ID=gene-O5D79_001063;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=O5D79_001063 DALFDJ020000004.1 Protein Homology CDS 109648 110643 . + 0 ID=cds-HJH9162610.1;Parent=gene-O5D79_001063;Dbxref=NCBI_GP:HJH9162610.1;Name=HJH9162610.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=O5D79_001063;product=gluconate operon transcriptional repressor GntR;protein_id=HJH9162610.1;transl_table=11 DALFDJ020000004.1 tpg gene 110782 111315 . + . ID=gene-O5D79_001064;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=O5D79_001064 DALFDJ020000004.1 Protein Homology CDS 110782 111315 . + 0 ID=cds-HJH9162611.1;Parent=gene-O5D79_001064;Dbxref=NCBI_GP:HJH9162611.1;Name=HJH9162611.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462443.1;locus_tag=O5D79_001064;product=gluconokinase;protein_id=HJH9162611.1;transl_table=11 DALFDJ020000004.1 tpg gene 111312 112652 . + . ID=gene-O5D79_001065;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=O5D79_001065 DALFDJ020000004.1 Protein Homology CDS 111312 112652 . + 0 ID=cds-HJH9162612.1;Parent=gene-O5D79_001065;Dbxref=NCBI_GP:HJH9162612.1;Name=HJH9162612.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462442.1;locus_tag=O5D79_001065;product=gluconate transporter;protein_id=HJH9162612.1;transl_table=11 DALFDJ020000004.1 tpg pseudogene 112767 112841 . - . ID=gene-O5D79_001066;Name=O5D79_001066;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001066;pseudo=true DALFDJ020000004.1 Protein Homology CDS 112767 112841 . - 0 ID=cds-O5D79_001066;Parent=gene-O5D79_001066;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312306.1;locus_tag=O5D79_001066;product=MarC family protein;pseudo=true;transl_table=11 DALFDJ020000004.1 tpg gene 113076 114182 . + . ID=gene-O5D79_001067;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=O5D79_001067 DALFDJ020000004.1 Protein Homology CDS 113076 114182 . + 0 ID=cds-HJH9162613.1;Parent=gene-O5D79_001067;Dbxref=NCBI_GP:HJH9162613.1;Name=HJH9162613.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462440.1;locus_tag=O5D79_001067;product=aspartate-semialdehyde dehydrogenase;protein_id=HJH9162613.1;transl_table=11 DALFDJ020000004.1 tpg gene 114529 116715 . + . ID=gene-O5D79_001068;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=O5D79_001068 DALFDJ020000004.1 Protein Homology CDS 114529 116715 . + 0 ID=cds-HJH9162614.1;Parent=gene-O5D79_001068;Dbxref=NCBI_GP:HJH9162614.1;Name=HJH9162614.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462439.1;locus_tag=O5D79_001068;product=1%2C4-alpha-glucan branching enzyme;protein_id=HJH9162614.1;transl_table=11 DALFDJ020000004.1 tpg gene 116712 118688 . + . ID=gene-O5D79_001069;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=O5D79_001069 DALFDJ020000004.1 Protein Homology CDS 116712 118688 . + 0 ID=cds-HJH9162615.1;Parent=gene-O5D79_001069;Dbxref=NCBI_GP:HJH9162615.1;Name=HJH9162615.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462438.1;locus_tag=O5D79_001069;product=glycogen debranching protein GlgX;protein_id=HJH9162615.1;transl_table=11 DALFDJ020000004.1 tpg gene 118703 119998 . + . ID=gene-O5D79_001070;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=O5D79_001070 DALFDJ020000004.1 Protein Homology CDS 118703 119998 . + 0 ID=cds-HJH9162616.1;Parent=gene-O5D79_001070;Dbxref=NCBI_GP:HJH9162616.1;Name=HJH9162616.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462437.1;locus_tag=O5D79_001070;product=glucose-1-phosphate adenylyltransferase;protein_id=HJH9162616.1;transl_table=11 DALFDJ020000004.1 tpg gene 119998 121431 . + . ID=gene-O5D79_001071;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=O5D79_001071 DALFDJ020000004.1 Protein Homology CDS 119998 121431 . + 0 ID=cds-HJH9162617.1;Parent=gene-O5D79_001071;Dbxref=NCBI_GP:HJH9162617.1;Name=HJH9162617.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462436.1;locus_tag=O5D79_001071;product=glycogen synthase GlgA;protein_id=HJH9162617.1;transl_table=11 DALFDJ020000004.1 tpg gene 121451 123898 . + . ID=gene-O5D79_001072;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=O5D79_001072 DALFDJ020000004.1 Protein Homology CDS 121451 123898 . + 0 ID=cds-HJH9162618.1;Parent=gene-O5D79_001072;Dbxref=NCBI_GP:HJH9162618.1;Name=HJH9162618.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=O5D79_001072;product=glycogen phosphorylase;protein_id=HJH9162618.1;transl_table=11 DALFDJ020000004.1 tpg gene 124028 125521 . + . ID=gene-O5D79_001073;Name=O5D79_001073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001073 DALFDJ020000004.1 Protein Homology CDS 124028 125521 . + 0 ID=cds-HJH9162619.1;Parent=gene-O5D79_001073;Dbxref=NCBI_GP:HJH9162619.1;Name=HJH9162619.1;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551775.1;locus_tag=O5D79_001073;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=HJH9162619.1;transl_table=11 DALFDJ020000004.1 tpg gene 125531 126076 . + . ID=gene-O5D79_001074;Name=O5D79_001074;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001074 DALFDJ020000004.1 Protein Homology CDS 125531 126076 . + 0 ID=cds-HJH9162620.1;Parent=gene-O5D79_001074;Dbxref=NCBI_GP:HJH9162620.1;Name=HJH9162620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462429.1;locus_tag=O5D79_001074;product=hypothetical protein;protein_id=HJH9162620.1;transl_table=11 DALFDJ020000004.1 tpg gene 126123 127631 . - . ID=gene-O5D79_001075;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=O5D79_001075 DALFDJ020000004.1 Protein Homology CDS 126123 127631 . - 0 ID=cds-HJH9162621.1;Parent=gene-O5D79_001075;Dbxref=NCBI_GP:HJH9162621.1;Name=HJH9162621.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462428.1;locus_tag=O5D79_001075;product=glycerol-3-phosphate dehydrogenase;protein_id=HJH9162621.1;transl_table=11 DALFDJ020000004.1 tpg gene 127830 128156 . + . ID=gene-O5D79_001076;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=O5D79_001076 DALFDJ020000004.1 Protein Homology CDS 127830 128156 . + 0 ID=cds-HJH9162622.1;Parent=gene-O5D79_001076;Dbxref=NCBI_GP:HJH9162622.1;Name=HJH9162622.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462427.1;locus_tag=O5D79_001076;product=thiosulfate sulfurtransferase GlpE;protein_id=HJH9162622.1;transl_table=11 DALFDJ020000004.1 tpg gene 128232 129062 . + . ID=gene-O5D79_001077;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=O5D79_001077 DALFDJ020000004.1 Protein Homology CDS 128232 129062 . + 0 ID=cds-HJH9162623.1;Parent=gene-O5D79_001077;Dbxref=NCBI_GP:HJH9162623.1;Name=HJH9162623.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462426.1;locus_tag=O5D79_001077;product=rhomboid family intramembrane serine protease GlpG;protein_id=HJH9162623.1;transl_table=11 DALFDJ020000004.1 tpg gene 129156 129914 . + . ID=gene-O5D79_001078;Name=O5D79_001078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001078 DALFDJ020000004.1 Protein Homology CDS 129156 129914 . + 0 ID=cds-HJH9162624.1;Parent=gene-O5D79_001078;Dbxref=NCBI_GP:HJH9162624.1;Name=HJH9162624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=O5D79_001078;product=DeoR/GlpR family transcriptional regulator;protein_id=HJH9162624.1;transl_table=11 DALFDJ020000004.1 tpg gene 129911 131494 . - . ID=gene-O5D79_001079;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=O5D79_001079 DALFDJ020000004.1 Protein Homology CDS 129911 131494 . - 0 ID=cds-HJH9162625.1;Parent=gene-O5D79_001079;Dbxref=NCBI_GP:HJH9162625.1;Name=HJH9162625.1;Ontology_term=GO:0006355,GO:0003700,GO:0005524,GO:0008134;gbkey=CDS;gene=rtcR;go_function=DNA-binding transcription factor activity|0003700||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462424.1;locus_tag=O5D79_001079;product=RNA repair transcriptional activator RtcR;protein_id=HJH9162625.1;transl_table=11 DALFDJ020000004.1 tpg gene 131684 133237 . + . ID=gene-O5D79_001080;Name=O5D79_001080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001080 DALFDJ020000004.1 Protein Homology CDS 131684 133237 . + 0 ID=cds-HJH9162626.1;Parent=gene-O5D79_001080;Dbxref=NCBI_GP:HJH9162626.1;Name=HJH9162626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462423.1;locus_tag=O5D79_001080;product=vWA domain-containing protein;protein_id=HJH9162626.1;transl_table=11 DALFDJ020000004.1 tpg gene 133585 134799 . + . ID=gene-O5D79_001081;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=O5D79_001081 DALFDJ020000004.1 Protein Homology CDS 133585 134799 . + 0 ID=cds-HJH9162627.1;Parent=gene-O5D79_001081;Dbxref=NCBI_GP:HJH9162627.1;Name=HJH9162627.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=O5D79_001081;product=RNA-splicing ligase RtcB;protein_id=HJH9162627.1;transl_table=11 DALFDJ020000004.1 tpg gene 134803 135837 . + . ID=gene-O5D79_001082;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=protein_coding;locus_tag=O5D79_001082 DALFDJ020000004.1 Protein Homology CDS 134803 135837 . + 0 ID=cds-HJH9162628.1;Parent=gene-O5D79_001082;Dbxref=NCBI_GP:HJH9162628.1;Name=HJH9162628.1;Ontology_term=GO:0006396,GO:0003963;gbkey=CDS;gene=rtcA;go_function=RNA-3'-phosphate cyclase activity|0003963||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101029.1;locus_tag=O5D79_001082;product=RNA 3'-terminal phosphate cyclase;protein_id=HJH9162628.1;transl_table=11 DALFDJ020000004.1 tpg gene 135834 136394 . + . ID=gene-O5D79_001083;Name=O5D79_001083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001083 DALFDJ020000004.1 Protein Homology CDS 135834 136394 . + 0 ID=cds-HJH9162629.1;Parent=gene-O5D79_001083;Dbxref=NCBI_GP:HJH9162629.1;Name=HJH9162629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001650910.1;locus_tag=O5D79_001083;product=hypothetical protein;protein_id=HJH9162629.1;transl_table=11 DALFDJ020000004.1 tpg gene 136536 139241 . - . ID=gene-O5D79_001084;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=O5D79_001084 DALFDJ020000004.1 Protein Homology CDS 136536 139241 . - 0 ID=cds-HJH9162630.1;Parent=gene-O5D79_001084;Dbxref=NCBI_GP:HJH9162630.1;Name=HJH9162630.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=O5D79_001084;product=HTH-type transcriptional regulator MalT;protein_id=HJH9162630.1;transl_table=11 DALFDJ020000004.1 tpg gene 139836 142229 . + . ID=gene-O5D79_001085;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=O5D79_001085 DALFDJ020000004.1 Protein Homology CDS 139836 142229 . + 0 ID=cds-HJH9162631.1;Parent=gene-O5D79_001085;Dbxref=NCBI_GP:HJH9162631.1;Name=HJH9162631.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=O5D79_001085;product=maltodextrin phosphorylase;protein_id=HJH9162631.1;transl_table=11 DALFDJ020000004.1 tpg gene 142239 144317 . + . ID=gene-O5D79_001086;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=O5D79_001086 DALFDJ020000004.1 Protein Homology CDS 142239 144317 . + 0 ID=cds-HJH9162632.1;Parent=gene-O5D79_001086;Dbxref=NCBI_GP:HJH9162632.1;Name=HJH9162632.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462416.1;locus_tag=O5D79_001086;product=4-alpha-glucanotransferase;protein_id=HJH9162632.1;transl_table=11 DALFDJ020000004.1 tpg gene 144436 145752 . - . ID=gene-O5D79_001087;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=O5D79_001087 DALFDJ020000004.1 Protein Homology CDS 144436 145752 . - 0 ID=cds-HJH9162633.1;Parent=gene-O5D79_001087;Dbxref=NCBI_GP:HJH9162633.1;Name=HJH9162633.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462415.1;locus_tag=O5D79_001087;product=gluconate transporter;protein_id=HJH9162633.1;transl_table=11 DALFDJ020000004.1 tpg gene 146119 146694 . - . ID=gene-O5D79_001088;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=O5D79_001088 DALFDJ020000004.1 Protein Homology CDS 146119 146694 . - 0 ID=cds-HJH9162634.1;Parent=gene-O5D79_001088;Dbxref=NCBI_GP:HJH9162634.1;Name=HJH9162634.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=O5D79_001088;product=Fe-S biogenesis protein NfuA;protein_id=HJH9162634.1;transl_table=11 DALFDJ020000004.1 tpg gene 146753 147436 . - . ID=gene-O5D79_001089;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=O5D79_001089 DALFDJ020000004.1 Protein Homology CDS 146753 147436 . - 0 ID=cds-HJH9162635.1;Parent=gene-O5D79_001089;Dbxref=NCBI_GP:HJH9162635.1;Name=HJH9162635.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462413.1;locus_tag=O5D79_001089;product=DNA utilization protein GntX;protein_id=HJH9162635.1;transl_table=11 DALFDJ020000004.1 tpg gene 147474 148244 . + . ID=gene-O5D79_001090;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=O5D79_001090 DALFDJ020000004.1 Protein Homology CDS 147474 148244 . + 0 ID=cds-HJH9162636.1;Parent=gene-O5D79_001090;Dbxref=NCBI_GP:HJH9162636.1;Name=HJH9162636.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462412.1;locus_tag=O5D79_001090;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=HJH9162636.1;transl_table=11 DALFDJ020000004.1 tpg gene 148280 149194 . - . ID=gene-O5D79_001091;Name=O5D79_001091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001091 DALFDJ020000004.1 Protein Homology CDS 148280 149194 . - 0 ID=cds-HJH9162637.1;Parent=gene-O5D79_001091;Dbxref=NCBI_GP:HJH9162637.1;Name=HJH9162637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462411.1;locus_tag=O5D79_001091;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=HJH9162637.1;transl_table=11 DALFDJ020000004.1 tpg gene 149429 149665 . - . ID=gene-O5D79_001092;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=O5D79_001092 DALFDJ020000004.1 Protein Homology CDS 149429 149665 . - 0 ID=cds-HJH9162638.1;Parent=gene-O5D79_001092;Dbxref=NCBI_GP:HJH9162638.1;Name=HJH9162638.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462410.1;locus_tag=O5D79_001092;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=HJH9162638.1;transl_table=11 DALFDJ020000004.1 tpg gene 149678 151996 . - . ID=gene-O5D79_001093;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=O5D79_001093 DALFDJ020000004.1 Protein Homology CDS 149678 151996 . - 0 ID=cds-HJH9162639.1;Parent=gene-O5D79_001093;Dbxref=NCBI_GP:HJH9162639.1;Name=HJH9162639.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462409.1;locus_tag=O5D79_001093;product=Fe(2+) transporter permease subunit FeoB;protein_id=HJH9162639.1;transl_table=11 DALFDJ020000004.1 tpg gene 152015 152242 . - . ID=gene-O5D79_001094;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=O5D79_001094 DALFDJ020000004.1 Protein Homology CDS 152015 152242 . - 0 ID=cds-HJH9162640.1;Parent=gene-O5D79_001094;Dbxref=NCBI_GP:HJH9162640.1;Name=HJH9162640.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462408.1;locus_tag=O5D79_001094;product=ferrous iron transporter A;protein_id=HJH9162640.1;transl_table=11 DALFDJ020000004.1 tpg gene 152679 155009 . - . ID=gene-O5D79_001095;Name=O5D79_001095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001095 DALFDJ020000004.1 Protein Homology CDS 152679 155009 . - 0 ID=cds-HJH9162641.1;Parent=gene-O5D79_001095;Dbxref=NCBI_GP:HJH9162641.1;Name=HJH9162641.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312276.2;locus_tag=O5D79_001095;product=Tex family protein;protein_id=HJH9162641.1;transl_table=11 DALFDJ020000004.1 tpg gene 155108 155581 . - . ID=gene-O5D79_001096;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=O5D79_001096 DALFDJ020000004.1 Protein Homology CDS 155108 155581 . - 0 ID=cds-HJH9162642.1;Parent=gene-O5D79_001096;Dbxref=NCBI_GP:HJH9162642.1;Name=HJH9162642.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=O5D79_001096;product=transcription elongation factor GreB;protein_id=HJH9162642.1;transl_table=11 DALFDJ020000004.1 tpg gene 155807 156526 . + . ID=gene-O5D79_001097;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=O5D79_001097 DALFDJ020000004.1 Protein Homology CDS 155807 156526 . + 0 ID=cds-HJH9162643.1;Parent=gene-O5D79_001097;Dbxref=NCBI_GP:HJH9162643.1;Name=HJH9162643.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009204837.1;locus_tag=O5D79_001097;product=two-component system response regulator OmpR;protein_id=HJH9162643.1;transl_table=11 DALFDJ020000004.1 tpg gene 156523 157875 . + . ID=gene-O5D79_001098;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=O5D79_001098 DALFDJ020000004.1 Protein Homology CDS 156523 157875 . + 0 ID=cds-HJH9162644.1;Parent=gene-O5D79_001098;Dbxref=NCBI_GP:HJH9162644.1;Name=HJH9162644.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=O5D79_001098;product=two-component system sensor histidine kinase EnvZ;protein_id=HJH9162644.1;transl_table=11 DALFDJ020000004.1 tpg gene 157950 159569 . - . ID=gene-O5D79_001099;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=O5D79_001099 DALFDJ020000004.1 Protein Homology CDS 157950 159569 . - 0 ID=cds-HJH9162645.1;Parent=gene-O5D79_001099;Dbxref=NCBI_GP:HJH9162645.1;Name=HJH9162645.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462403.2;locus_tag=O5D79_001099;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=HJH9162645.1;transl_table=11 DALFDJ020000004.1 tpg gene 159949 161658 . + . ID=gene-O5D79_001100;Name=O5D79_001100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001100 DALFDJ020000004.1 Protein Homology CDS 159949 161658 . + 0 ID=cds-HJH9162646.1;Parent=gene-O5D79_001100;Dbxref=NCBI_GP:HJH9162646.1;Name=HJH9162646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462402.1;locus_tag=O5D79_001100;product=DUF4153 domain-containing protein;protein_id=HJH9162646.1;transl_table=11 DALFDJ020000004.1 tpg gene 161767 162645 . - . ID=gene-O5D79_001101;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=O5D79_001101 DALFDJ020000004.1 Protein Homology CDS 161767 162645 . - 0 ID=cds-HJH9162647.1;Parent=gene-O5D79_001101;Dbxref=NCBI_GP:HJH9162647.1;Name=HJH9162647.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=O5D79_001101;product=Hsp33 family molecular chaperone HslO;protein_id=HJH9162647.1;transl_table=11 DALFDJ020000004.1 tpg gene 162670 163071 . - . ID=gene-O5D79_001102;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=O5D79_001102 DALFDJ020000004.1 Protein Homology CDS 162670 163071 . - 0 ID=cds-HJH9162648.1;Parent=gene-O5D79_001102;Dbxref=NCBI_GP:HJH9162648.1;Name=HJH9162648.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462400.1;locus_tag=O5D79_001102;product=ribosome-associated heat shock protein Hsp15;protein_id=HJH9162648.1;transl_table=11 DALFDJ020000004.1 tpg gene 163082 163750 . - . ID=gene-O5D79_001103;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=O5D79_001103 DALFDJ020000004.1 Protein Homology CDS 163082 163750 . - 0 ID=cds-HJH9162649.1;Parent=gene-O5D79_001103;Dbxref=NCBI_GP:HJH9162649.1;Name=HJH9162649.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462399.1;locus_tag=O5D79_001103;product=GMP/IMP nucleotidase;protein_id=HJH9162649.1;transl_table=11 DALFDJ020000004.1 tpg gene 163815 165947 . - . ID=gene-O5D79_001104;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=O5D79_001104 DALFDJ020000004.1 Protein Homology CDS 163815 165947 . - 0 ID=cds-HJH9162650.1;Parent=gene-O5D79_001104;Dbxref=NCBI_GP:HJH9162650.1;Name=HJH9162650.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462398.1;locus_tag=O5D79_001104;product=intracellular growth attenuator protein IgaA;protein_id=HJH9162650.1;transl_table=11 DALFDJ020000004.1 tpg gene 166270 166833 . + . ID=gene-O5D79_001105;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=O5D79_001105 DALFDJ020000004.1 Protein Homology CDS 166270 166833 . + 0 ID=cds-HJH9162651.1;Parent=gene-O5D79_001105;Dbxref=NCBI_GP:HJH9162651.1;Name=HJH9162651.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045725.1;locus_tag=O5D79_001105;product=ADP compounds hydrolase NudE;protein_id=HJH9162651.1;transl_table=11 DALFDJ020000004.1 tpg gene 166929 169481 . - . ID=gene-O5D79_001106;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=O5D79_001106 DALFDJ020000004.1 Protein Homology CDS 166929 169481 . - 0 ID=cds-HJH9162652.1;Parent=gene-O5D79_001106;Dbxref=NCBI_GP:HJH9162652.1;Name=HJH9162652.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=O5D79_001106;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=HJH9162652.1;transl_table=11 DALFDJ020000004.1 tpg gene 169602 170381 . + . ID=gene-O5D79_001107;Name=O5D79_001107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001107 DALFDJ020000004.1 Protein Homology CDS 169602 170381 . + 0 ID=cds-HJH9162653.1;Parent=gene-O5D79_001107;Dbxref=NCBI_GP:HJH9162653.1;Name=HJH9162653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462395.1;locus_tag=O5D79_001107;product=DNA utilization protein HofM;protein_id=HJH9162653.1;transl_table=11 DALFDJ020000004.1 tpg gene 170381 170920 . + . ID=gene-O5D79_001108;Name=O5D79_001108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001108 DALFDJ020000004.1 Protein Homology CDS 170381 170920 . + 0 ID=cds-HJH9162654.1;Parent=gene-O5D79_001108;Dbxref=NCBI_GP:HJH9162654.1;Name=HJH9162654.1;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462394.1;locus_tag=O5D79_001108;product=PilN domain-containing protein;protein_id=HJH9162654.1;transl_table=11 DALFDJ020000004.1 tpg gene 170904 171377 . + . ID=gene-O5D79_001109;Name=O5D79_001109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001109 DALFDJ020000004.1 Protein Homology CDS 170904 171377 . + 0 ID=cds-HJH9162655.1;Parent=gene-O5D79_001109;Dbxref=NCBI_GP:HJH9162655.1;Name=HJH9162655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462393.1;locus_tag=O5D79_001109;product=hypothetical protein;protein_id=HJH9162655.1;transl_table=11 DALFDJ020000004.1 tpg gene 171367 171768 . + . ID=gene-O5D79_001110;Name=O5D79_001110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001110 DALFDJ020000004.1 Protein Homology CDS 171367 171768 . + 0 ID=cds-HJH9162656.1;Parent=gene-O5D79_001110;Dbxref=NCBI_GP:HJH9162656.1;Name=HJH9162656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462392.1;locus_tag=O5D79_001110;product=HofP DNA utilization family protein;protein_id=HJH9162656.1;transl_table=11 DALFDJ020000004.1 tpg gene 171683 172921 . + . ID=gene-O5D79_001111;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=O5D79_001111 DALFDJ020000004.1 Protein Homology CDS 171683 172921 . + 0 ID=cds-HJH9162657.1;Parent=gene-O5D79_001111;Dbxref=NCBI_GP:HJH9162657.1;Name=HJH9162657.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462391.1;locus_tag=O5D79_001111;product=DNA uptake porin HofQ;protein_id=HJH9162657.1;transl_table=11 DALFDJ020000004.1 tpg gene 173386 173907 . + . ID=gene-O5D79_001112;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=O5D79_001112 DALFDJ020000004.1 Protein Homology CDS 173386 173907 . + 0 ID=cds-HJH9162658.1;Parent=gene-O5D79_001112;Dbxref=NCBI_GP:HJH9162658.1;Name=HJH9162658.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=O5D79_001112;product=shikimate kinase AroK;protein_id=HJH9162658.1;transl_table=11 DALFDJ020000004.1 tpg gene 173964 175052 . + . ID=gene-O5D79_001113;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=O5D79_001113 DALFDJ020000004.1 Protein Homology CDS 173964 175052 . + 0 ID=cds-HJH9162659.1;Parent=gene-O5D79_001113;Dbxref=NCBI_GP:HJH9162659.1;Name=HJH9162659.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462389.1;locus_tag=O5D79_001113;product=3-dehydroquinate synthase;protein_id=HJH9162659.1;transl_table=11 DALFDJ020000004.1 tpg gene 175150 176427 . + . ID=gene-O5D79_001114;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=O5D79_001114 DALFDJ020000004.1 Protein Homology CDS 175150 176427 . + 0 ID=cds-HJH9162660.1;Parent=gene-O5D79_001114;Dbxref=NCBI_GP:HJH9162660.1;Name=HJH9162660.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462388.1;locus_tag=O5D79_001114;product=cell division protein DamX;protein_id=HJH9162660.1;transl_table=11 DALFDJ020000004.1 tpg gene 176608 177444 . + . ID=gene-O5D79_001115;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=O5D79_001115 DALFDJ020000004.1 Protein Homology CDS 176608 177444 . + 0 ID=cds-HJH9162661.1;Parent=gene-O5D79_001115;Dbxref=NCBI_GP:HJH9162661.1;Name=HJH9162661.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462387.1;locus_tag=O5D79_001115;product=adenine-specific DNA-methyltransferase;protein_id=HJH9162661.1;transl_table=11 DALFDJ020000004.1 tpg gene 177462 178139 . + . ID=gene-O5D79_001116;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=O5D79_001116 DALFDJ020000004.1 Protein Homology CDS 177462 178139 . + 0 ID=cds-HJH9162662.1;Parent=gene-O5D79_001116;Dbxref=NCBI_GP:HJH9162662.1;Name=HJH9162662.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462386.1;locus_tag=O5D79_001116;product=ribulose-phosphate 3-epimerase;protein_id=HJH9162662.1;transl_table=11 DALFDJ020000004.1 tpg gene 178132 178890 . + . ID=gene-O5D79_001117;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=O5D79_001117 DALFDJ020000004.1 Protein Homology CDS 178132 178890 . + 0 ID=cds-HJH9162663.1;Parent=gene-O5D79_001117;Dbxref=NCBI_GP:HJH9162663.1;Name=HJH9162663.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462385.1;locus_tag=O5D79_001117;product=phosphoglycolate phosphatase;protein_id=HJH9162663.1;transl_table=11 DALFDJ020000004.1 tpg gene 178883 179887 . + . ID=gene-O5D79_001118;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=O5D79_001118 DALFDJ020000004.1 Protein Homology CDS 178883 179887 . + 0 ID=cds-HJH9162664.1;Parent=gene-O5D79_001118;Dbxref=NCBI_GP:HJH9162664.1;Name=HJH9162664.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462384.1;locus_tag=O5D79_001118;product=tryptophan--tRNA ligase;protein_id=HJH9162664.1;transl_table=11 DALFDJ020000004.1 tpg gene 180032 180202 . - . ID=gene-O5D79_001119;Name=O5D79_001119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001119 DALFDJ020000004.1 Protein Homology CDS 180032 180202 . - 0 ID=cds-HJH9162665.1;Parent=gene-O5D79_001119;Dbxref=NCBI_GP:HJH9162665.1;Name=HJH9162665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462383.1;locus_tag=O5D79_001119;product=YhfL family protein;protein_id=HJH9162665.1;transl_table=11 DALFDJ020000004.1 tpg gene 180395 186280 . - . ID=gene-O5D79_001120;Name=O5D79_001120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001120 DALFDJ020000004.1 Protein Homology CDS 180395 186280 . - 0 ID=cds-HJH9162666.1;Parent=gene-O5D79_001120;Dbxref=NCBI_GP:HJH9162666.1;Name=HJH9162666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663097.1;locus_tag=O5D79_001120;product=autotransporter adhesin BigA;protein_id=HJH9162666.1;transl_table=11 DALFDJ020000004.1 tpg gene 186607 187980 . - . ID=gene-O5D79_001121;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=O5D79_001121 DALFDJ020000004.1 Protein Homology CDS 186607 187980 . - 0 ID=cds-HJH9162667.1;Parent=gene-O5D79_001121;Dbxref=NCBI_GP:HJH9162667.1;Name=HJH9162667.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=O5D79_001121;product=siroheme synthase CysG;protein_id=HJH9162667.1;transl_table=11 DALFDJ020000004.1 tpg gene 187992 188801 . - . ID=gene-O5D79_001122;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=O5D79_001122 DALFDJ020000004.1 Protein Homology CDS 187992 188801 . - 0 ID=cds-HJH9162668.1;Parent=gene-O5D79_001122;Dbxref=NCBI_GP:HJH9162668.1;Name=HJH9162668.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462379.1;locus_tag=O5D79_001122;product=nitrite transporter NirC;protein_id=HJH9162668.1;transl_table=11 DALFDJ020000004.1 tpg gene 188984 189310 . - . ID=gene-O5D79_001123;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=O5D79_001123 DALFDJ020000004.1 Protein Homology CDS 188984 189310 . - 0 ID=cds-HJH9162669.1;Parent=gene-O5D79_001123;Dbxref=NCBI_GP:HJH9162669.1;Name=HJH9162669.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571429.1;locus_tag=O5D79_001123;product=nitrite reductase small subunit NirD;protein_id=HJH9162669.1;transl_table=11 DALFDJ020000004.1 tpg gene 189307 191850 . - . ID=gene-O5D79_001124;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=O5D79_001124 DALFDJ020000004.1 Protein Homology CDS 189307 191850 . - 0 ID=cds-HJH9162670.1;Parent=gene-O5D79_001124;Dbxref=NCBI_GP:HJH9162670.1;Name=HJH9162670.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=O5D79_001124;product=NADPH-nitrite reductase large subunit;protein_id=HJH9162670.1;transl_table=11 DALFDJ020000004.1 tpg gene 192168 193349 . - . ID=gene-O5D79_001125;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=O5D79_001125 DALFDJ020000004.1 Protein Homology CDS 192168 193349 . - 0 ID=cds-HJH9162671.1;Parent=gene-O5D79_001125;Dbxref=NCBI_GP:HJH9162671.1;Name=HJH9162671.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462376.1;locus_tag=O5D79_001125;product=MFS transporter TsgA;protein_id=HJH9162671.1;transl_table=11 DALFDJ020000004.1 tpg gene 193626 194198 . + . ID=gene-O5D79_001126;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=O5D79_001126 DALFDJ020000004.1 Protein Homology CDS 193626 194198 . + 0 ID=cds-HJH9162672.1;Parent=gene-O5D79_001126;Dbxref=NCBI_GP:HJH9162672.1;Name=HJH9162672.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=O5D79_001126;product=peptidylprolyl isomerase A;protein_id=HJH9162672.1;transl_table=11 DALFDJ020000004.1 tpg gene 194307 194474 . + . ID=gene-O5D79_001127;Name=O5D79_001127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001127 DALFDJ020000004.1 Protein Homology CDS 194307 194474 . + 0 ID=cds-HJH9162673.1;Parent=gene-O5D79_001127;Dbxref=NCBI_GP:HJH9162673.1;Name=HJH9162673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462374.1;locus_tag=O5D79_001127;product=YhfG family protein;protein_id=HJH9162673.1;transl_table=11 DALFDJ020000004.1 tpg gene 194464 195066 . + . ID=gene-O5D79_001128;Name=O5D79_001128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001128 DALFDJ020000004.1 Protein Homology CDS 194464 195066 . + 0 ID=cds-HJH9162674.1;Parent=gene-O5D79_001128;Dbxref=NCBI_GP:HJH9162674.1;Name=HJH9162674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462373.1;locus_tag=O5D79_001128;product=putative adenosine monophosphate-protein transferase Fic;protein_id=HJH9162674.1;transl_table=11 DALFDJ020000004.1 tpg gene 195098 195661 . + . ID=gene-O5D79_001129;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=O5D79_001129 DALFDJ020000004.1 Protein Homology CDS 195098 195661 . + 0 ID=cds-HJH9162675.1;Parent=gene-O5D79_001129;Dbxref=NCBI_GP:HJH9162675.1;Name=HJH9162675.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462372.1;locus_tag=O5D79_001129;product=aminodeoxychorismate synthase component 2;protein_id=HJH9162675.1;transl_table=11 DALFDJ020000004.1 tpg gene 195747 196964 . + . ID=gene-O5D79_001130;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=O5D79_001130 DALFDJ020000004.1 Protein Homology CDS 195747 196964 . + 0 ID=cds-HJH9162676.1;Parent=gene-O5D79_001130;Dbxref=NCBI_GP:HJH9162676.1;Name=HJH9162676.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462371.1;locus_tag=O5D79_001130;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=HJH9162676.1;transl_table=11 DALFDJ020000004.1 tpg gene 197007 199094 . - . ID=gene-O5D79_001131;Name=O5D79_001131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001131 DALFDJ020000004.1 Protein Homology CDS 197007 199094 . - 0 ID=cds-HJH9162677.1;Parent=gene-O5D79_001131;Dbxref=NCBI_GP:HJH9162677.1;Name=HJH9162677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462370.1;locus_tag=O5D79_001131;product=YccS/YhfK family putative transporter;protein_id=HJH9162677.1;transl_table=11 DALFDJ020000004.1 tpg gene 199143 199775 . - . ID=gene-O5D79_001132;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=O5D79_001132 DALFDJ020000004.1 Protein Homology CDS 199143 199775 . - 0 ID=cds-HJH9162678.1;Parent=gene-O5D79_001132;Dbxref=NCBI_GP:HJH9162678.1;Name=HJH9162678.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=O5D79_001132;product=cAMP-activated global transcriptional regulator CRP;protein_id=HJH9162678.1;transl_table=11 DALFDJ020000004.1 tpg gene 200083 200487 . + . ID=gene-O5D79_001133;Name=O5D79_001133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001133 DALFDJ020000004.1 Protein Homology CDS 200083 200487 . + 0 ID=cds-HJH9162679.1;Parent=gene-O5D79_001133;Dbxref=NCBI_GP:HJH9162679.1;Name=HJH9162679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462368.1;locus_tag=O5D79_001133;product=OsmC family protein;protein_id=HJH9162679.1;transl_table=11 DALFDJ020000004.1 tpg gene 200583 201452 . - . ID=gene-O5D79_001134;Name=O5D79_001134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001134 DALFDJ020000004.1 Protein Homology CDS 200583 201452 . - 0 ID=cds-HJH9162680.1;Parent=gene-O5D79_001134;Dbxref=NCBI_GP:HJH9162680.1;Name=HJH9162680.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462367.1;locus_tag=O5D79_001134;product=phosphoribulokinase;protein_id=HJH9162680.1;transl_table=11 DALFDJ020000004.1 tpg gene 201504 201722 . - . ID=gene-O5D79_001135;Name=O5D79_001135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001135 DALFDJ020000004.1 Protein Homology CDS 201504 201722 . - 0 ID=cds-HJH9162681.1;Parent=gene-O5D79_001135;Dbxref=NCBI_GP:HJH9162681.1;Name=HJH9162681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=O5D79_001135;product=YheU family protein;protein_id=HJH9162681.1;transl_table=11 DALFDJ020000004.1 tpg gene 201719 202786 . - . ID=gene-O5D79_001136;Name=O5D79_001136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001136 DALFDJ020000004.1 Protein Homology CDS 201719 202786 . - 0 ID=cds-HJH9162682.1;Parent=gene-O5D79_001136;Dbxref=NCBI_GP:HJH9162682.1;Name=HJH9162682.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462365.1;locus_tag=O5D79_001136;product=hydrolase;protein_id=HJH9162682.1;transl_table=11 DALFDJ020000004.1 tpg gene 202984 203295 . + . ID=gene-O5D79_001137;Name=O5D79_001137;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001137 DALFDJ020000004.1 Protein Homology CDS 202984 203295 . + 0 ID=cds-HJH9162683.1;Parent=gene-O5D79_001137;Dbxref=NCBI_GP:HJH9162683.1;Name=HJH9162683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462364.1;locus_tag=O5D79_001137;product=monooxygenase;protein_id=HJH9162683.1;transl_table=11 DALFDJ020000004.1 tpg gene 203297 203518 . - . ID=gene-O5D79_001138;Name=O5D79_001138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001138 DALFDJ020000004.1 Protein Homology CDS 203297 203518 . - 0 ID=cds-HJH9162684.1;Parent=gene-O5D79_001138;Dbxref=NCBI_GP:HJH9162684.1;Name=HJH9162684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054026.1;locus_tag=O5D79_001138;product=LysR family transcriptional regulator;protein_id=HJH9162684.1;transl_table=11 DALFDJ020000004.1 tpg gene 203681 205588 . - . ID=gene-O5D79_001139;Name=O5D79_001139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001139 DALFDJ020000004.1 Protein Homology CDS 203681 205588 . - 0 ID=cds-HJH9162685.1;Parent=gene-O5D79_001139;Dbxref=NCBI_GP:HJH9162685.1;Name=HJH9162685.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462363.1;locus_tag=O5D79_001139;product=ABC transporter ATP-binding protein;protein_id=HJH9162685.1;transl_table=11 DALFDJ020000004.1 tpg gene 205854 206405 . + . ID=gene-O5D79_001140;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=O5D79_001140 DALFDJ020000004.1 Protein Homology CDS 205854 206405 . + 0 ID=cds-HJH9162686.1;Parent=gene-O5D79_001140;Dbxref=NCBI_GP:HJH9162686.1;Name=HJH9162686.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462362.1;locus_tag=O5D79_001140;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=HJH9162686.1;transl_table=11 DALFDJ020000004.1 tpg gene 206405 208210 . + . ID=gene-O5D79_001141;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=O5D79_001141 DALFDJ020000004.1 Protein Homology CDS 206405 208210 . + 0 ID=cds-HJH9162687.1;Parent=gene-O5D79_001141;Dbxref=NCBI_GP:HJH9162687.1;Name=HJH9162687.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462361.1;locus_tag=O5D79_001141;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=HJH9162687.1;transl_table=11 DALFDJ020000004.1 tpg gene 208221 208421 . + . ID=gene-O5D79_001142;Name=O5D79_001142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001142 DALFDJ020000004.1 Protein Homology CDS 208221 208421 . + 0 ID=cds-HJH9162688.1;Parent=gene-O5D79_001142;Dbxref=NCBI_GP:HJH9162688.1;Name=HJH9162688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462360.1;locus_tag=O5D79_001142;product=YheV family putative zinc ribbon protein;protein_id=HJH9162688.1;transl_table=11 DALFDJ020000004.1 tpg gene 208516 209106 . + . ID=gene-O5D79_001143;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=O5D79_001143 DALFDJ020000004.1 Protein Homology CDS 208516 209106 . + 0 ID=cds-HJH9162689.1;Parent=gene-O5D79_001143;Dbxref=NCBI_GP:HJH9162689.1;Name=HJH9162689.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462359.1;locus_tag=O5D79_001143;product=peptidylprolyl isomerase;protein_id=HJH9162689.1;transl_table=11 DALFDJ020000004.1 tpg gene 209294 209512 . - . ID=gene-O5D79_001144;Name=O5D79_001144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001144 DALFDJ020000004.1 Protein Homology CDS 209294 209512 . - 0 ID=cds-HJH9162690.1;Parent=gene-O5D79_001144;Dbxref=NCBI_GP:HJH9162690.1;Name=HJH9162690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=O5D79_001144;product=protein SlyX;protein_id=HJH9162690.1;transl_table=11 DALFDJ020000004.1 tpg gene 209732 210550 . + . ID=gene-O5D79_001145;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=O5D79_001145 DALFDJ020000004.1 Protein Homology CDS 209732 210550 . + 0 ID=cds-HJH9162691.1;Parent=gene-O5D79_001145;Dbxref=NCBI_GP:HJH9162691.1;Name=HJH9162691.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=O5D79_001145;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=HJH9162691.1;transl_table=11 DALFDJ020000004.1 tpg gene 210827 211549 . + . ID=gene-O5D79_001146;Name=O5D79_001146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001146 DALFDJ020000004.1 Protein Homology CDS 210827 211549 . + 0 ID=cds-HJH9162692.1;Parent=gene-O5D79_001146;Dbxref=NCBI_GP:HJH9162692.1;Name=HJH9162692.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462356.1;locus_tag=O5D79_001146;product=helix-turn-helix transcriptional regulator;protein_id=HJH9162692.1;transl_table=11 DALFDJ020000004.1 tpg gene 211549 211935 . + . ID=gene-O5D79_001147;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=O5D79_001147 DALFDJ020000004.1 Protein Homology CDS 211549 211935 . + 0 ID=cds-HJH9162693.1;Parent=gene-O5D79_001147;Dbxref=NCBI_GP:HJH9162693.1;Name=HJH9162693.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462355.1;locus_tag=O5D79_001147;product=sulfurtransferase complex subunit TusD;protein_id=HJH9162693.1;transl_table=11 DALFDJ020000004.1 tpg gene 211935 212291 . + . ID=gene-O5D79_001148;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=O5D79_001148 DALFDJ020000004.1 Protein Homology CDS 211935 212291 . + 0 ID=cds-HJH9162694.1;Parent=gene-O5D79_001148;Dbxref=NCBI_GP:HJH9162694.1;Name=HJH9162694.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462354.1;locus_tag=O5D79_001148;product=sulfurtransferase complex subunit TusC;protein_id=HJH9162694.1;transl_table=11 DALFDJ020000004.1 tpg gene 212299 212586 . + . ID=gene-O5D79_001149;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=O5D79_001149 DALFDJ020000004.1 Protein Homology CDS 212299 212586 . + 0 ID=cds-HJH9162695.1;Parent=gene-O5D79_001149;Dbxref=NCBI_GP:HJH9162695.1;Name=HJH9162695.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462353.1;locus_tag=O5D79_001149;product=sulfurtransferase complex subunit TusB;protein_id=HJH9162695.1;transl_table=11 DALFDJ020000004.1 tpg gene 212712 213086 . + . ID=gene-O5D79_001150;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=O5D79_001150 DALFDJ020000004.1 Protein Homology CDS 212712 213086 . + 0 ID=cds-HJH9162696.1;Parent=gene-O5D79_001150;Dbxref=NCBI_GP:HJH9162696.1;Name=HJH9162696.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=O5D79_001150;product=30S ribosomal protein S12;protein_id=HJH9162696.1;transl_table=11 DALFDJ020000004.1 tpg gene 213182 213652 . + . ID=gene-O5D79_001151;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=O5D79_001151 DALFDJ020000004.1 Protein Homology CDS 213182 213652 . + 0 ID=cds-HJH9162697.1;Parent=gene-O5D79_001151;Dbxref=NCBI_GP:HJH9162697.1;Name=HJH9162697.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=O5D79_001151;product=30S ribosomal protein S7;protein_id=HJH9162697.1;transl_table=11 DALFDJ020000004.1 tpg gene 213749 215863 . + . ID=gene-O5D79_001152;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=O5D79_001152 DALFDJ020000004.1 Protein Homology CDS 213749 215863 . + 0 ID=cds-HJH9162698.1;Parent=gene-O5D79_001152;Dbxref=NCBI_GP:HJH9162698.1;Name=HJH9162698.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=O5D79_001152;product=elongation factor G;protein_id=HJH9162698.1;transl_table=11 DALFDJ020000004.1 tpg gene 215935 217119 . + . ID=gene-O5D79_001153;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=O5D79_001153 DALFDJ020000004.1 Protein Homology CDS 215935 217119 . + 0 ID=cds-HJH9162699.1;Parent=gene-O5D79_001153;Dbxref=NCBI_GP:HJH9162699.1;Name=HJH9162699.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=O5D79_001153;product=elongation factor Tu;protein_id=HJH9162699.1;transl_table=11 DALFDJ020000004.1 tpg gene 217304 217498 . + . ID=gene-O5D79_001154;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=O5D79_001154 DALFDJ020000004.1 Protein Homology CDS 217304 217498 . + 0 ID=cds-HJH9162700.1;Parent=gene-O5D79_001154;Dbxref=NCBI_GP:HJH9162700.1;Name=HJH9162700.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462348.1;locus_tag=O5D79_001154;product=bacterioferritin-associated ferredoxin;protein_id=HJH9162700.1;transl_table=11 DALFDJ020000004.1 tpg gene 217571 218047 . + . ID=gene-O5D79_001155;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=O5D79_001155 DALFDJ020000004.1 Protein Homology CDS 217571 218047 . + 0 ID=cds-HJH9162701.1;Parent=gene-O5D79_001155;Dbxref=NCBI_GP:HJH9162701.1;Name=HJH9162701.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462347.1;locus_tag=O5D79_001155;product=bacterioferritin;protein_id=HJH9162701.1;transl_table=11 DALFDJ020000004.1 tpg gene 218044 218511 . - . ID=gene-O5D79_001156;Name=hopD;gbkey=Gene;gene=hopD;gene_biotype=protein_coding;locus_tag=O5D79_001156 DALFDJ020000004.1 Protein Homology CDS 218044 218511 . - 0 ID=cds-HJH9162702.1;Parent=gene-O5D79_001156;Dbxref=NCBI_GP:HJH9162702.1;Name=HJH9162702.1;gbkey=CDS;gene=hopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462346.1;locus_tag=O5D79_001156;product=leader peptidase HopD;protein_id=HJH9162702.1;transl_table=11 DALFDJ020000004.1 tpg gene 218891 219202 . + . ID=gene-O5D79_001157;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=O5D79_001157 DALFDJ020000004.1 Protein Homology CDS 218891 219202 . + 0 ID=cds-HJH9162703.1;Parent=gene-O5D79_001157;Dbxref=NCBI_GP:HJH9162703.1;Name=HJH9162703.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=O5D79_001157;product=30S ribosomal protein S10;protein_id=HJH9162703.1;transl_table=11 DALFDJ020000004.1 tpg gene 219235 219864 . + . ID=gene-O5D79_001158;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=O5D79_001158 DALFDJ020000004.1 Protein Homology CDS 219235 219864 . + 0 ID=cds-HJH9162704.1;Parent=gene-O5D79_001158;Dbxref=NCBI_GP:HJH9162704.1;Name=HJH9162704.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=O5D79_001158;product=50S ribosomal protein L3;protein_id=HJH9162704.1;transl_table=11 DALFDJ020000004.1 tpg gene 219875 220480 . + . ID=gene-O5D79_001159;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=O5D79_001159 DALFDJ020000004.1 Protein Homology CDS 219875 220480 . + 0 ID=cds-HJH9162705.1;Parent=gene-O5D79_001159;Dbxref=NCBI_GP:HJH9162705.1;Name=HJH9162705.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=O5D79_001159;product=50S ribosomal protein L4;protein_id=HJH9162705.1;transl_table=11 DALFDJ020000004.1 tpg gene 220477 220779 . + . ID=gene-O5D79_001160;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=O5D79_001160 DALFDJ020000004.1 Protein Homology CDS 220477 220779 . + 0 ID=cds-HJH9162706.1;Parent=gene-O5D79_001160;Dbxref=NCBI_GP:HJH9162706.1;Name=HJH9162706.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=O5D79_001160;product=50S ribosomal protein L23;protein_id=HJH9162706.1;transl_table=11 DALFDJ020000004.1 tpg gene 220797 221618 . + . ID=gene-O5D79_001161;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=O5D79_001161 DALFDJ020000004.1 Protein Homology CDS 220797 221618 . + 0 ID=cds-HJH9162707.1;Parent=gene-O5D79_001161;Dbxref=NCBI_GP:HJH9162707.1;Name=HJH9162707.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=O5D79_001161;product=50S ribosomal protein L2;protein_id=HJH9162707.1;transl_table=11 DALFDJ020000004.1 tpg gene 221635 221913 . + . ID=gene-O5D79_001162;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=O5D79_001162 DALFDJ020000004.1 Protein Homology CDS 221635 221913 . + 0 ID=cds-HJH9162708.1;Parent=gene-O5D79_001162;Dbxref=NCBI_GP:HJH9162708.1;Name=HJH9162708.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=O5D79_001162;product=30S ribosomal protein S19;protein_id=HJH9162708.1;transl_table=11 DALFDJ020000004.1 tpg gene 221928 222260 . + . ID=gene-O5D79_001163;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=O5D79_001163 DALFDJ020000004.1 Protein Homology CDS 221928 222260 . + 0 ID=cds-HJH9162709.1;Parent=gene-O5D79_001163;Dbxref=NCBI_GP:HJH9162709.1;Name=HJH9162709.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=O5D79_001163;product=50S ribosomal protein L22;protein_id=HJH9162709.1;transl_table=11 DALFDJ020000004.1 tpg gene 222278 222979 . + . ID=gene-O5D79_001164;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=O5D79_001164 DALFDJ020000004.1 Protein Homology CDS 222278 222979 . + 0 ID=cds-HJH9162710.1;Parent=gene-O5D79_001164;Dbxref=NCBI_GP:HJH9162710.1;Name=HJH9162710.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=O5D79_001164;product=30S ribosomal protein S3;protein_id=HJH9162710.1;transl_table=11 DALFDJ020000004.1 tpg gene 222992 223402 . + . ID=gene-O5D79_001165;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=O5D79_001165 DALFDJ020000004.1 Protein Homology CDS 222992 223402 . + 0 ID=cds-HJH9162711.1;Parent=gene-O5D79_001165;Dbxref=NCBI_GP:HJH9162711.1;Name=HJH9162711.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=O5D79_001165;product=50S ribosomal protein L16;protein_id=HJH9162711.1;transl_table=11 DALFDJ020000004.1 tpg gene 223402 223593 . + . ID=gene-O5D79_001166;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=O5D79_001166 DALFDJ020000004.1 Protein Homology CDS 223402 223593 . + 0 ID=cds-HJH9162712.1;Parent=gene-O5D79_001166;Dbxref=NCBI_GP:HJH9162712.1;Name=HJH9162712.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=O5D79_001166;product=50S ribosomal protein L29;protein_id=HJH9162712.1;transl_table=11 DALFDJ020000004.1 tpg gene 223593 223847 . + . ID=gene-O5D79_001167;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=O5D79_001167 DALFDJ020000004.1 Protein Homology CDS 223593 223847 . + 0 ID=cds-HJH9162713.1;Parent=gene-O5D79_001167;Dbxref=NCBI_GP:HJH9162713.1;Name=HJH9162713.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=O5D79_001167;product=30S ribosomal protein S17;protein_id=HJH9162713.1;transl_table=11 DALFDJ020000004.1 tpg gene 224011 224382 . + . ID=gene-O5D79_001168;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=O5D79_001168 DALFDJ020000004.1 Protein Homology CDS 224011 224382 . + 0 ID=cds-HJH9162714.1;Parent=gene-O5D79_001168;Dbxref=NCBI_GP:HJH9162714.1;Name=HJH9162714.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005501250.1;locus_tag=O5D79_001168;product=50S ribosomal protein L14;protein_id=HJH9162714.1;transl_table=11 DALFDJ020000004.1 tpg gene 224393 224707 . + . ID=gene-O5D79_001169;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=O5D79_001169 DALFDJ020000004.1 Protein Homology CDS 224393 224707 . + 0 ID=cds-HJH9162715.1;Parent=gene-O5D79_001169;Dbxref=NCBI_GP:HJH9162715.1;Name=HJH9162715.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=O5D79_001169;product=50S ribosomal protein L24;protein_id=HJH9162715.1;transl_table=11 DALFDJ020000004.1 tpg gene 224722 225261 . + . ID=gene-O5D79_001170;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=O5D79_001170 DALFDJ020000004.1 Protein Homology CDS 224722 225261 . + 0 ID=cds-HJH9162716.1;Parent=gene-O5D79_001170;Dbxref=NCBI_GP:HJH9162716.1;Name=HJH9162716.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=O5D79_001170;product=50S ribosomal protein L5;protein_id=HJH9162716.1;transl_table=11 DALFDJ020000004.1 tpg gene 225276 225581 . + . ID=gene-O5D79_001171;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=O5D79_001171 DALFDJ020000004.1 Protein Homology CDS 225276 225581 . + 0 ID=cds-HJH9162717.1;Parent=gene-O5D79_001171;Dbxref=NCBI_GP:HJH9162717.1;Name=HJH9162717.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462331.3;locus_tag=O5D79_001171;product=30S ribosomal protein S14;protein_id=HJH9162717.1;transl_table=11 DALFDJ020000004.1 tpg gene 225615 226007 . + . ID=gene-O5D79_001172;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=O5D79_001172 DALFDJ020000004.1 Protein Homology CDS 225615 226007 . + 0 ID=cds-HJH9162718.1;Parent=gene-O5D79_001172;Dbxref=NCBI_GP:HJH9162718.1;Name=HJH9162718.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=O5D79_001172;product=30S ribosomal protein S8;protein_id=HJH9162718.1;transl_table=11 DALFDJ020000004.1 tpg gene 226020 226553 . + . ID=gene-O5D79_001173;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=O5D79_001173 DALFDJ020000004.1 Protein Homology CDS 226020 226553 . + 0 ID=cds-HJH9162719.1;Parent=gene-O5D79_001173;Dbxref=NCBI_GP:HJH9162719.1;Name=HJH9162719.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=O5D79_001173;product=50S ribosomal protein L6;protein_id=HJH9162719.1;transl_table=11 DALFDJ020000004.1 tpg gene 226563 226916 . + . ID=gene-O5D79_001174;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=O5D79_001174 DALFDJ020000004.1 Protein Homology CDS 226563 226916 . + 0 ID=cds-HJH9162720.1;Parent=gene-O5D79_001174;Dbxref=NCBI_GP:HJH9162720.1;Name=HJH9162720.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=O5D79_001174;product=50S ribosomal protein L18;protein_id=HJH9162720.1;transl_table=11 DALFDJ020000004.1 tpg gene 226931 227434 . + . ID=gene-O5D79_001175;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=O5D79_001175 DALFDJ020000004.1 Protein Homology CDS 226931 227434 . + 0 ID=cds-HJH9162721.1;Parent=gene-O5D79_001175;Dbxref=NCBI_GP:HJH9162721.1;Name=HJH9162721.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=O5D79_001175;product=30S ribosomal protein S5;protein_id=HJH9162721.1;transl_table=11 DALFDJ020000004.1 tpg gene 227438 227617 . + . ID=gene-O5D79_001176;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=O5D79_001176 DALFDJ020000004.1 Protein Homology CDS 227438 227617 . + 0 ID=cds-HJH9162722.1;Parent=gene-O5D79_001176;Dbxref=NCBI_GP:HJH9162722.1;Name=HJH9162722.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=O5D79_001176;product=50S ribosomal protein L30;protein_id=HJH9162722.1;transl_table=11 DALFDJ020000004.1 tpg gene 227621 228055 . + . ID=gene-O5D79_001177;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=O5D79_001177 DALFDJ020000004.1 Protein Homology CDS 227621 228055 . + 0 ID=cds-HJH9162723.1;Parent=gene-O5D79_001177;Dbxref=NCBI_GP:HJH9162723.1;Name=HJH9162723.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=O5D79_001177;product=50S ribosomal protein L15;protein_id=HJH9162723.1;transl_table=11 DALFDJ020000004.1 tpg gene 228063 229394 . + . ID=gene-O5D79_001178;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=O5D79_001178 DALFDJ020000004.1 Protein Homology CDS 228063 229394 . + 0 ID=cds-HJH9162724.1;Parent=gene-O5D79_001178;Dbxref=NCBI_GP:HJH9162724.1;Name=HJH9162724.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=O5D79_001178;product=preprotein translocase subunit SecY;protein_id=HJH9162724.1;transl_table=11 DALFDJ020000004.1 tpg gene 229426 229542 . + . ID=gene-O5D79_001179;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=O5D79_001179 DALFDJ020000004.1 Protein Homology CDS 229426 229542 . + 0 ID=cds-HJH9162725.1;Parent=gene-O5D79_001179;Dbxref=NCBI_GP:HJH9162725.1;Name=HJH9162725.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=O5D79_001179;product=50S ribosomal protein L36;protein_id=HJH9162725.1;transl_table=11 DALFDJ020000004.1 tpg gene 229689 230045 . + . ID=gene-O5D79_001180;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=O5D79_001180 DALFDJ020000004.1 Protein Homology CDS 229689 230045 . + 0 ID=cds-HJH9162726.1;Parent=gene-O5D79_001180;Dbxref=NCBI_GP:HJH9162726.1;Name=HJH9162726.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=O5D79_001180;product=30S ribosomal protein S13;protein_id=HJH9162726.1;transl_table=11 DALFDJ020000004.1 tpg gene 230062 230451 . + . ID=gene-O5D79_001181;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=O5D79_001181 DALFDJ020000004.1 Protein Homology CDS 230062 230451 . + 0 ID=cds-HJH9162727.1;Parent=gene-O5D79_001181;Dbxref=NCBI_GP:HJH9162727.1;Name=HJH9162727.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=O5D79_001181;product=30S ribosomal protein S11;protein_id=HJH9162727.1;transl_table=11 DALFDJ020000004.1 tpg gene 230485 231105 . + . ID=gene-O5D79_001182;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=O5D79_001182 DALFDJ020000004.1 Protein Homology CDS 230485 231105 . + 0 ID=cds-HJH9162728.1;Parent=gene-O5D79_001182;Dbxref=NCBI_GP:HJH9162728.1;Name=HJH9162728.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=O5D79_001182;product=30S ribosomal protein S4;protein_id=HJH9162728.1;transl_table=11 DALFDJ020000004.1 tpg gene 231131 232120 . + . ID=gene-O5D79_001183;Name=O5D79_001183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001183 DALFDJ020000004.1 Protein Homology CDS 231131 232120 . + 0 ID=cds-HJH9162729.1;Parent=gene-O5D79_001183;Dbxref=NCBI_GP:HJH9162729.1;Name=HJH9162729.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=O5D79_001183;product=DNA-directed RNA polymerase subunit alpha;protein_id=HJH9162729.1;transl_table=11 DALFDJ020000004.1 tpg gene 232161 232544 . + . ID=gene-O5D79_001184;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=O5D79_001184 DALFDJ020000004.1 Protein Homology CDS 232161 232544 . + 0 ID=cds-HJH9162730.1;Parent=gene-O5D79_001184;Dbxref=NCBI_GP:HJH9162730.1;Name=HJH9162730.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462318.1;locus_tag=O5D79_001184;product=50S ribosomal protein L17;protein_id=HJH9162730.1;transl_table=11 DALFDJ020000004.1 tpg gene 232652 233020 . + . ID=gene-O5D79_001185;Name=O5D79_001185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001185 DALFDJ020000004.1 Protein Homology CDS 232652 233020 . + 0 ID=cds-HJH9162731.1;Parent=gene-O5D79_001185;Dbxref=NCBI_GP:HJH9162731.1;Name=HJH9162731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462317.1;locus_tag=O5D79_001185;product=DUF1992 domain-containing protein;protein_id=HJH9162731.1;transl_table=11 DALFDJ020000004.1 tpg gene 233031 233456 . + . ID=gene-O5D79_001186;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=O5D79_001186 DALFDJ020000004.1 Protein Homology CDS 233031 233456 . + 0 ID=cds-HJH9162732.1;Parent=gene-O5D79_001186;Dbxref=NCBI_GP:HJH9162732.1;Name=HJH9162732.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=O5D79_001186;product=Zn(2+)-responsive transcriptional regulator;protein_id=HJH9162732.1;transl_table=11 DALFDJ020000004.1 tpg pseudogene 233514 233717 . + . ID=gene-O5D79_001187;Name=O5D79_001187;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001187;pseudo=true DALFDJ020000004.1 Protein Homology CDS 233514 233717 . + 0 ID=cds-O5D79_001187;Parent=gene-O5D79_001187;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=O5D79_001187;product=alternative ribosome-rescue factor A;pseudo=true;transl_table=11 DALFDJ020000004.1 tpg gene 233719 234132 . - . ID=gene-O5D79_001188;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=O5D79_001188 DALFDJ020000004.1 Protein Homology CDS 233719 234132 . - 0 ID=cds-HJH9162733.1;Parent=gene-O5D79_001188;Dbxref=NCBI_GP:HJH9162733.1;Name=HJH9162733.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462314.1;locus_tag=O5D79_001188;product=large-conductance mechanosensitive channel protein MscL;protein_id=HJH9162733.1;transl_table=11 DALFDJ020000004.1 tpg gene 234274 235650 . - . ID=gene-O5D79_001189;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=O5D79_001189 DALFDJ020000004.1 Protein Homology CDS 234274 235650 . - 0 ID=cds-HJH9162734.1;Parent=gene-O5D79_001189;Dbxref=NCBI_GP:HJH9162734.1;Name=HJH9162734.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=O5D79_001189;product=Trk system potassium transporter TrkA;protein_id=HJH9162734.1;transl_table=11 DALFDJ020000004.1 tpg gene 235672 236961 . - . ID=gene-O5D79_001190;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=O5D79_001190 DALFDJ020000004.1 Protein Homology CDS 235672 236961 . - 0 ID=cds-HJH9162735.1;Parent=gene-O5D79_001190;Dbxref=NCBI_GP:HJH9162735.1;Name=HJH9162735.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462312.1;locus_tag=O5D79_001190;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=HJH9162735.1;transl_table=11 DALFDJ020000004.1 tpg gene 237013 237960 . - . ID=gene-O5D79_001191;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=O5D79_001191 DALFDJ020000004.1 Protein Homology CDS 237013 237960 . - 0 ID=cds-HJH9162736.1;Parent=gene-O5D79_001191;Dbxref=NCBI_GP:HJH9162736.1;Name=HJH9162736.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462311.1;locus_tag=O5D79_001191;product=methionyl-tRNA formyltransferase;protein_id=HJH9162736.1;transl_table=11 DALFDJ020000004.1 tpg gene 237976 238485 . - . ID=gene-O5D79_001192;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=O5D79_001192 DALFDJ020000004.1 Protein Homology CDS 237976 238485 . - 0 ID=cds-HJH9162737.1;Parent=gene-O5D79_001192;Dbxref=NCBI_GP:HJH9162737.1;Name=HJH9162737.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=O5D79_001192;product=peptide deformylase;protein_id=HJH9162737.1;transl_table=11 DALFDJ020000004.1 tpg gene 238617 239741 . + . ID=gene-O5D79_001193;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=O5D79_001193 DALFDJ020000004.1 Protein Homology CDS 238617 239741 . + 0 ID=cds-HJH9162738.1;Parent=gene-O5D79_001193;Dbxref=NCBI_GP:HJH9162738.1;Name=HJH9162738.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462309.1;locus_tag=O5D79_001193;product=DNA-protecting protein DprA;protein_id=HJH9162738.1;transl_table=11 DALFDJ020000004.1 tpg gene 239713 240186 . + . ID=gene-O5D79_001194;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=O5D79_001194 DALFDJ020000004.1 Protein Homology CDS 239713 240186 . + 0 ID=cds-HJH9162739.1;Parent=gene-O5D79_001194;Dbxref=NCBI_GP:HJH9162739.1;Name=HJH9162739.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=O5D79_001194;product=DUF494 family protein Smg;protein_id=HJH9162739.1;transl_table=11 DALFDJ020000004.1 tpg gene 240213 240755 . + . ID=gene-O5D79_001195;Name=O5D79_001195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001195 DALFDJ020000004.1 Protein Homology CDS 240213 240755 . + 0 ID=cds-HJH9162740.1;Parent=gene-O5D79_001195;Dbxref=NCBI_GP:HJH9162740.1;Name=HJH9162740.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462307.1;locus_tag=O5D79_001195;product=topoisomerase DNA-binding C4 zinc finger domain-containing protein;protein_id=HJH9162740.1;transl_table=11 DALFDJ020000004.1 tpg gene 240760 241332 . + . ID=gene-O5D79_001196;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=O5D79_001196 DALFDJ020000004.1 Protein Homology CDS 240760 241332 . + 0 ID=cds-HJH9162741.1;Parent=gene-O5D79_001196;Dbxref=NCBI_GP:HJH9162741.1;Name=HJH9162741.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462306.1;locus_tag=O5D79_001196;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=HJH9162741.1;transl_table=11 DALFDJ020000004.1 tpg gene 241337 242155 . + . ID=gene-O5D79_001197;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=O5D79_001197 DALFDJ020000004.1 Protein Homology CDS 241337 242155 . + 0 ID=cds-HJH9162742.1;Parent=gene-O5D79_001197;Dbxref=NCBI_GP:HJH9162742.1;Name=HJH9162742.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462305.1;locus_tag=O5D79_001197;product=shikimate dehydrogenase;protein_id=HJH9162742.1;transl_table=11 DALFDJ020000004.1 tpg gene 242152 242409 . + . ID=gene-O5D79_001198;Name=O5D79_001198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001198 DALFDJ020000004.1 Protein Homology CDS 242152 242409 . + 0 ID=cds-HJH9162743.1;Parent=gene-O5D79_001198;Dbxref=NCBI_GP:HJH9162743.1;Name=HJH9162743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462304.1;locus_tag=O5D79_001198;product=DUF1488 domain-containing protein;protein_id=HJH9162743.1;transl_table=11 DALFDJ020000004.1 tpg gene 242385 242939 . - . ID=gene-O5D79_001199;Name=O5D79_001199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001199 DALFDJ020000004.1 Protein Homology CDS 242385 242939 . - 0 ID=cds-HJH9162744.1;Parent=gene-O5D79_001199;Dbxref=NCBI_GP:HJH9162744.1;Name=HJH9162744.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462303.1;locus_tag=O5D79_001199;product=gamma carbonic anhydrase family protein;protein_id=HJH9162744.1;transl_table=11 DALFDJ020000004.1 tpg gene 243053 243205 . + . ID=gene-O5D79_001200;Name=O5D79_001200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001200 DALFDJ020000004.1 GeneMarkS-2+ CDS 243053 243205 . + 0 ID=cds-HJH9162745.1;Parent=gene-O5D79_001200;Dbxref=NCBI_GP:HJH9162745.1;Name=HJH9162745.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_001200;product=hypothetical protein;protein_id=HJH9162745.1;transl_table=11 DALFDJ020000004.1 tpg gene 243413 243661 . + . ID=gene-O5D79_001201;Name=O5D79_001201;end_range=243661,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=O5D79_001201;partial=true DALFDJ020000004.1 cmsearch rRNA 243413 243661 . + . ID=rna-O5D79_001201;Parent=gene-O5D79_001201;Dbxref=RFAM:RF00177;end_range=243661,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_001201;partial=true;product=16S ribosomal RNA DALFDJ020000004.1 cmsearch exon 243413 243661 . + . ID=exon-O5D79_001201-1;Parent=rna-O5D79_001201;Dbxref=RFAM:RF00177;end_range=243661,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_001201;partial=true;product=16S ribosomal RNA ##sequence-region DALFDJ020000005.1 1 234371 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000005.1 tpg region 1 234371 . + . ID=DALFDJ020000005.1:1..234371;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000005.1 tpg gene 38 168 . + . ID=gene-O5D79_001202;Name=O5D79_001202;gbkey=Gene;gene_biotype=ncRNA;locus_tag=O5D79_001202 DALFDJ020000005.1 cmsearch ncRNA 38 168 . + . ID=rna-O5D79_001202;Parent=gene-O5D79_001202;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_001202;product=RtT sRNA DALFDJ020000005.1 cmsearch exon 38 168 . + . ID=exon-O5D79_001202-1;Parent=rna-O5D79_001202;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_001202;product=RtT sRNA DALFDJ020000005.1 tpg gene 213 344 . + . ID=gene-O5D79_001203;Name=O5D79_001203;gbkey=Gene;gene_biotype=ncRNA;locus_tag=O5D79_001203 DALFDJ020000005.1 cmsearch ncRNA 213 344 . + . ID=rna-O5D79_001203;Parent=gene-O5D79_001203;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_001203;product=RtT sRNA DALFDJ020000005.1 cmsearch exon 213 344 . + . ID=exon-O5D79_001203-1;Parent=rna-O5D79_001203;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_001203;product=RtT sRNA DALFDJ020000005.1 tpg gene 447 1976 . - . ID=gene-O5D79_001204;Name=O5D79_001204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001204 DALFDJ020000005.1 Protein Homology CDS 447 1976 . - 0 ID=cds-HJH9162746.1;Parent=gene-O5D79_001204;Dbxref=NCBI_GP:HJH9162746.1;Name=HJH9162746.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460716.1;locus_tag=O5D79_001204;product=tetratricopeptide repeat protein;protein_id=HJH9162746.1;transl_table=11 DALFDJ020000005.1 tpg gene 2218 2895 . - . ID=gene-O5D79_001205;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=O5D79_001205 DALFDJ020000005.1 Protein Homology CDS 2218 2895 . - 0 ID=cds-HJH9162747.1;Parent=gene-O5D79_001205;Dbxref=NCBI_GP:HJH9162747.1;Name=HJH9162747.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460717.1;locus_tag=O5D79_001205;product=respiratory nitrate reductase subunit gamma;protein_id=HJH9162747.1;transl_table=11 DALFDJ020000005.1 tpg gene 2895 3605 . - . ID=gene-O5D79_001206;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=O5D79_001206 DALFDJ020000005.1 Protein Homology CDS 2895 3605 . - 0 ID=cds-HJH9162748.1;Parent=gene-O5D79_001206;Dbxref=NCBI_GP:HJH9162748.1;Name=HJH9162748.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=O5D79_001206;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=HJH9162748.1;transl_table=11 DALFDJ020000005.1 tpg gene 3602 5137 . - . ID=gene-O5D79_001207;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=O5D79_001207 DALFDJ020000005.1 Protein Homology CDS 3602 5137 . - 0 ID=cds-HJH9162749.1;Parent=gene-O5D79_001207;Dbxref=NCBI_GP:HJH9162749.1;Name=HJH9162749.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460719.1;locus_tag=O5D79_001207;product=nitrate reductase subunit beta;protein_id=HJH9162749.1;transl_table=11 DALFDJ020000005.1 tpg gene 5134 8877 . - . ID=gene-O5D79_001208;Name=O5D79_001208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001208 DALFDJ020000005.1 Protein Homology CDS 5134 8877 . - 0 ID=cds-HJH9162750.1;Parent=gene-O5D79_001208;Dbxref=NCBI_GP:HJH9162750.1;Name=HJH9162750.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=O5D79_001208;product=nitrate reductase subunit alpha;protein_id=HJH9162750.1;transl_table=11 DALFDJ020000005.1 tpg gene 9265 10662 . - . ID=gene-O5D79_001209;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=O5D79_001209 DALFDJ020000005.1 Protein Homology CDS 9265 10662 . - 0 ID=cds-HJH9162751.1;Parent=gene-O5D79_001209;Dbxref=NCBI_GP:HJH9162751.1;Name=HJH9162751.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460721.1;locus_tag=O5D79_001209;product=nitrate transporter NarK;protein_id=HJH9162751.1;transl_table=11 DALFDJ020000005.1 tpg gene 11003 12799 . + . ID=gene-O5D79_001210;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=O5D79_001210 DALFDJ020000005.1 Protein Homology CDS 11003 12799 . + 0 ID=cds-HJH9162752.1;Parent=gene-O5D79_001210;Dbxref=NCBI_GP:HJH9162752.1;Name=HJH9162752.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=O5D79_001210;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=HJH9162752.1;transl_table=11 DALFDJ020000005.1 tpg gene 12792 13442 . + . ID=gene-O5D79_001211;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=O5D79_001211 DALFDJ020000005.1 Protein Homology CDS 12792 13442 . + 0 ID=cds-HJH9162753.1;Parent=gene-O5D79_001211;Dbxref=NCBI_GP:HJH9162753.1;Name=HJH9162753.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460723.1;locus_tag=O5D79_001211;product=two-component system response regulator NarL;protein_id=HJH9162753.1;transl_table=11 DALFDJ020000005.1 tpg gene 13443 14867 . - . ID=gene-O5D79_001212;Name=O5D79_001212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001212 DALFDJ020000005.1 Protein Homology CDS 13443 14867 . - 0 ID=cds-HJH9162754.1;Parent=gene-O5D79_001212;Dbxref=NCBI_GP:HJH9162754.1;Name=HJH9162754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460724.3;locus_tag=O5D79_001212;product=YchO/YchP family invasin;protein_id=HJH9162754.1;transl_table=11 DALFDJ020000005.1 tpg gene 15044 15397 . + . ID=gene-O5D79_001213;Name=O5D79_001213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001213 DALFDJ020000005.1 Protein Homology CDS 15044 15397 . + 0 ID=cds-HJH9162755.1;Parent=gene-O5D79_001213;Dbxref=NCBI_GP:HJH9162755.1;Name=HJH9162755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460725.1;locus_tag=O5D79_001213;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=HJH9162755.1;transl_table=11 DALFDJ020000005.1 tpg gene 15477 15707 . - . ID=gene-O5D79_001214;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=O5D79_001214 DALFDJ020000005.1 Protein Homology CDS 15477 15707 . - 0 ID=cds-HJH9162756.1;Parent=gene-O5D79_001214;Dbxref=NCBI_GP:HJH9162756.1;Name=HJH9162756.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=O5D79_001214;product=putative cation transport regulator ChaB;protein_id=HJH9162756.1;transl_table=11 DALFDJ020000005.1 tpg gene 15974 17074 . + . ID=gene-O5D79_001215;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=O5D79_001215 DALFDJ020000005.1 Protein Homology CDS 15974 17074 . + 0 ID=cds-HJH9162757.1;Parent=gene-O5D79_001215;Dbxref=NCBI_GP:HJH9162757.1;Name=HJH9162757.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460727.1;locus_tag=O5D79_001215;product=sodium-potassium/proton antiporter ChaA;protein_id=HJH9162757.1;transl_table=11 DALFDJ020000005.1 tpg gene 17128 17982 . - . ID=gene-O5D79_001216;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=O5D79_001216 DALFDJ020000005.1 Protein Homology CDS 17128 17982 . - 0 ID=cds-HJH9162758.1;Parent=gene-O5D79_001216;Dbxref=NCBI_GP:HJH9162758.1;Name=HJH9162758.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460728.1;locus_tag=O5D79_001216;product=3-deoxy-8-phosphooctulonate synthase;protein_id=HJH9162758.1;transl_table=11 DALFDJ020000005.1 tpg gene 18020 18829 . - . ID=gene-O5D79_001217;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=O5D79_001217 DALFDJ020000005.1 Protein Homology CDS 18020 18829 . - 0 ID=cds-HJH9162759.1;Parent=gene-O5D79_001217;Dbxref=NCBI_GP:HJH9162759.1;Name=HJH9162759.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460729.1;locus_tag=O5D79_001217;product=invasion regulator SirB1;protein_id=HJH9162759.1;transl_table=11 DALFDJ020000005.1 tpg gene 18833 19222 . - . ID=gene-O5D79_001218;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=O5D79_001218 DALFDJ020000005.1 Protein Homology CDS 18833 19222 . - 0 ID=cds-HJH9162760.1;Parent=gene-O5D79_001218;Dbxref=NCBI_GP:HJH9162760.1;Name=HJH9162760.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460730.1;locus_tag=O5D79_001218;product=invasion regulator SirB2;protein_id=HJH9162760.1;transl_table=11 DALFDJ020000005.1 tpg gene 19219 20052 . - . ID=gene-O5D79_001219;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=O5D79_001219 DALFDJ020000005.1 Protein Homology CDS 19219 20052 . - 0 ID=cds-HJH9162761.1;Parent=gene-O5D79_001219;Dbxref=NCBI_GP:HJH9162761.1;Name=HJH9162761.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460731.1;locus_tag=O5D79_001219;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=HJH9162761.1;transl_table=11 DALFDJ020000005.1 tpg gene 20052 21134 . - . ID=gene-O5D79_001220;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=O5D79_001220 DALFDJ020000005.1 Protein Homology CDS 20052 21134 . - 0 ID=cds-HJH9162762.1;Parent=gene-O5D79_001220;Dbxref=NCBI_GP:HJH9162762.1;Name=HJH9162762.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=O5D79_001220;product=peptide chain release factor 1;protein_id=HJH9162762.1;transl_table=11 DALFDJ020000005.1 tpg gene 21175 22431 . - . ID=gene-O5D79_001221;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=O5D79_001221 DALFDJ020000005.1 Protein Homology CDS 21175 22431 . - 0 ID=cds-HJH9162763.1;Parent=gene-O5D79_001221;Dbxref=NCBI_GP:HJH9162763.1;Name=HJH9162763.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=O5D79_001221;product=glutamyl-tRNA reductase;protein_id=HJH9162763.1;transl_table=11 DALFDJ020000005.1 tpg gene 22745 23368 . + . ID=gene-O5D79_001222;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=O5D79_001222 DALFDJ020000005.1 Protein Homology CDS 22745 23368 . + 0 ID=cds-HJH9162764.1;Parent=gene-O5D79_001222;Dbxref=NCBI_GP:HJH9162764.1;Name=HJH9162764.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460734.1;locus_tag=O5D79_001222;product=lipoprotein insertase outer membrane protein LolB;protein_id=HJH9162764.1;transl_table=11 DALFDJ020000005.1 tpg gene 23365 24216 . + . ID=gene-O5D79_001223;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=O5D79_001223 DALFDJ020000005.1 Protein Homology CDS 23365 24216 . + 0 ID=cds-HJH9162765.1;Parent=gene-O5D79_001223;Dbxref=NCBI_GP:HJH9162765.1;Name=HJH9162765.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460735.1;locus_tag=O5D79_001223;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=HJH9162765.1;transl_table=11 DALFDJ020000005.1 tpg gene 24482 25429 . + . ID=gene-O5D79_001224;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=O5D79_001224 DALFDJ020000005.1 Protein Homology CDS 24482 25429 . + 0 ID=cds-HJH9162766.1;Parent=gene-O5D79_001224;Dbxref=NCBI_GP:HJH9162766.1;Name=HJH9162766.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=O5D79_001224;product=ribose-phosphate diphosphokinase;protein_id=HJH9162766.1;transl_table=11 DALFDJ020000005.1 tpg gene 25554 27239 . + . ID=gene-O5D79_001225;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=O5D79_001225 DALFDJ020000005.1 Protein Homology CDS 25554 27239 . + 0 ID=cds-HJH9162767.1;Parent=gene-O5D79_001225;Dbxref=NCBI_GP:HJH9162767.1;Name=HJH9162767.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525165.1;locus_tag=O5D79_001225;product=C4-dicarboxylic acid transporter DauA;protein_id=HJH9162767.1;transl_table=11 DALFDJ020000005.1 tpg gene 27284 27562 . - . ID=gene-O5D79_001226;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=O5D79_001226 DALFDJ020000005.1 Protein Homology CDS 27284 27562 . - 0 ID=cds-HJH9162768.1;Parent=gene-O5D79_001226;Dbxref=NCBI_GP:HJH9162768.1;Name=HJH9162768.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460738.1;locus_tag=O5D79_001226;product=stress-induced protein YchH;protein_id=HJH9162768.1;transl_table=11 DALFDJ020000005.1 tpg gene 27838 28422 . + . ID=gene-O5D79_001227;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=O5D79_001227 DALFDJ020000005.1 Protein Homology CDS 27838 28422 . + 0 ID=cds-HJH9162769.1;Parent=gene-O5D79_001227;Dbxref=NCBI_GP:HJH9162769.1;Name=HJH9162769.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=O5D79_001227;product=aminoacyl-tRNA hydrolase;protein_id=HJH9162769.1;transl_table=11 DALFDJ020000005.1 tpg gene 28539 29630 . + . ID=gene-O5D79_001228;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=O5D79_001228 DALFDJ020000005.1 Protein Homology CDS 28539 29630 . + 0 ID=cds-HJH9162770.1;Parent=gene-O5D79_001228;Dbxref=NCBI_GP:HJH9162770.1;Name=HJH9162770.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=O5D79_001228;product=redox-regulated ATPase YchF;protein_id=HJH9162770.1;transl_table=11 DALFDJ020000005.1 tpg gene 30389 31009 . + . ID=gene-O5D79_001229;Name=O5D79_001229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001229 DALFDJ020000005.1 Protein Homology CDS 30389 31009 . + 0 ID=cds-HJH9162771.1;Parent=gene-O5D79_001229;Dbxref=NCBI_GP:HJH9162771.1;Name=HJH9162771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376822.1;locus_tag=O5D79_001229;product=hypothetical protein;protein_id=HJH9162771.1;transl_table=11 DALFDJ020000005.1 tpg gene 31048 31503 . + . ID=gene-O5D79_001230;Name=O5D79_001230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001230 DALFDJ020000005.1 Protein Homology CDS 31048 31503 . + 0 ID=cds-HJH9162772.1;Parent=gene-O5D79_001230;Dbxref=NCBI_GP:HJH9162772.1;Name=HJH9162772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487332.1;locus_tag=O5D79_001230;product=hypothetical protein;protein_id=HJH9162772.1;transl_table=11 DALFDJ020000005.1 tpg gene 31979 33244 . - . ID=gene-O5D79_001231;Name=O5D79_001231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001231 DALFDJ020000005.1 Protein Homology CDS 31979 33244 . - 0 ID=cds-HJH9162773.1;Parent=gene-O5D79_001231;Dbxref=NCBI_GP:HJH9162773.1;Name=HJH9162773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460741.1;locus_tag=O5D79_001231;product=DUF4427 domain-containing protein;protein_id=HJH9162773.1;transl_table=11 DALFDJ020000005.1 tpg gene 33739 34857 . + . ID=gene-O5D79_001232;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=O5D79_001232 DALFDJ020000005.1 Protein Homology CDS 33739 34857 . + 0 ID=cds-HJH9162774.1;Parent=gene-O5D79_001232;Dbxref=NCBI_GP:HJH9162774.1;Name=HJH9162774.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460742.1;locus_tag=O5D79_001232;product=hydrogenase 1 small subunit;protein_id=HJH9162774.1;transl_table=11 DALFDJ020000005.1 tpg gene 34854 36647 . + . ID=gene-O5D79_001233;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=O5D79_001233 DALFDJ020000005.1 Protein Homology CDS 34854 36647 . + 0 ID=cds-HJH9162775.1;Parent=gene-O5D79_001233;Dbxref=NCBI_GP:HJH9162775.1;Name=HJH9162775.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460743.1;locus_tag=O5D79_001233;product=Ni/Fe-hydrogenase large subunit;protein_id=HJH9162775.1;transl_table=11 DALFDJ020000005.1 tpg gene 36666 37397 . + . ID=gene-O5D79_001234;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=O5D79_001234 DALFDJ020000005.1 Protein Homology CDS 36666 37397 . + 0 ID=cds-HJH9162776.1;Parent=gene-O5D79_001234;Dbxref=NCBI_GP:HJH9162776.1;Name=HJH9162776.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460744.1;locus_tag=O5D79_001234;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=HJH9162776.1;transl_table=11 DALFDJ020000005.1 tpg gene 37394 37990 . + . ID=gene-O5D79_001235;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=O5D79_001235 DALFDJ020000005.1 Protein Homology CDS 37394 37990 . + 0 ID=cds-HJH9162777.1;Parent=gene-O5D79_001235;Dbxref=NCBI_GP:HJH9162777.1;Name=HJH9162777.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460745.1;locus_tag=O5D79_001235;product=hydrogenase 1 maturation protease;protein_id=HJH9162777.1;transl_table=11 DALFDJ020000005.1 tpg gene 37980 38384 . + . ID=gene-O5D79_001236;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=O5D79_001236 DALFDJ020000005.1 Protein Homology CDS 37980 38384 . + 0 ID=cds-HJH9162778.1;Parent=gene-O5D79_001236;Dbxref=NCBI_GP:HJH9162778.1;Name=HJH9162778.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460746.1;locus_tag=O5D79_001236;product=hydrogenase-1 operon protein HyaE;protein_id=HJH9162778.1;transl_table=11 DALFDJ020000005.1 tpg gene 38381 39229 . + . ID=gene-O5D79_001237;Name=O5D79_001237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001237 DALFDJ020000005.1 Protein Homology CDS 38381 39229 . + 0 ID=cds-HJH9162779.1;Parent=gene-O5D79_001237;Dbxref=NCBI_GP:HJH9162779.1;Name=HJH9162779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460747.1;locus_tag=O5D79_001237;product=hydrogenase expression/formation protein;protein_id=HJH9162779.1;transl_table=11 DALFDJ020000005.1 tpg gene 39304 40848 . + . ID=gene-O5D79_001238;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=O5D79_001238 DALFDJ020000005.1 Protein Homology CDS 39304 40848 . + 0 ID=cds-HJH9162780.1;Parent=gene-O5D79_001238;Dbxref=NCBI_GP:HJH9162780.1;Name=HJH9162780.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460748.1;locus_tag=O5D79_001238;product=cytochrome bd-II oxidase subunit 1;protein_id=HJH9162780.1;transl_table=11 DALFDJ020000005.1 tpg gene 40860 41996 . + . ID=gene-O5D79_001239;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=O5D79_001239 DALFDJ020000005.1 Protein Homology CDS 40860 41996 . + 0 ID=cds-HJH9162781.1;Parent=gene-O5D79_001239;Dbxref=NCBI_GP:HJH9162781.1;Name=HJH9162781.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460749.1;locus_tag=O5D79_001239;product=cytochrome d ubiquinol oxidase subunit II;protein_id=HJH9162781.1;transl_table=11 DALFDJ020000005.1 tpg gene 42009 42098 . + . ID=gene-O5D79_001240;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=O5D79_001240 DALFDJ020000005.1 Protein Homology CDS 42009 42098 . + 0 ID=cds-HJH9162782.1;Parent=gene-O5D79_001240;Dbxref=NCBI_GP:HJH9162782.1;Name=HJH9162782.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460750.1;locus_tag=O5D79_001240;product=cytochrome bd-II oxidase subunit CbdX;protein_id=HJH9162782.1;transl_table=11 DALFDJ020000005.1 tpg gene 42493 43767 . + . ID=gene-O5D79_001241;Name=O5D79_001241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001241 DALFDJ020000005.1 Protein Homology CDS 42493 43767 . + 0 ID=cds-HJH9162783.1;Parent=gene-O5D79_001241;Dbxref=NCBI_GP:HJH9162783.1;Name=HJH9162783.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=O5D79_001241;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=HJH9162783.1;transl_table=11 DALFDJ020000005.1 tpg gene 43981 45693 . + . ID=gene-O5D79_001242;Name=O5D79_001242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001242 DALFDJ020000005.1 Protein Homology CDS 43981 45693 . + 0 ID=cds-HJH9162784.1;Parent=gene-O5D79_001242;Dbxref=NCBI_GP:HJH9162784.1;Name=HJH9162784.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460752.1;locus_tag=O5D79_001242;product=alpha%2Calpha-trehalase;protein_id=HJH9162784.1;transl_table=11 DALFDJ020000005.1 tpg gene 45756 46010 . - . ID=gene-O5D79_001243;Name=O5D79_001243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001243 DALFDJ020000005.1 Protein Homology CDS 45756 46010 . - 0 ID=cds-HJH9162785.1;Parent=gene-O5D79_001243;Dbxref=NCBI_GP:HJH9162785.1;Name=HJH9162785.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460753.1;locus_tag=O5D79_001243;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=HJH9162785.1;transl_table=11 DALFDJ020000005.1 tpg gene 46179 46913 . + . ID=gene-O5D79_001244;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=O5D79_001244 DALFDJ020000005.1 Protein Homology CDS 46179 46913 . + 0 ID=cds-HJH9162786.1;Parent=gene-O5D79_001244;Dbxref=NCBI_GP:HJH9162786.1;Name=HJH9162786.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460754.1;locus_tag=O5D79_001244;product=flagellar brake protein YcgR;protein_id=HJH9162786.1;transl_table=11 DALFDJ020000005.1 tpg gene 46927 47538 . - . ID=gene-O5D79_001245;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=O5D79_001245 DALFDJ020000005.1 Protein Homology CDS 46927 47538 . - 0 ID=cds-HJH9162787.1;Parent=gene-O5D79_001245;Dbxref=NCBI_GP:HJH9162787.1;Name=HJH9162787.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460755.1;locus_tag=O5D79_001245;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=HJH9162787.1;transl_table=11 DALFDJ020000005.1 tpg gene 47709 48623 . + . ID=gene-O5D79_001246;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=O5D79_001246 DALFDJ020000005.1 Protein Homology CDS 47709 48623 . + 0 ID=cds-HJH9162788.1;Parent=gene-O5D79_001246;Dbxref=NCBI_GP:HJH9162788.1;Name=HJH9162788.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460756.1;locus_tag=O5D79_001246;product=muramoyltetrapeptide carboxypeptidase;protein_id=HJH9162788.1;transl_table=11 DALFDJ020000005.1 tpg gene 48720 50453 . + . ID=gene-O5D79_001247;Name=O5D79_001247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001247 DALFDJ020000005.1 Protein Homology CDS 48720 50453 . + 0 ID=cds-HJH9162789.1;Parent=gene-O5D79_001247;Dbxref=NCBI_GP:HJH9162789.1;Name=HJH9162789.1;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460757.1;locus_tag=O5D79_001247;product=potassium/proton antiporter;protein_id=HJH9162789.1;transl_table=11 DALFDJ020000005.1 tpg gene 50515 51585 . - . ID=gene-O5D79_001248;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=O5D79_001248 DALFDJ020000005.1 Protein Homology CDS 50515 51585 . - 0 ID=cds-HJH9162790.1;Parent=gene-O5D79_001248;Dbxref=NCBI_GP:HJH9162790.1;Name=HJH9162790.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460758.1;locus_tag=O5D79_001248;product=catabolic alanine racemase DadX;protein_id=HJH9162790.1;transl_table=11 DALFDJ020000005.1 tpg gene 51599 52897 . - . ID=gene-O5D79_001249;Name=O5D79_001249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001249 DALFDJ020000005.1 Protein Homology CDS 51599 52897 . - 0 ID=cds-HJH9162791.1;Parent=gene-O5D79_001249;Dbxref=NCBI_GP:HJH9162791.1;Name=HJH9162791.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460759.1;locus_tag=O5D79_001249;product=D-amino acid dehydrogenase;protein_id=HJH9162791.1;transl_table=11 DALFDJ020000005.1 tpg gene 53220 54752 . + . ID=gene-O5D79_001250;Name=O5D79_001250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001250 DALFDJ020000005.1 Protein Homology CDS 53220 54752 . + 0 ID=cds-HJH9162792.1;Parent=gene-O5D79_001250;Dbxref=NCBI_GP:HJH9162792.1;Name=HJH9162792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460760.3;locus_tag=O5D79_001250;product=SpoVR family protein;protein_id=HJH9162792.1;transl_table=11 DALFDJ020000005.1 tpg gene 54799 55518 . - . ID=gene-O5D79_001251;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=O5D79_001251 DALFDJ020000005.1 Protein Homology CDS 54799 55518 . - 0 ID=cds-HJH9162793.1;Parent=gene-O5D79_001251;Dbxref=NCBI_GP:HJH9162793.1;Name=HJH9162793.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460761.1;locus_tag=O5D79_001251;product=fatty acid metabolism transcriptional regulator FadR;protein_id=HJH9162793.1;transl_table=11 DALFDJ020000005.1 tpg gene 55738 57282 . + . ID=gene-O5D79_001252;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=O5D79_001252 DALFDJ020000005.1 Protein Homology CDS 55738 57282 . + 0 ID=cds-HJH9162794.1;Parent=gene-O5D79_001252;Dbxref=NCBI_GP:HJH9162794.1;Name=HJH9162794.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460762.1;locus_tag=O5D79_001252;product=Na(+)/H(+) antiporter NhaB;protein_id=HJH9162794.1;transl_table=11 DALFDJ020000005.1 tpg gene 57424 57954 . + . ID=gene-O5D79_001253;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=O5D79_001253 DALFDJ020000005.1 Protein Homology CDS 57424 57954 . + 0 ID=cds-HJH9162795.1;Parent=gene-O5D79_001253;Dbxref=NCBI_GP:HJH9162795.1;Name=HJH9162795.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460763.1;locus_tag=O5D79_001253;product=disulfide bond formation protein DsbB;protein_id=HJH9162795.1;transl_table=11 DALFDJ020000005.1 tpg gene 58063 58404 . + . ID=gene-O5D79_001254;Name=O5D79_001254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001254 DALFDJ020000005.1 Protein Homology CDS 58063 58404 . + 0 ID=cds-HJH9162796.1;Parent=gene-O5D79_001254;Dbxref=NCBI_GP:HJH9162796.1;Name=HJH9162796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460764.1;locus_tag=O5D79_001254;product=DUF1971 domain-containing protein;protein_id=HJH9162796.1;transl_table=11 DALFDJ020000005.1 tpg gene 58476 58649 . - . ID=gene-O5D79_001255;Name=O5D79_001255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001255 DALFDJ020000005.1 Protein Homology CDS 58476 58649 . - 0 ID=cds-HJH9162797.1;Parent=gene-O5D79_001255;Dbxref=NCBI_GP:HJH9162797.1;Name=HJH9162797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460765.1;locus_tag=O5D79_001255;product=GnsA/GnsB family addiction module toxin;protein_id=HJH9162797.1;transl_table=11 DALFDJ020000005.1 tpg gene 58841 58978 . - . ID=gene-O5D79_001256;Name=O5D79_001256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001256 DALFDJ020000005.1 Protein Homology CDS 58841 58978 . - 0 ID=cds-HJH9162798.1;Parent=gene-O5D79_001256;Dbxref=NCBI_GP:HJH9162798.1;Name=HJH9162798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460766.1;locus_tag=O5D79_001256;product=hypothetical protein;protein_id=HJH9162798.1;transl_table=11 DALFDJ020000005.1 tpg gene 59330 59776 . - . ID=gene-O5D79_001257;Name=O5D79_001257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001257 DALFDJ020000005.1 Protein Homology CDS 59330 59776 . - 0 ID=cds-HJH9162799.1;Parent=gene-O5D79_001257;Dbxref=NCBI_GP:HJH9162799.1;Name=HJH9162799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=O5D79_001257;product=YcgN family cysteine cluster protein;protein_id=HJH9162799.1;transl_table=11 DALFDJ020000005.1 tpg gene 59869 60528 . - . ID=gene-O5D79_001258;Name=O5D79_001258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001258 DALFDJ020000005.1 Protein Homology CDS 59869 60528 . - 0 ID=cds-HJH9162800.1;Parent=gene-O5D79_001258;Dbxref=NCBI_GP:HJH9162800.1;Name=HJH9162800.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460768.1;locus_tag=O5D79_001258;product=fumarylacetoacetate hydrolase family protein;protein_id=HJH9162800.1;transl_table=11 DALFDJ020000005.1 tpg gene 60578 60871 . - . ID=gene-O5D79_001259;Name=O5D79_001259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001259 DALFDJ020000005.1 Protein Homology CDS 60578 60871 . - 0 ID=cds-HJH9162801.1;Parent=gene-O5D79_001259;Dbxref=NCBI_GP:HJH9162801.1;Name=HJH9162801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=O5D79_001259;product=YcgL domain-containing protein;protein_id=HJH9162801.1;transl_table=11 DALFDJ020000005.1 tpg gene 60997 61704 . + . ID=gene-O5D79_001260;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=O5D79_001260 DALFDJ020000005.1 Protein Homology CDS 60997 61704 . + 0 ID=cds-HJH9162802.1;Parent=gene-O5D79_001260;Dbxref=NCBI_GP:HJH9162802.1;Name=HJH9162802.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460770.1;locus_tag=O5D79_001260;product=septum site-determining protein MinC;protein_id=HJH9162802.1;transl_table=11 DALFDJ020000005.1 tpg gene 61728 62540 . + . ID=gene-O5D79_001261;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=O5D79_001261 DALFDJ020000005.1 Protein Homology CDS 61728 62540 . + 0 ID=cds-HJH9162803.1;Parent=gene-O5D79_001261;Dbxref=NCBI_GP:HJH9162803.1;Name=HJH9162803.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=O5D79_001261;product=septum site-determining protein MinD;protein_id=HJH9162803.1;transl_table=11 DALFDJ020000005.1 tpg gene 62544 62810 . + . ID=gene-O5D79_001262;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=O5D79_001262 DALFDJ020000005.1 Protein Homology CDS 62544 62810 . + 0 ID=cds-HJH9162804.1;Parent=gene-O5D79_001262;Dbxref=NCBI_GP:HJH9162804.1;Name=HJH9162804.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460772.1;locus_tag=O5D79_001262;product=cell division topological specificity factor MinE;protein_id=HJH9162804.1;transl_table=11 DALFDJ020000005.1 tpg gene 62932 64059 . - . ID=gene-O5D79_001263;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=O5D79_001263 DALFDJ020000005.1 Protein Homology CDS 62932 64059 . - 0 ID=cds-HJH9162805.1;Parent=gene-O5D79_001263;Dbxref=NCBI_GP:HJH9162805.1;Name=HJH9162805.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416318.1;locus_tag=O5D79_001263;product=ribonuclease D;protein_id=HJH9162805.1;transl_table=11 DALFDJ020000005.1 tpg gene 64132 65817 . - . ID=gene-O5D79_001264;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=O5D79_001264 DALFDJ020000005.1 Protein Homology CDS 64132 65817 . - 0 ID=cds-HJH9162806.1;Parent=gene-O5D79_001264;Dbxref=NCBI_GP:HJH9162806.1;Name=HJH9162806.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460774.1;locus_tag=O5D79_001264;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=HJH9162806.1;transl_table=11 DALFDJ020000005.1 tpg gene 66022 66603 . - . ID=gene-O5D79_001265;Name=O5D79_001265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001265 DALFDJ020000005.1 Protein Homology CDS 66022 66603 . - 0 ID=cds-HJH9162807.1;Parent=gene-O5D79_001265;Dbxref=NCBI_GP:HJH9162807.1;Name=HJH9162807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460775.1;locus_tag=O5D79_001265;product=Slp family lipoprotein;protein_id=HJH9162807.1;transl_table=11 DALFDJ020000005.1 tpg gene 66675 67370 . - . ID=gene-O5D79_001266;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=O5D79_001266 DALFDJ020000005.1 Protein Homology CDS 66675 67370 . - 0 ID=cds-HJH9162808.1;Parent=gene-O5D79_001266;Dbxref=NCBI_GP:HJH9162808.1;Name=HJH9162808.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460776.1;locus_tag=O5D79_001266;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=HJH9162808.1;transl_table=11 DALFDJ020000005.1 tpg gene 67428 69338 . - . ID=gene-O5D79_001267;Name=O5D79_001267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001267 DALFDJ020000005.1 Protein Homology CDS 67428 69338 . - 0 ID=cds-HJH9162809.1;Parent=gene-O5D79_001267;Dbxref=NCBI_GP:HJH9162809.1;Name=HJH9162809.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460777.1;locus_tag=O5D79_001267;product=ATP-dependent DNA helicase;protein_id=HJH9162809.1;transl_table=11 DALFDJ020000005.1 tpg gene 69469 69813 . + . ID=gene-O5D79_001268;Name=O5D79_001268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001268 DALFDJ020000005.1 Protein Homology CDS 69469 69813 . + 0 ID=cds-HJH9162810.1;Parent=gene-O5D79_001268;Dbxref=NCBI_GP:HJH9162810.1;Name=HJH9162810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460778.1;locus_tag=O5D79_001268;product=RidA family protein;protein_id=HJH9162810.1;transl_table=11 DALFDJ020000005.1 tpg gene 69819 69998 . - . ID=gene-O5D79_001269;Name=O5D79_001269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001269 DALFDJ020000005.1 Protein Homology CDS 69819 69998 . - 0 ID=cds-HJH9162811.1;Parent=gene-O5D79_001269;Dbxref=NCBI_GP:HJH9162811.1;Name=HJH9162811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460779.1;locus_tag=O5D79_001269;product=YoaH family protein;protein_id=HJH9162811.1;transl_table=11 DALFDJ020000005.1 tpg gene 70079 71443 . + . ID=gene-O5D79_001270;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=O5D79_001270 DALFDJ020000005.1 Protein Homology CDS 70079 71443 . + 0 ID=cds-HJH9162812.1;Parent=gene-O5D79_001270;Dbxref=NCBI_GP:HJH9162812.1;Name=HJH9162812.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460780.1;locus_tag=O5D79_001270;product=aminodeoxychorismate synthase component 1;protein_id=HJH9162812.1;transl_table=11 DALFDJ020000005.1 tpg gene 71447 72025 . + . ID=gene-O5D79_001271;Name=O5D79_001271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001271 DALFDJ020000005.1 Protein Homology CDS 71447 72025 . + 0 ID=cds-HJH9162813.1;Parent=gene-O5D79_001271;Dbxref=NCBI_GP:HJH9162813.1;Name=HJH9162813.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460781.1;locus_tag=O5D79_001271;product=CoA pyrophosphatase;protein_id=HJH9162813.1;transl_table=11 DALFDJ020000005.1 tpg gene 72289 73653 . + . ID=gene-O5D79_001272;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=O5D79_001272 DALFDJ020000005.1 Protein Homology CDS 72289 73653 . + 0 ID=cds-HJH9162814.1;Parent=gene-O5D79_001272;Dbxref=NCBI_GP:HJH9162814.1;Name=HJH9162814.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460782.1;locus_tag=O5D79_001272;product=L-serine ammonia-lyase;protein_id=HJH9162814.1;transl_table=11 DALFDJ020000005.1 tpg gene 73791 75392 . + . ID=gene-O5D79_001273;Name=O5D79_001273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001273 DALFDJ020000005.1 Protein Homology CDS 73791 75392 . + 0 ID=cds-HJH9162815.1;Parent=gene-O5D79_001273;Dbxref=NCBI_GP:HJH9162815.1;Name=HJH9162815.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001192512.1;locus_tag=O5D79_001273;product=EAL domain-containing protein;protein_id=HJH9162815.1;transl_table=11 DALFDJ020000005.1 tpg gene 75414 76973 . - . ID=gene-O5D79_001274;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=O5D79_001274 DALFDJ020000005.1 Protein Homology CDS 75414 76973 . - 0 ID=cds-HJH9162816.1;Parent=gene-O5D79_001274;Dbxref=NCBI_GP:HJH9162816.1;Name=HJH9162816.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460784.2;locus_tag=O5D79_001274;product=CNNM family cation transport protein YoaE;protein_id=HJH9162816.1;transl_table=11 DALFDJ020000005.1 tpg gene 76961 77293 . - . ID=gene-O5D79_001275;Name=O5D79_001275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001275 DALFDJ020000005.1 Protein Homology CDS 76961 77293 . - 0 ID=cds-HJH9162817.1;Parent=gene-O5D79_001275;Dbxref=NCBI_GP:HJH9162817.1;Name=HJH9162817.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046943.2;locus_tag=O5D79_001275;product=protein YoaL;protein_id=HJH9162817.1;transl_table=11 DALFDJ020000005.1 tpg gene 77446 78414 . + . ID=gene-O5D79_001276;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=O5D79_001276 DALFDJ020000005.1 Protein Homology CDS 77446 78414 . + 0 ID=cds-HJH9162818.1;Parent=gene-O5D79_001276;Dbxref=NCBI_GP:HJH9162818.1;Name=HJH9162818.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460786.1;locus_tag=O5D79_001276;product=PTS mannose transporter subunit IIAB;protein_id=HJH9162818.1;transl_table=11 DALFDJ020000005.1 tpg gene 78467 79267 . + . ID=gene-O5D79_001277;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=O5D79_001277 DALFDJ020000005.1 Protein Homology CDS 78467 79267 . + 0 ID=cds-HJH9162819.1;Parent=gene-O5D79_001277;Dbxref=NCBI_GP:HJH9162819.1;Name=HJH9162819.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=O5D79_001277;product=PTS mannose transporter subunit IIC;protein_id=HJH9162819.1;transl_table=11 DALFDJ020000005.1 tpg gene 79280 80131 . + . ID=gene-O5D79_001278;Name=O5D79_001278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001278 DALFDJ020000005.1 Protein Homology CDS 79280 80131 . + 0 ID=cds-HJH9162820.1;Parent=gene-O5D79_001278;Dbxref=NCBI_GP:HJH9162820.1;Name=HJH9162820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228151.1;locus_tag=O5D79_001278;product=PTS mannose transporter subunit IID;protein_id=HJH9162820.1;transl_table=11 DALFDJ020000005.1 tpg gene 80190 80648 . + . ID=gene-O5D79_001279;Name=O5D79_001279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001279 DALFDJ020000005.1 Protein Homology CDS 80190 80648 . + 0 ID=cds-HJH9162821.1;Parent=gene-O5D79_001279;Dbxref=NCBI_GP:HJH9162821.1;Name=HJH9162821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=O5D79_001279;product=DUF986 family protein;protein_id=HJH9162821.1;transl_table=11 DALFDJ020000005.1 cmsearch riboswitch 80845 80946 . + . ID=id-DALFDJ020000005.1:80845..80946;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch DALFDJ020000005.1 tpg gene 81058 81624 . + . ID=gene-O5D79_001280;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=O5D79_001280 DALFDJ020000005.1 Protein Homology CDS 81058 81624 . + 0 ID=cds-HJH9162822.1;Parent=gene-O5D79_001280;Dbxref=NCBI_GP:HJH9162822.1;Name=HJH9162822.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=O5D79_001280;product=manganese efflux pump MntP;protein_id=HJH9162822.1;transl_table=11 DALFDJ020000005.1 tpg gene 81621 82430 . - . ID=gene-O5D79_001281;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=O5D79_001281 DALFDJ020000005.1 Protein Homology CDS 81621 82430 . - 0 ID=cds-HJH9162823.1;Parent=gene-O5D79_001281;Dbxref=NCBI_GP:HJH9162823.1;Name=HJH9162823.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460791.1;locus_tag=O5D79_001281;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=HJH9162823.1;transl_table=11 DALFDJ020000005.1 tpg gene 82496 84241 . - . ID=gene-O5D79_001282;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=O5D79_001282 DALFDJ020000005.1 Protein Homology CDS 82496 84241 . - 0 ID=cds-HJH9162824.1;Parent=gene-O5D79_001282;Dbxref=NCBI_GP:HJH9162824.1;Name=HJH9162824.1;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005886;gbkey=CDS;gene=ftsI;go_component=plasma membrane|0005886||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460792.1;locus_tag=O5D79_001282;product=peptidoglycan glycosyltransferase FtsI;protein_id=HJH9162824.1;transl_table=11 DALFDJ020000005.1 tpg gene 84461 84670 . - . ID=gene-O5D79_001283;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=O5D79_001283 DALFDJ020000005.1 Protein Homology CDS 84461 84670 . - 0 ID=cds-HJH9162825.1;Parent=gene-O5D79_001283;Dbxref=NCBI_GP:HJH9162825.1;Name=HJH9162825.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=O5D79_001283;product=transcription antiterminator/RNA stability regulator CspE;protein_id=HJH9162825.1;transl_table=11 DALFDJ020000005.1 tpg gene 84683 84826 . - . ID=gene-O5D79_001284;Name=O5D79_001284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001284 DALFDJ020000005.1 Protein Homology CDS 84683 84826 . - 0 ID=cds-HJH9162826.1;Parent=gene-O5D79_001284;Dbxref=NCBI_GP:HJH9162826.1;Name=HJH9162826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=O5D79_001284;product=DUF2627 domain-containing protein;protein_id=HJH9162826.1;transl_table=11 DALFDJ020000005.1 tpg gene 85475 85762 . - . ID=gene-O5D79_001285;Name=O5D79_001285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001285 DALFDJ020000005.1 Protein Homology CDS 85475 85762 . - 0 ID=cds-HJH9162827.1;Parent=gene-O5D79_001285;Dbxref=NCBI_GP:HJH9162827.1;Name=HJH9162827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460795.1;locus_tag=O5D79_001285;product=YebO family protein;protein_id=HJH9162827.1;transl_table=11 DALFDJ020000005.1 tpg gene 85833 85976 . - . ID=gene-O5D79_001286;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=O5D79_001286 DALFDJ020000005.1 Protein Homology CDS 85833 85976 . - 0 ID=cds-HJH9162828.1;Parent=gene-O5D79_001286;Dbxref=NCBI_GP:HJH9162828.1;Name=HJH9162828.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460796.1;locus_tag=O5D79_001286;product=PhoP/PhoQ regulator MgrB;protein_id=HJH9162828.1;transl_table=11 DALFDJ020000005.1 tpg gene 86134 86373 . + . ID=gene-O5D79_001287;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=O5D79_001287 DALFDJ020000005.1 Protein Homology CDS 86134 86373 . + 0 ID=cds-HJH9162829.1;Parent=gene-O5D79_001287;Dbxref=NCBI_GP:HJH9162829.1;Name=HJH9162829.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460797.1;locus_tag=O5D79_001287;product=invasion protein YobH;protein_id=HJH9162829.1;transl_table=11 DALFDJ020000005.1 tpg gene 86586 87377 . - . ID=gene-O5D79_001288;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=O5D79_001288 DALFDJ020000005.1 Protein Homology CDS 86586 87377 . - 0 ID=cds-HJH9162830.1;Parent=gene-O5D79_001288;Dbxref=NCBI_GP:HJH9162830.1;Name=HJH9162830.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460798.1;locus_tag=O5D79_001288;product=DNA-binding transcriptional regulator KdgR;protein_id=HJH9162830.1;transl_table=11 DALFDJ020000005.1 tpg gene 87553 88926 . + . ID=gene-O5D79_001289;Name=O5D79_001289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001289 DALFDJ020000005.1 Protein Homology CDS 87553 88926 . + 0 ID=cds-HJH9162831.1;Parent=gene-O5D79_001289;Dbxref=NCBI_GP:HJH9162831.1;Name=HJH9162831.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460799.1;locus_tag=O5D79_001289;product=MFS transporter;protein_id=HJH9162831.1;transl_table=11 DALFDJ020000005.1 tpg gene 88974 89855 . - . ID=gene-O5D79_001290;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=O5D79_001290 DALFDJ020000005.1 Protein Homology CDS 88974 89855 . - 0 ID=cds-HJH9162832.1;Parent=gene-O5D79_001290;Dbxref=NCBI_GP:HJH9162832.1;Name=HJH9162832.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=O5D79_001290;product=protease HtpX;protein_id=HJH9162832.1;transl_table=11 DALFDJ020000005.1 tpg gene 90049 92097 . - . ID=gene-O5D79_001291;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=O5D79_001291 DALFDJ020000005.1 Protein Homology CDS 90049 92097 . - 0 ID=cds-HJH9162833.1;Parent=gene-O5D79_001291;Dbxref=NCBI_GP:HJH9162833.1;Name=HJH9162833.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=O5D79_001291;product=carboxy terminal-processing peptidase;protein_id=HJH9162833.1;transl_table=11 DALFDJ020000005.1 tpg gene 92117 92803 . - . ID=gene-O5D79_001292;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=O5D79_001292 DALFDJ020000005.1 Protein Homology CDS 92117 92803 . - 0 ID=cds-HJH9162834.1;Parent=gene-O5D79_001292;Dbxref=NCBI_GP:HJH9162834.1;Name=HJH9162834.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460802.1;locus_tag=O5D79_001292;product=RNA chaperone ProQ;protein_id=HJH9162834.1;transl_table=11 DALFDJ020000005.1 tpg gene 92901 93398 . - . ID=gene-O5D79_001293;Name=O5D79_001293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001293 DALFDJ020000005.1 Protein Homology CDS 92901 93398 . - 0 ID=cds-HJH9162835.1;Parent=gene-O5D79_001293;Dbxref=NCBI_GP:HJH9162835.1;Name=HJH9162835.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416346.4;locus_tag=O5D79_001293;product=GAF domain-containing protein;protein_id=HJH9162835.1;transl_table=11 DALFDJ020000005.1 tpg gene 93527 94810 . + . ID=gene-O5D79_001294;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=O5D79_001294 DALFDJ020000005.1 Protein Homology CDS 93527 94810 . + 0 ID=cds-HJH9162836.1;Parent=gene-O5D79_001294;Dbxref=NCBI_GP:HJH9162836.1;Name=HJH9162836.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=O5D79_001294;product=membrane integrity lipid transport subunit YebS;protein_id=HJH9162836.1;transl_table=11 DALFDJ020000005.1 tpg gene 94779 97412 . + . ID=gene-O5D79_001295;Name=O5D79_001295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001295 DALFDJ020000005.1 Protein Homology CDS 94779 97412 . + 0 ID=cds-HJH9162837.1;Parent=gene-O5D79_001295;Dbxref=NCBI_GP:HJH9162837.1;Name=HJH9162837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=O5D79_001295;product=MlaD family protein;protein_id=HJH9162837.1;transl_table=11 DALFDJ020000005.1 tpg gene 97490 98929 . + . ID=gene-O5D79_001296;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=O5D79_001296 DALFDJ020000005.1 Protein Homology CDS 97490 98929 . + 0 ID=cds-HJH9162838.1;Parent=gene-O5D79_001296;Dbxref=NCBI_GP:HJH9162838.1;Name=HJH9162838.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460806.1;locus_tag=O5D79_001296;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=HJH9162838.1;transl_table=11 DALFDJ020000005.1 tpg gene 99047 99283 . + . ID=gene-O5D79_001297;Name=O5D79_001297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001297 DALFDJ020000005.1 Protein Homology CDS 99047 99283 . + 0 ID=cds-HJH9162839.1;Parent=gene-O5D79_001297;Dbxref=NCBI_GP:HJH9162839.1;Name=HJH9162839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=O5D79_001297;product=YebV family protein;protein_id=HJH9162839.1;transl_table=11 DALFDJ020000005.1 tpg gene 99394 99585 . + . ID=gene-O5D79_001298;Name=O5D79_001298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001298 DALFDJ020000005.1 Protein Homology CDS 99394 99585 . + 0 ID=cds-HJH9162840.1;Parent=gene-O5D79_001298;Dbxref=NCBI_GP:HJH9162840.1;Name=HJH9162840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460808.1;locus_tag=O5D79_001298;product=YebW family protein;protein_id=HJH9162840.1;transl_table=11 DALFDJ020000005.1 tpg gene 99604 100254 . - . ID=gene-O5D79_001299;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=O5D79_001299 DALFDJ020000005.1 Protein Homology CDS 99604 100254 . - 0 ID=cds-HJH9162841.1;Parent=gene-O5D79_001299;Dbxref=NCBI_GP:HJH9162841.1;Name=HJH9162841.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460809.1;locus_tag=O5D79_001299;product=protein-serine/threonine phosphatase;protein_id=HJH9162841.1;transl_table=11 DALFDJ020000005.1 tpg gene 100477 100641 . - . ID=gene-O5D79_001300;Name=O5D79_001300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001300 DALFDJ020000005.1 Protein Homology CDS 100477 100641 . - 0 ID=cds-HJH9162842.1;Parent=gene-O5D79_001300;Dbxref=NCBI_GP:HJH9162842.1;Name=HJH9162842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460810.1;locus_tag=O5D79_001300;product=hypothetical protein;protein_id=HJH9162842.1;transl_table=11 DALFDJ020000005.1 tpg gene 100926 101648 . - . ID=gene-O5D79_001301;Name=sopE2;gbkey=Gene;gene=sopE2;gene_biotype=protein_coding;locus_tag=O5D79_001301 DALFDJ020000005.1 Protein Homology CDS 100926 101648 . - 0 ID=cds-HJH9162843.1;Parent=gene-O5D79_001301;Dbxref=NCBI_GP:HJH9162843.1;Name=HJH9162843.1;gbkey=CDS;gene=sopE2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460811.1;locus_tag=O5D79_001301;product=SPI-1 type III secretion system guanine nucleotide exchange factor SopE2;protein_id=HJH9162843.1;transl_table=11 DALFDJ020000005.1 tpg gene 102333 102728 . + . ID=gene-O5D79_001302;Name=O5D79_001302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001302 DALFDJ020000005.1 Protein Homology CDS 102333 102728 . + 0 ID=cds-HJH9162844.1;Parent=gene-O5D79_001302;Dbxref=NCBI_GP:HJH9162844.1;Name=HJH9162844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460812.1;locus_tag=O5D79_001302;product=DUF1398 domain-containing protein;protein_id=HJH9162844.1;transl_table=11 DALFDJ020000005.1 tpg gene 103057 103533 . + . ID=gene-O5D79_001303;Name=O5D79_001303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001303 DALFDJ020000005.1 Protein Homology CDS 103057 103533 . + 0 ID=cds-HJH9162845.1;Parent=gene-O5D79_001303;Dbxref=NCBI_GP:HJH9162845.1;Name=HJH9162845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000030934.1;locus_tag=O5D79_001303;product=hypothetical protein;protein_id=HJH9162845.1;transl_table=11 DALFDJ020000005.1 tpg gene 103921 104340 . - . ID=gene-O5D79_001304;Name=O5D79_001304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001304 DALFDJ020000005.1 Protein Homology CDS 103921 104340 . - 0 ID=cds-HJH9162846.1;Parent=gene-O5D79_001304;Dbxref=NCBI_GP:HJH9162846.1;Name=HJH9162846.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460813.1;locus_tag=O5D79_001304;product=GNAT family N-acetyltransferase;protein_id=HJH9162846.1;transl_table=11 DALFDJ020000005.1 tpg gene 104710 104979 . + . ID=gene-O5D79_001305;Name=O5D79_001305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001305 DALFDJ020000005.1 Protein Homology CDS 104710 104979 . + 0 ID=cds-HJH9162847.1;Parent=gene-O5D79_001305;Dbxref=NCBI_GP:HJH9162847.1;Name=HJH9162847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460814.1;locus_tag=O5D79_001305;product=hypothetical protein;protein_id=HJH9162847.1;transl_table=11 DALFDJ020000005.1 tpg gene 105145 105285 . + . ID=gene-O5D79_001306;Name=O5D79_001306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001306 DALFDJ020000005.1 Protein Homology CDS 105145 105285 . + 0 ID=cds-HJH9162848.1;Parent=gene-O5D79_001306;Dbxref=NCBI_GP:HJH9162848.1;Name=HJH9162848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576018.1;locus_tag=O5D79_001306;product=hypothetical protein;protein_id=HJH9162848.1;transl_table=11 DALFDJ020000005.1 tpg pseudogene 105431 106639 . - . ID=gene-O5D79_001307;Name=O5D79_001307;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001307;pseudo=true DALFDJ020000005.1 Protein Homology CDS 105431 106639 . - 0 ID=cds-O5D79_001307;Parent=gene-O5D79_001307;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=O5D79_001307;product=IS256 family transposase;pseudo=true;transl_table=11 DALFDJ020000005.1 tpg pseudogene 106709 107130 . + . ID=gene-O5D79_001308;Name=O5D79_001308;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001308;pseudo=true DALFDJ020000005.1 Protein Homology CDS 106709 107130 . + 0 ID=cds-O5D79_001308;Parent=gene-O5D79_001308;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001189081.1;locus_tag=O5D79_001308;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 DALFDJ020000005.1 tpg gene 108427 109341 . + . ID=gene-O5D79_001309;Name=O5D79_001309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001309 DALFDJ020000005.1 Protein Homology CDS 108427 109341 . + 0 ID=cds-HJH9162849.1;Parent=gene-O5D79_001309;Dbxref=NCBI_GP:HJH9162849.1;Name=HJH9162849.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460818.1;locus_tag=O5D79_001309;product=DMT family transporter;protein_id=HJH9162849.1;transl_table=11 DALFDJ020000005.1 tpg gene 109474 109632 . + . ID=gene-O5D79_001310;Name=O5D79_001310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001310 DALFDJ020000005.1 Protein Homology CDS 109474 109632 . + 0 ID=cds-HJH9162850.1;Parent=gene-O5D79_001310;Dbxref=NCBI_GP:HJH9162850.1;Name=HJH9162850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460819.1;locus_tag=O5D79_001310;product=DUF5993 family protein;protein_id=HJH9162850.1;transl_table=11 DALFDJ020000005.1 tpg gene 109642 110256 . + . ID=gene-O5D79_001311;Name=O5D79_001311;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001311 DALFDJ020000005.1 Protein Homology CDS 109642 110256 . + 0 ID=cds-HJH9162851.1;Parent=gene-O5D79_001311;Dbxref=NCBI_GP:HJH9162851.1;Name=HJH9162851.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460820.1;locus_tag=O5D79_001311;product=disulfide bond formation protein B;protein_id=HJH9162851.1;transl_table=11 DALFDJ020000005.1 tpg gene 110665 112644 . - . ID=gene-O5D79_001312;Name=O5D79_001312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001312 DALFDJ020000005.1 Protein Homology CDS 110665 112644 . - 0 ID=cds-HJH9162852.1;Parent=gene-O5D79_001312;Dbxref=NCBI_GP:HJH9162852.1;Name=HJH9162852.1;Ontology_term=GO:0008484,GO:0046872,GO:0046983;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237394.1;locus_tag=O5D79_001312;product=alkyl/aryl-sulfatase;protein_id=HJH9162852.1;transl_table=11 DALFDJ020000005.1 tpg gene 113040 114170 . + . ID=gene-O5D79_001313;Name=O5D79_001313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001313 DALFDJ020000005.1 Protein Homology CDS 113040 114170 . + 0 ID=cds-HJH9162853.1;Parent=gene-O5D79_001313;Dbxref=NCBI_GP:HJH9162853.1;Name=HJH9162853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000529511.1;locus_tag=O5D79_001313;product=membrane-associated sensor domain-containing protein;protein_id=HJH9162853.1;transl_table=11 DALFDJ020000005.1 tpg gene 114457 114852 . - . ID=gene-O5D79_001314;Name=O5D79_001314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001314 DALFDJ020000005.1 Protein Homology CDS 114457 114852 . - 0 ID=cds-HJH9162854.1;Parent=gene-O5D79_001314;Dbxref=NCBI_GP:HJH9162854.1;Name=HJH9162854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089414.1;locus_tag=O5D79_001314;product=DUF977 family protein;protein_id=HJH9162854.1;transl_table=11 DALFDJ020000005.1 tpg pseudogene 114866 114976 . - . ID=gene-O5D79_001315;Name=O5D79_001315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001315;pseudo=true DALFDJ020000005.1 Protein Homology CDS 114866 114976 . - 0 ID=cds-O5D79_001315;Parent=gene-O5D79_001315;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000140163.1;locus_tag=O5D79_001315;product=replication protein P;pseudo=true;transl_table=11 DALFDJ020000005.1 tpg pseudogene 114973 115337 . + . ID=gene-O5D79_001316;Name=O5D79_001316;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001316;pseudo=true DALFDJ020000005.1 Protein Homology CDS 114973 115337 . + 0 ID=cds-O5D79_001316;Parent=gene-O5D79_001316;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006259,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415865.1;locus_tag=O5D79_001316;product=recombinase RecT;pseudo=true;transl_table=11 DALFDJ020000005.1 tpg pseudogene 115336 115644 . + . ID=gene-O5D79_001317;Name=O5D79_001317;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001317;pseudo=true DALFDJ020000005.1 Protein Homology CDS 115336 115644 . + 0 ID=cds-O5D79_001317;Parent=gene-O5D79_001317;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000087641.1;locus_tag=O5D79_001317;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 DALFDJ020000005.1 tpg gene 116578 117378 . + . ID=gene-O5D79_001318;Name=O5D79_001318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001318 DALFDJ020000005.1 Protein Homology CDS 116578 117378 . + 0 ID=cds-HJH9162855.1;Parent=gene-O5D79_001318;Dbxref=NCBI_GP:HJH9162855.1;Name=HJH9162855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586172.1;locus_tag=O5D79_001318;product=hypothetical protein;protein_id=HJH9162855.1;transl_table=11 DALFDJ020000005.1 tpg pseudogene 117407 117549 . - . ID=gene-O5D79_001319;Name=O5D79_001319;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001319;pseudo=true DALFDJ020000005.1 Protein Homology CDS 117407 117549 . - 0 ID=cds-O5D79_001319;Parent=gene-O5D79_001319;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006673699.1;locus_tag=O5D79_001319;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000005.1 tpg gene 117858 117923 . - . ID=gene-O5D79_001320;Name=O5D79_001320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001320 DALFDJ020000005.1 Protein Homology CDS 117858 117923 . - 0 ID=cds-HJH9162856.1;Parent=gene-O5D79_001320;Dbxref=NCBI_GP:HJH9162856.1;Name=HJH9162856.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024830.6;locus_tag=O5D79_001320;product=hypothetical protein;protein_id=HJH9162856.1;transl_table=11 DALFDJ020000005.1 tpg gene 118026 118796 . + . ID=gene-O5D79_001321;Name=O5D79_001321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001321 DALFDJ020000005.1 Protein Homology CDS 118026 118796 . + 0 ID=cds-HJH9162857.1;Parent=gene-O5D79_001321;Dbxref=NCBI_GP:HJH9162857.1;Name=HJH9162857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750685.1;locus_tag=O5D79_001321;product=transporter substrate-binding domain-containing protein;protein_id=HJH9162857.1;transl_table=11 DALFDJ020000005.1 tpg pseudogene 118813 118989 . + . ID=gene-O5D79_001322;Name=O5D79_001322;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001322;pseudo=true DALFDJ020000005.1 Protein Homology CDS 118813 118989 . + 0 ID=cds-O5D79_001322;Parent=gene-O5D79_001322;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421109.1;locus_tag=O5D79_001322;product=tail fiber assembly protein;pseudo=true;transl_table=11 DALFDJ020000005.1 tpg gene 119233 119418 . + . ID=gene-O5D79_001323;Name=O5D79_001323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001323 DALFDJ020000005.1 Protein Homology CDS 119233 119418 . + 0 ID=cds-HJH9162858.1;Parent=gene-O5D79_001323;Dbxref=NCBI_GP:HJH9162858.1;Name=HJH9162858.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026627.6;locus_tag=O5D79_001323;product=PagK family vesicle-borne virulence factor;protein_id=HJH9162858.1;transl_table=11 DALFDJ020000005.1 tpg pseudogene 119509 119618 . - . ID=gene-O5D79_001324;Name=O5D79_001324;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001324;pseudo=true DALFDJ020000005.1 Protein Homology CDS 119509 119618 . - 0 ID=cds-O5D79_001324;Parent=gene-O5D79_001324;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461632.1;locus_tag=O5D79_001324;product=tail fiber assembly protein;pseudo=true;transl_table=11 DALFDJ020000005.1 tpg gene 119667 119999 . - . ID=gene-O5D79_001325;Name=O5D79_001325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001325 DALFDJ020000005.1 Protein Homology CDS 119667 119999 . - 0 ID=cds-HJH9162859.1;Parent=gene-O5D79_001325;Dbxref=NCBI_GP:HJH9162859.1;Name=HJH9162859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033280.1;locus_tag=O5D79_001325;product=DUF1353 domain-containing protein;protein_id=HJH9162859.1;transl_table=11 DALFDJ020000005.1 tpg pseudogene 120105 120176 . - . ID=gene-O5D79_001326;Name=O5D79_001326;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001326;pseudo=true DALFDJ020000005.1 Protein Homology CDS 120105 120176 . - 0 ID=cds-O5D79_001326;Parent=gene-O5D79_001326;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025659.6;locus_tag=O5D79_001326;product=DUF4376 domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000005.1 tpg gene 120173 120394 . - . ID=gene-O5D79_001327;Name=O5D79_001327;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001327 DALFDJ020000005.1 Protein Homology CDS 120173 120394 . - 0 ID=cds-HJH9162860.1;Parent=gene-O5D79_001327;Dbxref=NCBI_GP:HJH9162860.1;Name=HJH9162860.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025659.6;locus_tag=O5D79_001327;product=DUF4376 domain-containing protein;protein_id=HJH9162860.1;transl_table=11 DALFDJ020000005.1 tpg pseudogene 120439 120643 . - . ID=gene-O5D79_001328;Name=O5D79_001328;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001328;pseudo=true DALFDJ020000005.1 Protein Homology CDS 120439 120643 . - 0 ID=cds-O5D79_001328;Parent=gene-O5D79_001328;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461522.1;locus_tag=O5D79_001328;product=DUF1353 domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000005.1 tpg pseudogene 120639 120974 . - . ID=gene-O5D79_001329;Name=O5D79_001329;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001329;pseudo=true DALFDJ020000005.1 Protein Homology CDS 120639 120974 . - 0 ID=cds-O5D79_001329;Parent=gene-O5D79_001329;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252716.1;locus_tag=O5D79_001329;product=hypothetical protein;pseudo=true;transl_table=11 DALFDJ020000005.1 tpg pseudogene 121053 121896 . + . ID=gene-O5D79_001330;Name=O5D79_001330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001330;pseudo=true DALFDJ020000005.1 Protein Homology CDS 121053 121896 . + 0 ID=cds-O5D79_001330;Parent=gene-O5D79_001330;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466154.1;locus_tag=O5D79_001330;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 DALFDJ020000005.1 tpg gene 122270 122623 . - . ID=gene-O5D79_001331;Name=O5D79_001331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001331 DALFDJ020000005.1 Protein Homology CDS 122270 122623 . - 0 ID=cds-HJH9162861.1;Parent=gene-O5D79_001331;Dbxref=NCBI_GP:HJH9162861.1;Name=HJH9162861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460830.1;locus_tag=O5D79_001331;product=YebY family protein;protein_id=HJH9162861.1;transl_table=11 DALFDJ020000005.1 tpg gene 122640 123515 . - . ID=gene-O5D79_001332;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=O5D79_001332 DALFDJ020000005.1 Protein Homology CDS 122640 123515 . - 0 ID=cds-HJH9162862.1;Parent=gene-O5D79_001332;Dbxref=NCBI_GP:HJH9162862.1;Name=HJH9162862.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460831.1;locus_tag=O5D79_001332;product=copper homeostasis membrane protein CopD;protein_id=HJH9162862.1;transl_table=11 DALFDJ020000005.1 tpg gene 123516 123890 . - . ID=gene-O5D79_001333;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=O5D79_001333 DALFDJ020000005.1 Protein Homology CDS 123516 123890 . - 0 ID=cds-HJH9162863.1;Parent=gene-O5D79_001333;Dbxref=NCBI_GP:HJH9162863.1;Name=HJH9162863.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460832.1;locus_tag=O5D79_001333;product=CopC domain-containing protein YobA;protein_id=HJH9162863.1;transl_table=11 DALFDJ020000005.1 tpg gene 124028 124258 . + . ID=gene-O5D79_001334;Name=O5D79_001334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001334 DALFDJ020000005.1 Protein Homology CDS 124028 124258 . + 0 ID=cds-HJH9162864.1;Parent=gene-O5D79_001334;Dbxref=NCBI_GP:HJH9162864.1;Name=HJH9162864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460833.1;locus_tag=O5D79_001334;product=DNA polymerase III subunit theta;protein_id=HJH9162864.1;transl_table=11 DALFDJ020000005.1 tpg gene 124366 125022 . + . ID=gene-O5D79_001335;Name=O5D79_001335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001335 DALFDJ020000005.1 Protein Homology CDS 124366 125022 . + 0 ID=cds-HJH9162865.1;Parent=gene-O5D79_001335;Dbxref=NCBI_GP:HJH9162865.1;Name=HJH9162865.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460834.1;locus_tag=O5D79_001335;product=nitrilase-related carbon-nitrogen hydrolase;protein_id=HJH9162865.1;transl_table=11 DALFDJ020000005.1 tpg gene 125046 125744 . + . ID=gene-O5D79_001336;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=O5D79_001336 DALFDJ020000005.1 Protein Homology CDS 125046 125744 . + 0 ID=cds-HJH9162866.1;Parent=gene-O5D79_001336;Dbxref=NCBI_GP:HJH9162866.1;Name=HJH9162866.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460835.1;locus_tag=O5D79_001336;product=exodeoxyribonuclease X;protein_id=HJH9162866.1;transl_table=11 DALFDJ020000005.1 tpg gene 125781 127832 . - . ID=gene-O5D79_001337;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=O5D79_001337 DALFDJ020000005.1 Protein Homology CDS 125781 127832 . - 0 ID=cds-HJH9162867.1;Parent=gene-O5D79_001337;Dbxref=NCBI_GP:HJH9162867.1;Name=HJH9162867.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460836.1;locus_tag=O5D79_001337;product=oligopeptidase B;protein_id=HJH9162867.1;transl_table=11 DALFDJ020000005.1 tpg gene 128045 128704 . - . ID=gene-O5D79_001338;Name=O5D79_001338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001338 DALFDJ020000005.1 Protein Homology CDS 128045 128704 . - 0 ID=cds-HJH9162868.1;Parent=gene-O5D79_001338;Dbxref=NCBI_GP:HJH9162868.1;Name=HJH9162868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=O5D79_001338;product=tellurite resistance TerB family protein;protein_id=HJH9162868.1;transl_table=11 DALFDJ020000005.1 tpg gene 128798 129151 . - . ID=gene-O5D79_001339;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=O5D79_001339 DALFDJ020000005.1 Protein Homology CDS 128798 129151 . - 0 ID=cds-HJH9162869.1;Parent=gene-O5D79_001339;Dbxref=NCBI_GP:HJH9162869.1;Name=HJH9162869.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460838.1;locus_tag=O5D79_001339;product=protein YebF;protein_id=HJH9162869.1;transl_table=11 DALFDJ020000005.1 tpg gene 129219 129509 . - . ID=gene-O5D79_001340;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=O5D79_001340 DALFDJ020000005.1 Protein Homology CDS 129219 129509 . - 0 ID=cds-HJH9162870.1;Parent=gene-O5D79_001340;Dbxref=NCBI_GP:HJH9162870.1;Name=HJH9162870.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460839.1;locus_tag=O5D79_001340;product=DNA damage-inducible protein YebG;protein_id=HJH9162870.1;transl_table=11 DALFDJ020000005.1 tpg gene 129640 130818 . + . ID=gene-O5D79_001341;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=O5D79_001341 DALFDJ020000005.1 Protein Homology CDS 129640 130818 . + 0 ID=cds-HJH9162871.1;Parent=gene-O5D79_001341;Dbxref=NCBI_GP:HJH9162871.1;Name=HJH9162871.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460840.1;locus_tag=O5D79_001341;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=HJH9162871.1;transl_table=11 DALFDJ020000005.1 tpg gene 130918 131559 . - . ID=gene-O5D79_001342;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=O5D79_001342 DALFDJ020000005.1 Protein Homology CDS 130918 131559 . - 0 ID=cds-HJH9162872.1;Parent=gene-O5D79_001342;Dbxref=NCBI_GP:HJH9162872.1;Name=HJH9162872.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=O5D79_001342;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=HJH9162872.1;transl_table=11 DALFDJ020000005.1 tpg gene 131597 133408 . - . ID=gene-O5D79_001343;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=O5D79_001343 DALFDJ020000005.1 Protein Homology CDS 131597 133408 . - 0 ID=cds-HJH9162873.1;Parent=gene-O5D79_001343;Dbxref=NCBI_GP:HJH9162873.1;Name=HJH9162873.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460842.1;locus_tag=O5D79_001343;product=phosphogluconate dehydratase;protein_id=HJH9162873.1;transl_table=11 DALFDJ020000005.1 tpg gene 133643 135118 . - . ID=gene-O5D79_001344;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=O5D79_001344 DALFDJ020000005.1 Protein Homology CDS 133643 135118 . - 0 ID=cds-HJH9162874.1;Parent=gene-O5D79_001344;Dbxref=NCBI_GP:HJH9162874.1;Name=HJH9162874.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=O5D79_001344;product=glucose-6-phosphate dehydrogenase;protein_id=HJH9162874.1;transl_table=11 DALFDJ020000005.1 tpg gene 135460 136329 . + . ID=gene-O5D79_001345;Name=O5D79_001345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001345 DALFDJ020000005.1 Protein Homology CDS 135460 136329 . + 0 ID=cds-HJH9162875.1;Parent=gene-O5D79_001345;Dbxref=NCBI_GP:HJH9162875.1;Name=HJH9162875.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700,GO:0097367;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,carbohydrate derivative binding|0097367||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460844.1;locus_tag=O5D79_001345;product=MurR/RpiR family transcriptional regulator;protein_id=HJH9162875.1;transl_table=11 DALFDJ020000005.1 tpg gene 136453 137895 . + . ID=gene-O5D79_001346;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=O5D79_001346 DALFDJ020000005.1 Protein Homology CDS 136453 137895 . + 0 ID=cds-HJH9162876.1;Parent=gene-O5D79_001346;Dbxref=NCBI_GP:HJH9162876.1;Name=HJH9162876.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=O5D79_001346;product=pyruvate kinase;protein_id=HJH9162876.1;transl_table=11 DALFDJ020000005.1 tpg gene 137968 138939 . - . ID=gene-O5D79_001347;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=O5D79_001347 DALFDJ020000005.1 Protein Homology CDS 137968 138939 . - 0 ID=cds-HJH9162877.1;Parent=gene-O5D79_001347;Dbxref=NCBI_GP:HJH9162877.1;Name=HJH9162877.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460846.1;locus_tag=O5D79_001347;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=HJH9162877.1;transl_table=11 DALFDJ020000005.1 tpg gene 139056 140375 . - . ID=gene-O5D79_001348;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=O5D79_001348 DALFDJ020000005.1 Protein Homology CDS 139056 140375 . - 0 ID=cds-HJH9162878.1;Parent=gene-O5D79_001348;Dbxref=NCBI_GP:HJH9162878.1;Name=HJH9162878.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=O5D79_001348;product=murein DD-endopeptidase MepM;protein_id=HJH9162878.1;transl_table=11 DALFDJ020000005.1 tpg gene 140391 141335 . - . ID=gene-O5D79_001349;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=O5D79_001349 DALFDJ020000005.1 Protein Homology CDS 140391 141335 . - 0 ID=cds-HJH9162879.1;Parent=gene-O5D79_001349;Dbxref=NCBI_GP:HJH9162879.1;Name=HJH9162879.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=O5D79_001349;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=HJH9162879.1;transl_table=11 DALFDJ020000005.1 tpg gene 141414 142169 . + . ID=gene-O5D79_001350;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=O5D79_001350 DALFDJ020000005.1 Protein Homology CDS 141414 142169 . + 0 ID=cds-HJH9162880.1;Parent=gene-O5D79_001350;Dbxref=NCBI_GP:HJH9162880.1;Name=HJH9162880.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=O5D79_001350;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=HJH9162880.1;transl_table=11 DALFDJ020000005.1 tpg gene 142166 142951 . + . ID=gene-O5D79_001351;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=O5D79_001351 DALFDJ020000005.1 Protein Homology CDS 142166 142951 . + 0 ID=cds-HJH9162881.1;Parent=gene-O5D79_001351;Dbxref=NCBI_GP:HJH9162881.1;Name=HJH9162881.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460850.1;locus_tag=O5D79_001351;product=zinc ABC transporter permease subunit ZnuB;protein_id=HJH9162881.1;transl_table=11 DALFDJ020000005.1 tpg gene 143030 144040 . - . ID=gene-O5D79_001352;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=O5D79_001352 DALFDJ020000005.1 Protein Homology CDS 143030 144040 . - 0 ID=cds-HJH9162882.1;Parent=gene-O5D79_001352;Dbxref=NCBI_GP:HJH9162882.1;Name=HJH9162882.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460851.1;locus_tag=O5D79_001352;product=Holliday junction branch migration DNA helicase RuvB;protein_id=HJH9162882.1;transl_table=11 DALFDJ020000005.1 tpg gene 144049 144660 . - . ID=gene-O5D79_001353;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=O5D79_001353 DALFDJ020000005.1 Protein Homology CDS 144049 144660 . - 0 ID=cds-HJH9162883.1;Parent=gene-O5D79_001353;Dbxref=NCBI_GP:HJH9162883.1;Name=HJH9162883.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=O5D79_001353;product=Holliday junction branch migration protein RuvA;protein_id=HJH9162883.1;transl_table=11 DALFDJ020000005.1 tpg gene 145020 145712 . - . ID=gene-O5D79_001354;Name=O5D79_001354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001354 DALFDJ020000005.1 Protein Homology CDS 145020 145712 . - 0 ID=cds-HJH9162884.1;Parent=gene-O5D79_001354;Dbxref=NCBI_GP:HJH9162884.1;Name=HJH9162884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227317.1;locus_tag=O5D79_001354;product=hypothetical protein;protein_id=HJH9162884.1;transl_table=11 DALFDJ020000005.1 tpg gene 145921 146520 . + . ID=gene-O5D79_001355;Name=O5D79_001355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001355 DALFDJ020000005.1 Protein Homology CDS 145921 146520 . + 0 ID=cds-HJH9162885.1;Parent=gene-O5D79_001355;Dbxref=NCBI_GP:HJH9162885.1;Name=HJH9162885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460854.1;locus_tag=O5D79_001355;product=YebB family permuted papain-like enzyme;protein_id=HJH9162885.1;transl_table=11 DALFDJ020000005.1 tpg gene 146522 147043 . - . ID=gene-O5D79_001356;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=O5D79_001356 DALFDJ020000005.1 Protein Homology CDS 146522 147043 . - 0 ID=cds-HJH9162886.1;Parent=gene-O5D79_001356;Dbxref=NCBI_GP:HJH9162886.1;Name=HJH9162886.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=O5D79_001356;product=crossover junction endodeoxyribonuclease RuvC;protein_id=HJH9162886.1;transl_table=11 DALFDJ020000005.1 tpg gene 147080 147820 . - . ID=gene-O5D79_001357;Name=O5D79_001357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001357 DALFDJ020000005.1 Protein Homology CDS 147080 147820 . - 0 ID=cds-HJH9162887.1;Parent=gene-O5D79_001357;Dbxref=NCBI_GP:HJH9162887.1;Name=HJH9162887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=O5D79_001357;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=HJH9162887.1;transl_table=11 DALFDJ020000005.1 tpg gene 147850 148302 . - . ID=gene-O5D79_001358;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=O5D79_001358 DALFDJ020000005.1 Protein Homology CDS 147850 148302 . - 0 ID=cds-HJH9162888.1;Parent=gene-O5D79_001358;Dbxref=NCBI_GP:HJH9162888.1;Name=HJH9162888.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460857.1;locus_tag=O5D79_001358;product=dihydroneopterin triphosphate diphosphatase;protein_id=HJH9162888.1;transl_table=11 DALFDJ020000005.1 tpg gene 148396 150168 . - . ID=gene-O5D79_001359;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=O5D79_001359 DALFDJ020000005.1 Protein Homology CDS 148396 150168 . - 0 ID=cds-HJH9162889.1;Parent=gene-O5D79_001359;Dbxref=NCBI_GP:HJH9162889.1;Name=HJH9162889.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460858.1;locus_tag=O5D79_001359;product=aspartate--tRNA ligase;protein_id=HJH9162889.1;transl_table=11 DALFDJ020000005.1 tpg gene 150493 151059 . + . ID=gene-O5D79_001360;Name=O5D79_001360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001360 DALFDJ020000005.1 Protein Homology CDS 150493 151059 . + 0 ID=cds-HJH9162890.1;Parent=gene-O5D79_001360;Dbxref=NCBI_GP:HJH9162890.1;Name=HJH9162890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460859.1;locus_tag=O5D79_001360;product=hydrolase;protein_id=HJH9162890.1;transl_table=11 DALFDJ020000005.1 tpg gene 151056 151874 . + . ID=gene-O5D79_001361;Name=O5D79_001361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001361 DALFDJ020000005.1 Protein Homology CDS 151056 151874 . + 0 ID=cds-HJH9162891.1;Parent=gene-O5D79_001361;Dbxref=NCBI_GP:HJH9162891.1;Name=HJH9162891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460860.1;locus_tag=O5D79_001361;product=DUF72 domain-containing protein;protein_id=HJH9162891.1;transl_table=11 DALFDJ020000005.1 tpg gene 151927 152322 . + . ID=gene-O5D79_001362;Name=O5D79_001362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001362 DALFDJ020000005.1 Protein Homology CDS 151927 152322 . + 0 ID=cds-HJH9162892.1;Parent=gene-O5D79_001362;Dbxref=NCBI_GP:HJH9162892.1;Name=HJH9162892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460861.1;locus_tag=O5D79_001362;product=MAPEG family protein;protein_id=HJH9162892.1;transl_table=11 DALFDJ020000005.1 tpg gene 152363 153106 . + . ID=gene-O5D79_001363;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=O5D79_001363 DALFDJ020000005.1 Protein Homology CDS 152363 153106 . + 0 ID=cds-HJH9162893.1;Parent=gene-O5D79_001363;Dbxref=NCBI_GP:HJH9162893.1;Name=HJH9162893.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460862.1;locus_tag=O5D79_001363;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=HJH9162893.1;transl_table=11 DALFDJ020000005.1 tpg gene 153103 154074 . + . ID=gene-O5D79_001364;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=O5D79_001364 DALFDJ020000005.1 Protein Homology CDS 153103 154074 . + 0 ID=cds-HJH9162894.1;Parent=gene-O5D79_001364;Dbxref=NCBI_GP:HJH9162894.1;Name=HJH9162894.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460863.1;locus_tag=O5D79_001364;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=HJH9162894.1;transl_table=11 DALFDJ020000005.1 tpg gene 154310 155056 . - . ID=gene-O5D79_001365;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=O5D79_001365 DALFDJ020000005.1 Protein Homology CDS 154310 155056 . - 0 ID=cds-HJH9162895.1;Parent=gene-O5D79_001365;Dbxref=NCBI_GP:HJH9162895.1;Name=HJH9162895.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460864.1;locus_tag=O5D79_001365;product=copper homeostasis protein CutC;protein_id=HJH9162895.1;transl_table=11 DALFDJ020000005.1 tpg gene 155076 155645 . - . ID=gene-O5D79_001366;Name=O5D79_001366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001366 DALFDJ020000005.1 Protein Homology CDS 155076 155645 . - 0 ID=cds-HJH9162896.1;Parent=gene-O5D79_001366;Dbxref=NCBI_GP:HJH9162896.1;Name=HJH9162896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460865.1;locus_tag=O5D79_001366;product=VOC family protein;protein_id=HJH9162896.1;transl_table=11 DALFDJ020000005.1 tpg gene 155882 157615 . + . ID=gene-O5D79_001367;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=O5D79_001367 DALFDJ020000005.1 Protein Homology CDS 155882 157615 . + 0 ID=cds-HJH9162897.1;Parent=gene-O5D79_001367;Dbxref=NCBI_GP:HJH9162897.1;Name=HJH9162897.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=O5D79_001367;product=arginine--tRNA ligase;protein_id=HJH9162897.1;transl_table=11 DALFDJ020000005.1 tpg gene 157804 159675 . + . ID=gene-O5D79_001368;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=O5D79_001368 DALFDJ020000005.1 Protein Homology CDS 157804 159675 . + 0 ID=cds-HJH9162898.1;Parent=gene-O5D79_001368;Dbxref=NCBI_GP:HJH9162898.1;Name=HJH9162898.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460867.1;locus_tag=O5D79_001368;product=penicillin-binding protein 2;protein_id=HJH9162898.1;transl_table=11 DALFDJ020000005.1 tpg gene 159729 160868 . - . ID=gene-O5D79_001369;Name=O5D79_001369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001369 DALFDJ020000005.1 Protein Homology CDS 159729 160868 . - 0 ID=cds-HJH9162899.1;Parent=gene-O5D79_001369;Dbxref=NCBI_GP:HJH9162899.1;Name=HJH9162899.1;Ontology_term=GO:0005975,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=O5D79_001369;product=glycoside hydrolase family 88/105 protein;protein_id=HJH9162899.1;transl_table=11 DALFDJ020000005.1 tpg gene 161105 161497 . - . ID=gene-O5D79_001370;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=O5D79_001370 DALFDJ020000005.1 Protein Homology CDS 161105 161497 . - 0 ID=cds-HJH9162900.1;Parent=gene-O5D79_001370;Dbxref=NCBI_GP:HJH9162900.1;Name=HJH9162900.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460869.1;locus_tag=O5D79_001370;product=flagellar protein FlhE;protein_id=HJH9162900.1;transl_table=11 DALFDJ020000005.1 tpg gene 161497 163575 . - . ID=gene-O5D79_001371;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=O5D79_001371 DALFDJ020000005.1 Protein Homology CDS 161497 163575 . - 0 ID=cds-HJH9162901.1;Parent=gene-O5D79_001371;Dbxref=NCBI_GP:HJH9162901.1;Name=HJH9162901.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460870.1;locus_tag=O5D79_001371;product=flagellar biosynthesis protein FlhA;protein_id=HJH9162901.1;transl_table=11 DALFDJ020000005.1 tpg gene 163568 164719 . - . ID=gene-O5D79_001372;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=O5D79_001372 DALFDJ020000005.1 Protein Homology CDS 163568 164719 . - 0 ID=cds-HJH9162902.1;Parent=gene-O5D79_001372;Dbxref=NCBI_GP:HJH9162902.1;Name=HJH9162902.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=O5D79_001372;product=flagellar biosynthesis protein FlhB;protein_id=HJH9162902.1;transl_table=11 DALFDJ020000005.1 tpg gene 164913 165557 . - . ID=gene-O5D79_001373;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=O5D79_001373 DALFDJ020000005.1 Protein Homology CDS 164913 165557 . - 0 ID=cds-HJH9162903.1;Parent=gene-O5D79_001373;Dbxref=NCBI_GP:HJH9162903.1;Name=HJH9162903.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=O5D79_001373;product=protein phosphatase CheZ;protein_id=HJH9162903.1;transl_table=11 DALFDJ020000005.1 tpg gene 165568 165957 . - . ID=gene-O5D79_001374;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=O5D79_001374 DALFDJ020000005.1 Protein Homology CDS 165568 165957 . - 0 ID=cds-HJH9162904.1;Parent=gene-O5D79_001374;Dbxref=NCBI_GP:HJH9162904.1;Name=HJH9162904.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=O5D79_001374;product=chemotaxis response regulator CheY;protein_id=HJH9162904.1;transl_table=11 DALFDJ020000005.1 tpg gene 165975 167024 . - . ID=gene-O5D79_001375;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=O5D79_001375 DALFDJ020000005.1 Protein Homology CDS 165975 167024 . - 0 ID=cds-HJH9162905.1;Parent=gene-O5D79_001375;Dbxref=NCBI_GP:HJH9162905.1;Name=HJH9162905.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=O5D79_001375;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=HJH9162905.1;transl_table=11 DALFDJ020000005.1 tpg gene 167021 167887 . - . ID=gene-O5D79_001376;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=O5D79_001376 DALFDJ020000005.1 Protein Homology CDS 167021 167887 . - 0 ID=cds-HJH9162906.1;Parent=gene-O5D79_001376;Dbxref=NCBI_GP:HJH9162906.1;Name=HJH9162906.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460875.1;locus_tag=O5D79_001376;product=protein-glutamate O-methyltransferase CheR;protein_id=HJH9162906.1;transl_table=11 DALFDJ020000005.1 tpg gene 168041 169702 . - . ID=gene-O5D79_001377;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=O5D79_001377 DALFDJ020000005.1 Protein Homology CDS 168041 169702 . - 0 ID=cds-HJH9162907.1;Parent=gene-O5D79_001377;Dbxref=NCBI_GP:HJH9162907.1;Name=HJH9162907.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460876.1;locus_tag=O5D79_001377;product=methyl-accepting chemotaxis protein II;protein_id=HJH9162907.1;transl_table=11 DALFDJ020000005.1 tpg gene 169939 170442 . - . ID=gene-O5D79_001378;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=O5D79_001378 DALFDJ020000005.1 Protein Homology CDS 169939 170442 . - 0 ID=cds-HJH9162908.1;Parent=gene-O5D79_001378;Dbxref=NCBI_GP:HJH9162908.1;Name=HJH9162908.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=O5D79_001378;product=chemotaxis protein CheW;protein_id=HJH9162908.1;transl_table=11 DALFDJ020000005.1 tpg gene 170463 172478 . - . ID=gene-O5D79_001379;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=O5D79_001379 DALFDJ020000005.1 Protein Homology CDS 170463 172478 . - 0 ID=cds-HJH9162909.1;Parent=gene-O5D79_001379;Dbxref=NCBI_GP:HJH9162909.1;Name=HJH9162909.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460878.1;locus_tag=O5D79_001379;product=chemotaxis protein CheA;protein_id=HJH9162909.1;transl_table=11 DALFDJ020000005.1 tpg gene 172483 173412 . - . ID=gene-O5D79_001380;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=O5D79_001380 DALFDJ020000005.1 Protein Homology CDS 172483 173412 . - 0 ID=cds-HJH9162910.1;Parent=gene-O5D79_001380;Dbxref=NCBI_GP:HJH9162910.1;Name=HJH9162910.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=O5D79_001380;product=flagellar motor protein MotB;protein_id=HJH9162910.1;transl_table=11 DALFDJ020000005.1 tpg gene 173409 174296 . - . ID=gene-O5D79_001381;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=O5D79_001381 DALFDJ020000005.1 Protein Homology CDS 173409 174296 . - 0 ID=cds-HJH9162911.1;Parent=gene-O5D79_001381;Dbxref=NCBI_GP:HJH9162911.1;Name=HJH9162911.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=O5D79_001381;product=flagellar motor stator protein MotA;protein_id=HJH9162911.1;transl_table=11 DALFDJ020000005.1 tpg gene 174421 175005 . - . ID=gene-O5D79_001382;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=O5D79_001382 DALFDJ020000005.1 Protein Homology CDS 174421 175005 . - 0 ID=cds-HJH9162912.1;Parent=gene-O5D79_001382;Dbxref=NCBI_GP:HJH9162912.1;Name=HJH9162912.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460881.3;locus_tag=O5D79_001382;product=flagellar transcriptional regulator FlhC;protein_id=HJH9162912.1;transl_table=11 DALFDJ020000005.1 tpg gene 175002 175343 . - . ID=gene-O5D79_001383;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=O5D79_001383 DALFDJ020000005.1 Protein Homology CDS 175002 175343 . - 0 ID=cds-HJH9162913.1;Parent=gene-O5D79_001383;Dbxref=NCBI_GP:HJH9162913.1;Name=HJH9162913.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310629.2;locus_tag=O5D79_001383;product=flagellar transcriptional regulator FlhD;protein_id=HJH9162913.1;transl_table=11 DALFDJ020000005.1 tpg gene 176026 176142 . + . ID=gene-O5D79_001384;Name=O5D79_001384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001384 DALFDJ020000005.1 Protein Homology CDS 176026 176142 . + 0 ID=cds-HJH9162914.1;Parent=gene-O5D79_001384;Dbxref=NCBI_GP:HJH9162914.1;Name=HJH9162914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448342.1;locus_tag=O5D79_001384;product=hypothetical protein;protein_id=HJH9162914.1;transl_table=11 DALFDJ020000005.1 tpg gene 176139 176567 . + . ID=gene-O5D79_001385;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=O5D79_001385 DALFDJ020000005.1 Protein Homology CDS 176139 176567 . + 0 ID=cds-HJH9162915.1;Parent=gene-O5D79_001385;Dbxref=NCBI_GP:HJH9162915.1;Name=HJH9162915.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460884.1;locus_tag=O5D79_001385;product=universal stress protein UspC;protein_id=HJH9162915.1;transl_table=11 DALFDJ020000005.1 tpg gene 176585 178006 . - . ID=gene-O5D79_001386;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=O5D79_001386 DALFDJ020000005.1 Protein Homology CDS 176585 178006 . - 0 ID=cds-HJH9162916.1;Parent=gene-O5D79_001386;Dbxref=NCBI_GP:HJH9162916.1;Name=HJH9162916.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460885.1;locus_tag=O5D79_001386;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=HJH9162916.1;transl_table=11 DALFDJ020000005.1 tpg gene 177981 178784 . - . ID=gene-O5D79_001387;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=O5D79_001387 DALFDJ020000005.1 Protein Homology CDS 177981 178784 . - 0 ID=cds-HJH9162917.1;Parent=gene-O5D79_001387;Dbxref=NCBI_GP:HJH9162917.1;Name=HJH9162917.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460886.1;locus_tag=O5D79_001387;product=trehalose-phosphatase;protein_id=HJH9162917.1;transl_table=11 DALFDJ020000005.1 tpg pseudogene 179007 179189 . - . ID=gene-O5D79_001388;Name=araH;gbkey=Gene;gene=araH;gene_biotype=pseudogene;locus_tag=O5D79_001388;pseudo=true DALFDJ020000005.1 Protein Homology CDS 179007 179189 . - 0 ID=cds-O5D79_001388;Parent=gene-O5D79_001388;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026162.2;locus_tag=O5D79_001388;product=L-arabinose ABC transporter permease AraH;pseudo=true;transl_table=11 DALFDJ020000005.1 tpg gene 179301 179858 . - . ID=gene-O5D79_001389;Name=O5D79_001389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001389 DALFDJ020000005.1 Protein Homology CDS 179301 179858 . - 0 ID=cds-HJH9162918.1;Parent=gene-O5D79_001389;Dbxref=NCBI_GP:HJH9162918.1;Name=HJH9162918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=O5D79_001389;product=DJ-1/PfpI family protein;protein_id=HJH9162918.1;transl_table=11 DALFDJ020000005.1 tpg gene 180409 180912 . + . ID=gene-O5D79_001390;Name=O5D79_001390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001390 DALFDJ020000005.1 Protein Homology CDS 180409 180912 . + 0 ID=cds-HJH9162919.1;Parent=gene-O5D79_001390;Dbxref=NCBI_GP:HJH9162919.1;Name=HJH9162919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460888.1;locus_tag=O5D79_001390;product=non-heme ferritin-like protein;protein_id=HJH9162919.1;transl_table=11 DALFDJ020000005.1 tpg gene 181091 181729 . - . ID=gene-O5D79_001391;Name=O5D79_001391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001391 DALFDJ020000005.1 Protein Homology CDS 181091 181729 . - 0 ID=cds-HJH9162920.1;Parent=gene-O5D79_001391;Dbxref=NCBI_GP:HJH9162920.1;Name=HJH9162920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000684811.1;locus_tag=O5D79_001391;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=HJH9162920.1;transl_table=11 DALFDJ020000005.1 tpg gene 181985 182320 . + . ID=gene-O5D79_001392;Name=O5D79_001392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001392 DALFDJ020000005.1 Protein Homology CDS 181985 182320 . + 0 ID=cds-HJH9162921.1;Parent=gene-O5D79_001392;Dbxref=NCBI_GP:HJH9162921.1;Name=HJH9162921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460890.1;locus_tag=O5D79_001392;product=YecR-like lipofamily protein;protein_id=HJH9162921.1;transl_table=11 DALFDJ020000005.1 tpg gene 182560 183057 . + . ID=gene-O5D79_001393;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=O5D79_001393 DALFDJ020000005.1 Protein Homology CDS 182560 183057 . + 0 ID=cds-HJH9162922.1;Parent=gene-O5D79_001393;Dbxref=NCBI_GP:HJH9162922.1;Name=HJH9162922.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=O5D79_001393;product=non-heme ferritin;protein_id=HJH9162922.1;transl_table=11 DALFDJ020000005.1 tpg gene 183103 183342 . - . ID=gene-O5D79_001394;Name=O5D79_001394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001394 DALFDJ020000005.1 Protein Homology CDS 183103 183342 . - 0 ID=cds-HJH9162923.1;Parent=gene-O5D79_001394;Dbxref=NCBI_GP:HJH9162923.1;Name=HJH9162923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460892.1;locus_tag=O5D79_001394;product=YecH family metal-binding protein;protein_id=HJH9162923.1;transl_table=11 DALFDJ020000005.1 tpg gene 183569 184780 . + . ID=gene-O5D79_001395;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=O5D79_001395 DALFDJ020000005.1 Protein Homology CDS 183569 184780 . + 0 ID=cds-HJH9162924.1;Parent=gene-O5D79_001395;Dbxref=NCBI_GP:HJH9162924.1;Name=HJH9162924.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460893.1;locus_tag=O5D79_001395;product=tyrosine transporter TyrP;protein_id=HJH9162924.1;transl_table=11 DALFDJ020000005.1 tpg gene 184855 185520 . - . ID=gene-O5D79_001396;Name=O5D79_001396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001396 DALFDJ020000005.1 Protein Homology CDS 184855 185520 . - 0 ID=cds-HJH9162925.1;Parent=gene-O5D79_001396;Dbxref=NCBI_GP:HJH9162925.1;Name=HJH9162925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460894.1;locus_tag=O5D79_001396;product=YecA family protein;protein_id=HJH9162925.1;transl_table=11 DALFDJ020000005.1 tpg gene 185759 186085 . - . ID=gene-O5D79_001397;Name=O5D79_001397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001397 DALFDJ020000005.1 Protein Homology CDS 185759 186085 . - 0 ID=cds-HJH9162926.1;Parent=gene-O5D79_001397;Dbxref=NCBI_GP:HJH9162926.1;Name=HJH9162926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460895.1;locus_tag=O5D79_001397;product=glucose-6-phosphate dehydrogenase;protein_id=HJH9162926.1;transl_table=11 DALFDJ020000005.1 tpg gene 186298 187737 . - . ID=gene-O5D79_001398;Name=O5D79_001398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001398 DALFDJ020000005.1 Protein Homology CDS 186298 187737 . - 0 ID=cds-HJH9162927.1;Parent=gene-O5D79_001398;Dbxref=NCBI_GP:HJH9162927.1;Name=HJH9162927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460896.1;locus_tag=O5D79_001398;product=SH3 domain-containing protein;protein_id=HJH9162927.1;transl_table=11 DALFDJ020000005.1 tpg gene 187951 188283 . - . ID=gene-O5D79_001399;Name=O5D79_001399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001399 DALFDJ020000005.1 Protein Homology CDS 187951 188283 . - 0 ID=cds-HJH9162928.1;Parent=gene-O5D79_001399;Dbxref=NCBI_GP:HJH9162928.1;Name=HJH9162928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460897.1;locus_tag=O5D79_001399;product=hypothetical protein;protein_id=HJH9162928.1;transl_table=11 DALFDJ020000005.1 tpg gene 188533 188619 . - . ID=gene-O5D79_001400;Name=O5D79_001400;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_001400 DALFDJ020000005.1 tRNAscan-SE tRNA 188533 188619 . - . ID=rna-O5D79_001400;Parent=gene-O5D79_001400;anticodon=(pos:complement(188583..188585));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001400;product=tRNA-Leu DALFDJ020000005.1 tRNAscan-SE exon 188533 188619 . - . ID=exon-O5D79_001400-1;Parent=rna-O5D79_001400;anticodon=(pos:complement(188583..188585));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001400;product=tRNA-Leu DALFDJ020000005.1 tpg gene 188631 188704 . - . ID=gene-O5D79_001401;Name=O5D79_001401;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_001401 DALFDJ020000005.1 tRNAscan-SE tRNA 188631 188704 . - . ID=rna-O5D79_001401;Parent=gene-O5D79_001401;anticodon=(pos:complement(188670..188672));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001401;product=tRNA-Cys DALFDJ020000005.1 tRNAscan-SE exon 188631 188704 . - . ID=exon-O5D79_001401-1;Parent=rna-O5D79_001401;anticodon=(pos:complement(188670..188672));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001401;product=tRNA-Cys DALFDJ020000005.1 tpg gene 188757 188832 . - . ID=gene-O5D79_001402;Name=O5D79_001402;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_001402 DALFDJ020000005.1 tRNAscan-SE tRNA 188757 188832 . - . ID=rna-O5D79_001402;Parent=gene-O5D79_001402;anticodon=(pos:complement(188797..188799));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001402;product=tRNA-Gly DALFDJ020000005.1 tRNAscan-SE exon 188757 188832 . - . ID=exon-O5D79_001402-1;Parent=rna-O5D79_001402;anticodon=(pos:complement(188797..188799));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001402;product=tRNA-Gly DALFDJ020000005.1 tpg gene 188984 189532 . - . ID=gene-O5D79_001403;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=O5D79_001403 DALFDJ020000005.1 Protein Homology CDS 188984 189532 . - 0 ID=cds-HJH9162929.1;Parent=gene-O5D79_001403;Dbxref=NCBI_GP:HJH9162929.1;Name=HJH9162929.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460898.1;locus_tag=O5D79_001403;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=HJH9162929.1;transl_table=11 DALFDJ020000005.1 tpg gene 189589 191421 . - . ID=gene-O5D79_001404;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=O5D79_001404 DALFDJ020000005.1 Protein Homology CDS 189589 191421 . - 0 ID=cds-HJH9162930.1;Parent=gene-O5D79_001404;Dbxref=NCBI_GP:HJH9162930.1;Name=HJH9162930.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460899.1;locus_tag=O5D79_001404;product=excinuclease ABC subunit UvrC;protein_id=HJH9162930.1;transl_table=11 DALFDJ020000005.1 tpg gene 191418 192074 . - . ID=gene-O5D79_001405;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=O5D79_001405 DALFDJ020000005.1 Protein Homology CDS 191418 192074 . - 0 ID=cds-HJH9162931.1;Parent=gene-O5D79_001405;Dbxref=NCBI_GP:HJH9162931.1;Name=HJH9162931.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460900.1;locus_tag=O5D79_001405;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=HJH9162931.1;transl_table=11 DALFDJ020000005.1 tpg gene 192386 192541 . + . ID=gene-O5D79_001406;Name=O5D79_001406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001406 DALFDJ020000005.1 Protein Homology CDS 192386 192541 . + 0 ID=cds-HJH9162932.1;Parent=gene-O5D79_001406;Dbxref=NCBI_GP:HJH9162932.1;Name=HJH9162932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448360.1;locus_tag=O5D79_001406;product=hypothetical protein;protein_id=HJH9162932.1;transl_table=11 DALFDJ020000005.1 tpg gene 192538 192762 . + . ID=gene-O5D79_001407;Name=O5D79_001407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001407 DALFDJ020000005.1 Protein Homology CDS 192538 192762 . + 0 ID=cds-HJH9162933.1;Parent=gene-O5D79_001407;Dbxref=NCBI_GP:HJH9162933.1;Name=HJH9162933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460902.1;locus_tag=O5D79_001407;product=DUF2594 family protein;protein_id=HJH9162933.1;transl_table=11 DALFDJ020000005.1 tpg gene 192829 193551 . - . ID=gene-O5D79_001408;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=O5D79_001408 DALFDJ020000005.1 Protein Homology CDS 192829 193551 . - 0 ID=cds-HJH9162934.1;Parent=gene-O5D79_001408;Dbxref=NCBI_GP:HJH9162934.1;Name=HJH9162934.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460903.1;locus_tag=O5D79_001408;product=transcriptional regulator SdiA;protein_id=HJH9162934.1;transl_table=11 DALFDJ020000005.1 tpg gene 193783 194535 . - . ID=gene-O5D79_001409;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=O5D79_001409 DALFDJ020000005.1 Protein Homology CDS 193783 194535 . - 0 ID=cds-HJH9162935.1;Parent=gene-O5D79_001409;Dbxref=NCBI_GP:HJH9162935.1;Name=HJH9162935.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460904.1;locus_tag=O5D79_001409;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=HJH9162935.1;transl_table=11 DALFDJ020000005.1 tpg gene 194532 195200 . - . ID=gene-O5D79_001410;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=O5D79_001410 DALFDJ020000005.1 Protein Homology CDS 194532 195200 . - 0 ID=cds-HJH9162936.1;Parent=gene-O5D79_001410;Dbxref=NCBI_GP:HJH9162936.1;Name=HJH9162936.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460905.1;locus_tag=O5D79_001410;product=cystine ABC transporter permease;protein_id=HJH9162936.1;transl_table=11 DALFDJ020000005.1 tpg gene 195221 196207 . - . ID=gene-O5D79_001411;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=O5D79_001411 DALFDJ020000005.1 Protein Homology CDS 195221 196207 . - 0 ID=cds-HJH9162937.1;Parent=gene-O5D79_001411;Dbxref=NCBI_GP:HJH9162937.1;Name=HJH9162937.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460906.1;locus_tag=O5D79_001411;product=D-cysteine desulfhydrase;protein_id=HJH9162937.1;transl_table=11 DALFDJ020000005.1 tpg gene 196361 197161 . - . ID=gene-O5D79_001412;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=O5D79_001412 DALFDJ020000005.1 Protein Homology CDS 196361 197161 . - 0 ID=cds-HJH9162938.1;Parent=gene-O5D79_001412;Dbxref=NCBI_GP:HJH9162938.1;Name=HJH9162938.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460907.1;locus_tag=O5D79_001412;product=cystine ABC transporter substrate-binding protein;protein_id=HJH9162938.1;transl_table=11 DALFDJ020000005.1 tpg gene 197308 197859 . - . ID=gene-O5D79_001413;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=O5D79_001413 DALFDJ020000005.1 Protein Homology CDS 197308 197859 . - 0 ID=cds-HJH9162939.1;Parent=gene-O5D79_001413;Dbxref=NCBI_GP:HJH9162939.1;Name=HJH9162939.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460908.1;locus_tag=O5D79_001413;product=flagella biosynthesis regulatory protein FliZ;protein_id=HJH9162939.1;transl_table=11 DALFDJ020000005.1 tpg gene 197918 198637 . - . ID=gene-O5D79_001414;Name=O5D79_001414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001414 DALFDJ020000005.1 Protein Homology CDS 197918 198637 . - 0 ID=cds-HJH9162940.1;Parent=gene-O5D79_001414;Dbxref=NCBI_GP:HJH9162940.1;Name=HJH9162940.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460909.1;locus_tag=O5D79_001414;product=RNA polymerase sigma factor FliA;protein_id=HJH9162940.1;transl_table=11 DALFDJ020000005.1 tpg gene 198834 200039 . - . ID=gene-O5D79_001415;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=protein_coding;locus_tag=O5D79_001415 DALFDJ020000005.1 Protein Homology CDS 198834 200039 . - 0 ID=cds-HJH9162941.1;Parent=gene-O5D79_001415;Dbxref=NCBI_GP:HJH9162941.1;Name=HJH9162941.1;gbkey=CDS;gene=fliB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460911.1;locus_tag=O5D79_001415;product=flagellin lysine-N-methylase;protein_id=HJH9162941.1;transl_table=11 DALFDJ020000005.1 tpg gene 200118 201638 . - . ID=gene-O5D79_001416;Name=O5D79_001416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001416 DALFDJ020000005.1 Protein Homology CDS 200118 201638 . - 0 ID=cds-HJH9162942.1;Parent=gene-O5D79_001416;Dbxref=NCBI_GP:HJH9162942.1;Name=HJH9162942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461698.1;locus_tag=O5D79_001416;product=FliC/FljB family flagellin;protein_id=HJH9162942.1;transl_table=11 DALFDJ020000005.1 tpg gene 201895 203298 . + . ID=gene-O5D79_001417;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=O5D79_001417 DALFDJ020000005.1 Protein Homology CDS 201895 203298 . + 0 ID=cds-HJH9162943.1;Parent=gene-O5D79_001417;Dbxref=NCBI_GP:HJH9162943.1;Name=HJH9162943.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460913.1;locus_tag=O5D79_001417;product=flagellar filament capping protein FliD;protein_id=HJH9162943.1;transl_table=11 DALFDJ020000005.1 tpg gene 203313 203720 . + . ID=gene-O5D79_001418;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=O5D79_001418 DALFDJ020000005.1 Protein Homology CDS 203313 203720 . + 0 ID=cds-HJH9162944.1;Parent=gene-O5D79_001418;Dbxref=NCBI_GP:HJH9162944.1;Name=HJH9162944.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460914.1;locus_tag=O5D79_001418;product=flagellar export chaperone FliS;protein_id=HJH9162944.1;transl_table=11 DALFDJ020000005.1 tpg gene 203720 204088 . + . ID=gene-O5D79_001419;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=O5D79_001419 DALFDJ020000005.1 Protein Homology CDS 203720 204088 . + 0 ID=cds-HJH9162945.1;Parent=gene-O5D79_001419;Dbxref=NCBI_GP:HJH9162945.1;Name=HJH9162945.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460915.1;locus_tag=O5D79_001419;product=flagella biosynthesis regulatory protein FliT;protein_id=HJH9162945.1;transl_table=11 DALFDJ020000005.1 tpg gene 204160 205644 . + . ID=gene-O5D79_001420;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=O5D79_001420 DALFDJ020000005.1 Protein Homology CDS 204160 205644 . + 0 ID=cds-HJH9162946.1;Parent=gene-O5D79_001420;Dbxref=NCBI_GP:HJH9162946.1;Name=HJH9162946.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460916.1;locus_tag=O5D79_001420;product=alpha-amylase;protein_id=HJH9162946.1;transl_table=11 DALFDJ020000005.1 tpg gene 205684 206097 . - . ID=gene-O5D79_001421;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=O5D79_001421 DALFDJ020000005.1 Protein Homology CDS 205684 206097 . - 0 ID=cds-HJH9162947.1;Parent=gene-O5D79_001421;Dbxref=NCBI_GP:HJH9162947.1;Name=HJH9162947.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754699.1;locus_tag=O5D79_001421;product=lipoprotein YedD;protein_id=HJH9162947.1;transl_table=11 DALFDJ020000005.1 tpg gene 206283 207488 . + . ID=gene-O5D79_001422;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=O5D79_001422 DALFDJ020000005.1 Protein Homology CDS 206283 207488 . + 0 ID=cds-HJH9162948.1;Parent=gene-O5D79_001422;Dbxref=NCBI_GP:HJH9162948.1;Name=HJH9162948.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156840.1;locus_tag=O5D79_001422;product=selenium metabolism membrane protein YedE/FdhT;protein_id=HJH9162948.1;transl_table=11 DALFDJ020000005.1 tpg gene 207485 207718 . + . ID=gene-O5D79_001423;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=O5D79_001423 DALFDJ020000005.1 Protein Homology CDS 207485 207718 . + 0 ID=cds-HJH9162949.1;Parent=gene-O5D79_001423;Dbxref=NCBI_GP:HJH9162949.1;Name=HJH9162949.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=O5D79_001423;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=HJH9162949.1;transl_table=11 DALFDJ020000005.1 tpg gene 207983 208369 . + . ID=gene-O5D79_001424;Name=O5D79_001424;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001424 DALFDJ020000005.1 Protein Homology CDS 207983 208369 . + 0 ID=cds-HJH9162950.1;Parent=gene-O5D79_001424;Dbxref=NCBI_GP:HJH9162950.1;Name=HJH9162950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448379.1;locus_tag=O5D79_001424;product=hypothetical protein;protein_id=HJH9162950.1;transl_table=11 DALFDJ020000005.1 tpg gene 208490 208804 . - . ID=gene-O5D79_001425;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=O5D79_001425 DALFDJ020000005.1 Protein Homology CDS 208490 208804 . - 0 ID=cds-HJH9162951.1;Parent=gene-O5D79_001425;Dbxref=NCBI_GP:HJH9162951.1;Name=HJH9162951.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460921.1;locus_tag=O5D79_001425;product=flagellar hook-basal body complex protein FliE;protein_id=HJH9162951.1;transl_table=11 DALFDJ020000005.1 tpg gene 209021 210703 . + . ID=gene-O5D79_001426;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=O5D79_001426 DALFDJ020000005.1 Protein Homology CDS 209021 210703 . + 0 ID=cds-HJH9162952.1;Parent=gene-O5D79_001426;Dbxref=NCBI_GP:HJH9162952.1;Name=HJH9162952.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=O5D79_001426;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=HJH9162952.1;transl_table=11 DALFDJ020000005.1 tpg gene 210696 211691 . + . ID=gene-O5D79_001427;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=O5D79_001427 DALFDJ020000005.1 Protein Homology CDS 210696 211691 . + 0 ID=cds-HJH9162953.1;Parent=gene-O5D79_001427;Dbxref=NCBI_GP:HJH9162953.1;Name=HJH9162953.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460923.1;locus_tag=O5D79_001427;product=flagellar motor switch protein FliG;protein_id=HJH9162953.1;transl_table=11 DALFDJ020000005.1 tpg gene 211684 212391 . + . ID=gene-O5D79_001428;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=O5D79_001428 DALFDJ020000005.1 Protein Homology CDS 211684 212391 . + 0 ID=cds-HJH9162954.1;Parent=gene-O5D79_001428;Dbxref=NCBI_GP:HJH9162954.1;Name=HJH9162954.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460924.1;locus_tag=O5D79_001428;product=flagellar assembly protein FliH;protein_id=HJH9162954.1;transl_table=11 DALFDJ020000005.1 tpg gene 212391 213761 . + . ID=gene-O5D79_001429;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=O5D79_001429 DALFDJ020000005.1 Protein Homology CDS 212391 213761 . + 0 ID=cds-HJH9162955.1;Parent=gene-O5D79_001429;Dbxref=NCBI_GP:HJH9162955.1;Name=HJH9162955.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460925.1;locus_tag=O5D79_001429;product=flagellar protein export ATPase FliI;protein_id=HJH9162955.1;transl_table=11 DALFDJ020000005.1 tpg gene 213783 214226 . + . ID=gene-O5D79_001430;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=O5D79_001430 DALFDJ020000005.1 Protein Homology CDS 213783 214226 . + 0 ID=cds-HJH9162956.1;Parent=gene-O5D79_001430;Dbxref=NCBI_GP:HJH9162956.1;Name=HJH9162956.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460926.1;locus_tag=O5D79_001430;product=flagellar export protein FliJ;protein_id=HJH9162956.1;transl_table=11 DALFDJ020000005.1 tpg gene 214223 215446 . + . ID=gene-O5D79_001431;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=O5D79_001431 DALFDJ020000005.1 Protein Homology CDS 214223 215446 . + 0 ID=cds-HJH9162957.1;Parent=gene-O5D79_001431;Dbxref=NCBI_GP:HJH9162957.1;Name=HJH9162957.1;Ontology_term=GO:0044780,GO:0009424;gbkey=CDS;gene=fliK;go_component=bacterial-type flagellum hook|0009424||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460927.1;locus_tag=O5D79_001431;product=flagellar hook length control protein FliK;protein_id=HJH9162957.1;transl_table=11 DALFDJ020000005.1 tpg gene 215551 216018 . + . ID=gene-O5D79_001432;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=O5D79_001432 DALFDJ020000005.1 Protein Homology CDS 215551 216018 . + 0 ID=cds-HJH9162958.1;Parent=gene-O5D79_001432;Dbxref=NCBI_GP:HJH9162958.1;Name=HJH9162958.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=O5D79_001432;product=flagellar basal body-associated protein FliL;protein_id=HJH9162958.1;transl_table=11 DALFDJ020000005.1 tpg gene 216023 217027 . + . ID=gene-O5D79_001433;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=O5D79_001433 DALFDJ020000005.1 Protein Homology CDS 216023 217027 . + 0 ID=cds-HJH9162959.1;Parent=gene-O5D79_001433;Dbxref=NCBI_GP:HJH9162959.1;Name=HJH9162959.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=O5D79_001433;product=flagellar motor switch protein FliM;protein_id=HJH9162959.1;transl_table=11 DALFDJ020000005.1 tpg gene 217024 217437 . + . ID=gene-O5D79_001434;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=O5D79_001434 DALFDJ020000005.1 Protein Homology CDS 217024 217437 . + 0 ID=cds-HJH9162960.1;Parent=gene-O5D79_001434;Dbxref=NCBI_GP:HJH9162960.1;Name=HJH9162960.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460930.1;locus_tag=O5D79_001434;product=flagellar motor switch protein FliN;protein_id=HJH9162960.1;transl_table=11 DALFDJ020000005.1 tpg gene 217437 217814 . + . ID=gene-O5D79_001435;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=O5D79_001435 DALFDJ020000005.1 Protein Homology CDS 217437 217814 . + 0 ID=cds-HJH9162961.1;Parent=gene-O5D79_001435;Dbxref=NCBI_GP:HJH9162961.1;Name=HJH9162961.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460931.3;locus_tag=O5D79_001435;product=flagellar biosynthetic protein FliO;protein_id=HJH9162961.1;transl_table=11 DALFDJ020000005.1 tpg gene 217814 218551 . + . ID=gene-O5D79_001436;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=O5D79_001436 DALFDJ020000005.1 Protein Homology CDS 217814 218551 . + 0 ID=cds-HJH9162962.1;Parent=gene-O5D79_001436;Dbxref=NCBI_GP:HJH9162962.1;Name=HJH9162962.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460932.1;locus_tag=O5D79_001436;product=flagellar type III secretion system pore protein FliP;protein_id=HJH9162962.1;transl_table=11 DALFDJ020000005.1 tpg gene 218561 218830 . + . ID=gene-O5D79_001437;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=O5D79_001437 DALFDJ020000005.1 Protein Homology CDS 218561 218830 . + 0 ID=cds-HJH9162963.1;Parent=gene-O5D79_001437;Dbxref=NCBI_GP:HJH9162963.1;Name=HJH9162963.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=O5D79_001437;product=flagellar biosynthesis protein FliQ;protein_id=HJH9162963.1;transl_table=11 DALFDJ020000005.1 tpg gene 218839 219633 . + . ID=gene-O5D79_001438;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=O5D79_001438 DALFDJ020000005.1 Protein Homology CDS 218839 219633 . + 0 ID=cds-HJH9162964.1;Parent=gene-O5D79_001438;Dbxref=NCBI_GP:HJH9162964.1;Name=HJH9162964.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=O5D79_001438;product=flagellar biosynthetic protein FliR;protein_id=HJH9162964.1;transl_table=11 DALFDJ020000005.1 tpg gene 219915 220538 . + . ID=gene-O5D79_001439;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=O5D79_001439 DALFDJ020000005.1 Protein Homology CDS 219915 220538 . + 0 ID=cds-HJH9162965.1;Parent=gene-O5D79_001439;Dbxref=NCBI_GP:HJH9162965.1;Name=HJH9162965.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460935.1;locus_tag=O5D79_001439;product=transcriptional regulator RcsA;protein_id=HJH9162965.1;transl_table=11 DALFDJ020000005.1 tpg gene 220577 220771 . - . ID=gene-O5D79_001440;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=O5D79_001440 DALFDJ020000005.1 Protein Homology CDS 220577 220771 . - 0 ID=cds-HJH9162966.1;Parent=gene-O5D79_001440;Dbxref=NCBI_GP:HJH9162966.1;Name=HJH9162966.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736680.1;locus_tag=O5D79_001440;product=protein DsrB;protein_id=HJH9162966.1;transl_table=11 DALFDJ020000005.1 tpg gene 220900 221127 . + . ID=gene-O5D79_001441;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=O5D79_001441 DALFDJ020000005.1 Protein Homology CDS 220900 221127 . + 0 ID=cds-HJH9162967.1;Parent=gene-O5D79_001441;Dbxref=NCBI_GP:HJH9162967.1;Name=HJH9162967.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460936.1;locus_tag=O5D79_001441;product=YodD family peroxide/acid resistance protein;protein_id=HJH9162967.1;transl_table=11 DALFDJ020000005.1 tpg gene 221437 222252 . + . ID=gene-O5D79_001442;Name=O5D79_001442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001442 DALFDJ020000005.1 Protein Homology CDS 221437 222252 . + 0 ID=cds-HJH9162968.1;Parent=gene-O5D79_001442;Dbxref=NCBI_GP:HJH9162968.1;Name=HJH9162968.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460937.1;locus_tag=O5D79_001442;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=HJH9162968.1;transl_table=11 DALFDJ020000005.1 tpg gene 222231 223943 . - . ID=gene-O5D79_001443;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=O5D79_001443 DALFDJ020000005.1 Protein Homology CDS 222231 223943 . - 0 ID=cds-HJH9162969.1;Parent=gene-O5D79_001443;Dbxref=NCBI_GP:HJH9162969.1;Name=HJH9162969.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460938.1;locus_tag=O5D79_001443;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=HJH9162969.1;transl_table=11 DALFDJ020000005.1 tpg gene 224108 224293 . - . ID=gene-O5D79_001444;Name=O5D79_001444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001444 DALFDJ020000005.1 Protein Homology CDS 224108 224293 . - 0 ID=cds-HJH9162970.1;Parent=gene-O5D79_001444;Dbxref=NCBI_GP:HJH9162970.1;Name=HJH9162970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549490.1;locus_tag=O5D79_001444;product=YodC family protein;protein_id=HJH9162970.1;transl_table=11 DALFDJ020000005.1 tpg gene 224370 225287 . - . ID=gene-O5D79_001445;Name=O5D79_001445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001445 DALFDJ020000005.1 Protein Homology CDS 224370 225287 . - 0 ID=cds-HJH9162971.1;Parent=gene-O5D79_001445;Dbxref=NCBI_GP:HJH9162971.1;Name=HJH9162971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=O5D79_001445;product=DUF808 domain-containing protein;protein_id=HJH9162971.1;transl_table=11 DALFDJ020000005.1 tpg gene 225457 226377 . + . ID=gene-O5D79_001446;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=O5D79_001446 DALFDJ020000005.1 Protein Homology CDS 225457 226377 . + 0 ID=cds-HJH9162972.1;Parent=gene-O5D79_001446;Dbxref=NCBI_GP:HJH9162972.1;Name=HJH9162972.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460941.1;locus_tag=O5D79_001446;product=drug/metabolite exporter YedA;protein_id=HJH9162972.1;transl_table=11 DALFDJ020000005.1 tpg gene 226366 226836 . - . ID=gene-O5D79_001447;Name=O5D79_001447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001447 DALFDJ020000005.1 Protein Homology CDS 226366 226836 . - 0 ID=cds-HJH9162973.1;Parent=gene-O5D79_001447;Dbxref=NCBI_GP:HJH9162973.1;Name=HJH9162973.1;Ontology_term=GO:0006298,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460942.1;locus_tag=O5D79_001447;product=very short patch repair endonuclease;protein_id=HJH9162973.1;transl_table=11 DALFDJ020000005.1 tpg gene 226817 228247 . - . ID=gene-O5D79_001448;Name=O5D79_001448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001448 DALFDJ020000005.1 Protein Homology CDS 226817 228247 . - 0 ID=cds-HJH9162974.1;Parent=gene-O5D79_001448;Dbxref=NCBI_GP:HJH9162974.1;Name=HJH9162974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460943.1;locus_tag=O5D79_001448;product=DNA cytosine methyltransferase;protein_id=HJH9162974.1;transl_table=11 DALFDJ020000005.1 tpg gene 228321 229016 . - . ID=gene-O5D79_001449;Name=O5D79_001449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001449 DALFDJ020000005.1 Protein Homology CDS 228321 229016 . - 0 ID=cds-HJH9162975.1;Parent=gene-O5D79_001449;Dbxref=NCBI_GP:HJH9162975.1;Name=HJH9162975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460944.1;locus_tag=O5D79_001449;product=phosphohydrolase;protein_id=HJH9162975.1;transl_table=11 DALFDJ020000005.1 tpg gene 229096 229407 . - . ID=gene-O5D79_001450;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=O5D79_001450 DALFDJ020000005.1 Protein Homology CDS 229096 229407 . - 0 ID=cds-HJH9162976.1;Parent=gene-O5D79_001450;Dbxref=NCBI_GP:HJH9162976.1;Name=HJH9162976.1;Ontology_term=GO:0051301;gbkey=CDS;gene=drpB;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460945.1;locus_tag=O5D79_001450;product=cell division protein DrpB;protein_id=HJH9162976.1;transl_table=11 DALFDJ020000005.1 tpg gene 230057 231235 . + . ID=gene-O5D79_001451;Name=ompS1;gbkey=Gene;gene=ompS1;gene_biotype=protein_coding;locus_tag=O5D79_001451 DALFDJ020000005.1 Protein Homology CDS 230057 231235 . + 0 ID=cds-HJH9162977.1;Parent=gene-O5D79_001451;Dbxref=NCBI_GP:HJH9162977.1;Name=HJH9162977.1;gbkey=CDS;gene=ompS1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460946.1;locus_tag=O5D79_001451;product=porin OmpS1;protein_id=HJH9162977.1;transl_table=11 DALFDJ020000005.1 tpg gene 231495 231683 . - . ID=gene-O5D79_001452;Name=O5D79_001452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001452 DALFDJ020000005.1 Protein Homology CDS 231495 231683 . - 0 ID=cds-HJH9162978.1;Parent=gene-O5D79_001452;Dbxref=NCBI_GP:HJH9162978.1;Name=HJH9162978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=O5D79_001452;product=cold-shock protein;protein_id=HJH9162978.1;transl_table=11 DALFDJ020000005.1 tpg gene 231694 231906 . - . ID=gene-O5D79_001453;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=O5D79_001453 DALFDJ020000005.1 Protein Homology CDS 231694 231906 . - 0 ID=cds-HJH9162979.1;Parent=gene-O5D79_001453;Dbxref=NCBI_GP:HJH9162979.1;Name=HJH9162979.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460947.1;locus_tag=O5D79_001453;product=transcription antiterminator/RNA stability regulator CspE;protein_id=HJH9162979.1;transl_table=11 DALFDJ020000005.1 tpg gene 232446 232823 . - . ID=gene-O5D79_001454;Name=O5D79_001454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001454 DALFDJ020000005.1 Protein Homology CDS 232446 232823 . - 0 ID=cds-HJH9162980.1;Parent=gene-O5D79_001454;Dbxref=NCBI_GP:HJH9162980.1;Name=HJH9162980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574179.1;locus_tag=O5D79_001454;product=hypothetical protein;protein_id=HJH9162980.1;transl_table=11 DALFDJ020000005.1 tpg gene 232820 233098 . - . ID=gene-O5D79_001455;Name=O5D79_001455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001455 DALFDJ020000005.1 Protein Homology CDS 232820 233098 . - 0 ID=cds-HJH9162981.1;Parent=gene-O5D79_001455;Dbxref=NCBI_GP:HJH9162981.1;Name=HJH9162981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675348.1;locus_tag=O5D79_001455;product=hypothetical protein;protein_id=HJH9162981.1;transl_table=11 DALFDJ020000005.1 tpg gene 233366 234145 . + . ID=gene-O5D79_001456;Name=O5D79_001456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001456 DALFDJ020000005.1 Protein Homology CDS 233366 234145 . + 0 ID=cds-HJH9162982.1;Parent=gene-O5D79_001456;Dbxref=NCBI_GP:HJH9162982.1;Name=HJH9162982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000686692.1;locus_tag=O5D79_001456;product=hypothetical protein;protein_id=HJH9162982.1;transl_table=11 DALFDJ020000005.1 tpg gene 234283 234371 . - . ID=gene-O5D79_001457;Name=O5D79_001457;end_range=234371,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001457;partial=true DALFDJ020000005.1 Protein Homology CDS 234283 234371 . - 2 ID=cds-HJH9162983.1;Parent=gene-O5D79_001457;Dbxref=NCBI_GP:HJH9162983.1;Name=HJH9162983.1;Ontology_term=GO:0015074;end_range=234371,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=O5D79_001457;partial=true;product=IS3 family transposase;protein_id=HJH9162983.1;transl_table=11 ##sequence-region DALFDJ020000006.1 1 206127 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000006.1 tpg region 1 206127 . + . ID=DALFDJ020000006.1:1..206127;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000006.1 tpg gene 1 1878 . + . ID=gene-O5D79_001458;Name=O5D79_001458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001458;partial=true;start_range=.,1 DALFDJ020000006.1 Protein Homology CDS 1 1878 . + 0 ID=cds-HJH9162984.1;Parent=gene-O5D79_001458;Dbxref=NCBI_GP:HJH9162984.1;Name=HJH9162984.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF014567.6;locus_tag=O5D79_001458;partial=true;product=sensor histidine kinase;protein_id=HJH9162984.1;start_range=.,1;transl_table=11 DALFDJ020000006.1 tpg gene 1880 3739 . + . ID=gene-O5D79_001459;Name=O5D79_001459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001459 DALFDJ020000006.1 GeneMarkS-2+ CDS 1880 3739 . + 0 ID=cds-HJH9162985.1;Parent=gene-O5D79_001459;Dbxref=NCBI_GP:HJH9162985.1;Name=HJH9162985.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_001459;product=hypothetical protein;protein_id=HJH9162985.1;transl_table=11 DALFDJ020000006.1 tpg gene 3776 4618 . - . ID=gene-O5D79_001460;Name=O5D79_001460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001460 DALFDJ020000006.1 Protein Homology CDS 3776 4618 . - 0 ID=cds-HJH9162986.1;Parent=gene-O5D79_001460;Dbxref=NCBI_GP:HJH9162986.1;Name=HJH9162986.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094409.1;locus_tag=O5D79_001460;product=phosphoadenosine phosphosulfate reductase family protein;protein_id=HJH9162986.1;transl_table=11 DALFDJ020000006.1 tpg gene 4619 7942 . - . ID=gene-O5D79_001461;Name=O5D79_001461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001461 DALFDJ020000006.1 Protein Homology CDS 4619 7942 . - 0 ID=cds-HJH9162987.1;Parent=gene-O5D79_001461;Dbxref=NCBI_GP:HJH9162987.1;Name=HJH9162987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010277939.1;locus_tag=O5D79_001461;product=ATP-binding protein;protein_id=HJH9162987.1;transl_table=11 DALFDJ020000006.1 tpg gene 7932 8870 . - . ID=gene-O5D79_001462;Name=O5D79_001462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001462 DALFDJ020000006.1 Protein Homology CDS 7932 8870 . - 0 ID=cds-HJH9162988.1;Parent=gene-O5D79_001462;Dbxref=NCBI_GP:HJH9162988.1;Name=HJH9162988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000929962.1;locus_tag=O5D79_001462;product=DUF4007 family protein;protein_id=HJH9162988.1;transl_table=11 DALFDJ020000006.1 tpg gene 9285 9578 . + . ID=gene-O5D79_001463;Name=O5D79_001463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001463 DALFDJ020000006.1 Protein Homology CDS 9285 9578 . + 0 ID=cds-HJH9162989.1;Parent=gene-O5D79_001463;Dbxref=NCBI_GP:HJH9162989.1;Name=HJH9162989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001143292.1;locus_tag=O5D79_001463;product=hypothetical protein;protein_id=HJH9162989.1;transl_table=11 DALFDJ020000006.1 tpg gene 9663 10574 . + . ID=gene-O5D79_001464;Name=O5D79_001464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001464 DALFDJ020000006.1 Protein Homology CDS 9663 10574 . + 0 ID=cds-HJH9162990.1;Parent=gene-O5D79_001464;Dbxref=NCBI_GP:HJH9162990.1;Name=HJH9162990.1;Ontology_term=GO:0003697,GO:0008237,GO:0008270;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748766.1;locus_tag=O5D79_001464;product=ArdC family protein;protein_id=HJH9162990.1;transl_table=11 DALFDJ020000006.1 tpg gene 10680 11135 . + . ID=gene-O5D79_001465;Name=O5D79_001465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001465 DALFDJ020000006.1 Protein Homology CDS 10680 11135 . + 0 ID=cds-HJH9162991.1;Parent=gene-O5D79_001465;Dbxref=NCBI_GP:HJH9162991.1;Name=HJH9162991.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001805394.1;locus_tag=O5D79_001465;product=NUDIX hydrolase;protein_id=HJH9162991.1;transl_table=11 DALFDJ020000006.1 tpg gene 11303 12922 . + . ID=gene-O5D79_001466;Name=mobH;gbkey=Gene;gene=mobH;gene_biotype=protein_coding;locus_tag=O5D79_001466 DALFDJ020000006.1 Protein Homology CDS 11303 12922 . + 0 ID=cds-HJH9162992.1;Parent=gene-O5D79_001466;Dbxref=NCBI_GP:HJH9162992.1;Name=HJH9162992.1;gbkey=CDS;gene=mobH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003830239.1;locus_tag=O5D79_001466;product=MobH family relaxase;protein_id=HJH9162992.1;transl_table=11 DALFDJ020000006.1 tpg gene 12912 13838 . + . ID=gene-O5D79_001467;Name=O5D79_001467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001467 DALFDJ020000006.1 Protein Homology CDS 12912 13838 . + 0 ID=cds-HJH9162993.1;Parent=gene-O5D79_001467;Dbxref=NCBI_GP:HJH9162993.1;Name=HJH9162993.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000142418.1;locus_tag=O5D79_001467;product=tyrosine-type recombinase/integrase;protein_id=HJH9162993.1;transl_table=11 DALFDJ020000006.1 tpg gene 13988 14072 . - . ID=gene-O5D79_001468;Name=O5D79_001468;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_001468 DALFDJ020000006.1 tRNAscan-SE tRNA 13988 14072 . - . ID=rna-O5D79_001468;Parent=gene-O5D79_001468;anticodon=(pos:complement(14036..14038));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001468;product=tRNA-Leu DALFDJ020000006.1 tRNAscan-SE exon 13988 14072 . - . ID=exon-O5D79_001468-1;Parent=rna-O5D79_001468;anticodon=(pos:complement(14036..14038));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001468;product=tRNA-Leu DALFDJ020000006.1 tpg gene 14295 15314 . + . ID=gene-O5D79_001469;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=O5D79_001469 DALFDJ020000006.1 Protein Homology CDS 14295 15314 . + 0 ID=cds-HJH9162994.1;Parent=gene-O5D79_001469;Dbxref=NCBI_GP:HJH9162994.1;Name=HJH9162994.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=O5D79_001469;product=NADPH-dependent aldehyde reductase Ahr;protein_id=HJH9162994.1;transl_table=11 DALFDJ020000006.1 tpg gene 15342 15872 . - . ID=gene-O5D79_001470;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=O5D79_001470 DALFDJ020000006.1 Protein Homology CDS 15342 15872 . - 0 ID=cds-HJH9162995.1;Parent=gene-O5D79_001470;Dbxref=NCBI_GP:HJH9162995.1;Name=HJH9162995.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463345.1;locus_tag=O5D79_001470;product=gluconokinase;protein_id=HJH9162995.1;transl_table=11 DALFDJ020000006.1 tpg gene 16089 17120 . + . ID=gene-O5D79_001471;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=O5D79_001471 DALFDJ020000006.1 Protein Homology CDS 16089 17120 . + 0 ID=cds-HJH9162996.1;Parent=gene-O5D79_001471;Dbxref=NCBI_GP:HJH9162996.1;Name=HJH9162996.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463344.1;locus_tag=O5D79_001471;product=L-idonate 5-dehydrogenase;protein_id=HJH9162996.1;transl_table=11 DALFDJ020000006.1 tpg gene 17145 17909 . + . ID=gene-O5D79_001472;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=O5D79_001472 DALFDJ020000006.1 Protein Homology CDS 17145 17909 . + 0 ID=cds-HJH9162997.1;Parent=gene-O5D79_001472;Dbxref=NCBI_GP:HJH9162997.1;Name=HJH9162997.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463343.1;locus_tag=O5D79_001472;product=gluconate 5-dehydrogenase;protein_id=HJH9162997.1;transl_table=11 DALFDJ020000006.1 tpg gene 17971 19290 . + . ID=gene-O5D79_001473;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=O5D79_001473 DALFDJ020000006.1 Protein Homology CDS 17971 19290 . + 0 ID=cds-HJH9162998.1;Parent=gene-O5D79_001473;Dbxref=NCBI_GP:HJH9162998.1;Name=HJH9162998.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463342.1;locus_tag=O5D79_001473;product=gnt-II system L-idonate transporter;protein_id=HJH9162998.1;transl_table=11 DALFDJ020000006.1 tpg gene 19354 20352 . + . ID=gene-O5D79_001474;Name=idnR;gbkey=Gene;gene=idnR;gene_biotype=protein_coding;gene_synonym=gntH,yjgS;locus_tag=O5D79_001474 DALFDJ020000006.1 Protein Homology CDS 19354 20352 . + 0 ID=cds-HJH9162999.1;Parent=gene-O5D79_001474;Dbxref=NCBI_GP:HJH9162999.1;Name=HJH9162999.1;Ontology_term=GO:0006355,GO:0019521,GO:0003700;gbkey=CDS;gene=idnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463341.1;locus_tag=O5D79_001474;product=DNA-binding transcriptional regulator IdnR;protein_id=HJH9162999.1;transl_table=11 DALFDJ020000006.1 tpg gene 20548 21630 . - . ID=gene-O5D79_001475;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=O5D79_001475 DALFDJ020000006.1 Protein Homology CDS 20548 21630 . - 0 ID=cds-HJH9163000.1;Parent=gene-O5D79_001475;Dbxref=NCBI_GP:HJH9163000.1;Name=HJH9163000.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463340.1;locus_tag=O5D79_001475;product=LPS export ABC transporter permease LptG;protein_id=HJH9163000.1;transl_table=11 DALFDJ020000006.1 tpg gene 21630 22730 . - . ID=gene-O5D79_001476;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=O5D79_001476 DALFDJ020000006.1 Protein Homology CDS 21630 22730 . - 0 ID=cds-HJH9163001.1;Parent=gene-O5D79_001476;Dbxref=NCBI_GP:HJH9163001.1;Name=HJH9163001.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463339.1;locus_tag=O5D79_001476;product=LPS export ABC transporter permease LptF;protein_id=HJH9163001.1;transl_table=11 DALFDJ020000006.1 tpg gene 22794 22844 . - . ID=gene-O5D79_001477;Name=O5D79_001477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001477 DALFDJ020000006.1 Protein Homology CDS 22794 22844 . - 0 ID=cds-HJH9163002.1;Parent=gene-O5D79_001477;Dbxref=NCBI_GP:HJH9163002.1;Name=HJH9163002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=O5D79_001477;product=hypothetical protein;protein_id=HJH9163002.1;transl_table=11 DALFDJ020000006.1 tpg gene 23125 24636 . + . ID=gene-O5D79_001478;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=O5D79_001478 DALFDJ020000006.1 Protein Homology CDS 23125 24636 . + 0 ID=cds-HJH9163003.1;Parent=gene-O5D79_001478;Dbxref=NCBI_GP:HJH9163003.1;Name=HJH9163003.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=O5D79_001478;product=leucyl aminopeptidase;protein_id=HJH9163003.1;transl_table=11 DALFDJ020000006.1 tpg gene 24773 25216 . + . ID=gene-O5D79_001479;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=O5D79_001479 DALFDJ020000006.1 Protein Homology CDS 24773 25216 . + 0 ID=cds-HJH9163004.1;Parent=gene-O5D79_001479;Dbxref=NCBI_GP:HJH9163004.1;Name=HJH9163004.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=O5D79_001479;product=DNA polymerase III subunit chi;protein_id=HJH9163004.1;transl_table=11 DALFDJ020000006.1 tpg gene 25216 28071 . + . ID=gene-O5D79_001480;Name=O5D79_001480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001480 DALFDJ020000006.1 Protein Homology CDS 25216 28071 . + 0 ID=cds-HJH9163005.1;Parent=gene-O5D79_001480;Dbxref=NCBI_GP:HJH9163005.1;Name=HJH9163005.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=O5D79_001480;product=valine--tRNA ligase;protein_id=HJH9163005.1;transl_table=11 DALFDJ020000006.1 tpg gene 28213 29400 . - . ID=gene-O5D79_001481;Name=O5D79_001481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001481 DALFDJ020000006.1 Protein Homology CDS 28213 29400 . - 0 ID=cds-HJH9163006.1;Parent=gene-O5D79_001481;Dbxref=NCBI_GP:HJH9163006.1;Name=HJH9163006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463334.1;locus_tag=O5D79_001481;product=YjgN family protein;protein_id=HJH9163006.1;transl_table=11 DALFDJ020000006.1 tpg gene 29595 30098 . + . ID=gene-O5D79_001482;Name=O5D79_001482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001482 DALFDJ020000006.1 Protein Homology CDS 29595 30098 . + 0 ID=cds-HJH9163007.1;Parent=gene-O5D79_001482;Dbxref=NCBI_GP:HJH9163007.1;Name=HJH9163007.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463333.1;locus_tag=O5D79_001482;product=GNAT family N-acetyltransferase;protein_id=HJH9163007.1;transl_table=11 DALFDJ020000006.1 tpg gene 30205 30693 . + . ID=gene-O5D79_001483;Name=O5D79_001483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001483 DALFDJ020000006.1 Protein Homology CDS 30205 30693 . + 0 ID=cds-HJH9163008.1;Parent=gene-O5D79_001483;Dbxref=NCBI_GP:HJH9163008.1;Name=HJH9163008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463332.1;locus_tag=O5D79_001483;product=DUF3617 domain-containing protein;protein_id=HJH9163008.1;transl_table=11 DALFDJ020000006.1 tpg gene 30927 31739 . - . ID=gene-O5D79_001484;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=O5D79_001484 DALFDJ020000006.1 Protein Homology CDS 30927 31739 . - 0 ID=cds-HJH9163009.1;Parent=gene-O5D79_001484;Dbxref=NCBI_GP:HJH9163009.1;Name=HJH9163009.1;Ontology_term=GO:0006400,GO:0004497,GO:0045301,GO:0046872;gbkey=CDS;gene=miaE;go_function=monooxygenase activity|0004497||IEA,tRNA 2-(methylsulfanyl)-N(6)-isopentenyladenosine(37) hydroxylase activity|0045301||IEA,metal ion binding|0046872||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463331.1;locus_tag=O5D79_001484;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=HJH9163009.1;transl_table=11 DALFDJ020000006.1 tpg gene 31751 32167 . - . ID=gene-O5D79_001485;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=O5D79_001485 DALFDJ020000006.1 Protein Homology CDS 31751 32167 . - 0 ID=cds-HJH9163010.1;Parent=gene-O5D79_001485;Dbxref=NCBI_GP:HJH9163010.1;Name=HJH9163010.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463330.1;locus_tag=O5D79_001485;product=ribonuclease E inhibitor RraB;protein_id=HJH9163010.1;transl_table=11 DALFDJ020000006.1 tpg gene 32268 32363 . + . ID=gene-O5D79_001486;Name=argL;gbkey=Gene;gene=argL;gene_biotype=protein_coding;locus_tag=O5D79_001486 DALFDJ020000006.1 Protein Homology CDS 32268 32363 . + 0 ID=cds-HJH9163011.1;Parent=gene-O5D79_001486;Dbxref=NCBI_GP:HJH9163011.1;Name=HJH9163011.1;gbkey=CDS;gene=argL;inference=COORDINATES: protein motif:HMM:NF047283.2;locus_tag=O5D79_001486;product=putative translational regulatory protein ArgL;protein_id=HJH9163011.1;transl_table=11 DALFDJ020000006.1 tpg gene 32333 33337 . + . ID=gene-O5D79_001487;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=O5D79_001487 DALFDJ020000006.1 Protein Homology CDS 32333 33337 . + 0 ID=cds-HJH9163012.1;Parent=gene-O5D79_001487;Dbxref=NCBI_GP:HJH9163012.1;Name=HJH9163012.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463329.1;locus_tag=O5D79_001487;product=ornithine carbamoyltransferase;protein_id=HJH9163012.1;transl_table=11 DALFDJ020000006.1 tpg gene 33411 33863 . - . ID=gene-O5D79_001488;Name=O5D79_001488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001488 DALFDJ020000006.1 Protein Homology CDS 33411 33863 . - 0 ID=cds-HJH9163013.1;Parent=gene-O5D79_001488;Dbxref=NCBI_GP:HJH9163013.1;Name=HJH9163013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463328.1;locus_tag=O5D79_001488;product=YhcH/YjgK/YiaL family protein;protein_id=HJH9163013.1;transl_table=11 DALFDJ020000006.1 tpg gene 34539 35759 . + . ID=gene-O5D79_001489;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=O5D79_001489 DALFDJ020000006.1 Protein Homology CDS 34539 35759 . + 0 ID=cds-HJH9163014.1;Parent=gene-O5D79_001489;Dbxref=NCBI_GP:HJH9163014.1;Name=HJH9163014.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=O5D79_001489;product=arginine deiminase;protein_id=HJH9163014.1;transl_table=11 DALFDJ020000006.1 tpg gene 35770 36702 . + . ID=gene-O5D79_001490;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=O5D79_001490 DALFDJ020000006.1 Protein Homology CDS 35770 36702 . + 0 ID=cds-HJH9163015.1;Parent=gene-O5D79_001490;Dbxref=NCBI_GP:HJH9163015.1;Name=HJH9163015.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463326.1;locus_tag=O5D79_001490;product=carbamate kinase;protein_id=HJH9163015.1;transl_table=11 DALFDJ020000006.1 tpg gene 36814 37818 . + . ID=gene-O5D79_001491;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=O5D79_001491 DALFDJ020000006.1 Protein Homology CDS 36814 37818 . + 0 ID=cds-HJH9163016.1;Parent=gene-O5D79_001491;Dbxref=NCBI_GP:HJH9163016.1;Name=HJH9163016.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=O5D79_001491;product=ornithine carbamoyltransferase;protein_id=HJH9163016.1;transl_table=11 DALFDJ020000006.1 tpg gene 37874 39277 . + . ID=gene-O5D79_001492;Name=O5D79_001492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001492 DALFDJ020000006.1 Protein Homology CDS 37874 39277 . + 0 ID=cds-HJH9163017.1;Parent=gene-O5D79_001492;Dbxref=NCBI_GP:HJH9163017.1;Name=HJH9163017.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463324.1;locus_tag=O5D79_001492;product=YfcC family protein;protein_id=HJH9163017.1;transl_table=11 DALFDJ020000006.1 tpg gene 39464 39952 . + . ID=gene-O5D79_001493;Name=O5D79_001493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001493 DALFDJ020000006.1 Protein Homology CDS 39464 39952 . + 0 ID=cds-HJH9163018.1;Parent=gene-O5D79_001493;Dbxref=NCBI_GP:HJH9163018.1;Name=HJH9163018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463323.1;locus_tag=O5D79_001493;product=arginine repressor;protein_id=HJH9163018.1;transl_table=11 DALFDJ020000006.1 tpg pseudogene 39922 40063 . - . ID=gene-O5D79_001494;Name=O5D79_001494;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001494;pseudo=true DALFDJ020000006.1 Protein Homology CDS 39922 40063 . - 0 ID=cds-O5D79_001494;Parent=gene-O5D79_001494;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=O5D79_001494;product=hypothetical protein;pseudo=true;transl_table=11 DALFDJ020000006.1 tpg gene 40043 40144 . + . ID=gene-O5D79_001495;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=O5D79_001495 DALFDJ020000006.1 Protein Homology CDS 40043 40144 . + 0 ID=cds-HJH9163019.1;Parent=gene-O5D79_001495;Dbxref=NCBI_GP:HJH9163019.1;Name=HJH9163019.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=O5D79_001495;product=pyr operon leader peptide;protein_id=HJH9163019.1;transl_table=11 DALFDJ020000006.1 tpg gene 40180 41115 . + . ID=gene-O5D79_001496;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=O5D79_001496 DALFDJ020000006.1 Protein Homology CDS 40180 41115 . + 0 ID=cds-HJH9163020.1;Parent=gene-O5D79_001496;Dbxref=NCBI_GP:HJH9163020.1;Name=HJH9163020.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463320.1;locus_tag=O5D79_001496;product=aspartate carbamoyltransferase;protein_id=HJH9163020.1;transl_table=11 DALFDJ020000006.1 tpg gene 41128 41589 . + . ID=gene-O5D79_001497;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=O5D79_001497 DALFDJ020000006.1 Protein Homology CDS 41128 41589 . + 0 ID=cds-HJH9163021.1;Parent=gene-O5D79_001497;Dbxref=NCBI_GP:HJH9163021.1;Name=HJH9163021.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=O5D79_001497;product=aspartate carbamoyltransferase regulatory subunit;protein_id=HJH9163021.1;transl_table=11 DALFDJ020000006.1 tpg gene 41666 42052 . + . ID=gene-O5D79_001498;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=O5D79_001498 DALFDJ020000006.1 Protein Homology CDS 41666 42052 . + 0 ID=cds-HJH9163022.1;Parent=gene-O5D79_001498;Dbxref=NCBI_GP:HJH9163022.1;Name=HJH9163022.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463318.1;locus_tag=O5D79_001498;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=HJH9163022.1;transl_table=11 DALFDJ020000006.1 tpg gene 42127 42573 . + . ID=gene-O5D79_001499;Name=O5D79_001499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001499 DALFDJ020000006.1 Protein Homology CDS 42127 42573 . + 0 ID=cds-HJH9163023.1;Parent=gene-O5D79_001499;Dbxref=NCBI_GP:HJH9163023.1;Name=HJH9163023.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463317.1;locus_tag=O5D79_001499;product=transposase;protein_id=HJH9163023.1;transl_table=11 DALFDJ020000006.1 tpg gene 42689 45397 . - . ID=gene-O5D79_001500;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=O5D79_001500 DALFDJ020000006.1 Protein Homology CDS 42689 45397 . - 0 ID=cds-HJH9163024.1;Parent=gene-O5D79_001500;Dbxref=NCBI_GP:HJH9163024.1;Name=HJH9163024.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463316.1;locus_tag=O5D79_001500;product=magnesium-translocating P-type ATPase;protein_id=HJH9163024.1;transl_table=11 DALFDJ020000006.1 tpg gene 45538 45636 . - . ID=gene-O5D79_001501;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=O5D79_001501 DALFDJ020000006.1 Protein Homology CDS 45538 45636 . - 0 ID=cds-HJH9163025.1;Parent=gene-O5D79_001501;Dbxref=NCBI_GP:HJH9163025.1;Name=HJH9163025.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: protein motif:HMM:NF028369.6;locus_tag=O5D79_001501;product=mgtA regulatory leader peptide MgtL;protein_id=HJH9163025.1;transl_table=11 DALFDJ020000006.1 tpg gene 45781 46728 . + . ID=gene-O5D79_001502;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=O5D79_001502 DALFDJ020000006.1 Protein Homology CDS 45781 46728 . + 0 ID=cds-HJH9163026.1;Parent=gene-O5D79_001502;Dbxref=NCBI_GP:HJH9163026.1;Name=HJH9163026.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463315.1;locus_tag=O5D79_001502;product=trehalose operon repressor TreR;protein_id=HJH9163026.1;transl_table=11 DALFDJ020000006.1 tpg gene 46866 48284 . + . ID=gene-O5D79_001503;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=O5D79_001503 DALFDJ020000006.1 Protein Homology CDS 46866 48284 . + 0 ID=cds-HJH9163027.1;Parent=gene-O5D79_001503;Dbxref=NCBI_GP:HJH9163027.1;Name=HJH9163027.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=O5D79_001503;product=PTS trehalose transporter subunit IIBC;protein_id=HJH9163027.1;transl_table=11 DALFDJ020000006.1 tpg gene 48334 49986 . + . ID=gene-O5D79_001504;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=O5D79_001504 DALFDJ020000006.1 Protein Homology CDS 48334 49986 . + 0 ID=cds-HJH9163028.1;Parent=gene-O5D79_001504;Dbxref=NCBI_GP:HJH9163028.1;Name=HJH9163028.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463314.1;locus_tag=O5D79_001504;product=alpha%2Calpha-phosphotrehalase;protein_id=HJH9163028.1;transl_table=11 DALFDJ020000006.1 tpg gene 50395 52533 . + . ID=gene-O5D79_001505;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=O5D79_001505 DALFDJ020000006.1 Protein Homology CDS 50395 52533 . + 0 ID=cds-HJH9163029.1;Parent=gene-O5D79_001505;Dbxref=NCBI_GP:HJH9163029.1;Name=HJH9163029.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=O5D79_001505;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=HJH9163029.1;transl_table=11 DALFDJ020000006.1 tpg gene 52655 53119 . + . ID=gene-O5D79_001506;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=O5D79_001506 DALFDJ020000006.1 Protein Homology CDS 52655 53119 . + 0 ID=cds-HJH9163030.1;Parent=gene-O5D79_001506;Dbxref=NCBI_GP:HJH9163030.1;Name=HJH9163030.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463312.1;locus_tag=O5D79_001506;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=HJH9163030.1;transl_table=11 DALFDJ020000006.1 tpg gene 53123 53407 . - . ID=gene-O5D79_001507;Name=O5D79_001507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001507 DALFDJ020000006.1 Protein Homology CDS 53123 53407 . - 0 ID=cds-HJH9163031.1;Parent=gene-O5D79_001507;Dbxref=NCBI_GP:HJH9163031.1;Name=HJH9163031.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463311.1;locus_tag=O5D79_001507;product=type II toxin-antitoxin system RelE family toxin;protein_id=HJH9163031.1;transl_table=11 DALFDJ020000006.1 tpg gene 53397 53639 . - . ID=gene-O5D79_001508;Name=O5D79_001508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001508 DALFDJ020000006.1 Protein Homology CDS 53397 53639 . - 0 ID=cds-HJH9163032.1;Parent=gene-O5D79_001508;Dbxref=NCBI_GP:HJH9163032.1;Name=HJH9163032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463310.1;locus_tag=O5D79_001508;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=HJH9163032.1;transl_table=11 DALFDJ020000006.1 tpg gene 53717 55630 . - . ID=gene-O5D79_001509;Name=O5D79_001509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001509 DALFDJ020000006.1 Protein Homology CDS 53717 55630 . - 0 ID=cds-HJH9163033.1;Parent=gene-O5D79_001509;Dbxref=NCBI_GP:HJH9163033.1;Name=HJH9163033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463309.1;locus_tag=O5D79_001509;product=BglG family transcription antiterminator;protein_id=HJH9163033.1;transl_table=11 DALFDJ020000006.1 tpg gene 55647 56387 . - . ID=gene-O5D79_001510;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=O5D79_001510 DALFDJ020000006.1 Protein Homology CDS 55647 56387 . - 0 ID=cds-HJH9163034.1;Parent=gene-O5D79_001510;Dbxref=NCBI_GP:HJH9163034.1;Name=HJH9163034.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463308.2;locus_tag=O5D79_001510;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=HJH9163034.1;transl_table=11 DALFDJ020000006.1 tpg gene 56384 57502 . - . ID=gene-O5D79_001511;Name=O5D79_001511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001511 DALFDJ020000006.1 Protein Homology CDS 56384 57502 . - 0 ID=cds-HJH9163035.1;Parent=gene-O5D79_001511;Dbxref=NCBI_GP:HJH9163035.1;Name=HJH9163035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463307.1;locus_tag=O5D79_001511;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=HJH9163035.1;transl_table=11 DALFDJ020000006.1 tpg gene 57486 58619 . - . ID=gene-O5D79_001512;Name=O5D79_001512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001512 DALFDJ020000006.1 Protein Homology CDS 57486 58619 . - 0 ID=cds-HJH9163036.1;Parent=gene-O5D79_001512;Dbxref=NCBI_GP:HJH9163036.1;Name=HJH9163036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463306.1;locus_tag=O5D79_001512;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=HJH9163036.1;transl_table=11 DALFDJ020000006.1 tpg gene 58678 59322 . - . ID=gene-O5D79_001513;Name=O5D79_001513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001513 DALFDJ020000006.1 Protein Homology CDS 58678 59322 . - 0 ID=cds-HJH9163037.1;Parent=gene-O5D79_001513;Dbxref=NCBI_GP:HJH9163037.1;Name=HJH9163037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463305.1;locus_tag=O5D79_001513;product=DUF4310 family protein;protein_id=HJH9163037.1;transl_table=11 DALFDJ020000006.1 tpg gene 59334 60110 . - . ID=gene-O5D79_001514;Name=O5D79_001514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001514 DALFDJ020000006.1 Protein Homology CDS 59334 60110 . - 0 ID=cds-HJH9163038.1;Parent=gene-O5D79_001514;Dbxref=NCBI_GP:HJH9163038.1;Name=HJH9163038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463304.1;locus_tag=O5D79_001514;product=DUF4311 domain-containing protein;protein_id=HJH9163038.1;transl_table=11 DALFDJ020000006.1 tpg gene 60133 60435 . - . ID=gene-O5D79_001515;Name=O5D79_001515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001515 DALFDJ020000006.1 Protein Homology CDS 60133 60435 . - 0 ID=cds-HJH9163039.1;Parent=gene-O5D79_001515;Dbxref=NCBI_GP:HJH9163039.1;Name=HJH9163039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463303.1;locus_tag=O5D79_001515;product=DUF4312 family protein;protein_id=HJH9163039.1;transl_table=11 DALFDJ020000006.1 tpg gene 60435 60797 . - . ID=gene-O5D79_001516;Name=O5D79_001516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001516 DALFDJ020000006.1 Protein Homology CDS 60435 60797 . - 0 ID=cds-HJH9163040.1;Parent=gene-O5D79_001516;Dbxref=NCBI_GP:HJH9163040.1;Name=HJH9163040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=O5D79_001516;product=SFCGS family glycine-rich protein;protein_id=HJH9163040.1;transl_table=11 DALFDJ020000006.1 tpg gene 60808 61146 . - . ID=gene-O5D79_001517;Name=O5D79_001517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001517 DALFDJ020000006.1 Protein Homology CDS 60808 61146 . - 0 ID=cds-HJH9163041.1;Parent=gene-O5D79_001517;Dbxref=NCBI_GP:HJH9163041.1;Name=HJH9163041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463301.1;locus_tag=O5D79_001517;product=glycine dehydrogenase;protein_id=HJH9163041.1;transl_table=11 DALFDJ020000006.1 tpg gene 61424 61810 . - . ID=gene-O5D79_001518;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=O5D79_001518 DALFDJ020000006.1 Protein Homology CDS 61424 61810 . - 0 ID=cds-HJH9163042.1;Parent=gene-O5D79_001518;Dbxref=NCBI_GP:HJH9163042.1;Name=HJH9163042.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463300.1;locus_tag=O5D79_001518;product=cytochrome b562;protein_id=HJH9163042.1;transl_table=11 DALFDJ020000006.1 tpg gene 61909 63261 . - . ID=gene-O5D79_001519;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=O5D79_001519 DALFDJ020000006.1 Protein Homology CDS 61909 63261 . - 0 ID=cds-HJH9163043.1;Parent=gene-O5D79_001519;Dbxref=NCBI_GP:HJH9163043.1;Name=HJH9163043.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=O5D79_001519;product=metalloprotease PmbA;protein_id=HJH9163043.1;transl_table=11 DALFDJ020000006.1 tpg gene 63357 63908 . + . ID=gene-O5D79_001520;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=O5D79_001520 DALFDJ020000006.1 Protein Homology CDS 63357 63908 . + 0 ID=cds-HJH9163044.1;Parent=gene-O5D79_001520;Dbxref=NCBI_GP:HJH9163044.1;Name=HJH9163044.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463298.1;locus_tag=O5D79_001520;product=ribosome biogenesis factor YjgA;protein_id=HJH9163044.1;transl_table=11 DALFDJ020000006.1 tpg gene 64015 65388 . - . ID=gene-O5D79_001521;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=O5D79_001521 DALFDJ020000006.1 Protein Homology CDS 64015 65388 . - 0 ID=cds-HJH9163045.1;Parent=gene-O5D79_001521;Dbxref=NCBI_GP:HJH9163045.1;Name=HJH9163045.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001219850.1;locus_tag=O5D79_001521;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=HJH9163045.1;transl_table=11 DALFDJ020000006.1 tpg gene 65563 66561 . + . ID=gene-O5D79_001522;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=O5D79_001522 DALFDJ020000006.1 Protein Homology CDS 65563 66561 . + 0 ID=cds-HJH9163046.1;Parent=gene-O5D79_001522;Dbxref=NCBI_GP:HJH9163046.1;Name=HJH9163046.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=O5D79_001522;product=class 1 fructose-bisphosphatase;protein_id=HJH9163046.1;transl_table=11 DALFDJ020000006.1 tpg gene 66788 67318 . + . ID=gene-O5D79_001523;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=O5D79_001523 DALFDJ020000006.1 Protein Homology CDS 66788 67318 . + 0 ID=cds-HJH9163047.1;Parent=gene-O5D79_001523;Dbxref=NCBI_GP:HJH9163047.1;Name=HJH9163047.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=O5D79_001523;product=inorganic diphosphatase;protein_id=HJH9163047.1;transl_table=11 DALFDJ020000006.1 tpg gene 67728 68891 . + . ID=gene-O5D79_001524;Name=O5D79_001524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001524 DALFDJ020000006.1 Protein Homology CDS 67728 68891 . + 0 ID=cds-HJH9163048.1;Parent=gene-O5D79_001524;Dbxref=NCBI_GP:HJH9163048.1;Name=HJH9163048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463274.1;locus_tag=O5D79_001524;product=metallo-dependent hydrolase;protein_id=HJH9163048.1;transl_table=11 DALFDJ020000006.1 tpg gene 68888 70096 . + . ID=gene-O5D79_001525;Name=O5D79_001525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001525 DALFDJ020000006.1 Protein Homology CDS 68888 70096 . + 0 ID=cds-HJH9163049.1;Parent=gene-O5D79_001525;Dbxref=NCBI_GP:HJH9163049.1;Name=HJH9163049.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463273.1;locus_tag=O5D79_001525;product=MFS transporter;protein_id=HJH9163049.1;transl_table=11 DALFDJ020000006.1 tpg gene 70150 70494 . - . ID=gene-O5D79_001526;Name=O5D79_001526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001526 DALFDJ020000006.1 Protein Homology CDS 70150 70494 . - 0 ID=cds-HJH9163050.1;Parent=gene-O5D79_001526;Dbxref=NCBI_GP:HJH9163050.1;Name=HJH9163050.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463272.1;locus_tag=O5D79_001526;product=gamma-glutamylcyclotransferase family protein;protein_id=HJH9163050.1;transl_table=11 DALFDJ020000006.1 tpg gene 70497 74276 . - . ID=gene-O5D79_001527;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=O5D79_001527 DALFDJ020000006.1 Protein Homology CDS 70497 74276 . - 0 ID=cds-HJH9163051.1;Parent=gene-O5D79_001527;Dbxref=NCBI_GP:HJH9163051.1;Name=HJH9163051.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463271.1;locus_tag=O5D79_001527;product=autotransporter assembly complex protein TamB;protein_id=HJH9163051.1;transl_table=11 DALFDJ020000006.1 tpg gene 74273 76006 . - . ID=gene-O5D79_001528;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=O5D79_001528 DALFDJ020000006.1 Protein Homology CDS 74273 76006 . - 0 ID=cds-HJH9163052.1;Parent=gene-O5D79_001528;Dbxref=NCBI_GP:HJH9163052.1;Name=HJH9163052.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463270.1;locus_tag=O5D79_001528;product=autotransporter assembly complex protein TamA;protein_id=HJH9163052.1;transl_table=11 DALFDJ020000006.1 tpg gene 76219 76857 . + . ID=gene-O5D79_001529;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=O5D79_001529 DALFDJ020000006.1 Protein Homology CDS 76219 76857 . + 0 ID=cds-HJH9163053.1;Parent=gene-O5D79_001529;Dbxref=NCBI_GP:HJH9163053.1;Name=HJH9163053.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463269.1;locus_tag=O5D79_001529;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=HJH9163053.1;transl_table=11 DALFDJ020000006.1 tpg gene 77040 78383 . + . ID=gene-O5D79_001530;Name=O5D79_001530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001530 DALFDJ020000006.1 Protein Homology CDS 77040 78383 . + 0 ID=cds-HJH9163054.1;Parent=gene-O5D79_001530;Dbxref=NCBI_GP:HJH9163054.1;Name=HJH9163054.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463268.1;locus_tag=O5D79_001530;product=hemolysin family protein;protein_id=HJH9163054.1;transl_table=11 DALFDJ020000006.1 tpg gene 78468 78674 . - . ID=gene-O5D79_001531;Name=O5D79_001531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001531 DALFDJ020000006.1 Protein Homology CDS 78468 78674 . - 0 ID=cds-HJH9163055.1;Parent=gene-O5D79_001531;Dbxref=NCBI_GP:HJH9163055.1;Name=HJH9163055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=O5D79_001531;product=DUF1107 domain-containing protein;protein_id=HJH9163055.1;transl_table=11 DALFDJ020000006.1 tpg gene 79001 79558 . + . ID=gene-O5D79_001532;Name=O5D79_001532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001532 DALFDJ020000006.1 Protein Homology CDS 79001 79558 . + 0 ID=cds-HJH9163056.1;Parent=gene-O5D79_001532;Dbxref=NCBI_GP:HJH9163056.1;Name=HJH9163056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463266.1;locus_tag=O5D79_001532;product=YtfJ family protein;protein_id=HJH9163056.1;transl_table=11 DALFDJ020000006.1 tpg gene 79548 80288 . - . ID=gene-O5D79_001533;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=O5D79_001533 DALFDJ020000006.1 Protein Homology CDS 79548 80288 . - 0 ID=cds-HJH9163057.1;Parent=gene-O5D79_001533;Dbxref=NCBI_GP:HJH9163057.1;Name=HJH9163057.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=O5D79_001533;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=HJH9163057.1;transl_table=11 DALFDJ020000006.1 tpg gene 80556 82499 . + . ID=gene-O5D79_001534;Name=O5D79_001534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001534 DALFDJ020000006.1 Protein Homology CDS 80556 82499 . + 0 ID=cds-HJH9163058.1;Parent=gene-O5D79_001534;Dbxref=NCBI_GP:HJH9163058.1;Name=HJH9163058.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=O5D79_001534;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=HJH9163058.1;transl_table=11 DALFDJ020000006.1 tpg gene 82557 82943 . - . ID=gene-O5D79_001535;Name=O5D79_001535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001535 DALFDJ020000006.1 Protein Homology CDS 82557 82943 . - 0 ID=cds-HJH9163059.1;Parent=gene-O5D79_001535;Dbxref=NCBI_GP:HJH9163059.1;Name=HJH9163059.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463263.1;locus_tag=O5D79_001535;product=winged helix-turn-helix transcriptional regulator;protein_id=HJH9163059.1;transl_table=11 DALFDJ020000006.1 tpg gene 83031 83879 . + . ID=gene-O5D79_001536;Name=O5D79_001536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001536 DALFDJ020000006.1 Protein Homology CDS 83031 83879 . + 0 ID=cds-HJH9163060.1;Parent=gene-O5D79_001536;Dbxref=NCBI_GP:HJH9163060.1;Name=HJH9163060.1;Ontology_term=GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463262.1;locus_tag=O5D79_001536;product=SDR family oxidoreductase;protein_id=HJH9163060.1;transl_table=11 DALFDJ020000006.1 tpg gene 83960 84925 . + . ID=gene-O5D79_001537;Name=O5D79_001537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001537 DALFDJ020000006.1 Protein Homology CDS 83960 84925 . + 0 ID=cds-HJH9163061.1;Parent=gene-O5D79_001537;Dbxref=NCBI_GP:HJH9163061.1;Name=HJH9163061.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463261.1;locus_tag=O5D79_001537;product=DMT family transporter;protein_id=HJH9163061.1;transl_table=11 DALFDJ020000006.1 tpg gene 85028 85690 . + . ID=gene-O5D79_001538;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=O5D79_001538 DALFDJ020000006.1 Protein Homology CDS 85028 85690 . + 0 ID=cds-HJH9163062.1;Parent=gene-O5D79_001538;Dbxref=NCBI_GP:HJH9163062.1;Name=HJH9163062.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463260.1;locus_tag=O5D79_001538;product=iron-sulfur cluster repair protein YtfE;protein_id=HJH9163062.1;transl_table=11 DALFDJ020000006.1 tpg gene 85802 87211 . - . ID=gene-O5D79_001539;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=O5D79_001539 DALFDJ020000006.1 Protein Homology CDS 85802 87211 . - 0 ID=cds-HJH9163063.1;Parent=gene-O5D79_001539;Dbxref=NCBI_GP:HJH9163063.1;Name=HJH9163063.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463259.1;locus_tag=O5D79_001539;product=D-serine/D-alanine/glycine transporter;protein_id=HJH9163063.1;transl_table=11 DALFDJ020000006.1 tpg gene 87507 88127 . - . ID=gene-O5D79_001540;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=O5D79_001540 DALFDJ020000006.1 Protein Homology CDS 87507 88127 . - 0 ID=cds-HJH9163064.1;Parent=gene-O5D79_001540;Dbxref=NCBI_GP:HJH9163064.1;Name=HJH9163064.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=O5D79_001540;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=HJH9163064.1;transl_table=11 DALFDJ020000006.1 tpg gene 88347 88982 . + . ID=gene-O5D79_001541;Name=O5D79_001541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001541 DALFDJ020000006.1 Protein Homology CDS 88347 88982 . + 0 ID=cds-HJH9163065.1;Parent=gene-O5D79_001541;Dbxref=NCBI_GP:HJH9163065.1;Name=HJH9163065.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463257.1;locus_tag=O5D79_001541;product=LysM-like peptidoglycan-binding domain-containing protein;protein_id=HJH9163065.1;transl_table=11 DALFDJ020000006.1 tpg gene 89032 89958 . - . ID=gene-O5D79_001542;Name=O5D79_001542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001542 DALFDJ020000006.1 Protein Homology CDS 89032 89958 . - 0 ID=cds-HJH9163066.1;Parent=gene-O5D79_001542;Dbxref=NCBI_GP:HJH9163066.1;Name=HJH9163066.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463256.1;locus_tag=O5D79_001542;product=DMT family transporter;protein_id=HJH9163066.1;transl_table=11 DALFDJ020000006.1 tpg gene 90106 90555 . - . ID=gene-O5D79_001543;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=O5D79_001543 DALFDJ020000006.1 Protein Homology CDS 90106 90555 . - 0 ID=cds-HJH9163067.1;Parent=gene-O5D79_001543;Dbxref=NCBI_GP:HJH9163067.1;Name=HJH9163067.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=O5D79_001543;product=50S ribosomal protein L9;protein_id=HJH9163067.1;transl_table=11 DALFDJ020000006.1 tpg gene 90597 90824 . - . ID=gene-O5D79_001544;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=O5D79_001544 DALFDJ020000006.1 Protein Homology CDS 90597 90824 . - 0 ID=cds-HJH9163068.1;Parent=gene-O5D79_001544;Dbxref=NCBI_GP:HJH9163068.1;Name=HJH9163068.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=O5D79_001544;product=30S ribosomal protein S18;protein_id=HJH9163068.1;transl_table=11 DALFDJ020000006.1 tpg gene 90829 91143 . - . ID=gene-O5D79_001545;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=O5D79_001545 DALFDJ020000006.1 Protein Homology CDS 90829 91143 . - 0 ID=cds-HJH9163069.1;Parent=gene-O5D79_001545;Dbxref=NCBI_GP:HJH9163069.1;Name=HJH9163069.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463253.1;locus_tag=O5D79_001545;product=primosomal replication protein N;protein_id=HJH9163069.1;transl_table=11 DALFDJ020000006.1 tpg gene 91150 91545 . - . ID=gene-O5D79_001546;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=O5D79_001546 DALFDJ020000006.1 Protein Homology CDS 91150 91545 . - 0 ID=cds-HJH9163070.1;Parent=gene-O5D79_001546;Dbxref=NCBI_GP:HJH9163070.1;Name=HJH9163070.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=O5D79_001546;product=30S ribosomal protein S6;protein_id=HJH9163070.1;transl_table=11 DALFDJ020000006.1 tpg gene 91932 92207 . + . ID=gene-O5D79_001547;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=O5D79_001547 DALFDJ020000006.1 Protein Homology CDS 91932 92207 . + 0 ID=cds-HJH9163071.1;Parent=gene-O5D79_001547;Dbxref=NCBI_GP:HJH9163071.1;Name=HJH9163071.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=O5D79_001547;product=DUF1471 family protein YjfY;protein_id=HJH9163071.1;transl_table=11 DALFDJ020000006.1 tpg gene 92261 92818 . - . ID=gene-O5D79_001548;Name=O5D79_001548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001548 DALFDJ020000006.1 Protein Homology CDS 92261 92818 . - 0 ID=cds-HJH9163072.1;Parent=gene-O5D79_001548;Dbxref=NCBI_GP:HJH9163072.1;Name=HJH9163072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006911310.1;locus_tag=O5D79_001548;product=YagU family protein;protein_id=HJH9163072.1;transl_table=11 DALFDJ020000006.1 tpg gene 92906 93592 . - . ID=gene-O5D79_001549;Name=O5D79_001549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001549 DALFDJ020000006.1 Protein Homology CDS 92906 93592 . - 0 ID=cds-HJH9163073.1;Parent=gene-O5D79_001549;Dbxref=NCBI_GP:HJH9163073.1;Name=HJH9163073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463249.1;locus_tag=O5D79_001549;product=L-ribulose-5-phosphate 4-epimerase;protein_id=HJH9163073.1;transl_table=11 DALFDJ020000006.1 tpg gene 93592 94446 . - . ID=gene-O5D79_001550;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=O5D79_001550 DALFDJ020000006.1 Protein Homology CDS 93592 94446 . - 0 ID=cds-HJH9163074.1;Parent=gene-O5D79_001550;Dbxref=NCBI_GP:HJH9163074.1;Name=HJH9163074.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463248.1;locus_tag=O5D79_001550;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=HJH9163074.1;transl_table=11 DALFDJ020000006.1 tpg gene 94456 95106 . - . ID=gene-O5D79_001551;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=O5D79_001551 DALFDJ020000006.1 Protein Homology CDS 94456 95106 . - 0 ID=cds-HJH9163075.1;Parent=gene-O5D79_001551;Dbxref=NCBI_GP:HJH9163075.1;Name=HJH9163075.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463247.1;locus_tag=O5D79_001551;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=HJH9163075.1;transl_table=11 DALFDJ020000006.1 tpg gene 95120 95584 . - . ID=gene-O5D79_001552;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=O5D79_001552 DALFDJ020000006.1 Protein Homology CDS 95120 95584 . - 0 ID=cds-HJH9163076.1;Parent=gene-O5D79_001552;Dbxref=NCBI_GP:HJH9163076.1;Name=HJH9163076.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463246.1;locus_tag=O5D79_001552;product=PTS ascorbate transporter subunit IIA;protein_id=HJH9163076.1;transl_table=11 DALFDJ020000006.1 tpg gene 95594 95899 . - . ID=gene-O5D79_001553;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=O5D79_001553 DALFDJ020000006.1 Protein Homology CDS 95594 95899 . - 0 ID=cds-HJH9163077.1;Parent=gene-O5D79_001553;Dbxref=NCBI_GP:HJH9163077.1;Name=HJH9163077.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313197.1;locus_tag=O5D79_001553;product=PTS ascorbate transporter subunit IIB;protein_id=HJH9163077.1;transl_table=11 DALFDJ020000006.1 tpg gene 95915 97312 . - . ID=gene-O5D79_001554;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=O5D79_001554 DALFDJ020000006.1 Protein Homology CDS 95915 97312 . - 0 ID=cds-HJH9163078.1;Parent=gene-O5D79_001554;Dbxref=NCBI_GP:HJH9163078.1;Name=HJH9163078.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=O5D79_001554;product=PTS ascorbate transporter subunit IIC;protein_id=HJH9163078.1;transl_table=11 DALFDJ020000006.1 tpg gene 97675 98739 . + . ID=gene-O5D79_001555;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=O5D79_001555 DALFDJ020000006.1 Protein Homology CDS 97675 98739 . + 0 ID=cds-HJH9163079.1;Parent=gene-O5D79_001555;Dbxref=NCBI_GP:HJH9163079.1;Name=HJH9163079.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=O5D79_001555;product=L-ascorbate 6-phosphate lactonase;protein_id=HJH9163079.1;transl_table=11 DALFDJ020000006.1 tpg gene 98844 99599 . + . ID=gene-O5D79_001556;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=O5D79_001556 DALFDJ020000006.1 Protein Homology CDS 98844 99599 . + 0 ID=cds-HJH9163080.1;Parent=gene-O5D79_001556;Dbxref=NCBI_GP:HJH9163080.1;Name=HJH9163080.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463242.1;locus_tag=O5D79_001556;product=HTH-type transcriptional regulator UlaR;protein_id=HJH9163080.1;transl_table=11 DALFDJ020000006.1 tpg gene 99596 100345 . - . ID=gene-O5D79_001557;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=O5D79_001557 DALFDJ020000006.1 Protein Homology CDS 99596 100345 . - 0 ID=cds-HJH9163081.1;Parent=gene-O5D79_001557;Dbxref=NCBI_GP:HJH9163081.1;Name=HJH9163081.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463241.1;locus_tag=O5D79_001557;product=esterase;protein_id=HJH9163081.1;transl_table=11 DALFDJ020000006.1 tpg gene 100529 100858 . + . ID=gene-O5D79_001558;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=O5D79_001558 DALFDJ020000006.1 Protein Homology CDS 100529 100858 . + 0 ID=cds-HJH9163082.1;Parent=gene-O5D79_001558;Dbxref=NCBI_GP:HJH9163082.1;Name=HJH9163082.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=O5D79_001558;product=biofilm peroxide resistance protein BsmA;protein_id=HJH9163082.1;transl_table=11 DALFDJ020000006.1 tpg gene 100989 101264 . + . ID=gene-O5D79_001559;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=O5D79_001559 DALFDJ020000006.1 Protein Homology CDS 100989 101264 . + 0 ID=cds-HJH9163083.1;Parent=gene-O5D79_001559;Dbxref=NCBI_GP:HJH9163083.1;Name=HJH9163083.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134428.1;locus_tag=O5D79_001559;product=DUF1471 family protease activator YjfN;protein_id=HJH9163083.1;transl_table=11 DALFDJ020000006.1 tpg gene 101309 102931 . - . ID=gene-O5D79_001560;Name=O5D79_001560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001560 DALFDJ020000006.1 Protein Homology CDS 101309 102931 . - 0 ID=cds-HJH9163084.1;Parent=gene-O5D79_001560;Dbxref=NCBI_GP:HJH9163084.1;Name=HJH9163084.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463238.3;locus_tag=O5D79_001560;product=isovaleryl-CoA dehydrogenase;protein_id=HJH9163084.1;transl_table=11 DALFDJ020000006.1 tpg gene 103016 104179 . - . ID=gene-O5D79_001561;Name=O5D79_001561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001561 DALFDJ020000006.1 Protein Homology CDS 103016 104179 . - 0 ID=cds-HJH9163085.1;Parent=gene-O5D79_001561;Dbxref=NCBI_GP:HJH9163085.1;Name=HJH9163085.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463237.1;locus_tag=O5D79_001561;product=glutathionylspermidine synthase family protein;protein_id=HJH9163085.1;transl_table=11 DALFDJ020000006.1 tpg gene 104182 104820 . - . ID=gene-O5D79_001562;Name=O5D79_001562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001562 DALFDJ020000006.1 Protein Homology CDS 104182 104820 . - 0 ID=cds-HJH9163086.1;Parent=gene-O5D79_001562;Dbxref=NCBI_GP:HJH9163086.1;Name=HJH9163086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463236.1;locus_tag=O5D79_001562;product=DUF1190 domain-containing protein;protein_id=HJH9163086.1;transl_table=11 DALFDJ020000006.1 tpg gene 104830 105228 . - . ID=gene-O5D79_001563;Name=O5D79_001563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001563 DALFDJ020000006.1 Protein Homology CDS 104830 105228 . - 0 ID=cds-HJH9163087.1;Parent=gene-O5D79_001563;Dbxref=NCBI_GP:HJH9163087.1;Name=HJH9163087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463235.1;locus_tag=O5D79_001563;product=DUF350 domain-containing protein;protein_id=HJH9163087.1;transl_table=11 DALFDJ020000006.1 tpg gene 105246 105929 . - . ID=gene-O5D79_001564;Name=O5D79_001564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001564 DALFDJ020000006.1 Protein Homology CDS 105246 105929 . - 0 ID=cds-HJH9163088.1;Parent=gene-O5D79_001564;Dbxref=NCBI_GP:HJH9163088.1;Name=HJH9163088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463234.3;locus_tag=O5D79_001564;product=YjfK family protein;protein_id=HJH9163088.1;transl_table=11 DALFDJ020000006.1 tpg pseudogene 106052 106153 . - . ID=gene-O5D79_001565;Name=O5D79_001565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001565;pseudo=true DALFDJ020000006.1 Protein Homology CDS 106052 106153 . - 0 ID=cds-O5D79_001565;Parent=gene-O5D79_001565;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463233.1;locus_tag=O5D79_001565;product=hypothetical protein;pseudo=true;transl_table=11 DALFDJ020000006.1 tpg gene 106153 106851 . - . ID=gene-O5D79_001566;Name=O5D79_001566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001566 DALFDJ020000006.1 Protein Homology CDS 106153 106851 . - 0 ID=cds-HJH9163089.1;Parent=gene-O5D79_001566;Dbxref=NCBI_GP:HJH9163089.1;Name=HJH9163089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463232.1;locus_tag=O5D79_001566;product=PspA/IM30 family protein;protein_id=HJH9163089.1;transl_table=11 DALFDJ020000006.1 tpg gene 106866 107270 . - . ID=gene-O5D79_001567;Name=O5D79_001567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001567 DALFDJ020000006.1 Protein Homology CDS 106866 107270 . - 0 ID=cds-HJH9163090.1;Parent=gene-O5D79_001567;Dbxref=NCBI_GP:HJH9163090.1;Name=HJH9163090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463231.1;locus_tag=O5D79_001567;product=YjfI family protein;protein_id=HJH9163090.1;transl_table=11 DALFDJ020000006.1 tpg gene 107402 108133 . - . ID=gene-O5D79_001568;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=O5D79_001568 DALFDJ020000006.1 Protein Homology CDS 107402 108133 . - 0 ID=cds-HJH9163091.1;Parent=gene-O5D79_001568;Dbxref=NCBI_GP:HJH9163091.1;Name=HJH9163091.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463230.1;locus_tag=O5D79_001568;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=HJH9163091.1;transl_table=11 DALFDJ020000006.1 tpg gene 108224 110662 . - . ID=gene-O5D79_001569;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=O5D79_001569 DALFDJ020000006.1 Protein Homology CDS 108224 110662 . - 0 ID=cds-HJH9163092.1;Parent=gene-O5D79_001569;Dbxref=NCBI_GP:HJH9163092.1;Name=HJH9163092.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463229.1;locus_tag=O5D79_001569;product=ribonuclease R;protein_id=HJH9163092.1;transl_table=11 DALFDJ020000006.1 tpg gene 110700 111125 . - . ID=gene-O5D79_001570;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=O5D79_001570 DALFDJ020000006.1 Protein Homology CDS 110700 111125 . - 0 ID=cds-HJH9163093.1;Parent=gene-O5D79_001570;Dbxref=NCBI_GP:HJH9163093.1;Name=HJH9163093.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=O5D79_001570;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=HJH9163093.1;transl_table=11 DALFDJ020000006.1 tpg gene 111332 112630 . - . ID=gene-O5D79_001571;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=O5D79_001571 DALFDJ020000006.1 Protein Homology CDS 111332 112630 . - 0 ID=cds-HJH9163094.1;Parent=gene-O5D79_001571;Dbxref=NCBI_GP:HJH9163094.1;Name=HJH9163094.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=O5D79_001571;product=adenylosuccinate synthase;protein_id=HJH9163094.1;transl_table=11 DALFDJ020000006.1 tpg gene 112733 112930 . - . ID=gene-O5D79_001572;Name=O5D79_001572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001572 DALFDJ020000006.1 Protein Homology CDS 112733 112930 . - 0 ID=cds-HJH9163095.1;Parent=gene-O5D79_001572;Dbxref=NCBI_GP:HJH9163095.1;Name=HJH9163095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463226.1;locus_tag=O5D79_001572;product=DUF2065 domain-containing protein;protein_id=HJH9163095.1;transl_table=11 DALFDJ020000006.1 tpg gene 113009 114013 . - . ID=gene-O5D79_001573;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=O5D79_001573 DALFDJ020000006.1 Protein Homology CDS 113009 114013 . - 0 ID=cds-HJH9163096.1;Parent=gene-O5D79_001573;Dbxref=NCBI_GP:HJH9163096.1;Name=HJH9163096.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463225.1;locus_tag=O5D79_001573;product=protease modulator HflC;protein_id=HJH9163096.1;transl_table=11 DALFDJ020000006.1 tpg gene 114016 115275 . - . ID=gene-O5D79_001574;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=O5D79_001574 DALFDJ020000006.1 Protein Homology CDS 114016 115275 . - 0 ID=cds-HJH9163097.1;Parent=gene-O5D79_001574;Dbxref=NCBI_GP:HJH9163097.1;Name=HJH9163097.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463224.1;locus_tag=O5D79_001574;product=FtsH protease activity modulator HflK;protein_id=HJH9163097.1;transl_table=11 DALFDJ020000006.1 tpg gene 115490 116770 . - . ID=gene-O5D79_001575;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=O5D79_001575 DALFDJ020000006.1 Protein Homology CDS 115490 116770 . - 0 ID=cds-HJH9163098.1;Parent=gene-O5D79_001575;Dbxref=NCBI_GP:HJH9163098.1;Name=HJH9163098.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463223.1;locus_tag=O5D79_001575;product=ribosome rescue GTPase HflX;protein_id=HJH9163098.1;transl_table=11 DALFDJ020000006.1 tpg gene 116842 117150 . - . ID=gene-O5D79_001576;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=O5D79_001576 DALFDJ020000006.1 Protein Homology CDS 116842 117150 . - 0 ID=cds-HJH9163099.1;Parent=gene-O5D79_001576;Dbxref=NCBI_GP:HJH9163099.1;Name=HJH9163099.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463222.1;locus_tag=O5D79_001576;product=RNA chaperone Hfq;protein_id=HJH9163099.1;transl_table=11 DALFDJ020000006.1 tpg gene 117233 118183 . - . ID=gene-O5D79_001577;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=O5D79_001577 DALFDJ020000006.1 Protein Homology CDS 117233 118183 . - 0 ID=cds-HJH9163100.1;Parent=gene-O5D79_001577;Dbxref=NCBI_GP:HJH9163100.1;Name=HJH9163100.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463221.1;locus_tag=O5D79_001577;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=HJH9163100.1;transl_table=11 DALFDJ020000006.1 tpg gene 118176 120032 . - . ID=gene-O5D79_001578;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=O5D79_001578 DALFDJ020000006.1 Protein Homology CDS 118176 120032 . - 0 ID=cds-HJH9163101.1;Parent=gene-O5D79_001578;Dbxref=NCBI_GP:HJH9163101.1;Name=HJH9163101.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463220.1;locus_tag=O5D79_001578;product=DNA mismatch repair endonuclease MutL;protein_id=HJH9163101.1;transl_table=11 DALFDJ020000006.1 tpg gene 120042 121364 . - . ID=gene-O5D79_001579;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=O5D79_001579 DALFDJ020000006.1 Protein Homology CDS 120042 121364 . - 0 ID=cds-HJH9163102.1;Parent=gene-O5D79_001579;Dbxref=NCBI_GP:HJH9163102.1;Name=HJH9163102.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463219.1;locus_tag=O5D79_001579;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=HJH9163102.1;transl_table=11 DALFDJ020000006.1 tpg gene 121381 121842 . - . ID=gene-O5D79_001580;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=O5D79_001580 DALFDJ020000006.1 Protein Homology CDS 121381 121842 . - 0 ID=cds-HJH9163103.1;Parent=gene-O5D79_001580;Dbxref=NCBI_GP:HJH9163103.1;Name=HJH9163103.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463218.1;locus_tag=O5D79_001580;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=HJH9163103.1;transl_table=11 DALFDJ020000006.1 tpg gene 121814 123361 . - . ID=gene-O5D79_001581;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=O5D79_001581 DALFDJ020000006.1 Protein Homology CDS 121814 123361 . - 0 ID=cds-HJH9163104.1;Parent=gene-O5D79_001581;Dbxref=NCBI_GP:HJH9163104.1;Name=HJH9163104.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463217.1;locus_tag=O5D79_001581;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=HJH9163104.1;transl_table=11 DALFDJ020000006.1 tpg gene 123360 124499 . + . ID=gene-O5D79_001582;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=O5D79_001582 DALFDJ020000006.1 Protein Homology CDS 123360 124499 . + 0 ID=cds-HJH9163105.1;Parent=gene-O5D79_001582;Dbxref=NCBI_GP:HJH9163105.1;Name=HJH9163105.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=O5D79_001582;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=HJH9163105.1;transl_table=11 DALFDJ020000006.1 tpg gene 124769 124844 . - . ID=gene-O5D79_001583;Name=O5D79_001583;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_001583 DALFDJ020000006.1 tRNAscan-SE tRNA 124769 124844 . - . ID=rna-O5D79_001583;Parent=gene-O5D79_001583;anticodon=(pos:complement(124809..124811));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001583;product=tRNA-Gly DALFDJ020000006.1 tRNAscan-SE exon 124769 124844 . - . ID=exon-O5D79_001583-1;Parent=rna-O5D79_001583;anticodon=(pos:complement(124809..124811));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001583;product=tRNA-Gly DALFDJ020000006.1 tpg gene 125001 125076 . - . ID=gene-O5D79_001584;Name=O5D79_001584;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_001584 DALFDJ020000006.1 tRNAscan-SE tRNA 125001 125076 . - . ID=rna-O5D79_001584;Parent=gene-O5D79_001584;anticodon=(pos:complement(125041..125043));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001584;product=tRNA-Gly DALFDJ020000006.1 tRNAscan-SE exon 125001 125076 . - . ID=exon-O5D79_001584-1;Parent=rna-O5D79_001584;anticodon=(pos:complement(125041..125043));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001584;product=tRNA-Gly DALFDJ020000006.1 tpg gene 125233 125308 . - . ID=gene-O5D79_001585;Name=O5D79_001585;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_001585 DALFDJ020000006.1 tRNAscan-SE tRNA 125233 125308 . - . ID=rna-O5D79_001585;Parent=gene-O5D79_001585;anticodon=(pos:complement(125273..125275));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001585;product=tRNA-Gly DALFDJ020000006.1 tRNAscan-SE exon 125233 125308 . - . ID=exon-O5D79_001585-1;Parent=rna-O5D79_001585;anticodon=(pos:complement(125273..125275));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001585;product=tRNA-Gly DALFDJ020000006.1 tpg gene 125584 126324 . + . ID=gene-O5D79_001586;Name=O5D79_001586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001586 DALFDJ020000006.1 Protein Homology CDS 125584 126324 . + 0 ID=cds-HJH9163106.1;Parent=gene-O5D79_001586;Dbxref=NCBI_GP:HJH9163106.1;Name=HJH9163106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463215.3;locus_tag=O5D79_001586;product=arginine ABC transporter substrate-binding protein;protein_id=HJH9163106.1;transl_table=11 DALFDJ020000006.1 tpg gene 126386 126931 . - . ID=gene-O5D79_001587;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=O5D79_001587 DALFDJ020000006.1 Protein Homology CDS 126386 126931 . - 0 ID=cds-HJH9163107.1;Parent=gene-O5D79_001587;Dbxref=NCBI_GP:HJH9163107.1;Name=HJH9163107.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=O5D79_001587;product=oligoribonuclease;protein_id=HJH9163107.1;transl_table=11 DALFDJ020000006.1 tpg gene 127038 128090 . + . ID=gene-O5D79_001588;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=O5D79_001588 DALFDJ020000006.1 Protein Homology CDS 127038 128090 . + 0 ID=cds-HJH9163108.1;Parent=gene-O5D79_001588;Dbxref=NCBI_GP:HJH9163108.1;Name=HJH9163108.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=O5D79_001588;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=HJH9163108.1;transl_table=11 DALFDJ020000006.1 tpg gene 128182 129150 . + . ID=gene-O5D79_001589;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=O5D79_001589 DALFDJ020000006.1 Protein Homology CDS 128182 129150 . + 0 ID=cds-HJH9163109.1;Parent=gene-O5D79_001589;Dbxref=NCBI_GP:HJH9163109.1;Name=HJH9163109.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463212.1;locus_tag=O5D79_001589;product=archaetidylserine decarboxylase;protein_id=HJH9163109.1;transl_table=11 DALFDJ020000006.1 tpg gene 129169 132495 . + . ID=gene-O5D79_001590;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=O5D79_001590 DALFDJ020000006.1 Protein Homology CDS 129169 132495 . + 0 ID=cds-HJH9163110.1;Parent=gene-O5D79_001590;Dbxref=NCBI_GP:HJH9163110.1;Name=HJH9163110.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463211.1;locus_tag=O5D79_001590;product=miniconductance mechanosensitive channel MscM;protein_id=HJH9163110.1;transl_table=11 DALFDJ020000006.1 tpg gene 132632 132952 . - . ID=gene-O5D79_001591;Name=O5D79_001591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001591 DALFDJ020000006.1 Protein Homology CDS 132632 132952 . - 0 ID=cds-HJH9163111.1;Parent=gene-O5D79_001591;Dbxref=NCBI_GP:HJH9163111.1;Name=HJH9163111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001682126.1;locus_tag=O5D79_001591;product=hypothetical protein;protein_id=HJH9163111.1;transl_table=11 DALFDJ020000006.1 tpg gene 133017 134519 . - . ID=gene-O5D79_001592;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=O5D79_001592 DALFDJ020000006.1 Protein Homology CDS 133017 134519 . - 0 ID=cds-HJH9163112.1;Parent=gene-O5D79_001592;Dbxref=NCBI_GP:HJH9163112.1;Name=HJH9163112.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463209.1;locus_tag=O5D79_001592;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=HJH9163112.1;transl_table=11 DALFDJ020000006.1 tpg gene 134745 135722 . - . ID=gene-O5D79_001593;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=O5D79_001593 DALFDJ020000006.1 Protein Homology CDS 134745 135722 . - 0 ID=cds-HJH9163113.1;Parent=gene-O5D79_001593;Dbxref=NCBI_GP:HJH9163113.1;Name=HJH9163113.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=O5D79_001593;product=elongation factor P--(R)-beta-lysine ligase;protein_id=HJH9163113.1;transl_table=11 DALFDJ020000006.1 tpg gene 136045 137835 . + . ID=gene-O5D79_001594;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=O5D79_001594 DALFDJ020000006.1 Protein Homology CDS 136045 137835 . + 0 ID=cds-HJH9163114.1;Parent=gene-O5D79_001594;Dbxref=NCBI_GP:HJH9163114.1;Name=HJH9163114.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463207.1;locus_tag=O5D79_001594;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=HJH9163114.1;transl_table=11 DALFDJ020000006.1 tpg gene 137828 138562 . + . ID=gene-O5D79_001595;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=O5D79_001595 DALFDJ020000006.1 Protein Homology CDS 137828 138562 . + 0 ID=cds-HJH9163115.1;Parent=gene-O5D79_001595;Dbxref=NCBI_GP:HJH9163115.1;Name=HJH9163115.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=O5D79_001595;product=fumarate reductase iron-sulfur protein;protein_id=HJH9163115.1;transl_table=11 DALFDJ020000006.1 tpg gene 138573 138968 . + . ID=gene-O5D79_001596;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=O5D79_001596 DALFDJ020000006.1 Protein Homology CDS 138573 138968 . + 0 ID=cds-HJH9163116.1;Parent=gene-O5D79_001596;Dbxref=NCBI_GP:HJH9163116.1;Name=HJH9163116.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463205.1;locus_tag=O5D79_001596;product=fumarate reductase subunit FrdC;protein_id=HJH9163116.1;transl_table=11 DALFDJ020000006.1 tpg gene 138979 139338 . + . ID=gene-O5D79_001597;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=O5D79_001597 DALFDJ020000006.1 Protein Homology CDS 138979 139338 . + 0 ID=cds-HJH9163117.1;Parent=gene-O5D79_001597;Dbxref=NCBI_GP:HJH9163117.1;Name=HJH9163117.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463204.1;locus_tag=O5D79_001597;product=fumarate reductase subunit FrdD;protein_id=HJH9163117.1;transl_table=11 DALFDJ020000006.1 tpg gene 139449 139982 . + . ID=gene-O5D79_001598;Name=O5D79_001598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001598 DALFDJ020000006.1 Protein Homology CDS 139449 139982 . + 0 ID=cds-HJH9163118.1;Parent=gene-O5D79_001598;Dbxref=NCBI_GP:HJH9163118.1;Name=HJH9163118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463203.1;locus_tag=O5D79_001598;product=lipocalin family protein;protein_id=HJH9163118.1;transl_table=11 DALFDJ020000006.1 tpg gene 139999 140316 . - . ID=gene-O5D79_001599;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=O5D79_001599 DALFDJ020000006.1 Protein Homology CDS 139999 140316 . - 0 ID=cds-HJH9163119.1;Parent=gene-O5D79_001599;Dbxref=NCBI_GP:HJH9163119.1;Name=HJH9163119.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463202.1;locus_tag=O5D79_001599;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=HJH9163119.1;transl_table=11 DALFDJ020000006.1 tpg gene 140515 140637 . + . ID=gene-O5D79_001600;Name=O5D79_001600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001600 DALFDJ020000006.1 GeneMarkS-2+ CDS 140515 140637 . + 0 ID=cds-HJH9163120.1;Parent=gene-O5D79_001600;Dbxref=NCBI_GP:HJH9163120.1;Name=HJH9163120.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_001600;product=hypothetical protein;protein_id=HJH9163120.1;transl_table=11 DALFDJ020000006.1 tpg gene 140621 141160 . + . ID=gene-O5D79_001601;Name=O5D79_001601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001601 DALFDJ020000006.1 Protein Homology CDS 140621 141160 . + 0 ID=cds-HJH9163121.1;Parent=gene-O5D79_001601;Dbxref=NCBI_GP:HJH9163121.1;Name=HJH9163121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001621742.1;locus_tag=O5D79_001601;product=helix-turn-helix domain-containing protein;protein_id=HJH9163121.1;transl_table=11 DALFDJ020000006.1 tpg gene 141191 141337 . - . ID=gene-O5D79_001602;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=O5D79_001602 DALFDJ020000006.1 Protein Homology CDS 141191 141337 . - 0 ID=cds-HJH9163122.1;Parent=gene-O5D79_001602;Dbxref=NCBI_GP:HJH9163122.1;Name=HJH9163122.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463200.1;locus_tag=O5D79_001602;product=lipoprotein toxin entericidin B;protein_id=HJH9163122.1;transl_table=11 DALFDJ020000006.1 tpg gene 141445 141579 . - . ID=gene-O5D79_001603;Name=O5D79_001603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001603 DALFDJ020000006.1 Protein Homology CDS 141445 141579 . - 0 ID=cds-HJH9163123.1;Parent=gene-O5D79_001603;Dbxref=NCBI_GP:HJH9163123.1;Name=HJH9163123.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=O5D79_001603;product=entericidin A/B family lipoprotein;protein_id=HJH9163123.1;transl_table=11 DALFDJ020000006.1 tpg gene 141640 142206 . - . ID=gene-O5D79_001604;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=O5D79_001604 DALFDJ020000006.1 Protein Homology CDS 141640 142206 . - 0 ID=cds-HJH9163124.1;Parent=gene-O5D79_001604;Dbxref=NCBI_GP:HJH9163124.1;Name=HJH9163124.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=O5D79_001604;product=elongation factor P;protein_id=HJH9163124.1;transl_table=11 DALFDJ020000006.1 tpg gene 142247 143275 . + . ID=gene-O5D79_001605;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=O5D79_001605 DALFDJ020000006.1 Protein Homology CDS 142247 143275 . + 0 ID=cds-HJH9163125.1;Parent=gene-O5D79_001605;Dbxref=NCBI_GP:HJH9163125.1;Name=HJH9163125.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463197.1;locus_tag=O5D79_001605;product=EF-P beta-lysylation protein EpmB;protein_id=HJH9163125.1;transl_table=11 DALFDJ020000006.1 tpg gene 143557 144414 . + . ID=gene-O5D79_001606;Name=O5D79_001606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001606 DALFDJ020000006.1 Protein Homology CDS 143557 144414 . + 0 ID=cds-HJH9163126.1;Parent=gene-O5D79_001606;Dbxref=NCBI_GP:HJH9163126.1;Name=HJH9163126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463196.1;locus_tag=O5D79_001606;product=YjeJ family protein;protein_id=HJH9163126.1;transl_table=11 DALFDJ020000006.1 tpg gene 144462 144815 . - . ID=gene-O5D79_001607;Name=O5D79_001607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001607 DALFDJ020000006.1 Protein Homology CDS 144462 144815 . - 0 ID=cds-HJH9163127.1;Parent=gene-O5D79_001607;Dbxref=NCBI_GP:HJH9163127.1;Name=HJH9163127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=O5D79_001607;product=DUF4156 domain-containing protein;protein_id=HJH9163127.1;transl_table=11 DALFDJ020000006.1 tpg gene 145059 146705 . - . ID=gene-O5D79_001608;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=O5D79_001608 DALFDJ020000006.1 Protein Homology CDS 145059 146705 . - 0 ID=cds-HJH9163128.1;Parent=gene-O5D79_001608;Dbxref=NCBI_GP:HJH9163128.1;Name=HJH9163128.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=O5D79_001608;product=chaperonin GroEL;protein_id=HJH9163128.1;transl_table=11 DALFDJ020000006.1 tpg gene 146749 147042 . - . ID=gene-O5D79_001609;Name=O5D79_001609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001609 DALFDJ020000006.1 Protein Homology CDS 146749 147042 . - 0 ID=cds-HJH9163129.1;Parent=gene-O5D79_001609;Dbxref=NCBI_GP:HJH9163129.1;Name=HJH9163129.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=O5D79_001609;product=co-chaperone GroES;protein_id=HJH9163129.1;transl_table=11 DALFDJ020000006.1 tpg gene 147318 148559 . + . ID=gene-O5D79_001610;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=O5D79_001610 DALFDJ020000006.1 Protein Homology CDS 147318 148559 . + 0 ID=cds-HJH9163130.1;Parent=gene-O5D79_001610;Dbxref=NCBI_GP:HJH9163130.1;Name=HJH9163130.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463192.1;locus_tag=O5D79_001610;product=L-methionine/branched-chain amino acid transporter;protein_id=HJH9163130.1;transl_table=11 DALFDJ020000006.1 tpg gene 148618 149094 . - . ID=gene-O5D79_001611;Name=O5D79_001611;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001611 DALFDJ020000006.1 Protein Homology CDS 148618 149094 . - 0 ID=cds-HJH9163131.1;Parent=gene-O5D79_001611;Dbxref=NCBI_GP:HJH9163131.1;Name=HJH9163131.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313148.1;locus_tag=O5D79_001611;product=FxsA family protein;protein_id=HJH9163131.1;transl_table=11 DALFDJ020000006.1 tpg gene 149435 150871 . + . ID=gene-O5D79_001612;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=O5D79_001612 DALFDJ020000006.1 Protein Homology CDS 149435 150871 . + 0 ID=cds-HJH9163132.1;Parent=gene-O5D79_001612;Dbxref=NCBI_GP:HJH9163132.1;Name=HJH9163132.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463190.1;locus_tag=O5D79_001612;product=aspartate ammonia-lyase;protein_id=HJH9163132.1;transl_table=11 DALFDJ020000006.1 tpg gene 150986 152287 . + . ID=gene-O5D79_001613;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=O5D79_001613 DALFDJ020000006.1 Protein Homology CDS 150986 152287 . + 0 ID=cds-HJH9163133.1;Parent=gene-O5D79_001613;Dbxref=NCBI_GP:HJH9163133.1;Name=HJH9163133.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=O5D79_001613;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=HJH9163133.1;transl_table=11 DALFDJ020000006.1 tpg gene 152408 152755 . + . ID=gene-O5D79_001614;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=O5D79_001614 DALFDJ020000006.1 Protein Homology CDS 152408 152755 . + 0 ID=cds-HJH9163134.1;Parent=gene-O5D79_001614;Dbxref=NCBI_GP:HJH9163134.1;Name=HJH9163134.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463188.1;locus_tag=O5D79_001614;product=divalent cation tolerance protein CutA;protein_id=HJH9163134.1;transl_table=11 DALFDJ020000006.1 tpg gene 152731 154434 . + . ID=gene-O5D79_001615;Name=O5D79_001615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001615 DALFDJ020000006.1 Protein Homology CDS 152731 154434 . + 0 ID=cds-HJH9163135.1;Parent=gene-O5D79_001615;Dbxref=NCBI_GP:HJH9163135.1;Name=HJH9163135.1;Ontology_term=GO:0017004,GO:0009055,GO:0030554,GO:0047134;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,adenyl nucleotide binding|0030554||IEA,protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=O5D79_001615;product=protein-disulfide reductase DsbD;protein_id=HJH9163135.1;transl_table=11 DALFDJ020000006.1 tpg gene 154471 155046 . + . ID=gene-O5D79_001616;Name=O5D79_001616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001616 DALFDJ020000006.1 Protein Homology CDS 154471 155046 . + 0 ID=cds-HJH9163136.1;Parent=gene-O5D79_001616;Dbxref=NCBI_GP:HJH9163136.1;Name=HJH9163136.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463186.1;locus_tag=O5D79_001616;product=transcriptional regulator;protein_id=HJH9163136.1;transl_table=11 DALFDJ020000006.1 tpg gene 155162 155237 . + . ID=gene-O5D79_001617;Name=O5D79_001617;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_001617 DALFDJ020000006.1 tRNAscan-SE tRNA 155162 155237 . + . ID=rna-O5D79_001617;Parent=gene-O5D79_001617;anticodon=(pos:155195..155197);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001617;product=tRNA-Phe DALFDJ020000006.1 tRNAscan-SE exon 155162 155237 . + . ID=exon-O5D79_001617-1;Parent=rna-O5D79_001617;anticodon=(pos:155195..155197);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001617;product=tRNA-Phe DALFDJ020000006.1 tpg gene 155399 156661 . + . ID=gene-O5D79_001618;Name=O5D79_001618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001618 DALFDJ020000006.1 Protein Homology CDS 155399 156661 . + 0 ID=cds-HJH9163137.1;Parent=gene-O5D79_001618;Dbxref=NCBI_GP:HJH9163137.1;Name=HJH9163137.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000954543.1;locus_tag=O5D79_001618;product=tyrosine-type recombinase/integrase;protein_id=HJH9163137.1;transl_table=11 DALFDJ020000006.1 tpg pseudogene 157257 157547 . - . ID=gene-O5D79_001619;Name=O5D79_001619;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001619;pseudo=true DALFDJ020000006.1 Protein Homology CDS 157257 157547 . - 0 ID=cds-O5D79_001619;Parent=gene-O5D79_001619;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000511772.1;locus_tag=O5D79_001619;product=integrase domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000006.1 tpg gene 157866 158303 . + . ID=gene-O5D79_001620;Name=O5D79_001620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001620 DALFDJ020000006.1 Protein Homology CDS 157866 158303 . + 0 ID=cds-HJH9163138.1;Parent=gene-O5D79_001620;Dbxref=NCBI_GP:HJH9163138.1;Name=HJH9163138.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534527.1;locus_tag=O5D79_001620;product=PTS sugar transporter subunit IIA;protein_id=HJH9163138.1;transl_table=11 DALFDJ020000006.1 tpg gene 158553 159200 . + . ID=gene-O5D79_001621;Name=O5D79_001621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001621 DALFDJ020000006.1 Protein Homology CDS 158553 159200 . + 0 ID=cds-HJH9163139.1;Parent=gene-O5D79_001621;Dbxref=NCBI_GP:HJH9163139.1;Name=HJH9163139.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000717815.1;locus_tag=O5D79_001621;product=HAD-IA family hydrolase;protein_id=HJH9163139.1;transl_table=11 DALFDJ020000006.1 tpg gene 159239 159997 . - . ID=gene-O5D79_001622;Name=O5D79_001622;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001622 DALFDJ020000006.1 Protein Homology CDS 159239 159997 . - 0 ID=cds-HJH9163140.1;Parent=gene-O5D79_001622;Dbxref=NCBI_GP:HJH9163140.1;Name=HJH9163140.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113733.1;locus_tag=O5D79_001622;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=HJH9163140.1;transl_table=11 DALFDJ020000006.1 tpg gene 160317 161189 . - . ID=gene-O5D79_001623;Name=O5D79_001623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001623 DALFDJ020000006.1 Protein Homology CDS 160317 161189 . - 0 ID=cds-HJH9163141.1;Parent=gene-O5D79_001623;Dbxref=NCBI_GP:HJH9163141.1;Name=HJH9163141.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000610756.1;locus_tag=O5D79_001623;product=helix-turn-helix transcriptional regulator;protein_id=HJH9163141.1;transl_table=11 DALFDJ020000006.1 tpg gene 161295 162710 . + . ID=gene-O5D79_001624;Name=O5D79_001624;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001624 DALFDJ020000006.1 Protein Homology CDS 161295 162710 . + 0 ID=cds-HJH9163142.1;Parent=gene-O5D79_001624;Dbxref=NCBI_GP:HJH9163142.1;Name=HJH9163142.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534558.1;locus_tag=O5D79_001624;product=MFS transporter;protein_id=HJH9163142.1;transl_table=11 DALFDJ020000006.1 tpg gene 163180 164064 . - . ID=gene-O5D79_001625;Name=O5D79_001625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001625 DALFDJ020000006.1 Protein Homology CDS 163180 164064 . - 0 ID=cds-HJH9163143.1;Parent=gene-O5D79_001625;Dbxref=NCBI_GP:HJH9163143.1;Name=HJH9163143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000605269.1;locus_tag=O5D79_001625;product=integrase domain-containing protein;protein_id=HJH9163143.1;transl_table=11 DALFDJ020000006.1 tpg gene 164886 165128 . + . ID=gene-O5D79_001626;Name=O5D79_001626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001626 DALFDJ020000006.1 Protein Homology CDS 164886 165128 . + 0 ID=cds-HJH9163144.1;Parent=gene-O5D79_001626;Dbxref=NCBI_GP:HJH9163144.1;Name=HJH9163144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000971973.1;locus_tag=O5D79_001626;product=metal-dependent hydrolase;protein_id=HJH9163144.1;transl_table=11 DALFDJ020000006.1 tpg gene 165215 166363 . - . ID=gene-O5D79_001627;Name=O5D79_001627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001627 DALFDJ020000006.1 Protein Homology CDS 165215 166363 . - 0 ID=cds-HJH9163145.1;Parent=gene-O5D79_001627;Dbxref=NCBI_GP:HJH9163145.1;Name=HJH9163145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019846362.1;locus_tag=O5D79_001627;product=PD-(D/E)XK nuclease family protein;protein_id=HJH9163145.1;transl_table=11 DALFDJ020000006.1 tpg gene 166371 172319 . - . ID=gene-O5D79_001628;Name=O5D79_001628;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001628 DALFDJ020000006.1 Protein Homology CDS 166371 172319 . - 0 ID=cds-HJH9163146.1;Parent=gene-O5D79_001628;Dbxref=NCBI_GP:HJH9163146.1;Name=HJH9163146.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001064274.1;locus_tag=O5D79_001628;product=DEAD/DEAH box helicase;protein_id=HJH9163146.1;transl_table=11 DALFDJ020000006.1 tpg gene 172334 175114 . - . ID=gene-O5D79_001629;Name=O5D79_001629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001629 DALFDJ020000006.1 Protein Homology CDS 172334 175114 . - 0 ID=cds-HJH9163147.1;Parent=gene-O5D79_001629;Dbxref=NCBI_GP:HJH9163147.1;Name=HJH9163147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001085178.1;locus_tag=O5D79_001629;product=kinetochore protein;protein_id=HJH9163147.1;transl_table=11 DALFDJ020000006.1 tpg gene 175150 177915 . - . ID=gene-O5D79_001630;Name=O5D79_001630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001630 DALFDJ020000006.1 Protein Homology CDS 175150 177915 . - 0 ID=cds-HJH9163148.1;Parent=gene-O5D79_001630;Dbxref=NCBI_GP:HJH9163148.1;Name=HJH9163148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915439.1;locus_tag=O5D79_001630;product=hypothetical protein;protein_id=HJH9163148.1;transl_table=11 DALFDJ020000006.1 tpg gene 177925 179010 . - . ID=gene-O5D79_001631;Name=O5D79_001631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001631 DALFDJ020000006.1 Protein Homology CDS 177925 179010 . - 0 ID=cds-HJH9163149.1;Parent=gene-O5D79_001631;Dbxref=NCBI_GP:HJH9163149.1;Name=HJH9163149.1;Ontology_term=GO:0006304,GO:0003677,GO:0003886,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA (cytosine-5-)-methyltransferase activity|0003886||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019846358.1;locus_tag=O5D79_001631;product=DNA cytosine methyltransferase;protein_id=HJH9163149.1;transl_table=11 DALFDJ020000006.1 tpg gene 179180 179674 . - . ID=gene-O5D79_001632;Name=O5D79_001632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001632 DALFDJ020000006.1 Protein Homology CDS 179180 179674 . - 0 ID=cds-HJH9163150.1;Parent=gene-O5D79_001632;Dbxref=NCBI_GP:HJH9163150.1;Name=HJH9163150.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622304.1;locus_tag=O5D79_001632;product=GNAT family N-acetyltransferase;protein_id=HJH9163150.1;transl_table=11 DALFDJ020000006.1 tpg gene 179671 179964 . - . ID=gene-O5D79_001633;Name=O5D79_001633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001633 DALFDJ020000006.1 Protein Homology CDS 179671 179964 . - 0 ID=cds-HJH9163151.1;Parent=gene-O5D79_001633;Dbxref=NCBI_GP:HJH9163151.1;Name=HJH9163151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228835.1;locus_tag=O5D79_001633;product=DUF1778 domain-containing protein;protein_id=HJH9163151.1;transl_table=11 DALFDJ020000006.1 tpg pseudogene 180288 180365 . - . ID=gene-O5D79_001634;Name=O5D79_001634;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001634;pseudo=true DALFDJ020000006.1 Protein Homology CDS 180288 180365 . - 0 ID=cds-O5D79_001634;Parent=gene-O5D79_001634;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193311.1;locus_tag=O5D79_001634;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000006.1 tpg gene 180919 181671 . + . ID=gene-O5D79_001635;Name=O5D79_001635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001635 DALFDJ020000006.1 Protein Homology CDS 180919 181671 . + 0 ID=cds-HJH9163152.1;Parent=gene-O5D79_001635;Dbxref=NCBI_GP:HJH9163152.1;Name=HJH9163152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463184.1;locus_tag=O5D79_001635;product=non-specific acid phosphatase;protein_id=HJH9163152.1;transl_table=11 DALFDJ020000006.1 tpg gene 181919 182410 . - . ID=gene-O5D79_001636;Name=O5D79_001636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001636 DALFDJ020000006.1 Protein Homology CDS 181919 182410 . - 0 ID=cds-HJH9163153.1;Parent=gene-O5D79_001636;Dbxref=NCBI_GP:HJH9163153.1;Name=HJH9163153.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463183.1;locus_tag=O5D79_001636;product=GNAT family N-acetyltransferase;protein_id=HJH9163153.1;transl_table=11 DALFDJ020000006.1 tpg gene 182407 182700 . - . ID=gene-O5D79_001637;Name=O5D79_001637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001637 DALFDJ020000006.1 Protein Homology CDS 182407 182700 . - 0 ID=cds-HJH9163154.1;Parent=gene-O5D79_001637;Dbxref=NCBI_GP:HJH9163154.1;Name=HJH9163154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463182.1;locus_tag=O5D79_001637;product=DUF1778 domain-containing protein;protein_id=HJH9163154.1;transl_table=11 DALFDJ020000006.1 tpg gene 183017 183238 . + . ID=gene-O5D79_001638;Name=O5D79_001638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001638 DALFDJ020000006.1 Protein Homology CDS 183017 183238 . + 0 ID=cds-HJH9163155.1;Parent=gene-O5D79_001638;Dbxref=NCBI_GP:HJH9163155.1;Name=HJH9163155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463181.1;locus_tag=O5D79_001638;product=hypothetical protein;protein_id=HJH9163155.1;transl_table=11 DALFDJ020000006.1 tpg gene 183502 184377 . + . ID=gene-O5D79_001639;Name=O5D79_001639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001639 DALFDJ020000006.1 Protein Homology CDS 183502 184377 . + 0 ID=cds-HJH9163156.1;Parent=gene-O5D79_001639;Dbxref=NCBI_GP:HJH9163156.1;Name=HJH9163156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463180.1;locus_tag=O5D79_001639;product=AraC family transcriptional regulator;protein_id=HJH9163156.1;transl_table=11 DALFDJ020000006.1 tpg gene 184374 184661 . + . ID=gene-O5D79_001640;Name=rtsB;gbkey=Gene;gene=rtsB;gene_biotype=protein_coding;locus_tag=O5D79_001640 DALFDJ020000006.1 Protein Homology CDS 184374 184661 . + 0 ID=cds-HJH9163157.1;Parent=gene-O5D79_001640;Dbxref=NCBI_GP:HJH9163157.1;Name=HJH9163157.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rtsB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463179.3;locus_tag=O5D79_001640;product=transcriptional regulator RtsB;protein_id=HJH9163157.1;transl_table=11 DALFDJ020000006.1 tpg gene 184637 184837 . - . ID=gene-O5D79_001641;Name=O5D79_001641;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001641 DALFDJ020000006.1 Protein Homology CDS 184637 184837 . - 0 ID=cds-HJH9163158.1;Parent=gene-O5D79_001641;Dbxref=NCBI_GP:HJH9163158.1;Name=HJH9163158.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.6;locus_tag=O5D79_001641;product=ATP-binding cassette domain-containing protein;protein_id=HJH9163158.1;transl_table=11 DALFDJ020000006.1 tpg pseudogene 184857 185059 . + . ID=gene-O5D79_001642;Name=O5D79_001642;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001642;pseudo=true DALFDJ020000006.1 Protein Homology CDS 184857 185059 . + 0 ID=cds-O5D79_001642;Parent=gene-O5D79_001642;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463178.1;locus_tag=O5D79_001642;product=hypothetical protein;pseudo=true;transl_table=11 DALFDJ020000006.1 tpg pseudogene 185067 185334 . + . ID=gene-O5D79_001643;Name=O5D79_001643;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001643;pseudo=true DALFDJ020000006.1 Protein Homology CDS 185067 185334 . + 0 ID=cds-O5D79_001643;Parent=gene-O5D79_001643;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463177.1;locus_tag=O5D79_001643;product=hypothetical protein;pseudo=true;transl_table=11 DALFDJ020000006.1 tpg gene 185629 186534 . - . ID=gene-O5D79_001644;Name=O5D79_001644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001644 DALFDJ020000006.1 Protein Homology CDS 185629 186534 . - 0 ID=cds-HJH9163159.1;Parent=gene-O5D79_001644;Dbxref=NCBI_GP:HJH9163159.1;Name=HJH9163159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463175.1;locus_tag=O5D79_001644;product=SdiA-regulated domain-containing protein;protein_id=HJH9163159.1;transl_table=11 DALFDJ020000006.1 tpg gene 186838 188238 . + . ID=gene-O5D79_001645;Name=O5D79_001645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001645 DALFDJ020000006.1 Protein Homology CDS 186838 188238 . + 0 ID=cds-HJH9163160.1;Parent=gene-O5D79_001645;Dbxref=NCBI_GP:HJH9163160.1;Name=HJH9163160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463174.1;locus_tag=O5D79_001645;product=DUF7594 domain-containing protein;protein_id=HJH9163160.1;transl_table=11 DALFDJ020000006.1 tpg gene 188322 188915 . - . ID=gene-O5D79_001646;Name=O5D79_001646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001646 DALFDJ020000006.1 Protein Homology CDS 188322 188915 . - 0 ID=cds-HJH9163161.1;Parent=gene-O5D79_001646;Dbxref=NCBI_GP:HJH9163161.1;Name=HJH9163161.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001629474.1;locus_tag=O5D79_001646;product=TorD/DmsD family molecular chaperone;protein_id=HJH9163161.1;transl_table=11 DALFDJ020000006.1 tpg gene 188991 189764 . - . ID=gene-O5D79_001647;Name=O5D79_001647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001647 DALFDJ020000006.1 Protein Homology CDS 188991 189764 . - 0 ID=cds-HJH9163162.1;Parent=gene-O5D79_001647;Dbxref=NCBI_GP:HJH9163162.1;Name=HJH9163162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463172.1;locus_tag=O5D79_001647;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=HJH9163162.1;transl_table=11 DALFDJ020000006.1 tpg gene 189757 190383 . - . ID=gene-O5D79_001648;Name=O5D79_001648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001648 DALFDJ020000006.1 Protein Homology CDS 189757 190383 . - 0 ID=cds-HJH9163163.1;Parent=gene-O5D79_001648;Dbxref=NCBI_GP:HJH9163163.1;Name=HJH9163163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463171.1;locus_tag=O5D79_001648;product=DMSO/selenate family reductase complex B subunit;protein_id=HJH9163163.1;transl_table=11 DALFDJ020000006.1 tpg gene 190397 192826 . - . ID=gene-O5D79_001649;Name=O5D79_001649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001649 DALFDJ020000006.1 Protein Homology CDS 190397 192826 . - 0 ID=cds-HJH9163164.1;Parent=gene-O5D79_001649;Dbxref=NCBI_GP:HJH9163164.1;Name=HJH9163164.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403483.1;locus_tag=O5D79_001649;product=DMSO/selenate family reductase complex A subunit;protein_id=HJH9163164.1;transl_table=11 DALFDJ020000006.1 tpg gene 193201 194832 . + . ID=gene-O5D79_001650;Name=O5D79_001650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001650 DALFDJ020000006.1 Protein Homology CDS 193201 194832 . + 0 ID=cds-HJH9163165.1;Parent=gene-O5D79_001650;Dbxref=NCBI_GP:HJH9163165.1;Name=HJH9163165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463169.1;locus_tag=O5D79_001650;product=sensor histidine kinase;protein_id=HJH9163165.1;transl_table=11 DALFDJ020000006.1 tpg gene 194829 195548 . + . ID=gene-O5D79_001651;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=O5D79_001651 DALFDJ020000006.1 Protein Homology CDS 194829 195548 . + 0 ID=cds-HJH9163166.1;Parent=gene-O5D79_001651;Dbxref=NCBI_GP:HJH9163166.1;Name=HJH9163166.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463168.1;locus_tag=O5D79_001651;product=two-component system response regulator DcuR;protein_id=HJH9163166.1;transl_table=11 DALFDJ020000006.1 tpg gene 195865 196131 . + . ID=gene-O5D79_001652;Name=O5D79_001652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001652 DALFDJ020000006.1 Protein Homology CDS 195865 196131 . + 0 ID=cds-HJH9163167.1;Parent=gene-O5D79_001652;Dbxref=NCBI_GP:HJH9163167.1;Name=HJH9163167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463167.1;locus_tag=O5D79_001652;product=hypothetical protein;protein_id=HJH9163167.1;transl_table=11 DALFDJ020000006.1 tpg gene 196278 197618 . + . ID=gene-O5D79_001653;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=O5D79_001653 DALFDJ020000006.1 Protein Homology CDS 196278 197618 . + 0 ID=cds-HJH9163168.1;Parent=gene-O5D79_001653;Dbxref=NCBI_GP:HJH9163168.1;Name=HJH9163168.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463166.1;locus_tag=O5D79_001653;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=HJH9163168.1;transl_table=11 DALFDJ020000006.1 tpg gene 197714 199360 . + . ID=gene-O5D79_001654;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=O5D79_001654 DALFDJ020000006.1 Protein Homology CDS 197714 199360 . + 0 ID=cds-HJH9163169.1;Parent=gene-O5D79_001654;Dbxref=NCBI_GP:HJH9163169.1;Name=HJH9163169.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463165.1;locus_tag=O5D79_001654;product=class I fumarate hydratase FumA;protein_id=HJH9163169.1;transl_table=11 DALFDJ020000006.1 tpg gene 199458 200888 . - . ID=gene-O5D79_001655;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=O5D79_001655 DALFDJ020000006.1 Protein Homology CDS 199458 200888 . - 0 ID=cds-HJH9163170.1;Parent=gene-O5D79_001655;Dbxref=NCBI_GP:HJH9163170.1;Name=HJH9163170.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463164.1;locus_tag=O5D79_001655;product=melibiose:sodium transporter MelB;protein_id=HJH9163170.1;transl_table=11 DALFDJ020000006.1 tpg gene 200972 202327 . - . ID=gene-O5D79_001656;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=O5D79_001656 DALFDJ020000006.1 Protein Homology CDS 200972 202327 . - 0 ID=cds-HJH9163171.1;Parent=gene-O5D79_001656;Dbxref=NCBI_GP:HJH9163171.1;Name=HJH9163171.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463163.1;locus_tag=O5D79_001656;product=alpha-galactosidase;protein_id=HJH9163171.1;transl_table=11 DALFDJ020000006.1 tpg gene 202596 203528 . + . ID=gene-O5D79_001657;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=O5D79_001657 DALFDJ020000006.1 Protein Homology CDS 202596 203528 . + 0 ID=cds-HJH9163172.1;Parent=gene-O5D79_001657;Dbxref=NCBI_GP:HJH9163172.1;Name=HJH9163172.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463162.1;locus_tag=O5D79_001657;product=transcriptional regulator MelR;protein_id=HJH9163172.1;transl_table=11 DALFDJ020000006.1 tpg gene 203761 206028 . + . ID=gene-O5D79_001658;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=O5D79_001658 DALFDJ020000006.1 Protein Homology CDS 203761 206028 . + 0 ID=cds-HJH9163173.1;Parent=gene-O5D79_001658;Dbxref=NCBI_GP:HJH9163173.1;Name=HJH9163173.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709824.2;locus_tag=O5D79_001658;product=arginine decarboxylase;protein_id=HJH9163173.1;transl_table=11 ##sequence-region DALFDJ020000007.1 1 191109 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000007.1 tpg region 1 191109 . + . ID=DALFDJ020000007.1:1..191109;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000007.1 tpg gene 528 1760 . - . ID=gene-O5D79_001659;Name=O5D79_001659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001659 DALFDJ020000007.1 Protein Homology CDS 528 1760 . - 0 ID=cds-HJH9163174.1;Parent=gene-O5D79_001659;Dbxref=NCBI_GP:HJH9163174.1;Name=HJH9163174.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309326.1;locus_tag=O5D79_001659;product=tyrosine-type recombinase/integrase;protein_id=HJH9163174.1;transl_table=11 DALFDJ020000007.1 tpg pseudogene 2393 2719 . + . ID=gene-O5D79_001660;Name=O5D79_001660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001660;pseudo=true DALFDJ020000007.1 Protein Homology CDS 2393 2719 . + 0 ID=cds-O5D79_001660;Parent=gene-O5D79_001660;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001124531.1;locus_tag=O5D79_001660;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 DALFDJ020000007.1 tpg gene 2908 3105 . + . ID=gene-O5D79_001661;Name=O5D79_001661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001661 DALFDJ020000007.1 Protein Homology CDS 2908 3105 . + 0 ID=cds-HJH9163175.1;Parent=gene-O5D79_001661;Dbxref=NCBI_GP:HJH9163175.1;Name=HJH9163175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111984.1;locus_tag=O5D79_001661;product=hypothetical protein;protein_id=HJH9163175.1;transl_table=11 DALFDJ020000007.1 tpg pseudogene 3299 4185 . + . ID=gene-O5D79_001662;Name=O5D79_001662;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001662;pseudo=true DALFDJ020000007.1 Protein Homology CDS 3299 4185 . + 0 ID=cds-O5D79_001662;Parent=gene-O5D79_001662;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343613.1;locus_tag=O5D79_001662;product=IS256 family transposase;pseudo=true;transl_table=11 DALFDJ020000007.1 tpg gene 4165 4359 . + . ID=gene-O5D79_001663;Name=O5D79_001663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001663 DALFDJ020000007.1 GeneMarkS-2+ CDS 4165 4359 . + 0 ID=cds-HJH9163176.1;Parent=gene-O5D79_001663;Dbxref=NCBI_GP:HJH9163176.1;Name=HJH9163176.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_001663;product=hypothetical protein;protein_id=HJH9163176.1;transl_table=11 DALFDJ020000007.1 tpg gene 4379 4855 . + . ID=gene-O5D79_001664;Name=O5D79_001664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001664 DALFDJ020000007.1 Protein Homology CDS 4379 4855 . + 0 ID=cds-HJH9163177.1;Parent=gene-O5D79_001664;Dbxref=NCBI_GP:HJH9163177.1;Name=HJH9163177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747668.1;locus_tag=O5D79_001664;product=adhesin;protein_id=HJH9163177.1;transl_table=11 DALFDJ020000007.1 tpg gene 5353 7629 . - . ID=gene-O5D79_001665;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=O5D79_001665 DALFDJ020000007.1 Protein Homology CDS 5353 7629 . - 0 ID=cds-HJH9163178.1;Parent=gene-O5D79_001665;Dbxref=NCBI_GP:HJH9163178.1;Name=HJH9163178.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459922.1;locus_tag=O5D79_001665;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=HJH9163178.1;transl_table=11 DALFDJ020000007.1 tpg gene 7660 7980 . - . ID=gene-O5D79_001666;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=O5D79_001666 DALFDJ020000007.1 Protein Homology CDS 7660 7980 . - 0 ID=cds-HJH9163179.1;Parent=gene-O5D79_001666;Dbxref=NCBI_GP:HJH9163179.1;Name=HJH9163179.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=O5D79_001666;product=ATP-dependent Clp protease adapter ClpS;protein_id=HJH9163179.1;transl_table=11 DALFDJ020000007.1 tpg gene 8076 8153 . - . ID=gene-O5D79_001667;Name=O5D79_001667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001667 DALFDJ020000007.1 Protein Homology CDS 8076 8153 . - 0 ID=cds-HJH9163180.1;Parent=gene-O5D79_001667;Dbxref=NCBI_GP:HJH9163180.1;Name=HJH9163180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=O5D79_001667;product=hypothetical protein;protein_id=HJH9163180.1;transl_table=11 DALFDJ020000007.1 tpg gene 8304 8525 . + . ID=gene-O5D79_001668;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=O5D79_001668 DALFDJ020000007.1 Protein Homology CDS 8304 8525 . + 0 ID=cds-HJH9163181.1;Parent=gene-O5D79_001668;Dbxref=NCBI_GP:HJH9163181.1;Name=HJH9163181.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=O5D79_001668;product=cold shock-like protein CspD;protein_id=HJH9163181.1;transl_table=11 DALFDJ020000007.1 tpg gene 8655 10601 . - . ID=gene-O5D79_001669;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=O5D79_001669 DALFDJ020000007.1 Protein Homology CDS 8655 10601 . - 0 ID=cds-HJH9163182.1;Parent=gene-O5D79_001669;Dbxref=NCBI_GP:HJH9163182.1;Name=HJH9163182.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459919.1;locus_tag=O5D79_001669;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=HJH9163182.1;transl_table=11 DALFDJ020000007.1 tpg gene 10598 11716 . - . ID=gene-O5D79_001670;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=O5D79_001670 DALFDJ020000007.1 Protein Homology CDS 10598 11716 . - 0 ID=cds-HJH9163183.1;Parent=gene-O5D79_001670;Dbxref=NCBI_GP:HJH9163183.1;Name=HJH9163183.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459918.1;locus_tag=O5D79_001670;product=macrolide transporter subunit MacA;protein_id=HJH9163183.1;transl_table=11 DALFDJ020000007.1 tpg gene 11862 12812 . + . ID=gene-O5D79_001671;Name=O5D79_001671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001671 DALFDJ020000007.1 Protein Homology CDS 11862 12812 . + 0 ID=cds-HJH9163184.1;Parent=gene-O5D79_001671;Dbxref=NCBI_GP:HJH9163184.1;Name=HJH9163184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001519667.1;locus_tag=O5D79_001671;product=VirK/YbjX family protein;protein_id=HJH9163184.1;transl_table=11 DALFDJ020000007.1 tpg gene 12809 14467 . - . ID=gene-O5D79_001672;Name=O5D79_001672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001672 DALFDJ020000007.1 Protein Homology CDS 12809 14467 . - 0 ID=cds-HJH9163185.1;Parent=gene-O5D79_001672;Dbxref=NCBI_GP:HJH9163185.1;Name=HJH9163185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459916.2;locus_tag=O5D79_001672;product=ATP-dependent endonuclease;protein_id=HJH9163185.1;transl_table=11 DALFDJ020000007.1 tpg gene 14669 15568 . + . ID=gene-O5D79_001673;Name=O5D79_001673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001673 DALFDJ020000007.1 Protein Homology CDS 14669 15568 . + 0 ID=cds-HJH9163186.1;Parent=gene-O5D79_001673;Dbxref=NCBI_GP:HJH9163186.1;Name=HJH9163186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=O5D79_001673;product=lysine exporter LysO family protein;protein_id=HJH9163186.1;transl_table=11 DALFDJ020000007.1 tpg gene 15712 17364 . + . ID=gene-O5D79_001674;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=O5D79_001674 DALFDJ020000007.1 Protein Homology CDS 15712 17364 . + 0 ID=cds-HJH9163187.1;Parent=gene-O5D79_001674;Dbxref=NCBI_GP:HJH9163187.1;Name=HJH9163187.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=O5D79_001674;product=hydroxylamine reductase;protein_id=HJH9163187.1;transl_table=11 DALFDJ020000007.1 tpg gene 17376 18344 . + . ID=gene-O5D79_001675;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=O5D79_001675 DALFDJ020000007.1 Protein Homology CDS 17376 18344 . + 0 ID=cds-HJH9163188.1;Parent=gene-O5D79_001675;Dbxref=NCBI_GP:HJH9163188.1;Name=HJH9163188.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=O5D79_001675;product=NADH oxidoreductase;protein_id=HJH9163188.1;transl_table=11 DALFDJ020000007.1 tpg gene 18502 20220 . + . ID=gene-O5D79_001676;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=O5D79_001676 DALFDJ020000007.1 Protein Homology CDS 18502 20220 . + 0 ID=cds-HJH9163189.1;Parent=gene-O5D79_001676;Dbxref=NCBI_GP:HJH9163189.1;Name=HJH9163189.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459912.1;locus_tag=O5D79_001676;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=HJH9163189.1;transl_table=11 DALFDJ020000007.1 tpg gene 20259 21260 . + . ID=gene-O5D79_001677;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=O5D79_001677 DALFDJ020000007.1 Protein Homology CDS 20259 21260 . + 0 ID=cds-HJH9163190.1;Parent=gene-O5D79_001677;Dbxref=NCBI_GP:HJH9163190.1;Name=HJH9163190.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459911.1;locus_tag=O5D79_001677;product=low-specificity L-threonine aldolase;protein_id=HJH9163190.1;transl_table=11 DALFDJ020000007.1 tpg gene 21271 22704 . + . ID=gene-O5D79_001678;Name=O5D79_001678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001678 DALFDJ020000007.1 Protein Homology CDS 21271 22704 . + 0 ID=cds-HJH9163191.1;Parent=gene-O5D79_001678;Dbxref=NCBI_GP:HJH9163191.1;Name=HJH9163191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459910.1;locus_tag=O5D79_001678;product=DUF2867 domain-containing protein;protein_id=HJH9163191.1;transl_table=11 DALFDJ020000007.1 tpg gene 22800 23813 . + . ID=gene-O5D79_001679;Name=O5D79_001679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001679 DALFDJ020000007.1 Protein Homology CDS 22800 23813 . + 0 ID=cds-HJH9163192.1;Parent=gene-O5D79_001679;Dbxref=NCBI_GP:HJH9163192.1;Name=HJH9163192.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459909.1;locus_tag=O5D79_001679;product=NAD-dependent epimerase/dehydratase family protein;protein_id=HJH9163192.1;transl_table=11 DALFDJ020000007.1 tpg gene 23810 24640 . - . ID=gene-O5D79_001680;Name=O5D79_001680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001680 DALFDJ020000007.1 Protein Homology CDS 23810 24640 . - 0 ID=cds-HJH9163193.1;Parent=gene-O5D79_001680;Dbxref=NCBI_GP:HJH9163193.1;Name=HJH9163193.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745,GO:0042834,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459908.1;locus_tag=O5D79_001680;product=N-acetylmuramoyl-L-alanine amidase;protein_id=HJH9163193.1;transl_table=11 DALFDJ020000007.1 tpg gene 24637 24960 . - . ID=gene-O5D79_001681;Name=O5D79_001681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001681 DALFDJ020000007.1 Protein Homology CDS 24637 24960 . - 0 ID=cds-HJH9163194.1;Parent=gene-O5D79_001681;Dbxref=NCBI_GP:HJH9163194.1;Name=HJH9163194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=O5D79_001681;product=heavy metal-binding domain-containing protein;protein_id=HJH9163194.1;transl_table=11 DALFDJ020000007.1 tpg gene 25088 25603 . + . ID=gene-O5D79_001682;Name=O5D79_001682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001682 DALFDJ020000007.1 Protein Homology CDS 25088 25603 . + 0 ID=cds-HJH9163195.1;Parent=gene-O5D79_001682;Dbxref=NCBI_GP:HJH9163195.1;Name=HJH9163195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459868.1;locus_tag=O5D79_001682;product=lipoprotein;protein_id=HJH9163195.1;transl_table=11 DALFDJ020000007.1 tpg gene 25833 26561 . + . ID=gene-O5D79_001683;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=O5D79_001683 DALFDJ020000007.1 Protein Homology CDS 25833 26561 . + 0 ID=cds-HJH9163196.1;Parent=gene-O5D79_001683;Dbxref=NCBI_GP:HJH9163196.1;Name=HJH9163196.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=O5D79_001683;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=HJH9163196.1;transl_table=11 DALFDJ020000007.1 tpg gene 26579 27310 . + . ID=gene-O5D79_001684;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=O5D79_001684 DALFDJ020000007.1 Protein Homology CDS 26579 27310 . + 0 ID=cds-HJH9163197.1;Parent=gene-O5D79_001684;Dbxref=NCBI_GP:HJH9163197.1;Name=HJH9163197.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459866.1;locus_tag=O5D79_001684;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=HJH9163197.1;transl_table=11 DALFDJ020000007.1 tpg gene 27317 28033 . + . ID=gene-O5D79_001685;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=O5D79_001685 DALFDJ020000007.1 Protein Homology CDS 27317 28033 . + 0 ID=cds-HJH9163198.1;Parent=gene-O5D79_001685;Dbxref=NCBI_GP:HJH9163198.1;Name=HJH9163198.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459865.1;locus_tag=O5D79_001685;product=arginine ABC transporter permease ArtQ;protein_id=HJH9163198.1;transl_table=11 DALFDJ020000007.1 tpg gene 28033 28701 . + . ID=gene-O5D79_001686;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=O5D79_001686 DALFDJ020000007.1 Protein Homology CDS 28033 28701 . + 0 ID=cds-HJH9163199.1;Parent=gene-O5D79_001686;Dbxref=NCBI_GP:HJH9163199.1;Name=HJH9163199.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459864.1;locus_tag=O5D79_001686;product=arginine ABC transporter permease ArtM;protein_id=HJH9163199.1;transl_table=11 DALFDJ020000007.1 tpg gene 28938 29669 . + . ID=gene-O5D79_001687;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=O5D79_001687 DALFDJ020000007.1 Protein Homology CDS 28938 29669 . + 0 ID=cds-HJH9163200.1;Parent=gene-O5D79_001687;Dbxref=NCBI_GP:HJH9163200.1;Name=HJH9163200.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459863.1;locus_tag=O5D79_001687;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=HJH9163200.1;transl_table=11 DALFDJ020000007.1 tpg gene 29888 31375 . - . ID=gene-O5D79_001688;Name=O5D79_001688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001688 DALFDJ020000007.1 Protein Homology CDS 29888 31375 . - 0 ID=cds-HJH9163201.1;Parent=gene-O5D79_001688;Dbxref=NCBI_GP:HJH9163201.1;Name=HJH9163201.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459862.1;locus_tag=O5D79_001688;product=sulfatase;protein_id=HJH9163201.1;transl_table=11 DALFDJ020000007.1 tpg gene 31385 31705 . - . ID=gene-O5D79_001689;Name=O5D79_001689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001689 DALFDJ020000007.1 Protein Homology CDS 31385 31705 . - 0 ID=cds-HJH9163202.1;Parent=gene-O5D79_001689;Dbxref=NCBI_GP:HJH9163202.1;Name=HJH9163202.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459861.1;locus_tag=O5D79_001689;product=PTS sugar transporter subunit IIB;protein_id=HJH9163202.1;transl_table=11 DALFDJ020000007.1 tpg gene 31735 33078 . - . ID=gene-O5D79_001690;Name=O5D79_001690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001690 DALFDJ020000007.1 Protein Homology CDS 31735 33078 . - 0 ID=cds-HJH9163203.1;Parent=gene-O5D79_001690;Dbxref=NCBI_GP:HJH9163203.1;Name=HJH9163203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459860.1;locus_tag=O5D79_001690;product=PTS sugar transporter subunit IIC;protein_id=HJH9163203.1;transl_table=11 DALFDJ020000007.1 tpg gene 33373 34500 . - . ID=gene-O5D79_001691;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=O5D79_001691 DALFDJ020000007.1 Protein Homology CDS 33373 34500 . - 0 ID=cds-HJH9163204.1;Parent=gene-O5D79_001691;Dbxref=NCBI_GP:HJH9163204.1;Name=HJH9163204.1;Ontology_term=GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001149796.1;locus_tag=O5D79_001691;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=HJH9163204.1;transl_table=11 DALFDJ020000007.1 tpg gene 34543 35016 . - . ID=gene-O5D79_001692;Name=O5D79_001692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001692 DALFDJ020000007.1 Protein Homology CDS 34543 35016 . - 0 ID=cds-HJH9163205.1;Parent=gene-O5D79_001692;Dbxref=NCBI_GP:HJH9163205.1;Name=HJH9163205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459858.1;locus_tag=O5D79_001692;product=YbjO family protein;protein_id=HJH9163205.1;transl_table=11 DALFDJ020000007.1 tpg gene 35090 35935 . - . ID=gene-O5D79_001693;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=O5D79_001693 DALFDJ020000007.1 Protein Homology CDS 35090 35935 . - 0 ID=cds-HJH9163206.1;Parent=gene-O5D79_001693;Dbxref=NCBI_GP:HJH9163206.1;Name=HJH9163206.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=O5D79_001693;product=putrescine ABC transporter permease PotI;protein_id=HJH9163206.1;transl_table=11 DALFDJ020000007.1 tpg gene 35932 36885 . - . ID=gene-O5D79_001694;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=O5D79_001694 DALFDJ020000007.1 Protein Homology CDS 35932 36885 . - 0 ID=cds-HJH9163207.1;Parent=gene-O5D79_001694;Dbxref=NCBI_GP:HJH9163207.1;Name=HJH9163207.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=O5D79_001694;product=putrescine ABC transporter permease PotH;protein_id=HJH9163207.1;transl_table=11 DALFDJ020000007.1 tpg gene 36895 38028 . - . ID=gene-O5D79_001695;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=O5D79_001695 DALFDJ020000007.1 Protein Homology CDS 36895 38028 . - 0 ID=cds-HJH9163208.1;Parent=gene-O5D79_001695;Dbxref=NCBI_GP:HJH9163208.1;Name=HJH9163208.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=O5D79_001695;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=HJH9163208.1;transl_table=11 DALFDJ020000007.1 tpg gene 38116 39228 . - . ID=gene-O5D79_001696;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=O5D79_001696 DALFDJ020000007.1 Protein Homology CDS 38116 39228 . - 0 ID=cds-HJH9163209.1;Parent=gene-O5D79_001696;Dbxref=NCBI_GP:HJH9163209.1;Name=HJH9163209.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459854.1;locus_tag=O5D79_001696;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=HJH9163209.1;transl_table=11 DALFDJ020000007.1 tpg gene 39577 40053 . - . ID=gene-O5D79_001697;Name=O5D79_001697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001697 DALFDJ020000007.1 Protein Homology CDS 39577 40053 . - 0 ID=cds-HJH9163210.1;Parent=gene-O5D79_001697;Dbxref=NCBI_GP:HJH9163210.1;Name=HJH9163210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459853.1;locus_tag=O5D79_001697;product=YbjN domain-containing protein;protein_id=HJH9163210.1;transl_table=11 DALFDJ020000007.1 tpg gene 40150 41052 . - . ID=gene-O5D79_001698;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=O5D79_001698 DALFDJ020000007.1 Protein Homology CDS 40150 41052 . - 0 ID=cds-HJH9163211.1;Parent=gene-O5D79_001698;Dbxref=NCBI_GP:HJH9163211.1;Name=HJH9163211.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459852.1;locus_tag=O5D79_001698;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=HJH9163211.1;transl_table=11 DALFDJ020000007.1 tpg gene 41110 41832 . - . ID=gene-O5D79_001699;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=O5D79_001699 DALFDJ020000007.1 Protein Homology CDS 41110 41832 . - 0 ID=cds-HJH9163212.1;Parent=gene-O5D79_001699;Dbxref=NCBI_GP:HJH9163212.1;Name=HJH9163212.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459851.1;locus_tag=O5D79_001699;product=nitroreductase NfsA;protein_id=HJH9163212.1;transl_table=11 DALFDJ020000007.1 tpg gene 41816 42106 . - . ID=gene-O5D79_001700;Name=O5D79_001700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001700 DALFDJ020000007.1 Protein Homology CDS 41816 42106 . - 0 ID=cds-HJH9163213.1;Parent=gene-O5D79_001700;Dbxref=NCBI_GP:HJH9163213.1;Name=HJH9163213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459850.1;locus_tag=O5D79_001700;product=YbjC family protein;protein_id=HJH9163213.1;transl_table=11 DALFDJ020000007.1 tpg gene 42276 42539 . + . ID=gene-O5D79_001701;Name=O5D79_001701;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001701 DALFDJ020000007.1 Protein Homology CDS 42276 42539 . + 0 ID=cds-HJH9163214.1;Parent=gene-O5D79_001701;Dbxref=NCBI_GP:HJH9163214.1;Name=HJH9163214.1;Ontology_term=GO:0045454,GO:0009055,GO:0015035;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459849.1;locus_tag=O5D79_001701;product=GrxA family glutaredoxin;protein_id=HJH9163214.1;transl_table=11 DALFDJ020000007.1 tpg gene 42571 42948 . - . ID=gene-O5D79_001702;Name=O5D79_001702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001702 DALFDJ020000007.1 Protein Homology CDS 42571 42948 . - 0 ID=cds-HJH9163215.1;Parent=gene-O5D79_001702;Dbxref=NCBI_GP:HJH9163215.1;Name=HJH9163215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459848.1;locus_tag=O5D79_001702;product=inner membrane protein YbjM;protein_id=HJH9163215.1;transl_table=11 DALFDJ020000007.1 tpg gene 43219 44904 . + . ID=gene-O5D79_001703;Name=O5D79_001703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001703 DALFDJ020000007.1 Protein Homology CDS 43219 44904 . + 0 ID=cds-HJH9163216.1;Parent=gene-O5D79_001703;Dbxref=NCBI_GP:HJH9163216.1;Name=HJH9163216.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=O5D79_001703;product=aspartate:alanine antiporter;protein_id=HJH9163216.1;transl_table=11 DALFDJ020000007.1 tpg gene 45021 45641 . - . ID=gene-O5D79_001704;Name=O5D79_001704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001704 DALFDJ020000007.1 Protein Homology CDS 45021 45641 . - 0 ID=cds-HJH9163217.1;Parent=gene-O5D79_001704;Dbxref=NCBI_GP:HJH9163217.1;Name=HJH9163217.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459846.1;locus_tag=O5D79_001704;product=TetR/AcrR family transcriptional regulator;protein_id=HJH9163217.1;transl_table=11 DALFDJ020000007.1 tpg gene 45809 47020 . + . ID=gene-O5D79_001705;Name=O5D79_001705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001705 DALFDJ020000007.1 Protein Homology CDS 45809 47020 . + 0 ID=cds-HJH9163218.1;Parent=gene-O5D79_001705;Dbxref=NCBI_GP:HJH9163218.1;Name=HJH9163218.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459845.1;locus_tag=O5D79_001705;product=MFS transporter;protein_id=HJH9163218.1;transl_table=11 DALFDJ020000007.1 tpg gene 47017 47832 . + . ID=gene-O5D79_001706;Name=O5D79_001706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001706 DALFDJ020000007.1 Protein Homology CDS 47017 47832 . + 0 ID=cds-HJH9163219.1;Parent=gene-O5D79_001706;Dbxref=NCBI_GP:HJH9163219.1;Name=HJH9163219.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459844.1;locus_tag=O5D79_001706;product=Cof-type HAD-IIB family hydrolase;protein_id=HJH9163219.1;transl_table=11 DALFDJ020000007.1 tpg gene 47886 49118 . - . ID=gene-O5D79_001707;Name=O5D79_001707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001707 DALFDJ020000007.1 Protein Homology CDS 47886 49118 . - 0 ID=cds-HJH9163220.1;Parent=gene-O5D79_001707;Dbxref=NCBI_GP:HJH9163220.1;Name=HJH9163220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459843.1;locus_tag=O5D79_001707;product=MFS transporter;protein_id=HJH9163220.1;transl_table=11 DALFDJ020000007.1 tpg gene 49431 50039 . + . ID=gene-O5D79_001708;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=O5D79_001708 DALFDJ020000007.1 Protein Homology CDS 49431 50039 . + 0 ID=cds-HJH9163221.1;Parent=gene-O5D79_001708;Dbxref=NCBI_GP:HJH9163221.1;Name=HJH9163221.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459842.1;locus_tag=O5D79_001708;product=undecaprenyl-diphosphate phosphatase;protein_id=HJH9163221.1;transl_table=11 DALFDJ020000007.1 tpg gene 50111 50869 . + . ID=gene-O5D79_001709;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=O5D79_001709 DALFDJ020000007.1 Protein Homology CDS 50111 50869 . + 0 ID=cds-HJH9163222.1;Parent=gene-O5D79_001709;Dbxref=NCBI_GP:HJH9163222.1;Name=HJH9163222.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459841.1;locus_tag=O5D79_001709;product=DNA-binding transcriptional repressor DeoR;protein_id=HJH9163222.1;transl_table=11 DALFDJ020000007.1 tpg gene 50915 52117 . - . ID=gene-O5D79_001710;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=O5D79_001710 DALFDJ020000007.1 Protein Homology CDS 50915 52117 . - 0 ID=cds-HJH9163223.1;Parent=gene-O5D79_001710;Dbxref=NCBI_GP:HJH9163223.1;Name=HJH9163223.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459840.1;locus_tag=O5D79_001710;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=HJH9163223.1;transl_table=11 DALFDJ020000007.1 tpg gene 52361 52987 . + . ID=gene-O5D79_001711;Name=O5D79_001711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001711 DALFDJ020000007.1 Protein Homology CDS 52361 52987 . + 0 ID=cds-HJH9163224.1;Parent=gene-O5D79_001711;Dbxref=NCBI_GP:HJH9163224.1;Name=HJH9163224.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459839.1;locus_tag=O5D79_001711;product=glutathione S-transferase family protein;protein_id=HJH9163224.1;transl_table=11 DALFDJ020000007.1 tpg gene 52984 53511 . - . ID=gene-O5D79_001712;Name=O5D79_001712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001712 DALFDJ020000007.1 Protein Homology CDS 52984 53511 . - 0 ID=cds-HJH9163225.1;Parent=gene-O5D79_001712;Dbxref=NCBI_GP:HJH9163225.1;Name=HJH9163225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252732.1;locus_tag=O5D79_001712;product=PQQ-dependent sugar dehydrogenase;protein_id=HJH9163225.1;transl_table=11 DALFDJ020000007.1 tpg pseudogene 53572 53667 . - . ID=gene-O5D79_001713;Name=O5D79_001713;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001713;pseudo=true DALFDJ020000007.1 Protein Homology CDS 53572 53667 . - 0 ID=cds-O5D79_001713;Parent=gene-O5D79_001713;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF015750.6;locus_tag=O5D79_001713;product=IS1 family transposase;pseudo=true;transl_table=11 DALFDJ020000007.1 tpg gene 54011 54436 . + . ID=gene-O5D79_001714;Name=O5D79_001714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001714 DALFDJ020000007.1 Protein Homology CDS 54011 54436 . + 0 ID=cds-HJH9163226.1;Parent=gene-O5D79_001714;Dbxref=NCBI_GP:HJH9163226.1;Name=HJH9163226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459837.1;locus_tag=O5D79_001714;product=GntP family permease;protein_id=HJH9163226.1;transl_table=11 DALFDJ020000007.1 tpg gene 54701 55591 . + . ID=gene-O5D79_001715;Name=O5D79_001715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001715 DALFDJ020000007.1 Protein Homology CDS 54701 55591 . + 0 ID=cds-HJH9163227.1;Parent=gene-O5D79_001715;Dbxref=NCBI_GP:HJH9163227.1;Name=HJH9163227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459836.1;locus_tag=O5D79_001715;product=LysR family transcriptional regulator;protein_id=HJH9163227.1;transl_table=11 DALFDJ020000007.1 tpg gene 55597 57282 . - . ID=gene-O5D79_001716;Name=O5D79_001716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001716 DALFDJ020000007.1 Protein Homology CDS 55597 57282 . - 0 ID=cds-HJH9163228.1;Parent=gene-O5D79_001716;Dbxref=NCBI_GP:HJH9163228.1;Name=HJH9163228.1;Ontology_term=GO:0022900,GO:0004174,GO:0046872,GO:0051539;gbkey=CDS;go_function=electron-transferring-flavoprotein dehydrogenase activity|0004174||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459835.1;locus_tag=O5D79_001716;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=HJH9163228.1;transl_table=11 DALFDJ020000007.1 tpg gene 57731 58894 . - . ID=gene-O5D79_001717;Name=O5D79_001717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001717 DALFDJ020000007.1 Protein Homology CDS 57731 58894 . - 0 ID=cds-HJH9163229.1;Parent=gene-O5D79_001717;Dbxref=NCBI_GP:HJH9163229.1;Name=HJH9163229.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459834.1;locus_tag=O5D79_001717;product=acyl-CoA dehydrogenase family protein;protein_id=HJH9163229.1;transl_table=11 DALFDJ020000007.1 tpg gene 58891 59154 . - . ID=gene-O5D79_001718;Name=O5D79_001718;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001718 DALFDJ020000007.1 GeneMarkS-2+ CDS 58891 59154 . - 0 ID=cds-HJH9163230.1;Parent=gene-O5D79_001718;Dbxref=NCBI_GP:HJH9163230.1;Name=HJH9163230.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_001718;product=hypothetical protein;protein_id=HJH9163230.1;transl_table=11 DALFDJ020000007.1 tpg gene 59187 60140 . - . ID=gene-O5D79_001719;Name=O5D79_001719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001719 DALFDJ020000007.1 Protein Homology CDS 59187 60140 . - 0 ID=cds-HJH9163231.1;Parent=gene-O5D79_001719;Dbxref=NCBI_GP:HJH9163231.1;Name=HJH9163231.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459833.1;locus_tag=O5D79_001719;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=HJH9163231.1;transl_table=11 DALFDJ020000007.1 tpg gene 60151 60900 . - . ID=gene-O5D79_001720;Name=O5D79_001720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001720 DALFDJ020000007.1 Protein Homology CDS 60151 60900 . - 0 ID=cds-HJH9163232.1;Parent=gene-O5D79_001720;Dbxref=NCBI_GP:HJH9163232.1;Name=HJH9163232.1;Ontology_term=GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002949615.1;locus_tag=O5D79_001720;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=HJH9163232.1;transl_table=11 DALFDJ020000007.1 tpg gene 60923 61438 . - . ID=gene-O5D79_001721;Name=O5D79_001721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001721 DALFDJ020000007.1 Protein Homology CDS 60923 61438 . - 0 ID=cds-HJH9163233.1;Parent=gene-O5D79_001721;Dbxref=NCBI_GP:HJH9163233.1;Name=HJH9163233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459831.1;locus_tag=O5D79_001721;product=STM0854 family CoA ester lyase;protein_id=HJH9163233.1;transl_table=11 DALFDJ020000007.1 tpg pseudogene 61764 62049 . - . ID=gene-O5D79_001722;Name=O5D79_001722;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001722;pseudo=true DALFDJ020000007.1 Protein Homology CDS 61764 62049 . - 0 ID=cds-O5D79_001722;Parent=gene-O5D79_001722;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_046881606.1;locus_tag=O5D79_001722;product=IS4-like element ISEc60 family transposase;pseudo=true;transl_table=11 DALFDJ020000007.1 tpg gene 62151 62534 . - . ID=gene-O5D79_001723;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=O5D79_001723 DALFDJ020000007.1 Protein Homology CDS 62151 62534 . - 0 ID=cds-HJH9163234.1;Parent=gene-O5D79_001723;Dbxref=NCBI_GP:HJH9163234.1;Name=HJH9163234.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459830.1;locus_tag=O5D79_001723;product=biofilm formation regulator BssR;protein_id=HJH9163234.1;transl_table=11 DALFDJ020000007.1 tpg gene 62765 64090 . + . ID=gene-O5D79_001724;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=O5D79_001724 DALFDJ020000007.1 Protein Homology CDS 62765 64090 . + 0 ID=cds-HJH9163235.1;Parent=gene-O5D79_001724;Dbxref=NCBI_GP:HJH9163235.1;Name=HJH9163235.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459829.1;locus_tag=O5D79_001724;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=HJH9163235.1;transl_table=11 DALFDJ020000007.1 tpg gene 64181 65092 . - . ID=gene-O5D79_001725;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=O5D79_001725 DALFDJ020000007.1 Protein Homology CDS 64181 65092 . - 0 ID=cds-HJH9163236.1;Parent=gene-O5D79_001725;Dbxref=NCBI_GP:HJH9163236.1;Name=HJH9163236.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459828.1;locus_tag=O5D79_001725;product=glutathione ABC transporter permease GsiD;protein_id=HJH9163236.1;transl_table=11 DALFDJ020000007.1 tpg gene 65095 66015 . - . ID=gene-O5D79_001726;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=O5D79_001726 DALFDJ020000007.1 Protein Homology CDS 65095 66015 . - 0 ID=cds-HJH9163237.1;Parent=gene-O5D79_001726;Dbxref=NCBI_GP:HJH9163237.1;Name=HJH9163237.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459827.1;locus_tag=O5D79_001726;product=glutathione ABC transporter permease GsiC;protein_id=HJH9163237.1;transl_table=11 DALFDJ020000007.1 tpg gene 66076 67614 . - . ID=gene-O5D79_001727;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=O5D79_001727 DALFDJ020000007.1 Protein Homology CDS 66076 67614 . - 0 ID=cds-HJH9163238.1;Parent=gene-O5D79_001727;Dbxref=NCBI_GP:HJH9163238.1;Name=HJH9163238.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459826.1;locus_tag=O5D79_001727;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=HJH9163238.1;transl_table=11 DALFDJ020000007.1 tpg gene 67647 69518 . - . ID=gene-O5D79_001728;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=O5D79_001728 DALFDJ020000007.1 Protein Homology CDS 67647 69518 . - 0 ID=cds-HJH9163239.1;Parent=gene-O5D79_001728;Dbxref=NCBI_GP:HJH9163239.1;Name=HJH9163239.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=O5D79_001728;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=HJH9163239.1;transl_table=11 DALFDJ020000007.1 tpg gene 69529 70470 . - . ID=gene-O5D79_001729;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=O5D79_001729 DALFDJ020000007.1 Protein Homology CDS 69529 70470 . - 0 ID=cds-HJH9163240.1;Parent=gene-O5D79_001729;Dbxref=NCBI_GP:HJH9163240.1;Name=HJH9163240.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459824.1;locus_tag=O5D79_001729;product=beta-aspartyl-peptidase;protein_id=HJH9163240.1;transl_table=11 DALFDJ020000007.1 tpg gene 70674 71909 . + . ID=gene-O5D79_001730;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=O5D79_001730 DALFDJ020000007.1 Protein Homology CDS 70674 71909 . + 0 ID=cds-HJH9163241.1;Parent=gene-O5D79_001730;Dbxref=NCBI_GP:HJH9163241.1;Name=HJH9163241.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=O5D79_001730;product=molybdopterin molybdotransferase MoeA;protein_id=HJH9163241.1;transl_table=11 DALFDJ020000007.1 tpg gene 71909 72658 . + . ID=gene-O5D79_001731;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=O5D79_001731 DALFDJ020000007.1 Protein Homology CDS 71909 72658 . + 0 ID=cds-HJH9163242.1;Parent=gene-O5D79_001731;Dbxref=NCBI_GP:HJH9163242.1;Name=HJH9163242.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459822.1;locus_tag=O5D79_001731;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=HJH9163242.1;transl_table=11 DALFDJ020000007.1 tpg gene 72936 73835 . + . ID=gene-O5D79_001732;Name=O5D79_001732;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001732 DALFDJ020000007.1 Protein Homology CDS 72936 73835 . + 0 ID=cds-HJH9163243.1;Parent=gene-O5D79_001732;Dbxref=NCBI_GP:HJH9163243.1;Name=HJH9163243.1;Ontology_term=GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459821.1;locus_tag=O5D79_001732;product=glycyl-radical enzyme activating protein;protein_id=HJH9163243.1;transl_table=11 DALFDJ020000007.1 tpg gene 73841 76273 . + . ID=gene-O5D79_001733;Name=O5D79_001733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001733 DALFDJ020000007.1 Protein Homology CDS 73841 76273 . + 0 ID=cds-HJH9163244.1;Parent=gene-O5D79_001733;Dbxref=NCBI_GP:HJH9163244.1;Name=HJH9163244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459820.1;locus_tag=O5D79_001733;product=glycyl radical protein;protein_id=HJH9163244.1;transl_table=11 DALFDJ020000007.1 tpg gene 76351 77160 . - . ID=gene-O5D79_001734;Name=O5D79_001734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001734 DALFDJ020000007.1 Protein Homology CDS 76351 77160 . - 0 ID=cds-HJH9163245.1;Parent=gene-O5D79_001734;Dbxref=NCBI_GP:HJH9163245.1;Name=HJH9163245.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459819.1;locus_tag=O5D79_001734;product=Cof-type HAD-IIB family hydrolase;protein_id=HJH9163245.1;transl_table=11 DALFDJ020000007.1 tpg gene 77422 78687 . + . ID=gene-O5D79_001735;Name=O5D79_001735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001735 DALFDJ020000007.1 Protein Homology CDS 77422 78687 . + 0 ID=cds-HJH9163246.1;Parent=gene-O5D79_001735;Dbxref=NCBI_GP:HJH9163246.1;Name=HJH9163246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459818.1;locus_tag=O5D79_001735;product=DUF1479 domain-containing protein;protein_id=HJH9163246.1;transl_table=11 DALFDJ020000007.1 tpg gene 78809 80404 . - . ID=gene-O5D79_001736;Name=O5D79_001736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001736 DALFDJ020000007.1 Protein Homology CDS 78809 80404 . - 0 ID=cds-HJH9163247.1;Parent=gene-O5D79_001736;Dbxref=NCBI_GP:HJH9163247.1;Name=HJH9163247.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961428.1;locus_tag=O5D79_001736;product=ABC-F family ATPase;protein_id=HJH9163247.1;transl_table=11 DALFDJ020000007.1 tpg gene 80624 81544 . + . ID=gene-O5D79_001737;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=O5D79_001737 DALFDJ020000007.1 Protein Homology CDS 80624 81544 . + 0 ID=cds-HJH9163248.1;Parent=gene-O5D79_001737;Dbxref=NCBI_GP:HJH9163248.1;Name=HJH9163248.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459814.1;locus_tag=O5D79_001737;product=L%2CD-transpeptidase;protein_id=HJH9163248.1;transl_table=11 DALFDJ020000007.1 tpg gene 81588 82700 . - . ID=gene-O5D79_001738;Name=O5D79_001738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001738 DALFDJ020000007.1 Protein Homology CDS 81588 82700 . - 0 ID=cds-HJH9163249.1;Parent=gene-O5D79_001738;Dbxref=NCBI_GP:HJH9163249.1;Name=HJH9163249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459813.1;locus_tag=O5D79_001738;product=anion transporter;protein_id=HJH9163249.1;transl_table=11 DALFDJ020000007.1 tpg gene 82697 83170 . - . ID=gene-O5D79_001739;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=O5D79_001739 DALFDJ020000007.1 Protein Homology CDS 82697 83170 . - 0 ID=cds-HJH9163250.1;Parent=gene-O5D79_001739;Dbxref=NCBI_GP:HJH9163250.1;Name=HJH9163250.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459812.1;locus_tag=O5D79_001739;product=manganese-binding transcriptional regulator MntR;protein_id=HJH9163250.1;transl_table=11 DALFDJ020000007.1 tpg gene 83356 83484 . + . ID=gene-O5D79_001740;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=O5D79_001740 DALFDJ020000007.1 Protein Homology CDS 83356 83484 . + 0 ID=cds-HJH9163251.1;Parent=gene-O5D79_001740;Dbxref=NCBI_GP:HJH9163251.1;Name=HJH9163251.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=O5D79_001740;product=manganase accumulation protein MntS;protein_id=HJH9163251.1;transl_table=11 DALFDJ020000007.1 tpg gene 83749 85329 . + . ID=gene-O5D79_001741;Name=O5D79_001741;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001741 DALFDJ020000007.1 Protein Homology CDS 83749 85329 . + 0 ID=cds-HJH9163252.1;Parent=gene-O5D79_001741;Dbxref=NCBI_GP:HJH9163252.1;Name=HJH9163252.1;Ontology_term=GO:0009244,GO:1900727,GO:0016776;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459811.1;locus_tag=O5D79_001741;product=phosphoethanolamine transferase;protein_id=HJH9163252.1;transl_table=11 DALFDJ020000007.1 tpg gene 85394 85909 . - . ID=gene-O5D79_001742;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=O5D79_001742 DALFDJ020000007.1 Protein Homology CDS 85394 85909 . - 0 ID=cds-HJH9163253.1;Parent=gene-O5D79_001742;Dbxref=NCBI_GP:HJH9163253.1;Name=HJH9163253.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459810.1;locus_tag=O5D79_001742;product=outer membrane protein OmpX;protein_id=HJH9163253.1;transl_table=11 DALFDJ020000007.1 tpg gene 86263 87150 . + . ID=gene-O5D79_001743;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=O5D79_001743 DALFDJ020000007.1 Protein Homology CDS 86263 87150 . + 0 ID=cds-HJH9163254.1;Parent=gene-O5D79_001743;Dbxref=NCBI_GP:HJH9163254.1;Name=HJH9163254.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459809.1;locus_tag=O5D79_001743;product=threonine/homoserine exporter RhtA;protein_id=HJH9163254.1;transl_table=11 DALFDJ020000007.1 tpg gene 87453 87956 . + . ID=gene-O5D79_001744;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=O5D79_001744 DALFDJ020000007.1 Protein Homology CDS 87453 87956 . + 0 ID=cds-HJH9163255.1;Parent=gene-O5D79_001744;Dbxref=NCBI_GP:HJH9163255.1;Name=HJH9163255.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=O5D79_001744;product=DNA starvation/stationary phase protection protein Dps;protein_id=HJH9163255.1;transl_table=11 DALFDJ020000007.1 tpg gene 88433 89179 . + . ID=gene-O5D79_001745;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=O5D79_001745 DALFDJ020000007.1 Protein Homology CDS 88433 89179 . + 0 ID=cds-HJH9163256.1;Parent=gene-O5D79_001745;Dbxref=NCBI_GP:HJH9163256.1;Name=HJH9163256.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=O5D79_001745;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=HJH9163256.1;transl_table=11 DALFDJ020000007.1 tpg gene 89325 89984 . + . ID=gene-O5D79_001746;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=O5D79_001746 DALFDJ020000007.1 Protein Homology CDS 89325 89984 . + 0 ID=cds-HJH9163257.1;Parent=gene-O5D79_001746;Dbxref=NCBI_GP:HJH9163257.1;Name=HJH9163257.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=O5D79_001746;product=glutamine ABC transporter permease GlnP;protein_id=HJH9163257.1;transl_table=11 DALFDJ020000007.1 tpg gene 89981 90703 . + . ID=gene-O5D79_001747;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=O5D79_001747 DALFDJ020000007.1 Protein Homology CDS 89981 90703 . + 0 ID=cds-HJH9163258.1;Parent=gene-O5D79_001747;Dbxref=NCBI_GP:HJH9163258.1;Name=HJH9163258.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=O5D79_001747;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=HJH9163258.1;transl_table=11 DALFDJ020000007.1 tpg gene 90822 93044 . + . ID=gene-O5D79_001748;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=O5D79_001748 DALFDJ020000007.1 Protein Homology CDS 90822 93044 . + 0 ID=cds-HJH9163259.1;Parent=gene-O5D79_001748;Dbxref=NCBI_GP:HJH9163259.1;Name=HJH9163259.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459804.1;locus_tag=O5D79_001748;product=mechanosensitive channel protein;protein_id=HJH9163259.1;transl_table=11 DALFDJ020000007.1 tpg gene 93041 93967 . - . ID=gene-O5D79_001749;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=O5D79_001749 DALFDJ020000007.1 Protein Homology CDS 93041 93967 . - 0 ID=cds-HJH9163260.1;Parent=gene-O5D79_001749;Dbxref=NCBI_GP:HJH9163260.1;Name=HJH9163260.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459803.1;locus_tag=O5D79_001749;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=HJH9163260.1;transl_table=11 DALFDJ020000007.1 tpg gene 94172 94438 . + . ID=gene-O5D79_001750;Name=O5D79_001750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001750 DALFDJ020000007.1 Protein Homology CDS 94172 94438 . + 0 ID=cds-HJH9163261.1;Parent=gene-O5D79_001750;Dbxref=NCBI_GP:HJH9163261.1;Name=HJH9163261.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459802.1;locus_tag=O5D79_001750;product=DksA/TraR family C4-type zinc finger protein;protein_id=HJH9163261.1;transl_table=11 DALFDJ020000007.1 tpg gene 94723 94983 . + . ID=gene-O5D79_001751;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=O5D79_001751 DALFDJ020000007.1 Protein Homology CDS 94723 94983 . + 0 ID=cds-HJH9163262.1;Parent=gene-O5D79_001751;Dbxref=NCBI_GP:HJH9163262.1;Name=HJH9163262.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459801.1;locus_tag=O5D79_001751;product=DUF1471 family protein YbiJ;protein_id=HJH9163262.1;transl_table=11 DALFDJ020000007.1 tpg gene 95139 96113 . - . ID=gene-O5D79_001752;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=O5D79_001752 DALFDJ020000007.1 Protein Homology CDS 95139 96113 . - 0 ID=cds-HJH9163263.1;Parent=gene-O5D79_001752;Dbxref=NCBI_GP:HJH9163263.1;Name=HJH9163263.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459800.1;locus_tag=O5D79_001752;product=DNA-binding protein YbiB;protein_id=HJH9163263.1;transl_table=11 DALFDJ020000007.1 tpg gene 96143 98287 . - . ID=gene-O5D79_001753;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=O5D79_001753 DALFDJ020000007.1 Protein Homology CDS 96143 98287 . - 0 ID=cds-HJH9163264.1;Parent=gene-O5D79_001753;Dbxref=NCBI_GP:HJH9163264.1;Name=HJH9163264.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459799.1;locus_tag=O5D79_001753;product=ATP-dependent DNA helicase DinG;protein_id=HJH9163264.1;transl_table=11 DALFDJ020000007.1 tpg gene 98495 99853 . - . ID=gene-O5D79_001754;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=O5D79_001754 DALFDJ020000007.1 Protein Homology CDS 98495 99853 . - 0 ID=cds-HJH9163265.1;Parent=gene-O5D79_001754;Dbxref=NCBI_GP:HJH9163265.1;Name=HJH9163265.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459798.1;locus_tag=O5D79_001754;product=ATP-dependent RNA helicase RhlE;protein_id=HJH9163265.1;transl_table=11 DALFDJ020000007.1 tpg gene 100083 100757 . + . ID=gene-O5D79_001755;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=O5D79_001755 DALFDJ020000007.1 Protein Homology CDS 100083 100757 . + 0 ID=cds-HJH9163266.1;Parent=gene-O5D79_001755;Dbxref=NCBI_GP:HJH9163266.1;Name=HJH9163266.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459797.1;locus_tag=O5D79_001755;product=transcriptional regulator CecR;protein_id=HJH9163266.1;transl_table=11 DALFDJ020000007.1 tpg gene 100757 101752 . + . ID=gene-O5D79_001756;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=O5D79_001756 DALFDJ020000007.1 Protein Homology CDS 100757 101752 . + 0 ID=cds-HJH9163267.1;Parent=gene-O5D79_001756;Dbxref=NCBI_GP:HJH9163267.1;Name=HJH9163267.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=O5D79_001756;product=secretion protein HlyD;protein_id=HJH9163267.1;transl_table=11 DALFDJ020000007.1 tpg gene 101745 103481 . + . ID=gene-O5D79_001757;Name=O5D79_001757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001757 DALFDJ020000007.1 Protein Homology CDS 101745 103481 . + 0 ID=cds-HJH9163268.1;Parent=gene-O5D79_001757;Dbxref=NCBI_GP:HJH9163268.1;Name=HJH9163268.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459795.1;locus_tag=O5D79_001757;product=ATP-binding cassette domain-containing protein;protein_id=HJH9163268.1;transl_table=11 DALFDJ020000007.1 tpg gene 103474 104604 . + . ID=gene-O5D79_001758;Name=O5D79_001758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001758 DALFDJ020000007.1 Protein Homology CDS 103474 104604 . + 0 ID=cds-HJH9163269.1;Parent=gene-O5D79_001758;Dbxref=NCBI_GP:HJH9163269.1;Name=HJH9163269.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459794.1;locus_tag=O5D79_001758;product=ABC transporter permease;protein_id=HJH9163269.1;transl_table=11 DALFDJ020000007.1 tpg gene 104720 105826 . + . ID=gene-O5D79_001759;Name=O5D79_001759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001759 DALFDJ020000007.1 Protein Homology CDS 104720 105826 . + 0 ID=cds-HJH9163270.1;Parent=gene-O5D79_001759;Dbxref=NCBI_GP:HJH9163270.1;Name=HJH9163270.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459793.1;locus_tag=O5D79_001759;product=ABC transporter permease;protein_id=HJH9163270.1;transl_table=11 DALFDJ020000007.1 tpg gene 105788 106198 . - . ID=gene-O5D79_001760;Name=O5D79_001760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001760 DALFDJ020000007.1 Protein Homology CDS 105788 106198 . - 0 ID=cds-HJH9163271.1;Parent=gene-O5D79_001760;Dbxref=NCBI_GP:HJH9163271.1;Name=HJH9163271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459792.1;locus_tag=O5D79_001760;product=YbhQ family protein;protein_id=HJH9163271.1;transl_table=11 DALFDJ020000007.1 tpg gene 106331 107089 . + . ID=gene-O5D79_001761;Name=O5D79_001761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001761 DALFDJ020000007.1 Protein Homology CDS 106331 107089 . + 0 ID=cds-HJH9163272.1;Parent=gene-O5D79_001761;Dbxref=NCBI_GP:HJH9163272.1;Name=HJH9163272.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459791.1;locus_tag=O5D79_001761;product=endonuclease/exonuclease/phosphatase family protein;protein_id=HJH9163272.1;transl_table=11 DALFDJ020000007.1 tpg gene 107086 108327 . + . ID=gene-O5D79_001762;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=O5D79_001762 DALFDJ020000007.1 Protein Homology CDS 107086 108327 . + 0 ID=cds-HJH9163273.1;Parent=gene-O5D79_001762;Dbxref=NCBI_GP:HJH9163273.1;Name=HJH9163273.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459790.1;locus_tag=O5D79_001762;product=cardiolipin synthase ClsB;protein_id=HJH9163273.1;transl_table=11 DALFDJ020000007.1 tpg gene 108327 109289 . + . ID=gene-O5D79_001763;Name=O5D79_001763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001763 DALFDJ020000007.1 Protein Homology CDS 108327 109289 . + 0 ID=cds-HJH9163274.1;Parent=gene-O5D79_001763;Dbxref=NCBI_GP:HJH9163274.1;Name=HJH9163274.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459789.1;locus_tag=O5D79_001763;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;protein_id=HJH9163274.1;transl_table=11 DALFDJ020000007.1 tpg gene 109292 109852 . - . ID=gene-O5D79_001764;Name=O5D79_001764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001764 DALFDJ020000007.1 Protein Homology CDS 109292 109852 . - 0 ID=cds-HJH9163275.1;Parent=gene-O5D79_001764;Dbxref=NCBI_GP:HJH9163275.1;Name=HJH9163275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459788.1;locus_tag=O5D79_001764;product=hypothetical protein;protein_id=HJH9163275.1;transl_table=11 DALFDJ020000007.1 tpg gene 109860 110468 . - . ID=gene-O5D79_001765;Name=O5D79_001765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001765 DALFDJ020000007.1 Protein Homology CDS 109860 110468 . - 0 ID=cds-HJH9163276.1;Parent=gene-O5D79_001765;Dbxref=NCBI_GP:HJH9163276.1;Name=HJH9163276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459787.1;locus_tag=O5D79_001765;product=hypothetical protein;protein_id=HJH9163276.1;transl_table=11 DALFDJ020000007.1 tpg gene 110492 111199 . - . ID=gene-O5D79_001766;Name=O5D79_001766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001766 DALFDJ020000007.1 Protein Homology CDS 110492 111199 . - 0 ID=cds-HJH9163277.1;Parent=gene-O5D79_001766;Dbxref=NCBI_GP:HJH9163277.1;Name=HJH9163277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459786.1;locus_tag=O5D79_001766;product=Bax inhibitor-1 family protein;protein_id=HJH9163277.1;transl_table=11 DALFDJ020000007.1 tpg gene 111346 112050 . - . ID=gene-O5D79_001767;Name=O5D79_001767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001767 DALFDJ020000007.1 Protein Homology CDS 111346 112050 . - 0 ID=cds-HJH9163278.1;Parent=gene-O5D79_001767;Dbxref=NCBI_GP:HJH9163278.1;Name=HJH9163278.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459785.1;locus_tag=O5D79_001767;product=Bax inhibitor-1/YccA family protein;protein_id=HJH9163278.1;transl_table=11 DALFDJ020000007.1 tpg gene 112098 112550 . - . ID=gene-O5D79_001768;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=O5D79_001768 DALFDJ020000007.1 Protein Homology CDS 112098 112550 . - 0 ID=cds-HJH9163279.1;Parent=gene-O5D79_001768;Dbxref=NCBI_GP:HJH9163279.1;Name=HJH9163279.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459784.1;locus_tag=O5D79_001768;product=molybdopterin synthase catalytic subunit MoaE;protein_id=HJH9163279.1;transl_table=11 DALFDJ020000007.1 tpg gene 112552 112797 . - . ID=gene-O5D79_001769;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=O5D79_001769 DALFDJ020000007.1 Protein Homology CDS 112552 112797 . - 0 ID=cds-HJH9163280.1;Parent=gene-O5D79_001769;Dbxref=NCBI_GP:HJH9163280.1;Name=HJH9163280.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308889.1;locus_tag=O5D79_001769;product=molybdopterin synthase sulfur carrier subunit;protein_id=HJH9163280.1;transl_table=11 DALFDJ020000007.1 tpg gene 112790 113275 . - . ID=gene-O5D79_001770;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=O5D79_001770 DALFDJ020000007.1 Protein Homology CDS 112790 113275 . - 0 ID=cds-HJH9163281.1;Parent=gene-O5D79_001770;Dbxref=NCBI_GP:HJH9163281.1;Name=HJH9163281.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459782.1;locus_tag=O5D79_001770;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=HJH9163281.1;transl_table=11 DALFDJ020000007.1 tpg gene 113278 113790 . - . ID=gene-O5D79_001771;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=O5D79_001771 DALFDJ020000007.1 Protein Homology CDS 113278 113790 . - 0 ID=cds-HJH9163282.1;Parent=gene-O5D79_001771;Dbxref=NCBI_GP:HJH9163282.1;Name=HJH9163282.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=O5D79_001771;product=molybdenum cofactor biosynthesis protein B;protein_id=HJH9163282.1;transl_table=11 DALFDJ020000007.1 tpg gene 113812 114801 . - . ID=gene-O5D79_001772;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=O5D79_001772 DALFDJ020000007.1 Protein Homology CDS 113812 114801 . - 0 ID=cds-HJH9163283.1;Parent=gene-O5D79_001772;Dbxref=NCBI_GP:HJH9163283.1;Name=HJH9163283.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459780.1;locus_tag=O5D79_001772;product=GTP 3'%2C8-cyclase MoaA;protein_id=HJH9163283.1;transl_table=11 DALFDJ020000007.1 cmsearch riboswitch 114789 114933 . - . ID=id-DALFDJ020000007.1:114789..114933;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch DALFDJ020000007.1 tpg gene 115198 116106 . + . ID=gene-O5D79_001773;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=O5D79_001773 DALFDJ020000007.1 Protein Homology CDS 115198 116106 . + 0 ID=cds-HJH9163284.1;Parent=gene-O5D79_001773;Dbxref=NCBI_GP:HJH9163284.1;Name=HJH9163284.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459779.1;locus_tag=O5D79_001773;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=HJH9163284.1;transl_table=11 DALFDJ020000007.1 tpg gene 116198 118495 . - . ID=gene-O5D79_001774;Name=slrP;gbkey=Gene;gene=slrP;gene_biotype=protein_coding;locus_tag=O5D79_001774 DALFDJ020000007.1 Protein Homology CDS 116198 118495 . - 0 ID=cds-HJH9163285.1;Parent=gene-O5D79_001774;Dbxref=NCBI_GP:HJH9163285.1;Name=HJH9163285.1;gbkey=CDS;gene=slrP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459778.1;locus_tag=O5D79_001774;product=SPI-1 type III secretion system effector E3 ubiquitin transferase SlrP;protein_id=HJH9163285.1;transl_table=11 DALFDJ020000007.1 tpg pseudogene 118503 118678 . - . ID=gene-O5D79_001775;Name=O5D79_001775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001775;pseudo=true DALFDJ020000007.1 Protein Homology CDS 118503 118678 . - 0 ID=cds-O5D79_001775;Parent=gene-O5D79_001775;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447236.1;locus_tag=O5D79_001775;product=hypothetical protein;pseudo=true;transl_table=11 DALFDJ020000007.1 tpg gene 118987 121008 . - . ID=gene-O5D79_001776;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=O5D79_001776 DALFDJ020000007.1 Protein Homology CDS 118987 121008 . - 0 ID=cds-HJH9163286.1;Parent=gene-O5D79_001776;Dbxref=NCBI_GP:HJH9163286.1;Name=HJH9163286.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=O5D79_001776;product=excinuclease ABC subunit UvrB;protein_id=HJH9163286.1;transl_table=11 DALFDJ020000007.1 tpg gene 121659 122345 . - . ID=gene-O5D79_001777;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=O5D79_001777 DALFDJ020000007.1 Protein Homology CDS 121659 122345 . - 0 ID=cds-HJH9163287.1;Parent=gene-O5D79_001777;Dbxref=NCBI_GP:HJH9163287.1;Name=HJH9163287.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459775.1;locus_tag=O5D79_001777;product=dethiobiotin synthase;protein_id=HJH9163287.1;transl_table=11 DALFDJ020000007.1 tpg gene 122338 123093 . - . ID=gene-O5D79_001778;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=O5D79_001778 DALFDJ020000007.1 Protein Homology CDS 122338 123093 . - 0 ID=cds-HJH9163288.1;Parent=gene-O5D79_001778;Dbxref=NCBI_GP:HJH9163288.1;Name=HJH9163288.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459774.1;locus_tag=O5D79_001778;product=malonyl-ACP O-methyltransferase BioC;protein_id=HJH9163288.1;transl_table=11 DALFDJ020000007.1 tpg gene 123077 124234 . - . ID=gene-O5D79_001779;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=O5D79_001779 DALFDJ020000007.1 Protein Homology CDS 123077 124234 . - 0 ID=cds-HJH9163289.1;Parent=gene-O5D79_001779;Dbxref=NCBI_GP:HJH9163289.1;Name=HJH9163289.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459773.1;locus_tag=O5D79_001779;product=8-amino-7-oxononanoate synthase;protein_id=HJH9163289.1;transl_table=11 DALFDJ020000007.1 tpg gene 124231 125271 . - . ID=gene-O5D79_001780;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=O5D79_001780 DALFDJ020000007.1 Protein Homology CDS 124231 125271 . - 0 ID=cds-HJH9163290.1;Parent=gene-O5D79_001780;Dbxref=NCBI_GP:HJH9163290.1;Name=HJH9163290.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459772.1;locus_tag=O5D79_001780;product=biotin synthase BioB;protein_id=HJH9163290.1;transl_table=11 DALFDJ020000007.1 tpg gene 125358 126647 . + . ID=gene-O5D79_001781;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=O5D79_001781 DALFDJ020000007.1 Protein Homology CDS 125358 126647 . + 0 ID=cds-HJH9163291.1;Parent=gene-O5D79_001781;Dbxref=NCBI_GP:HJH9163291.1;Name=HJH9163291.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459771.1;locus_tag=O5D79_001781;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=HJH9163291.1;transl_table=11 DALFDJ020000007.1 tpg gene 126705 127181 . + . ID=gene-O5D79_001782;Name=O5D79_001782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001782 DALFDJ020000007.1 Protein Homology CDS 126705 127181 . + 0 ID=cds-HJH9163292.1;Parent=gene-O5D79_001782;Dbxref=NCBI_GP:HJH9163292.1;Name=HJH9163292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459770.1;locus_tag=O5D79_001782;product=kinase inhibitor;protein_id=HJH9163292.1;transl_table=11 DALFDJ020000007.1 tpg gene 127266 128786 . - . ID=gene-O5D79_001783;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=O5D79_001783 DALFDJ020000007.1 Protein Homology CDS 127266 128786 . - 0 ID=cds-HJH9163293.1;Parent=gene-O5D79_001783;Dbxref=NCBI_GP:HJH9163293.1;Name=HJH9163293.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459769.1;locus_tag=O5D79_001783;product=histidine ammonia-lyase;protein_id=HJH9163293.1;transl_table=11 DALFDJ020000007.1 tpg gene 128788 130473 . - . ID=gene-O5D79_001784;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=O5D79_001784 DALFDJ020000007.1 Protein Homology CDS 128788 130473 . - 0 ID=cds-HJH9163294.1;Parent=gene-O5D79_001784;Dbxref=NCBI_GP:HJH9163294.1;Name=HJH9163294.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441920.1;locus_tag=O5D79_001784;product=urocanate hydratase;protein_id=HJH9163294.1;transl_table=11 DALFDJ020000007.1 tpg gene 130670 131395 . - . ID=gene-O5D79_001785;Name=O5D79_001785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001785 DALFDJ020000007.1 Protein Homology CDS 130670 131395 . - 0 ID=cds-HJH9163295.1;Parent=gene-O5D79_001785;Dbxref=NCBI_GP:HJH9163295.1;Name=HJH9163295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459768.1;locus_tag=O5D79_001785;product=histidine utilization repressor;protein_id=HJH9163295.1;transl_table=11 DALFDJ020000007.1 tpg gene 131440 132381 . - . ID=gene-O5D79_001786;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=O5D79_001786 DALFDJ020000007.1 Protein Homology CDS 131440 132381 . - 0 ID=cds-HJH9163296.1;Parent=gene-O5D79_001786;Dbxref=NCBI_GP:HJH9163296.1;Name=HJH9163296.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459767.1;locus_tag=O5D79_001786;product=formimidoylglutamase;protein_id=HJH9163296.1;transl_table=11 DALFDJ020000007.1 tpg gene 132378 133601 . - . ID=gene-O5D79_001787;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=O5D79_001787 DALFDJ020000007.1 Protein Homology CDS 132378 133601 . - 0 ID=cds-HJH9163297.1;Parent=gene-O5D79_001787;Dbxref=NCBI_GP:HJH9163297.1;Name=HJH9163297.1;Ontology_term=GO:0019556,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459766.1;locus_tag=O5D79_001787;product=imidazolonepropionase;protein_id=HJH9163297.1;transl_table=11 DALFDJ020000007.1 tpg gene 133839 135122 . + . ID=gene-O5D79_001788;Name=O5D79_001788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001788 DALFDJ020000007.1 Protein Homology CDS 133839 135122 . + 0 ID=cds-HJH9163298.1;Parent=gene-O5D79_001788;Dbxref=NCBI_GP:HJH9163298.1;Name=HJH9163298.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459765.1;locus_tag=O5D79_001788;product=putative acyl-CoA thioester hydrolase;protein_id=HJH9163298.1;transl_table=11 DALFDJ020000007.1 tpg gene 135183 137441 . - . ID=gene-O5D79_001789;Name=O5D79_001789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001789 DALFDJ020000007.1 Protein Homology CDS 135183 137441 . - 0 ID=cds-HJH9163299.1;Parent=gene-O5D79_001789;Dbxref=NCBI_GP:HJH9163299.1;Name=HJH9163299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000258265.1;locus_tag=O5D79_001789;product=hydratase;protein_id=HJH9163299.1;transl_table=11 DALFDJ020000007.1 tpg gene 137544 138977 . - . ID=gene-O5D79_001790;Name=O5D79_001790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001790 DALFDJ020000007.1 Protein Homology CDS 137544 138977 . - 0 ID=cds-HJH9163300.1;Parent=gene-O5D79_001790;Dbxref=NCBI_GP:HJH9163300.1;Name=HJH9163300.1;Ontology_term=GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415291.1;locus_tag=O5D79_001790;product=anion permease;protein_id=HJH9163300.1;transl_table=11 DALFDJ020000007.1 tpg gene 139060 140115 . - . ID=gene-O5D79_001791;Name=O5D79_001791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001791 DALFDJ020000007.1 Protein Homology CDS 139060 140115 . - 0 ID=cds-HJH9163301.1;Parent=gene-O5D79_001791;Dbxref=NCBI_GP:HJH9163301.1;Name=HJH9163301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000723616.1;locus_tag=O5D79_001791;product=4-oxalomesaconate tautomerase;protein_id=HJH9163301.1;transl_table=11 DALFDJ020000007.1 tpg gene 140314 141246 . + . ID=gene-O5D79_001792;Name=O5D79_001792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001792 DALFDJ020000007.1 Protein Homology CDS 140314 141246 . + 0 ID=cds-HJH9163302.1;Parent=gene-O5D79_001792;Dbxref=NCBI_GP:HJH9163302.1;Name=HJH9163302.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632852.1;locus_tag=O5D79_001792;product=LysR family transcriptional regulator;protein_id=HJH9163302.1;transl_table=11 DALFDJ020000007.1 tpg gene 141359 142354 . - . ID=gene-O5D79_001793;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=O5D79_001793 DALFDJ020000007.1 Protein Homology CDS 141359 142354 . - 0 ID=cds-HJH9163303.1;Parent=gene-O5D79_001793;Dbxref=NCBI_GP:HJH9163303.1;Name=HJH9163303.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459764.1;locus_tag=O5D79_001793;product=6-phosphogluconolactonase;protein_id=HJH9163303.1;transl_table=11 DALFDJ020000007.1 tpg gene 142518 143336 . + . ID=gene-O5D79_001794;Name=O5D79_001794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001794 DALFDJ020000007.1 Protein Homology CDS 142518 143336 . + 0 ID=cds-HJH9163304.1;Parent=gene-O5D79_001794;Dbxref=NCBI_GP:HJH9163304.1;Name=HJH9163304.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=O5D79_001794;product=pyridoxal phosphatase;protein_id=HJH9163304.1;transl_table=11 DALFDJ020000007.1 tpg gene 143337 144395 . - . ID=gene-O5D79_001795;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=O5D79_001795 DALFDJ020000007.1 Protein Homology CDS 143337 144395 . - 0 ID=cds-HJH9163305.1;Parent=gene-O5D79_001795;Dbxref=NCBI_GP:HJH9163305.1;Name=HJH9163305.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=O5D79_001795;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=HJH9163305.1;transl_table=11 DALFDJ020000007.1 tpg gene 144398 145087 . - . ID=gene-O5D79_001796;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=O5D79_001796 DALFDJ020000007.1 Protein Homology CDS 144398 145087 . - 0 ID=cds-HJH9163306.1;Parent=gene-O5D79_001796;Dbxref=NCBI_GP:HJH9163306.1;Name=HJH9163306.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459761.1;locus_tag=O5D79_001796;product=molybdate ABC transporter permease subunit;protein_id=HJH9163306.1;transl_table=11 DALFDJ020000007.1 tpg gene 145087 145860 . - . ID=gene-O5D79_001797;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=O5D79_001797 DALFDJ020000007.1 Protein Homology CDS 145087 145860 . - 0 ID=cds-HJH9163307.1;Parent=gene-O5D79_001797;Dbxref=NCBI_GP:HJH9163307.1;Name=HJH9163307.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459760.1;locus_tag=O5D79_001797;product=molybdate ABC transporter substrate-binding protein;protein_id=HJH9163307.1;transl_table=11 DALFDJ020000007.1 tpg gene 146027 146176 . - . ID=gene-O5D79_001798;Name=O5D79_001798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001798 DALFDJ020000007.1 Protein Homology CDS 146027 146176 . - 0 ID=cds-HJH9163308.1;Parent=gene-O5D79_001798;Dbxref=NCBI_GP:HJH9163308.1;Name=HJH9163308.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459759.1;locus_tag=O5D79_001798;product=AcrZ family multidrug efflux pump-associated protein;protein_id=HJH9163308.1;transl_table=11 DALFDJ020000007.1 tpg gene 146305 147093 . + . ID=gene-O5D79_001799;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=O5D79_001799 DALFDJ020000007.1 Protein Homology CDS 146305 147093 . + 0 ID=cds-HJH9163309.1;Parent=gene-O5D79_001799;Dbxref=NCBI_GP:HJH9163309.1;Name=HJH9163309.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459758.1;locus_tag=O5D79_001799;product=molybdenum-dependent transcriptional regulator;protein_id=HJH9163309.1;transl_table=11 DALFDJ020000007.1 tpg gene 147161 148636 . + . ID=gene-O5D79_001800;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=O5D79_001800 DALFDJ020000007.1 Protein Homology CDS 147161 148636 . + 0 ID=cds-HJH9163310.1;Parent=gene-O5D79_001800;Dbxref=NCBI_GP:HJH9163310.1;Name=HJH9163310.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459757.1;locus_tag=O5D79_001800;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=HJH9163310.1;transl_table=11 DALFDJ020000007.1 tpg gene 148807 149715 . + . ID=gene-O5D79_001801;Name=O5D79_001801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001801 DALFDJ020000007.1 Protein Homology CDS 148807 149715 . + 0 ID=cds-HJH9163311.1;Parent=gene-O5D79_001801;Dbxref=NCBI_GP:HJH9163311.1;Name=HJH9163311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459756.1;locus_tag=O5D79_001801;product=DUF2167 domain-containing protein;protein_id=HJH9163311.1;transl_table=11 DALFDJ020000007.1 tpg gene 149937 150953 . + . ID=gene-O5D79_001802;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=O5D79_001802 DALFDJ020000007.1 Protein Homology CDS 149937 150953 . + 0 ID=cds-HJH9163312.1;Parent=gene-O5D79_001802;Dbxref=NCBI_GP:HJH9163312.1;Name=HJH9163312.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459755.1;locus_tag=O5D79_001802;product=UDP-glucose 4-epimerase GalE;protein_id=HJH9163312.1;transl_table=11 DALFDJ020000007.1 tpg gene 150964 152010 . + . ID=gene-O5D79_001803;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=O5D79_001803 DALFDJ020000007.1 Protein Homology CDS 150964 152010 . + 0 ID=cds-HJH9163313.1;Parent=gene-O5D79_001803;Dbxref=NCBI_GP:HJH9163313.1;Name=HJH9163313.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459754.1;locus_tag=O5D79_001803;product=galactose-1-phosphate uridylyltransferase;protein_id=HJH9163313.1;transl_table=11 DALFDJ020000007.1 tpg gene 152013 153161 . + . ID=gene-O5D79_001804;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=O5D79_001804 DALFDJ020000007.1 Protein Homology CDS 152013 153161 . + 0 ID=cds-HJH9163314.1;Parent=gene-O5D79_001804;Dbxref=NCBI_GP:HJH9163314.1;Name=HJH9163314.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=O5D79_001804;product=galactokinase;protein_id=HJH9163314.1;transl_table=11 DALFDJ020000007.1 tpg gene 153155 154195 . + . ID=gene-O5D79_001805;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=O5D79_001805 DALFDJ020000007.1 Protein Homology CDS 153155 154195 . + 0 ID=cds-HJH9163315.1;Parent=gene-O5D79_001805;Dbxref=NCBI_GP:HJH9163315.1;Name=HJH9163315.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459752.1;locus_tag=O5D79_001805;product=galactose-1-epimerase;protein_id=HJH9163315.1;transl_table=11 DALFDJ020000007.1 tpg gene 154419 155171 . + . ID=gene-O5D79_001806;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=O5D79_001806 DALFDJ020000007.1 Protein Homology CDS 154419 155171 . + 0 ID=cds-HJH9163316.1;Parent=gene-O5D79_001806;Dbxref=NCBI_GP:HJH9163316.1;Name=HJH9163316.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=O5D79_001806;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=HJH9163316.1;transl_table=11 DALFDJ020000007.1 tpg gene 155262 156038 . - . ID=gene-O5D79_001807;Name=O5D79_001807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001807 DALFDJ020000007.1 Protein Homology CDS 155262 156038 . - 0 ID=cds-HJH9163317.1;Parent=gene-O5D79_001807;Dbxref=NCBI_GP:HJH9163317.1;Name=HJH9163317.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459750.1;locus_tag=O5D79_001807;product=ABC transporter ATP-binding protein;protein_id=HJH9163317.1;transl_table=11 DALFDJ020000007.1 tpg gene 156038 157117 . - . ID=gene-O5D79_001808;Name=O5D79_001808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001808 DALFDJ020000007.1 Protein Homology CDS 156038 157117 . - 0 ID=cds-HJH9163318.1;Parent=gene-O5D79_001808;Dbxref=NCBI_GP:HJH9163318.1;Name=HJH9163318.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459749.1;locus_tag=O5D79_001808;product=FecCD family ABC transporter permease;protein_id=HJH9163318.1;transl_table=11 DALFDJ020000007.1 tpg gene 157271 158323 . - . ID=gene-O5D79_001809;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=O5D79_001809 DALFDJ020000007.1 Protein Homology CDS 157271 158323 . - 0 ID=cds-HJH9163319.1;Parent=gene-O5D79_001809;Dbxref=NCBI_GP:HJH9163319.1;Name=HJH9163319.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=O5D79_001809;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=HJH9163319.1;transl_table=11 DALFDJ020000007.1 tpg gene 158643 159029 . + . ID=gene-O5D79_001810;Name=O5D79_001810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001810 DALFDJ020000007.1 Protein Homology CDS 158643 159029 . + 0 ID=cds-HJH9163320.1;Parent=gene-O5D79_001810;Dbxref=NCBI_GP:HJH9163320.1;Name=HJH9163320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459739.1;locus_tag=O5D79_001810;product=YbgS-like family protein;protein_id=HJH9163320.1;transl_table=11 DALFDJ020000007.1 tpg gene 159140 160078 . + . ID=gene-O5D79_001811;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=O5D79_001811 DALFDJ020000007.1 Protein Homology CDS 159140 160078 . + 0 ID=cds-HJH9163321.1;Parent=gene-O5D79_001811;Dbxref=NCBI_GP:HJH9163321.1;Name=HJH9163321.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459738.1;locus_tag=O5D79_001811;product=CDF family zinc transporter ZitB;protein_id=HJH9163321.1;transl_table=11 DALFDJ020000007.1 tpg gene 160075 160794 . - . ID=gene-O5D79_001812;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=O5D79_001812 DALFDJ020000007.1 Protein Homology CDS 160075 160794 . - 0 ID=cds-HJH9163322.1;Parent=gene-O5D79_001812;Dbxref=NCBI_GP:HJH9163322.1;Name=HJH9163322.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459737.1;locus_tag=O5D79_001812;product=nicotinamide riboside transporter PnuC;protein_id=HJH9163322.1;transl_table=11 DALFDJ020000007.1 tpg gene 160819 161862 . - . ID=gene-O5D79_001813;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=O5D79_001813 DALFDJ020000007.1 Protein Homology CDS 160819 161862 . - 0 ID=cds-HJH9163323.1;Parent=gene-O5D79_001813;Dbxref=NCBI_GP:HJH9163323.1;Name=HJH9163323.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459736.1;locus_tag=O5D79_001813;product=quinolinate synthase NadA;protein_id=HJH9163323.1;transl_table=11 DALFDJ020000007.1 tpg gene 162156 162283 . - . ID=gene-O5D79_001814;Name=O5D79_001814;gbkey=Gene;gene_biotype=ncRNA;locus_tag=O5D79_001814 DALFDJ020000007.1 cmsearch ncRNA 162156 162283 . - . ID=rna-O5D79_001814;Parent=gene-O5D79_001814;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_001814;product=RtT sRNA DALFDJ020000007.1 cmsearch exon 162156 162283 . - . ID=exon-O5D79_001814-1;Parent=rna-O5D79_001814;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_001814;product=RtT sRNA DALFDJ020000007.1 tpg gene 162412 162487 . - . ID=gene-O5D79_001815;Name=O5D79_001815;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_001815 DALFDJ020000007.1 tRNAscan-SE tRNA 162412 162487 . - . ID=rna-O5D79_001815;Parent=gene-O5D79_001815;anticodon=(pos:complement(162452..162454));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001815;product=tRNA-Lys DALFDJ020000007.1 tRNAscan-SE exon 162412 162487 . - . ID=exon-O5D79_001815-1;Parent=rna-O5D79_001815;anticodon=(pos:complement(162452..162454));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001815;product=tRNA-Lys DALFDJ020000007.1 tpg gene 162622 162697 . - . ID=gene-O5D79_001816;Name=O5D79_001816;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_001816 DALFDJ020000007.1 tRNAscan-SE tRNA 162622 162697 . - . ID=rna-O5D79_001816;Parent=gene-O5D79_001816;anticodon=(pos:complement(162662..162664));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001816;product=tRNA-Lys DALFDJ020000007.1 tRNAscan-SE exon 162622 162697 . - . ID=exon-O5D79_001816-1;Parent=rna-O5D79_001816;anticodon=(pos:complement(162662..162664));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001816;product=tRNA-Lys DALFDJ020000007.1 tpg gene 162840 162915 . - . ID=gene-O5D79_001817;Name=O5D79_001817;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_001817 DALFDJ020000007.1 tRNAscan-SE tRNA 162840 162915 . - . ID=rna-O5D79_001817;Parent=gene-O5D79_001817;anticodon=(pos:complement(162880..162882));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001817;product=tRNA-Lys DALFDJ020000007.1 tRNAscan-SE exon 162840 162915 . - . ID=exon-O5D79_001817-1;Parent=rna-O5D79_001817;anticodon=(pos:complement(162880..162882));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001817;product=tRNA-Lys DALFDJ020000007.1 tpg gene 162919 162994 . - . ID=gene-O5D79_001818;Name=O5D79_001818;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_001818 DALFDJ020000007.1 tRNAscan-SE tRNA 162919 162994 . - . ID=rna-O5D79_001818;Parent=gene-O5D79_001818;anticodon=(pos:complement(162959..162961));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001818;product=tRNA-Val DALFDJ020000007.1 tRNAscan-SE exon 162919 162994 . - . ID=exon-O5D79_001818-1;Parent=rna-O5D79_001818;anticodon=(pos:complement(162959..162961));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001818;product=tRNA-Val DALFDJ020000007.1 tpg gene 163131 163206 . - . ID=gene-O5D79_001819;Name=O5D79_001819;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_001819 DALFDJ020000007.1 tRNAscan-SE tRNA 163131 163206 . - . ID=rna-O5D79_001819;Parent=gene-O5D79_001819;anticodon=(pos:complement(163171..163173));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001819;product=tRNA-Lys DALFDJ020000007.1 tRNAscan-SE exon 163131 163206 . - . ID=exon-O5D79_001819-1;Parent=rna-O5D79_001819;anticodon=(pos:complement(163171..163173));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001819;product=tRNA-Lys DALFDJ020000007.1 tpg gene 163371 164159 . - . ID=gene-O5D79_001820;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=O5D79_001820 DALFDJ020000007.1 Protein Homology CDS 163371 164159 . - 0 ID=cds-HJH9163324.1;Parent=gene-O5D79_001820;Dbxref=NCBI_GP:HJH9163324.1;Name=HJH9163324.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459735.1;locus_tag=O5D79_001820;product=cell division protein CpoB;protein_id=HJH9163324.1;transl_table=11 DALFDJ020000007.1 tpg gene 164169 164693 . - . ID=gene-O5D79_001821;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=O5D79_001821 DALFDJ020000007.1 Protein Homology CDS 164169 164693 . - 0 ID=cds-HJH9163325.1;Parent=gene-O5D79_001821;Dbxref=NCBI_GP:HJH9163325.1;Name=HJH9163325.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459734.1;locus_tag=O5D79_001821;product=peptidoglycan-associated lipoprotein Pal;protein_id=HJH9163325.1;transl_table=11 DALFDJ020000007.1 tpg gene 164728 166020 . - . ID=gene-O5D79_001822;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=O5D79_001822 DALFDJ020000007.1 Protein Homology CDS 164728 166020 . - 0 ID=cds-HJH9163326.1;Parent=gene-O5D79_001822;Dbxref=NCBI_GP:HJH9163326.1;Name=HJH9163326.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=O5D79_001822;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=HJH9163326.1;transl_table=11 DALFDJ020000007.1 tpg gene 166144 167322 . - . ID=gene-O5D79_001823;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=O5D79_001823 DALFDJ020000007.1 Protein Homology CDS 166144 167322 . - 0 ID=cds-HJH9163327.1;Parent=gene-O5D79_001823;Dbxref=NCBI_GP:HJH9163327.1;Name=HJH9163327.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459732.1;locus_tag=O5D79_001823;product=cell envelope integrity protein TolA;protein_id=HJH9163327.1;transl_table=11 DALFDJ020000007.1 tpg gene 167387 167815 . - . ID=gene-O5D79_001824;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=O5D79_001824 DALFDJ020000007.1 Protein Homology CDS 167387 167815 . - 0 ID=cds-HJH9163328.1;Parent=gene-O5D79_001824;Dbxref=NCBI_GP:HJH9163328.1;Name=HJH9163328.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=O5D79_001824;product=colicin uptake protein TolR;protein_id=HJH9163328.1;transl_table=11 DALFDJ020000007.1 tpg gene 167819 168511 . - . ID=gene-O5D79_001825;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=O5D79_001825 DALFDJ020000007.1 Protein Homology CDS 167819 168511 . - 0 ID=cds-HJH9163329.1;Parent=gene-O5D79_001825;Dbxref=NCBI_GP:HJH9163329.1;Name=HJH9163329.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459730.1;locus_tag=O5D79_001825;product=Tol-Pal system protein TolQ;protein_id=HJH9163329.1;transl_table=11 DALFDJ020000007.1 tpg gene 168508 168912 . - . ID=gene-O5D79_001826;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=O5D79_001826 DALFDJ020000007.1 Protein Homology CDS 168508 168912 . - 0 ID=cds-HJH9163330.1;Parent=gene-O5D79_001826;Dbxref=NCBI_GP:HJH9163330.1;Name=HJH9163330.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459729.1;locus_tag=O5D79_001826;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=HJH9163330.1;transl_table=11 DALFDJ020000007.1 tpg gene 169141 169434 . - . ID=gene-O5D79_001827;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=O5D79_001827 DALFDJ020000007.1 Protein Homology CDS 169141 169434 . - 0 ID=cds-HJH9163331.1;Parent=gene-O5D79_001827;Dbxref=NCBI_GP:HJH9163331.1;Name=HJH9163331.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006712473.1;locus_tag=O5D79_001827;product=cyd operon protein YbgE;protein_id=HJH9163331.1;transl_table=11 DALFDJ020000007.1 tpg gene 169434 169547 . - . ID=gene-O5D79_001828;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=O5D79_001828 DALFDJ020000007.1 Protein Homology CDS 169434 169547 . - 0 ID=cds-HJH9163332.1;Parent=gene-O5D79_001828;Dbxref=NCBI_GP:HJH9163332.1;Name=HJH9163332.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459727.1;locus_tag=O5D79_001828;product=cytochrome bd-I oxidase subunit CydX;protein_id=HJH9163332.1;transl_table=11 DALFDJ020000007.1 tpg gene 169562 170701 . - . ID=gene-O5D79_001829;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=O5D79_001829 DALFDJ020000007.1 Protein Homology CDS 169562 170701 . - 0 ID=cds-HJH9163333.1;Parent=gene-O5D79_001829;Dbxref=NCBI_GP:HJH9163333.1;Name=HJH9163333.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=O5D79_001829;product=cytochrome d ubiquinol oxidase subunit II;protein_id=HJH9163333.1;transl_table=11 DALFDJ020000007.1 tpg gene 170717 172285 . - . ID=gene-O5D79_001830;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=O5D79_001830 DALFDJ020000007.1 Protein Homology CDS 170717 172285 . - 0 ID=cds-HJH9163334.1;Parent=gene-O5D79_001830;Dbxref=NCBI_GP:HJH9163334.1;Name=HJH9163334.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459725.1;locus_tag=O5D79_001830;product=cytochrome ubiquinol oxidase subunit I;protein_id=HJH9163334.1;transl_table=11 DALFDJ020000007.1 tpg gene 173868 174737 . - . ID=gene-O5D79_001831;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=O5D79_001831 DALFDJ020000007.1 Protein Homology CDS 173868 174737 . - 0 ID=cds-HJH9163335.1;Parent=gene-O5D79_001831;Dbxref=NCBI_GP:HJH9163335.1;Name=HJH9163335.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=O5D79_001831;product=succinate--CoA ligase subunit alpha;protein_id=HJH9163335.1;transl_table=11 DALFDJ020000007.1 tpg gene 174737 175903 . - . ID=gene-O5D79_001832;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=O5D79_001832 DALFDJ020000007.1 Protein Homology CDS 174737 175903 . - 0 ID=cds-HJH9163336.1;Parent=gene-O5D79_001832;Dbxref=NCBI_GP:HJH9163336.1;Name=HJH9163336.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=O5D79_001832;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=HJH9163336.1;transl_table=11 DALFDJ020000007.1 tpg gene 176045 177253 . - . ID=gene-O5D79_001833;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=O5D79_001833 DALFDJ020000007.1 Protein Homology CDS 176045 177253 . - 0 ID=cds-HJH9163337.1;Parent=gene-O5D79_001833;Dbxref=NCBI_GP:HJH9163337.1;Name=HJH9163337.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459722.1;locus_tag=O5D79_001833;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=HJH9163337.1;transl_table=11 DALFDJ020000007.1 tpg gene 177268 180069 . - . ID=gene-O5D79_001834;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=O5D79_001834 DALFDJ020000007.1 Protein Homology CDS 177268 180069 . - 0 ID=cds-HJH9163338.1;Parent=gene-O5D79_001834;Dbxref=NCBI_GP:HJH9163338.1;Name=HJH9163338.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459721.1;locus_tag=O5D79_001834;product=2-oxoglutarate dehydrogenase E1 component;protein_id=HJH9163338.1;transl_table=11 DALFDJ020000007.1 tpg gene 180595 181311 . - . ID=gene-O5D79_001835;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=O5D79_001835 DALFDJ020000007.1 Protein Homology CDS 180595 181311 . - 0 ID=cds-HJH9163339.1;Parent=gene-O5D79_001835;Dbxref=NCBI_GP:HJH9163339.1;Name=HJH9163339.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=O5D79_001835;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=HJH9163339.1;transl_table=11 DALFDJ020000007.1 tpg gene 181328 183094 . - . ID=gene-O5D79_001836;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=O5D79_001836 DALFDJ020000007.1 Protein Homology CDS 181328 183094 . - 0 ID=cds-HJH9163340.1;Parent=gene-O5D79_001836;Dbxref=NCBI_GP:HJH9163340.1;Name=HJH9163340.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=O5D79_001836;product=succinate dehydrogenase flavoprotein subunit;protein_id=HJH9163340.1;transl_table=11 DALFDJ020000007.1 tpg gene 183094 183441 . - . ID=gene-O5D79_001837;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=O5D79_001837 DALFDJ020000007.1 Protein Homology CDS 183094 183441 . - 0 ID=cds-HJH9163341.1;Parent=gene-O5D79_001837;Dbxref=NCBI_GP:HJH9163341.1;Name=HJH9163341.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=O5D79_001837;product=succinate dehydrogenase membrane anchor subunit;protein_id=HJH9163341.1;transl_table=11 DALFDJ020000007.1 tpg gene 183435 183839 . - . ID=gene-O5D79_001838;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=O5D79_001838 DALFDJ020000007.1 Protein Homology CDS 183435 183839 . - 0 ID=cds-HJH9163342.1;Parent=gene-O5D79_001838;Dbxref=NCBI_GP:HJH9163342.1;Name=HJH9163342.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=O5D79_001838;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=HJH9163342.1;transl_table=11 DALFDJ020000007.1 tpg gene 184222 184353 . + . ID=gene-O5D79_001839;Name=O5D79_001839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001839 DALFDJ020000007.1 Protein Homology CDS 184222 184353 . + 0 ID=cds-HJH9163343.1;Parent=gene-O5D79_001839;Dbxref=NCBI_GP:HJH9163343.1;Name=HJH9163343.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049035.1;locus_tag=O5D79_001839;product=hypothetical protein;protein_id=HJH9163343.1;transl_table=11 DALFDJ020000007.1 tpg gene 184579 185862 . + . ID=gene-O5D79_001840;Name=O5D79_001840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001840 DALFDJ020000007.1 Protein Homology CDS 184579 185862 . + 0 ID=cds-HJH9163344.1;Parent=gene-O5D79_001840;Dbxref=NCBI_GP:HJH9163344.1;Name=HJH9163344.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459715.1;locus_tag=O5D79_001840;product=citrate synthase;protein_id=HJH9163344.1;transl_table=11 DALFDJ020000007.1 tpg gene 185999 187045 . + . ID=gene-O5D79_001841;Name=O5D79_001841;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001841 DALFDJ020000007.1 Protein Homology CDS 185999 187045 . + 0 ID=cds-HJH9163345.1;Parent=gene-O5D79_001841;Dbxref=NCBI_GP:HJH9163345.1;Name=HJH9163345.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459714.1;locus_tag=O5D79_001841;product=AbrB family transcriptional regulator;protein_id=HJH9163345.1;transl_table=11 DALFDJ020000007.1 tpg gene 187100 187891 . - . ID=gene-O5D79_001842;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=O5D79_001842 DALFDJ020000007.1 Protein Homology CDS 187100 187891 . - 0 ID=cds-HJH9163346.1;Parent=gene-O5D79_001842;Dbxref=NCBI_GP:HJH9163346.1;Name=HJH9163346.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459713.1;locus_tag=O5D79_001842;product=endonuclease VIII;protein_id=HJH9163346.1;transl_table=11 DALFDJ020000007.1 tpg gene 187940 188077 . - . ID=gene-O5D79_001843;Name=O5D79_001843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001843 DALFDJ020000007.1 Protein Homology CDS 187940 188077 . - 0 ID=cds-HJH9163347.1;Parent=gene-O5D79_001843;Dbxref=NCBI_GP:HJH9163347.1;Name=HJH9163347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459712.1;locus_tag=O5D79_001843;product=hypothetical protein;protein_id=HJH9163347.1;transl_table=11 DALFDJ020000007.1 tpg gene 188145 190040 . - . ID=gene-O5D79_001844;Name=O5D79_001844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001844 DALFDJ020000007.1 Protein Homology CDS 188145 190040 . - 0 ID=cds-HJH9163348.1;Parent=gene-O5D79_001844;Dbxref=NCBI_GP:HJH9163348.1;Name=HJH9163348.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459711.1;locus_tag=O5D79_001844;product=HAD family hydrolase;protein_id=HJH9163348.1;transl_table=11 DALFDJ020000007.1 tpg gene 190098 190931 . - . ID=gene-O5D79_001845;Name=O5D79_001845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001845 DALFDJ020000007.1 Protein Homology CDS 190098 190931 . - 0 ID=cds-HJH9163349.1;Parent=gene-O5D79_001845;Dbxref=NCBI_GP:HJH9163349.1;Name=HJH9163349.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459710.1;locus_tag=O5D79_001845;product=glycosyltransferase family A protein;protein_id=HJH9163349.1;transl_table=11 ##sequence-region DALFDJ020000008.1 1 182684 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000008.1 tpg region 1 182684 . + . ID=DALFDJ020000008.1:1..182684;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000008.1 tpg gene 1 1114 . + . ID=gene-O5D79_001846;Name=O5D79_001846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001846;partial=true;start_range=.,1 DALFDJ020000008.1 Protein Homology CDS 1 1114 . + 1 ID=cds-HJH9163350.1;Parent=gene-O5D79_001846;Dbxref=NCBI_GP:HJH9163350.1;Name=HJH9163350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=O5D79_001846;partial=true;product=cytochrome c-type biogenesis CcmF C-terminal domain-containing protein;protein_id=HJH9163350.1;start_range=.,1;transl_table=11 DALFDJ020000008.1 tpg gene 1111 1668 . + . ID=gene-O5D79_001847;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=O5D79_001847 DALFDJ020000008.1 Protein Homology CDS 1111 1668 . + 0 ID=cds-HJH9163351.1;Parent=gene-O5D79_001847;Dbxref=NCBI_GP:HJH9163351.1;Name=HJH9163351.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=O5D79_001847;product=thiol:disulfide interchange protein DsbE;protein_id=HJH9163351.1;transl_table=11 DALFDJ020000008.1 tpg gene 1665 2708 . + . ID=gene-O5D79_001848;Name=O5D79_001848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001848 DALFDJ020000008.1 Protein Homology CDS 1665 2708 . + 0 ID=cds-HJH9163352.1;Parent=gene-O5D79_001848;Dbxref=NCBI_GP:HJH9163352.1;Name=HJH9163352.1;Ontology_term=GO:0017004,GO:0015035,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=protein-disulfide reductase activity|0015035||IEA,metal ion binding|0046872||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462712.1;locus_tag=O5D79_001848;product=cytochrome c-type biogenesis protein CcmH;protein_id=HJH9163352.1;transl_table=11 DALFDJ020000008.1 tpg gene 2830 4056 . + . ID=gene-O5D79_001849;Name=O5D79_001849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001849 DALFDJ020000008.1 Protein Homology CDS 2830 4056 . + 0 ID=cds-HJH9163353.1;Parent=gene-O5D79_001849;Dbxref=NCBI_GP:HJH9163353.1;Name=HJH9163353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462711.1;locus_tag=O5D79_001849;product=DUF3748 domain-containing protein;protein_id=HJH9163353.1;transl_table=11 DALFDJ020000008.1 tpg gene 4058 4390 . - . ID=gene-O5D79_001850;Name=O5D79_001850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001850 DALFDJ020000008.1 Protein Homology CDS 4058 4390 . - 0 ID=cds-HJH9163354.1;Parent=gene-O5D79_001850;Dbxref=NCBI_GP:HJH9163354.1;Name=HJH9163354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675643.1;locus_tag=O5D79_001850;product=YceK/YidQ family lipoprotein;protein_id=HJH9163354.1;transl_table=11 DALFDJ020000008.1 cmsearch sequence_feature 4633 4706 . + . ID=id-DALFDJ020000008.1:4633..4706;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 DALFDJ020000008.1 tpg gene 4700 5113 . + . ID=gene-O5D79_001851;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=O5D79_001851 DALFDJ020000008.1 Protein Homology CDS 4700 5113 . + 0 ID=cds-HJH9163355.1;Parent=gene-O5D79_001851;Dbxref=NCBI_GP:HJH9163355.1;Name=HJH9163355.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=O5D79_001851;product=small heat shock chaperone IbpA;protein_id=HJH9163355.1;transl_table=11 DALFDJ020000008.1 tpg gene 5223 5651 . + . ID=gene-O5D79_001852;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=O5D79_001852 DALFDJ020000008.1 Protein Homology CDS 5223 5651 . + 0 ID=cds-HJH9163356.1;Parent=gene-O5D79_001852;Dbxref=NCBI_GP:HJH9163356.1;Name=HJH9163356.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=O5D79_001852;product=small heat shock chaperone IbpB;protein_id=HJH9163356.1;transl_table=11 DALFDJ020000008.1 tpg gene 5840 7501 . + . ID=gene-O5D79_001853;Name=O5D79_001853;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001853 DALFDJ020000008.1 Protein Homology CDS 5840 7501 . + 0 ID=cds-HJH9163357.1;Parent=gene-O5D79_001853;Dbxref=NCBI_GP:HJH9163357.1;Name=HJH9163357.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462707.1;locus_tag=O5D79_001853;product=putative transporter;protein_id=HJH9163357.1;transl_table=11 DALFDJ020000008.1 tpg gene 7944 8291 . + . ID=gene-O5D79_001854;Name=O5D79_001854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001854 DALFDJ020000008.1 Protein Homology CDS 7944 8291 . + 0 ID=cds-HJH9163358.1;Parent=gene-O5D79_001854;Dbxref=NCBI_GP:HJH9163358.1;Name=HJH9163358.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=O5D79_001854;product=YidH family protein;protein_id=HJH9163358.1;transl_table=11 DALFDJ020000008.1 tpg gene 8281 8643 . + . ID=gene-O5D79_001855;Name=O5D79_001855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001855 DALFDJ020000008.1 Protein Homology CDS 8281 8643 . + 0 ID=cds-HJH9163359.1;Parent=gene-O5D79_001855;Dbxref=NCBI_GP:HJH9163359.1;Name=HJH9163359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462705.1;locus_tag=O5D79_001855;product=DUF202 domain-containing protein;protein_id=HJH9163359.1;transl_table=11 DALFDJ020000008.1 tpg gene 8640 9170 . + . ID=gene-O5D79_001856;Name=O5D79_001856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001856 DALFDJ020000008.1 Protein Homology CDS 8640 9170 . + 0 ID=cds-HJH9163360.1;Parent=gene-O5D79_001856;Dbxref=NCBI_GP:HJH9163360.1;Name=HJH9163360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462704.1;locus_tag=O5D79_001856;product=radical SAM protein;protein_id=HJH9163360.1;transl_table=11 DALFDJ020000008.1 tpg gene 9252 10574 . - . ID=gene-O5D79_001857;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=O5D79_001857 DALFDJ020000008.1 Protein Homology CDS 9252 10574 . - 0 ID=cds-HJH9163361.1;Parent=gene-O5D79_001857;Dbxref=NCBI_GP:HJH9163361.1;Name=HJH9163361.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462703.1;locus_tag=O5D79_001857;product=D-serine ammonia-lyase;protein_id=HJH9163361.1;transl_table=11 DALFDJ020000008.1 tpg gene 10592 11929 . - . ID=gene-O5D79_001858;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=O5D79_001858 DALFDJ020000008.1 Protein Homology CDS 10592 11929 . - 0 ID=cds-HJH9163362.1;Parent=gene-O5D79_001858;Dbxref=NCBI_GP:HJH9163362.1;Name=HJH9163362.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462702.1;locus_tag=O5D79_001858;product=D-serine transporter DsdX;protein_id=HJH9163362.1;transl_table=11 DALFDJ020000008.1 tpg gene 12155 13078 . + . ID=gene-O5D79_001859;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=O5D79_001859 DALFDJ020000008.1 Protein Homology CDS 12155 13078 . + 0 ID=cds-HJH9163363.1;Parent=gene-O5D79_001859;Dbxref=NCBI_GP:HJH9163363.1;Name=HJH9163363.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462701.1;locus_tag=O5D79_001859;product=DNA-binding transcriptional regulator DsdC;protein_id=HJH9163363.1;transl_table=11 DALFDJ020000008.1 tpg gene 13142 14227 . + . ID=gene-O5D79_001860;Name=O5D79_001860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001860 DALFDJ020000008.1 Protein Homology CDS 13142 14227 . + 0 ID=cds-HJH9163364.1;Parent=gene-O5D79_001860;Dbxref=NCBI_GP:HJH9163364.1;Name=HJH9163364.1;Ontology_term=GO:0000272,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462700.1;locus_tag=O5D79_001860;product=cellulase family glycosylhydrolase;protein_id=HJH9163364.1;transl_table=11 DALFDJ020000008.1 tpg gene 14154 15338 . - . ID=gene-O5D79_001861;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=O5D79_001861 DALFDJ020000008.1 Protein Homology CDS 14154 15338 . - 0 ID=cds-HJH9163365.1;Parent=gene-O5D79_001861;Dbxref=NCBI_GP:HJH9163365.1;Name=HJH9163365.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462699.1;locus_tag=O5D79_001861;product=multidrug efflux MFS transporter EmrD;protein_id=HJH9163365.1;transl_table=11 DALFDJ020000008.1 tpg gene 15541 16401 . - . ID=gene-O5D79_001862;Name=O5D79_001862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001862 DALFDJ020000008.1 Protein Homology CDS 15541 16401 . - 0 ID=cds-HJH9163366.1;Parent=gene-O5D79_001862;Dbxref=NCBI_GP:HJH9163366.1;Name=HJH9163366.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462698.3;locus_tag=O5D79_001862;product=EamA family transporter;protein_id=HJH9163366.1;transl_table=11 DALFDJ020000008.1 tpg gene 16494 16583 . - . ID=gene-O5D79_001863;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=O5D79_001863 DALFDJ020000008.1 Protein Homology CDS 16494 16583 . - 0 ID=cds-HJH9163367.1;Parent=gene-O5D79_001863;Dbxref=NCBI_GP:HJH9163367.1;Name=HJH9163367.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=O5D79_001863;product=type I toxin-antitoxin system toxin TisB;protein_id=HJH9163367.1;transl_table=11 DALFDJ020000008.1 tpg pseudogene 16580 16694 . - . ID=gene-O5D79_001864;Name=O5D79_001864;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001864;pseudo=true DALFDJ020000008.1 Protein Homology CDS 16580 16694 . - 0 ID=cds-O5D79_001864;Parent=gene-O5D79_001864;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009325922.1;locus_tag=O5D79_001864;product=hypothetical protein;pseudo=true;transl_table=11 DALFDJ020000008.1 tpg gene 17217 17315 . + . ID=gene-O5D79_001865;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=O5D79_001865 DALFDJ020000008.1 Protein Homology CDS 17217 17315 . + 0 ID=cds-HJH9163368.1;Parent=gene-O5D79_001865;Dbxref=NCBI_GP:HJH9163368.1;Name=HJH9163368.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462696.1;locus_tag=O5D79_001865;product=ilvB operon leader peptide IvbL;protein_id=HJH9163368.1;transl_table=11 DALFDJ020000008.1 tpg gene 17422 19110 . + . ID=gene-O5D79_001866;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=O5D79_001866 DALFDJ020000008.1 Protein Homology CDS 17422 19110 . + 0 ID=cds-HJH9163369.1;Parent=gene-O5D79_001866;Dbxref=NCBI_GP:HJH9163369.1;Name=HJH9163369.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=O5D79_001866;product=acetolactate synthase large subunit;protein_id=HJH9163369.1;transl_table=11 DALFDJ020000008.1 tpg gene 19114 19404 . + . ID=gene-O5D79_001867;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=O5D79_001867 DALFDJ020000008.1 Protein Homology CDS 19114 19404 . + 0 ID=cds-HJH9163370.1;Parent=gene-O5D79_001867;Dbxref=NCBI_GP:HJH9163370.1;Name=HJH9163370.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462694.1;locus_tag=O5D79_001867;product=acetolactate synthase small subunit;protein_id=HJH9163370.1;transl_table=11 DALFDJ020000008.1 tpg gene 19406 20191 . - . ID=gene-O5D79_001868;Name=O5D79_001868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001868 DALFDJ020000008.1 Protein Homology CDS 19406 20191 . - 0 ID=cds-HJH9163371.1;Parent=gene-O5D79_001868;Dbxref=NCBI_GP:HJH9163371.1;Name=HJH9163371.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462693.1;locus_tag=O5D79_001868;product=DeoR family transcriptional regulator;protein_id=HJH9163371.1;transl_table=11 DALFDJ020000008.1 tpg gene 20516 21436 . + . ID=gene-O5D79_001869;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=O5D79_001869 DALFDJ020000008.1 Protein Homology CDS 20516 21436 . + 0 ID=cds-HJH9163372.1;Parent=gene-O5D79_001869;Dbxref=NCBI_GP:HJH9163372.1;Name=HJH9163372.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462692.1;locus_tag=O5D79_001869;product=ribokinase;protein_id=HJH9163372.1;transl_table=11 DALFDJ020000008.1 tpg gene 21467 22783 . + . ID=gene-O5D79_001870;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=O5D79_001870 DALFDJ020000008.1 Protein Homology CDS 21467 22783 . + 0 ID=cds-HJH9163373.1;Parent=gene-O5D79_001870;Dbxref=NCBI_GP:HJH9163373.1;Name=HJH9163373.1;Ontology_term=GO:0015756,GO:0015150,GO:0015535;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA,fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462691.1;locus_tag=O5D79_001870;product=L-fucose:H+ symporter permease;protein_id=HJH9163373.1;transl_table=11 DALFDJ020000008.1 tpg gene 22795 23808 . + . ID=gene-O5D79_001871;Name=O5D79_001871;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001871 DALFDJ020000008.1 Protein Homology CDS 22795 23808 . + 0 ID=cds-HJH9163374.1;Parent=gene-O5D79_001871;Dbxref=NCBI_GP:HJH9163374.1;Name=HJH9163374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462690.1;locus_tag=O5D79_001871;product=aldose 1-epimerase family protein;protein_id=HJH9163374.1;transl_table=11 DALFDJ020000008.1 tpg gene 23962 24552 . + . ID=gene-O5D79_001872;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=O5D79_001872 DALFDJ020000008.1 Protein Homology CDS 23962 24552 . + 0 ID=cds-HJH9163375.1;Parent=gene-O5D79_001872;Dbxref=NCBI_GP:HJH9163375.1;Name=HJH9163375.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462689.1;locus_tag=O5D79_001872;product=transcriptional regulator UhpA;protein_id=HJH9163375.1;transl_table=11 DALFDJ020000008.1 tpg gene 24552 26054 . + . ID=gene-O5D79_001873;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=O5D79_001873 DALFDJ020000008.1 Protein Homology CDS 24552 26054 . + 0 ID=cds-HJH9163376.1;Parent=gene-O5D79_001873;Dbxref=NCBI_GP:HJH9163376.1;Name=HJH9163376.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462688.1;locus_tag=O5D79_001873;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=HJH9163376.1;transl_table=11 DALFDJ020000008.1 tpg gene 26064 27392 . + . ID=gene-O5D79_001874;Name=O5D79_001874;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001874 DALFDJ020000008.1 Protein Homology CDS 26064 27392 . + 0 ID=cds-HJH9163377.1;Parent=gene-O5D79_001874;Dbxref=NCBI_GP:HJH9163377.1;Name=HJH9163377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462687.1;locus_tag=O5D79_001874;product=MFS transporter;protein_id=HJH9163377.1;transl_table=11 DALFDJ020000008.1 tpg gene 27535 28926 . + . ID=gene-O5D79_001875;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=O5D79_001875 DALFDJ020000008.1 Protein Homology CDS 27535 28926 . + 0 ID=cds-HJH9163378.1;Parent=gene-O5D79_001875;Dbxref=NCBI_GP:HJH9163378.1;Name=HJH9163378.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=O5D79_001875;product=hexose-6-phosphate:phosphate antiporter;protein_id=HJH9163378.1;transl_table=11 DALFDJ020000008.1 tpg gene 29119 29571 . + . ID=gene-O5D79_001876;Name=O5D79_001876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001876 DALFDJ020000008.1 Protein Homology CDS 29119 29571 . + 0 ID=cds-HJH9163379.1;Parent=gene-O5D79_001876;Dbxref=NCBI_GP:HJH9163379.1;Name=HJH9163379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462685.1;locus_tag=O5D79_001876;product=DUF1198 domain-containing protein;protein_id=HJH9163379.1;transl_table=11 DALFDJ020000008.1 tpg gene 29924 30667 . + . ID=gene-O5D79_001877;Name=O5D79_001877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001877 DALFDJ020000008.1 Protein Homology CDS 29924 30667 . + 0 ID=cds-HJH9163380.1;Parent=gene-O5D79_001877;Dbxref=NCBI_GP:HJH9163380.1;Name=HJH9163380.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462684.1;locus_tag=O5D79_001877;product=GntR family transcriptional regulator;protein_id=HJH9163380.1;transl_table=11 DALFDJ020000008.1 tpg gene 30685 31158 . + . ID=gene-O5D79_001878;Name=O5D79_001878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001878 DALFDJ020000008.1 Protein Homology CDS 30685 31158 . + 0 ID=cds-HJH9163381.1;Parent=gene-O5D79_001878;Dbxref=NCBI_GP:HJH9163381.1;Name=HJH9163381.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462683.1;locus_tag=O5D79_001878;product=PTS sugar transporter subunit IIA;protein_id=HJH9163381.1;transl_table=11 DALFDJ020000008.1 tpg gene 31155 31442 . + . ID=gene-O5D79_001879;Name=O5D79_001879;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001879 DALFDJ020000008.1 Protein Homology CDS 31155 31442 . + 0 ID=cds-HJH9163382.1;Parent=gene-O5D79_001879;Dbxref=NCBI_GP:HJH9163382.1;Name=HJH9163382.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462682.1;locus_tag=O5D79_001879;product=PTS sugar transporter subunit IIB;protein_id=HJH9163382.1;transl_table=11 DALFDJ020000008.1 tpg gene 31518 32876 . + . ID=gene-O5D79_001880;Name=O5D79_001880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001880 DALFDJ020000008.1 Protein Homology CDS 31518 32876 . + 0 ID=cds-HJH9163383.1;Parent=gene-O5D79_001880;Dbxref=NCBI_GP:HJH9163383.1;Name=HJH9163383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462681.1;locus_tag=O5D79_001880;product=PTS galactitol transporter subunit IIC;protein_id=HJH9163383.1;transl_table=11 DALFDJ020000008.1 tpg gene 32869 34353 . + . ID=gene-O5D79_001881;Name=O5D79_001881;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001881 DALFDJ020000008.1 Protein Homology CDS 32869 34353 . + 0 ID=cds-HJH9163384.1;Parent=gene-O5D79_001881;Dbxref=NCBI_GP:HJH9163384.1;Name=HJH9163384.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462680.1;locus_tag=O5D79_001881;product=FGGY-family carbohydrate kinase;protein_id=HJH9163384.1;transl_table=11 DALFDJ020000008.1 tpg gene 34416 35276 . + . ID=gene-O5D79_001882;Name=O5D79_001882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001882 DALFDJ020000008.1 Protein Homology CDS 34416 35276 . + 0 ID=cds-HJH9163385.1;Parent=gene-O5D79_001882;Dbxref=NCBI_GP:HJH9163385.1;Name=HJH9163385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462679.1;locus_tag=O5D79_001882;product=class II aldolase;protein_id=HJH9163385.1;transl_table=11 DALFDJ020000008.1 tpg gene 35286 35555 . + . ID=gene-O5D79_001883;Name=O5D79_001883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001883 DALFDJ020000008.1 Protein Homology CDS 35286 35555 . + 0 ID=cds-HJH9163386.1;Parent=gene-O5D79_001883;Dbxref=NCBI_GP:HJH9163386.1;Name=HJH9163386.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462678.1;locus_tag=O5D79_001883;product=HPr family phosphocarrier protein;protein_id=HJH9163386.1;transl_table=11 DALFDJ020000008.1 tpg gene 35717 35878 . + . ID=gene-O5D79_001884;Name=O5D79_001884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001884 DALFDJ020000008.1 Protein Homology CDS 35717 35878 . + 0 ID=cds-HJH9163387.1;Parent=gene-O5D79_001884;Dbxref=NCBI_GP:HJH9163387.1;Name=HJH9163387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343619.1;locus_tag=O5D79_001884;product=hypothetical protein;protein_id=HJH9163387.1;transl_table=11 DALFDJ020000008.1 tpg gene 35906 36685 . - . ID=gene-O5D79_001885;Name=O5D79_001885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001885 DALFDJ020000008.1 Protein Homology CDS 35906 36685 . - 0 ID=cds-HJH9163388.1;Parent=gene-O5D79_001885;Dbxref=NCBI_GP:HJH9163388.1;Name=HJH9163388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002912948.1;locus_tag=O5D79_001885;product=LEM-3-like GIY-YIG domain-containing protein;protein_id=HJH9163388.1;transl_table=11 DALFDJ020000008.1 tpg gene 36870 37193 . - . ID=gene-O5D79_001886;Name=O5D79_001886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001886 DALFDJ020000008.1 Protein Homology CDS 36870 37193 . - 0 ID=cds-HJH9163389.1;Parent=gene-O5D79_001886;Dbxref=NCBI_GP:HJH9163389.1;Name=HJH9163389.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462677.1;locus_tag=O5D79_001886;product=helix-turn-helix domain-containing protein;protein_id=HJH9163389.1;transl_table=11 DALFDJ020000008.1 tpg gene 37177 37536 . - . ID=gene-O5D79_001887;Name=O5D79_001887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001887 DALFDJ020000008.1 Protein Homology CDS 37177 37536 . - 0 ID=cds-HJH9163390.1;Parent=gene-O5D79_001887;Dbxref=NCBI_GP:HJH9163390.1;Name=HJH9163390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462676.1;locus_tag=O5D79_001887;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=HJH9163390.1;transl_table=11 DALFDJ020000008.1 tpg gene 37752 38945 . + . ID=gene-O5D79_001888;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=O5D79_001888 DALFDJ020000008.1 Protein Homology CDS 37752 38945 . + 0 ID=cds-HJH9163391.1;Parent=gene-O5D79_001888;Dbxref=NCBI_GP:HJH9163391.1;Name=HJH9163391.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462675.1;locus_tag=O5D79_001888;product=purine ribonucleoside efflux pump NepI;protein_id=HJH9163391.1;transl_table=11 DALFDJ020000008.1 tpg gene 39004 40386 . - . ID=gene-O5D79_001889;Name=O5D79_001889;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001889 DALFDJ020000008.1 Protein Homology CDS 39004 40386 . - 0 ID=cds-HJH9163392.1;Parent=gene-O5D79_001889;Dbxref=NCBI_GP:HJH9163392.1;Name=HJH9163392.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462674.1;locus_tag=O5D79_001889;product=glycoside hydrolase family 1 protein;protein_id=HJH9163392.1;transl_table=11 DALFDJ020000008.1 tpg gene 40492 40785 . - . ID=gene-O5D79_001890;Name=O5D79_001890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001890 DALFDJ020000008.1 Protein Homology CDS 40492 40785 . - 0 ID=cds-HJH9163393.1;Parent=gene-O5D79_001890;Dbxref=NCBI_GP:HJH9163393.1;Name=HJH9163393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462673.1;locus_tag=O5D79_001890;product=YicS family protein;protein_id=HJH9163393.1;transl_table=11 DALFDJ020000008.1 tpg gene 40982 43780 . + . ID=gene-O5D79_001891;Name=dagR;gbkey=Gene;gene=dagR;gene_biotype=protein_coding;locus_tag=O5D79_001891 DALFDJ020000008.1 Protein Homology CDS 40982 43780 . + 0 ID=cds-HJH9163394.1;Parent=gene-O5D79_001891;Dbxref=NCBI_GP:HJH9163394.1;Name=HJH9163394.1;Ontology_term=GO:0006355,GO:0009401,GO:0005524,GO:0016887;gbkey=CDS;gene=dagR;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462672.1;locus_tag=O5D79_001891;product=transcriptional regulator DagR;protein_id=HJH9163394.1;transl_table=11 DALFDJ020000008.1 tpg gene 43999 44424 . + . ID=gene-O5D79_001892;Name=O5D79_001892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001892 DALFDJ020000008.1 Protein Homology CDS 43999 44424 . + 0 ID=cds-HJH9163395.1;Parent=gene-O5D79_001892;Dbxref=NCBI_GP:HJH9163395.1;Name=HJH9163395.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462671.1;locus_tag=O5D79_001892;product=PTS sugar transporter subunit IIA;protein_id=HJH9163395.1;transl_table=11 DALFDJ020000008.1 tpg gene 44435 44920 . + . ID=gene-O5D79_001893;Name=O5D79_001893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001893 DALFDJ020000008.1 Protein Homology CDS 44435 44920 . + 0 ID=cds-HJH9163396.1;Parent=gene-O5D79_001893;Dbxref=NCBI_GP:HJH9163396.1;Name=HJH9163396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462670.1;locus_tag=O5D79_001893;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=HJH9163396.1;transl_table=11 DALFDJ020000008.1 tpg gene 45066 45815 . + . ID=gene-O5D79_001894;Name=O5D79_001894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001894 DALFDJ020000008.1 Protein Homology CDS 45066 45815 . + 0 ID=cds-HJH9163397.1;Parent=gene-O5D79_001894;Dbxref=NCBI_GP:HJH9163397.1;Name=HJH9163397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462669.1;locus_tag=O5D79_001894;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=HJH9163397.1;transl_table=11 DALFDJ020000008.1 tpg gene 45812 46672 . + . ID=gene-O5D79_001895;Name=O5D79_001895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001895 DALFDJ020000008.1 Protein Homology CDS 45812 46672 . + 0 ID=cds-HJH9163398.1;Parent=gene-O5D79_001895;Dbxref=NCBI_GP:HJH9163398.1;Name=HJH9163398.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462668.3;locus_tag=O5D79_001895;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=HJH9163398.1;transl_table=11 DALFDJ020000008.1 tpg gene 46676 47785 . + . ID=gene-O5D79_001896;Name=dgaE;gbkey=Gene;gene=dgaE;gene_biotype=protein_coding;locus_tag=O5D79_001896 DALFDJ020000008.1 Protein Homology CDS 46676 47785 . + 0 ID=cds-HJH9163399.1;Parent=gene-O5D79_001896;Dbxref=NCBI_GP:HJH9163399.1;Name=HJH9163399.1;Ontology_term=GO:0016829;gbkey=CDS;gene=dgaE;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462667.1;locus_tag=O5D79_001896;product=D-glucosaminate-6-phosphate ammonia lyase;protein_id=HJH9163399.1;transl_table=11 DALFDJ020000008.1 tpg gene 47772 48515 . + . ID=gene-O5D79_001897;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=O5D79_001897 DALFDJ020000008.1 Protein Homology CDS 47772 48515 . + 0 ID=cds-HJH9163400.1;Parent=gene-O5D79_001897;Dbxref=NCBI_GP:HJH9163400.1;Name=HJH9163400.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462666.1;locus_tag=O5D79_001897;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=HJH9163400.1;transl_table=11 DALFDJ020000008.1 tpg gene 48751 49680 . + . ID=gene-O5D79_001898;Name=O5D79_001898;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001898 DALFDJ020000008.1 Protein Homology CDS 48751 49680 . + 0 ID=cds-HJH9163401.1;Parent=gene-O5D79_001898;Dbxref=NCBI_GP:HJH9163401.1;Name=HJH9163401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462665.1;locus_tag=O5D79_001898;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=HJH9163401.1;transl_table=11 DALFDJ020000008.1 tpg gene 49723 50625 . - . ID=gene-O5D79_001899;Name=O5D79_001899;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001899 DALFDJ020000008.1 Protein Homology CDS 49723 50625 . - 0 ID=cds-HJH9163402.1;Parent=gene-O5D79_001899;Dbxref=NCBI_GP:HJH9163402.1;Name=HJH9163402.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462664.1;locus_tag=O5D79_001899;product=EamA family transporter;protein_id=HJH9163402.1;transl_table=11 DALFDJ020000008.1 tpg gene 51131 51826 . + . ID=gene-O5D79_001900;Name=O5D79_001900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001900 DALFDJ020000008.1 Protein Homology CDS 51131 51826 . + 0 ID=cds-HJH9163403.1;Parent=gene-O5D79_001900;Dbxref=NCBI_GP:HJH9163403.1;Name=HJH9163403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462663.1;locus_tag=O5D79_001900;product=MgtC family protein;protein_id=HJH9163403.1;transl_table=11 DALFDJ020000008.1 tpg gene 52044 54770 . + . ID=gene-O5D79_001901;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=O5D79_001901 DALFDJ020000008.1 Protein Homology CDS 52044 54770 . + 0 ID=cds-HJH9163404.1;Parent=gene-O5D79_001901;Dbxref=NCBI_GP:HJH9163404.1;Name=HJH9163404.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462662.1;locus_tag=O5D79_001901;product=magnesium-translocating P-type ATPase;protein_id=HJH9163404.1;transl_table=11 DALFDJ020000008.1 tpg gene 54792 54884 . + . ID=gene-O5D79_001902;Name=mgtR;gbkey=Gene;gene=mgtR;gene_biotype=protein_coding;locus_tag=O5D79_001902 DALFDJ020000008.1 Protein Homology CDS 54792 54884 . + 0 ID=cds-HJH9163405.1;Parent=gene-O5D79_001902;Dbxref=NCBI_GP:HJH9163405.1;Name=HJH9163405.1;gbkey=CDS;gene=mgtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082117.1;locus_tag=O5D79_001902;product=protein MgtR;protein_id=HJH9163405.1;transl_table=11 DALFDJ020000008.1 tpg gene 54897 54983 . + . ID=gene-O5D79_001903;Name=mgtU;gbkey=Gene;gene=mgtU;gene_biotype=protein_coding;locus_tag=O5D79_001903 DALFDJ020000008.1 Protein Homology CDS 54897 54983 . + 0 ID=cds-HJH9163406.1;Parent=gene-O5D79_001903;Dbxref=NCBI_GP:HJH9163406.1;Name=HJH9163406.1;gbkey=CDS;gene=mgtU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_251009859.1;locus_tag=O5D79_001903;product=magnesium transporter protection protein MgtU;protein_id=HJH9163406.1;transl_table=11 DALFDJ020000008.1 tpg gene 55085 55564 . + . ID=gene-O5D79_001904;Name=cigR;gbkey=Gene;gene=cigR;gene_biotype=protein_coding;locus_tag=O5D79_001904 DALFDJ020000008.1 Protein Homology CDS 55085 55564 . + 0 ID=cds-HJH9163407.1;Parent=gene-O5D79_001904;Dbxref=NCBI_GP:HJH9163407.1;Name=HJH9163407.1;gbkey=CDS;gene=cigR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462661.1;locus_tag=O5D79_001904;product=anti-virulence regulatory inner membrane protein CigR;protein_id=HJH9163407.1;transl_table=11 DALFDJ020000008.1 tpg gene 55793 56473 . - . ID=gene-O5D79_001905;Name=O5D79_001905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001905 DALFDJ020000008.1 Protein Homology CDS 55793 56473 . - 0 ID=cds-HJH9163408.1;Parent=gene-O5D79_001905;Dbxref=NCBI_GP:HJH9163408.1;Name=HJH9163408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462660.1;locus_tag=O5D79_001905;product=isochorismatase family protein;protein_id=HJH9163408.1;transl_table=11 DALFDJ020000008.1 tpg gene 57257 58114 . + . ID=gene-O5D79_001906;Name=O5D79_001906;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001906 DALFDJ020000008.1 Protein Homology CDS 57257 58114 . + 0 ID=cds-HJH9163409.1;Parent=gene-O5D79_001906;Dbxref=NCBI_GP:HJH9163409.1;Name=HJH9163409.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462658.4;locus_tag=O5D79_001906;product=winged helix-turn-helix domain-containing protein;protein_id=HJH9163409.1;transl_table=11 DALFDJ020000008.1 tpg gene 58125 58589 . + . ID=gene-O5D79_001907;Name=O5D79_001907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001907 DALFDJ020000008.1 Protein Homology CDS 58125 58589 . + 0 ID=cds-HJH9163410.1;Parent=gene-O5D79_001907;Dbxref=NCBI_GP:HJH9163410.1;Name=HJH9163410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462657.1;locus_tag=O5D79_001907;product=hypothetical protein;protein_id=HJH9163410.1;transl_table=11 DALFDJ020000008.1 tpg gene 58684 61551 . - . ID=gene-O5D79_001908;Name=misL;gbkey=Gene;gene=misL;gene_biotype=protein_coding;locus_tag=O5D79_001908 DALFDJ020000008.1 Protein Homology CDS 58684 61551 . - 0 ID=cds-HJH9163411.1;Parent=gene-O5D79_001908;Dbxref=NCBI_GP:HJH9163411.1;Name=HJH9163411.1;gbkey=CDS;gene=misL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462656.1;locus_tag=O5D79_001908;product=intestinal colonization autotransporter adhesin MisL;protein_id=HJH9163411.1;transl_table=11 DALFDJ020000008.1 tpg gene 61626 62243 . - . ID=gene-O5D79_001909;Name=O5D79_001909;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001909 DALFDJ020000008.1 Protein Homology CDS 61626 62243 . - 0 ID=cds-HJH9163412.1;Parent=gene-O5D79_001909;Dbxref=NCBI_GP:HJH9163412.1;Name=HJH9163412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462655.1;locus_tag=O5D79_001909;product=helix-turn-helix transcriptional regulator;protein_id=HJH9163412.1;transl_table=11 DALFDJ020000008.1 tpg pseudogene 63000 63110 . - . ID=gene-O5D79_001910;Name=O5D79_001910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001910;pseudo=true DALFDJ020000008.1 Protein Homology CDS 63000 63110 . - 0 ID=cds-O5D79_001910;Parent=gene-O5D79_001910;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671526.1;locus_tag=O5D79_001910;product=transposase;pseudo=true;transl_table=11 DALFDJ020000008.1 tpg pseudogene 63257 63388 . + . ID=gene-O5D79_001911;Name=O5D79_001911;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001911;pseudo=true DALFDJ020000008.1 Protein Homology CDS 63257 63388 . + 0 ID=cds-O5D79_001911;Parent=gene-O5D79_001911;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_354625806.1;locus_tag=O5D79_001911;product=transposase;pseudo=true;transl_table=11 DALFDJ020000008.1 tpg gene 63542 64579 . - . ID=gene-O5D79_001912;Name=rhuM;gbkey=Gene;gene=rhuM;gene_biotype=protein_coding;locus_tag=O5D79_001912 DALFDJ020000008.1 Protein Homology CDS 63542 64579 . - 0 ID=cds-HJH9163413.1;Parent=gene-O5D79_001912;Dbxref=NCBI_GP:HJH9163413.1;Name=HJH9163413.1;gbkey=CDS;gene=rhuM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462654.1;locus_tag=O5D79_001912;product=virulence protein RhuM;protein_id=HJH9163413.1;transl_table=11 DALFDJ020000008.1 tpg pseudogene 64667 65083 . - . ID=gene-O5D79_001913;Name=O5D79_001913;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001913;pseudo=true DALFDJ020000008.1 Protein Homology CDS 64667 65083 . - 0 ID=cds-O5D79_001913;Parent=gene-O5D79_001913;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227719.1;locus_tag=O5D79_001913;product=DUF4942 domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000008.1 tpg pseudogene 65113 66303 . - . ID=gene-O5D79_001914;Name=O5D79_001914;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001914;pseudo=true DALFDJ020000008.1 Protein Homology CDS 65113 66303 . - 0 ID=cds-O5D79_001914;Parent=gene-O5D79_001914;Note=internal stop;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462652.1;locus_tag=O5D79_001914;product=AAA family ATPase;pseudo=true;transl_table=11 DALFDJ020000008.1 tpg gene 66438 66605 . - . ID=gene-O5D79_001915;Name=O5D79_001915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001915 DALFDJ020000008.1 Protein Homology CDS 66438 66605 . - 0 ID=cds-HJH9163414.1;Parent=gene-O5D79_001915;Dbxref=NCBI_GP:HJH9163414.1;Name=HJH9163414.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018465.6;locus_tag=O5D79_001915;product=TA system toxin CbtA family protein;protein_id=HJH9163414.1;transl_table=11 DALFDJ020000008.1 tpg gene 66977 67321 . + . ID=gene-O5D79_001916;Name=O5D79_001916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001916 DALFDJ020000008.1 Protein Homology CDS 66977 67321 . + 0 ID=cds-HJH9163415.1;Parent=gene-O5D79_001916;Dbxref=NCBI_GP:HJH9163415.1;Name=HJH9163415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462651.1;locus_tag=O5D79_001916;product=hypothetical protein;protein_id=HJH9163415.1;transl_table=11 DALFDJ020000008.1 tpg gene 67955 70288 . - . ID=gene-O5D79_001917;Name=O5D79_001917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001917 DALFDJ020000008.1 Protein Homology CDS 67955 70288 . - 0 ID=cds-HJH9163416.1;Parent=gene-O5D79_001917;Dbxref=NCBI_GP:HJH9163416.1;Name=HJH9163416.1;Ontology_term=GO:0003899,GO:0004386,GO:0008270;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA,helicase activity|0004386||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000783702.1;locus_tag=O5D79_001917;product=primase-helicase zinc-binding domain-containing protein;protein_id=HJH9163416.1;transl_table=11 DALFDJ020000008.1 tpg gene 70303 70623 . - . ID=gene-O5D79_001918;Name=O5D79_001918;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001918 DALFDJ020000008.1 Protein Homology CDS 70303 70623 . - 0 ID=cds-HJH9163417.1;Parent=gene-O5D79_001918;Dbxref=NCBI_GP:HJH9163417.1;Name=HJH9163417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224852.1;locus_tag=O5D79_001918;product=DUF5375 domain-containing protein;protein_id=HJH9163417.1;transl_table=11 DALFDJ020000008.1 tpg gene 70620 70847 . - . ID=gene-O5D79_001919;Name=O5D79_001919;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001919 DALFDJ020000008.1 Protein Homology CDS 70620 70847 . - 0 ID=cds-HJH9163418.1;Parent=gene-O5D79_001919;Dbxref=NCBI_GP:HJH9163418.1;Name=HJH9163418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001216597.1;locus_tag=O5D79_001919;product=hypothetical protein;protein_id=HJH9163418.1;transl_table=11 DALFDJ020000008.1 tpg gene 70844 71395 . - . ID=gene-O5D79_001920;Name=O5D79_001920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001920 DALFDJ020000008.1 Protein Homology CDS 70844 71395 . - 0 ID=cds-HJH9163419.1;Parent=gene-O5D79_001920;Dbxref=NCBI_GP:HJH9163419.1;Name=HJH9163419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136111.1;locus_tag=O5D79_001920;product=host cell division inhibitor Icd-like protein;protein_id=HJH9163419.1;transl_table=11 DALFDJ020000008.1 tpg gene 71392 71658 . - . ID=gene-O5D79_001921;Name=O5D79_001921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001921 DALFDJ020000008.1 Protein Homology CDS 71392 71658 . - 0 ID=cds-HJH9163420.1;Parent=gene-O5D79_001921;Dbxref=NCBI_GP:HJH9163420.1;Name=HJH9163420.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224849.1;locus_tag=O5D79_001921;product=helix-turn-helix transcriptional regulator;protein_id=HJH9163420.1;transl_table=11 DALFDJ020000008.1 tpg gene 72198 72935 . + . ID=gene-O5D79_001922;Name=O5D79_001922;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001922 DALFDJ020000008.1 Protein Homology CDS 72198 72935 . + 0 ID=cds-HJH9163421.1;Parent=gene-O5D79_001922;Dbxref=NCBI_GP:HJH9163421.1;Name=HJH9163421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016234818.1;locus_tag=O5D79_001922;product=glycoprotein 3;protein_id=HJH9163421.1;transl_table=11 DALFDJ020000008.1 tpg gene 72932 73177 . + . ID=gene-O5D79_001923;Name=O5D79_001923;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001923 DALFDJ020000008.1 Protein Homology CDS 72932 73177 . + 0 ID=cds-HJH9163422.1;Parent=gene-O5D79_001923;Dbxref=NCBI_GP:HJH9163422.1;Name=HJH9163422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000984207.1;locus_tag=O5D79_001923;product=ogr/Delta-like zinc finger family protein;protein_id=HJH9163422.1;transl_table=11 DALFDJ020000008.1 tpg gene 73194 73760 . + . ID=gene-O5D79_001924;Name=O5D79_001924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001924 DALFDJ020000008.1 Protein Homology CDS 73194 73760 . + 0 ID=cds-HJH9163423.1;Parent=gene-O5D79_001924;Dbxref=NCBI_GP:HJH9163423.1;Name=HJH9163423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210078.1;locus_tag=O5D79_001924;product=phage polarity suppression protein;protein_id=HJH9163423.1;transl_table=11 DALFDJ020000008.1 tpg gene 74154 74786 . - . ID=gene-O5D79_001925;Name=O5D79_001925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001925 DALFDJ020000008.1 Protein Homology CDS 74154 74786 . - 0 ID=cds-HJH9163424.1;Parent=gene-O5D79_001925;Dbxref=NCBI_GP:HJH9163424.1;Name=HJH9163424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001720775.1;locus_tag=O5D79_001925;product=hypothetical protein;protein_id=HJH9163424.1;transl_table=11 DALFDJ020000008.1 tpg gene 74788 75654 . - . ID=gene-O5D79_001926;Name=O5D79_001926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001926 DALFDJ020000008.1 Protein Homology CDS 74788 75654 . - 0 ID=cds-HJH9163425.1;Parent=gene-O5D79_001926;Dbxref=NCBI_GP:HJH9163425.1;Name=HJH9163425.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754434.1;locus_tag=O5D79_001926;product=HAD family hydrolase;protein_id=HJH9163425.1;transl_table=11 DALFDJ020000008.1 tpg gene 75711 76889 . - . ID=gene-O5D79_001927;Name=O5D79_001927;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001927 DALFDJ020000008.1 Protein Homology CDS 75711 76889 . - 0 ID=cds-HJH9163426.1;Parent=gene-O5D79_001927;Dbxref=NCBI_GP:HJH9163426.1;Name=HJH9163426.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001547907.1;locus_tag=O5D79_001927;product=tyrosine-type recombinase/integrase;protein_id=HJH9163426.1;transl_table=11 DALFDJ020000008.1 tpg gene 77051 77145 . - . ID=gene-O5D79_001928;Name=O5D79_001928;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_001928 DALFDJ020000008.1 tRNAscan-SE tRNA 77051 77145 . - . ID=rna-O5D79_001928;Parent=gene-O5D79_001928;anticodon=(pos:complement(77109..77111));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001928;product=tRNA-Sec DALFDJ020000008.1 tRNAscan-SE exon 77051 77145 . - . ID=exon-O5D79_001928-1;Parent=rna-O5D79_001928;anticodon=(pos:complement(77109..77111));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_001928;product=tRNA-Sec DALFDJ020000008.1 tpg pseudogene 77433 78819 . + . ID=gene-O5D79_001929;Name=O5D79_001929;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001929;pseudo=true DALFDJ020000008.1 Protein Homology CDS 77433 78819 . + 0 ID=cds-O5D79_001929;Parent=gene-O5D79_001929;Note=frameshifted;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462650.1;locus_tag=O5D79_001929;product=glycoside-pentoside-hexuronide family transporter;pseudo=true;transl_table=11 DALFDJ020000008.1 tpg gene 78831 81149 . + . ID=gene-O5D79_001930;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=O5D79_001930 DALFDJ020000008.1 Protein Homology CDS 78831 81149 . + 0 ID=cds-HJH9163427.1;Parent=gene-O5D79_001930;Dbxref=NCBI_GP:HJH9163427.1;Name=HJH9163427.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462649.1;locus_tag=O5D79_001930;product=alpha-xylosidase;protein_id=HJH9163427.1;transl_table=11 DALFDJ020000008.1 tpg gene 81252 82961 . - . ID=gene-O5D79_001931;Name=O5D79_001931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001931 DALFDJ020000008.1 Protein Homology CDS 81252 82961 . - 0 ID=cds-HJH9163428.1;Parent=gene-O5D79_001931;Dbxref=NCBI_GP:HJH9163428.1;Name=HJH9163428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=O5D79_001931;product=AsmA family protein;protein_id=HJH9163428.1;transl_table=11 DALFDJ020000008.1 tpg gene 83082 84473 . - . ID=gene-O5D79_001932;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=O5D79_001932 DALFDJ020000008.1 Protein Homology CDS 83082 84473 . - 0 ID=cds-HJH9163429.1;Parent=gene-O5D79_001932;Dbxref=NCBI_GP:HJH9163429.1;Name=HJH9163429.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=O5D79_001932;product=xanthine/proton symporter XanP;protein_id=HJH9163429.1;transl_table=11 DALFDJ020000008.1 tpg gene 84701 85906 . + . ID=gene-O5D79_001933;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=O5D79_001933 DALFDJ020000008.1 Protein Homology CDS 84701 85906 . + 0 ID=cds-HJH9163430.1;Parent=gene-O5D79_001933;Dbxref=NCBI_GP:HJH9163430.1;Name=HJH9163430.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462646.1;locus_tag=O5D79_001933;product=sodium/glutamate symporter;protein_id=HJH9163430.1;transl_table=11 DALFDJ020000008.1 tpg gene 85909 86760 . + . ID=gene-O5D79_001934;Name=O5D79_001934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001934 DALFDJ020000008.1 Protein Homology CDS 85909 86760 . + 0 ID=cds-HJH9163431.1;Parent=gene-O5D79_001934;Dbxref=NCBI_GP:HJH9163431.1;Name=HJH9163431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462645.1;locus_tag=O5D79_001934;product=hypothetical protein;protein_id=HJH9163431.1;transl_table=11 DALFDJ020000008.1 tpg gene 86763 88844 . - . ID=gene-O5D79_001935;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=O5D79_001935 DALFDJ020000008.1 Protein Homology CDS 86763 88844 . - 0 ID=cds-HJH9163432.1;Parent=gene-O5D79_001935;Dbxref=NCBI_GP:HJH9163432.1;Name=HJH9163432.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=O5D79_001935;product=ATP-dependent DNA helicase RecG;protein_id=HJH9163432.1;transl_table=11 DALFDJ020000008.1 tpg gene 88850 89539 . - . ID=gene-O5D79_001936;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=O5D79_001936 DALFDJ020000008.1 Protein Homology CDS 88850 89539 . - 0 ID=cds-HJH9163433.1;Parent=gene-O5D79_001936;Dbxref=NCBI_GP:HJH9163433.1;Name=HJH9163433.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=O5D79_001936;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=HJH9163433.1;transl_table=11 DALFDJ020000008.1 tpg gene 89544 91655 . - . ID=gene-O5D79_001937;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=O5D79_001937 DALFDJ020000008.1 Protein Homology CDS 89544 91655 . - 0 ID=cds-HJH9163434.1;Parent=gene-O5D79_001937;Dbxref=NCBI_GP:HJH9163434.1;Name=HJH9163434.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=O5D79_001937;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=HJH9163434.1;transl_table=11 DALFDJ020000008.1 tpg gene 91674 91949 . - . ID=gene-O5D79_001938;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=O5D79_001938 DALFDJ020000008.1 Protein Homology CDS 91674 91949 . - 0 ID=cds-HJH9163435.1;Parent=gene-O5D79_001938;Dbxref=NCBI_GP:HJH9163435.1;Name=HJH9163435.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=O5D79_001938;product=DNA-directed RNA polymerase subunit omega;protein_id=HJH9163435.1;transl_table=11 DALFDJ020000008.1 tpg gene 92004 92627 . - . ID=gene-O5D79_001939;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=O5D79_001939 DALFDJ020000008.1 Protein Homology CDS 92004 92627 . - 0 ID=cds-HJH9163436.1;Parent=gene-O5D79_001939;Dbxref=NCBI_GP:HJH9163436.1;Name=HJH9163436.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=O5D79_001939;product=guanylate kinase;protein_id=HJH9163436.1;transl_table=11 DALFDJ020000008.1 tpg gene 92884 94569 . + . ID=gene-O5D79_001940;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=O5D79_001940 DALFDJ020000008.1 Protein Homology CDS 92884 94569 . + 0 ID=cds-HJH9163437.1;Parent=gene-O5D79_001940;Dbxref=NCBI_GP:HJH9163437.1;Name=HJH9163437.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=O5D79_001940;product=NAD-dependent DNA ligase LigB;protein_id=HJH9163437.1;transl_table=11 DALFDJ020000008.1 tpg gene 94566 95183 . - . ID=gene-O5D79_001941;Name=O5D79_001941;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001941 DALFDJ020000008.1 Protein Homology CDS 94566 95183 . - 0 ID=cds-HJH9163438.1;Parent=gene-O5D79_001941;Dbxref=NCBI_GP:HJH9163438.1;Name=HJH9163438.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=O5D79_001941;product=trimeric intracellular cation channel family protein;protein_id=HJH9163438.1;transl_table=11 DALFDJ020000008.1 tpg gene 95431 96315 . - . ID=gene-O5D79_001942;Name=O5D79_001942;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001942 DALFDJ020000008.1 Protein Homology CDS 95431 96315 . - 0 ID=cds-HJH9163439.1;Parent=gene-O5D79_001942;Dbxref=NCBI_GP:HJH9163439.1;Name=HJH9163439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001083230.1;locus_tag=O5D79_001942;product=HARLDQ motif MBL-fold protein;protein_id=HJH9163439.1;transl_table=11 DALFDJ020000008.1 tpg gene 96389 97291 . + . ID=gene-O5D79_001943;Name=O5D79_001943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001943 DALFDJ020000008.1 Protein Homology CDS 96389 97291 . + 0 ID=cds-HJH9163440.1;Parent=gene-O5D79_001943;Dbxref=NCBI_GP:HJH9163440.1;Name=HJH9163440.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=O5D79_001943;product=LysR family transcriptional regulator;protein_id=HJH9163440.1;transl_table=11 DALFDJ020000008.1 tpg gene 97341 98204 . - . ID=gene-O5D79_001944;Name=O5D79_001944;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001944 DALFDJ020000008.1 Protein Homology CDS 97341 98204 . - 0 ID=cds-HJH9163441.1;Parent=gene-O5D79_001944;Dbxref=NCBI_GP:HJH9163441.1;Name=HJH9163441.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=O5D79_001944;product=YicC/YloC family endoribonuclease;protein_id=HJH9163441.1;transl_table=11 DALFDJ020000008.1 tpg gene 98330 99046 . + . ID=gene-O5D79_001945;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=O5D79_001945 DALFDJ020000008.1 Protein Homology CDS 98330 99046 . + 0 ID=cds-HJH9163442.1;Parent=gene-O5D79_001945;Dbxref=NCBI_GP:HJH9163442.1;Name=HJH9163442.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=O5D79_001945;product=ribonuclease PH;protein_id=HJH9163442.1;transl_table=11 DALFDJ020000008.1 tpg gene 99125 99766 . + . ID=gene-O5D79_001946;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=O5D79_001946 DALFDJ020000008.1 Protein Homology CDS 99125 99766 . + 0 ID=cds-HJH9163443.1;Parent=gene-O5D79_001946;Dbxref=NCBI_GP:HJH9163443.1;Name=HJH9163443.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=O5D79_001946;product=orotate phosphoribosyltransferase;protein_id=HJH9163443.1;transl_table=11 DALFDJ020000008.1 tpg gene 99844 100440 . - . ID=gene-O5D79_001947;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=O5D79_001947 DALFDJ020000008.1 Protein Homology CDS 99844 100440 . - 0 ID=cds-HJH9163444.1;Parent=gene-O5D79_001947;Dbxref=NCBI_GP:HJH9163444.1;Name=HJH9163444.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=O5D79_001947;product=nucleoid occlusion factor SlmA;protein_id=HJH9163444.1;transl_table=11 DALFDJ020000008.1 tpg gene 100548 101006 . - . ID=gene-O5D79_001948;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=O5D79_001948 DALFDJ020000008.1 Protein Homology CDS 100548 101006 . - 0 ID=cds-HJH9163445.1;Parent=gene-O5D79_001948;Dbxref=NCBI_GP:HJH9163445.1;Name=HJH9163445.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=O5D79_001948;product=dUTP diphosphatase;protein_id=HJH9163445.1;transl_table=11 DALFDJ020000008.1 tpg gene 100984 102204 . - . ID=gene-O5D79_001949;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=O5D79_001949 DALFDJ020000008.1 Protein Homology CDS 100984 102204 . - 0 ID=cds-HJH9163446.1;Parent=gene-O5D79_001949;Dbxref=NCBI_GP:HJH9163446.1;Name=HJH9163446.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=O5D79_001949;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=HJH9163446.1;transl_table=11 DALFDJ020000008.1 tpg gene 102380 103045 . + . ID=gene-O5D79_001950;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=O5D79_001950 DALFDJ020000008.1 Protein Homology CDS 102380 103045 . + 0 ID=cds-HJH9163447.1;Parent=gene-O5D79_001950;Dbxref=NCBI_GP:HJH9163447.1;Name=HJH9163447.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462629.1;locus_tag=O5D79_001950;product=RadC family protein;protein_id=HJH9163447.1;transl_table=11 DALFDJ020000008.1 tpg gene 103263 103499 . + . ID=gene-O5D79_001951;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=O5D79_001951 DALFDJ020000008.1 Protein Homology CDS 103263 103499 . + 0 ID=cds-HJH9163448.1;Parent=gene-O5D79_001951;Dbxref=NCBI_GP:HJH9163448.1;Name=HJH9163448.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=O5D79_001951;product=50S ribosomal protein L28;protein_id=HJH9163448.1;transl_table=11 DALFDJ020000008.1 tpg gene 103520 103687 . + . ID=gene-O5D79_001952;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=O5D79_001952 DALFDJ020000008.1 Protein Homology CDS 103520 103687 . + 0 ID=cds-HJH9163449.1;Parent=gene-O5D79_001952;Dbxref=NCBI_GP:HJH9163449.1;Name=HJH9163449.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=O5D79_001952;product=50S ribosomal protein L33;protein_id=HJH9163449.1;transl_table=11 DALFDJ020000008.1 tpg gene 103785 104594 . + . ID=gene-O5D79_001953;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=O5D79_001953 DALFDJ020000008.1 Protein Homology CDS 103785 104594 . + 0 ID=cds-HJH9163450.1;Parent=gene-O5D79_001953;Dbxref=NCBI_GP:HJH9163450.1;Name=HJH9163450.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462626.1;locus_tag=O5D79_001953;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=HJH9163450.1;transl_table=11 DALFDJ020000008.1 tpg gene 104622 105101 . - . ID=gene-O5D79_001954;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=O5D79_001954 DALFDJ020000008.1 Protein Homology CDS 104622 105101 . - 0 ID=cds-HJH9163451.1;Parent=gene-O5D79_001954;Dbxref=NCBI_GP:HJH9163451.1;Name=HJH9163451.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462625.1;locus_tag=O5D79_001954;product=pantetheine-phosphate adenylyltransferase;protein_id=HJH9163451.1;transl_table=11 DALFDJ020000008.1 tpg gene 105110 106387 . - . ID=gene-O5D79_001955;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=O5D79_001955 DALFDJ020000008.1 Protein Homology CDS 105110 106387 . - 0 ID=cds-HJH9163452.1;Parent=gene-O5D79_001955;Dbxref=NCBI_GP:HJH9163452.1;Name=HJH9163452.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462624.1;locus_tag=O5D79_001955;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=HJH9163452.1;transl_table=11 DALFDJ020000008.1 tpg gene 106796 107866 . + . ID=gene-O5D79_001956;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=O5D79_001956 DALFDJ020000008.1 Protein Homology CDS 106796 107866 . + 0 ID=cds-HJH9163453.1;Parent=gene-O5D79_001956;Dbxref=NCBI_GP:HJH9163453.1;Name=HJH9163453.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521713.1;locus_tag=O5D79_001956;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=HJH9163453.1;transl_table=11 DALFDJ020000008.1 tpg gene 107863 108987 . + . ID=gene-O5D79_001957;Name=O5D79_001957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001957 DALFDJ020000008.1 Protein Homology CDS 107863 108987 . + 0 ID=cds-HJH9163454.1;Parent=gene-O5D79_001957;Dbxref=NCBI_GP:HJH9163454.1;Name=HJH9163454.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462622.1;locus_tag=O5D79_001957;product=glycosyltransferase family 4 protein;protein_id=HJH9163454.1;transl_table=11 DALFDJ020000008.1 tpg gene 108980 109777 . + . ID=gene-O5D79_001958;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=O5D79_001958 DALFDJ020000008.1 Protein Homology CDS 108980 109777 . + 0 ID=cds-HJH9163455.1;Parent=gene-O5D79_001958;Dbxref=NCBI_GP:HJH9163455.1;Name=HJH9163455.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462621.1;locus_tag=O5D79_001958;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=HJH9163455.1;transl_table=11 DALFDJ020000008.1 tpg gene 109883 110755 . + . ID=gene-O5D79_001959;Name=O5D79_001959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001959 DALFDJ020000008.1 Protein Homology CDS 109883 110755 . + 0 ID=cds-HJH9163456.1;Parent=gene-O5D79_001959;Dbxref=NCBI_GP:HJH9163456.1;Name=HJH9163456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000280506.1;locus_tag=O5D79_001959;product=glycosyltransferase family 52;protein_id=HJH9163456.1;transl_table=11 DALFDJ020000008.1 tpg gene 110841 111920 . + . ID=gene-O5D79_001960;Name=waaB;gbkey=Gene;gene=waaB;gene_biotype=protein_coding;gene_synonym=rfaB;locus_tag=O5D79_001960 DALFDJ020000008.1 Protein Homology CDS 110841 111920 . + 0 ID=cds-HJH9163457.1;Parent=gene-O5D79_001960;Dbxref=NCBI_GP:HJH9163457.1;Name=HJH9163457.1;gbkey=CDS;gene=waaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462619.1;locus_tag=O5D79_001960;product=lipopolysaccharide 1%2C6-galactosyltransferase;protein_id=HJH9163457.1;transl_table=11 DALFDJ020000008.1 tpg gene 111926 112939 . + . ID=gene-O5D79_001961;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=O5D79_001961 DALFDJ020000008.1 Protein Homology CDS 111926 112939 . + 0 ID=cds-HJH9163458.1;Parent=gene-O5D79_001961;Dbxref=NCBI_GP:HJH9163458.1;Name=HJH9163458.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462618.1;locus_tag=O5D79_001961;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=HJH9163458.1;transl_table=11 DALFDJ020000008.1 tpg gene 112957 113967 . + . ID=gene-O5D79_001962;Name=rfaJ;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=O5D79_001962 DALFDJ020000008.1 Protein Homology CDS 112957 113967 . + 0 ID=cds-HJH9163459.1;Parent=gene-O5D79_001962;Dbxref=NCBI_GP:HJH9163459.1;Name=HJH9163459.1;gbkey=CDS;gene=rfaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462617.1;locus_tag=O5D79_001962;product=lipopolysaccharide 1%2C2-glucosyltransferase RfaJ;protein_id=HJH9163459.1;transl_table=11 DALFDJ020000008.1 tpg gene 113990 114688 . + . ID=gene-O5D79_001963;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=O5D79_001963 DALFDJ020000008.1 Protein Homology CDS 113990 114688 . + 0 ID=cds-HJH9163460.1;Parent=gene-O5D79_001963;Dbxref=NCBI_GP:HJH9163460.1;Name=HJH9163460.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462616.1;locus_tag=O5D79_001963;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=HJH9163460.1;transl_table=11 DALFDJ020000008.1 tpg gene 114838 115647 . + . ID=gene-O5D79_001964;Name=waaZ;gbkey=Gene;gene=waaZ;gene_biotype=protein_coding;locus_tag=O5D79_001964 DALFDJ020000008.1 Protein Homology CDS 114838 115647 . + 0 ID=cds-HJH9163461.1;Parent=gene-O5D79_001964;Dbxref=NCBI_GP:HJH9163461.1;Name=HJH9163461.1;gbkey=CDS;gene=waaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462615.1;locus_tag=O5D79_001964;product=3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ;protein_id=HJH9163461.1;transl_table=11 DALFDJ020000008.1 tpg gene 115747 116892 . + . ID=gene-O5D79_001965;Name=O5D79_001965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001965 DALFDJ020000008.1 Protein Homology CDS 115747 116892 . + 0 ID=cds-HJH9163462.1;Parent=gene-O5D79_001965;Dbxref=NCBI_GP:HJH9163462.1;Name=HJH9163462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462614.1;locus_tag=O5D79_001965;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=HJH9163462.1;transl_table=11 DALFDJ020000008.1 tpg gene 116949 118163 . - . ID=gene-O5D79_001966;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=O5D79_001966 DALFDJ020000008.1 Protein Homology CDS 116949 118163 . - 0 ID=cds-HJH9163463.1;Parent=gene-O5D79_001966;Dbxref=NCBI_GP:HJH9163463.1;Name=HJH9163463.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462613.1;locus_tag=O5D79_001966;product=O-antigen ligase RfaL;protein_id=HJH9163463.1;transl_table=11 DALFDJ020000008.1 tpg gene 118203 119156 . - . ID=gene-O5D79_001967;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=O5D79_001967 DALFDJ020000008.1 Protein Homology CDS 118203 119156 . - 0 ID=cds-HJH9163464.1;Parent=gene-O5D79_001967;Dbxref=NCBI_GP:HJH9163464.1;Name=HJH9163464.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462612.1;locus_tag=O5D79_001967;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=HJH9163464.1;transl_table=11 DALFDJ020000008.1 tpg gene 119156 120202 . - . ID=gene-O5D79_001968;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=O5D79_001968 DALFDJ020000008.1 Protein Homology CDS 119156 120202 . - 0 ID=cds-HJH9163465.1;Parent=gene-O5D79_001968;Dbxref=NCBI_GP:HJH9163465.1;Name=HJH9163465.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462611.1;locus_tag=O5D79_001968;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=HJH9163465.1;transl_table=11 DALFDJ020000008.1 tpg gene 120205 121137 . - . ID=gene-O5D79_001969;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=O5D79_001969 DALFDJ020000008.1 Protein Homology CDS 120205 121137 . - 0 ID=cds-HJH9163466.1;Parent=gene-O5D79_001969;Dbxref=NCBI_GP:HJH9163466.1;Name=HJH9163466.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=O5D79_001969;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=HJH9163466.1;transl_table=11 DALFDJ020000008.1 tpg gene 121340 122536 . + . ID=gene-O5D79_001970;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=O5D79_001970 DALFDJ020000008.1 Protein Homology CDS 121340 122536 . + 0 ID=cds-HJH9163467.1;Parent=gene-O5D79_001970;Dbxref=NCBI_GP:HJH9163467.1;Name=HJH9163467.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=O5D79_001970;product=glycine C-acetyltransferase;protein_id=HJH9163467.1;transl_table=11 DALFDJ020000008.1 tpg gene 122546 123571 . + . ID=gene-O5D79_001971;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=O5D79_001971 DALFDJ020000008.1 Protein Homology CDS 122546 123571 . + 0 ID=cds-HJH9163468.1;Parent=gene-O5D79_001971;Dbxref=NCBI_GP:HJH9163468.1;Name=HJH9163468.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=O5D79_001971;product=L-threonine 3-dehydrogenase;protein_id=HJH9163468.1;transl_table=11 DALFDJ020000008.1 tpg pseudogene 123865 124888 . + . ID=gene-O5D79_001972;Name=O5D79_001972;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_001972;pseudo=true DALFDJ020000008.1 Protein Homology CDS 123865 124888 . + 0 ID=cds-O5D79_001972;Parent=gene-O5D79_001972;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462607.1;locus_tag=O5D79_001972;product=glycosyltransferase;pseudo=true;transl_table=11 DALFDJ020000008.1 tpg gene 124875 125837 . - . ID=gene-O5D79_001973;Name=O5D79_001973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001973 DALFDJ020000008.1 Protein Homology CDS 124875 125837 . - 0 ID=cds-HJH9163469.1;Parent=gene-O5D79_001973;Dbxref=NCBI_GP:HJH9163469.1;Name=HJH9163469.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462606.1;locus_tag=O5D79_001973;product=divergent polysaccharide deacetylase family protein;protein_id=HJH9163469.1;transl_table=11 DALFDJ020000008.1 tpg gene 125841 127100 . - . ID=gene-O5D79_001974;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=O5D79_001974 DALFDJ020000008.1 Protein Homology CDS 125841 127100 . - 0 ID=cds-HJH9163470.1;Parent=gene-O5D79_001974;Dbxref=NCBI_GP:HJH9163470.1;Name=HJH9163470.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=O5D79_001974;product=murein hydrolase activator EnvC;protein_id=HJH9163470.1;transl_table=11 DALFDJ020000008.1 tpg gene 127134 128678 . - . ID=gene-O5D79_001975;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=O5D79_001975 DALFDJ020000008.1 Protein Homology CDS 127134 128678 . - 0 ID=cds-HJH9163471.1;Parent=gene-O5D79_001975;Dbxref=NCBI_GP:HJH9163471.1;Name=HJH9163471.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462604.1;locus_tag=O5D79_001975;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=HJH9163471.1;transl_table=11 DALFDJ020000008.1 tpg gene 128926 129357 . + . ID=gene-O5D79_001976;Name=O5D79_001976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001976 DALFDJ020000008.1 Protein Homology CDS 128926 129357 . + 0 ID=cds-HJH9163472.1;Parent=gene-O5D79_001976;Dbxref=NCBI_GP:HJH9163472.1;Name=HJH9163472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462603.1;locus_tag=O5D79_001976;product=rhodanese-like domain-containing protein;protein_id=HJH9163472.1;transl_table=11 DALFDJ020000008.1 tpg gene 129443 129694 . + . ID=gene-O5D79_001977;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=O5D79_001977 DALFDJ020000008.1 Protein Homology CDS 129443 129694 . + 0 ID=cds-HJH9163473.1;Parent=gene-O5D79_001977;Dbxref=NCBI_GP:HJH9163473.1;Name=HJH9163473.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462602.1;locus_tag=O5D79_001977;product=glutaredoxin 3;protein_id=HJH9163473.1;transl_table=11 DALFDJ020000008.1 tpg gene 129738 130205 . + . ID=gene-O5D79_001978;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=O5D79_001978 DALFDJ020000008.1 Protein Homology CDS 129738 130205 . + 0 ID=cds-HJH9163474.1;Parent=gene-O5D79_001978;Dbxref=NCBI_GP:HJH9163474.1;Name=HJH9163474.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=O5D79_001978;product=protein-export chaperone SecB;protein_id=HJH9163474.1;transl_table=11 DALFDJ020000008.1 tpg gene 130205 131224 . + . ID=gene-O5D79_001979;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=O5D79_001979 DALFDJ020000008.1 Protein Homology CDS 130205 131224 . + 0 ID=cds-HJH9163475.1;Parent=gene-O5D79_001979;Dbxref=NCBI_GP:HJH9163475.1;Name=HJH9163475.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462600.1;locus_tag=O5D79_001979;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=HJH9163475.1;transl_table=11 DALFDJ020000008.1 tpg gene 131302 132123 . + . ID=gene-O5D79_001980;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=O5D79_001980 DALFDJ020000008.1 Protein Homology CDS 131302 132123 . + 0 ID=cds-HJH9163476.1;Parent=gene-O5D79_001980;Dbxref=NCBI_GP:HJH9163476.1;Name=HJH9163476.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=O5D79_001980;product=serine O-acetyltransferase;protein_id=HJH9163476.1;transl_table=11 DALFDJ020000008.1 tpg gene 132206 133516 . - . ID=gene-O5D79_001981;Name=O5D79_001981;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001981 DALFDJ020000008.1 Protein Homology CDS 132206 133516 . - 0 ID=cds-HJH9163477.1;Parent=gene-O5D79_001981;Dbxref=NCBI_GP:HJH9163477.1;Name=HJH9163477.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462598.1;locus_tag=O5D79_001981;product=MFS transporter;protein_id=HJH9163477.1;transl_table=11 DALFDJ020000008.1 tpg gene 133590 134786 . - . ID=gene-O5D79_001982;Name=O5D79_001982;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001982 DALFDJ020000008.1 Protein Homology CDS 133590 134786 . - 0 ID=cds-HJH9163478.1;Parent=gene-O5D79_001982;Dbxref=NCBI_GP:HJH9163478.1;Name=HJH9163478.1;Ontology_term=GO:0046392,GO:1903663,GO:0008867,GO:1990594;gbkey=CDS;go_function=galactarate dehydratase activity|0008867||IEA,L-altrarate dehydratase activity|1990594||IEA;go_process=galactarate catabolic process|0046392||IEA,L-altrarate catabolic process|1903663||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462597.1;locus_tag=O5D79_001982;product=L-talarate/galactarate dehydratase;protein_id=HJH9163478.1;transl_table=11 DALFDJ020000008.1 tpg gene 135105 136109 . + . ID=gene-O5D79_001983;Name=O5D79_001983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001983 DALFDJ020000008.1 Protein Homology CDS 135105 136109 . + 0 ID=cds-HJH9163479.1;Parent=gene-O5D79_001983;Dbxref=NCBI_GP:HJH9163479.1;Name=HJH9163479.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462596.1;locus_tag=O5D79_001983;product=LacI family DNA-binding transcriptional regulator;protein_id=HJH9163479.1;transl_table=11 DALFDJ020000008.1 tpg gene 136177 136650 . - . ID=gene-O5D79_001984;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=O5D79_001984 DALFDJ020000008.1 Protein Homology CDS 136177 136650 . - 0 ID=cds-HJH9163480.1;Parent=gene-O5D79_001984;Dbxref=NCBI_GP:HJH9163480.1;Name=HJH9163480.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=O5D79_001984;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=HJH9163480.1;transl_table=11 DALFDJ020000008.1 tpg gene 136715 137905 . - . ID=gene-O5D79_001985;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=O5D79_001985 DALFDJ020000008.1 Protein Homology CDS 136715 137905 . - 0 ID=cds-HJH9163481.1;Parent=gene-O5D79_001985;Dbxref=NCBI_GP:HJH9163481.1;Name=HJH9163481.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=O5D79_001985;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=HJH9163481.1;transl_table=11 DALFDJ020000008.1 tpg gene 137902 138678 . - . ID=gene-O5D79_001986;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=O5D79_001986 DALFDJ020000008.1 Protein Homology CDS 137902 138678 . - 0 ID=cds-HJH9163482.1;Parent=gene-O5D79_001986;Dbxref=NCBI_GP:HJH9163482.1;Name=HJH9163482.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462593.1;locus_tag=O5D79_001986;product=transcriptional regulator LldR;protein_id=HJH9163482.1;transl_table=11 DALFDJ020000008.1 tpg gene 138675 140330 . - . ID=gene-O5D79_001987;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=O5D79_001987 DALFDJ020000008.1 Protein Homology CDS 138675 140330 . - 0 ID=cds-HJH9163483.1;Parent=gene-O5D79_001987;Dbxref=NCBI_GP:HJH9163483.1;Name=HJH9163483.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=O5D79_001987;product=L-lactate permease;protein_id=HJH9163483.1;transl_table=11 DALFDJ020000008.1 tpg gene 140604 140966 . - . ID=gene-O5D79_001988;Name=O5D79_001988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001988 DALFDJ020000008.1 Protein Homology CDS 140604 140966 . - 0 ID=cds-HJH9163484.1;Parent=gene-O5D79_001988;Dbxref=NCBI_GP:HJH9163484.1;Name=HJH9163484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462589.1;locus_tag=O5D79_001988;product=YibL family ribosome-associated protein;protein_id=HJH9163484.1;transl_table=11 DALFDJ020000008.1 tpg gene 141257 141466 . + . ID=gene-O5D79_001989;Name=O5D79_001989;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001989 DALFDJ020000008.1 Protein Homology CDS 141257 141466 . + 0 ID=cds-HJH9163485.1;Parent=gene-O5D79_001989;Dbxref=NCBI_GP:HJH9163485.1;Name=HJH9163485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462588.1;locus_tag=O5D79_001989;product=hypothetical protein;protein_id=HJH9163485.1;transl_table=11 DALFDJ020000008.1 tpg gene 141476 142066 . - . ID=gene-O5D79_001990;Name=O5D79_001990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001990 DALFDJ020000008.1 Protein Homology CDS 141476 142066 . - 0 ID=cds-HJH9163486.1;Parent=gene-O5D79_001990;Dbxref=NCBI_GP:HJH9163486.1;Name=HJH9163486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462587.1;locus_tag=O5D79_001990;product=MltR family transcriptional regulator;protein_id=HJH9163486.1;transl_table=11 DALFDJ020000008.1 tpg gene 142063 143211 . - . ID=gene-O5D79_001991;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=O5D79_001991 DALFDJ020000008.1 Protein Homology CDS 142063 143211 . - 0 ID=cds-HJH9163487.1;Parent=gene-O5D79_001991;Dbxref=NCBI_GP:HJH9163487.1;Name=HJH9163487.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=O5D79_001991;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=HJH9163487.1;transl_table=11 DALFDJ020000008.1 tpg gene 143442 145358 . - . ID=gene-O5D79_001992;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=O5D79_001992 DALFDJ020000008.1 Protein Homology CDS 143442 145358 . - 0 ID=cds-HJH9163488.1;Parent=gene-O5D79_001992;Dbxref=NCBI_GP:HJH9163488.1;Name=HJH9163488.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462585.1;locus_tag=O5D79_001992;product=PTS mannitol transporter subunit IICBA;protein_id=HJH9163488.1;transl_table=11 DALFDJ020000008.1 tpg gene 145892 146254 . + . ID=gene-O5D79_001993;Name=O5D79_001993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001993 DALFDJ020000008.1 Protein Homology CDS 145892 146254 . + 0 ID=cds-HJH9163489.1;Parent=gene-O5D79_001993;Dbxref=NCBI_GP:HJH9163489.1;Name=HJH9163489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418055.1;locus_tag=O5D79_001993;product=DUF3302 domain-containing protein;protein_id=HJH9163489.1;transl_table=11 DALFDJ020000008.1 tpg gene 146257 147393 . + . ID=gene-O5D79_001994;Name=O5D79_001994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001994 DALFDJ020000008.1 Protein Homology CDS 146257 147393 . + 0 ID=cds-HJH9163490.1;Parent=gene-O5D79_001994;Dbxref=NCBI_GP:HJH9163490.1;Name=HJH9163490.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312500.1;locus_tag=O5D79_001994;product=HlyD family secretion protein;protein_id=HJH9163490.1;transl_table=11 DALFDJ020000008.1 tpg gene 147491 148099 . + . ID=gene-O5D79_001995;Name=O5D79_001995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001995 DALFDJ020000008.1 Protein Homology CDS 147491 148099 . + 0 ID=cds-HJH9163491.1;Parent=gene-O5D79_001995;Dbxref=NCBI_GP:HJH9163491.1;Name=HJH9163491.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462584.1;locus_tag=O5D79_001995;product=glutathione S-transferase;protein_id=HJH9163491.1;transl_table=11 DALFDJ020000008.1 tpg gene 148198 149589 . + . ID=gene-O5D79_001996;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=O5D79_001996 DALFDJ020000008.1 Protein Homology CDS 148198 149589 . + 0 ID=cds-HJH9163492.1;Parent=gene-O5D79_001996;Dbxref=NCBI_GP:HJH9163492.1;Name=HJH9163492.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462583.1;locus_tag=O5D79_001996;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=HJH9163492.1;transl_table=11 DALFDJ020000008.1 tpg gene 149586 151436 . + . ID=gene-O5D79_001997;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=O5D79_001997 DALFDJ020000008.1 Protein Homology CDS 149586 151436 . + 0 ID=cds-HJH9163493.1;Parent=gene-O5D79_001997;Dbxref=NCBI_GP:HJH9163493.1;Name=HJH9163493.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462582.1;locus_tag=O5D79_001997;product=selenocysteine-specific translation elongation factor;protein_id=HJH9163493.1;transl_table=11 DALFDJ020000008.1 tpg gene 151684 152565 . - . ID=gene-O5D79_001998;Name=O5D79_001998;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_001998 DALFDJ020000008.1 Protein Homology CDS 151684 152565 . - 0 ID=cds-HJH9163494.1;Parent=gene-O5D79_001998;Dbxref=NCBI_GP:HJH9163494.1;Name=HJH9163494.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002954677.1;locus_tag=O5D79_001998;product=ROK family protein;protein_id=HJH9163494.1;transl_table=11 DALFDJ020000008.1 tpg gene 152734 154272 . + . ID=gene-O5D79_001999;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=O5D79_001999 DALFDJ020000008.1 Protein Homology CDS 152734 154272 . + 0 ID=cds-HJH9163495.1;Parent=gene-O5D79_001999;Dbxref=NCBI_GP:HJH9163495.1;Name=HJH9163495.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462580.1;locus_tag=O5D79_001999;product=aldehyde dehydrogenase AldB;protein_id=HJH9163495.1;transl_table=11 DALFDJ020000008.1 tpg gene 154558 156513 . - . ID=gene-O5D79_002000;Name=O5D79_002000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002000 DALFDJ020000008.1 Protein Homology CDS 154558 156513 . - 0 ID=cds-HJH9163496.1;Parent=gene-O5D79_002000;Dbxref=NCBI_GP:HJH9163496.1;Name=HJH9163496.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462579.1;locus_tag=O5D79_002000;product=glycoside hydrolase family 127 protein;protein_id=HJH9163496.1;transl_table=11 DALFDJ020000008.1 tpg gene 156777 157592 . + . ID=gene-O5D79_002001;Name=O5D79_002001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002001 DALFDJ020000008.1 Protein Homology CDS 156777 157592 . + 0 ID=cds-HJH9163497.1;Parent=gene-O5D79_002001;Dbxref=NCBI_GP:HJH9163497.1;Name=HJH9163497.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462578.1;locus_tag=O5D79_002001;product=helix-turn-helix domain-containing protein;protein_id=HJH9163497.1;transl_table=11 DALFDJ020000008.1 tpg gene 157753 158448 . - . ID=gene-O5D79_002002;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=O5D79_002002 DALFDJ020000008.1 Protein Homology CDS 157753 158448 . - 0 ID=cds-HJH9163498.1;Parent=gene-O5D79_002002;Dbxref=NCBI_GP:HJH9163498.1;Name=HJH9163498.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462577.1;locus_tag=O5D79_002002;product=L-ribulose-5-phosphate 4-epimerase;protein_id=HJH9163498.1;transl_table=11 DALFDJ020000008.1 tpg gene 158442 159302 . - . ID=gene-O5D79_002003;Name=O5D79_002003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002003 DALFDJ020000008.1 Protein Homology CDS 158442 159302 . - 0 ID=cds-HJH9163499.1;Parent=gene-O5D79_002003;Dbxref=NCBI_GP:HJH9163499.1;Name=HJH9163499.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=O5D79_002003;product=L-ribulose-5-phosphate 3-epimerase;protein_id=HJH9163499.1;transl_table=11 DALFDJ020000008.1 tpg gene 159295 159957 . - . ID=gene-O5D79_002004;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=O5D79_002004 DALFDJ020000008.1 Protein Homology CDS 159295 159957 . - 0 ID=cds-HJH9163500.1;Parent=gene-O5D79_002004;Dbxref=NCBI_GP:HJH9163500.1;Name=HJH9163500.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462575.1;locus_tag=O5D79_002004;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=HJH9163500.1;transl_table=11 DALFDJ020000008.1 tpg gene 159954 161450 . - . ID=gene-O5D79_002005;Name=O5D79_002005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002005 DALFDJ020000008.1 Protein Homology CDS 159954 161450 . - 0 ID=cds-HJH9163501.1;Parent=gene-O5D79_002005;Dbxref=NCBI_GP:HJH9163501.1;Name=HJH9163501.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462574.1;locus_tag=O5D79_002005;product=FGGY-family carbohydrate kinase;protein_id=HJH9163501.1;transl_table=11 DALFDJ020000008.1 tpg gene 161454 162440 . - . ID=gene-O5D79_002006;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;locus_tag=O5D79_002006 DALFDJ020000008.1 Protein Homology CDS 161454 162440 . - 0 ID=cds-HJH9163502.1;Parent=gene-O5D79_002006;Dbxref=NCBI_GP:HJH9163502.1;Name=HJH9163502.1;gbkey=CDS;gene=yiaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462573.1;locus_tag=O5D79_002006;product=2%2C3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO;protein_id=HJH9163502.1;transl_table=11 DALFDJ020000008.1 tpg gene 162452 163729 . - . ID=gene-O5D79_002007;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=O5D79_002007 DALFDJ020000008.1 Protein Homology CDS 162452 163729 . - 0 ID=cds-HJH9163503.1;Parent=gene-O5D79_002007;Dbxref=NCBI_GP:HJH9163503.1;Name=HJH9163503.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaN;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462572.1;locus_tag=O5D79_002007;product=2%2C3-diketo-L-gulonate TRAP transporter large permease YiaN;protein_id=HJH9163503.1;transl_table=11 DALFDJ020000008.1 tpg gene 163732 164205 . - . ID=gene-O5D79_002008;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=O5D79_002008 DALFDJ020000008.1 Protein Homology CDS 163732 164205 . - 0 ID=cds-HJH9163504.1;Parent=gene-O5D79_002008;Dbxref=NCBI_GP:HJH9163504.1;Name=HJH9163504.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaM;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462571.1;locus_tag=O5D79_002008;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=HJH9163504.1;transl_table=11 DALFDJ020000008.1 tpg gene 164344 165276 . - . ID=gene-O5D79_002009;Name=O5D79_002009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002009 DALFDJ020000008.1 Protein Homology CDS 164344 165276 . - 0 ID=cds-HJH9163505.1;Parent=gene-O5D79_002009;Dbxref=NCBI_GP:HJH9163505.1;Name=HJH9163505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000794982.1;locus_tag=O5D79_002009;product=DUF4862 family protein;protein_id=HJH9163505.1;transl_table=11 DALFDJ020000008.1 tpg gene 165300 165764 . - . ID=gene-O5D79_002010;Name=O5D79_002010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002010 DALFDJ020000008.1 Protein Homology CDS 165300 165764 . - 0 ID=cds-HJH9163506.1;Parent=gene-O5D79_002010;Dbxref=NCBI_GP:HJH9163506.1;Name=HJH9163506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462569.1;locus_tag=O5D79_002010;product=YhcH/YjgK/YiaL family protein;protein_id=HJH9163506.1;transl_table=11 DALFDJ020000008.1 tpg gene 165776 166774 . - . ID=gene-O5D79_002011;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=O5D79_002011 DALFDJ020000008.1 Protein Homology CDS 165776 166774 . - 0 ID=cds-HJH9163507.1;Parent=gene-O5D79_002011;Dbxref=NCBI_GP:HJH9163507.1;Name=HJH9163507.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462568.1;locus_tag=O5D79_002011;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=HJH9163507.1;transl_table=11 DALFDJ020000008.1 tpg gene 167004 167804 . + . ID=gene-O5D79_002012;Name=O5D79_002012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002012 DALFDJ020000008.1 Protein Homology CDS 167004 167804 . + 0 ID=cds-HJH9163508.1;Parent=gene-O5D79_002012;Dbxref=NCBI_GP:HJH9163508.1;Name=HJH9163508.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462567.1;locus_tag=O5D79_002012;product=IclR family transcriptional regulator;protein_id=HJH9163508.1;transl_table=11 DALFDJ020000008.1 tpg gene 167921 168394 . + . ID=gene-O5D79_002013;Name=O5D79_002013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002013 DALFDJ020000008.1 Protein Homology CDS 167921 168394 . + 0 ID=cds-HJH9163509.1;Parent=gene-O5D79_002013;Dbxref=NCBI_GP:HJH9163509.1;Name=HJH9163509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462566.1;locus_tag=O5D79_002013;product=4Fe-4S dicluster domain-containing protein;protein_id=HJH9163509.1;transl_table=11 DALFDJ020000008.1 tpg gene 168431 169681 . - . ID=gene-O5D79_002014;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=O5D79_002014 DALFDJ020000008.1 Protein Homology CDS 168431 169681 . - 0 ID=cds-HJH9163510.1;Parent=gene-O5D79_002014;Dbxref=NCBI_GP:HJH9163510.1;Name=HJH9163510.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462565.1;locus_tag=O5D79_002014;product=valine--pyruvate transaminase;protein_id=HJH9163510.1;transl_table=11 DALFDJ020000008.1 tpg gene 169855 171882 . - . ID=gene-O5D79_002015;Name=O5D79_002015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002015 DALFDJ020000008.1 Protein Homology CDS 169855 171882 . - 0 ID=cds-HJH9163511.1;Parent=gene-O5D79_002015;Dbxref=NCBI_GP:HJH9163511.1;Name=HJH9163511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462564.1;locus_tag=O5D79_002015;product=alpha-amylase;protein_id=HJH9163511.1;transl_table=11 DALFDJ020000008.1 tpg gene 172198 173022 . + . ID=gene-O5D79_002016;Name=O5D79_002016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002016 DALFDJ020000008.1 Protein Homology CDS 172198 173022 . + 0 ID=cds-HJH9163512.1;Parent=gene-O5D79_002016;Dbxref=NCBI_GP:HJH9163512.1;Name=HJH9163512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=O5D79_002016;product=protein bax;protein_id=HJH9163512.1;transl_table=11 DALFDJ020000008.1 tpg gene 173083 174261 . - . ID=gene-O5D79_002017;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=O5D79_002017 DALFDJ020000008.1 Protein Homology CDS 173083 174261 . - 0 ID=cds-HJH9163513.1;Parent=gene-O5D79_002017;Dbxref=NCBI_GP:HJH9163513.1;Name=HJH9163513.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462562.1;locus_tag=O5D79_002017;product=D-xylose utilization transcriptional activator XylR;protein_id=HJH9163513.1;transl_table=11 DALFDJ020000008.1 tpg gene 174624 175946 . + . ID=gene-O5D79_002018;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=O5D79_002018 DALFDJ020000008.1 Protein Homology CDS 174624 175946 . + 0 ID=cds-HJH9163514.1;Parent=gene-O5D79_002018;Dbxref=NCBI_GP:HJH9163514.1;Name=HJH9163514.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=O5D79_002018;product=xylose isomerase;protein_id=HJH9163514.1;transl_table=11 DALFDJ020000008.1 tpg gene 176046 177500 . + . ID=gene-O5D79_002019;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=O5D79_002019 DALFDJ020000008.1 Protein Homology CDS 176046 177500 . + 0 ID=cds-HJH9163515.1;Parent=gene-O5D79_002019;Dbxref=NCBI_GP:HJH9163515.1;Name=HJH9163515.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462560.1;locus_tag=O5D79_002019;product=xylulokinase;protein_id=HJH9163515.1;transl_table=11 DALFDJ020000008.1 tpg gene 177675 178028 . + . ID=gene-O5D79_002020;Name=O5D79_002020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002020 DALFDJ020000008.1 Protein Homology CDS 177675 178028 . + 0 ID=cds-HJH9163516.1;Parent=gene-O5D79_002020;Dbxref=NCBI_GP:HJH9163516.1;Name=HJH9163516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462559.1;locus_tag=O5D79_002020;product=YiaA/YiaB family inner membrane protein;protein_id=HJH9163516.1;transl_table=11 DALFDJ020000008.1 tpg gene 178051 179046 . - . ID=gene-O5D79_002021;Name=O5D79_002021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002021 DALFDJ020000008.1 Protein Homology CDS 178051 179046 . - 0 ID=cds-HJH9163517.1;Parent=gene-O5D79_002021;Dbxref=NCBI_GP:HJH9163517.1;Name=HJH9163517.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462558.1;locus_tag=O5D79_002021;product=acyltransferase;protein_id=HJH9163517.1;transl_table=11 DALFDJ020000008.1 tpg gene 179212 179514 . + . ID=gene-O5D79_002022;Name=O5D79_002022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002022 DALFDJ020000008.1 Protein Homology CDS 179212 179514 . + 0 ID=cds-HJH9163518.1;Parent=gene-O5D79_002022;Dbxref=NCBI_GP:HJH9163518.1;Name=HJH9163518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462557.1;locus_tag=O5D79_002022;product=YsaB family lipoprotein;protein_id=HJH9163518.1;transl_table=11 DALFDJ020000008.1 tpg gene 179653 180564 . + . ID=gene-O5D79_002023;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=O5D79_002023 DALFDJ020000008.1 Protein Homology CDS 179653 180564 . + 0 ID=cds-HJH9163519.1;Parent=gene-O5D79_002023;Dbxref=NCBI_GP:HJH9163519.1;Name=HJH9163519.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462556.1;locus_tag=O5D79_002023;product=glycine--tRNA ligase subunit alpha;protein_id=HJH9163519.1;transl_table=11 DALFDJ020000008.1 tpg gene 180574 182643 . + . ID=gene-O5D79_002024;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=O5D79_002024 DALFDJ020000008.1 Protein Homology CDS 180574 182643 . + 0 ID=cds-HJH9163520.1;Parent=gene-O5D79_002024;Dbxref=NCBI_GP:HJH9163520.1;Name=HJH9163520.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=O5D79_002024;product=glycine--tRNA ligase subunit beta;protein_id=HJH9163520.1;transl_table=11 ##sequence-region DALFDJ020000009.1 1 170381 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000009.1 tpg region 1 170381 . + . ID=DALFDJ020000009.1:1..170381;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000009.1 tpg gene 518 1048 . - . ID=gene-O5D79_002025;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=O5D79_002025 DALFDJ020000009.1 Protein Homology CDS 518 1048 . - 0 ID=cds-HJH9163521.1;Parent=gene-O5D79_002025;Dbxref=NCBI_GP:HJH9163521.1;Name=HJH9163521.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001100812.1;locus_tag=O5D79_002025;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=HJH9163521.1;transl_table=11 DALFDJ020000009.1 tpg gene 1053 1931 . - . ID=gene-O5D79_002026;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=O5D79_002026 DALFDJ020000009.1 Protein Homology CDS 1053 1931 . - 0 ID=cds-HJH9163522.1;Parent=gene-O5D79_002026;Dbxref=NCBI_GP:HJH9163522.1;Name=HJH9163522.1;Ontology_term=GO:0000271,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000857511.1;locus_tag=O5D79_002026;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=HJH9163522.1;transl_table=11 DALFDJ020000009.1 tpg gene 1979 2878 . - . ID=gene-O5D79_002027;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=O5D79_002027 DALFDJ020000009.1 Protein Homology CDS 1979 2878 . - 0 ID=cds-HJH9163523.1;Parent=gene-O5D79_002027;Dbxref=NCBI_GP:HJH9163523.1;Name=HJH9163523.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461041.1;locus_tag=O5D79_002027;product=dTDP-4-dehydrorhamnose reductase;protein_id=HJH9163523.1;transl_table=11 DALFDJ020000009.1 tpg gene 2878 3963 . - . ID=gene-O5D79_002028;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=O5D79_002028 DALFDJ020000009.1 Protein Homology CDS 2878 3963 . - 0 ID=cds-HJH9163524.1;Parent=gene-O5D79_002028;Dbxref=NCBI_GP:HJH9163524.1;Name=HJH9163524.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461042.1;locus_tag=O5D79_002028;product=dTDP-glucose 4%2C6-dehydratase;protein_id=HJH9163524.1;transl_table=11 DALFDJ020000009.1 tpg gene 4340 5233 . - . ID=gene-O5D79_002029;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=O5D79_002029 DALFDJ020000009.1 Protein Homology CDS 4340 5233 . - 0 ID=cds-HJH9163525.1;Parent=gene-O5D79_002029;Dbxref=NCBI_GP:HJH9163525.1;Name=HJH9163525.1;Ontology_term=GO:0006011,GO:0030234;gbkey=CDS;gene=galF;go_function=enzyme regulator activity|0030234||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461043.1;locus_tag=O5D79_002029;product=GalU regulator GalF;protein_id=HJH9163525.1;transl_table=11 DALFDJ020000009.1 tpg gene 5411 6814 . - . ID=gene-O5D79_002030;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=O5D79_002030 DALFDJ020000009.1 Protein Homology CDS 5411 6814 . - 0 ID=cds-HJH9163526.1;Parent=gene-O5D79_002030;Dbxref=NCBI_GP:HJH9163526.1;Name=HJH9163526.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461044.1;locus_tag=O5D79_002030;product=colanic acid biosynthesis protein WcaM;protein_id=HJH9163526.1;transl_table=11 DALFDJ020000009.1 tpg gene 6825 8045 . - . ID=gene-O5D79_002031;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=O5D79_002031 DALFDJ020000009.1 Protein Homology CDS 6825 8045 . - 0 ID=cds-HJH9163527.1;Parent=gene-O5D79_002031;Dbxref=NCBI_GP:HJH9163527.1;Name=HJH9163527.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461045.1;locus_tag=O5D79_002031;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=HJH9163527.1;transl_table=11 DALFDJ020000009.1 tpg gene 8042 9322 . - . ID=gene-O5D79_002032;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=O5D79_002032 DALFDJ020000009.1 Protein Homology CDS 8042 9322 . - 0 ID=cds-HJH9163528.1;Parent=gene-O5D79_002032;Dbxref=NCBI_GP:HJH9163528.1;Name=HJH9163528.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=O5D79_002032;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=HJH9163528.1;transl_table=11 DALFDJ020000009.1 tpg gene 9344 10822 . - . ID=gene-O5D79_002033;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=O5D79_002033 DALFDJ020000009.1 Protein Homology CDS 9344 10822 . - 0 ID=cds-HJH9163529.1;Parent=gene-O5D79_002033;Dbxref=NCBI_GP:HJH9163529.1;Name=HJH9163529.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461047.1;locus_tag=O5D79_002033;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=HJH9163529.1;transl_table=11 DALFDJ020000009.1 tpg gene 10924 12318 . - . ID=gene-O5D79_002034;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=O5D79_002034 DALFDJ020000009.1 Protein Homology CDS 10924 12318 . - 0 ID=cds-HJH9163530.1;Parent=gene-O5D79_002034;Dbxref=NCBI_GP:HJH9163530.1;Name=HJH9163530.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=O5D79_002034;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=HJH9163530.1;transl_table=11 DALFDJ020000009.1 tpg gene 12372 13742 . - . ID=gene-O5D79_002035;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=O5D79_002035 DALFDJ020000009.1 Protein Homology CDS 12372 13742 . - 0 ID=cds-HJH9163531.1;Parent=gene-O5D79_002035;Dbxref=NCBI_GP:HJH9163531.1;Name=HJH9163531.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461049.1;locus_tag=O5D79_002035;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=HJH9163531.1;transl_table=11 DALFDJ020000009.1 tpg gene 13853 15295 . - . ID=gene-O5D79_002036;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=O5D79_002036 DALFDJ020000009.1 Protein Homology CDS 13853 15295 . - 0 ID=cds-HJH9163532.1;Parent=gene-O5D79_002036;Dbxref=NCBI_GP:HJH9163532.1;Name=HJH9163532.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461050.3;locus_tag=O5D79_002036;product=mannose-1-phosphate guanyltransferase;protein_id=HJH9163532.1;transl_table=11 DALFDJ020000009.1 tpg gene 15292 16515 . - . ID=gene-O5D79_002037;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=O5D79_002037 DALFDJ020000009.1 Protein Homology CDS 15292 16515 . - 0 ID=cds-HJH9163533.1;Parent=gene-O5D79_002037;Dbxref=NCBI_GP:HJH9163533.1;Name=HJH9163533.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461051.1;locus_tag=O5D79_002037;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=HJH9163533.1;transl_table=11 DALFDJ020000009.1 tpg gene 16512 16985 . - . ID=gene-O5D79_002038;Name=O5D79_002038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002038 DALFDJ020000009.1 Protein Homology CDS 16512 16985 . - 0 ID=cds-HJH9163534.1;Parent=gene-O5D79_002038;Dbxref=NCBI_GP:HJH9163534.1;Name=HJH9163534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526160.1;locus_tag=O5D79_002038;product=GDP-mannose mannosyl hydrolase;protein_id=HJH9163534.1;transl_table=11 DALFDJ020000009.1 tpg gene 16988 17953 . - . ID=gene-O5D79_002039;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=O5D79_002039 DALFDJ020000009.1 Protein Homology CDS 16988 17953 . - 0 ID=cds-HJH9163535.1;Parent=gene-O5D79_002039;Dbxref=NCBI_GP:HJH9163535.1;Name=HJH9163535.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461053.1;locus_tag=O5D79_002039;product=GDP-L-fucose synthase;protein_id=HJH9163535.1;transl_table=11 DALFDJ020000009.1 tpg gene 17956 19077 . - . ID=gene-O5D79_002040;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=O5D79_002040 DALFDJ020000009.1 Protein Homology CDS 17956 19077 . - 0 ID=cds-HJH9163536.1;Parent=gene-O5D79_002040;Dbxref=NCBI_GP:HJH9163536.1;Name=HJH9163536.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=O5D79_002040;product=GDP-mannose 4%2C6-dehydratase;protein_id=HJH9163536.1;transl_table=11 DALFDJ020000009.1 tpg gene 19101 19655 . - . ID=gene-O5D79_002041;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=O5D79_002041 DALFDJ020000009.1 Protein Homology CDS 19101 19655 . - 0 ID=cds-HJH9163537.1;Parent=gene-O5D79_002041;Dbxref=NCBI_GP:HJH9163537.1;Name=HJH9163537.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=O5D79_002041;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=HJH9163537.1;transl_table=11 DALFDJ020000009.1 tpg gene 19671 20417 . - . ID=gene-O5D79_002042;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=O5D79_002042 DALFDJ020000009.1 Protein Homology CDS 19671 20417 . - 0 ID=cds-HJH9163538.1;Parent=gene-O5D79_002042;Dbxref=NCBI_GP:HJH9163538.1;Name=HJH9163538.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461056.1;locus_tag=O5D79_002042;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=HJH9163538.1;transl_table=11 DALFDJ020000009.1 tpg gene 20430 21644 . - . ID=gene-O5D79_002043;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=O5D79_002043 DALFDJ020000009.1 Protein Homology CDS 20430 21644 . - 0 ID=cds-HJH9163539.1;Parent=gene-O5D79_002043;Dbxref=NCBI_GP:HJH9163539.1;Name=HJH9163539.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461057.1;locus_tag=O5D79_002043;product=colanic acid polymerase WcaD;protein_id=HJH9163539.1;transl_table=11 DALFDJ020000009.1 tpg gene 21619 22836 . - . ID=gene-O5D79_002044;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=O5D79_002044 DALFDJ020000009.1 Protein Homology CDS 21619 22836 . - 0 ID=cds-HJH9163540.1;Parent=gene-O5D79_002044;Dbxref=NCBI_GP:HJH9163540.1;Name=HJH9163540.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461058.1;locus_tag=O5D79_002044;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=HJH9163540.1;transl_table=11 DALFDJ020000009.1 tpg gene 22833 23321 . - . ID=gene-O5D79_002045;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=O5D79_002045 DALFDJ020000009.1 Protein Homology CDS 22833 23321 . - 0 ID=cds-HJH9163541.1;Parent=gene-O5D79_002045;Dbxref=NCBI_GP:HJH9163541.1;Name=HJH9163541.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461059.1;locus_tag=O5D79_002045;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=HJH9163541.1;transl_table=11 DALFDJ020000009.1 tpg gene 23324 24166 . - . ID=gene-O5D79_002046;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=O5D79_002046 DALFDJ020000009.1 Protein Homology CDS 23324 24166 . - 0 ID=cds-HJH9163542.1;Parent=gene-O5D79_002046;Dbxref=NCBI_GP:HJH9163542.1;Name=HJH9163542.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=O5D79_002046;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=HJH9163542.1;transl_table=11 DALFDJ020000009.1 tpg gene 24253 26412 . - . ID=gene-O5D79_002047;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=O5D79_002047 DALFDJ020000009.1 Protein Homology CDS 24253 26412 . - 0 ID=cds-HJH9163543.1;Parent=gene-O5D79_002047;Dbxref=NCBI_GP:HJH9163543.1;Name=HJH9163543.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461061.1;locus_tag=O5D79_002047;product=tyrosine-protein kinase Wzc;protein_id=HJH9163543.1;transl_table=11 DALFDJ020000009.1 tpg gene 26409 26858 . - . ID=gene-O5D79_002048;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=O5D79_002048 DALFDJ020000009.1 Protein Homology CDS 26409 26858 . - 0 ID=cds-HJH9163544.1;Parent=gene-O5D79_002048;Dbxref=NCBI_GP:HJH9163544.1;Name=HJH9163544.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461062.1;locus_tag=O5D79_002048;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=HJH9163544.1;transl_table=11 DALFDJ020000009.1 tpg gene 26864 28003 . - . ID=gene-O5D79_002049;Name=O5D79_002049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002049 DALFDJ020000009.1 Protein Homology CDS 26864 28003 . - 0 ID=cds-HJH9163545.1;Parent=gene-O5D79_002049;Dbxref=NCBI_GP:HJH9163545.1;Name=HJH9163545.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=O5D79_002049;product=polysaccharide export protein;protein_id=HJH9163545.1;transl_table=11 DALFDJ020000009.1 tpg gene 28678 30258 . + . ID=gene-O5D79_002050;Name=O5D79_002050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002050 DALFDJ020000009.1 Protein Homology CDS 28678 30258 . + 0 ID=cds-HJH9163546.1;Parent=gene-O5D79_002050;Dbxref=NCBI_GP:HJH9163546.1;Name=HJH9163546.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461064.1;locus_tag=O5D79_002050;product=TerC family protein;protein_id=HJH9163546.1;transl_table=11 DALFDJ020000009.1 tpg gene 30344 32200 . - . ID=gene-O5D79_002051;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=O5D79_002051 DALFDJ020000009.1 Protein Homology CDS 30344 32200 . - 0 ID=cds-HJH9163547.1;Parent=gene-O5D79_002051;Dbxref=NCBI_GP:HJH9163547.1;Name=HJH9163547.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461065.1;locus_tag=O5D79_002051;product=outer membrane assembly protein AsmA;protein_id=HJH9163547.1;transl_table=11 DALFDJ020000009.1 tpg gene 32239 32820 . - . ID=gene-O5D79_002052;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=O5D79_002052 DALFDJ020000009.1 Protein Homology CDS 32239 32820 . - 0 ID=cds-HJH9163548.1;Parent=gene-O5D79_002052;Dbxref=NCBI_GP:HJH9163548.1;Name=HJH9163548.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=O5D79_002052;product=dCTP deaminase;protein_id=HJH9163548.1;transl_table=11 DALFDJ020000009.1 tpg gene 32911 33552 . - . ID=gene-O5D79_002053;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=O5D79_002053 DALFDJ020000009.1 Protein Homology CDS 32911 33552 . - 0 ID=cds-HJH9163549.1;Parent=gene-O5D79_002053;Dbxref=NCBI_GP:HJH9163549.1;Name=HJH9163549.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=O5D79_002053;product=uridine kinase;protein_id=HJH9163549.1;transl_table=11 DALFDJ020000009.1 tpg gene 33883 36873 . + . ID=gene-O5D79_002054;Name=O5D79_002054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002054 DALFDJ020000009.1 Protein Homology CDS 33883 36873 . + 0 ID=cds-HJH9163550.1;Parent=gene-O5D79_002054;Dbxref=NCBI_GP:HJH9163550.1;Name=HJH9163550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461068.1;locus_tag=O5D79_002054;product=MASE1 domain-containing protein;protein_id=HJH9163550.1;transl_table=11 DALFDJ020000009.1 tpg gene 36841 37710 . - . ID=gene-O5D79_002055;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=O5D79_002055 DALFDJ020000009.1 Protein Homology CDS 36841 37710 . - 0 ID=cds-HJH9163551.1;Parent=gene-O5D79_002055;Dbxref=NCBI_GP:HJH9163551.1;Name=HJH9163551.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461069.1;locus_tag=O5D79_002055;product=DNA-3-methyladenine glycosylase 2;protein_id=HJH9163551.1;transl_table=11 DALFDJ020000009.1 tpg gene 37844 39196 . + . ID=gene-O5D79_002056;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=O5D79_002056 DALFDJ020000009.1 Protein Homology CDS 37844 39196 . + 0 ID=cds-HJH9163552.1;Parent=gene-O5D79_002056;Dbxref=NCBI_GP:HJH9163552.1;Name=HJH9163552.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=O5D79_002056;product=molecular chaperone;protein_id=HJH9163552.1;transl_table=11 DALFDJ020000009.1 tpg gene 39295 39354 . - . ID=gene-O5D79_002057;Name=O5D79_002057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002057 DALFDJ020000009.1 Protein Homology CDS 39295 39354 . - 0 ID=cds-HJH9163553.1;Parent=gene-O5D79_002057;Dbxref=NCBI_GP:HJH9163553.1;Name=HJH9163553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=O5D79_002057;product=type I toxin-antitoxin system Ibs family toxin;protein_id=HJH9163553.1;transl_table=11 DALFDJ020000009.1 tpg gene 39637 40878 . + . ID=gene-O5D79_002058;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=O5D79_002058 DALFDJ020000009.1 Protein Homology CDS 39637 40878 . + 0 ID=cds-HJH9163554.1;Parent=gene-O5D79_002058;Dbxref=NCBI_GP:HJH9163554.1;Name=HJH9163554.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461071.1;locus_tag=O5D79_002058;product=multidrug efflux RND transporter subunit MdtA;protein_id=HJH9163554.1;transl_table=11 DALFDJ020000009.1 tpg gene 40878 44000 . + . ID=gene-O5D79_002059;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=O5D79_002059 DALFDJ020000009.1 Protein Homology CDS 40878 44000 . + 0 ID=cds-HJH9163555.1;Parent=gene-O5D79_002059;Dbxref=NCBI_GP:HJH9163555.1;Name=HJH9163555.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461072.1;locus_tag=O5D79_002059;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=HJH9163555.1;transl_table=11 DALFDJ020000009.1 tpg gene 44001 47081 . + . ID=gene-O5D79_002060;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=O5D79_002060 DALFDJ020000009.1 Protein Homology CDS 44001 47081 . + 0 ID=cds-HJH9163556.1;Parent=gene-O5D79_002060;Dbxref=NCBI_GP:HJH9163556.1;Name=HJH9163556.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461073.1;locus_tag=O5D79_002060;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=HJH9163556.1;transl_table=11 DALFDJ020000009.1 tpg gene 47078 48490 . + . ID=gene-O5D79_002061;Name=O5D79_002061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002061 DALFDJ020000009.1 Protein Homology CDS 47078 48490 . + 0 ID=cds-HJH9163557.1;Parent=gene-O5D79_002061;Dbxref=NCBI_GP:HJH9163557.1;Name=HJH9163557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461074.1;locus_tag=O5D79_002061;product=MFS transporter;protein_id=HJH9163557.1;transl_table=11 DALFDJ020000009.1 tpg gene 48490 49893 . + . ID=gene-O5D79_002062;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=O5D79_002062 DALFDJ020000009.1 Protein Homology CDS 48490 49893 . + 0 ID=cds-HJH9163558.1;Parent=gene-O5D79_002062;Dbxref=NCBI_GP:HJH9163558.1;Name=HJH9163558.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461075.1;locus_tag=O5D79_002062;product=two-component system sensor histidine kinase BaeS;protein_id=HJH9163558.1;transl_table=11 DALFDJ020000009.1 tpg gene 49890 50612 . + . ID=gene-O5D79_002063;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=O5D79_002063 DALFDJ020000009.1 Protein Homology CDS 49890 50612 . + 0 ID=cds-HJH9163559.1;Parent=gene-O5D79_002063;Dbxref=NCBI_GP:HJH9163559.1;Name=HJH9163559.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461076.1;locus_tag=O5D79_002063;product=two-component system response regulator BaeR;protein_id=HJH9163559.1;transl_table=11 DALFDJ020000009.1 tpg gene 50881 52083 . + . ID=gene-O5D79_002064;Name=O5D79_002064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002064 DALFDJ020000009.1 Protein Homology CDS 50881 52083 . + 0 ID=cds-HJH9163560.1;Parent=gene-O5D79_002064;Dbxref=NCBI_GP:HJH9163560.1;Name=HJH9163560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000141078.1;locus_tag=O5D79_002064;product=cytoplasmic protein;protein_id=HJH9163560.1;transl_table=11 DALFDJ020000009.1 tpg gene 52083 52799 . + . ID=gene-O5D79_002065;Name=O5D79_002065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002065 DALFDJ020000009.1 Protein Homology CDS 52083 52799 . + 0 ID=cds-HJH9163561.1;Parent=gene-O5D79_002065;Dbxref=NCBI_GP:HJH9163561.1;Name=HJH9163561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461078.1;locus_tag=O5D79_002065;product=DUF1266 domain-containing protein;protein_id=HJH9163561.1;transl_table=11 DALFDJ020000009.1 tpg gene 52810 54921 . + . ID=gene-O5D79_002066;Name=O5D79_002066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002066 DALFDJ020000009.1 Protein Homology CDS 52810 54921 . + 0 ID=cds-HJH9163562.1;Parent=gene-O5D79_002066;Dbxref=NCBI_GP:HJH9163562.1;Name=HJH9163562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461079.1;locus_tag=O5D79_002066;product=DUF4034 domain-containing protein;protein_id=HJH9163562.1;transl_table=11 DALFDJ020000009.1 tpg gene 54926 55645 . + . ID=gene-O5D79_002067;Name=O5D79_002067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002067 DALFDJ020000009.1 Protein Homology CDS 54926 55645 . + 0 ID=cds-HJH9163563.1;Parent=gene-O5D79_002067;Dbxref=NCBI_GP:HJH9163563.1;Name=HJH9163563.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586683.1;locus_tag=O5D79_002067;product=tetratricopeptide repeat protein;protein_id=HJH9163563.1;transl_table=11 DALFDJ020000009.1 tpg gene 55776 56513 . - . ID=gene-O5D79_002068;Name=O5D79_002068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002068 DALFDJ020000009.1 Protein Homology CDS 55776 56513 . - 0 ID=cds-HJH9163564.1;Parent=gene-O5D79_002068;Dbxref=NCBI_GP:HJH9163564.1;Name=HJH9163564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497704.1;locus_tag=O5D79_002068;product=hypothetical protein;protein_id=HJH9163564.1;transl_table=11 DALFDJ020000009.1 tpg gene 56552 57484 . - . ID=gene-O5D79_002069;Name=O5D79_002069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002069 DALFDJ020000009.1 Protein Homology CDS 56552 57484 . - 0 ID=cds-HJH9163565.1;Parent=gene-O5D79_002069;Dbxref=NCBI_GP:HJH9163565.1;Name=HJH9163565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092682.1;locus_tag=O5D79_002069;product=hypothetical protein;protein_id=HJH9163565.1;transl_table=11 DALFDJ020000009.1 tpg pseudogene 57680 57966 . - . ID=gene-O5D79_002070;Name=O5D79_002070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_002070;pseudo=true DALFDJ020000009.1 Protein Homology CDS 57680 57966 . - 0 ID=cds-O5D79_002070;Parent=gene-O5D79_002070;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=O5D79_002070;product=ISAs1 family transposase;pseudo=true;transl_table=11 DALFDJ020000009.1 tpg gene 58357 58800 . - . ID=gene-O5D79_002071;Name=O5D79_002071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002071 DALFDJ020000009.1 Protein Homology CDS 58357 58800 . - 0 ID=cds-HJH9163566.1;Parent=gene-O5D79_002071;Dbxref=NCBI_GP:HJH9163566.1;Name=HJH9163566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646715.1;locus_tag=O5D79_002071;product=hypothetical protein;protein_id=HJH9163566.1;transl_table=11 DALFDJ020000009.1 tpg gene 59353 59772 . - . ID=gene-O5D79_002072;Name=O5D79_002072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002072 DALFDJ020000009.1 Protein Homology CDS 59353 59772 . - 0 ID=cds-HJH9163567.1;Parent=gene-O5D79_002072;Dbxref=NCBI_GP:HJH9163567.1;Name=HJH9163567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000502176.1;locus_tag=O5D79_002072;product=hypothetical protein;protein_id=HJH9163567.1;transl_table=11 DALFDJ020000009.1 tpg gene 60428 61045 . - . ID=gene-O5D79_002073;Name=O5D79_002073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002073 DALFDJ020000009.1 Protein Homology CDS 60428 61045 . - 0 ID=cds-HJH9163568.1;Parent=gene-O5D79_002073;Dbxref=NCBI_GP:HJH9163568.1;Name=HJH9163568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528503.1;locus_tag=O5D79_002073;product=hypothetical protein;protein_id=HJH9163568.1;transl_table=11 DALFDJ020000009.1 tpg gene 61209 62570 . + . ID=gene-O5D79_002074;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=O5D79_002074 DALFDJ020000009.1 Protein Homology CDS 61209 62570 . + 0 ID=cds-HJH9163569.1;Parent=gene-O5D79_002074;Dbxref=NCBI_GP:HJH9163569.1;Name=HJH9163569.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461080.1;locus_tag=O5D79_002074;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=HJH9163569.1;transl_table=11 DALFDJ020000009.1 tpg pseudogene 63022 63201 . + . ID=gene-O5D79_002075;Name=O5D79_002075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_002075;pseudo=true DALFDJ020000009.1 Protein Homology CDS 63022 63201 . + 0 ID=cds-O5D79_002075;Parent=gene-O5D79_002075;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461081.1;locus_tag=O5D79_002075;product=non-LEE encoded effector protein NleB;pseudo=true;transl_table=11 DALFDJ020000009.1 tpg gene 63211 63627 . - . ID=gene-O5D79_002076;Name=O5D79_002076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002076 DALFDJ020000009.1 Protein Homology CDS 63211 63627 . - 0 ID=cds-HJH9163570.1;Parent=gene-O5D79_002076;Dbxref=NCBI_GP:HJH9163570.1;Name=HJH9163570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461082.1;locus_tag=O5D79_002076;product=CesT family type III secretion system chaperone;protein_id=HJH9163570.1;transl_table=11 DALFDJ020000009.1 tpg gene 63749 64084 . - . ID=gene-O5D79_002077;Name=steD;gbkey=Gene;gene=steD;gene_biotype=protein_coding;locus_tag=O5D79_002077 DALFDJ020000009.1 Protein Homology CDS 63749 64084 . - 0 ID=cds-HJH9163571.1;Parent=gene-O5D79_002077;Dbxref=NCBI_GP:HJH9163571.1;Name=HJH9163571.1;gbkey=CDS;gene=steD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461083.1;locus_tag=O5D79_002077;product=type III secretion system effector SteD;protein_id=HJH9163571.1;transl_table=11 DALFDJ020000009.1 tpg gene 64646 65545 . + . ID=gene-O5D79_002078;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=O5D79_002078 DALFDJ020000009.1 Protein Homology CDS 64646 65545 . + 0 ID=cds-HJH9163572.1;Parent=gene-O5D79_002078;Dbxref=NCBI_GP:HJH9163572.1;Name=HJH9163572.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461084.1;locus_tag=O5D79_002078;product=lipid kinase YegS;protein_id=HJH9163572.1;transl_table=11 DALFDJ020000009.1 tpg gene 65598 66650 . - . ID=gene-O5D79_002079;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=O5D79_002079 DALFDJ020000009.1 Protein Homology CDS 65598 66650 . - 0 ID=cds-HJH9163573.1;Parent=gene-O5D79_002079;Dbxref=NCBI_GP:HJH9163573.1;Name=HJH9163573.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=O5D79_002079;product=class I fructose-bisphosphate aldolase;protein_id=HJH9163573.1;transl_table=11 DALFDJ020000009.1 tpg gene 66903 68174 . + . ID=gene-O5D79_002080;Name=O5D79_002080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002080 DALFDJ020000009.1 Protein Homology CDS 66903 68174 . + 0 ID=cds-HJH9163574.1;Parent=gene-O5D79_002080;Dbxref=NCBI_GP:HJH9163574.1;Name=HJH9163574.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461086.1;locus_tag=O5D79_002080;product=nucleoside permease;protein_id=HJH9163574.1;transl_table=11 DALFDJ020000009.1 tpg gene 68171 69175 . + . ID=gene-O5D79_002081;Name=O5D79_002081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002081 DALFDJ020000009.1 Protein Homology CDS 68171 69175 . + 0 ID=cds-HJH9163575.1;Parent=gene-O5D79_002081;Dbxref=NCBI_GP:HJH9163575.1;Name=HJH9163575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461087.1;locus_tag=O5D79_002081;product=ADP-ribosylglycohydrolase family protein;protein_id=HJH9163575.1;transl_table=11 DALFDJ020000009.1 tpg gene 69172 70137 . + . ID=gene-O5D79_002082;Name=O5D79_002082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002082 DALFDJ020000009.1 Protein Homology CDS 69172 70137 . + 0 ID=cds-HJH9163576.1;Parent=gene-O5D79_002082;Dbxref=NCBI_GP:HJH9163576.1;Name=HJH9163576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461088.1;locus_tag=O5D79_002082;product=PfkB family carbohydrate kinase;protein_id=HJH9163576.1;transl_table=11 DALFDJ020000009.1 tpg gene 70111 70857 . - . ID=gene-O5D79_002083;Name=O5D79_002083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002083 DALFDJ020000009.1 Protein Homology CDS 70111 70857 . - 0 ID=cds-HJH9163577.1;Parent=gene-O5D79_002083;Dbxref=NCBI_GP:HJH9163577.1;Name=HJH9163577.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461089.1;locus_tag=O5D79_002083;product=GntR family transcriptional regulator;protein_id=HJH9163577.1;transl_table=11 DALFDJ020000009.1 tpg gene 70893 71693 . - . ID=gene-O5D79_002084;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=O5D79_002084 DALFDJ020000009.1 Protein Homology CDS 70893 71693 . - 0 ID=cds-HJH9163578.1;Parent=gene-O5D79_002084;Dbxref=NCBI_GP:HJH9163578.1;Name=HJH9163578.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461090.1;locus_tag=O5D79_002084;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=HJH9163578.1;transl_table=11 DALFDJ020000009.1 tpg gene 71680 72477 . - . ID=gene-O5D79_002085;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=O5D79_002085 DALFDJ020000009.1 Protein Homology CDS 71680 72477 . - 0 ID=cds-HJH9163579.1;Parent=gene-O5D79_002085;Dbxref=NCBI_GP:HJH9163579.1;Name=HJH9163579.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461091.1;locus_tag=O5D79_002085;product=hydroxyethylthiazole kinase;protein_id=HJH9163579.1;transl_table=11 DALFDJ020000009.1 cmsearch riboswitch 72509 72605 . - . ID=id-DALFDJ020000009.1:72509..72605;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch DALFDJ020000009.1 tpg gene 72887 73201 . + . ID=gene-O5D79_002086;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=O5D79_002086 DALFDJ020000009.1 Protein Homology CDS 72887 73201 . + 0 ID=cds-HJH9163580.1;Parent=gene-O5D79_002086;Dbxref=NCBI_GP:HJH9163580.1;Name=HJH9163580.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461092.1;locus_tag=O5D79_002086;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=HJH9163580.1;transl_table=11 DALFDJ020000009.1 tpg gene 73243 74250 . - . ID=gene-O5D79_002087;Name=O5D79_002087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002087 DALFDJ020000009.1 Protein Homology CDS 73243 74250 . - 0 ID=cds-HJH9163581.1;Parent=gene-O5D79_002087;Dbxref=NCBI_GP:HJH9163581.1;Name=HJH9163581.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001269814.1;locus_tag=O5D79_002087;product=fimbrial protein;protein_id=HJH9163581.1;transl_table=11 DALFDJ020000009.1 tpg gene 74259 76739 . - . ID=gene-O5D79_002088;Name=O5D79_002088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002088 DALFDJ020000009.1 Protein Homology CDS 74259 76739 . - 0 ID=cds-HJH9163582.1;Parent=gene-O5D79_002088;Dbxref=NCBI_GP:HJH9163582.1;Name=HJH9163582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310942.1;locus_tag=O5D79_002088;product=fimbrial biogenesis outer membrane usher protein;protein_id=HJH9163582.1;transl_table=11 DALFDJ020000009.1 tpg gene 76752 77432 . - . ID=gene-O5D79_002089;Name=O5D79_002089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002089 DALFDJ020000009.1 Protein Homology CDS 76752 77432 . - 0 ID=cds-HJH9163583.1;Parent=gene-O5D79_002089;Dbxref=NCBI_GP:HJH9163583.1;Name=HJH9163583.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734581.1;locus_tag=O5D79_002089;product=fimbria/pilus periplasmic chaperone;protein_id=HJH9163583.1;transl_table=11 DALFDJ020000009.1 tpg gene 77479 78024 . - . ID=gene-O5D79_002090;Name=O5D79_002090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002090 DALFDJ020000009.1 Protein Homology CDS 77479 78024 . - 0 ID=cds-HJH9163584.1;Parent=gene-O5D79_002090;Dbxref=NCBI_GP:HJH9163584.1;Name=HJH9163584.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000830494.1;locus_tag=O5D79_002090;product=fimbrial protein;protein_id=HJH9163584.1;transl_table=11 DALFDJ020000009.1 tpg gene 78303 78584 . - . ID=gene-O5D79_002091;Name=O5D79_002091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002091 DALFDJ020000009.1 Protein Homology CDS 78303 78584 . - 0 ID=cds-HJH9163585.1;Parent=gene-O5D79_002091;Dbxref=NCBI_GP:HJH9163585.1;Name=HJH9163585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000760407.1;locus_tag=O5D79_002091;product=DUF2574 family protein;protein_id=HJH9163585.1;transl_table=11 DALFDJ020000009.1 tpg gene 78851 79960 . - . ID=gene-O5D79_002092;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=O5D79_002092 DALFDJ020000009.1 Protein Homology CDS 78851 79960 . - 0 ID=cds-HJH9163586.1;Parent=gene-O5D79_002092;Dbxref=NCBI_GP:HJH9163586.1;Name=HJH9163586.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461098.1;locus_tag=O5D79_002092;product=iron-sulfur cluster carrier protein ApbC;protein_id=HJH9163586.1;transl_table=11 DALFDJ020000009.1 tpg gene 80125 82158 . + . ID=gene-O5D79_002093;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=O5D79_002093 DALFDJ020000009.1 Protein Homology CDS 80125 82158 . + 0 ID=cds-HJH9163587.1;Parent=gene-O5D79_002093;Dbxref=NCBI_GP:HJH9163587.1;Name=HJH9163587.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461099.1;locus_tag=O5D79_002093;product=methionine--tRNA ligase;protein_id=HJH9163587.1;transl_table=11 DALFDJ020000009.1 tpg gene 82399 82857 . + . ID=gene-O5D79_002094;Name=O5D79_002094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002094 DALFDJ020000009.1 Protein Homology CDS 82399 82857 . + 0 ID=cds-HJH9163588.1;Parent=gene-O5D79_002094;Dbxref=NCBI_GP:HJH9163588.1;Name=HJH9163588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461100.1;locus_tag=O5D79_002094;product=YehR family lipoprotein;protein_id=HJH9163588.1;transl_table=11 DALFDJ020000009.1 tpg gene 83029 83559 . + . ID=gene-O5D79_002095;Name=O5D79_002095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002095 DALFDJ020000009.1 Protein Homology CDS 83029 83559 . + 0 ID=cds-HJH9163589.1;Parent=gene-O5D79_002095;Dbxref=NCBI_GP:HJH9163589.1;Name=HJH9163589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461101.1;locus_tag=O5D79_002095;product=YehR family lipoprotein;protein_id=HJH9163589.1;transl_table=11 DALFDJ020000009.1 tpg gene 83616 84083 . - . ID=gene-O5D79_002096;Name=O5D79_002096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002096 DALFDJ020000009.1 Protein Homology CDS 83616 84083 . - 0 ID=cds-HJH9163590.1;Parent=gene-O5D79_002096;Dbxref=NCBI_GP:HJH9163590.1;Name=HJH9163590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461102.1;locus_tag=O5D79_002096;product=DUF1456 family protein;protein_id=HJH9163590.1;transl_table=11 DALFDJ020000009.1 tpg gene 84130 84849 . - . ID=gene-O5D79_002097;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=O5D79_002097 DALFDJ020000009.1 Protein Homology CDS 84130 84849 . - 0 ID=cds-HJH9163591.1;Parent=gene-O5D79_002097;Dbxref=NCBI_GP:HJH9163591.1;Name=HJH9163591.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=O5D79_002097;product=two-component system response regulator BtsR;protein_id=HJH9163591.1;transl_table=11 DALFDJ020000009.1 tpg gene 84846 86531 . - . ID=gene-O5D79_002098;Name=O5D79_002098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002098 DALFDJ020000009.1 Protein Homology CDS 84846 86531 . - 0 ID=cds-HJH9163592.1;Parent=gene-O5D79_002098;Dbxref=NCBI_GP:HJH9163592.1;Name=HJH9163592.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461104.1;locus_tag=O5D79_002098;product=LytS/YhcK type 5TM receptor domain-containing protein;protein_id=HJH9163592.1;transl_table=11 DALFDJ020000009.1 tpg gene 86754 87485 . + . ID=gene-O5D79_002099;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=O5D79_002099 DALFDJ020000009.1 Protein Homology CDS 86754 87485 . + 0 ID=cds-HJH9163593.1;Parent=gene-O5D79_002099;Dbxref=NCBI_GP:HJH9163593.1;Name=HJH9163593.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461105.1;locus_tag=O5D79_002099;product=HTH-type transcriptional regulator MlrA;protein_id=HJH9163593.1;transl_table=11 DALFDJ020000009.1 tpg gene 87545 87652 . + . ID=gene-O5D79_002100;Name=O5D79_002100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002100 DALFDJ020000009.1 Protein Homology CDS 87545 87652 . + 0 ID=cds-HJH9163594.1;Parent=gene-O5D79_002100;Dbxref=NCBI_GP:HJH9163594.1;Name=HJH9163594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461106.1;locus_tag=O5D79_002100;product=protein YohO;protein_id=HJH9163594.1;transl_table=11 DALFDJ020000009.1 tpg gene 87633 88364 . - . ID=gene-O5D79_002101;Name=O5D79_002101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002101 DALFDJ020000009.1 Protein Homology CDS 87633 88364 . - 0 ID=cds-HJH9163595.1;Parent=gene-O5D79_002101;Dbxref=NCBI_GP:HJH9163595.1;Name=HJH9163595.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461107.1;locus_tag=O5D79_002101;product=ABC transporter permease;protein_id=HJH9163595.1;transl_table=11 DALFDJ020000009.1 tpg gene 88348 89295 . - . ID=gene-O5D79_002102;Name=O5D79_002102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002102 DALFDJ020000009.1 Protein Homology CDS 88348 89295 . - 0 ID=cds-HJH9163596.1;Parent=gene-O5D79_002102;Dbxref=NCBI_GP:HJH9163596.1;Name=HJH9163596.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461108.1;locus_tag=O5D79_002102;product=ABC transporter ATP-binding protein;protein_id=HJH9163596.1;transl_table=11 DALFDJ020000009.1 tpg gene 89288 90457 . - . ID=gene-O5D79_002103;Name=O5D79_002103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002103 DALFDJ020000009.1 Protein Homology CDS 89288 90457 . - 0 ID=cds-HJH9163597.1;Parent=gene-O5D79_002103;Dbxref=NCBI_GP:HJH9163597.1;Name=HJH9163597.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461109.1;locus_tag=O5D79_002103;product=ABC transporter permease;protein_id=HJH9163597.1;transl_table=11 DALFDJ020000009.1 tpg gene 90461 91378 . - . ID=gene-O5D79_002104;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=O5D79_002104 DALFDJ020000009.1 Protein Homology CDS 90461 91378 . - 0 ID=cds-HJH9163598.1;Parent=gene-O5D79_002104;Dbxref=NCBI_GP:HJH9163598.1;Name=HJH9163598.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461110.1;locus_tag=O5D79_002104;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=HJH9163598.1;transl_table=11 DALFDJ020000009.1 tpg gene 91559 93856 . - . ID=gene-O5D79_002105;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=O5D79_002105 DALFDJ020000009.1 Protein Homology CDS 91559 93856 . - 0 ID=cds-HJH9163599.1;Parent=gene-O5D79_002105;Dbxref=NCBI_GP:HJH9163599.1;Name=HJH9163599.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461111.1;locus_tag=O5D79_002105;product=beta-glucosidase BglX;protein_id=HJH9163599.1;transl_table=11 DALFDJ020000009.1 tpg gene 94123 95853 . + . ID=gene-O5D79_002106;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=O5D79_002106 DALFDJ020000009.1 Protein Homology CDS 94123 95853 . + 0 ID=cds-HJH9163600.1;Parent=gene-O5D79_002106;Dbxref=NCBI_GP:HJH9163600.1;Name=HJH9163600.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461112.1;locus_tag=O5D79_002106;product=D-lactate dehydrogenase;protein_id=HJH9163600.1;transl_table=11 DALFDJ020000009.1 tpg gene 95912 96859 . - . ID=gene-O5D79_002107;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=O5D79_002107 DALFDJ020000009.1 Protein Homology CDS 95912 96859 . - 0 ID=cds-HJH9163601.1;Parent=gene-O5D79_002107;Dbxref=NCBI_GP:HJH9163601.1;Name=HJH9163601.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461113.1;locus_tag=O5D79_002107;product=D-alanyl-D-alanine endopeptidase;protein_id=HJH9163601.1;transl_table=11 DALFDJ020000009.1 tpg gene 97025 97612 . - . ID=gene-O5D79_002108;Name=O5D79_002108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002108 DALFDJ020000009.1 Protein Homology CDS 97025 97612 . - 0 ID=cds-HJH9163602.1;Parent=gene-O5D79_002108;Dbxref=NCBI_GP:HJH9163602.1;Name=HJH9163602.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=O5D79_002108;product=Yip1 family protein;protein_id=HJH9163602.1;transl_table=11 DALFDJ020000009.1 tpg gene 97771 98340 . + . ID=gene-O5D79_002109;Name=O5D79_002109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002109 DALFDJ020000009.1 Protein Homology CDS 97771 98340 . + 0 ID=cds-HJH9163603.1;Parent=gene-O5D79_002109;Dbxref=NCBI_GP:HJH9163603.1;Name=HJH9163603.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669449.1;locus_tag=O5D79_002109;product=DedA family protein;protein_id=HJH9163603.1;transl_table=11 DALFDJ020000009.1 tpg gene 98389 99150 . - . ID=gene-O5D79_002110;Name=O5D79_002110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002110 DALFDJ020000009.1 Protein Homology CDS 98389 99150 . - 0 ID=cds-HJH9163604.1;Parent=gene-O5D79_002110;Dbxref=NCBI_GP:HJH9163604.1;Name=HJH9163604.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461116.1;locus_tag=O5D79_002110;product=SDR family oxidoreductase;protein_id=HJH9163604.1;transl_table=11 DALFDJ020000009.1 tpg gene 99216 100652 . - . ID=gene-O5D79_002111;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=O5D79_002111 DALFDJ020000009.1 Protein Homology CDS 99216 100652 . - 0 ID=cds-HJH9163605.1;Parent=gene-O5D79_002111;Dbxref=NCBI_GP:HJH9163605.1;Name=HJH9163605.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461117.1;locus_tag=O5D79_002111;product=multidrug resistance outer membrane protein MdtQ;protein_id=HJH9163605.1;transl_table=11 DALFDJ020000009.1 tpg gene 100970 101053 . + . ID=gene-O5D79_002112;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=O5D79_002112 DALFDJ020000009.1 Protein Homology CDS 100970 101053 . + 0 ID=cds-HJH9163606.1;Parent=gene-O5D79_002112;Dbxref=NCBI_GP:HJH9163606.1;Name=HJH9163606.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=O5D79_002112;product=small membrane protein YohP;protein_id=HJH9163606.1;transl_table=11 DALFDJ020000009.1 tpg gene 101111 102049 . - . ID=gene-O5D79_002113;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=O5D79_002113 DALFDJ020000009.1 Protein Homology CDS 101111 102049 . - 0 ID=cds-HJH9163607.1;Parent=gene-O5D79_002113;Dbxref=NCBI_GP:HJH9163607.1;Name=HJH9163607.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461119.1;locus_tag=O5D79_002113;product=tRNA dihydrouridine(16) synthase DusC;protein_id=HJH9163607.1;transl_table=11 DALFDJ020000009.1 tpg gene 102158 103351 . - . ID=gene-O5D79_002114;Name=O5D79_002114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002114 DALFDJ020000009.1 Protein Homology CDS 102158 103351 . - 0 ID=cds-HJH9163608.1;Parent=gene-O5D79_002114;Dbxref=NCBI_GP:HJH9163608.1;Name=HJH9163608.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461120.1;locus_tag=O5D79_002114;product=3-hydroxybenzoate 6-monooxygenase;protein_id=HJH9163608.1;transl_table=11 DALFDJ020000009.1 tpg gene 103366 104010 . - . ID=gene-O5D79_002115;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=O5D79_002115 DALFDJ020000009.1 Protein Homology CDS 103366 104010 . - 0 ID=cds-HJH9163609.1;Parent=gene-O5D79_002115;Dbxref=NCBI_GP:HJH9163609.1;Name=HJH9163609.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034,GO:0005737;gbkey=CDS;gene=maiA;go_component=cytoplasm|0005737||IEA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461121.1;locus_tag=O5D79_002115;product=maleylacetoacetate isomerase;protein_id=HJH9163609.1;transl_table=11 DALFDJ020000009.1 tpg gene 104019 104720 . - . ID=gene-O5D79_002116;Name=O5D79_002116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002116 DALFDJ020000009.1 Protein Homology CDS 104019 104720 . - 0 ID=cds-HJH9163610.1;Parent=gene-O5D79_002116;Dbxref=NCBI_GP:HJH9163610.1;Name=HJH9163610.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461122.1;locus_tag=O5D79_002116;product=fumarylacetoacetate hydrolase family protein;protein_id=HJH9163610.1;transl_table=11 DALFDJ020000009.1 tpg gene 104736 105773 . - . ID=gene-O5D79_002117;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=O5D79_002117 DALFDJ020000009.1 Protein Homology CDS 104736 105773 . - 0 ID=cds-HJH9163611.1;Parent=gene-O5D79_002117;Dbxref=NCBI_GP:HJH9163611.1;Name=HJH9163611.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461123.1;locus_tag=O5D79_002117;product=gentisate 1%2C2-dioxygenase;protein_id=HJH9163611.1;transl_table=11 DALFDJ020000009.1 tpg gene 105785 107143 . - . ID=gene-O5D79_002118;Name=mhbT;gbkey=Gene;gene=mhbT;gene_biotype=protein_coding;locus_tag=O5D79_002118 DALFDJ020000009.1 Protein Homology CDS 105785 107143 . - 0 ID=cds-HJH9163612.1;Parent=gene-O5D79_002118;Dbxref=NCBI_GP:HJH9163612.1;Name=HJH9163612.1;gbkey=CDS;gene=mhbT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461124.1;locus_tag=O5D79_002118;product=3-hydroxybenzoate transporter MhbT;protein_id=HJH9163612.1;transl_table=11 DALFDJ020000009.1 tpg gene 107269 108177 . + . ID=gene-O5D79_002119;Name=O5D79_002119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002119 DALFDJ020000009.1 Protein Homology CDS 107269 108177 . + 0 ID=cds-HJH9163613.1;Parent=gene-O5D79_002119;Dbxref=NCBI_GP:HJH9163613.1;Name=HJH9163613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461125.1;locus_tag=O5D79_002119;product=LysR substrate-binding domain-containing protein;protein_id=HJH9163613.1;transl_table=11 DALFDJ020000009.1 tpg gene 108309 108707 . + . ID=gene-O5D79_002120;Name=O5D79_002120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002120 DALFDJ020000009.1 Protein Homology CDS 108309 108707 . + 0 ID=cds-HJH9163614.1;Parent=gene-O5D79_002120;Dbxref=NCBI_GP:HJH9163614.1;Name=HJH9163614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461126.1;locus_tag=O5D79_002120;product=CidA/LrgA family protein;protein_id=HJH9163614.1;transl_table=11 DALFDJ020000009.1 tpg gene 108704 109399 . + . ID=gene-O5D79_002121;Name=O5D79_002121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002121 DALFDJ020000009.1 Protein Homology CDS 108704 109399 . + 0 ID=cds-HJH9163615.1;Parent=gene-O5D79_002121;Dbxref=NCBI_GP:HJH9163615.1;Name=HJH9163615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461127.1;locus_tag=O5D79_002121;product=CidB/LrgB family autolysis modulator;protein_id=HJH9163615.1;transl_table=11 DALFDJ020000009.1 tpg gene 109553 110437 . + . ID=gene-O5D79_002122;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=O5D79_002122 DALFDJ020000009.1 Protein Homology CDS 109553 110437 . + 0 ID=cds-HJH9163616.1;Parent=gene-O5D79_002122;Dbxref=NCBI_GP:HJH9163616.1;Name=HJH9163616.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461128.1;locus_tag=O5D79_002122;product=cytidine deaminase;protein_id=HJH9163616.1;transl_table=11 DALFDJ020000009.1 tpg gene 110614 111333 . + . ID=gene-O5D79_002123;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=O5D79_002123 DALFDJ020000009.1 Protein Homology CDS 110614 111333 . + 0 ID=cds-HJH9163617.1;Parent=gene-O5D79_002123;Dbxref=NCBI_GP:HJH9163617.1;Name=HJH9163617.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461129.1;locus_tag=O5D79_002123;product=outer membrane permeability protein SanA;protein_id=HJH9163617.1;transl_table=11 DALFDJ020000009.1 tpg gene 111330 111575 . + . ID=gene-O5D79_002124;Name=O5D79_002124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002124 DALFDJ020000009.1 Protein Homology CDS 111330 111575 . + 0 ID=cds-HJH9163618.1;Parent=gene-O5D79_002124;Dbxref=NCBI_GP:HJH9163618.1;Name=HJH9163618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461130.1;locus_tag=O5D79_002124;product=DUF2542 family protein;protein_id=HJH9163618.1;transl_table=11 DALFDJ020000009.1 tpg gene 111780 113021 . + . ID=gene-O5D79_002125;Name=O5D79_002125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002125 DALFDJ020000009.1 Protein Homology CDS 111780 113021 . + 0 ID=cds-HJH9163619.1;Parent=gene-O5D79_002125;Dbxref=NCBI_GP:HJH9163619.1;Name=HJH9163619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461131.1;locus_tag=O5D79_002125;product=NAD(P)-dependent oxidoreductase;protein_id=HJH9163619.1;transl_table=11 DALFDJ020000009.1 tpg gene 113015 114250 . + . ID=gene-O5D79_002126;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=O5D79_002126 DALFDJ020000009.1 Protein Homology CDS 113015 114250 . + 0 ID=cds-HJH9163620.1;Parent=gene-O5D79_002126;Dbxref=NCBI_GP:HJH9163620.1;Name=HJH9163620.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461132.1;locus_tag=O5D79_002126;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=HJH9163620.1;transl_table=11 DALFDJ020000009.1 tpg gene 114325 115335 . - . ID=gene-O5D79_002127;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=O5D79_002127 DALFDJ020000009.1 Protein Homology CDS 114325 115335 . - 0 ID=cds-HJH9163621.1;Parent=gene-O5D79_002127;Dbxref=NCBI_GP:HJH9163621.1;Name=HJH9163621.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=O5D79_002127;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=HJH9163621.1;transl_table=11 DALFDJ020000009.1 tpg gene 115351 116871 . - . ID=gene-O5D79_002128;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=O5D79_002128 DALFDJ020000009.1 Protein Homology CDS 115351 116871 . - 0 ID=cds-HJH9163622.1;Parent=gene-O5D79_002128;Dbxref=NCBI_GP:HJH9163622.1;Name=HJH9163622.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=O5D79_002128;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=HJH9163622.1;transl_table=11 DALFDJ020000009.1 tpg gene 117005 118003 . - . ID=gene-O5D79_002129;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=O5D79_002129 DALFDJ020000009.1 Protein Homology CDS 117005 118003 . - 0 ID=cds-HJH9163623.1;Parent=gene-O5D79_002129;Dbxref=NCBI_GP:HJH9163623.1;Name=HJH9163623.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461135.1;locus_tag=O5D79_002129;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=HJH9163623.1;transl_table=11 DALFDJ020000009.1 tpg gene 118502 119524 . - . ID=gene-O5D79_002130;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=O5D79_002130 DALFDJ020000009.1 Protein Homology CDS 118502 119524 . - 0 ID=cds-HJH9163624.1;Parent=gene-O5D79_002130;Dbxref=NCBI_GP:HJH9163624.1;Name=HJH9163624.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461136.1;locus_tag=O5D79_002130;product=HTH-type transcriptional regulator GalS;protein_id=HJH9163624.1;transl_table=11 DALFDJ020000009.1 tpg gene 119674 120816 . - . ID=gene-O5D79_002131;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=O5D79_002131 DALFDJ020000009.1 Protein Homology CDS 119674 120816 . - 0 ID=cds-HJH9163625.1;Parent=gene-O5D79_002131;Dbxref=NCBI_GP:HJH9163625.1;Name=HJH9163625.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461137.1;locus_tag=O5D79_002131;product=DUF418 domain-containing protein YeiB;protein_id=HJH9163625.1;transl_table=11 DALFDJ020000009.1 tpg gene 120831 121499 . - . ID=gene-O5D79_002132;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=O5D79_002132 DALFDJ020000009.1 Protein Homology CDS 120831 121499 . - 0 ID=cds-HJH9163626.1;Parent=gene-O5D79_002132;Dbxref=NCBI_GP:HJH9163626.1;Name=HJH9163626.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461138.1;locus_tag=O5D79_002132;product=GTP cyclohydrolase I FolE;protein_id=HJH9163626.1;transl_table=11 DALFDJ020000009.1 tpg gene 121829 122686 . + . ID=gene-O5D79_002133;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=O5D79_002133 DALFDJ020000009.1 Protein Homology CDS 121829 122686 . + 0 ID=cds-HJH9163627.1;Parent=gene-O5D79_002133;Dbxref=NCBI_GP:HJH9163627.1;Name=HJH9163627.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461139.2;locus_tag=O5D79_002133;product=S-formylglutathione hydrolase;protein_id=HJH9163627.1;transl_table=11 DALFDJ020000009.1 tpg gene 122675 123064 . - . ID=gene-O5D79_002134;Name=O5D79_002134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002134 DALFDJ020000009.1 Protein Homology CDS 122675 123064 . - 0 ID=cds-HJH9163628.1;Parent=gene-O5D79_002134;Dbxref=NCBI_GP:HJH9163628.1;Name=HJH9163628.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461140.1;locus_tag=O5D79_002134;product=helix-turn-helix domain-containing protein;protein_id=HJH9163628.1;transl_table=11 DALFDJ020000009.1 tpg gene 123069 124436 . - . ID=gene-O5D79_002135;Name=O5D79_002135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002135 DALFDJ020000009.1 Protein Homology CDS 123069 124436 . - 0 ID=cds-HJH9163629.1;Parent=gene-O5D79_002135;Dbxref=NCBI_GP:HJH9163629.1;Name=HJH9163629.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461141.1;locus_tag=O5D79_002135;product=L-serine ammonia-lyase;protein_id=HJH9163629.1;transl_table=11 DALFDJ020000009.1 tpg gene 124653 125540 . + . ID=gene-O5D79_002136;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=O5D79_002136 DALFDJ020000009.1 Protein Homology CDS 124653 125540 . + 0 ID=cds-HJH9163630.1;Parent=gene-O5D79_002136;Dbxref=NCBI_GP:HJH9163630.1;Name=HJH9163630.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461142.1;locus_tag=O5D79_002136;product=phosphoserine phosphatase SerB;protein_id=HJH9163630.1;transl_table=11 DALFDJ020000009.1 tpg gene 125573 126895 . + . ID=gene-O5D79_002137;Name=O5D79_002137;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002137 DALFDJ020000009.1 Protein Homology CDS 125573 126895 . + 0 ID=cds-HJH9163631.1;Parent=gene-O5D79_002137;Dbxref=NCBI_GP:HJH9163631.1;Name=HJH9163631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461143.1;locus_tag=O5D79_002137;product=MFS transporter;protein_id=HJH9163631.1;transl_table=11 DALFDJ020000009.1 tpg gene 126939 128930 . - . ID=gene-O5D79_002138;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=O5D79_002138 DALFDJ020000009.1 Protein Homology CDS 126939 128930 . - 0 ID=cds-HJH9163632.1;Parent=gene-O5D79_002138;Dbxref=NCBI_GP:HJH9163632.1;Name=HJH9163632.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=O5D79_002138;product=catecholate siderophore receptor CirA;protein_id=HJH9163632.1;transl_table=11 DALFDJ020000009.1 tpg gene 129277 130746 . - . ID=gene-O5D79_002139;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=O5D79_002139 DALFDJ020000009.1 Protein Homology CDS 129277 130746 . - 0 ID=cds-HJH9163633.1;Parent=gene-O5D79_002139;Dbxref=NCBI_GP:HJH9163633.1;Name=HJH9163633.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461145.1;locus_tag=O5D79_002139;product=lysine-specific permease;protein_id=HJH9163633.1;transl_table=11 DALFDJ020000009.1 tpg gene 130936 131799 . - . ID=gene-O5D79_002140;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=O5D79_002140 DALFDJ020000009.1 Protein Homology CDS 130936 131799 . - 0 ID=cds-HJH9163634.1;Parent=gene-O5D79_002140;Dbxref=NCBI_GP:HJH9163634.1;Name=HJH9163634.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461146.1;locus_tag=O5D79_002140;product=DNA-binding transcriptional regulator YeiE;protein_id=HJH9163634.1;transl_table=11 DALFDJ020000009.1 tpg gene 131920 132969 . + . ID=gene-O5D79_002141;Name=O5D79_002141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002141 DALFDJ020000009.1 Protein Homology CDS 131920 132969 . + 0 ID=cds-HJH9163635.1;Parent=gene-O5D79_002141;Dbxref=NCBI_GP:HJH9163635.1;Name=HJH9163635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461147.1;locus_tag=O5D79_002141;product=YeiH family protein;protein_id=HJH9163635.1;transl_table=11 DALFDJ020000009.1 tpg gene 133048 133905 . + . ID=gene-O5D79_002142;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=O5D79_002142 DALFDJ020000009.1 Protein Homology CDS 133048 133905 . + 0 ID=cds-HJH9163636.1;Parent=gene-O5D79_002142;Dbxref=NCBI_GP:HJH9163636.1;Name=HJH9163636.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461148.1;locus_tag=O5D79_002142;product=deoxyribonuclease IV;protein_id=HJH9163636.1;transl_table=11 DALFDJ020000009.1 tpg gene 133970 135658 . - . ID=gene-O5D79_002143;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=O5D79_002143 DALFDJ020000009.1 Protein Homology CDS 133970 135658 . - 0 ID=cds-HJH9163637.1;Parent=gene-O5D79_002143;Dbxref=NCBI_GP:HJH9163637.1;Name=HJH9163637.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=O5D79_002143;product=PTS fructose transporter subunit IIBC;protein_id=HJH9163637.1;transl_table=11 DALFDJ020000009.1 tpg gene 135675 136613 . - . ID=gene-O5D79_002144;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=O5D79_002144 DALFDJ020000009.1 Protein Homology CDS 135675 136613 . - 0 ID=cds-HJH9163638.1;Parent=gene-O5D79_002144;Dbxref=NCBI_GP:HJH9163638.1;Name=HJH9163638.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461150.1;locus_tag=O5D79_002144;product=1-phosphofructokinase;protein_id=HJH9163638.1;transl_table=11 DALFDJ020000009.1 tpg gene 136613 137743 . - . ID=gene-O5D79_002145;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=O5D79_002145 DALFDJ020000009.1 Protein Homology CDS 136613 137743 . - 0 ID=cds-HJH9163639.1;Parent=gene-O5D79_002145;Dbxref=NCBI_GP:HJH9163639.1;Name=HJH9163639.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=O5D79_002145;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=HJH9163639.1;transl_table=11 DALFDJ020000009.1 tpg gene 138112 139293 . + . ID=gene-O5D79_002146;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=O5D79_002146 DALFDJ020000009.1 Protein Homology CDS 138112 139293 . + 0 ID=cds-HJH9163640.1;Parent=gene-O5D79_002146;Dbxref=NCBI_GP:HJH9163640.1;Name=HJH9163640.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461152.1;locus_tag=O5D79_002146;product=sugar efflux transporter SetB;protein_id=HJH9163640.1;transl_table=11 DALFDJ020000009.1 tpg gene 139358 140023 . - . ID=gene-O5D79_002147;Name=O5D79_002147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002147 DALFDJ020000009.1 Protein Homology CDS 139358 140023 . - 0 ID=cds-HJH9163641.1;Parent=gene-O5D79_002147;Dbxref=NCBI_GP:HJH9163641.1;Name=HJH9163641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461153.1;locus_tag=O5D79_002147;product=GNVR domain-containing protein;protein_id=HJH9163641.1;transl_table=11 DALFDJ020000009.1 tpg gene 140025 140147 . - . ID=gene-O5D79_002148;Name=O5D79_002148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002148 DALFDJ020000009.1 Protein Homology CDS 140025 140147 . - 0 ID=cds-HJH9163642.1;Parent=gene-O5D79_002148;Dbxref=NCBI_GP:HJH9163642.1;Name=HJH9163642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461154.1;locus_tag=O5D79_002148;product=hypothetical protein;protein_id=HJH9163642.1;transl_table=11 DALFDJ020000009.1 tpg gene 140535 140789 . - . ID=gene-O5D79_002149;Name=O5D79_002149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002149 DALFDJ020000009.1 Protein Homology CDS 140535 140789 . - 0 ID=cds-HJH9163643.1;Parent=gene-O5D79_002149;Dbxref=NCBI_GP:HJH9163643.1;Name=HJH9163643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675765.1;locus_tag=O5D79_002149;product=YkgJ family cysteine cluster protein;protein_id=HJH9163643.1;transl_table=11 DALFDJ020000009.1 tpg gene 141113 141685 . + . ID=gene-O5D79_002150;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=O5D79_002150 DALFDJ020000009.1 Protein Homology CDS 141113 141685 . + 0 ID=cds-HJH9163644.1;Parent=gene-O5D79_002150;Dbxref=NCBI_GP:HJH9163644.1;Name=HJH9163644.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=O5D79_002150;product=elongation factor P-like protein YeiP;protein_id=HJH9163644.1;transl_table=11 DALFDJ020000009.1 tpg gene 141896 142882 . + . ID=gene-O5D79_002151;Name=O5D79_002151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002151 DALFDJ020000009.1 Protein Homology CDS 141896 142882 . + 0 ID=cds-HJH9163645.1;Parent=gene-O5D79_002151;Dbxref=NCBI_GP:HJH9163645.1;Name=HJH9163645.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461156.1;locus_tag=O5D79_002151;product=CobW family GTP-binding protein;protein_id=HJH9163645.1;transl_table=11 DALFDJ020000009.1 tpg gene 142912 143631 . + . ID=gene-O5D79_002152;Name=O5D79_002152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002152 DALFDJ020000009.1 Protein Homology CDS 142912 143631 . + 0 ID=cds-HJH9163646.1;Parent=gene-O5D79_002152;Dbxref=NCBI_GP:HJH9163646.1;Name=HJH9163646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461157.1;locus_tag=O5D79_002152;product=phosphatase PAP2 family protein;protein_id=HJH9163646.1;transl_table=11 DALFDJ020000009.1 tpg gene 144045 144617 . + . ID=gene-O5D79_002153;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=O5D79_002153 DALFDJ020000009.1 Protein Homology CDS 144045 144617 . + 0 ID=cds-HJH9163647.1;Parent=gene-O5D79_002153;Dbxref=NCBI_GP:HJH9163647.1;Name=HJH9163647.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461158.1;locus_tag=O5D79_002153;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=HJH9163647.1;transl_table=11 DALFDJ020000009.1 tpg gene 144943 146499 . + . ID=gene-O5D79_002154;Name=O5D79_002154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002154 DALFDJ020000009.1 Protein Homology CDS 144943 146499 . + 0 ID=cds-HJH9163648.1;Parent=gene-O5D79_002154;Dbxref=NCBI_GP:HJH9163648.1;Name=HJH9163648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461159.1;locus_tag=O5D79_002154;product=cyclic di-GMP phosphodiesterase;protein_id=HJH9163648.1;transl_table=11 DALFDJ020000009.1 tpg gene 146606 148411 . + . ID=gene-O5D79_002155;Name=O5D79_002155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002155 DALFDJ020000009.1 Protein Homology CDS 146606 148411 . + 0 ID=cds-HJH9163649.1;Parent=gene-O5D79_002155;Dbxref=NCBI_GP:HJH9163649.1;Name=HJH9163649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461160.1;locus_tag=O5D79_002155;product=extracellular solute-binding protein;protein_id=HJH9163649.1;transl_table=11 DALFDJ020000009.1 tpg gene 148421 149515 . + . ID=gene-O5D79_002156;Name=O5D79_002156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002156 DALFDJ020000009.1 Protein Homology CDS 148421 149515 . + 0 ID=cds-HJH9163650.1;Parent=gene-O5D79_002156;Dbxref=NCBI_GP:HJH9163650.1;Name=HJH9163650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461161.1;locus_tag=O5D79_002156;product=microcin C ABC transporter permease YejB;protein_id=HJH9163650.1;transl_table=11 DALFDJ020000009.1 tpg gene 149515 150540 . + . ID=gene-O5D79_002157;Name=O5D79_002157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002157 DALFDJ020000009.1 Protein Homology CDS 149515 150540 . + 0 ID=cds-HJH9163651.1;Parent=gene-O5D79_002157;Dbxref=NCBI_GP:HJH9163651.1;Name=HJH9163651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461162.1;locus_tag=O5D79_002157;product=ABC transporter permease;protein_id=HJH9163651.1;transl_table=11 DALFDJ020000009.1 tpg gene 150542 152131 . + . ID=gene-O5D79_002158;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=O5D79_002158 DALFDJ020000009.1 Protein Homology CDS 150542 152131 . + 0 ID=cds-HJH9163652.1;Parent=gene-O5D79_002158;Dbxref=NCBI_GP:HJH9163652.1;Name=HJH9163652.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461163.1;locus_tag=O5D79_002158;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=HJH9163652.1;transl_table=11 DALFDJ020000009.1 tpg gene 152135 152479 . - . ID=gene-O5D79_002159;Name=O5D79_002159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002159 DALFDJ020000009.1 Protein Homology CDS 152135 152479 . - 0 ID=cds-HJH9163653.1;Parent=gene-O5D79_002159;Dbxref=NCBI_GP:HJH9163653.1;Name=HJH9163653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461164.1;locus_tag=O5D79_002159;product=YejG family protein;protein_id=HJH9163653.1;transl_table=11 DALFDJ020000009.1 tpg gene 152870 154060 . - . ID=gene-O5D79_002160;Name=O5D79_002160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002160 DALFDJ020000009.1 Protein Homology CDS 152870 154060 . - 0 ID=cds-HJH9163654.1;Parent=gene-O5D79_002160;Dbxref=NCBI_GP:HJH9163654.1;Name=HJH9163654.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461165.1;locus_tag=O5D79_002160;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=HJH9163654.1;transl_table=11 DALFDJ020000009.1 tpg gene 154088 154783 . - . ID=gene-O5D79_002161;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=O5D79_002161 DALFDJ020000009.1 Protein Homology CDS 154088 154783 . - 0 ID=cds-HJH9163655.1;Parent=gene-O5D79_002161;Dbxref=NCBI_GP:HJH9163655.1;Name=HJH9163655.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461166.1;locus_tag=O5D79_002161;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=HJH9163655.1;transl_table=11 DALFDJ020000009.1 tpg gene 154935 156695 . + . ID=gene-O5D79_002162;Name=O5D79_002162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002162 DALFDJ020000009.1 Protein Homology CDS 154935 156695 . + 0 ID=cds-HJH9163656.1;Parent=gene-O5D79_002162;Dbxref=NCBI_GP:HJH9163656.1;Name=HJH9163656.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461167.1;locus_tag=O5D79_002162;product=DEAD/DEAH box helicase;protein_id=HJH9163656.1;transl_table=11 DALFDJ020000009.1 tpg gene 156820 157104 . + . ID=gene-O5D79_002163;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=O5D79_002163 DALFDJ020000009.1 Protein Homology CDS 156820 157104 . + 0 ID=cds-HJH9163657.1;Parent=gene-O5D79_002163;Dbxref=NCBI_GP:HJH9163657.1;Name=HJH9163657.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=O5D79_002163;product=50S ribosomal protein L25;protein_id=HJH9163657.1;transl_table=11 DALFDJ020000009.1 tpg gene 157213 157833 . - . ID=gene-O5D79_002164;Name=O5D79_002164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002164 DALFDJ020000009.1 Protein Homology CDS 157213 157833 . - 0 ID=cds-HJH9163658.1;Parent=gene-O5D79_002164;Dbxref=NCBI_GP:HJH9163658.1;Name=HJH9163658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461169.1;locus_tag=O5D79_002164;product=hypothetical protein;protein_id=HJH9163658.1;transl_table=11 DALFDJ020000009.1 tpg gene 157861 158868 . - . ID=gene-O5D79_002165;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=O5D79_002165 DALFDJ020000009.1 Protein Homology CDS 157861 158868 . - 0 ID=cds-HJH9163659.1;Parent=gene-O5D79_002165;Dbxref=NCBI_GP:HJH9163659.1;Name=HJH9163659.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461170.1;locus_tag=O5D79_002165;product=nucleoid-associated protein YejK;protein_id=HJH9163659.1;transl_table=11 DALFDJ020000009.1 tpg gene 159048 159275 . + . ID=gene-O5D79_002166;Name=O5D79_002166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002166 DALFDJ020000009.1 Protein Homology CDS 159048 159275 . + 0 ID=cds-HJH9163660.1;Parent=gene-O5D79_002166;Dbxref=NCBI_GP:HJH9163660.1;Name=HJH9163660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461171.1;locus_tag=O5D79_002166;product=YejL family protein;protein_id=HJH9163660.1;transl_table=11 DALFDJ020000009.1 tpg gene 159307 161067 . + . ID=gene-O5D79_002167;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=O5D79_002167 DALFDJ020000009.1 Protein Homology CDS 159307 161067 . + 0 ID=cds-HJH9163661.1;Parent=gene-O5D79_002167;Dbxref=NCBI_GP:HJH9163661.1;Name=HJH9163661.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=O5D79_002167;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=HJH9163661.1;transl_table=11 DALFDJ020000009.1 tpg gene 161141 161217 . + . ID=gene-O5D79_002168;Name=O5D79_002168;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_002168 DALFDJ020000009.1 tRNAscan-SE tRNA 161141 161217 . + . ID=rna-O5D79_002168;Parent=gene-O5D79_002168;anticodon=(pos:161175..161177);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002168;product=tRNA-Pro DALFDJ020000009.1 tRNAscan-SE exon 161141 161217 . + . ID=exon-O5D79_002168-1;Parent=rna-O5D79_002168;anticodon=(pos:161175..161177);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002168;product=tRNA-Pro DALFDJ020000009.1 tpg pseudogene 161527 161749 . - . ID=gene-O5D79_002169;Name=O5D79_002169;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_002169;pseudo=true DALFDJ020000009.1 Protein Homology CDS 161527 161749 . - 0 ID=cds-O5D79_002169;Parent=gene-O5D79_002169;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=O5D79_002169;product=DUF4113 domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000009.1 tpg gene 161837 164203 . - . ID=gene-O5D79_002170;Name=sspH2;gbkey=Gene;gene=sspH2;gene_biotype=protein_coding;locus_tag=O5D79_002170 DALFDJ020000009.1 Protein Homology CDS 161837 164203 . - 0 ID=cds-HJH9163662.1;Parent=gene-O5D79_002170;Dbxref=NCBI_GP:HJH9163662.1;Name=HJH9163662.1;gbkey=CDS;gene=sspH2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461184.1;locus_tag=O5D79_002170;product=SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2;protein_id=HJH9163662.1;transl_table=11 DALFDJ020000009.1 tpg pseudogene 164461 164676 . + . ID=gene-O5D79_002171;Name=O5D79_002171;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_002171;pseudo=true DALFDJ020000009.1 Protein Homology CDS 164461 164676 . + 0 ID=cds-O5D79_002171;Parent=gene-O5D79_002171;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461633.1;locus_tag=O5D79_002171;product=tail fiber assembly protein;pseudo=true;transl_table=11 DALFDJ020000009.1 tpg pseudogene 164745 164879 . - . ID=gene-O5D79_002172;Name=O5D79_002172;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_002172;pseudo=true DALFDJ020000009.1 Protein Homology CDS 164745 164879 . - 0 ID=cds-O5D79_002172;Parent=gene-O5D79_002172;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014467.6;locus_tag=O5D79_002172;product=tail fiber assembly protein;pseudo=true;transl_table=11 DALFDJ020000009.1 tpg pseudogene 165501 166417 . - . ID=gene-O5D79_002173;Name=O5D79_002173;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_002173;pseudo=true DALFDJ020000009.1 Protein Homology CDS 165501 166417 . - 0 ID=cds-O5D79_002173;Parent=gene-O5D79_002173;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001144683.1;locus_tag=O5D79_002173;product=phage tail protein;pseudo=true;transl_table=11 DALFDJ020000009.1 tpg gene 166377 166535 . + . ID=gene-O5D79_002174;Name=O5D79_002174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002174 DALFDJ020000009.1 GeneMarkS-2+ CDS 166377 166535 . + 0 ID=cds-HJH9163663.1;Parent=gene-O5D79_002174;Dbxref=NCBI_GP:HJH9163663.1;Name=HJH9163663.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_002174;product=hypothetical protein;protein_id=HJH9163663.1;transl_table=11 DALFDJ020000009.1 tpg gene 166565 166753 . + . ID=gene-O5D79_002175;Name=O5D79_002175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002175 DALFDJ020000009.1 Protein Homology CDS 166565 166753 . + 0 ID=cds-HJH9163664.1;Parent=gene-O5D79_002175;Dbxref=NCBI_GP:HJH9163664.1;Name=HJH9163664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461187.1;locus_tag=O5D79_002175;product=virulence protein MsgA;protein_id=HJH9163664.1;transl_table=11 DALFDJ020000009.1 tpg gene 166946 167509 . - . ID=gene-O5D79_002176;Name=pagL;gbkey=Gene;gene=pagL;gene_biotype=protein_coding;locus_tag=O5D79_002176 DALFDJ020000009.1 Protein Homology CDS 166946 167509 . - 0 ID=cds-HJH9163665.1;Parent=gene-O5D79_002176;Dbxref=NCBI_GP:HJH9163665.1;Name=HJH9163665.1;gbkey=CDS;gene=pagL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461188.1;locus_tag=O5D79_002176;product=lipid A 3-O-deacylase PagL;protein_id=HJH9163665.1;transl_table=11 DALFDJ020000009.1 tpg gene 168328 168975 . + . ID=gene-O5D79_002177;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=O5D79_002177 DALFDJ020000009.1 Protein Homology CDS 168328 168975 . + 0 ID=cds-HJH9163666.1;Parent=gene-O5D79_002177;Dbxref=NCBI_GP:HJH9163666.1;Name=HJH9163666.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461189.1;locus_tag=O5D79_002177;product=nitrate/nitrite response regulator protein NarP;protein_id=HJH9163666.1;transl_table=11 DALFDJ020000009.1 tpg gene 169019 170062 . - . ID=gene-O5D79_002178;Name=O5D79_002178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002178 DALFDJ020000009.1 Protein Homology CDS 169019 170062 . - 0 ID=cds-HJH9163667.1;Parent=gene-O5D79_002178;Dbxref=NCBI_GP:HJH9163667.1;Name=HJH9163667.1;Ontology_term=GO:0017004,GO:0015035,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=protein-disulfide reductase activity|0015035||IEA,metal ion binding|0046872||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461190.1;locus_tag=O5D79_002178;product=cytochrome c-type biogenesis protein CcmH;protein_id=HJH9163667.1;transl_table=11 DALFDJ020000009.1 tpg gene 170059 170381 . - . ID=gene-O5D79_002179;Name=O5D79_002179;end_range=170381,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002179;partial=true DALFDJ020000009.1 Protein Homology CDS 170059 170381 . - 2 ID=cds-HJH9163668.1;Parent=gene-O5D79_002179;Dbxref=NCBI_GP:HJH9163668.1;Name=HJH9163668.1;Ontology_term=GO:0017004,GO:0015036,GO:0030288;end_range=170381,.;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461191.1;locus_tag=O5D79_002179;partial=true;product=DsbE family thiol:disulfide interchange protein;protein_id=HJH9163668.1;transl_table=11 ##sequence-region DALFDJ020000010.1 1 168763 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000010.1 tpg region 1 168763 . + . ID=DALFDJ020000010.1:1..168763;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000010.1 tpg gene 78 899 . - . ID=gene-O5D79_002180;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=O5D79_002180 DALFDJ020000010.1 Protein Homology CDS 78 899 . - 0 ID=cds-HJH9163669.1;Parent=gene-O5D79_002180;Dbxref=NCBI_GP:HJH9163669.1;Name=HJH9163669.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459069.1;locus_tag=O5D79_002180;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=HJH9163669.1;transl_table=11 DALFDJ020000010.1 tpg gene 1072 1992 . - . ID=gene-O5D79_002181;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=O5D79_002181 DALFDJ020000010.1 Protein Homology CDS 1072 1992 . - 0 ID=cds-HJH9163670.1;Parent=gene-O5D79_002181;Dbxref=NCBI_GP:HJH9163670.1;Name=HJH9163670.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459056.1;locus_tag=O5D79_002181;product=ribonucleoside hydrolase RihC;protein_id=HJH9163670.1;transl_table=11 DALFDJ020000010.1 tpg gene 2008 3210 . - . ID=gene-O5D79_002182;Name=O5D79_002182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002182 DALFDJ020000010.1 Protein Homology CDS 2008 3210 . - 0 ID=cds-HJH9163671.1;Parent=gene-O5D79_002182;Dbxref=NCBI_GP:HJH9163671.1;Name=HJH9163671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459055.1;locus_tag=O5D79_002182;product=XAC2610-related protein;protein_id=HJH9163671.1;transl_table=11 DALFDJ020000010.1 tpg gene 3410 4360 . - . ID=gene-O5D79_002183;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=O5D79_002183 DALFDJ020000010.1 Protein Homology CDS 3410 4360 . - 0 ID=cds-HJH9163672.1;Parent=gene-O5D79_002183;Dbxref=NCBI_GP:HJH9163672.1;Name=HJH9163672.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=O5D79_002183;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=HJH9163672.1;transl_table=11 DALFDJ020000010.1 tpg gene 4363 4812 . - . ID=gene-O5D79_002184;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=O5D79_002184 DALFDJ020000010.1 Protein Homology CDS 4363 4812 . - 0 ID=cds-HJH9163673.1;Parent=gene-O5D79_002184;Dbxref=NCBI_GP:HJH9163673.1;Name=HJH9163673.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459053.1;locus_tag=O5D79_002184;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=HJH9163673.1;transl_table=11 DALFDJ020000010.1 tpg gene 4967 5467 . - . ID=gene-O5D79_002185;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=O5D79_002185 DALFDJ020000010.1 Protein Homology CDS 4967 5467 . - 0 ID=cds-HJH9163674.1;Parent=gene-O5D79_002185;Dbxref=NCBI_GP:HJH9163674.1;Name=HJH9163674.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=O5D79_002185;product=signal peptidase II;protein_id=HJH9163674.1;transl_table=11 DALFDJ020000010.1 tpg gene 5467 8301 . - . ID=gene-O5D79_002186;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=O5D79_002186 DALFDJ020000010.1 Protein Homology CDS 5467 8301 . - 0 ID=cds-HJH9163675.1;Parent=gene-O5D79_002186;Dbxref=NCBI_GP:HJH9163675.1;Name=HJH9163675.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459051.1;locus_tag=O5D79_002186;product=isoleucine--tRNA ligase;protein_id=HJH9163675.1;transl_table=11 DALFDJ020000010.1 tpg gene 8346 9284 . - . ID=gene-O5D79_002187;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=O5D79_002187 DALFDJ020000010.1 Protein Homology CDS 8346 9284 . - 0 ID=cds-HJH9163676.1;Parent=gene-O5D79_002187;Dbxref=NCBI_GP:HJH9163676.1;Name=HJH9163676.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459050.1;locus_tag=O5D79_002187;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=HJH9163676.1;transl_table=11 DALFDJ020000010.1 tpg gene 9292 9507 . - . ID=gene-O5D79_002188;Name=O5D79_002188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002188 DALFDJ020000010.1 Protein Homology CDS 9292 9507 . - 0 ID=cds-HJH9163677.1;Parent=gene-O5D79_002188;Dbxref=NCBI_GP:HJH9163677.1;Name=HJH9163677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459049.1;locus_tag=O5D79_002188;product=DUF2575 family protein;protein_id=HJH9163677.1;transl_table=11 DALFDJ020000010.1 tpg gene 9613 9876 . + . ID=gene-O5D79_002189;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=O5D79_002189 DALFDJ020000010.1 Protein Homology CDS 9613 9876 . + 0 ID=cds-HJH9163678.1;Parent=gene-O5D79_002189;Dbxref=NCBI_GP:HJH9163678.1;Name=HJH9163678.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=O5D79_002189;product=30S ribosomal protein S20;protein_id=HJH9163678.1;transl_table=11 DALFDJ020000010.1 tpg gene 10332 11705 . + . ID=gene-O5D79_002190;Name=O5D79_002190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002190 DALFDJ020000010.1 Protein Homology CDS 10332 11705 . + 0 ID=cds-HJH9163679.1;Parent=gene-O5D79_002190;Dbxref=NCBI_GP:HJH9163679.1;Name=HJH9163679.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459047.1;locus_tag=O5D79_002190;product=MFS transporter;protein_id=HJH9163679.1;transl_table=11 DALFDJ020000010.1 tpg gene 11745 13784 . + . ID=gene-O5D79_002191;Name=O5D79_002191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002191 DALFDJ020000010.1 Protein Homology CDS 11745 13784 . + 0 ID=cds-HJH9163680.1;Parent=gene-O5D79_002191;Dbxref=NCBI_GP:HJH9163680.1;Name=HJH9163680.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459046.1;locus_tag=O5D79_002191;product=glycoside hydrolase family 31 protein;protein_id=HJH9163680.1;transl_table=11 DALFDJ020000010.1 tpg gene 13839 14738 . - . ID=gene-O5D79_002192;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=O5D79_002192 DALFDJ020000010.1 Protein Homology CDS 13839 14738 . - 0 ID=cds-HJH9163681.1;Parent=gene-O5D79_002192;Dbxref=NCBI_GP:HJH9163681.1;Name=HJH9163681.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459045.1;locus_tag=O5D79_002192;product=transcriptional activator NhaR;protein_id=HJH9163681.1;transl_table=11 DALFDJ020000010.1 tpg gene 14800 15966 . - . ID=gene-O5D79_002193;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=O5D79_002193 DALFDJ020000010.1 Protein Homology CDS 14800 15966 . - 0 ID=cds-HJH9163682.1;Parent=gene-O5D79_002193;Dbxref=NCBI_GP:HJH9163682.1;Name=HJH9163682.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459044.1;locus_tag=O5D79_002193;product=Na+/H+ antiporter NhaA;protein_id=HJH9163682.1;transl_table=11 DALFDJ020000010.1 tpg gene 16129 17844 . - . ID=gene-O5D79_002194;Name=O5D79_002194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002194 DALFDJ020000010.1 Protein Homology CDS 16129 17844 . - 0 ID=cds-HJH9163683.1;Parent=gene-O5D79_002194;Dbxref=NCBI_GP:HJH9163683.1;Name=HJH9163683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459043.1;locus_tag=O5D79_002194;product=aryl-sulfate sulfotransferase;protein_id=HJH9163683.1;transl_table=11 DALFDJ020000010.1 tpg gene 17971 19224 . - . ID=gene-O5D79_002195;Name=O5D79_002195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002195 DALFDJ020000010.1 Protein Homology CDS 17971 19224 . - 0 ID=cds-HJH9163684.1;Parent=gene-O5D79_002195;Dbxref=NCBI_GP:HJH9163684.1;Name=HJH9163684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459042.1;locus_tag=O5D79_002195;product=IS1/IS1595 family N-terminal zinc-binding domain-containing protein;protein_id=HJH9163684.1;transl_table=11 DALFDJ020000010.1 tpg gene 19243 20433 . - . ID=gene-O5D79_002196;Name=O5D79_002196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002196 DALFDJ020000010.1 Protein Homology CDS 19243 20433 . - 0 ID=cds-HJH9163685.1;Parent=gene-O5D79_002196;Dbxref=NCBI_GP:HJH9163685.1;Name=HJH9163685.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459041.1;locus_tag=O5D79_002196;product=anaerobic sulfatase maturase;protein_id=HJH9163685.1;transl_table=11 DALFDJ020000010.1 tpg gene 20532 22025 . - . ID=gene-O5D79_002197;Name=O5D79_002197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002197 DALFDJ020000010.1 Protein Homology CDS 20532 22025 . - 0 ID=cds-HJH9163686.1;Parent=gene-O5D79_002197;Dbxref=NCBI_GP:HJH9163686.1;Name=HJH9163686.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459040.1;locus_tag=O5D79_002197;product=sulfatase family protein;protein_id=HJH9163686.1;transl_table=11 DALFDJ020000010.1 tpg gene 22620 23381 . + . ID=gene-O5D79_002198;Name=O5D79_002198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002198 DALFDJ020000010.1 Protein Homology CDS 22620 23381 . + 0 ID=cds-HJH9163687.1;Parent=gene-O5D79_002198;Dbxref=NCBI_GP:HJH9163687.1;Name=HJH9163687.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459039.1;locus_tag=O5D79_002198;product=outer membrane protein OmpK;protein_id=HJH9163687.1;transl_table=11 DALFDJ020000010.1 tpg gene 23480 25051 . + . ID=gene-O5D79_002199;Name=O5D79_002199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002199 DALFDJ020000010.1 Protein Homology CDS 23480 25051 . + 0 ID=cds-HJH9163688.1;Parent=gene-O5D79_002199;Dbxref=NCBI_GP:HJH9163688.1;Name=HJH9163688.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459038.1;locus_tag=O5D79_002199;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=HJH9163688.1;transl_table=11 DALFDJ020000010.1 tpg gene 25097 26815 . - . ID=gene-O5D79_002200;Name=O5D79_002200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002200 DALFDJ020000010.1 Protein Homology CDS 25097 26815 . - 0 ID=cds-HJH9163689.1;Parent=gene-O5D79_002200;Dbxref=NCBI_GP:HJH9163689.1;Name=HJH9163689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459037.1;locus_tag=O5D79_002200;product=aryl-sulfate sulfotransferase;protein_id=HJH9163689.1;transl_table=11 DALFDJ020000010.1 tpg gene 27338 27775 . + . ID=gene-O5D79_002201;Name=O5D79_002201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002201 DALFDJ020000010.1 Protein Homology CDS 27338 27775 . + 0 ID=cds-HJH9163690.1;Parent=gene-O5D79_002201;Dbxref=NCBI_GP:HJH9163690.1;Name=HJH9163690.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459036.1;locus_tag=O5D79_002201;product=winged helix-turn-helix domain-containing protein;protein_id=HJH9163690.1;transl_table=11 DALFDJ020000010.1 tpg gene 27783 28787 . - . ID=gene-O5D79_002202;Name=O5D79_002202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002202 DALFDJ020000010.1 Protein Homology CDS 27783 28787 . - 0 ID=cds-HJH9163691.1;Parent=gene-O5D79_002202;Dbxref=NCBI_GP:HJH9163691.1;Name=HJH9163691.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459035.1;locus_tag=O5D79_002202;product=LysR family transcriptional regulator;protein_id=HJH9163691.1;transl_table=11 DALFDJ020000010.1 tpg gene 29157 29606 . + . ID=gene-O5D79_002203;Name=O5D79_002203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002203 DALFDJ020000010.1 Protein Homology CDS 29157 29606 . + 0 ID=cds-HJH9163692.1;Parent=gene-O5D79_002203;Dbxref=NCBI_GP:HJH9163692.1;Name=HJH9163692.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459034.1;locus_tag=O5D79_002203;product=winged helix-turn-helix domain-containing protein;protein_id=HJH9163692.1;transl_table=11 DALFDJ020000010.1 tpg gene 29706 29993 . - . ID=gene-O5D79_002204;Name=O5D79_002204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002204 DALFDJ020000010.1 Protein Homology CDS 29706 29993 . - 0 ID=cds-HJH9163693.1;Parent=gene-O5D79_002204;Dbxref=NCBI_GP:HJH9163693.1;Name=HJH9163693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000839835.1;locus_tag=O5D79_002204;product=hypothetical protein;protein_id=HJH9163693.1;transl_table=11 DALFDJ020000010.1 tpg gene 30032 30877 . - . ID=gene-O5D79_002205;Name=O5D79_002205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002205 DALFDJ020000010.1 Protein Homology CDS 30032 30877 . - 0 ID=cds-HJH9163694.1;Parent=gene-O5D79_002205;Dbxref=NCBI_GP:HJH9163694.1;Name=HJH9163694.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459033.1;locus_tag=O5D79_002205;product=DsbA family protein;protein_id=HJH9163694.1;transl_table=11 DALFDJ020000010.1 tpg gene 30942 31673 . - . ID=gene-O5D79_002206;Name=bcfG;gbkey=Gene;gene=bcfG;gene_biotype=protein_coding;locus_tag=O5D79_002206 DALFDJ020000010.1 Protein Homology CDS 30942 31673 . - 0 ID=cds-HJH9163695.1;Parent=gene-O5D79_002206;Dbxref=NCBI_GP:HJH9163695.1;Name=HJH9163695.1;gbkey=CDS;gene=bcfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459032.1;locus_tag=O5D79_002206;product=fimbrial chaperone BcfG;protein_id=HJH9163695.1;transl_table=11 DALFDJ020000010.1 tpg gene 31639 32157 . - . ID=gene-O5D79_002207;Name=O5D79_002207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002207 DALFDJ020000010.1 Protein Homology CDS 31639 32157 . - 0 ID=cds-HJH9163696.1;Parent=gene-O5D79_002207;Dbxref=NCBI_GP:HJH9163696.1;Name=HJH9163696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459031.1;locus_tag=O5D79_002207;product=fimbrial protein BcfF;protein_id=HJH9163696.1;transl_table=11 DALFDJ020000010.1 tpg gene 32173 32718 . - . ID=gene-O5D79_002208;Name=O5D79_002208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002208 DALFDJ020000010.1 Protein Homology CDS 32173 32718 . - 0 ID=cds-HJH9163697.1;Parent=gene-O5D79_002208;Dbxref=NCBI_GP:HJH9163697.1;Name=HJH9163697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459030.1;locus_tag=O5D79_002208;product=fimbrial protein BcfE;protein_id=HJH9163697.1;transl_table=11 DALFDJ020000010.1 tpg gene 32719 33726 . - . ID=gene-O5D79_002209;Name=O5D79_002209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002209 DALFDJ020000010.1 Protein Homology CDS 32719 33726 . - 0 ID=cds-HJH9163698.1;Parent=gene-O5D79_002209;Dbxref=NCBI_GP:HJH9163698.1;Name=HJH9163698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459029.1;locus_tag=O5D79_002209;product=fimbrial protein BcfD;protein_id=HJH9163698.1;transl_table=11 DALFDJ020000010.1 tpg gene 33727 36348 . - . ID=gene-O5D79_002210;Name=bcfC;gbkey=Gene;gene=bcfC;gene_biotype=protein_coding;locus_tag=O5D79_002210 DALFDJ020000010.1 Protein Homology CDS 33727 36348 . - 0 ID=cds-HJH9163699.1;Parent=gene-O5D79_002210;Dbxref=NCBI_GP:HJH9163699.1;Name=HJH9163699.1;gbkey=CDS;gene=bcfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459028.1;locus_tag=O5D79_002210;product=fimbrial usher BcfC;protein_id=HJH9163699.1;transl_table=11 DALFDJ020000010.1 tpg gene 36353 37039 . - . ID=gene-O5D79_002211;Name=bcfB;gbkey=Gene;gene=bcfB;gene_biotype=protein_coding;locus_tag=O5D79_002211 DALFDJ020000010.1 Protein Homology CDS 36353 37039 . - 0 ID=cds-HJH9163700.1;Parent=gene-O5D79_002211;Dbxref=NCBI_GP:HJH9163700.1;Name=HJH9163700.1;gbkey=CDS;gene=bcfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459027.1;locus_tag=O5D79_002211;product=fimbrial biogenesis chaperone BcfB;protein_id=HJH9163700.1;transl_table=11 DALFDJ020000010.1 tpg gene 37140 37682 . - . ID=gene-O5D79_002212;Name=O5D79_002212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002212 DALFDJ020000010.1 Protein Homology CDS 37140 37682 . - 0 ID=cds-HJH9163701.1;Parent=gene-O5D79_002212;Dbxref=NCBI_GP:HJH9163701.1;Name=HJH9163701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459026.1;locus_tag=O5D79_002212;product=fimbrial protein BcfA;protein_id=HJH9163701.1;transl_table=11 DALFDJ020000010.1 tpg gene 38112 38807 . - . ID=gene-O5D79_002213;Name=O5D79_002213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002213 DALFDJ020000010.1 Protein Homology CDS 38112 38807 . - 0 ID=cds-HJH9163702.1;Parent=gene-O5D79_002213;Dbxref=NCBI_GP:HJH9163702.1;Name=HJH9163702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527260.1;locus_tag=O5D79_002213;product=helix-turn-helix domain-containing protein;protein_id=HJH9163702.1;transl_table=11 DALFDJ020000010.1 tpg gene 39098 42094 . - . ID=gene-O5D79_002214;Name=O5D79_002214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002214 DALFDJ020000010.1 Protein Homology CDS 39098 42094 . - 0 ID=cds-HJH9163703.1;Parent=gene-O5D79_002214;Dbxref=NCBI_GP:HJH9163703.1;Name=HJH9163703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459024.1;locus_tag=O5D79_002214;product=chitinase;protein_id=HJH9163703.1;transl_table=11 DALFDJ020000010.1 tpg gene 42187 44292 . - . ID=gene-O5D79_002215;Name=O5D79_002215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002215 DALFDJ020000010.1 Protein Homology CDS 42187 44292 . - 0 ID=cds-HJH9163704.1;Parent=gene-O5D79_002215;Dbxref=NCBI_GP:HJH9163704.1;Name=HJH9163704.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459023.1;locus_tag=O5D79_002215;product=glycosyl hydrolase family 18 protein;protein_id=HJH9163704.1;transl_table=11 DALFDJ020000010.1 tpg gene 44673 45116 . + . ID=gene-O5D79_002216;Name=O5D79_002216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002216 DALFDJ020000010.1 Protein Homology CDS 44673 45116 . + 0 ID=cds-HJH9163705.1;Parent=gene-O5D79_002216;Dbxref=NCBI_GP:HJH9163705.1;Name=HJH9163705.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459022.1;locus_tag=O5D79_002216;product=winged helix-turn-helix domain-containing protein;protein_id=HJH9163705.1;transl_table=11 DALFDJ020000010.1 tpg gene 45133 45666 . + . ID=gene-O5D79_002217;Name=O5D79_002217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002217 DALFDJ020000010.1 Protein Homology CDS 45133 45666 . + 0 ID=cds-HJH9163706.1;Parent=gene-O5D79_002217;Dbxref=NCBI_GP:HJH9163706.1;Name=HJH9163706.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459021.1;locus_tag=O5D79_002217;product=glycoside hydrolase family 108 protein;protein_id=HJH9163706.1;transl_table=11 DALFDJ020000010.1 tpg gene 45727 46071 . - . ID=gene-O5D79_002218;Name=O5D79_002218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002218 DALFDJ020000010.1 Protein Homology CDS 45727 46071 . - 0 ID=cds-HJH9163707.1;Parent=gene-O5D79_002218;Dbxref=NCBI_GP:HJH9163707.1;Name=HJH9163707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459020.1;locus_tag=O5D79_002218;product=phage holin family protein;protein_id=HJH9163707.1;transl_table=11 DALFDJ020000010.1 tpg gene 46198 47145 . - . ID=gene-O5D79_002219;Name=O5D79_002219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002219 DALFDJ020000010.1 Protein Homology CDS 46198 47145 . - 0 ID=cds-HJH9163708.1;Parent=gene-O5D79_002219;Dbxref=NCBI_GP:HJH9163708.1;Name=HJH9163708.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459019.1;locus_tag=O5D79_002219;product=LysR family transcriptional regulator;protein_id=HJH9163708.1;transl_table=11 DALFDJ020000010.1 tpg gene 47426 48565 . - . ID=gene-O5D79_002220;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=O5D79_002220 DALFDJ020000010.1 Protein Homology CDS 47426 48565 . - 0 ID=cds-HJH9163709.1;Parent=gene-O5D79_002220;Dbxref=NCBI_GP:HJH9163709.1;Name=HJH9163709.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459018.1;locus_tag=O5D79_002220;product=molecular chaperone DnaJ;protein_id=HJH9163709.1;transl_table=11 DALFDJ020000010.1 tpg gene 48651 50567 . - . ID=gene-O5D79_002221;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=O5D79_002221 DALFDJ020000010.1 Protein Homology CDS 48651 50567 . - 0 ID=cds-HJH9163710.1;Parent=gene-O5D79_002221;Dbxref=NCBI_GP:HJH9163710.1;Name=HJH9163710.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=O5D79_002221;product=molecular chaperone DnaK;protein_id=HJH9163710.1;transl_table=11 DALFDJ020000010.1 tpg gene 50916 51320 . + . ID=gene-O5D79_002222;Name=O5D79_002222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002222 DALFDJ020000010.1 Protein Homology CDS 50916 51320 . + 0 ID=cds-HJH9163711.1;Parent=gene-O5D79_002222;Dbxref=NCBI_GP:HJH9163711.1;Name=HJH9163711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459016.1;locus_tag=O5D79_002222;product=DUF2541 family protein;protein_id=HJH9163711.1;transl_table=11 DALFDJ020000010.1 tpg gene 51356 52069 . + . ID=gene-O5D79_002223;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=O5D79_002223 DALFDJ020000010.1 Protein Homology CDS 51356 52069 . + 0 ID=cds-HJH9163712.1;Parent=gene-O5D79_002223;Dbxref=NCBI_GP:HJH9163712.1;Name=HJH9163712.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459015.1;locus_tag=O5D79_002223;product=acidic protein MsyB;protein_id=HJH9163712.1;transl_table=11 DALFDJ020000010.1 tpg gene 52219 52785 . + . ID=gene-O5D79_002224;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=O5D79_002224 DALFDJ020000010.1 Protein Homology CDS 52219 52785 . + 0 ID=cds-HJH9163713.1;Parent=gene-O5D79_002224;Dbxref=NCBI_GP:HJH9163713.1;Name=HJH9163713.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459014.1;locus_tag=O5D79_002224;product=acetate uptake transporter;protein_id=HJH9163713.1;transl_table=11 DALFDJ020000010.1 tpg gene 52842 53432 . - . ID=gene-O5D79_002225;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=O5D79_002225 DALFDJ020000010.1 Protein Homology CDS 52842 53432 . - 0 ID=cds-HJH9163714.1;Parent=gene-O5D79_002225;Dbxref=NCBI_GP:HJH9163714.1;Name=HJH9163714.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000380375.1;locus_tag=O5D79_002225;product=molybdopterin adenylyltransferase;protein_id=HJH9163714.1;transl_table=11 DALFDJ020000010.1 tpg gene 53543 54496 . - . ID=gene-O5D79_002226;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=O5D79_002226 DALFDJ020000010.1 Protein Homology CDS 53543 54496 . - 0 ID=cds-HJH9163715.1;Parent=gene-O5D79_002226;Dbxref=NCBI_GP:HJH9163715.1;Name=HJH9163715.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459012.1;locus_tag=O5D79_002226;product=transaldolase;protein_id=HJH9163715.1;transl_table=11 DALFDJ020000010.1 tpg gene 54765 56195 . + . ID=gene-O5D79_002227;Name=O5D79_002227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002227 DALFDJ020000010.1 Protein Homology CDS 54765 56195 . + 0 ID=cds-HJH9163716.1;Parent=gene-O5D79_002227;Dbxref=NCBI_GP:HJH9163716.1;Name=HJH9163716.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459011.1;locus_tag=O5D79_002227;product=alanine/glycine:cation symporter family protein;protein_id=HJH9163716.1;transl_table=11 DALFDJ020000010.1 tpg gene 56274 57047 . + . ID=gene-O5D79_002228;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=O5D79_002228 DALFDJ020000010.1 Protein Homology CDS 56274 57047 . + 0 ID=cds-HJH9163717.1;Parent=gene-O5D79_002228;Dbxref=NCBI_GP:HJH9163717.1;Name=HJH9163717.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459010.1;locus_tag=O5D79_002228;product=peroxide stress protein YaaA;protein_id=HJH9163717.1;transl_table=11 DALFDJ020000010.1 tpg gene 57141 58427 . - . ID=gene-O5D79_002229;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=O5D79_002229 DALFDJ020000010.1 Protein Homology CDS 57141 58427 . - 0 ID=cds-HJH9163718.1;Parent=gene-O5D79_002229;Dbxref=NCBI_GP:HJH9163718.1;Name=HJH9163718.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459009.1;locus_tag=O5D79_002229;product=threonine synthase;protein_id=HJH9163718.1;transl_table=11 DALFDJ020000010.1 tpg gene 58431 59360 . - . ID=gene-O5D79_002230;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=O5D79_002230 DALFDJ020000010.1 Protein Homology CDS 58431 59360 . - 0 ID=cds-HJH9163719.1;Parent=gene-O5D79_002230;Dbxref=NCBI_GP:HJH9163719.1;Name=HJH9163719.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459008.1;locus_tag=O5D79_002230;product=homoserine kinase;protein_id=HJH9163719.1;transl_table=11 DALFDJ020000010.1 tpg gene 59362 61824 . - . ID=gene-O5D79_002231;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=O5D79_002231 DALFDJ020000010.1 Protein Homology CDS 59362 61824 . - 0 ID=cds-HJH9163720.1;Parent=gene-O5D79_002231;Dbxref=NCBI_GP:HJH9163720.1;Name=HJH9163720.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=O5D79_002231;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=HJH9163720.1;transl_table=11 DALFDJ020000010.1 cmsearch sequence_feature 61850 61970 . - . ID=id-DALFDJ020000010.1:61850..61970;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 DALFDJ020000010.1 tpg gene 61906 61971 . - . ID=gene-O5D79_002232;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=O5D79_002232 DALFDJ020000010.1 Protein Homology CDS 61906 61971 . - 0 ID=cds-HJH9163721.1;Parent=gene-O5D79_002232;Dbxref=NCBI_GP:HJH9163721.1;Name=HJH9163721.1;Ontology_term=GO:0009088,GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=threonine biosynthetic process|0009088||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459006.1;locus_tag=O5D79_002232;product=thr operon leader peptide;protein_id=HJH9163721.1;transl_table=11 DALFDJ020000010.1 tpg gene 62185 62871 . - . ID=gene-O5D79_002233;Name=O5D79_002233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002233 DALFDJ020000010.1 Protein Homology CDS 62185 62871 . - 0 ID=cds-HJH9163722.1;Parent=gene-O5D79_002233;Dbxref=NCBI_GP:HJH9163722.1;Name=HJH9163722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463456.1;locus_tag=O5D79_002233;product=tRNA/rRNA methyltransferase;protein_id=HJH9163722.1;transl_table=11 DALFDJ020000010.1 tpg gene 63271 63411 . - . ID=gene-O5D79_002234;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=O5D79_002234 DALFDJ020000010.1 Protein Homology CDS 63271 63411 . - 0 ID=cds-HJH9163723.1;Parent=gene-O5D79_002234;Dbxref=NCBI_GP:HJH9163723.1;Name=HJH9163723.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=O5D79_002234;product=protein YjjY;protein_id=HJH9163723.1;transl_table=11 DALFDJ020000010.1 tpg gene 63507 64223 . + . ID=gene-O5D79_002235;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=O5D79_002235 DALFDJ020000010.1 Protein Homology CDS 63507 64223 . + 0 ID=cds-HJH9163724.1;Parent=gene-O5D79_002235;Dbxref=NCBI_GP:HJH9163724.1;Name=HJH9163724.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=O5D79_002235;product=two-component system response regulator ArcA;protein_id=HJH9163724.1;transl_table=11 DALFDJ020000010.1 tpg gene 64490 64804 . + . ID=gene-O5D79_002236;Name=O5D79_002236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002236 DALFDJ020000010.1 Protein Homology CDS 64490 64804 . + 0 ID=cds-HJH9163725.1;Parent=gene-O5D79_002236;Dbxref=NCBI_GP:HJH9163725.1;Name=HJH9163725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463453.1;locus_tag=O5D79_002236;product=hypothetical protein;protein_id=HJH9163725.1;transl_table=11 DALFDJ020000010.1 tpg gene 65187 65858 . + . ID=gene-O5D79_002237;Name=O5D79_002237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002237 DALFDJ020000010.1 Protein Homology CDS 65187 65858 . + 0 ID=cds-HJH9163726.1;Parent=gene-O5D79_002237;Dbxref=NCBI_GP:HJH9163726.1;Name=HJH9163726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463452.1;locus_tag=O5D79_002237;product=helix-turn-helix domain-containing protein;protein_id=HJH9163726.1;transl_table=11 DALFDJ020000010.1 tpg gene 66197 66742 . + . ID=gene-O5D79_002238;Name=O5D79_002238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002238 DALFDJ020000010.1 Protein Homology CDS 66197 66742 . + 0 ID=cds-HJH9163727.1;Parent=gene-O5D79_002238;Dbxref=NCBI_GP:HJH9163727.1;Name=HJH9163727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463451.1;locus_tag=O5D79_002238;product=fimbrial protein;protein_id=HJH9163727.1;transl_table=11 DALFDJ020000010.1 tpg gene 66813 67496 . + . ID=gene-O5D79_002239;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=O5D79_002239 DALFDJ020000010.1 Protein Homology CDS 66813 67496 . + 0 ID=cds-HJH9163728.1;Parent=gene-O5D79_002239;Dbxref=NCBI_GP:HJH9163728.1;Name=HJH9163728.1;gbkey=CDS;gene=sthA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463450.1;locus_tag=O5D79_002239;product=fimbrial biogenesis chaperone SthA;protein_id=HJH9163728.1;transl_table=11 DALFDJ020000010.1 tpg gene 67542 70079 . + . ID=gene-O5D79_002240;Name=O5D79_002240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002240 DALFDJ020000010.1 Protein Homology CDS 67542 70079 . + 0 ID=cds-HJH9163729.1;Parent=gene-O5D79_002240;Dbxref=NCBI_GP:HJH9163729.1;Name=HJH9163729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463449.1;locus_tag=O5D79_002240;product=fimbrial outer membrane usher protein;protein_id=HJH9163729.1;transl_table=11 DALFDJ020000010.1 tpg gene 70097 70654 . + . ID=gene-O5D79_002241;Name=O5D79_002241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002241 DALFDJ020000010.1 Protein Homology CDS 70097 70654 . + 0 ID=cds-HJH9163730.1;Parent=gene-O5D79_002241;Dbxref=NCBI_GP:HJH9163730.1;Name=HJH9163730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463448.1;locus_tag=O5D79_002241;product=fimbrial protein;protein_id=HJH9163730.1;transl_table=11 DALFDJ020000010.1 tpg gene 70695 71780 . + . ID=gene-O5D79_002242;Name=sthE;gbkey=Gene;gene=sthE;gene_biotype=protein_coding;locus_tag=O5D79_002242 DALFDJ020000010.1 Protein Homology CDS 70695 71780 . + 0 ID=cds-HJH9163731.1;Parent=gene-O5D79_002242;Dbxref=NCBI_GP:HJH9163731.1;Name=HJH9163731.1;gbkey=CDS;gene=sthE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463447.1;locus_tag=O5D79_002242;product=fimbrial major subunit SthE;protein_id=HJH9163731.1;transl_table=11 DALFDJ020000010.1 tpg gene 71838 73187 . - . ID=gene-O5D79_002243;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=O5D79_002243 DALFDJ020000010.1 Protein Homology CDS 71838 73187 . - 0 ID=cds-HJH9163732.1;Parent=gene-O5D79_002243;Dbxref=NCBI_GP:HJH9163732.1;Name=HJH9163732.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463446.1;locus_tag=O5D79_002243;product=cell envelope integrity protein CreD;protein_id=HJH9163732.1;transl_table=11 DALFDJ020000010.1 tpg gene 73245 74669 . - . ID=gene-O5D79_002244;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=O5D79_002244 DALFDJ020000010.1 Protein Homology CDS 73245 74669 . - 0 ID=cds-HJH9163733.1;Parent=gene-O5D79_002244;Dbxref=NCBI_GP:HJH9163733.1;Name=HJH9163733.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463445.1;locus_tag=O5D79_002244;product=two-component system sensor histidine kinase CreC;protein_id=HJH9163733.1;transl_table=11 DALFDJ020000010.1 tpg gene 74669 75358 . - . ID=gene-O5D79_002245;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=O5D79_002245 DALFDJ020000010.1 Protein Homology CDS 74669 75358 . - 0 ID=cds-HJH9163734.1;Parent=gene-O5D79_002245;Dbxref=NCBI_GP:HJH9163734.1;Name=HJH9163734.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463444.1;locus_tag=O5D79_002245;product=two-component system response regulator CreB;protein_id=HJH9163734.1;transl_table=11 DALFDJ020000010.1 tpg gene 75371 75844 . - . ID=gene-O5D79_002246;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=O5D79_002246 DALFDJ020000010.1 Protein Homology CDS 75371 75844 . - 0 ID=cds-HJH9163735.1;Parent=gene-O5D79_002246;Dbxref=NCBI_GP:HJH9163735.1;Name=HJH9163735.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463443.1;locus_tag=O5D79_002246;product=protein CreA;protein_id=HJH9163735.1;transl_table=11 DALFDJ020000010.1 tpg gene 76056 76925 . + . ID=gene-O5D79_002247;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=O5D79_002247 DALFDJ020000010.1 Protein Homology CDS 76056 76925 . + 0 ID=cds-HJH9163736.1;Parent=gene-O5D79_002247;Dbxref=NCBI_GP:HJH9163736.1;Name=HJH9163736.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463442.1;locus_tag=O5D79_002247;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=HJH9163736.1;transl_table=11 DALFDJ020000010.1 tpg gene 76922 77569 . - . ID=gene-O5D79_002248;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=O5D79_002248 DALFDJ020000010.1 Protein Homology CDS 76922 77569 . - 0 ID=cds-HJH9163737.1;Parent=gene-O5D79_002248;Dbxref=NCBI_GP:HJH9163737.1;Name=HJH9163737.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=O5D79_002248;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=HJH9163737.1;transl_table=11 DALFDJ020000010.1 tpg gene 77618 78133 . + . ID=gene-O5D79_002249;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=O5D79_002249 DALFDJ020000010.1 Protein Homology CDS 77618 78133 . + 0 ID=cds-HJH9163738.1;Parent=gene-O5D79_002249;Dbxref=NCBI_GP:HJH9163738.1;Name=HJH9163738.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463440.1;locus_tag=O5D79_002249;product=inosine/xanthosine triphosphatase;protein_id=HJH9163738.1;transl_table=11 DALFDJ020000010.1 tpg gene 78235 78561 . - . ID=gene-O5D79_002250;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=O5D79_002250 DALFDJ020000010.1 Protein Homology CDS 78235 78561 . - 0 ID=cds-HJH9163739.1;Parent=gene-O5D79_002250;Dbxref=NCBI_GP:HJH9163739.1;Name=HJH9163739.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463439.1;locus_tag=O5D79_002250;product=trp operon repressor;protein_id=HJH9163739.1;transl_table=11 DALFDJ020000010.1 tpg gene 78619 80556 . - . ID=gene-O5D79_002251;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=O5D79_002251 DALFDJ020000010.1 Protein Homology CDS 78619 80556 . - 0 ID=cds-HJH9163740.1;Parent=gene-O5D79_002251;Dbxref=NCBI_GP:HJH9163740.1;Name=HJH9163740.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155637.1;locus_tag=O5D79_002251;product=murein transglycosylase;protein_id=HJH9163740.1;transl_table=11 DALFDJ020000010.1 tpg gene 80765 82432 . + . ID=gene-O5D79_002252;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=O5D79_002252 DALFDJ020000010.1 Protein Homology CDS 80765 82432 . + 0 ID=cds-HJH9163741.1;Parent=gene-O5D79_002252;Dbxref=NCBI_GP:HJH9163741.1;Name=HJH9163741.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=O5D79_002252;product=energy-dependent translational throttle protein EttA;protein_id=HJH9163741.1;transl_table=11 DALFDJ020000010.1 tpg gene 82550 83782 . - . ID=gene-O5D79_002253;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=O5D79_002253 DALFDJ020000010.1 Protein Homology CDS 82550 83782 . - 0 ID=cds-HJH9163742.1;Parent=gene-O5D79_002253;Dbxref=NCBI_GP:HJH9163742.1;Name=HJH9163742.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=O5D79_002253;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=HJH9163742.1;transl_table=11 DALFDJ020000010.1 tpg gene 83933 85315 . - . ID=gene-O5D79_002254;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=O5D79_002254 DALFDJ020000010.1 Protein Homology CDS 83933 85315 . - 0 ID=cds-HJH9163743.1;Parent=gene-O5D79_002254;Dbxref=NCBI_GP:HJH9163743.1;Name=HJH9163743.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=O5D79_002254;product=DNA repair protein RadA;protein_id=HJH9163743.1;transl_table=11 DALFDJ020000010.1 tpg gene 85399 86367 . - . ID=gene-O5D79_002255;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=O5D79_002255 DALFDJ020000010.1 Protein Homology CDS 85399 86367 . - 0 ID=cds-HJH9163744.1;Parent=gene-O5D79_002255;Dbxref=NCBI_GP:HJH9163744.1;Name=HJH9163744.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463434.1;locus_tag=O5D79_002255;product=phosphoserine phosphatase;protein_id=HJH9163744.1;transl_table=11 DALFDJ020000010.1 tpg gene 86484 87128 . + . ID=gene-O5D79_002256;Name=O5D79_002256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002256 DALFDJ020000010.1 Protein Homology CDS 86484 87128 . + 0 ID=cds-HJH9163745.1;Parent=gene-O5D79_002256;Dbxref=NCBI_GP:HJH9163745.1;Name=HJH9163745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463433.2;locus_tag=O5D79_002256;product=YtjB family periplasmic protein;protein_id=HJH9163745.1;transl_table=11 DALFDJ020000010.1 tpg gene 87162 88178 . + . ID=gene-O5D79_002257;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=O5D79_002257 DALFDJ020000010.1 Protein Homology CDS 87162 88178 . + 0 ID=cds-HJH9163746.1;Parent=gene-O5D79_002257;Dbxref=NCBI_GP:HJH9163746.1;Name=HJH9163746.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463432.1;locus_tag=O5D79_002257;product=lipoate--protein ligase LplA;protein_id=HJH9163746.1;transl_table=11 DALFDJ020000010.1 tpg gene 88183 89511 . - . ID=gene-O5D79_002258;Name=yjjJ;gbkey=Gene;gene=yjjJ;gene_biotype=protein_coding;locus_tag=O5D79_002258 DALFDJ020000010.1 Protein Homology CDS 88183 89511 . - 0 ID=cds-HJH9163747.1;Parent=gene-O5D79_002258;Dbxref=NCBI_GP:HJH9163747.1;Name=HJH9163747.1;gbkey=CDS;gene=yjjJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747246.1;locus_tag=O5D79_002258;product=type II toxin-antitoxin system HipA family toxin YjjJ;protein_id=HJH9163747.1;transl_table=11 DALFDJ020000010.1 tpg gene 89690 90409 . - . ID=gene-O5D79_002259;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=O5D79_002259 DALFDJ020000010.1 Protein Homology CDS 89690 90409 . - 0 ID=cds-HJH9163748.1;Parent=gene-O5D79_002259;Dbxref=NCBI_GP:HJH9163748.1;Name=HJH9163748.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463426.1;locus_tag=O5D79_002259;product=purine-nucleoside phosphorylase;protein_id=HJH9163748.1;transl_table=11 DALFDJ020000010.1 tpg gene 90522 91745 . - . ID=gene-O5D79_002260;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=O5D79_002260 DALFDJ020000010.1 Protein Homology CDS 90522 91745 . - 0 ID=cds-HJH9163749.1;Parent=gene-O5D79_002260;Dbxref=NCBI_GP:HJH9163749.1;Name=HJH9163749.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463425.1;locus_tag=O5D79_002260;product=phosphopentomutase;protein_id=HJH9163749.1;transl_table=11 DALFDJ020000010.1 tpg gene 91797 93119 . - . ID=gene-O5D79_002261;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=O5D79_002261 DALFDJ020000010.1 Protein Homology CDS 91797 93119 . - 0 ID=cds-HJH9163750.1;Parent=gene-O5D79_002261;Dbxref=NCBI_GP:HJH9163750.1;Name=HJH9163750.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=O5D79_002261;product=thymidine phosphorylase;protein_id=HJH9163750.1;transl_table=11 DALFDJ020000010.1 tpg gene 93243 94022 . - . ID=gene-O5D79_002262;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=O5D79_002262 DALFDJ020000010.1 Protein Homology CDS 93243 94022 . - 0 ID=cds-HJH9163751.1;Parent=gene-O5D79_002262;Dbxref=NCBI_GP:HJH9163751.1;Name=HJH9163751.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=O5D79_002262;product=deoxyribose-phosphate aldolase;protein_id=HJH9163751.1;transl_table=11 DALFDJ020000010.1 tpg gene 94282 95832 . + . ID=gene-O5D79_002263;Name=O5D79_002263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002263 DALFDJ020000010.1 Protein Homology CDS 94282 95832 . + 0 ID=cds-HJH9163752.1;Parent=gene-O5D79_002263;Dbxref=NCBI_GP:HJH9163752.1;Name=HJH9163752.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463422.1;locus_tag=O5D79_002263;product=YjjI family glycine radical enzyme;protein_id=HJH9163752.1;transl_table=11 DALFDJ020000010.1 tpg gene 95804 96667 . + . ID=gene-O5D79_002264;Name=O5D79_002264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002264 DALFDJ020000010.1 Protein Homology CDS 95804 96667 . + 0 ID=cds-HJH9163753.1;Parent=gene-O5D79_002264;Dbxref=NCBI_GP:HJH9163753.1;Name=HJH9163753.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463421.1;locus_tag=O5D79_002264;product=YjjW family glycine radical enzyme activase;protein_id=HJH9163753.1;transl_table=11 DALFDJ020000010.1 tpg gene 96700 97473 . - . ID=gene-O5D79_002265;Name=O5D79_002265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002265 DALFDJ020000010.1 Protein Homology CDS 96700 97473 . - 0 ID=cds-HJH9163754.1;Parent=gene-O5D79_002265;Dbxref=NCBI_GP:HJH9163754.1;Name=HJH9163754.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463420.1;locus_tag=O5D79_002265;product=metal-dependent hydrolase;protein_id=HJH9163754.1;transl_table=11 DALFDJ020000010.1 tpg gene 97470 98543 . - . ID=gene-O5D79_002266;Name=O5D79_002266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002266 DALFDJ020000010.1 Protein Homology CDS 97470 98543 . - 0 ID=cds-HJH9163755.1;Parent=gene-O5D79_002266;Dbxref=NCBI_GP:HJH9163755.1;Name=HJH9163755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=O5D79_002266;product=patatin-like phospholipase family protein;protein_id=HJH9163755.1;transl_table=11 DALFDJ020000010.1 tpg gene 98667 98828 . - . ID=gene-O5D79_002267;Name=O5D79_002267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002267 DALFDJ020000010.1 Protein Homology CDS 98667 98828 . - 0 ID=cds-HJH9163756.1;Parent=gene-O5D79_002267;Dbxref=NCBI_GP:HJH9163756.1;Name=HJH9163756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=O5D79_002267;product=DUF1328 domain-containing protein;protein_id=HJH9163756.1;transl_table=11 DALFDJ020000010.1 tpg gene 98957 99574 . - . ID=gene-O5D79_002268;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=O5D79_002268 DALFDJ020000010.1 Protein Homology CDS 98957 99574 . - 0 ID=cds-HJH9163757.1;Parent=gene-O5D79_002268;Dbxref=NCBI_GP:HJH9163757.1;Name=HJH9163757.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463417.1;locus_tag=O5D79_002268;product=molecular chaperone OsmY;protein_id=HJH9163757.1;transl_table=11 DALFDJ020000010.1 tpg gene 99976 101565 . - . ID=gene-O5D79_002269;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=O5D79_002269 DALFDJ020000010.1 Protein Homology CDS 99976 101565 . - 0 ID=cds-HJH9163758.1;Parent=gene-O5D79_002269;Dbxref=NCBI_GP:HJH9163758.1;Name=HJH9163758.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=O5D79_002269;product=peptide chain release factor 3;protein_id=HJH9163758.1;transl_table=11 DALFDJ020000010.1 tpg gene 101657 102334 . - . ID=gene-O5D79_002270;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=O5D79_002270 DALFDJ020000010.1 Protein Homology CDS 101657 102334 . - 0 ID=cds-HJH9163759.1;Parent=gene-O5D79_002270;Dbxref=NCBI_GP:HJH9163759.1;Name=HJH9163759.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=O5D79_002270;product=pyrimidine 5'-nucleotidase;protein_id=HJH9163759.1;transl_table=11 DALFDJ020000010.1 tpg gene 102356 102802 . - . ID=gene-O5D79_002271;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=O5D79_002271 DALFDJ020000010.1 Protein Homology CDS 102356 102802 . - 0 ID=cds-HJH9163760.1;Parent=gene-O5D79_002271;Dbxref=NCBI_GP:HJH9163760.1;Name=HJH9163760.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463414.1;locus_tag=O5D79_002271;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=HJH9163760.1;transl_table=11 DALFDJ020000010.1 tpg gene 102747 103184 . - . ID=gene-O5D79_002272;Name=O5D79_002272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002272 DALFDJ020000010.1 Protein Homology CDS 102747 103184 . - 0 ID=cds-HJH9163761.1;Parent=gene-O5D79_002272;Dbxref=NCBI_GP:HJH9163761.1;Name=HJH9163761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463413.1;locus_tag=O5D79_002272;product=DNA polymerase III subunit psi;protein_id=HJH9163761.1;transl_table=11 DALFDJ020000010.1 tpg gene 103287 104315 . + . ID=gene-O5D79_002273;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=O5D79_002273 DALFDJ020000010.1 Protein Homology CDS 103287 104315 . + 0 ID=cds-HJH9163762.1;Parent=gene-O5D79_002273;Dbxref=NCBI_GP:HJH9163762.1;Name=HJH9163762.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=O5D79_002273;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=HJH9163762.1;transl_table=11 DALFDJ020000010.1 tpg gene 104506 104592 . + . ID=gene-O5D79_002274;Name=O5D79_002274;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_002274 DALFDJ020000010.1 tRNAscan-SE tRNA 104506 104592 . + . ID=rna-O5D79_002274;Parent=gene-O5D79_002274;anticodon=(pos:104540..104542);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002274;product=tRNA-Leu DALFDJ020000010.1 tRNAscan-SE exon 104506 104592 . + . ID=exon-O5D79_002274-1;Parent=rna-O5D79_002274;anticodon=(pos:104540..104542);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002274;product=tRNA-Leu DALFDJ020000010.1 tpg gene 104620 104706 . + . ID=gene-O5D79_002275;Name=O5D79_002275;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_002275 DALFDJ020000010.1 tRNAscan-SE tRNA 104620 104706 . + . ID=rna-O5D79_002275;Parent=gene-O5D79_002275;anticodon=(pos:104654..104656);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002275;product=tRNA-Leu DALFDJ020000010.1 tRNAscan-SE exon 104620 104706 . + . ID=exon-O5D79_002275-1;Parent=rna-O5D79_002275;anticodon=(pos:104654..104656);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002275;product=tRNA-Leu DALFDJ020000010.1 tpg gene 104738 104824 . + . ID=gene-O5D79_002276;Name=O5D79_002276;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_002276 DALFDJ020000010.1 tRNAscan-SE tRNA 104738 104824 . + . ID=rna-O5D79_002276;Parent=gene-O5D79_002276;anticodon=(pos:104772..104774);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002276;product=tRNA-Leu DALFDJ020000010.1 tRNAscan-SE exon 104738 104824 . + . ID=exon-O5D79_002276-1;Parent=rna-O5D79_002276;anticodon=(pos:104772..104774);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002276;product=tRNA-Leu DALFDJ020000010.1 tpg gene 104856 105092 . - . ID=gene-O5D79_002277;Name=O5D79_002277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002277 DALFDJ020000010.1 Protein Homology CDS 104856 105092 . - 0 ID=cds-HJH9163763.1;Parent=gene-O5D79_002277;Dbxref=NCBI_GP:HJH9163763.1;Name=HJH9163763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463411.1;locus_tag=O5D79_002277;product=DUF1435 domain-containing protein;protein_id=HJH9163763.1;transl_table=11 DALFDJ020000010.1 tpg gene 105343 106407 . + . ID=gene-O5D79_002278;Name=O5D79_002278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002278 DALFDJ020000010.1 Protein Homology CDS 105343 106407 . + 0 ID=cds-HJH9163764.1;Parent=gene-O5D79_002278;Dbxref=NCBI_GP:HJH9163764.1;Name=HJH9163764.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463410.1;locus_tag=O5D79_002278;product=GGDEF domain-containing protein;protein_id=HJH9163764.1;transl_table=11 DALFDJ020000010.1 tpg gene 106528 107316 . + . ID=gene-O5D79_002279;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=O5D79_002279 DALFDJ020000010.1 Protein Homology CDS 106528 107316 . + 0 ID=cds-HJH9163765.1;Parent=gene-O5D79_002279;Dbxref=NCBI_GP:HJH9163765.1;Name=HJH9163765.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463409.1;locus_tag=O5D79_002279;product=siderophore-iron reductase FhuF;protein_id=HJH9163765.1;transl_table=11 DALFDJ020000010.1 tpg gene 107467 107925 . + . ID=gene-O5D79_002280;Name=O5D79_002280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002280 DALFDJ020000010.1 Protein Homology CDS 107467 107925 . + 0 ID=cds-HJH9163766.1;Parent=gene-O5D79_002280;Dbxref=NCBI_GP:HJH9163766.1;Name=HJH9163766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463408.1;locus_tag=O5D79_002280;product=YbaK/EbsC family protein;protein_id=HJH9163766.1;transl_table=11 DALFDJ020000010.1 tpg gene 107976 108650 . - . ID=gene-O5D79_002281;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=O5D79_002281 DALFDJ020000010.1 Protein Homology CDS 107976 108650 . - 0 ID=cds-HJH9163767.1;Parent=gene-O5D79_002281;Dbxref=NCBI_GP:HJH9163767.1;Name=HJH9163767.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463407.3;locus_tag=O5D79_002281;product=DNA-binding transcriptional activator BglJ;protein_id=HJH9163767.1;transl_table=11 DALFDJ020000010.1 tpg gene 108611 109336 . - . ID=gene-O5D79_002282;Name=O5D79_002282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002282 DALFDJ020000010.1 Protein Homology CDS 108611 109336 . - 0 ID=cds-HJH9163768.1;Parent=gene-O5D79_002282;Dbxref=NCBI_GP:HJH9163768.1;Name=HJH9163768.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463406.1;locus_tag=O5D79_002282;product=helix-turn-helix transcriptional regulator;protein_id=HJH9163768.1;transl_table=11 DALFDJ020000010.1 tpg gene 110049 110825 . + . ID=gene-O5D79_002283;Name=O5D79_002283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002283 DALFDJ020000010.1 Protein Homology CDS 110049 110825 . + 0 ID=cds-HJH9163769.1;Parent=gene-O5D79_002283;Dbxref=NCBI_GP:HJH9163769.1;Name=HJH9163769.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=O5D79_002283;product=threonine/serine ThrE exporter family protein;protein_id=HJH9163769.1;transl_table=11 DALFDJ020000010.1 tpg gene 110816 111289 . + . ID=gene-O5D79_002284;Name=O5D79_002284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002284 DALFDJ020000010.1 Protein Homology CDS 110816 111289 . + 0 ID=cds-HJH9163770.1;Parent=gene-O5D79_002284;Dbxref=NCBI_GP:HJH9163770.1;Name=HJH9163770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=O5D79_002284;product=threonine/serine exporter;protein_id=HJH9163770.1;transl_table=11 DALFDJ020000010.1 tpg gene 111382 111921 . + . ID=gene-O5D79_002285;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=O5D79_002285 DALFDJ020000010.1 Protein Homology CDS 111382 111921 . + 0 ID=cds-HJH9163771.1;Parent=gene-O5D79_002285;Dbxref=NCBI_GP:HJH9163771.1;Name=HJH9163771.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463403.1;locus_tag=O5D79_002285;product=primosomal protein DnaT;protein_id=HJH9163771.1;transl_table=11 DALFDJ020000010.1 tpg gene 111924 112661 . + . ID=gene-O5D79_002286;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=O5D79_002286 DALFDJ020000010.1 Protein Homology CDS 111924 112661 . + 0 ID=cds-HJH9163772.1;Parent=gene-O5D79_002286;Dbxref=NCBI_GP:HJH9163772.1;Name=HJH9163772.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463402.1;locus_tag=O5D79_002286;product=DNA replication protein DnaC;protein_id=HJH9163772.1;transl_table=11 DALFDJ020000010.1 tpg gene 112719 113180 . + . ID=gene-O5D79_002287;Name=O5D79_002287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002287 DALFDJ020000010.1 Protein Homology CDS 112719 113180 . + 0 ID=cds-HJH9163773.1;Parent=gene-O5D79_002287;Dbxref=NCBI_GP:HJH9163773.1;Name=HJH9163773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463401.1;locus_tag=O5D79_002287;product=DUF2501 domain-containing protein;protein_id=HJH9163773.1;transl_table=11 DALFDJ020000010.1 tpg gene 113463 115754 . + . ID=gene-O5D79_002288;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=O5D79_002288 DALFDJ020000010.1 Protein Homology CDS 113463 115754 . + 0 ID=cds-HJH9163774.1;Parent=gene-O5D79_002288;Dbxref=NCBI_GP:HJH9163774.1;Name=HJH9163774.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418779.2;locus_tag=O5D79_002288;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=HJH9163774.1;transl_table=11 DALFDJ020000010.1 tpg gene 115888 116898 . - . ID=gene-O5D79_002289;Name=O5D79_002289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002289 DALFDJ020000010.1 Protein Homology CDS 115888 116898 . - 0 ID=cds-HJH9163775.1;Parent=gene-O5D79_002289;Dbxref=NCBI_GP:HJH9163775.1;Name=HJH9163775.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224961.1;locus_tag=O5D79_002289;product=SIS domain-containing protein;protein_id=HJH9163775.1;transl_table=11 DALFDJ020000010.1 tpg gene 116916 117977 . - . ID=gene-O5D79_002290;Name=O5D79_002290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002290 DALFDJ020000010.1 Protein Homology CDS 116916 117977 . - 0 ID=cds-HJH9163776.1;Parent=gene-O5D79_002290;Dbxref=NCBI_GP:HJH9163776.1;Name=HJH9163776.1;Ontology_term=GO:0005975,GO:0016787,GO:0097367;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463398.1;locus_tag=O5D79_002290;product=SIS domain-containing protein;protein_id=HJH9163776.1;transl_table=11 DALFDJ020000010.1 tpg gene 117990 118838 . - . ID=gene-O5D79_002291;Name=O5D79_002291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002291 DALFDJ020000010.1 Protein Homology CDS 117990 118838 . - 0 ID=cds-HJH9163777.1;Parent=gene-O5D79_002291;Dbxref=NCBI_GP:HJH9163777.1;Name=HJH9163777.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224959.1;locus_tag=O5D79_002291;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=HJH9163777.1;transl_table=11 DALFDJ020000010.1 tpg gene 118816 119595 . - . ID=gene-O5D79_002292;Name=O5D79_002292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002292 DALFDJ020000010.1 Protein Homology CDS 118816 119595 . - 0 ID=cds-HJH9163778.1;Parent=gene-O5D79_002292;Dbxref=NCBI_GP:HJH9163778.1;Name=HJH9163778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463396.1;locus_tag=O5D79_002292;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=HJH9163778.1;transl_table=11 DALFDJ020000010.1 tpg gene 119621 120082 . - . ID=gene-O5D79_002293;Name=O5D79_002293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002293 DALFDJ020000010.1 Protein Homology CDS 119621 120082 . - 0 ID=cds-HJH9163779.1;Parent=gene-O5D79_002293;Dbxref=NCBI_GP:HJH9163779.1;Name=HJH9163779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463395.1;locus_tag=O5D79_002293;product=PTS sugar transporter subunit IIB;protein_id=HJH9163779.1;transl_table=11 DALFDJ020000010.1 tpg gene 120097 120519 . - . ID=gene-O5D79_002294;Name=O5D79_002294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002294 DALFDJ020000010.1 Protein Homology CDS 120097 120519 . - 0 ID=cds-HJH9163780.1;Parent=gene-O5D79_002294;Dbxref=NCBI_GP:HJH9163780.1;Name=HJH9163780.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463394.1;locus_tag=O5D79_002294;product=PTS sugar transporter subunit IIA;protein_id=HJH9163780.1;transl_table=11 DALFDJ020000010.1 tpg gene 120621 123386 . - . ID=gene-O5D79_002295;Name=O5D79_002295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002295 DALFDJ020000010.1 Protein Homology CDS 120621 123386 . - 0 ID=cds-HJH9163781.1;Parent=gene-O5D79_002295;Dbxref=NCBI_GP:HJH9163781.1;Name=HJH9163781.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463393.1;locus_tag=O5D79_002295;product=sigma 54-interacting transcriptional regulator;protein_id=HJH9163781.1;transl_table=11 DALFDJ020000010.1 tpg pseudogene 123523 123597 . + . ID=gene-O5D79_002296;Name=O5D79_002296;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_002296;pseudo=true DALFDJ020000010.1 Protein Homology CDS 123523 123597 . + 0 ID=cds-O5D79_002296;Parent=gene-O5D79_002296;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012134222.1;locus_tag=O5D79_002296;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 DALFDJ020000010.1 tpg gene 123710 125371 . - . ID=gene-O5D79_002297;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=O5D79_002297 DALFDJ020000010.1 Protein Homology CDS 123710 125371 . - 0 ID=cds-HJH9163782.1;Parent=gene-O5D79_002297;Dbxref=NCBI_GP:HJH9163782.1;Name=HJH9163782.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=O5D79_002297;product=methyl-accepting chemotaxis protein;protein_id=HJH9163782.1;transl_table=11 DALFDJ020000010.1 tpg gene 125738 127888 . + . ID=gene-O5D79_002298;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=O5D79_002298 DALFDJ020000010.1 Protein Homology CDS 125738 127888 . + 0 ID=cds-HJH9163783.1;Parent=gene-O5D79_002298;Dbxref=NCBI_GP:HJH9163783.1;Name=HJH9163783.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463391.1;locus_tag=O5D79_002298;product=pyruvate/proton symporter BtsT;protein_id=HJH9163783.1;transl_table=11 DALFDJ020000010.1 tpg gene 127983 128186 . + . ID=gene-O5D79_002299;Name=O5D79_002299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002299 DALFDJ020000010.1 Protein Homology CDS 127983 128186 . + 0 ID=cds-HJH9163784.1;Parent=gene-O5D79_002299;Dbxref=NCBI_GP:HJH9163784.1;Name=HJH9163784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463390.1;locus_tag=O5D79_002299;product=YbdD/YjiX family protein;protein_id=HJH9163784.1;transl_table=11 DALFDJ020000010.1 tpg gene 128197 129153 . + . ID=gene-O5D79_002300;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=O5D79_002300 DALFDJ020000010.1 Protein Homology CDS 128197 129153 . + 0 ID=cds-HJH9163785.1;Parent=gene-O5D79_002300;Dbxref=NCBI_GP:HJH9163785.1;Name=HJH9163785.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463389.1;locus_tag=O5D79_002300;product=GTPase;protein_id=HJH9163785.1;transl_table=11 DALFDJ020000010.1 tpg gene 129228 129530 . - . ID=gene-O5D79_002301;Name=O5D79_002301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002301 DALFDJ020000010.1 Protein Homology CDS 129228 129530 . - 0 ID=cds-HJH9163786.1;Parent=gene-O5D79_002301;Dbxref=NCBI_GP:HJH9163786.1;Name=HJH9163786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463388.1;locus_tag=O5D79_002301;product=BrnA antitoxin family protein;protein_id=HJH9163786.1;transl_table=11 DALFDJ020000010.1 tpg gene 129517 129804 . - . ID=gene-O5D79_002302;Name=O5D79_002302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002302 DALFDJ020000010.1 Protein Homology CDS 129517 129804 . - 0 ID=cds-HJH9163787.1;Parent=gene-O5D79_002302;Dbxref=NCBI_GP:HJH9163787.1;Name=HJH9163787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463387.1;locus_tag=O5D79_002302;product=BrnT family toxin;protein_id=HJH9163787.1;transl_table=11 DALFDJ020000010.1 tpg gene 130073 130987 . - . ID=gene-O5D79_002303;Name=O5D79_002303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002303 DALFDJ020000010.1 Protein Homology CDS 130073 130987 . - 0 ID=cds-HJH9163788.1;Parent=gene-O5D79_002303;Dbxref=NCBI_GP:HJH9163788.1;Name=HJH9163788.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463386.1;locus_tag=O5D79_002303;product=restriction endonuclease;protein_id=HJH9163788.1;transl_table=11 DALFDJ020000010.1 tpg gene 131185 134694 . + . ID=gene-O5D79_002304;Name=hsdR;gbkey=Gene;gene=hsdR;gene_biotype=protein_coding;locus_tag=O5D79_002304 DALFDJ020000010.1 Protein Homology CDS 131185 134694 . + 0 ID=cds-HJH9163789.1;Parent=gene-O5D79_002304;Dbxref=NCBI_GP:HJH9163789.1;Name=HJH9163789.1;gbkey=CDS;gene=hsdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463385.1;locus_tag=O5D79_002304;product=type I restriction-modification system endonuclease;protein_id=HJH9163789.1;transl_table=11 DALFDJ020000010.1 tpg gene 134888 136477 . + . ID=gene-O5D79_002305;Name=O5D79_002305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002305 DALFDJ020000010.1 Protein Homology CDS 134888 136477 . + 0 ID=cds-HJH9163790.1;Parent=gene-O5D79_002305;Dbxref=NCBI_GP:HJH9163790.1;Name=HJH9163790.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463384.1;locus_tag=O5D79_002305;product=N-6 DNA methylase;protein_id=HJH9163790.1;transl_table=11 DALFDJ020000010.1 tpg gene 136474 137862 . + . ID=gene-O5D79_002306;Name=hsdS;gbkey=Gene;gene=hsdS;gene_biotype=protein_coding;locus_tag=O5D79_002306 DALFDJ020000010.1 Protein Homology CDS 136474 137862 . + 0 ID=cds-HJH9163791.1;Parent=gene-O5D79_002306;Dbxref=NCBI_GP:HJH9163791.1;Name=HJH9163791.1;gbkey=CDS;gene=hsdS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505871.1;locus_tag=O5D79_002306;product=type I restriction-modification system specificity subunit;protein_id=HJH9163791.1;transl_table=11 DALFDJ020000010.1 tpg pseudogene 138213 138407 . + . ID=gene-O5D79_002307;Name=O5D79_002307;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_002307;pseudo=true DALFDJ020000010.1 Protein Homology CDS 138213 138407 . + 0 ID=cds-O5D79_002307;Parent=gene-O5D79_002307;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463382.1;locus_tag=O5D79_002307;product=SymE family type I addiction module toxin;pseudo=true;transl_table=11 DALFDJ020000010.1 tpg pseudogene 138499 139199 . + . ID=gene-O5D79_002308;Name=O5D79_002308;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_002308;pseudo=true DALFDJ020000010.1 Protein Homology CDS 138499 139199 . + 0 ID=cds-O5D79_002308;Parent=gene-O5D79_002308;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463381.1;locus_tag=O5D79_002308;product=hypothetical protein;pseudo=true;transl_table=11 DALFDJ020000010.1 tpg gene 139274 139438 . - . ID=gene-O5D79_002309;Name=yjiS;gbkey=Gene;gene=yjiS;gene_biotype=protein_coding;locus_tag=O5D79_002309 DALFDJ020000010.1 Protein Homology CDS 139274 139438 . - 0 ID=cds-HJH9163792.1;Parent=gene-O5D79_002309;Dbxref=NCBI_GP:HJH9163792.1;Name=HJH9163792.1;gbkey=CDS;gene=yjiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463380.1;locus_tag=O5D79_002309;product=DUF1127 domain-containing protein YjiS;protein_id=HJH9163792.1;transl_table=11 DALFDJ020000010.1 tpg gene 139405 139548 . + . ID=gene-O5D79_002310;Name=O5D79_002310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002310 DALFDJ020000010.1 Protein Homology CDS 139405 139548 . + 0 ID=cds-HJH9163793.1;Parent=gene-O5D79_002310;Dbxref=NCBI_GP:HJH9163793.1;Name=HJH9163793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463379.1;locus_tag=O5D79_002310;product=hypothetical protein;protein_id=HJH9163793.1;transl_table=11 DALFDJ020000010.1 tpg gene 139643 141013 . - . ID=gene-O5D79_002311;Name=O5D79_002311;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002311 DALFDJ020000010.1 Protein Homology CDS 139643 141013 . - 0 ID=cds-HJH9163794.1;Parent=gene-O5D79_002311;Dbxref=NCBI_GP:HJH9163794.1;Name=HJH9163794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463378.1;locus_tag=O5D79_002311;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=HJH9163794.1;transl_table=11 DALFDJ020000010.1 tpg gene 141194 142159 . - . ID=gene-O5D79_002312;Name=O5D79_002312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002312 DALFDJ020000010.1 Protein Homology CDS 141194 142159 . - 0 ID=cds-HJH9163795.1;Parent=gene-O5D79_002312;Dbxref=NCBI_GP:HJH9163795.1;Name=HJH9163795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000749539.1;locus_tag=O5D79_002312;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=HJH9163795.1;transl_table=11 DALFDJ020000010.1 tpg gene 142638 143879 . + . ID=gene-O5D79_002313;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=O5D79_002313 DALFDJ020000010.1 Protein Homology CDS 142638 143879 . + 0 ID=cds-HJH9163796.1;Parent=gene-O5D79_002313;Dbxref=NCBI_GP:HJH9163796.1;Name=HJH9163796.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463376.1;locus_tag=O5D79_002313;product=multidrug efflux MFS transporter MdtM;protein_id=HJH9163796.1;transl_table=11 DALFDJ020000010.1 tpg gene 143966 145237 . + . ID=gene-O5D79_002314;Name=O5D79_002314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002314 DALFDJ020000010.1 Protein Homology CDS 143966 145237 . + 0 ID=cds-HJH9163797.1;Parent=gene-O5D79_002314;Dbxref=NCBI_GP:HJH9163797.1;Name=HJH9163797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463375.1;locus_tag=O5D79_002314;product=DUF445 domain-containing protein;protein_id=HJH9163797.1;transl_table=11 DALFDJ020000010.1 tpg gene 145456 146640 . + . ID=gene-O5D79_002315;Name=O5D79_002315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002315 DALFDJ020000010.1 Protein Homology CDS 145456 146640 . + 0 ID=cds-HJH9163798.1;Parent=gene-O5D79_002315;Dbxref=NCBI_GP:HJH9163798.1;Name=HJH9163798.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463374.1;locus_tag=O5D79_002315;product=MFS transporter;protein_id=HJH9163798.1;transl_table=11 DALFDJ020000010.1 tpg gene 147513 148184 . + . ID=gene-O5D79_002316;Name=O5D79_002316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002316 DALFDJ020000010.1 Protein Homology CDS 147513 148184 . + 0 ID=cds-HJH9163799.1;Parent=gene-O5D79_002316;Dbxref=NCBI_GP:HJH9163799.1;Name=HJH9163799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=O5D79_002316;product=nucleoside recognition domain-containing protein;protein_id=HJH9163799.1;transl_table=11 DALFDJ020000010.1 tpg gene 148181 148642 . + . ID=gene-O5D79_002317;Name=O5D79_002317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002317 DALFDJ020000010.1 Protein Homology CDS 148181 148642 . + 0 ID=cds-HJH9163800.1;Parent=gene-O5D79_002317;Dbxref=NCBI_GP:HJH9163800.1;Name=HJH9163800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463372.1;locus_tag=O5D79_002317;product=YjiG family protein;protein_id=HJH9163800.1;transl_table=11 DALFDJ020000010.1 tpg gene 148655 149827 . + . ID=gene-O5D79_002318;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=O5D79_002318 DALFDJ020000010.1 Protein Homology CDS 148655 149827 . + 0 ID=cds-HJH9163801.1;Parent=gene-O5D79_002318;Dbxref=NCBI_GP:HJH9163801.1;Name=HJH9163801.1;Ontology_term=GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463371.1;locus_tag=O5D79_002318;product=beta-aspartyl-peptidase;protein_id=HJH9163801.1;transl_table=11 DALFDJ020000010.1 tpg gene 149946 150854 . + . ID=gene-O5D79_002319;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=O5D79_002319 DALFDJ020000010.1 Protein Homology CDS 149946 150854 . + 0 ID=cds-HJH9163802.1;Parent=gene-O5D79_002319;Dbxref=NCBI_GP:HJH9163802.1;Name=HJH9163802.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463370.1;locus_tag=O5D79_002319;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=HJH9163802.1;transl_table=11 DALFDJ020000010.1 tpg gene 150860 151594 . - . ID=gene-O5D79_002320;Name=O5D79_002320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002320 DALFDJ020000010.1 Protein Homology CDS 150860 151594 . - 0 ID=cds-HJH9163803.1;Parent=gene-O5D79_002320;Dbxref=NCBI_GP:HJH9163803.1;Name=HJH9163803.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463369.1;locus_tag=O5D79_002320;product=aspartate/glutamate racemase family protein;protein_id=HJH9163803.1;transl_table=11 DALFDJ020000010.1 tpg gene 151833 152363 . - . ID=gene-O5D79_002321;Name=O5D79_002321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002321 DALFDJ020000010.1 Protein Homology CDS 151833 152363 . - 0 ID=cds-HJH9163804.1;Parent=gene-O5D79_002321;Dbxref=NCBI_GP:HJH9163804.1;Name=HJH9163804.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463368.3;locus_tag=O5D79_002321;product=Hcp family type VI secretion system effector;protein_id=HJH9163804.1;transl_table=11 DALFDJ020000010.1 tpg gene 153081 154094 . + . ID=gene-O5D79_002322;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=O5D79_002322 DALFDJ020000010.1 Protein Homology CDS 153081 154094 . + 0 ID=cds-HJH9163805.1;Parent=gene-O5D79_002322;Dbxref=NCBI_GP:HJH9163805.1;Name=HJH9163805.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463367.1;locus_tag=O5D79_002322;product=tryptophan--tRNA ligase;protein_id=HJH9163805.1;transl_table=11 DALFDJ020000010.1 tpg gene 154095 154868 . - . ID=gene-O5D79_002323;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=O5D79_002323 DALFDJ020000010.1 Protein Homology CDS 154095 154868 . - 0 ID=cds-HJH9163806.1;Parent=gene-O5D79_002323;Dbxref=NCBI_GP:HJH9163806.1;Name=HJH9163806.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463366.1;locus_tag=O5D79_002323;product=Uxu operon transcriptional regulator;protein_id=HJH9163806.1;transl_table=11 DALFDJ020000010.1 tpg gene 155218 155892 . + . ID=gene-O5D79_002324;Name=O5D79_002324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002324 DALFDJ020000010.1 Protein Homology CDS 155218 155892 . + 0 ID=cds-HJH9163807.1;Parent=gene-O5D79_002324;Dbxref=NCBI_GP:HJH9163807.1;Name=HJH9163807.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463365.1;locus_tag=O5D79_002324;product=dienelactone hydrolase family protein;protein_id=HJH9163807.1;transl_table=11 DALFDJ020000010.1 tpg gene 155889 156350 . - . ID=gene-O5D79_002325;Name=O5D79_002325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002325 DALFDJ020000010.1 Protein Homology CDS 155889 156350 . - 0 ID=cds-HJH9163808.1;Parent=gene-O5D79_002325;Dbxref=NCBI_GP:HJH9163808.1;Name=HJH9163808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463364.1;locus_tag=O5D79_002325;product=DUF302 domain-containing protein;protein_id=HJH9163808.1;transl_table=11 DALFDJ020000010.1 tpg gene 156555 157466 . - . ID=gene-O5D79_002326;Name=O5D79_002326;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002326 DALFDJ020000010.1 Protein Homology CDS 156555 157466 . - 0 ID=cds-HJH9163809.1;Parent=gene-O5D79_002326;Dbxref=NCBI_GP:HJH9163809.1;Name=HJH9163809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463363.1;locus_tag=O5D79_002326;product=STM4504/CBY_0614 family protein;protein_id=HJH9163809.1;transl_table=11 DALFDJ020000010.1 tpg gene 157820 158428 . - . ID=gene-O5D79_002327;Name=O5D79_002327;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002327 DALFDJ020000010.1 Protein Homology CDS 157820 158428 . - 0 ID=cds-HJH9163810.1;Parent=gene-O5D79_002327;Dbxref=NCBI_GP:HJH9163810.1;Name=HJH9163810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463361.1;locus_tag=O5D79_002327;product=DUF1062 domain-containing protein;protein_id=HJH9163810.1;transl_table=11 DALFDJ020000010.1 tpg gene 158917 159174 . + . ID=gene-O5D79_002328;Name=O5D79_002328;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002328 DALFDJ020000010.1 Protein Homology CDS 158917 159174 . + 0 ID=cds-HJH9163811.1;Parent=gene-O5D79_002328;Dbxref=NCBI_GP:HJH9163811.1;Name=HJH9163811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463360.1;locus_tag=O5D79_002328;product=YjhX family toxin;protein_id=HJH9163811.1;transl_table=11 DALFDJ020000010.1 tpg gene 159179 160810 . + . ID=gene-O5D79_002329;Name=O5D79_002329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002329 DALFDJ020000010.1 Protein Homology CDS 159179 160810 . + 0 ID=cds-HJH9163812.1;Parent=gene-O5D79_002329;Dbxref=NCBI_GP:HJH9163812.1;Name=HJH9163812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463359.1;locus_tag=O5D79_002329;product=methyltransferase domain-containing protein;protein_id=HJH9163812.1;transl_table=11 DALFDJ020000010.1 tpg gene 161370 162086 . + . ID=gene-O5D79_002330;Name=O5D79_002330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002330 DALFDJ020000010.1 Protein Homology CDS 161370 162086 . + 0 ID=cds-HJH9163813.1;Parent=gene-O5D79_002330;Dbxref=NCBI_GP:HJH9163813.1;Name=HJH9163813.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416490.1;locus_tag=O5D79_002330;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=HJH9163813.1;transl_table=11 DALFDJ020000010.1 tpg gene 162567 163442 . - . ID=gene-O5D79_002331;Name=O5D79_002331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002331 DALFDJ020000010.1 Protein Homology CDS 162567 163442 . - 0 ID=cds-HJH9163814.1;Parent=gene-O5D79_002331;Dbxref=NCBI_GP:HJH9163814.1;Name=HJH9163814.1;Ontology_term=GO:0009307,GO:0015666;gbkey=CDS;go_function=restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465694.1;locus_tag=O5D79_002331;product=phosphorothioated DNA-binding restriction endonuclease;protein_id=HJH9163814.1;transl_table=11 DALFDJ020000010.1 tpg gene 163988 165013 . + . ID=gene-O5D79_002332;Name=O5D79_002332;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002332 DALFDJ020000010.1 Protein Homology CDS 163988 165013 . + 0 ID=cds-HJH9163815.1;Parent=gene-O5D79_002332;Dbxref=NCBI_GP:HJH9163815.1;Name=HJH9163815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000369883.1;locus_tag=O5D79_002332;product=phage portal protein;protein_id=HJH9163815.1;transl_table=11 DALFDJ020000010.1 tpg gene 165041 166711 . - . ID=gene-O5D79_002333;Name=O5D79_002333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002333 DALFDJ020000010.1 Protein Homology CDS 165041 166711 . - 0 ID=cds-HJH9163816.1;Parent=gene-O5D79_002333;Dbxref=NCBI_GP:HJH9163816.1;Name=HJH9163816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000368629.1;locus_tag=O5D79_002333;product=hypothetical protein;protein_id=HJH9163816.1;transl_table=11 DALFDJ020000010.1 tpg gene 167027 167299 . - . ID=gene-O5D79_002334;Name=O5D79_002334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002334 DALFDJ020000010.1 Protein Homology CDS 167027 167299 . - 0 ID=cds-HJH9163817.1;Parent=gene-O5D79_002334;Dbxref=NCBI_GP:HJH9163817.1;Name=HJH9163817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185338.1;locus_tag=O5D79_002334;product=ogr/Delta-like zinc finger family protein;protein_id=HJH9163817.1;transl_table=11 DALFDJ020000010.1 tpg gene 167299 168060 . - . ID=gene-O5D79_002335;Name=O5D79_002335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002335 DALFDJ020000010.1 Protein Homology CDS 167299 168060 . - 0 ID=cds-HJH9163818.1;Parent=gene-O5D79_002335;Dbxref=NCBI_GP:HJH9163818.1;Name=HJH9163818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066197.1;locus_tag=O5D79_002335;product=septation initiation protein;protein_id=HJH9163818.1;transl_table=11 DALFDJ020000010.1 tpg gene 168461 168763 . - . ID=gene-O5D79_002336;Name=O5D79_002336;end_range=168763,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002336;partial=true DALFDJ020000010.1 Protein Homology CDS 168461 168763 . - 0 ID=cds-HJH9163819.1;Parent=gene-O5D79_002336;Dbxref=NCBI_GP:HJH9163819.1;Name=HJH9163819.1;end_range=168763,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211874.1;locus_tag=O5D79_002336;partial=true;product=alkaline-shock protein;protein_id=HJH9163819.1;transl_table=11 ##sequence-region DALFDJ020000011.1 1 168279 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000011.1 tpg region 1 168279 . + . ID=DALFDJ020000011.1:1..168279;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000011.1 tpg gene 392 1507 . + . ID=gene-O5D79_002337;Name=iroB;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=O5D79_002337 DALFDJ020000011.1 Protein Homology CDS 392 1507 . + 0 ID=cds-HJH9163820.1;Parent=gene-O5D79_002337;Dbxref=NCBI_GP:HJH9163820.1;Name=HJH9163820.1;gbkey=CDS;gene=iroB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461700.1;locus_tag=O5D79_002337;product=salmochelin biosynthesis C-glycosyltransferase IroB;protein_id=HJH9163820.1;transl_table=11 DALFDJ020000011.1 tpg gene 1588 5244 . + . ID=gene-O5D79_002338;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=protein_coding;locus_tag=O5D79_002338 DALFDJ020000011.1 Protein Homology CDS 1588 5244 . + 0 ID=cds-HJH9163821.1;Parent=gene-O5D79_002338;Dbxref=NCBI_GP:HJH9163821.1;Name=HJH9163821.1;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461701.1;locus_tag=O5D79_002338;product=salmochelin/enterobactin export ABC transporter IroC;protein_id=HJH9163821.1;transl_table=11 DALFDJ020000011.1 tpg gene 5354 6598 . + . ID=gene-O5D79_002339;Name=O5D79_002339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002339 DALFDJ020000011.1 Protein Homology CDS 5354 6598 . + 0 ID=cds-HJH9163822.1;Parent=gene-O5D79_002339;Dbxref=NCBI_GP:HJH9163822.1;Name=HJH9163822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461702.1;locus_tag=O5D79_002339;product=alpha/beta hydrolase-fold protein;protein_id=HJH9163822.1;transl_table=11 DALFDJ020000011.1 tpg gene 6630 7565 . + . ID=gene-O5D79_002340;Name=O5D79_002340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002340 DALFDJ020000011.1 Protein Homology CDS 6630 7565 . + 0 ID=cds-HJH9163823.1;Parent=gene-O5D79_002340;Dbxref=NCBI_GP:HJH9163823.1;Name=HJH9163823.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461703.1;locus_tag=O5D79_002340;product=alpha/beta hydrolase;protein_id=HJH9163823.1;transl_table=11 DALFDJ020000011.1 tpg gene 7607 9781 . - . ID=gene-O5D79_002341;Name=O5D79_002341;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002341 DALFDJ020000011.1 Protein Homology CDS 7607 9781 . - 0 ID=cds-HJH9163824.1;Parent=gene-O5D79_002341;Dbxref=NCBI_GP:HJH9163824.1;Name=HJH9163824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542215.1;locus_tag=O5D79_002341;product=TonB-dependent siderophore receptor;protein_id=HJH9163824.1;transl_table=11 DALFDJ020000011.1 tpg gene 10825 11877 . - . ID=gene-O5D79_002342;Name=pipB2;gbkey=Gene;gene=pipB2;gene_biotype=protein_coding;locus_tag=O5D79_002342 DALFDJ020000011.1 Protein Homology CDS 10825 11877 . - 0 ID=cds-HJH9163825.1;Parent=gene-O5D79_002342;Dbxref=NCBI_GP:HJH9163825.1;Name=HJH9163825.1;gbkey=CDS;gene=pipB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461706.1;locus_tag=O5D79_002342;product=SPI-2 type III secretion system effector PipB2;protein_id=HJH9163825.1;transl_table=11 DALFDJ020000011.1 tpg gene 12396 13325 . + . ID=gene-O5D79_002343;Name=O5D79_002343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002343 DALFDJ020000011.1 Protein Homology CDS 12396 13325 . + 0 ID=cds-HJH9163826.1;Parent=gene-O5D79_002343;Dbxref=NCBI_GP:HJH9163826.1;Name=HJH9163826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461707.1;locus_tag=O5D79_002343;product=VirK family antimicrobial peptide resistance protein;protein_id=HJH9163826.1;transl_table=11 DALFDJ020000011.1 tpg gene 13619 14515 . + . ID=gene-O5D79_002344;Name=O5D79_002344;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002344 DALFDJ020000011.1 Protein Homology CDS 13619 14515 . + 0 ID=cds-HJH9163827.1;Parent=gene-O5D79_002344;Dbxref=NCBI_GP:HJH9163827.1;Name=HJH9163827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461708.1;locus_tag=O5D79_002344;product=antimicrobial resistance protein Mig-14;protein_id=HJH9163827.1;transl_table=11 DALFDJ020000011.1 tpg gene 15237 16250 . - . ID=gene-O5D79_002345;Name=O5D79_002345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002345 DALFDJ020000011.1 Protein Homology CDS 15237 16250 . - 0 ID=cds-HJH9163828.1;Parent=gene-O5D79_002345;Dbxref=NCBI_GP:HJH9163828.1;Name=HJH9163828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461709.1;locus_tag=O5D79_002345;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=HJH9163828.1;transl_table=11 DALFDJ020000011.1 tpg gene 16383 17798 . - . ID=gene-O5D79_002346;Name=O5D79_002346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002346 DALFDJ020000011.1 Protein Homology CDS 16383 17798 . - 0 ID=cds-HJH9163829.1;Parent=gene-O5D79_002346;Dbxref=NCBI_GP:HJH9163829.1;Name=HJH9163829.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461710.1;locus_tag=O5D79_002346;product=sensor histidine kinase;protein_id=HJH9163829.1;transl_table=11 DALFDJ020000011.1 tpg gene 17785 18459 . - . ID=gene-O5D79_002347;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=O5D79_002347 DALFDJ020000011.1 Protein Homology CDS 17785 18459 . - 0 ID=cds-HJH9163830.1;Parent=gene-O5D79_002347;Dbxref=NCBI_GP:HJH9163830.1;Name=HJH9163830.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=O5D79_002347;product=transcriptional regulator TctD;protein_id=HJH9163830.1;transl_table=11 DALFDJ020000011.1 tpg gene 18614 19591 . + . ID=gene-O5D79_002348;Name=O5D79_002348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002348 DALFDJ020000011.1 Protein Homology CDS 18614 19591 . + 0 ID=cds-HJH9163831.1;Parent=gene-O5D79_002348;Dbxref=NCBI_GP:HJH9163831.1;Name=HJH9163831.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=O5D79_002348;product=Bug family tripartite tricarboxylate transporter substrate binding protein;protein_id=HJH9163831.1;transl_table=11 DALFDJ020000011.1 tpg gene 19603 20037 . + . ID=gene-O5D79_002349;Name=O5D79_002349;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002349 DALFDJ020000011.1 Protein Homology CDS 19603 20037 . + 0 ID=cds-HJH9163832.1;Parent=gene-O5D79_002349;Dbxref=NCBI_GP:HJH9163832.1;Name=HJH9163832.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461713.3;locus_tag=O5D79_002349;product=tripartite tricarboxylate transporter TctB family protein;protein_id=HJH9163832.1;transl_table=11 DALFDJ020000011.1 tpg gene 20048 21562 . + . ID=gene-O5D79_002350;Name=O5D79_002350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002350 DALFDJ020000011.1 Protein Homology CDS 20048 21562 . + 0 ID=cds-HJH9163833.1;Parent=gene-O5D79_002350;Dbxref=NCBI_GP:HJH9163833.1;Name=HJH9163833.1;Ontology_term=GO:0006810,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=O5D79_002350;product=tripartite tricarboxylate transporter permease;protein_id=HJH9163833.1;transl_table=11 DALFDJ020000011.1 tpg gene 21865 22842 . + . ID=gene-O5D79_002351;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=O5D79_002351 DALFDJ020000011.1 Protein Homology CDS 21865 22842 . + 0 ID=cds-HJH9163834.1;Parent=gene-O5D79_002351;Dbxref=NCBI_GP:HJH9163834.1;Name=HJH9163834.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=O5D79_002351;product=glutarate dioxygenase GlaH;protein_id=HJH9163834.1;transl_table=11 DALFDJ020000011.1 tpg gene 22868 24136 . + . ID=gene-O5D79_002352;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=O5D79_002352 DALFDJ020000011.1 Protein Homology CDS 22868 24136 . + 0 ID=cds-HJH9163835.1;Parent=gene-O5D79_002352;Dbxref=NCBI_GP:HJH9163835.1;Name=HJH9163835.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461716.1;locus_tag=O5D79_002352;product=L-2-hydroxyglutarate oxidase;protein_id=HJH9163835.1;transl_table=11 DALFDJ020000011.1 tpg gene 24158 25606 . + . ID=gene-O5D79_002353;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=O5D79_002353 DALFDJ020000011.1 Protein Homology CDS 24158 25606 . + 0 ID=cds-HJH9163836.1;Parent=gene-O5D79_002353;Dbxref=NCBI_GP:HJH9163836.1;Name=HJH9163836.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461717.1;locus_tag=O5D79_002353;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=HJH9163836.1;transl_table=11 DALFDJ020000011.1 tpg gene 25621 26904 . + . ID=gene-O5D79_002354;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=O5D79_002354 DALFDJ020000011.1 Protein Homology CDS 25621 26904 . + 0 ID=cds-HJH9163837.1;Parent=gene-O5D79_002354;Dbxref=NCBI_GP:HJH9163837.1;Name=HJH9163837.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461718.1;locus_tag=O5D79_002354;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=HJH9163837.1;transl_table=11 DALFDJ020000011.1 tpg gene 27034 28434 . + . ID=gene-O5D79_002355;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=O5D79_002355 DALFDJ020000011.1 Protein Homology CDS 27034 28434 . + 0 ID=cds-HJH9163838.1;Parent=gene-O5D79_002355;Dbxref=NCBI_GP:HJH9163838.1;Name=HJH9163838.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461719.1;locus_tag=O5D79_002355;product=GABA permease;protein_id=HJH9163838.1;transl_table=11 DALFDJ020000011.1 tpg gene 28476 29153 . + . ID=gene-O5D79_002356;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=O5D79_002356 DALFDJ020000011.1 Protein Homology CDS 28476 29153 . + 0 ID=cds-HJH9163839.1;Parent=gene-O5D79_002356;Dbxref=NCBI_GP:HJH9163839.1;Name=HJH9163839.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461720.1;locus_tag=O5D79_002356;product=DNA-binding transcriptional regulator CsiR;protein_id=HJH9163839.1;transl_table=11 DALFDJ020000011.1 tpg gene 29175 29624 . - . ID=gene-O5D79_002357;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=O5D79_002357 DALFDJ020000011.1 Protein Homology CDS 29175 29624 . - 0 ID=cds-HJH9163840.1;Parent=gene-O5D79_002357;Dbxref=NCBI_GP:HJH9163840.1;Name=HJH9163840.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461721.1;locus_tag=O5D79_002357;product=peptidoglycan-binding protein LysM;protein_id=HJH9163840.1;transl_table=11 DALFDJ020000011.1 tpg gene 29724 29882 . - . ID=gene-O5D79_002358;Name=O5D79_002358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002358 DALFDJ020000011.1 Protein Homology CDS 29724 29882 . - 0 ID=cds-HJH9163841.1;Parent=gene-O5D79_002358;Dbxref=NCBI_GP:HJH9163841.1;Name=HJH9163841.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461722.1;locus_tag=O5D79_002358;product=YqaE/Pmp3 family membrane protein;protein_id=HJH9163841.1;transl_table=11 DALFDJ020000011.1 tpg gene 30065 30364 . + . ID=gene-O5D79_002359;Name=O5D79_002359;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002359 DALFDJ020000011.1 Protein Homology CDS 30065 30364 . + 0 ID=cds-HJH9163842.1;Parent=gene-O5D79_002359;Dbxref=NCBI_GP:HJH9163842.1;Name=HJH9163842.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461723.1;locus_tag=O5D79_002359;product=ArsR/SmtB family transcription factor;protein_id=HJH9163842.1;transl_table=11 DALFDJ020000011.1 tpg gene 30374 30901 . + . ID=gene-O5D79_002360;Name=O5D79_002360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002360 DALFDJ020000011.1 Protein Homology CDS 30374 30901 . + 0 ID=cds-HJH9163843.1;Parent=gene-O5D79_002360;Dbxref=NCBI_GP:HJH9163843.1;Name=HJH9163843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461724.1;locus_tag=O5D79_002360;product=rhodanese family protein;protein_id=HJH9163843.1;transl_table=11 DALFDJ020000011.1 tpg gene 30980 31159 . + . ID=gene-O5D79_002361;Name=O5D79_002361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002361 DALFDJ020000011.1 Protein Homology CDS 30980 31159 . + 0 ID=cds-HJH9163844.1;Parent=gene-O5D79_002361;Dbxref=NCBI_GP:HJH9163844.1;Name=HJH9163844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494935.1;locus_tag=O5D79_002361;product=hypothetical protein;protein_id=HJH9163844.1;transl_table=11 DALFDJ020000011.1 tpg gene 31249 31650 . - . ID=gene-O5D79_002362;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=O5D79_002362 DALFDJ020000011.1 Protein Homology CDS 31249 31650 . - 0 ID=cds-HJH9163845.1;Parent=gene-O5D79_002362;Dbxref=NCBI_GP:HJH9163845.1;Name=HJH9163845.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461725.1;locus_tag=O5D79_002362;product=DNA-binding protein StpA;protein_id=HJH9163845.1;transl_table=11 DALFDJ020000011.1 tpg gene 32549 32998 . + . ID=gene-O5D79_002363;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=O5D79_002363 DALFDJ020000011.1 Protein Homology CDS 32549 32998 . + 0 ID=cds-HJH9163846.1;Parent=gene-O5D79_002363;Dbxref=NCBI_GP:HJH9163846.1;Name=HJH9163846.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=O5D79_002363;product=L-alanine exporter AlaE;protein_id=HJH9163846.1;transl_table=11 DALFDJ020000011.1 tpg gene 33033 33383 . - . ID=gene-O5D79_002364;Name=O5D79_002364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002364 DALFDJ020000011.1 Protein Homology CDS 33033 33383 . - 0 ID=cds-HJH9163847.1;Parent=gene-O5D79_002364;Dbxref=NCBI_GP:HJH9163847.1;Name=HJH9163847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461727.1;locus_tag=O5D79_002364;product=DUF2002 family protein;protein_id=HJH9163847.1;transl_table=11 DALFDJ020000011.1 tpg gene 33545 33871 . + . ID=gene-O5D79_002365;Name=O5D79_002365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002365 DALFDJ020000011.1 Protein Homology CDS 33545 33871 . + 0 ID=cds-HJH9163848.1;Parent=gene-O5D79_002365;Dbxref=NCBI_GP:HJH9163848.1;Name=HJH9163848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528627.1;locus_tag=O5D79_002365;product=DUF883 domain-containing protein;protein_id=HJH9163848.1;transl_table=11 DALFDJ020000011.1 tpg gene 33955 35289 . - . ID=gene-O5D79_002366;Name=O5D79_002366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002366 DALFDJ020000011.1 Protein Homology CDS 33955 35289 . - 0 ID=cds-HJH9163849.1;Parent=gene-O5D79_002366;Dbxref=NCBI_GP:HJH9163849.1;Name=HJH9163849.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461729.1;locus_tag=O5D79_002366;product=PLP-dependent aminotransferase family protein;protein_id=HJH9163849.1;transl_table=11 DALFDJ020000011.1 tpg gene 35378 35809 . + . ID=gene-O5D79_002367;Name=O5D79_002367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002367 DALFDJ020000011.1 Protein Homology CDS 35378 35809 . + 0 ID=cds-HJH9163850.1;Parent=gene-O5D79_002367;Dbxref=NCBI_GP:HJH9163850.1;Name=HJH9163850.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461730.1;locus_tag=O5D79_002367;product=carboxymuconolactone decarboxylase family protein;protein_id=HJH9163850.1;transl_table=11 DALFDJ020000011.1 tpg gene 36081 36326 . + . ID=gene-O5D79_002368;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=O5D79_002368 DALFDJ020000011.1 Protein Homology CDS 36081 36326 . + 0 ID=cds-HJH9163851.1;Parent=gene-O5D79_002368;Dbxref=NCBI_GP:HJH9163851.1;Name=HJH9163851.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461731.1;locus_tag=O5D79_002368;product=glutaredoxin-like protein NrdH;protein_id=HJH9163851.1;transl_table=11 DALFDJ020000011.1 tpg gene 36323 36733 . + . ID=gene-O5D79_002369;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=O5D79_002369 DALFDJ020000011.1 Protein Homology CDS 36323 36733 . + 0 ID=cds-HJH9163852.1;Parent=gene-O5D79_002369;Dbxref=NCBI_GP:HJH9163852.1;Name=HJH9163852.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461732.1;locus_tag=O5D79_002369;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=HJH9163852.1;transl_table=11 DALFDJ020000011.1 tpg gene 36706 38850 . + . ID=gene-O5D79_002370;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=O5D79_002370 DALFDJ020000011.1 Protein Homology CDS 36706 38850 . + 0 ID=cds-HJH9163853.1;Parent=gene-O5D79_002370;Dbxref=NCBI_GP:HJH9163853.1;Name=HJH9163853.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461733.1;locus_tag=O5D79_002370;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=HJH9163853.1;transl_table=11 DALFDJ020000011.1 tpg gene 38861 39820 . + . ID=gene-O5D79_002371;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=O5D79_002371 DALFDJ020000011.1 Protein Homology CDS 38861 39820 . + 0 ID=cds-HJH9163854.1;Parent=gene-O5D79_002371;Dbxref=NCBI_GP:HJH9163854.1;Name=HJH9163854.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461734.1;locus_tag=O5D79_002371;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=HJH9163854.1;transl_table=11 DALFDJ020000011.1 tpg gene 40175 41377 . + . ID=gene-O5D79_002372;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=O5D79_002372 DALFDJ020000011.1 Protein Homology CDS 40175 41377 . + 0 ID=cds-HJH9163855.1;Parent=gene-O5D79_002372;Dbxref=NCBI_GP:HJH9163855.1;Name=HJH9163855.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=O5D79_002372;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=HJH9163855.1;transl_table=11 DALFDJ020000011.1 tpg gene 41370 42434 . + . ID=gene-O5D79_002373;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=O5D79_002373 DALFDJ020000011.1 Protein Homology CDS 41370 42434 . + 0 ID=cds-HJH9163856.1;Parent=gene-O5D79_002373;Dbxref=NCBI_GP:HJH9163856.1;Name=HJH9163856.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461736.1;locus_tag=O5D79_002373;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=HJH9163856.1;transl_table=11 DALFDJ020000011.1 tpg gene 42504 43499 . + . ID=gene-O5D79_002374;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=O5D79_002374 DALFDJ020000011.1 Protein Homology CDS 42504 43499 . + 0 ID=cds-HJH9163857.1;Parent=gene-O5D79_002374;Dbxref=NCBI_GP:HJH9163857.1;Name=HJH9163857.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461737.1;locus_tag=O5D79_002374;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=HJH9163857.1;transl_table=11 DALFDJ020000011.1 tpg gene 43664 44848 . + . ID=gene-O5D79_002375;Name=O5D79_002375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002375 DALFDJ020000011.1 Protein Homology CDS 43664 44848 . + 0 ID=cds-HJH9163858.1;Parent=gene-O5D79_002375;Dbxref=NCBI_GP:HJH9163858.1;Name=HJH9163858.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461738.1;locus_tag=O5D79_002375;product=MFS transporter;protein_id=HJH9163858.1;transl_table=11 DALFDJ020000011.1 tpg gene 45345 45875 . + . ID=gene-O5D79_002376;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=O5D79_002376 DALFDJ020000011.1 Protein Homology CDS 45345 45875 . + 0 ID=cds-HJH9163859.1;Parent=gene-O5D79_002376;Dbxref=NCBI_GP:HJH9163859.1;Name=HJH9163859.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461739.1;locus_tag=O5D79_002376;product=transcriptional repressor MprA;protein_id=HJH9163859.1;transl_table=11 DALFDJ020000011.1 tpg gene 46002 47174 . + . ID=gene-O5D79_002377;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=O5D79_002377 DALFDJ020000011.1 Protein Homology CDS 46002 47174 . + 0 ID=cds-HJH9163860.1;Parent=gene-O5D79_002377;Dbxref=NCBI_GP:HJH9163860.1;Name=HJH9163860.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=O5D79_002377;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=HJH9163860.1;transl_table=11 DALFDJ020000011.1 tpg gene 47191 48729 . + . ID=gene-O5D79_002378;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=O5D79_002378 DALFDJ020000011.1 Protein Homology CDS 47191 48729 . + 0 ID=cds-HJH9163861.1;Parent=gene-O5D79_002378;Dbxref=NCBI_GP:HJH9163861.1;Name=HJH9163861.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461741.1;locus_tag=O5D79_002378;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=HJH9163861.1;transl_table=11 DALFDJ020000011.1 tpg gene 48778 50148 . - . ID=gene-O5D79_002379;Name=O5D79_002379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002379 DALFDJ020000011.1 Protein Homology CDS 48778 50148 . - 0 ID=cds-HJH9163862.1;Parent=gene-O5D79_002379;Dbxref=NCBI_GP:HJH9163862.1;Name=HJH9163862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461742.1;locus_tag=O5D79_002379;product=carbohydrate porin;protein_id=HJH9163862.1;transl_table=11 DALFDJ020000011.1 tpg gene 50494 51009 . - . ID=gene-O5D79_002380;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=O5D79_002380 DALFDJ020000011.1 Protein Homology CDS 50494 51009 . - 0 ID=cds-HJH9163863.1;Parent=gene-O5D79_002380;Dbxref=NCBI_GP:HJH9163863.1;Name=HJH9163863.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=O5D79_002380;product=S-ribosylhomocysteine lyase;protein_id=HJH9163863.1;transl_table=11 DALFDJ020000011.1 tpg gene 51159 52715 . - . ID=gene-O5D79_002381;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=O5D79_002381 DALFDJ020000011.1 Protein Homology CDS 51159 52715 . - 0 ID=cds-HJH9163864.1;Parent=gene-O5D79_002381;Dbxref=NCBI_GP:HJH9163864.1;Name=HJH9163864.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=O5D79_002381;product=glutamate--cysteine ligase;protein_id=HJH9163864.1;transl_table=11 DALFDJ020000011.1 tpg gene 52792 53217 . - . ID=gene-O5D79_002382;Name=O5D79_002382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002382 DALFDJ020000011.1 Protein Homology CDS 52792 53217 . - 0 ID=cds-HJH9163865.1;Parent=gene-O5D79_002382;Dbxref=NCBI_GP:HJH9163865.1;Name=HJH9163865.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461745.1;locus_tag=O5D79_002382;product=YqaA family protein;protein_id=HJH9163865.1;transl_table=11 DALFDJ020000011.1 tpg gene 53214 53780 . - . ID=gene-O5D79_002383;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=O5D79_002383 DALFDJ020000011.1 Protein Homology CDS 53214 53780 . - 0 ID=cds-HJH9163866.1;Parent=gene-O5D79_002383;Dbxref=NCBI_GP:HJH9163866.1;Name=HJH9163866.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461746.1;locus_tag=O5D79_002383;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=HJH9163866.1;transl_table=11 DALFDJ020000011.1 tpg gene 54017 54093 . - . ID=gene-O5D79_002384;Name=O5D79_002384;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_002384 DALFDJ020000011.1 tRNAscan-SE tRNA 54017 54093 . - . ID=rna-O5D79_002384;Parent=gene-O5D79_002384;anticodon=(pos:complement(54057..54059));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002384;product=tRNA-Arg DALFDJ020000011.1 tRNAscan-SE exon 54017 54093 . - . ID=exon-O5D79_002384-1;Parent=rna-O5D79_002384;anticodon=(pos:complement(54057..54059));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002384;product=tRNA-Arg DALFDJ020000011.1 tpg gene 54287 54363 . - . ID=gene-O5D79_002385;Name=O5D79_002385;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_002385 DALFDJ020000011.1 tRNAscan-SE tRNA 54287 54363 . - . ID=rna-O5D79_002385;Parent=gene-O5D79_002385;anticodon=(pos:complement(54327..54329));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002385;product=tRNA-Arg DALFDJ020000011.1 tRNAscan-SE exon 54287 54363 . - . ID=exon-O5D79_002385-1;Parent=rna-O5D79_002385;anticodon=(pos:complement(54327..54329));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002385;product=tRNA-Arg DALFDJ020000011.1 tpg gene 54426 54502 . - . ID=gene-O5D79_002386;Name=O5D79_002386;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_002386 DALFDJ020000011.1 tRNAscan-SE tRNA 54426 54502 . - . ID=rna-O5D79_002386;Parent=gene-O5D79_002386;anticodon=(pos:complement(54466..54468));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002386;product=tRNA-Arg DALFDJ020000011.1 tRNAscan-SE exon 54426 54502 . - . ID=exon-O5D79_002386-1;Parent=rna-O5D79_002386;anticodon=(pos:complement(54466..54468));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002386;product=tRNA-Arg DALFDJ020000011.1 tpg gene 54564 54640 . - . ID=gene-O5D79_002387;Name=O5D79_002387;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_002387 DALFDJ020000011.1 tRNAscan-SE tRNA 54564 54640 . - . ID=rna-O5D79_002387;Parent=gene-O5D79_002387;anticodon=(pos:complement(54604..54606));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002387;product=tRNA-Arg DALFDJ020000011.1 tRNAscan-SE exon 54564 54640 . - . ID=exon-O5D79_002387-1;Parent=rna-O5D79_002387;anticodon=(pos:complement(54604..54606));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002387;product=tRNA-Arg DALFDJ020000011.1 tpg gene 54644 54736 . - . ID=gene-O5D79_002388;Name=O5D79_002388;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_002388 DALFDJ020000011.1 tRNAscan-SE tRNA 54644 54736 . - . ID=rna-O5D79_002388;Parent=gene-O5D79_002388;anticodon=(pos:complement(54700..54702));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002388;product=tRNA-Ser DALFDJ020000011.1 tRNAscan-SE exon 54644 54736 . - . ID=exon-O5D79_002388-1;Parent=rna-O5D79_002388;anticodon=(pos:complement(54700..54702));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002388;product=tRNA-Ser DALFDJ020000011.1 tpg gene 55040 55225 . - . ID=gene-O5D79_002389;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=O5D79_002389 DALFDJ020000011.1 Protein Homology CDS 55040 55225 . - 0 ID=cds-HJH9163867.1;Parent=gene-O5D79_002389;Dbxref=NCBI_GP:HJH9163867.1;Name=HJH9163867.1;Ontology_term=GO:0006109,GO:0006402,GO:0003723;gbkey=CDS;gene=csrA;go_function=RNA binding|0003723||IEA;go_process=regulation of carbohydrate metabolic process|0006109||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=O5D79_002389;product=carbon storage regulator CsrA;protein_id=HJH9163867.1;transl_table=11 DALFDJ020000011.1 tpg gene 55460 58090 . - . ID=gene-O5D79_002390;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=O5D79_002390 DALFDJ020000011.1 Protein Homology CDS 55460 58090 . - 0 ID=cds-HJH9163868.1;Parent=gene-O5D79_002390;Dbxref=NCBI_GP:HJH9163868.1;Name=HJH9163868.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461748.1;locus_tag=O5D79_002390;product=alanine--tRNA ligase;protein_id=HJH9163868.1;transl_table=11 DALFDJ020000011.1 tpg gene 58326 58826 . - . ID=gene-O5D79_002391;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=O5D79_002391 DALFDJ020000011.1 Protein Homology CDS 58326 58826 . - 0 ID=cds-HJH9163869.1;Parent=gene-O5D79_002391;Dbxref=NCBI_GP:HJH9163869.1;Name=HJH9163869.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461749.1;locus_tag=O5D79_002391;product=recombination regulator RecX;protein_id=HJH9163869.1;transl_table=11 DALFDJ020000011.1 tpg gene 58943 60004 . - . ID=gene-O5D79_002392;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=O5D79_002392 DALFDJ020000011.1 Protein Homology CDS 58943 60004 . - 0 ID=cds-HJH9163870.1;Parent=gene-O5D79_002392;Dbxref=NCBI_GP:HJH9163870.1;Name=HJH9163870.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461750.1;locus_tag=O5D79_002392;product=recombinase RecA;protein_id=HJH9163870.1;transl_table=11 DALFDJ020000011.1 tpg gene 60089 60586 . - . ID=gene-O5D79_002393;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=O5D79_002393 DALFDJ020000011.1 Protein Homology CDS 60089 60586 . - 0 ID=cds-HJH9163871.1;Parent=gene-O5D79_002393;Dbxref=NCBI_GP:HJH9163871.1;Name=HJH9163871.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461751.1;locus_tag=O5D79_002393;product=nicotinamide-nucleotide amidase;protein_id=HJH9163871.1;transl_table=11 DALFDJ020000011.1 tpg gene 60782 61027 . + . ID=gene-O5D79_002394;Name=O5D79_002394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002394 DALFDJ020000011.1 Protein Homology CDS 60782 61027 . + 0 ID=cds-HJH9163872.1;Parent=gene-O5D79_002394;Dbxref=NCBI_GP:HJH9163872.1;Name=HJH9163872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053775.1;locus_tag=O5D79_002394;product=hypothetical protein;protein_id=HJH9163872.1;transl_table=11 DALFDJ020000011.1 tpg gene 61065 62144 . - . ID=gene-O5D79_002395;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=O5D79_002395 DALFDJ020000011.1 Protein Homology CDS 61065 62144 . - 0 ID=cds-HJH9163873.1;Parent=gene-O5D79_002395;Dbxref=NCBI_GP:HJH9163873.1;Name=HJH9163873.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461752.1;locus_tag=O5D79_002395;product=lytic murein transglycosylase B;protein_id=HJH9163873.1;transl_table=11 DALFDJ020000011.1 tpg gene 62397 62960 . + . ID=gene-O5D79_002396;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=O5D79_002396 DALFDJ020000011.1 Protein Homology CDS 62397 62960 . + 0 ID=cds-HJH9163874.1;Parent=gene-O5D79_002396;Dbxref=NCBI_GP:HJH9163874.1;Name=HJH9163874.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461753.1;locus_tag=O5D79_002396;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=HJH9163874.1;transl_table=11 DALFDJ020000011.1 tpg gene 62957 63928 . + . ID=gene-O5D79_002397;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=O5D79_002397 DALFDJ020000011.1 Protein Homology CDS 62957 63928 . + 0 ID=cds-HJH9163875.1;Parent=gene-O5D79_002397;Dbxref=NCBI_GP:HJH9163875.1;Name=HJH9163875.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=O5D79_002397;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=HJH9163875.1;transl_table=11 DALFDJ020000011.1 tpg gene 63940 64302 . + . ID=gene-O5D79_002398;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=O5D79_002398 DALFDJ020000011.1 Protein Homology CDS 63940 64302 . + 0 ID=cds-HJH9163876.1;Parent=gene-O5D79_002398;Dbxref=NCBI_GP:HJH9163876.1;Name=HJH9163876.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=O5D79_002398;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=HJH9163876.1;transl_table=11 DALFDJ020000011.1 tpg gene 64314 65093 . + . ID=gene-O5D79_002399;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=O5D79_002399 DALFDJ020000011.1 Protein Homology CDS 64314 65093 . + 0 ID=cds-HJH9163877.1;Parent=gene-O5D79_002399;Dbxref=NCBI_GP:HJH9163877.1;Name=HJH9163877.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=O5D79_002399;product=sorbitol-6-phosphate dehydrogenase;protein_id=HJH9163877.1;transl_table=11 DALFDJ020000011.1 tpg gene 65170 65529 . + . ID=gene-O5D79_002400;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=O5D79_002400 DALFDJ020000011.1 Protein Homology CDS 65170 65529 . + 0 ID=cds-HJH9163878.1;Parent=gene-O5D79_002400;Dbxref=NCBI_GP:HJH9163878.1;Name=HJH9163878.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461757.1;locus_tag=O5D79_002400;product=transcriptional regulator GutM;protein_id=HJH9163878.1;transl_table=11 DALFDJ020000011.1 tpg gene 65727 66500 . + . ID=gene-O5D79_002401;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=O5D79_002401 DALFDJ020000011.1 Protein Homology CDS 65727 66500 . + 0 ID=cds-HJH9163879.1;Parent=gene-O5D79_002401;Dbxref=NCBI_GP:HJH9163879.1;Name=HJH9163879.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461758.1;locus_tag=O5D79_002401;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=HJH9163879.1;transl_table=11 DALFDJ020000011.1 tpg gene 66493 67458 . + . ID=gene-O5D79_002402;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=O5D79_002402 DALFDJ020000011.1 Protein Homology CDS 66493 67458 . + 0 ID=cds-HJH9163880.1;Parent=gene-O5D79_002402;Dbxref=NCBI_GP:HJH9163880.1;Name=HJH9163880.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=O5D79_002402;product=arabinose-5-phosphate isomerase GutQ;protein_id=HJH9163880.1;transl_table=11 DALFDJ020000011.1 tpg gene 67455 68975 . - . ID=gene-O5D79_002403;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=O5D79_002403 DALFDJ020000011.1 Protein Homology CDS 67455 68975 . - 0 ID=cds-HJH9163881.1;Parent=gene-O5D79_002403;Dbxref=NCBI_GP:HJH9163881.1;Name=HJH9163881.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=O5D79_002403;product=nitric oxide reductase transcriptional regulator NorR;protein_id=HJH9163881.1;transl_table=11 DALFDJ020000011.1 tpg gene 69161 70600 . + . ID=gene-O5D79_002404;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=O5D79_002404 DALFDJ020000011.1 Protein Homology CDS 69161 70600 . + 0 ID=cds-HJH9163882.1;Parent=gene-O5D79_002404;Dbxref=NCBI_GP:HJH9163882.1;Name=HJH9163882.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461761.1;locus_tag=O5D79_002404;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=HJH9163882.1;transl_table=11 DALFDJ020000011.1 tpg gene 70597 71730 . + . ID=gene-O5D79_002405;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=O5D79_002405 DALFDJ020000011.1 Protein Homology CDS 70597 71730 . + 0 ID=cds-HJH9163883.1;Parent=gene-O5D79_002405;Dbxref=NCBI_GP:HJH9163883.1;Name=HJH9163883.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461762.1;locus_tag=O5D79_002405;product=NADH:flavorubredoxin reductase NorW;protein_id=HJH9163883.1;transl_table=11 DALFDJ020000011.1 tpg gene 71827 74067 . - . ID=gene-O5D79_002406;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=O5D79_002406 DALFDJ020000011.1 Protein Homology CDS 71827 74067 . - 0 ID=cds-HJH9163884.1;Parent=gene-O5D79_002406;Dbxref=NCBI_GP:HJH9163884.1;Name=HJH9163884.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461763.1;locus_tag=O5D79_002406;product=carbamoyltransferase HypF;protein_id=HJH9163884.1;transl_table=11 DALFDJ020000011.1 tpg gene 74213 74758 . - . ID=gene-O5D79_002407;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=O5D79_002407 DALFDJ020000011.1 Protein Homology CDS 74213 74758 . - 0 ID=cds-HJH9163885.1;Parent=gene-O5D79_002407;Dbxref=NCBI_GP:HJH9163885.1;Name=HJH9163885.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461764.1;locus_tag=O5D79_002407;product=electron transport protein HydN;protein_id=HJH9163885.1;transl_table=11 DALFDJ020000011.1 tpg gene 74959 75768 . - . ID=gene-O5D79_002408;Name=O5D79_002408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002408 DALFDJ020000011.1 Protein Homology CDS 74959 75768 . - 0 ID=cds-HJH9163886.1;Parent=gene-O5D79_002408;Dbxref=NCBI_GP:HJH9163886.1;Name=HJH9163886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461765.1;locus_tag=O5D79_002408;product=hypothetical protein;protein_id=HJH9163886.1;transl_table=11 DALFDJ020000011.1 tpg gene 75795 76265 . - . ID=gene-O5D79_002409;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=O5D79_002409 DALFDJ020000011.1 Protein Homology CDS 75795 76265 . - 0 ID=cds-HJH9163887.1;Parent=gene-O5D79_002409;Dbxref=NCBI_GP:HJH9163887.1;Name=HJH9163887.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461766.1;locus_tag=O5D79_002409;product=hydrogenase maturation peptidase HycI;protein_id=HJH9163887.1;transl_table=11 DALFDJ020000011.1 tpg gene 76258 76668 . - . ID=gene-O5D79_002410;Name=O5D79_002410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002410 DALFDJ020000011.1 Protein Homology CDS 76258 76668 . - 0 ID=cds-HJH9163888.1;Parent=gene-O5D79_002410;Dbxref=NCBI_GP:HJH9163888.1;Name=HJH9163888.1;Ontology_term=GO:0065003;gbkey=CDS;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461767.1;locus_tag=O5D79_002410;product=formate hydrogenlyase maturation HycH family protein;protein_id=HJH9163888.1;transl_table=11 DALFDJ020000011.1 tpg gene 76665 77432 . - . ID=gene-O5D79_002411;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=O5D79_002411 DALFDJ020000011.1 Protein Homology CDS 76665 77432 . - 0 ID=cds-HJH9163889.1;Parent=gene-O5D79_002411;Dbxref=NCBI_GP:HJH9163889.1;Name=HJH9163889.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461768.1;locus_tag=O5D79_002411;product=formate hydrogenlyase subunit HycG;protein_id=HJH9163889.1;transl_table=11 DALFDJ020000011.1 tpg gene 77432 77974 . - . ID=gene-O5D79_002412;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=O5D79_002412 DALFDJ020000011.1 Protein Homology CDS 77432 77974 . - 0 ID=cds-HJH9163890.1;Parent=gene-O5D79_002412;Dbxref=NCBI_GP:HJH9163890.1;Name=HJH9163890.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461769.1;locus_tag=O5D79_002412;product=formate hydrogenlyase subunit HycF;protein_id=HJH9163890.1;transl_table=11 DALFDJ020000011.1 tpg gene 77984 79693 . - . ID=gene-O5D79_002413;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=O5D79_002413 DALFDJ020000011.1 Protein Homology CDS 77984 79693 . - 0 ID=cds-HJH9163891.1;Parent=gene-O5D79_002413;Dbxref=NCBI_GP:HJH9163891.1;Name=HJH9163891.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=O5D79_002413;product=formate hydrogenlyase subunit HycE;protein_id=HJH9163891.1;transl_table=11 DALFDJ020000011.1 tpg gene 79711 80634 . - . ID=gene-O5D79_002414;Name=O5D79_002414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002414 DALFDJ020000011.1 Protein Homology CDS 79711 80634 . - 0 ID=cds-HJH9163892.1;Parent=gene-O5D79_002414;Dbxref=NCBI_GP:HJH9163892.1;Name=HJH9163892.1;Ontology_term=GO:0022900,GO:0016491,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461771.1;locus_tag=O5D79_002414;product=respiratory chain complex I subunit 1 family protein;protein_id=HJH9163892.1;transl_table=11 DALFDJ020000011.1 tpg gene 80637 82463 . - . ID=gene-O5D79_002415;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=O5D79_002415 DALFDJ020000011.1 Protein Homology CDS 80637 82463 . - 0 ID=cds-HJH9163893.1;Parent=gene-O5D79_002415;Dbxref=NCBI_GP:HJH9163893.1;Name=HJH9163893.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461772.2;locus_tag=O5D79_002415;product=formate hydrogenlyase subunit 3;protein_id=HJH9163893.1;transl_table=11 DALFDJ020000011.1 tpg gene 82463 83071 . - . ID=gene-O5D79_002416;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=O5D79_002416 DALFDJ020000011.1 Protein Homology CDS 82463 83071 . - 0 ID=cds-HJH9163894.1;Parent=gene-O5D79_002416;Dbxref=NCBI_GP:HJH9163894.1;Name=HJH9163894.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461773.1;locus_tag=O5D79_002416;product=formate hydrogenlyase subunit HycB;protein_id=HJH9163894.1;transl_table=11 DALFDJ020000011.1 tpg gene 83217 83678 . - . ID=gene-O5D79_002417;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=O5D79_002417 DALFDJ020000011.1 Protein Homology CDS 83217 83678 . - 0 ID=cds-HJH9163895.1;Parent=gene-O5D79_002417;Dbxref=NCBI_GP:HJH9163895.1;Name=HJH9163895.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461774.1;locus_tag=O5D79_002417;product=formate hydrogenlyase regulator HycA;protein_id=HJH9163895.1;transl_table=11 DALFDJ020000011.1 tpg gene 83888 84244 . + . ID=gene-O5D79_002418;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=O5D79_002418 DALFDJ020000011.1 Protein Homology CDS 83888 84244 . + 0 ID=cds-HJH9163896.1;Parent=gene-O5D79_002418;Dbxref=NCBI_GP:HJH9163896.1;Name=HJH9163896.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461775.1;locus_tag=O5D79_002418;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=HJH9163896.1;transl_table=11 DALFDJ020000011.1 tpg gene 84313 85185 . + . ID=gene-O5D79_002419;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=O5D79_002419 DALFDJ020000011.1 Protein Homology CDS 84313 85185 . + 0 ID=cds-HJH9163897.1;Parent=gene-O5D79_002419;Dbxref=NCBI_GP:HJH9163897.1;Name=HJH9163897.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=O5D79_002419;product=hydrogenase nickel incorporation protein HypB;protein_id=HJH9163897.1;transl_table=11 DALFDJ020000011.1 tpg gene 85176 85448 . + . ID=gene-O5D79_002420;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=O5D79_002420 DALFDJ020000011.1 Protein Homology CDS 85176 85448 . + 0 ID=cds-HJH9163898.1;Parent=gene-O5D79_002420;Dbxref=NCBI_GP:HJH9163898.1;Name=HJH9163898.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461777.1;locus_tag=O5D79_002420;product=hydrogenase 3 maturation protein HypC;protein_id=HJH9163898.1;transl_table=11 DALFDJ020000011.1 tpg gene 85448 86569 . + . ID=gene-O5D79_002421;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=O5D79_002421 DALFDJ020000011.1 Protein Homology CDS 85448 86569 . + 0 ID=cds-HJH9163899.1;Parent=gene-O5D79_002421;Dbxref=NCBI_GP:HJH9163899.1;Name=HJH9163899.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461778.2;locus_tag=O5D79_002421;product=hydrogenase formation protein HypD;protein_id=HJH9163899.1;transl_table=11 DALFDJ020000011.1 tpg gene 86566 87576 . + . ID=gene-O5D79_002422;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=O5D79_002422 DALFDJ020000011.1 Protein Homology CDS 86566 87576 . + 0 ID=cds-HJH9163900.1;Parent=gene-O5D79_002422;Dbxref=NCBI_GP:HJH9163900.1;Name=HJH9163900.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=O5D79_002422;product=hydrogenase expression/formation protein HypE;protein_id=HJH9163900.1;transl_table=11 DALFDJ020000011.1 tpg gene 87795 89873 . + . ID=gene-O5D79_002423;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=O5D79_002423 DALFDJ020000011.1 Protein Homology CDS 87795 89873 . + 0 ID=cds-HJH9163901.1;Parent=gene-O5D79_002423;Dbxref=NCBI_GP:HJH9163901.1;Name=HJH9163901.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461780.1;locus_tag=O5D79_002423;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=HJH9163901.1;transl_table=11 DALFDJ020000011.1 tpg gene 89935 90279 . - . ID=gene-O5D79_002424;Name=O5D79_002424;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002424 DALFDJ020000011.1 Protein Homology CDS 89935 90279 . - 0 ID=cds-HJH9163902.1;Parent=gene-O5D79_002424;Dbxref=NCBI_GP:HJH9163902.1;Name=HJH9163902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461781.1;locus_tag=O5D79_002424;product=nitrous oxide-stimulated promoter family protein;protein_id=HJH9163902.1;transl_table=11 DALFDJ020000011.1 tpg gene 90461 91378 . + . ID=gene-O5D79_002425;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=O5D79_002425 DALFDJ020000011.1 Protein Homology CDS 90461 91378 . + 0 ID=cds-HJH9163903.1;Parent=gene-O5D79_002425;Dbxref=NCBI_GP:HJH9163903.1;Name=HJH9163903.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461782.1;locus_tag=O5D79_002425;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=HJH9163903.1;transl_table=11 DALFDJ020000011.1 tpg gene 91375 92196 . + . ID=gene-O5D79_002426;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=O5D79_002426 DALFDJ020000011.1 Protein Homology CDS 91375 92196 . + 0 ID=cds-HJH9163904.1;Parent=gene-O5D79_002426;Dbxref=NCBI_GP:HJH9163904.1;Name=HJH9163904.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461783.1;locus_tag=O5D79_002426;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=HJH9163904.1;transl_table=11 DALFDJ020000011.1 tpg gene 92193 93053 . + . ID=gene-O5D79_002427;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=O5D79_002427 DALFDJ020000011.1 Protein Homology CDS 92193 93053 . + 0 ID=cds-HJH9163905.1;Parent=gene-O5D79_002427;Dbxref=NCBI_GP:HJH9163905.1;Name=HJH9163905.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461784.1;locus_tag=O5D79_002427;product=iron/manganese ABC transporter permease subunit SitC;protein_id=HJH9163905.1;transl_table=11 DALFDJ020000011.1 tpg gene 93044 93892 . + . ID=gene-O5D79_002428;Name=sitD;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=O5D79_002428 DALFDJ020000011.1 Protein Homology CDS 93044 93892 . + 0 ID=cds-HJH9163906.1;Parent=gene-O5D79_002428;Dbxref=NCBI_GP:HJH9163906.1;Name=HJH9163906.1;gbkey=CDS;gene=sitD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461785.1;locus_tag=O5D79_002428;product=iron/manganese ABC transporter permease subunit SitD;protein_id=HJH9163906.1;transl_table=11 DALFDJ020000011.1 tpg gene 93991 94899 . - . ID=gene-O5D79_002429;Name=avrA;gbkey=Gene;gene=avrA;gene_biotype=protein_coding;locus_tag=O5D79_002429 DALFDJ020000011.1 Protein Homology CDS 93991 94899 . - 0 ID=cds-HJH9163907.1;Parent=gene-O5D79_002429;Dbxref=NCBI_GP:HJH9163907.1;Name=HJH9163907.1;gbkey=CDS;gene=avrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461786.1;locus_tag=O5D79_002429;product=type III secretion system YopJ family effector AvrA;protein_id=HJH9163907.1;transl_table=11 DALFDJ020000011.1 tpg gene 95060 95815 . - . ID=gene-O5D79_002430;Name=sprB;gbkey=Gene;gene=sprB;gene_biotype=protein_coding;locus_tag=O5D79_002430 DALFDJ020000011.1 Protein Homology CDS 95060 95815 . - 0 ID=cds-HJH9163908.1;Parent=gene-O5D79_002430;Dbxref=NCBI_GP:HJH9163908.1;Name=HJH9163908.1;gbkey=CDS;gene=sprB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461787.1;locus_tag=O5D79_002430;product=transcriptional regulator SprB;protein_id=HJH9163908.1;transl_table=11 DALFDJ020000011.1 tpg gene 96200 97087 . - . ID=gene-O5D79_002431;Name=hilC;gbkey=Gene;gene=hilC;gene_biotype=protein_coding;locus_tag=O5D79_002431 DALFDJ020000011.1 Protein Homology CDS 96200 97087 . - 0 ID=cds-HJH9163909.1;Parent=gene-O5D79_002431;Dbxref=NCBI_GP:HJH9163909.1;Name=HJH9163909.1;gbkey=CDS;gene=hilC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461788.1;locus_tag=O5D79_002431;product=invasion transcriptional regulator HilC;protein_id=HJH9163909.1;transl_table=11 DALFDJ020000011.1 tpg gene 97423 97875 . - . ID=gene-O5D79_002432;Name=O5D79_002432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002432 DALFDJ020000011.1 Protein Homology CDS 97423 97875 . - 0 ID=cds-HJH9163910.1;Parent=gene-O5D79_002432;Dbxref=NCBI_GP:HJH9163910.1;Name=HJH9163910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461789.1;locus_tag=O5D79_002432;product=type III secretion system effector protein OrgC;protein_id=HJH9163910.1;transl_table=11 DALFDJ020000011.1 tpg gene 97872 98552 . - . ID=gene-O5D79_002433;Name=orgB;gbkey=Gene;gene=orgB;gene_biotype=protein_coding;locus_tag=O5D79_002433 DALFDJ020000011.1 Protein Homology CDS 97872 98552 . - 0 ID=cds-HJH9163911.1;Parent=gene-O5D79_002433;Dbxref=NCBI_GP:HJH9163911.1;Name=HJH9163911.1;gbkey=CDS;gene=orgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461790.1;locus_tag=O5D79_002433;product=type III secretion system linker protein OrgB;protein_id=HJH9163911.1;transl_table=11 DALFDJ020000011.1 tpg gene 98509 99108 . - . ID=gene-O5D79_002434;Name=orgA;gbkey=Gene;gene=orgA;gene_biotype=protein_coding;locus_tag=O5D79_002434 DALFDJ020000011.1 Protein Homology CDS 98509 99108 . - 0 ID=cds-HJH9163912.1;Parent=gene-O5D79_002434;Dbxref=NCBI_GP:HJH9163912.1;Name=HJH9163912.1;gbkey=CDS;gene=orgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461791.1;locus_tag=O5D79_002434;product=oxygen-regulated invasion protein OrgA;protein_id=HJH9163912.1;transl_table=11 DALFDJ020000011.1 tpg gene 99080 99838 . - . ID=gene-O5D79_002435;Name=prgK;gbkey=Gene;gene=prgK;gene_biotype=protein_coding;locus_tag=O5D79_002435 DALFDJ020000011.1 Protein Homology CDS 99080 99838 . - 0 ID=cds-HJH9163913.1;Parent=gene-O5D79_002435;Dbxref=NCBI_GP:HJH9163913.1;Name=HJH9163913.1;gbkey=CDS;gene=prgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461792.1;locus_tag=O5D79_002435;product=type III secretion system inner membrane ring lipoprotein PrgK;protein_id=HJH9163913.1;transl_table=11 DALFDJ020000011.1 tpg gene 99835 100140 . - . ID=gene-O5D79_002436;Name=prgJ;gbkey=Gene;gene=prgJ;gene_biotype=protein_coding;locus_tag=O5D79_002436 DALFDJ020000011.1 Protein Homology CDS 99835 100140 . - 0 ID=cds-HJH9163914.1;Parent=gene-O5D79_002436;Dbxref=NCBI_GP:HJH9163914.1;Name=HJH9163914.1;gbkey=CDS;gene=prgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461793.1;locus_tag=O5D79_002436;product=type III secretion system inner rod protein PrgJ;protein_id=HJH9163914.1;transl_table=11 DALFDJ020000011.1 tpg gene 100159 100401 . - . ID=gene-O5D79_002437;Name=O5D79_002437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002437 DALFDJ020000011.1 Protein Homology CDS 100159 100401 . - 0 ID=cds-HJH9163915.1;Parent=gene-O5D79_002437;Dbxref=NCBI_GP:HJH9163915.1;Name=HJH9163915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461794.1;locus_tag=O5D79_002437;product=type III secretion system needle complex protein;protein_id=HJH9163915.1;transl_table=11 DALFDJ020000011.1 tpg gene 100426 101604 . - . ID=gene-O5D79_002438;Name=prgH;gbkey=Gene;gene=prgH;gene_biotype=protein_coding;locus_tag=O5D79_002438 DALFDJ020000011.1 Protein Homology CDS 100426 101604 . - 0 ID=cds-HJH9163916.1;Parent=gene-O5D79_002438;Dbxref=NCBI_GP:HJH9163916.1;Name=HJH9163916.1;gbkey=CDS;gene=prgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461795.1;locus_tag=O5D79_002438;product=type III secretion system inner membrane ring protein PrgH;protein_id=HJH9163916.1;transl_table=11 DALFDJ020000011.1 tpg gene 101920 102849 . + . ID=gene-O5D79_002439;Name=hilD;gbkey=Gene;gene=hilD;gene_biotype=protein_coding;locus_tag=O5D79_002439 DALFDJ020000011.1 Protein Homology CDS 101920 102849 . + 0 ID=cds-HJH9163917.1;Parent=gene-O5D79_002439;Dbxref=NCBI_GP:HJH9163917.1;Name=HJH9163917.1;gbkey=CDS;gene=hilD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461796.1;locus_tag=O5D79_002439;product=transcriptional regulator HilD;protein_id=HJH9163917.1;transl_table=11 DALFDJ020000011.1 tpg gene 103939 105600 . + . ID=gene-O5D79_002440;Name=hilA;gbkey=Gene;gene=hilA;gene_biotype=protein_coding;locus_tag=O5D79_002440 DALFDJ020000011.1 Protein Homology CDS 103939 105600 . + 0 ID=cds-HJH9163918.1;Parent=gene-O5D79_002440;Dbxref=NCBI_GP:HJH9163918.1;Name=HJH9163918.1;gbkey=CDS;gene=hilA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461797.1;locus_tag=O5D79_002440;product=transcriptional regulator HilA;protein_id=HJH9163918.1;transl_table=11 DALFDJ020000011.1 tpg gene 105618 106100 . + . ID=gene-O5D79_002441;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=protein_coding;locus_tag=O5D79_002441 DALFDJ020000011.1 Protein Homology CDS 105618 106100 . + 0 ID=cds-HJH9163919.1;Parent=gene-O5D79_002441;Dbxref=NCBI_GP:HJH9163919.1;Name=HJH9163919.1;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461798.1;locus_tag=O5D79_002441;product=SPI-1 type III secretion system invasion protein IagB;protein_id=HJH9163919.1;transl_table=11 DALFDJ020000011.1 tpg gene 106154 107785 . - . ID=gene-O5D79_002442;Name=sptP;gbkey=Gene;gene=sptP;gene_biotype=protein_coding;locus_tag=O5D79_002442 DALFDJ020000011.1 Protein Homology CDS 106154 107785 . - 0 ID=cds-HJH9163920.1;Parent=gene-O5D79_002442;Dbxref=NCBI_GP:HJH9163920.1;Name=HJH9163920.1;gbkey=CDS;gene=sptP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461799.1;locus_tag=O5D79_002442;product=SPI-1 type III secretion system effector GTPase-activating protein SptP;protein_id=HJH9163920.1;transl_table=11 DALFDJ020000011.1 tpg gene 107772 108164 . - . ID=gene-O5D79_002443;Name=sicP;gbkey=Gene;gene=sicP;gene_biotype=protein_coding;locus_tag=O5D79_002443 DALFDJ020000011.1 Protein Homology CDS 107772 108164 . - 0 ID=cds-HJH9163921.1;Parent=gene-O5D79_002443;Dbxref=NCBI_GP:HJH9163921.1;Name=HJH9163921.1;gbkey=CDS;gene=sicP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461800.1;locus_tag=O5D79_002443;product=chaperone SicP;protein_id=HJH9163921.1;transl_table=11 DALFDJ020000011.1 tpg gene 108191 108451 . - . ID=gene-O5D79_002444;Name=O5D79_002444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002444 DALFDJ020000011.1 Protein Homology CDS 108191 108451 . - 0 ID=cds-HJH9163922.1;Parent=gene-O5D79_002444;Dbxref=NCBI_GP:HJH9163922.1;Name=HJH9163922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449260.1;locus_tag=O5D79_002444;product=hypothetical protein;protein_id=HJH9163922.1;transl_table=11 DALFDJ020000011.1 tpg gene 108495 108743 . - . ID=gene-O5D79_002445;Name=O5D79_002445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002445 DALFDJ020000011.1 Protein Homology CDS 108495 108743 . - 0 ID=cds-HJH9163923.1;Parent=gene-O5D79_002445;Dbxref=NCBI_GP:HJH9163923.1;Name=HJH9163923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461802.1;locus_tag=O5D79_002445;product=acyl carrier protein;protein_id=HJH9163923.1;transl_table=11 DALFDJ020000011.1 tpg gene 108762 110819 . - . ID=gene-O5D79_002446;Name=sipA;gbkey=Gene;gene=sipA;gene_biotype=protein_coding;locus_tag=O5D79_002446 DALFDJ020000011.1 Protein Homology CDS 108762 110819 . - 0 ID=cds-HJH9163924.1;Parent=gene-O5D79_002446;Dbxref=NCBI_GP:HJH9163924.1;Name=HJH9163924.1;gbkey=CDS;gene=sipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461803.1;locus_tag=O5D79_002446;product=SPI-1 type III secretion system effector SipA;protein_id=HJH9163924.1;transl_table=11 DALFDJ020000011.1 tpg gene 110838 111869 . - . ID=gene-O5D79_002447;Name=sipD;gbkey=Gene;gene=sipD;gene_biotype=protein_coding;locus_tag=O5D79_002447 DALFDJ020000011.1 Protein Homology CDS 110838 111869 . - 0 ID=cds-HJH9163925.1;Parent=gene-O5D79_002447;Dbxref=NCBI_GP:HJH9163925.1;Name=HJH9163925.1;gbkey=CDS;gene=sipD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461804.1;locus_tag=O5D79_002447;product=SPI-1 type III secretion system needle tip complex protein SipD;protein_id=HJH9163925.1;transl_table=11 DALFDJ020000011.1 tpg gene 111940 113169 . - . ID=gene-O5D79_002448;Name=sipC;gbkey=Gene;gene=sipC;gene_biotype=protein_coding;locus_tag=O5D79_002448 DALFDJ020000011.1 Protein Homology CDS 111940 113169 . - 0 ID=cds-HJH9163926.1;Parent=gene-O5D79_002448;Dbxref=NCBI_GP:HJH9163926.1;Name=HJH9163926.1;gbkey=CDS;gene=sipC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461805.1;locus_tag=O5D79_002448;product=SPI-1 type III secretion system needle tip complex protein SipC;protein_id=HJH9163926.1;transl_table=11 DALFDJ020000011.1 tpg gene 113197 114978 . - . ID=gene-O5D79_002449;Name=sipB;gbkey=Gene;gene=sipB;gene_biotype=protein_coding;locus_tag=O5D79_002449 DALFDJ020000011.1 Protein Homology CDS 113197 114978 . - 0 ID=cds-HJH9163927.1;Parent=gene-O5D79_002449;Dbxref=NCBI_GP:HJH9163927.1;Name=HJH9163927.1;gbkey=CDS;gene=sipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461806.1;locus_tag=O5D79_002449;product=SPI-1 type III secretion system needle tip complex protein SipB;protein_id=HJH9163927.1;transl_table=11 DALFDJ020000011.1 tpg gene 114981 115478 . - . ID=gene-O5D79_002450;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=O5D79_002450 DALFDJ020000011.1 Protein Homology CDS 114981 115478 . - 0 ID=cds-HJH9163928.1;Parent=gene-O5D79_002450;Dbxref=NCBI_GP:HJH9163928.1;Name=HJH9163928.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461807.1;locus_tag=O5D79_002450;product=SycD/LcrH family type III secretion system chaperone SicA;protein_id=HJH9163928.1;transl_table=11 DALFDJ020000011.1 tpg gene 115616 116686 . - . ID=gene-O5D79_002451;Name=spaS;gbkey=Gene;gene=spaS;gene_biotype=protein_coding;locus_tag=O5D79_002451 DALFDJ020000011.1 Protein Homology CDS 115616 116686 . - 0 ID=cds-HJH9163929.1;Parent=gene-O5D79_002451;Dbxref=NCBI_GP:HJH9163929.1;Name=HJH9163929.1;gbkey=CDS;gene=spaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461808.1;locus_tag=O5D79_002451;product=SPI-1 type III secretion system export apparatus protein SpaS;protein_id=HJH9163929.1;transl_table=11 DALFDJ020000011.1 tpg gene 116673 117464 . - . ID=gene-O5D79_002452;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=O5D79_002452 DALFDJ020000011.1 Protein Homology CDS 116673 117464 . - 0 ID=cds-HJH9163930.1;Parent=gene-O5D79_002452;Dbxref=NCBI_GP:HJH9163930.1;Name=HJH9163930.1;gbkey=CDS;gene=spaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461809.1;locus_tag=O5D79_002452;product=SPI-1 type III secretion system export apparatus protein SpaR;protein_id=HJH9163930.1;transl_table=11 DALFDJ020000011.1 tpg gene 117468 117728 . - . ID=gene-O5D79_002453;Name=spaQ;gbkey=Gene;gene=spaQ;gene_biotype=protein_coding;locus_tag=O5D79_002453 DALFDJ020000011.1 Protein Homology CDS 117468 117728 . - 0 ID=cds-HJH9163931.1;Parent=gene-O5D79_002453;Dbxref=NCBI_GP:HJH9163931.1;Name=HJH9163931.1;gbkey=CDS;gene=spaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461810.1;locus_tag=O5D79_002453;product=SPI-1 type III secretion system export apparatus protein SpaQ;protein_id=HJH9163931.1;transl_table=11 DALFDJ020000011.1 tpg gene 117754 118428 . - . ID=gene-O5D79_002454;Name=spaP;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=O5D79_002454 DALFDJ020000011.1 Protein Homology CDS 117754 118428 . - 0 ID=cds-HJH9163932.1;Parent=gene-O5D79_002454;Dbxref=NCBI_GP:HJH9163932.1;Name=HJH9163932.1;gbkey=CDS;gene=spaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461811.1;locus_tag=O5D79_002454;product=SPI-1 type III secretion system export apparatus protein SpaP;protein_id=HJH9163932.1;transl_table=11 DALFDJ020000011.1 tpg gene 118418 119329 . - . ID=gene-O5D79_002455;Name=spaO;gbkey=Gene;gene=spaO;gene_biotype=protein_coding;locus_tag=O5D79_002455 DALFDJ020000011.1 Protein Homology CDS 118418 119329 . - 0 ID=cds-HJH9163933.1;Parent=gene-O5D79_002455;Dbxref=NCBI_GP:HJH9163933.1;Name=HJH9163933.1;gbkey=CDS;gene=spaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461812.1;locus_tag=O5D79_002455;product=SPI-1 type III secretion system protein SpaO;protein_id=HJH9163933.1;transl_table=11 DALFDJ020000011.1 tpg gene 119329 120339 . - . ID=gene-O5D79_002456;Name=spaN;gbkey=Gene;gene=spaN;gene_biotype=protein_coding;locus_tag=O5D79_002456 DALFDJ020000011.1 Protein Homology CDS 119329 120339 . - 0 ID=cds-HJH9163934.1;Parent=gene-O5D79_002456;Dbxref=NCBI_GP:HJH9163934.1;Name=HJH9163934.1;gbkey=CDS;gene=spaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461813.1;locus_tag=O5D79_002456;product=SPI-1 type III secretion system protein SpaN;protein_id=HJH9163934.1;transl_table=11 DALFDJ020000011.1 tpg gene 120339 120782 . - . ID=gene-O5D79_002457;Name=spaM;gbkey=Gene;gene=spaM;gene_biotype=protein_coding;locus_tag=O5D79_002457 DALFDJ020000011.1 Protein Homology CDS 120339 120782 . - 0 ID=cds-HJH9163935.1;Parent=gene-O5D79_002457;Dbxref=NCBI_GP:HJH9163935.1;Name=HJH9163935.1;gbkey=CDS;gene=spaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461814.1;locus_tag=O5D79_002457;product=SPI-1 type III secretion system protein SpaM;protein_id=HJH9163935.1;transl_table=11 DALFDJ020000011.1 tpg gene 120760 122055 . - . ID=gene-O5D79_002458;Name=invC;gbkey=Gene;gene=invC;gene_biotype=protein_coding;locus_tag=O5D79_002458 DALFDJ020000011.1 Protein Homology CDS 120760 122055 . - 0 ID=cds-HJH9163936.1;Parent=gene-O5D79_002458;Dbxref=NCBI_GP:HJH9163936.1;Name=HJH9163936.1;gbkey=CDS;gene=invC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461815.1;locus_tag=O5D79_002458;product=SctN family type III secretion system ATPase InvC;protein_id=HJH9163936.1;transl_table=11 DALFDJ020000011.1 tpg gene 122052 122459 . - . ID=gene-O5D79_002459;Name=spaK;gbkey=Gene;gene=spaK;gene_biotype=protein_coding;locus_tag=O5D79_002459 DALFDJ020000011.1 Protein Homology CDS 122052 122459 . - 0 ID=cds-HJH9163937.1;Parent=gene-O5D79_002459;Dbxref=NCBI_GP:HJH9163937.1;Name=HJH9163937.1;gbkey=CDS;gene=spaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461816.1;locus_tag=O5D79_002459;product=SPI-1 type III secretion system chaperone SpaK;protein_id=HJH9163937.1;transl_table=11 DALFDJ020000011.1 tpg gene 122483 124540 . - . ID=gene-O5D79_002460;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=O5D79_002460 DALFDJ020000011.1 Protein Homology CDS 122483 124540 . - 0 ID=cds-HJH9163938.1;Parent=gene-O5D79_002460;Dbxref=NCBI_GP:HJH9163938.1;Name=HJH9163938.1;gbkey=CDS;gene=invA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461817.1;locus_tag=O5D79_002460;product=type III secretion system export apparatus protein InvA;protein_id=HJH9163938.1;transl_table=11 DALFDJ020000011.1 tpg gene 124565 125683 . - . ID=gene-O5D79_002461;Name=invE;gbkey=Gene;gene=invE;gene_biotype=protein_coding;locus_tag=O5D79_002461 DALFDJ020000011.1 Protein Homology CDS 124565 125683 . - 0 ID=cds-HJH9163939.1;Parent=gene-O5D79_002461;Dbxref=NCBI_GP:HJH9163939.1;Name=HJH9163939.1;gbkey=CDS;gene=invE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461818.1;locus_tag=O5D79_002461;product=type III secretion system gatekeeper InvE;protein_id=HJH9163939.1;transl_table=11 DALFDJ020000011.1 tpg gene 125680 127368 . - . ID=gene-O5D79_002462;Name=invG;gbkey=Gene;gene=invG;gene_biotype=protein_coding;locus_tag=O5D79_002462 DALFDJ020000011.1 Protein Homology CDS 125680 127368 . - 0 ID=cds-HJH9163940.1;Parent=gene-O5D79_002462;Dbxref=NCBI_GP:HJH9163940.1;Name=HJH9163940.1;gbkey=CDS;gene=invG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461819.1;locus_tag=O5D79_002462;product=type III secretion system outer membrane ring protein InvG;protein_id=HJH9163940.1;transl_table=11 DALFDJ020000011.1 tpg gene 127365 128015 . - . ID=gene-O5D79_002463;Name=invF;gbkey=Gene;gene=invF;gene_biotype=protein_coding;locus_tag=O5D79_002463 DALFDJ020000011.1 Protein Homology CDS 127365 128015 . - 0 ID=cds-HJH9163941.1;Parent=gene-O5D79_002463;Dbxref=NCBI_GP:HJH9163941.1;Name=HJH9163941.1;gbkey=CDS;gene=invF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461820.1;locus_tag=O5D79_002463;product=type III secretion system transcriptional activator InvF;protein_id=HJH9163941.1;transl_table=11 DALFDJ020000011.1 tpg gene 128472 128915 . + . ID=gene-O5D79_002464;Name=invH;gbkey=Gene;gene=invH;gene_biotype=protein_coding;locus_tag=O5D79_002464 DALFDJ020000011.1 Protein Homology CDS 128472 128915 . + 0 ID=cds-HJH9163942.1;Parent=gene-O5D79_002464;Dbxref=NCBI_GP:HJH9163942.1;Name=HJH9163942.1;gbkey=CDS;gene=invH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461821.1;locus_tag=O5D79_002464;product=SPI-1 type III secretion system invasion lipoprotein InvH;protein_id=HJH9163942.1;transl_table=11 DALFDJ020000011.1 tpg pseudogene 129319 129497 . + . ID=gene-O5D79_002465;Name=O5D79_002465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_002465;pseudo=true DALFDJ020000011.1 Protein Homology CDS 129319 129497 . + 0 ID=cds-O5D79_002465;Parent=gene-O5D79_002465;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612101.1;locus_tag=O5D79_002465;product=IS3 family transposase;pseudo=true;transl_table=11 DALFDJ020000011.1 tpg gene 129766 130056 . + . ID=gene-O5D79_002466;Name=O5D79_002466;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002466 DALFDJ020000011.1 Protein Homology CDS 129766 130056 . + 0 ID=cds-HJH9163943.1;Parent=gene-O5D79_002466;Dbxref=NCBI_GP:HJH9163943.1;Name=HJH9163943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461825.1;locus_tag=O5D79_002466;product=DUF1778 domain-containing protein;protein_id=HJH9163943.1;transl_table=11 DALFDJ020000011.1 tpg gene 130053 130580 . + . ID=gene-O5D79_002467;Name=O5D79_002467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002467 DALFDJ020000011.1 Protein Homology CDS 130053 130580 . + 0 ID=cds-HJH9163944.1;Parent=gene-O5D79_002467;Dbxref=NCBI_GP:HJH9163944.1;Name=HJH9163944.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461826.1;locus_tag=O5D79_002467;product=GNAT family N-acetyltransferase;protein_id=HJH9163944.1;transl_table=11 DALFDJ020000011.1 tpg pseudogene 130653 130867 . - . ID=gene-O5D79_002468;Name=O5D79_002468;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_002468;pseudo=true DALFDJ020000011.1 Protein Homology CDS 130653 130867 . - 0 ID=cds-O5D79_002468;Parent=gene-O5D79_002468;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011791210.1;locus_tag=O5D79_002468;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 DALFDJ020000011.1 tpg gene 131205 131861 . + . ID=gene-O5D79_002469;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=O5D79_002469 DALFDJ020000011.1 Protein Homology CDS 131205 131861 . + 0 ID=cds-HJH9163945.1;Parent=gene-O5D79_002469;Dbxref=NCBI_GP:HJH9163945.1;Name=HJH9163945.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461828.1;locus_tag=O5D79_002469;product=protein-serine/threonine phosphatase;protein_id=HJH9163945.1;transl_table=11 DALFDJ020000011.1 tpg gene 132032 132553 . - . ID=gene-O5D79_002470;Name=O5D79_002470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002470 DALFDJ020000011.1 Protein Homology CDS 132032 132553 . - 0 ID=cds-HJH9163946.1;Parent=gene-O5D79_002470;Dbxref=NCBI_GP:HJH9163946.1;Name=HJH9163946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=O5D79_002470;product=cytoplasmic protein;protein_id=HJH9163946.1;transl_table=11 DALFDJ020000011.1 tpg gene 132711 135278 . + . ID=gene-O5D79_002471;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=O5D79_002471 DALFDJ020000011.1 Protein Homology CDS 132711 135278 . + 0 ID=cds-HJH9163947.1;Parent=gene-O5D79_002471;Dbxref=NCBI_GP:HJH9163947.1;Name=HJH9163947.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461830.1;locus_tag=O5D79_002471;product=DNA mismatch repair protein MutS;protein_id=HJH9163947.1;transl_table=11 DALFDJ020000011.1 tpg gene 135334 135714 . - . ID=gene-O5D79_002472;Name=O5D79_002472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002472 DALFDJ020000011.1 Protein Homology CDS 135334 135714 . - 0 ID=cds-HJH9163948.1;Parent=gene-O5D79_002472;Dbxref=NCBI_GP:HJH9163948.1;Name=HJH9163948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461831.1;locus_tag=O5D79_002472;product=DUF4440 domain-containing protein;protein_id=HJH9163948.1;transl_table=11 DALFDJ020000011.1 tpg gene 135711 136919 . - . ID=gene-O5D79_002473;Name=O5D79_002473;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002473 DALFDJ020000011.1 Protein Homology CDS 135711 136919 . - 0 ID=cds-HJH9163949.1;Parent=gene-O5D79_002473;Dbxref=NCBI_GP:HJH9163949.1;Name=HJH9163949.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461832.1;locus_tag=O5D79_002473;product=MFS transporter;protein_id=HJH9163949.1;transl_table=11 DALFDJ020000011.1 tpg gene 137007 137939 . + . ID=gene-O5D79_002474;Name=O5D79_002474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002474 DALFDJ020000011.1 Protein Homology CDS 137007 137939 . + 0 ID=cds-HJH9163950.1;Parent=gene-O5D79_002474;Dbxref=NCBI_GP:HJH9163950.1;Name=HJH9163950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216314.1;locus_tag=O5D79_002474;product=LysR substrate-binding domain-containing protein;protein_id=HJH9163950.1;transl_table=11 DALFDJ020000011.1 tpg gene 137981 139477 . - . ID=gene-O5D79_002475;Name=O5D79_002475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002475 DALFDJ020000011.1 Protein Homology CDS 137981 139477 . - 0 ID=cds-HJH9163951.1;Parent=gene-O5D79_002475;Dbxref=NCBI_GP:HJH9163951.1;Name=HJH9163951.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461834.1;locus_tag=O5D79_002475;product=GntP family permease;protein_id=HJH9163951.1;transl_table=11 DALFDJ020000011.1 tpg gene 139474 140424 . - . ID=gene-O5D79_002476;Name=denD;gbkey=Gene;gene=denD;gene_biotype=protein_coding;locus_tag=O5D79_002476 DALFDJ020000011.1 Protein Homology CDS 139474 140424 . - 0 ID=cds-HJH9163952.1;Parent=gene-O5D79_002476;Dbxref=NCBI_GP:HJH9163952.1;Name=HJH9163952.1;Ontology_term=GO:0005975,GO:0016491;gbkey=CDS;gene=denD;go_function=oxidoreductase activity|0016491||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461835.1;locus_tag=O5D79_002476;product=D-erythronate dehydrogenase;protein_id=HJH9163952.1;transl_table=11 DALFDJ020000011.1 tpg gene 140464 141240 . - . ID=gene-O5D79_002477;Name=O5D79_002477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002477 DALFDJ020000011.1 Protein Homology CDS 140464 141240 . - 0 ID=cds-HJH9163953.1;Parent=gene-O5D79_002477;Dbxref=NCBI_GP:HJH9163953.1;Name=HJH9163953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461836.1;locus_tag=O5D79_002477;product=HPr family phosphocarrier protein;protein_id=HJH9163953.1;transl_table=11 DALFDJ020000011.1 tpg gene 141245 141883 . - . ID=gene-O5D79_002478;Name=O5D79_002478;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002478 DALFDJ020000011.1 Protein Homology CDS 141245 141883 . - 0 ID=cds-HJH9163954.1;Parent=gene-O5D79_002478;Dbxref=NCBI_GP:HJH9163954.1;Name=HJH9163954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461837.1;locus_tag=O5D79_002478;product=aldolase;protein_id=HJH9163954.1;transl_table=11 DALFDJ020000011.1 tpg gene 141880 143142 . - . ID=gene-O5D79_002479;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=O5D79_002479 DALFDJ020000011.1 Protein Homology CDS 141880 143142 . - 0 ID=cds-HJH9163955.1;Parent=gene-O5D79_002479;Dbxref=NCBI_GP:HJH9163955.1;Name=HJH9163955.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461838.1;locus_tag=O5D79_002479;product=3-oxo-tetronate kinase;protein_id=HJH9163955.1;transl_table=11 DALFDJ020000011.1 tpg gene 143136 144059 . - . ID=gene-O5D79_002480;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=O5D79_002480 DALFDJ020000011.1 Protein Homology CDS 143136 144059 . - 0 ID=cds-HJH9163956.1;Parent=gene-O5D79_002480;Dbxref=NCBI_GP:HJH9163956.1;Name=HJH9163956.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461839.1;locus_tag=O5D79_002480;product=L-threonate dehydrogenase;protein_id=HJH9163956.1;transl_table=11 DALFDJ020000011.1 tpg gene 144256 145020 . + . ID=gene-O5D79_002481;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=O5D79_002481 DALFDJ020000011.1 Protein Homology CDS 144256 145020 . + 0 ID=cds-HJH9163957.1;Parent=gene-O5D79_002481;Dbxref=NCBI_GP:HJH9163957.1;Name=HJH9163957.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461840.1;locus_tag=O5D79_002481;product=DNA-binding transcriptional repressor YgbI;protein_id=HJH9163957.1;transl_table=11 DALFDJ020000011.1 tpg gene 145039 145443 . - . ID=gene-O5D79_002482;Name=O5D79_002482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002482 DALFDJ020000011.1 Protein Homology CDS 145039 145443 . - 0 ID=cds-HJH9163958.1;Parent=gene-O5D79_002482;Dbxref=NCBI_GP:HJH9163958.1;Name=HJH9163958.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461841.1;locus_tag=O5D79_002482;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=HJH9163958.1;transl_table=11 DALFDJ020000011.1 tpg gene 145614 146207 . + . ID=gene-O5D79_002483;Name=O5D79_002483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002483 DALFDJ020000011.1 Protein Homology CDS 145614 146207 . + 0 ID=cds-HJH9163959.1;Parent=gene-O5D79_002483;Dbxref=NCBI_GP:HJH9163959.1;Name=HJH9163959.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461842.1;locus_tag=O5D79_002483;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=HJH9163959.1;transl_table=11 DALFDJ020000011.1 tpg gene 146207 147634 . + . ID=gene-O5D79_002484;Name=O5D79_002484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002484 DALFDJ020000011.1 Protein Homology CDS 146207 147634 . + 0 ID=cds-HJH9163960.1;Parent=gene-O5D79_002484;Dbxref=NCBI_GP:HJH9163960.1;Name=HJH9163960.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461843.1;locus_tag=O5D79_002484;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=HJH9163960.1;transl_table=11 DALFDJ020000011.1 tpg gene 147645 147881 . + . ID=gene-O5D79_002485;Name=O5D79_002485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002485 DALFDJ020000011.1 Protein Homology CDS 147645 147881 . + 0 ID=cds-HJH9163961.1;Parent=gene-O5D79_002485;Dbxref=NCBI_GP:HJH9163961.1;Name=HJH9163961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461844.1;locus_tag=O5D79_002485;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=HJH9163961.1;transl_table=11 DALFDJ020000011.1 tpg gene 147926 148918 . - . ID=gene-O5D79_002486;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=O5D79_002486 DALFDJ020000011.1 Protein Homology CDS 147926 148918 . - 0 ID=cds-HJH9163962.1;Parent=gene-O5D79_002486;Dbxref=NCBI_GP:HJH9163962.1;Name=HJH9163962.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=O5D79_002486;product=RNA polymerase sigma factor RpoS;protein_id=HJH9163962.1;transl_table=11 DALFDJ020000011.1 tpg gene 148981 150063 . - . ID=gene-O5D79_002487;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=O5D79_002487 DALFDJ020000011.1 Protein Homology CDS 148981 150063 . - 0 ID=cds-HJH9163963.1;Parent=gene-O5D79_002487;Dbxref=NCBI_GP:HJH9163963.1;Name=HJH9163963.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=O5D79_002487;product=murein hydrolase activator NlpD;protein_id=HJH9163963.1;transl_table=11 DALFDJ020000011.1 tpg gene 149993 150151 . + . ID=gene-O5D79_002488;Name=O5D79_002488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002488 DALFDJ020000011.1 Protein Homology CDS 149993 150151 . + 0 ID=cds-HJH9163964.1;Parent=gene-O5D79_002488;Dbxref=NCBI_GP:HJH9163964.1;Name=HJH9163964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541719.1;locus_tag=O5D79_002488;product=peptidase;protein_id=HJH9163964.1;transl_table=11 DALFDJ020000011.1 tpg gene 150290 150916 . - . ID=gene-O5D79_002489;Name=O5D79_002489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002489 DALFDJ020000011.1 Protein Homology CDS 150290 150916 . - 0 ID=cds-HJH9163965.1;Parent=gene-O5D79_002489;Dbxref=NCBI_GP:HJH9163965.1;Name=HJH9163965.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=O5D79_002489;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=HJH9163965.1;transl_table=11 DALFDJ020000011.1 tpg gene 150910 151671 . - . ID=gene-O5D79_002490;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=O5D79_002490 DALFDJ020000011.1 Protein Homology CDS 150910 151671 . - 0 ID=cds-HJH9163966.1;Parent=gene-O5D79_002490;Dbxref=NCBI_GP:HJH9163966.1;Name=HJH9163966.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461848.1;locus_tag=O5D79_002490;product=5'/3'-nucleotidase SurE;protein_id=HJH9163966.1;transl_table=11 DALFDJ020000011.1 tpg gene 151652 152701 . - . ID=gene-O5D79_002491;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=O5D79_002491 DALFDJ020000011.1 Protein Homology CDS 151652 152701 . - 0 ID=cds-HJH9163967.1;Parent=gene-O5D79_002491;Dbxref=NCBI_GP:HJH9163967.1;Name=HJH9163967.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461849.1;locus_tag=O5D79_002491;product=tRNA pseudouridine(13) synthase TruD;protein_id=HJH9163967.1;transl_table=11 DALFDJ020000011.1 tpg gene 152698 153177 . - . ID=gene-O5D79_002492;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=O5D79_002492 DALFDJ020000011.1 Protein Homology CDS 152698 153177 . - 0 ID=cds-HJH9163968.1;Parent=gene-O5D79_002492;Dbxref=NCBI_GP:HJH9163968.1;Name=HJH9163968.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461850.1;locus_tag=O5D79_002492;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=HJH9163968.1;transl_table=11 DALFDJ020000011.1 tpg gene 153177 153887 . - . ID=gene-O5D79_002493;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=O5D79_002493 DALFDJ020000011.1 Protein Homology CDS 153177 153887 . - 0 ID=cds-HJH9163969.1;Parent=gene-O5D79_002493;Dbxref=NCBI_GP:HJH9163969.1;Name=HJH9163969.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461851.1;locus_tag=O5D79_002493;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=HJH9163969.1;transl_table=11 DALFDJ020000011.1 tpg gene 153906 154217 . - . ID=gene-O5D79_002494;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=O5D79_002494 DALFDJ020000011.1 Protein Homology CDS 153906 154217 . - 0 ID=cds-HJH9163970.1;Parent=gene-O5D79_002494;Dbxref=NCBI_GP:HJH9163970.1;Name=HJH9163970.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461852.1;locus_tag=O5D79_002494;product=cell division protein FtsB;protein_id=HJH9163970.1;transl_table=11 DALFDJ020000011.1 tpg gene 154408 154731 . - . ID=gene-O5D79_002495;Name=O5D79_002495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002495 DALFDJ020000011.1 Protein Homology CDS 154408 154731 . - 0 ID=cds-HJH9163971.1;Parent=gene-O5D79_002495;Dbxref=NCBI_GP:HJH9163971.1;Name=HJH9163971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246104.1;locus_tag=O5D79_002495;product=DUF3561 family protein;protein_id=HJH9163971.1;transl_table=11 DALFDJ020000011.1 tpg gene 154782 155387 . - . ID=gene-O5D79_002496;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=O5D79_002496 DALFDJ020000011.1 Protein Homology CDS 154782 155387 . - 0 ID=cds-HJH9163972.1;Parent=gene-O5D79_002496;Dbxref=NCBI_GP:HJH9163972.1;Name=HJH9163972.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461854.1;locus_tag=O5D79_002496;product=adenylyl-sulfate kinase;protein_id=HJH9163972.1;transl_table=11 DALFDJ020000011.1 tpg gene 155374 156813 . - . ID=gene-O5D79_002497;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=O5D79_002497 DALFDJ020000011.1 Protein Homology CDS 155374 156813 . - 0 ID=cds-HJH9163973.1;Parent=gene-O5D79_002497;Dbxref=NCBI_GP:HJH9163973.1;Name=HJH9163973.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461855.1;locus_tag=O5D79_002497;product=sulfate adenylyltransferase subunit CysN;protein_id=HJH9163973.1;transl_table=11 DALFDJ020000011.1 tpg gene 156823 157731 . - . ID=gene-O5D79_002498;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=O5D79_002498 DALFDJ020000011.1 Protein Homology CDS 156823 157731 . - 0 ID=cds-HJH9163974.1;Parent=gene-O5D79_002498;Dbxref=NCBI_GP:HJH9163974.1;Name=HJH9163974.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=O5D79_002498;product=sulfate adenylyltransferase subunit CysD;protein_id=HJH9163974.1;transl_table=11 DALFDJ020000011.1 tpg gene 157982 159028 . + . ID=gene-O5D79_002499;Name=O5D79_002499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002499 DALFDJ020000011.1 Protein Homology CDS 157982 159028 . + 0 ID=cds-HJH9163975.1;Parent=gene-O5D79_002499;Dbxref=NCBI_GP:HJH9163975.1;Name=HJH9163975.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461857.1;locus_tag=O5D79_002499;product=aminopeptidase;protein_id=HJH9163975.1;transl_table=11 DALFDJ020000011.1 tpg direct_repeat 159043 159376 . + . ID=id-DALFDJ020000011.1:159043..159376;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=159043..159071;rpt_unit_seq=cggtttatccccgctggcgcggggaacac DALFDJ020000011.1 tpg gene 159473 159766 . - . ID=gene-O5D79_002500;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=O5D79_002500 DALFDJ020000011.1 Protein Homology CDS 159473 159766 . - 0 ID=cds-HJH9163976.1;Parent=gene-O5D79_002500;Dbxref=NCBI_GP:HJH9163976.1;Name=HJH9163976.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311635.1;locus_tag=O5D79_002500;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=HJH9163976.1;transl_table=11 DALFDJ020000011.1 tpg gene 159766 160686 . - . ID=gene-O5D79_002501;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=O5D79_002501 DALFDJ020000011.1 Protein Homology CDS 159766 160686 . - 0 ID=cds-HJH9163977.1;Parent=gene-O5D79_002501;Dbxref=NCBI_GP:HJH9163977.1;Name=HJH9163977.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461859.1;locus_tag=O5D79_002501;product=type I-E CRISPR-associated endonuclease Cas1e;protein_id=HJH9163977.1;transl_table=11 DALFDJ020000011.1 tpg gene 160683 161333 . - . ID=gene-O5D79_002502;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=O5D79_002502 DALFDJ020000011.1 Protein Homology CDS 160683 161333 . - 0 ID=cds-HJH9163978.1;Parent=gene-O5D79_002502;Dbxref=NCBI_GP:HJH9163978.1;Name=HJH9163978.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas6e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461860.1;locus_tag=O5D79_002502;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=HJH9163978.1;transl_table=11 DALFDJ020000011.1 tpg gene 161315 162061 . - . ID=gene-O5D79_002503;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=O5D79_002503 DALFDJ020000011.1 Protein Homology CDS 161315 162061 . - 0 ID=cds-HJH9163979.1;Parent=gene-O5D79_002503;Dbxref=NCBI_GP:HJH9163979.1;Name=HJH9163979.1;Ontology_term=GO:0043571,GO:0051607,GO:0003723;gbkey=CDS;gene=cas5e;go_function=RNA binding|0003723||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461861.1;locus_tag=O5D79_002503;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=HJH9163979.1;transl_table=11 DALFDJ020000011.1 tpg gene 162072 163130 . - . ID=gene-O5D79_002504;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=O5D79_002504 DALFDJ020000011.1 Protein Homology CDS 162072 163130 . - 0 ID=cds-HJH9163980.1;Parent=gene-O5D79_002504;Dbxref=NCBI_GP:HJH9163980.1;Name=HJH9163980.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas7e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461862.1;locus_tag=O5D79_002504;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=HJH9163980.1;transl_table=11 DALFDJ020000011.1 tpg gene 163144 163692 . - . ID=gene-O5D79_002505;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;gene_synonym=cse2;locus_tag=O5D79_002505 DALFDJ020000011.1 Protein Homology CDS 163144 163692 . - 0 ID=cds-HJH9163981.1;Parent=gene-O5D79_002505;Dbxref=NCBI_GP:HJH9163981.1;Name=HJH9163981.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casB;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540805.1;locus_tag=O5D79_002505;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=HJH9163981.1;transl_table=11 DALFDJ020000011.1 tpg gene 163689 165248 . - . ID=gene-O5D79_002506;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;gene_synonym=cse1;locus_tag=O5D79_002506 DALFDJ020000011.1 Protein Homology CDS 163689 165248 . - 0 ID=cds-HJH9163982.1;Parent=gene-O5D79_002506;Dbxref=NCBI_GP:HJH9163982.1;Name=HJH9163982.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461864.1;locus_tag=O5D79_002506;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=HJH9163982.1;transl_table=11 DALFDJ020000011.1 tpg gene 165260 167923 . - . ID=gene-O5D79_002507;Name=cas3;gbkey=Gene;gene=cas3;gene_biotype=protein_coding;locus_tag=O5D79_002507 DALFDJ020000011.1 Protein Homology CDS 165260 167923 . - 0 ID=cds-HJH9163983.1;Parent=gene-O5D79_002507;Dbxref=NCBI_GP:HJH9163983.1;Name=HJH9163983.1;Ontology_term=GO:0043571,GO:0004386;gbkey=CDS;gene=cas3;go_function=helicase activity|0004386||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461865.1;locus_tag=O5D79_002507;product=CRISPR-associated helicase Cas3';protein_id=HJH9163983.1;transl_table=11 ##sequence-region DALFDJ020000012.1 1 159238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000012.1 tpg region 1 159238 . + . ID=DALFDJ020000012.1:1..159238;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000012.1 tpg gene 1 486 . - . ID=gene-O5D79_002508;Name=O5D79_002508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002508;partial=true;start_range=.,1 DALFDJ020000012.1 Protein Homology CDS 1 486 . - 0 ID=cds-HJH9163984.1;Parent=gene-O5D79_002508;Dbxref=NCBI_GP:HJH9163984.1;Name=HJH9163984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000159516.1;locus_tag=O5D79_002508;partial=true;product=DUF7666 domain-containing protein;protein_id=HJH9163984.1;start_range=.,1;transl_table=11 DALFDJ020000012.1 tpg gene 570 764 . - . ID=gene-O5D79_002509;Name=O5D79_002509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002509 DALFDJ020000012.1 Protein Homology CDS 570 764 . - 0 ID=cds-HJH9163985.1;Parent=gene-O5D79_002509;Dbxref=NCBI_GP:HJH9163985.1;Name=HJH9163985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213981.1;locus_tag=O5D79_002509;product=antirestriction Ral family protein;protein_id=HJH9163985.1;transl_table=11 DALFDJ020000012.1 tpg gene 797 1129 . - . ID=gene-O5D79_002510;Name=O5D79_002510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002510 DALFDJ020000012.1 Protein Homology CDS 797 1129 . - 0 ID=cds-HJH9163986.1;Parent=gene-O5D79_002510;Dbxref=NCBI_GP:HJH9163986.1;Name=HJH9163986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001296860.1;locus_tag=O5D79_002510;product=antitermination protein N;protein_id=HJH9163986.1;transl_table=11 DALFDJ020000012.1 tpg gene 1720 2352 . - . ID=gene-O5D79_002511;Name=O5D79_002511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002511 DALFDJ020000012.1 Protein Homology CDS 1720 2352 . - 0 ID=cds-HJH9163987.1;Parent=gene-O5D79_002511;Dbxref=NCBI_GP:HJH9163987.1;Name=HJH9163987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704102.1;locus_tag=O5D79_002511;product=helix-turn-helix domain-containing protein;protein_id=HJH9163987.1;transl_table=11 DALFDJ020000012.1 tpg gene 2453 2668 . + . ID=gene-O5D79_002512;Name=O5D79_002512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002512 DALFDJ020000012.1 Protein Homology CDS 2453 2668 . + 0 ID=cds-HJH9163988.1;Parent=gene-O5D79_002512;Dbxref=NCBI_GP:HJH9163988.1;Name=HJH9163988.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001194218.1;locus_tag=O5D79_002512;product=helix-turn-helix domain-containing protein;protein_id=HJH9163988.1;transl_table=11 DALFDJ020000012.1 tpg gene 2790 3068 . + . ID=gene-O5D79_002513;Name=O5D79_002513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002513 DALFDJ020000012.1 Protein Homology CDS 2790 3068 . + 0 ID=cds-HJH9163989.1;Parent=gene-O5D79_002513;Dbxref=NCBI_GP:HJH9163989.1;Name=HJH9163989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706465.1;locus_tag=O5D79_002513;product=lambda phage CII family protein;protein_id=HJH9163989.1;transl_table=11 DALFDJ020000012.1 tpg gene 3107 3250 . + . ID=gene-O5D79_002514;Name=O5D79_002514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002514 DALFDJ020000012.1 GeneMarkS-2+ CDS 3107 3250 . + 0 ID=cds-HJH9163990.1;Parent=gene-O5D79_002514;Dbxref=NCBI_GP:HJH9163990.1;Name=HJH9163990.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_002514;product=hypothetical protein;protein_id=HJH9163990.1;transl_table=11 DALFDJ020000012.1 tpg gene 3247 4095 . + . ID=gene-O5D79_002515;Name=O5D79_002515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002515 DALFDJ020000012.1 Protein Homology CDS 3247 4095 . + 0 ID=cds-HJH9163991.1;Parent=gene-O5D79_002515;Dbxref=NCBI_GP:HJH9163991.1;Name=HJH9163991.1;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015995303.1;locus_tag=O5D79_002515;product=replication protein;protein_id=HJH9163991.1;transl_table=11 DALFDJ020000012.1 tpg gene 4203 6083 . + . ID=gene-O5D79_002516;Name=O5D79_002516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002516 DALFDJ020000012.1 Protein Homology CDS 4203 6083 . + 0 ID=cds-HJH9163992.1;Parent=gene-O5D79_002516;Dbxref=NCBI_GP:HJH9163992.1;Name=HJH9163992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001322819.1;locus_tag=O5D79_002516;product=toprim domain-containing protein;protein_id=HJH9163992.1;transl_table=11 DALFDJ020000012.1 tpg gene 6159 6431 . + . ID=gene-O5D79_002517;Name=O5D79_002517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002517 DALFDJ020000012.1 Protein Homology CDS 6159 6431 . + 0 ID=cds-HJH9163993.1;Parent=gene-O5D79_002517;Dbxref=NCBI_GP:HJH9163993.1;Name=HJH9163993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000654041.1;locus_tag=O5D79_002517;product=DUF4752 family protein;protein_id=HJH9163993.1;transl_table=11 DALFDJ020000012.1 tpg gene 6444 6650 . + . ID=gene-O5D79_002518;Name=O5D79_002518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002518 DALFDJ020000012.1 Protein Homology CDS 6444 6650 . + 0 ID=cds-HJH9163994.1;Parent=gene-O5D79_002518;Dbxref=NCBI_GP:HJH9163994.1;Name=HJH9163994.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048696.1;locus_tag=O5D79_002518;product=DUF7301 family protein;protein_id=HJH9163994.1;transl_table=11 DALFDJ020000012.1 tpg gene 6662 6928 . + . ID=gene-O5D79_002519;Name=O5D79_002519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002519 DALFDJ020000012.1 Protein Homology CDS 6662 6928 . + 0 ID=cds-HJH9163995.1;Parent=gene-O5D79_002519;Dbxref=NCBI_GP:HJH9163995.1;Name=HJH9163995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000344564.1;locus_tag=O5D79_002519;product=hypothetical protein;protein_id=HJH9163995.1;transl_table=11 DALFDJ020000012.1 tpg gene 6931 7341 . + . ID=gene-O5D79_002520;Name=O5D79_002520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002520 DALFDJ020000012.1 Protein Homology CDS 6931 7341 . + 0 ID=cds-HJH9163996.1;Parent=gene-O5D79_002520;Dbxref=NCBI_GP:HJH9163996.1;Name=HJH9163996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966857.1;locus_tag=O5D79_002520;product=recombination protein NinB;protein_id=HJH9163996.1;transl_table=11 DALFDJ020000012.1 tpg gene 7338 7514 . + . ID=gene-O5D79_002521;Name=O5D79_002521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002521 DALFDJ020000012.1 Protein Homology CDS 7338 7514 . + 0 ID=cds-HJH9163997.1;Parent=gene-O5D79_002521;Dbxref=NCBI_GP:HJH9163997.1;Name=HJH9163997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311007.1;locus_tag=O5D79_002521;product=NinE family protein;protein_id=HJH9163997.1;transl_table=11 DALFDJ020000012.1 tpg gene 7517 7879 . + . ID=gene-O5D79_002522;Name=O5D79_002522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002522 DALFDJ020000012.1 Protein Homology CDS 7517 7879 . + 0 ID=cds-HJH9163998.1;Parent=gene-O5D79_002522;Dbxref=NCBI_GP:HJH9163998.1;Name=HJH9163998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001617188.1;locus_tag=O5D79_002522;product=phage protein NinX family protein;protein_id=HJH9163998.1;transl_table=11 DALFDJ020000012.1 tpg gene 7872 8048 . + . ID=gene-O5D79_002523;Name=O5D79_002523;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002523 DALFDJ020000012.1 Protein Homology CDS 7872 8048 . + 0 ID=cds-HJH9163999.1;Parent=gene-O5D79_002523;Dbxref=NCBI_GP:HJH9163999.1;Name=HJH9163999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000950944.1;locus_tag=O5D79_002523;product=protein NinF;protein_id=HJH9163999.1;transl_table=11 DALFDJ020000012.1 tpg gene 8041 8607 . + . ID=gene-O5D79_002524;Name=O5D79_002524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002524 DALFDJ020000012.1 Protein Homology CDS 8041 8607 . + 0 ID=cds-HJH9164000.1;Parent=gene-O5D79_002524;Dbxref=NCBI_GP:HJH9164000.1;Name=HJH9164000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311531.1;locus_tag=O5D79_002524;product=HNH endonuclease;protein_id=HJH9164000.1;transl_table=11 DALFDJ020000012.1 tpg gene 8582 9184 . + . ID=gene-O5D79_002525;Name=O5D79_002525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002525 DALFDJ020000012.1 Protein Homology CDS 8582 9184 . + 0 ID=cds-HJH9164001.1;Parent=gene-O5D79_002525;Dbxref=NCBI_GP:HJH9164001.1;Name=HJH9164001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311530.1;locus_tag=O5D79_002525;product=recombination protein NinG;protein_id=HJH9164001.1;transl_table=11 DALFDJ020000012.1 tpg gene 9181 9384 . + . ID=gene-O5D79_002526;Name=O5D79_002526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002526 DALFDJ020000012.1 Protein Homology CDS 9181 9384 . + 0 ID=cds-HJH9164002.1;Parent=gene-O5D79_002526;Dbxref=NCBI_GP:HJH9164002.1;Name=HJH9164002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000149880.1;locus_tag=O5D79_002526;product=protein ninH;protein_id=HJH9164002.1;transl_table=11 DALFDJ020000012.1 tpg gene 9365 9544 . + . ID=gene-O5D79_002527;Name=O5D79_002527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002527 DALFDJ020000012.1 Protein Homology CDS 9365 9544 . + 0 ID=cds-HJH9164003.1;Parent=gene-O5D79_002527;Dbxref=NCBI_GP:HJH9164003.1;Name=HJH9164003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016048830.1;locus_tag=O5D79_002527;product=hypothetical protein;protein_id=HJH9164003.1;transl_table=11 DALFDJ020000012.1 tpg gene 9541 10059 . + . ID=gene-O5D79_002528;Name=O5D79_002528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002528 DALFDJ020000012.1 Protein Homology CDS 9541 10059 . + 0 ID=cds-HJH9164004.1;Parent=gene-O5D79_002528;Dbxref=NCBI_GP:HJH9164004.1;Name=HJH9164004.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015973887.1;locus_tag=O5D79_002528;product=antiterminator Q family protein;protein_id=HJH9164004.1;transl_table=11 DALFDJ020000012.1 tpg gene 10124 10198 . + . ID=gene-O5D79_002529;Name=O5D79_002529;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_002529 DALFDJ020000012.1 tRNAscan-SE tRNA 10124 10198 . + . ID=rna-O5D79_002529;Parent=gene-O5D79_002529;anticodon=(pos:10157..10159);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002529;product=tRNA-Asn DALFDJ020000012.1 tRNAscan-SE exon 10124 10198 . + . ID=exon-O5D79_002529-1;Parent=rna-O5D79_002529;anticodon=(pos:10157..10159);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002529;product=tRNA-Asn DALFDJ020000012.1 tpg gene 10204 10279 . + . ID=gene-O5D79_002530;Name=O5D79_002530;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_002530 DALFDJ020000012.1 tRNAscan-SE tRNA 10204 10279 . + . ID=rna-O5D79_002530;Parent=gene-O5D79_002530;anticodon=(pos:10237..10239);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002530;product=tRNA-Thr DALFDJ020000012.1 tRNAscan-SE exon 10204 10279 . + . ID=exon-O5D79_002530-1;Parent=rna-O5D79_002530;anticodon=(pos:10237..10239);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002530;product=tRNA-Thr DALFDJ020000012.1 tpg gene 10524 10727 . + . ID=gene-O5D79_002531;Name=O5D79_002531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002531 DALFDJ020000012.1 Protein Homology CDS 10524 10727 . + 0 ID=cds-HJH9164005.1;Parent=gene-O5D79_002531;Dbxref=NCBI_GP:HJH9164005.1;Name=HJH9164005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000286100.1;locus_tag=O5D79_002531;product=phage holin family protein;protein_id=HJH9164005.1;transl_table=11 DALFDJ020000012.1 tpg gene 10705 11202 . + . ID=gene-O5D79_002532;Name=O5D79_002532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002532 DALFDJ020000012.1 Protein Homology CDS 10705 11202 . + 0 ID=cds-HJH9164006.1;Parent=gene-O5D79_002532;Dbxref=NCBI_GP:HJH9164006.1;Name=HJH9164006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415087.1;locus_tag=O5D79_002532;product=lysozyme;protein_id=HJH9164006.1;transl_table=11 DALFDJ020000012.1 tpg gene 11291 11728 . + . ID=gene-O5D79_002533;Name=O5D79_002533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002533 DALFDJ020000012.1 Protein Homology CDS 11291 11728 . + 0 ID=cds-HJH9164007.1;Parent=gene-O5D79_002533;Dbxref=NCBI_GP:HJH9164007.1;Name=HJH9164007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009453323.1;locus_tag=O5D79_002533;product=lysis protein;protein_id=HJH9164007.1;transl_table=11 DALFDJ020000012.1 tpg gene 12276 12926 . + . ID=gene-O5D79_002534;Name=O5D79_002534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002534 DALFDJ020000012.1 Protein Homology CDS 12276 12926 . + 0 ID=cds-HJH9164008.1;Parent=gene-O5D79_002534;Dbxref=NCBI_GP:HJH9164008.1;Name=HJH9164008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693189.1;locus_tag=O5D79_002534;product=hypothetical protein;protein_id=HJH9164008.1;transl_table=11 DALFDJ020000012.1 tpg gene 12923 14485 . + . ID=gene-O5D79_002535;Name=O5D79_002535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002535 DALFDJ020000012.1 Protein Homology CDS 12923 14485 . + 0 ID=cds-HJH9164009.1;Parent=gene-O5D79_002535;Dbxref=NCBI_GP:HJH9164009.1;Name=HJH9164009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693190.1;locus_tag=O5D79_002535;product=terminase;protein_id=HJH9164009.1;transl_table=11 DALFDJ020000012.1 tpg gene 14497 15942 . + . ID=gene-O5D79_002536;Name=O5D79_002536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002536 DALFDJ020000012.1 Protein Homology CDS 14497 15942 . + 0 ID=cds-HJH9164010.1;Parent=gene-O5D79_002536;Dbxref=NCBI_GP:HJH9164010.1;Name=HJH9164010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196583.1;locus_tag=O5D79_002536;product=DUF1073 domain-containing protein;protein_id=HJH9164010.1;transl_table=11 DALFDJ020000012.1 tpg gene 15905 16912 . + . ID=gene-O5D79_002537;Name=O5D79_002537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002537 DALFDJ020000012.1 Protein Homology CDS 15905 16912 . + 0 ID=cds-HJH9164011.1;Parent=gene-O5D79_002537;Dbxref=NCBI_GP:HJH9164011.1;Name=HJH9164011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151274.1;locus_tag=O5D79_002537;product=phage minor head protein;protein_id=HJH9164011.1;transl_table=11 DALFDJ020000012.1 tpg gene 16909 17112 . + . ID=gene-O5D79_002538;Name=O5D79_002538;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002538 DALFDJ020000012.1 GeneMarkS-2+ CDS 16909 17112 . + 0 ID=cds-HJH9164012.1;Parent=gene-O5D79_002538;Dbxref=NCBI_GP:HJH9164012.1;Name=HJH9164012.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_002538;product=hypothetical protein;protein_id=HJH9164012.1;transl_table=11 DALFDJ020000012.1 tpg gene 17274 18644 . + . ID=gene-O5D79_002539;Name=O5D79_002539;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002539 DALFDJ020000012.1 Protein Homology CDS 17274 18644 . + 0 ID=cds-HJH9164013.1;Parent=gene-O5D79_002539;Dbxref=NCBI_GP:HJH9164013.1;Name=HJH9164013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706549.1;locus_tag=O5D79_002539;product=DUF2213 domain-containing protein;protein_id=HJH9164013.1;transl_table=11 DALFDJ020000012.1 tpg gene 18648 19094 . + . ID=gene-O5D79_002540;Name=O5D79_002540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002540 DALFDJ020000012.1 Protein Homology CDS 18648 19094 . + 0 ID=cds-HJH9164014.1;Parent=gene-O5D79_002540;Dbxref=NCBI_GP:HJH9164014.1;Name=HJH9164014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151271.1;locus_tag=O5D79_002540;product=hypothetical protein;protein_id=HJH9164014.1;transl_table=11 DALFDJ020000012.1 tpg gene 19106 20200 . + . ID=gene-O5D79_002541;Name=O5D79_002541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002541 DALFDJ020000012.1 Protein Homology CDS 19106 20200 . + 0 ID=cds-HJH9164015.1;Parent=gene-O5D79_002541;Dbxref=NCBI_GP:HJH9164015.1;Name=HJH9164015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151270.1;locus_tag=O5D79_002541;product=major capsid protein;protein_id=HJH9164015.1;transl_table=11 DALFDJ020000012.1 tpg gene 20210 20416 . + . ID=gene-O5D79_002542;Name=O5D79_002542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002542 DALFDJ020000012.1 Protein Homology CDS 20210 20416 . + 0 ID=cds-HJH9164016.1;Parent=gene-O5D79_002542;Dbxref=NCBI_GP:HJH9164016.1;Name=HJH9164016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706560.1;locus_tag=O5D79_002542;product=hypothetical protein;protein_id=HJH9164016.1;transl_table=11 DALFDJ020000012.1 tpg gene 20419 20799 . + . ID=gene-O5D79_002543;Name=O5D79_002543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002543 DALFDJ020000012.1 Protein Homology CDS 20419 20799 . + 0 ID=cds-HJH9164017.1;Parent=gene-O5D79_002543;Dbxref=NCBI_GP:HJH9164017.1;Name=HJH9164017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151268.1;locus_tag=O5D79_002543;product=DUF7370 family protein;protein_id=HJH9164017.1;transl_table=11 DALFDJ020000012.1 tpg gene 20799 21074 . + . ID=gene-O5D79_002544;Name=O5D79_002544;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002544 DALFDJ020000012.1 Protein Homology CDS 20799 21074 . + 0 ID=cds-HJH9164018.1;Parent=gene-O5D79_002544;Dbxref=NCBI_GP:HJH9164018.1;Name=HJH9164018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000968548.1;locus_tag=O5D79_002544;product=hypothetical protein;protein_id=HJH9164018.1;transl_table=11 DALFDJ020000012.1 tpg gene 21245 21601 . + . ID=gene-O5D79_002545;Name=O5D79_002545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002545 DALFDJ020000012.1 Protein Homology CDS 21245 21601 . + 0 ID=cds-HJH9164019.1;Parent=gene-O5D79_002545;Dbxref=NCBI_GP:HJH9164019.1;Name=HJH9164019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170186.1;locus_tag=O5D79_002545;product=hypothetical protein;protein_id=HJH9164019.1;transl_table=11 DALFDJ020000012.1 tpg gene 21603 22028 . + . ID=gene-O5D79_002546;Name=O5D79_002546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002546 DALFDJ020000012.1 Protein Homology CDS 21603 22028 . + 0 ID=cds-HJH9164020.1;Parent=gene-O5D79_002546;Dbxref=NCBI_GP:HJH9164020.1;Name=HJH9164020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196540.1;locus_tag=O5D79_002546;product=HK97 gp10 family phage protein;protein_id=HJH9164020.1;transl_table=11 DALFDJ020000012.1 tpg gene 22025 22408 . + . ID=gene-O5D79_002547;Name=O5D79_002547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002547 DALFDJ020000012.1 Protein Homology CDS 22025 22408 . + 0 ID=cds-HJH9164021.1;Parent=gene-O5D79_002547;Dbxref=NCBI_GP:HJH9164021.1;Name=HJH9164021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001514206.1;locus_tag=O5D79_002547;product=phage tail termination protein;protein_id=HJH9164021.1;transl_table=11 DALFDJ020000012.1 tpg gene 22480 23238 . + . ID=gene-O5D79_002548;Name=O5D79_002548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002548 DALFDJ020000012.1 Protein Homology CDS 22480 23238 . + 0 ID=cds-HJH9164022.1;Parent=gene-O5D79_002548;Dbxref=NCBI_GP:HJH9164022.1;Name=HJH9164022.1;Ontology_term=GO:0098026;gbkey=CDS;go_component=virus tail%2C tube|0098026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727935.1;locus_tag=O5D79_002548;product=phage tail tube protein;protein_id=HJH9164022.1;transl_table=11 DALFDJ020000012.1 tpg gene 23295 23966 . + . ID=gene-O5D79_002549;Name=O5D79_002549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002549 DALFDJ020000012.1 Protein Homology CDS 23295 23966 . + 0 ID=cds-HJH9164023.1;Parent=gene-O5D79_002549;Dbxref=NCBI_GP:HJH9164023.1;Name=HJH9164023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727936.1;locus_tag=O5D79_002549;product=DUF6246 family protein;protein_id=HJH9164023.1;transl_table=11 DALFDJ020000012.1 tpg gene 23985 26498 . + . ID=gene-O5D79_002550;Name=O5D79_002550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002550 DALFDJ020000012.1 Protein Homology CDS 23985 26498 . + 0 ID=cds-HJH9164024.1;Parent=gene-O5D79_002550;Dbxref=NCBI_GP:HJH9164024.1;Name=HJH9164024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046199.1;locus_tag=O5D79_002550;product=phage tail length tape measure family protein;protein_id=HJH9164024.1;transl_table=11 DALFDJ020000012.1 tpg gene 26501 27004 . + . ID=gene-O5D79_002551;Name=O5D79_002551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002551 DALFDJ020000012.1 Protein Homology CDS 26501 27004 . + 0 ID=cds-HJH9164025.1;Parent=gene-O5D79_002551;Dbxref=NCBI_GP:HJH9164025.1;Name=HJH9164025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883988.1;locus_tag=O5D79_002551;product=hypothetical protein;protein_id=HJH9164025.1;transl_table=11 DALFDJ020000012.1 tpg gene 27004 27474 . + . ID=gene-O5D79_002552;Name=O5D79_002552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002552 DALFDJ020000012.1 Protein Homology CDS 27004 27474 . + 0 ID=cds-HJH9164026.1;Parent=gene-O5D79_002552;Dbxref=NCBI_GP:HJH9164026.1;Name=HJH9164026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727939.1;locus_tag=O5D79_002552;product=hypothetical protein;protein_id=HJH9164026.1;transl_table=11 DALFDJ020000012.1 tpg gene 27467 27925 . + . ID=gene-O5D79_002553;Name=O5D79_002553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002553 DALFDJ020000012.1 Protein Homology CDS 27467 27925 . + 0 ID=cds-HJH9164027.1;Parent=gene-O5D79_002553;Dbxref=NCBI_GP:HJH9164027.1;Name=HJH9164027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278433.1;locus_tag=O5D79_002553;product=NlpC/P60 family protein;protein_id=HJH9164027.1;transl_table=11 DALFDJ020000012.1 tpg gene 28029 30338 . + . ID=gene-O5D79_002554;Name=O5D79_002554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002554 DALFDJ020000012.1 Protein Homology CDS 28029 30338 . + 0 ID=cds-HJH9164028.1;Parent=gene-O5D79_002554;Dbxref=NCBI_GP:HJH9164028.1;Name=HJH9164028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014070781.1;locus_tag=O5D79_002554;product=host specificity factor TipJ family phage tail protein;protein_id=HJH9164028.1;transl_table=11 DALFDJ020000012.1 tpg gene 30396 32528 . + . ID=gene-O5D79_002555;Name=O5D79_002555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002555 DALFDJ020000012.1 Protein Homology CDS 30396 32528 . + 0 ID=cds-HJH9164029.1;Parent=gene-O5D79_002555;Dbxref=NCBI_GP:HJH9164029.1;Name=HJH9164029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280398.1;locus_tag=O5D79_002555;product=GDSL-type esterase/lipase family protein;protein_id=HJH9164029.1;transl_table=11 DALFDJ020000012.1 tpg gene 32874 34796 . - . ID=gene-O5D79_002556;Name=O5D79_002556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002556 DALFDJ020000012.1 Protein Homology CDS 32874 34796 . - 0 ID=cds-HJH9164030.1;Parent=gene-O5D79_002556;Dbxref=NCBI_GP:HJH9164030.1;Name=HJH9164030.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400614.1;locus_tag=O5D79_002556;product=acyltransferase family protein;protein_id=HJH9164030.1;transl_table=11 DALFDJ020000012.1 tpg gene 34868 35143 . - . ID=gene-O5D79_002557;Name=O5D79_002557;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002557 DALFDJ020000012.1 GeneMarkS-2+ CDS 34868 35143 . - 0 ID=cds-HJH9164031.1;Parent=gene-O5D79_002557;Dbxref=NCBI_GP:HJH9164031.1;Name=HJH9164031.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_002557;product=hypothetical protein;protein_id=HJH9164031.1;transl_table=11 DALFDJ020000012.1 tpg pseudogene 35257 35631 . + . ID=gene-O5D79_002558;Name=O5D79_002558;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_002558;pseudo=true DALFDJ020000012.1 Protein Homology CDS 35257 35631 . + 0 ID=cds-O5D79_002558;Parent=gene-O5D79_002558;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156663.1;locus_tag=O5D79_002558;product=S24 family peptidase;pseudo=true;transl_table=11 DALFDJ020000012.1 tpg pseudogene 36174 36278 . + . ID=gene-O5D79_002559;Name=O5D79_002559;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_002559;pseudo=true DALFDJ020000012.1 Protein Homology CDS 36174 36278 . + 0 ID=cds-O5D79_002559;Parent=gene-O5D79_002559;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000574020.1;locus_tag=O5D79_002559;product=cation transporter;pseudo=true;transl_table=11 DALFDJ020000012.1 tpg gene 36329 37183 . - . ID=gene-O5D79_002560;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=O5D79_002560 DALFDJ020000012.1 Protein Homology CDS 36329 37183 . - 0 ID=cds-HJH9164032.1;Parent=gene-O5D79_002560;Dbxref=NCBI_GP:HJH9164032.1;Name=HJH9164032.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459555.1;locus_tag=O5D79_002560;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=HJH9164032.1;transl_table=11 DALFDJ020000012.1 tpg gene 37399 38724 . + . ID=gene-O5D79_002561;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=O5D79_002561 DALFDJ020000012.1 Protein Homology CDS 37399 38724 . + 0 ID=cds-HJH9164033.1;Parent=gene-O5D79_002561;Dbxref=NCBI_GP:HJH9164033.1;Name=HJH9164033.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459556.1;locus_tag=O5D79_002561;product=reactive chlorine resistance oxidoreductase RclA;protein_id=HJH9164033.1;transl_table=11 DALFDJ020000012.1 tpg gene 38881 39117 . + . ID=gene-O5D79_002562;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=O5D79_002562 DALFDJ020000012.1 Protein Homology CDS 38881 39117 . + 0 ID=cds-HJH9164034.1;Parent=gene-O5D79_002562;Dbxref=NCBI_GP:HJH9164034.1;Name=HJH9164034.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459557.1;locus_tag=O5D79_002562;product=reactive chlorine resistance periplasmic protein RclB;protein_id=HJH9164034.1;transl_table=11 DALFDJ020000012.1 tpg gene 39130 39690 . + . ID=gene-O5D79_002563;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=O5D79_002563 DALFDJ020000012.1 Protein Homology CDS 39130 39690 . + 0 ID=cds-HJH9164035.1;Parent=gene-O5D79_002563;Dbxref=NCBI_GP:HJH9164035.1;Name=HJH9164035.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459558.1;locus_tag=O5D79_002563;product=reactive chlorine resistance membrane protein RclC;protein_id=HJH9164035.1;transl_table=11 DALFDJ020000012.1 tpg gene 39769 40944 . - . ID=gene-O5D79_002564;Name=O5D79_002564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002564 DALFDJ020000012.1 Protein Homology CDS 39769 40944 . - 0 ID=cds-HJH9164036.1;Parent=gene-O5D79_002564;Dbxref=NCBI_GP:HJH9164036.1;Name=HJH9164036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459559.1;locus_tag=O5D79_002564;product=DnaJ family molecular chaperone;protein_id=HJH9164036.1;transl_table=11 DALFDJ020000012.1 tpg gene 41270 42664 . + . ID=gene-O5D79_002565;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=O5D79_002565 DALFDJ020000012.1 Protein Homology CDS 41270 42664 . + 0 ID=cds-HJH9164037.1;Parent=gene-O5D79_002565;Dbxref=NCBI_GP:HJH9164037.1;Name=HJH9164037.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459560.1;locus_tag=O5D79_002565;product=phenylalanine transporter;protein_id=HJH9164037.1;transl_table=11 DALFDJ020000012.1 tpg gene 42706 43953 . - . ID=gene-O5D79_002566;Name=O5D79_002566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002566 DALFDJ020000012.1 Protein Homology CDS 42706 43953 . - 0 ID=cds-HJH9164038.1;Parent=gene-O5D79_002566;Dbxref=NCBI_GP:HJH9164038.1;Name=HJH9164038.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459561.1;locus_tag=O5D79_002566;product=mechanosensitive ion channel family protein;protein_id=HJH9164038.1;transl_table=11 DALFDJ020000012.1 tpg gene 44264 46234 . + . ID=gene-O5D79_002567;Name=O5D79_002567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002567 DALFDJ020000012.1 Protein Homology CDS 44264 46234 . + 0 ID=cds-HJH9164039.1;Parent=gene-O5D79_002567;Dbxref=NCBI_GP:HJH9164039.1;Name=HJH9164039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459562.1;locus_tag=O5D79_002567;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=HJH9164039.1;transl_table=11 DALFDJ020000012.1 tpg gene 46500 47153 . - . ID=gene-O5D79_002568;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=O5D79_002568 DALFDJ020000012.1 Protein Homology CDS 46500 47153 . - 0 ID=cds-HJH9164040.1;Parent=gene-O5D79_002568;Dbxref=NCBI_GP:HJH9164040.1;Name=HJH9164040.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459570.1;locus_tag=O5D79_002568;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=HJH9164040.1;transl_table=11 DALFDJ020000012.1 tpg gene 47250 47618 . - . ID=gene-O5D79_002569;Name=O5D79_002569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002569 DALFDJ020000012.1 Protein Homology CDS 47250 47618 . - 0 ID=cds-HJH9164041.1;Parent=gene-O5D79_002569;Dbxref=NCBI_GP:HJH9164041.1;Name=HJH9164041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459571.1;locus_tag=O5D79_002569;product=MmcQ/YjbR family DNA-binding protein;protein_id=HJH9164041.1;transl_table=11 DALFDJ020000012.1 tpg gene 47618 48199 . - . ID=gene-O5D79_002570;Name=O5D79_002570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002570 DALFDJ020000012.1 Protein Homology CDS 47618 48199 . - 0 ID=cds-HJH9164042.1;Parent=gene-O5D79_002570;Dbxref=NCBI_GP:HJH9164042.1;Name=HJH9164042.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459572.1;locus_tag=O5D79_002570;product=TetR/AcrR family transcriptional regulator;protein_id=HJH9164042.1;transl_table=11 DALFDJ020000012.1 tpg gene 48488 48829 . + . ID=gene-O5D79_002571;Name=O5D79_002571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002571 DALFDJ020000012.1 Protein Homology CDS 48488 48829 . + 0 ID=cds-HJH9164043.1;Parent=gene-O5D79_002571;Dbxref=NCBI_GP:HJH9164043.1;Name=HJH9164043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459573.1;locus_tag=O5D79_002571;product=RamA family antibiotic efflux transcriptional regulator;protein_id=HJH9164043.1;transl_table=11 DALFDJ020000012.1 tpg gene 48835 49083 . - . ID=gene-O5D79_002572;Name=O5D79_002572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002572 DALFDJ020000012.1 Protein Homology CDS 48835 49083 . - 0 ID=cds-HJH9164044.1;Parent=gene-O5D79_002572;Dbxref=NCBI_GP:HJH9164044.1;Name=HJH9164044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459574.1;locus_tag=O5D79_002572;product=DUF1158 family protein;protein_id=HJH9164044.1;transl_table=11 DALFDJ020000012.1 tpg gene 49150 50268 . - . ID=gene-O5D79_002573;Name=O5D79_002573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002573 DALFDJ020000012.1 Protein Homology CDS 49150 50268 . - 0 ID=cds-HJH9164045.1;Parent=gene-O5D79_002573;Dbxref=NCBI_GP:HJH9164045.1;Name=HJH9164045.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459575.1;locus_tag=O5D79_002573;product=YbdK family carboxylate-amine ligase;protein_id=HJH9164045.1;transl_table=11 DALFDJ020000012.1 tpg gene 50280 50984 . - . ID=gene-O5D79_002574;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=O5D79_002574 DALFDJ020000012.1 Protein Homology CDS 50280 50984 . - 0 ID=cds-HJH9164046.1;Parent=gene-O5D79_002574;Dbxref=NCBI_GP:HJH9164046.1;Name=HJH9164046.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459576.1;locus_tag=O5D79_002574;product=enterobactin synthase subunit EntD;protein_id=HJH9164046.1;transl_table=11 DALFDJ020000012.1 tpg gene 51031 53286 . - . ID=gene-O5D79_002575;Name=O5D79_002575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002575 DALFDJ020000012.1 Protein Homology CDS 51031 53286 . - 0 ID=cds-HJH9164047.1;Parent=gene-O5D79_002575;Dbxref=NCBI_GP:HJH9164047.1;Name=HJH9164047.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459577.1;locus_tag=O5D79_002575;product=TonB-dependent siderophore receptor;protein_id=HJH9164047.1;transl_table=11 DALFDJ020000012.1 tpg gene 53475 54689 . + . ID=gene-O5D79_002576;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=O5D79_002576 DALFDJ020000012.1 Protein Homology CDS 53475 54689 . + 0 ID=cds-HJH9164048.1;Parent=gene-O5D79_002576;Dbxref=NCBI_GP:HJH9164048.1;Name=HJH9164048.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459578.1;locus_tag=O5D79_002576;product=enterochelin esterase;protein_id=HJH9164048.1;transl_table=11 DALFDJ020000012.1 tpg gene 54720 54938 . + . ID=gene-O5D79_002577;Name=O5D79_002577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002577 DALFDJ020000012.1 Protein Homology CDS 54720 54938 . + 0 ID=cds-HJH9164049.1;Parent=gene-O5D79_002577;Dbxref=NCBI_GP:HJH9164049.1;Name=HJH9164049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459579.1;locus_tag=O5D79_002577;product=MbtH family protein;protein_id=HJH9164049.1;transl_table=11 DALFDJ020000012.1 tpg gene 54935 58819 . + . ID=gene-O5D79_002578;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=O5D79_002578 DALFDJ020000012.1 Protein Homology CDS 54935 58819 . + 0 ID=cds-HJH9164050.1;Parent=gene-O5D79_002578;Dbxref=NCBI_GP:HJH9164050.1;Name=HJH9164050.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459580.1;locus_tag=O5D79_002578;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=HJH9164050.1;transl_table=11 DALFDJ020000012.1 tpg gene 59069 60205 . + . ID=gene-O5D79_002579;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=O5D79_002579 DALFDJ020000012.1 Protein Homology CDS 59069 60205 . + 0 ID=cds-HJH9164051.1;Parent=gene-O5D79_002579;Dbxref=NCBI_GP:HJH9164051.1;Name=HJH9164051.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459581.1;locus_tag=O5D79_002579;product=LPS O-antigen length regulator Wzz(fepE);protein_id=HJH9164051.1;transl_table=11 DALFDJ020000012.1 tpg gene 60258 61052 . - . ID=gene-O5D79_002580;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=O5D79_002580 DALFDJ020000012.1 Protein Homology CDS 60258 61052 . - 0 ID=cds-HJH9164052.1;Parent=gene-O5D79_002580;Dbxref=NCBI_GP:HJH9164052.1;Name=HJH9164052.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459582.1;locus_tag=O5D79_002580;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=HJH9164052.1;transl_table=11 DALFDJ020000012.1 tpg gene 61049 62038 . - . ID=gene-O5D79_002581;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=O5D79_002581 DALFDJ020000012.1 Protein Homology CDS 61049 62038 . - 0 ID=cds-HJH9164053.1;Parent=gene-O5D79_002581;Dbxref=NCBI_GP:HJH9164053.1;Name=HJH9164053.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459583.1;locus_tag=O5D79_002581;product=iron-enterobactin ABC transporter permease;protein_id=HJH9164053.1;transl_table=11 DALFDJ020000012.1 tpg gene 62038 63045 . - . ID=gene-O5D79_002582;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=O5D79_002582 DALFDJ020000012.1 Protein Homology CDS 62038 63045 . - 0 ID=cds-HJH9164054.1;Parent=gene-O5D79_002582;Dbxref=NCBI_GP:HJH9164054.1;Name=HJH9164054.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459584.1;locus_tag=O5D79_002582;product=Fe(3+)-siderophore ABC transporter permease;protein_id=HJH9164054.1;transl_table=11 DALFDJ020000012.1 tpg gene 63156 64400 . + . ID=gene-O5D79_002583;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=O5D79_002583 DALFDJ020000012.1 Protein Homology CDS 63156 64400 . + 0 ID=cds-HJH9164055.1;Parent=gene-O5D79_002583;Dbxref=NCBI_GP:HJH9164055.1;Name=HJH9164055.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459585.1;locus_tag=O5D79_002583;product=enterobactin transporter EntS;protein_id=HJH9164055.1;transl_table=11 DALFDJ020000012.1 tpg gene 64463 65419 . - . ID=gene-O5D79_002584;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=O5D79_002584 DALFDJ020000012.1 Protein Homology CDS 64463 65419 . - 0 ID=cds-HJH9164056.1;Parent=gene-O5D79_002584;Dbxref=NCBI_GP:HJH9164056.1;Name=HJH9164056.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459586.1;locus_tag=O5D79_002584;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=HJH9164056.1;transl_table=11 DALFDJ020000012.1 tpg gene 65728 66903 . + . ID=gene-O5D79_002585;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=O5D79_002585 DALFDJ020000012.1 Protein Homology CDS 65728 66903 . + 0 ID=cds-HJH9164057.1;Parent=gene-O5D79_002585;Dbxref=NCBI_GP:HJH9164057.1;Name=HJH9164057.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459587.1;locus_tag=O5D79_002585;product=isochorismate synthase EntC;protein_id=HJH9164057.1;transl_table=11 DALFDJ020000012.1 tpg gene 66913 68523 . + . ID=gene-O5D79_002586;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=O5D79_002586 DALFDJ020000012.1 Protein Homology CDS 66913 68523 . + 0 ID=cds-HJH9164058.1;Parent=gene-O5D79_002586;Dbxref=NCBI_GP:HJH9164058.1;Name=HJH9164058.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459588.1;locus_tag=O5D79_002586;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=HJH9164058.1;transl_table=11 DALFDJ020000012.1 tpg gene 68537 69394 . + . ID=gene-O5D79_002587;Name=O5D79_002587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002587 DALFDJ020000012.1 Protein Homology CDS 68537 69394 . + 0 ID=cds-HJH9164059.1;Parent=gene-O5D79_002587;Dbxref=NCBI_GP:HJH9164059.1;Name=HJH9164059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459589.1;locus_tag=O5D79_002587;product=isochorismatase family protein;protein_id=HJH9164059.1;transl_table=11 DALFDJ020000012.1 tpg gene 69394 70149 . + . ID=gene-O5D79_002588;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=O5D79_002588 DALFDJ020000012.1 Protein Homology CDS 69394 70149 . + 0 ID=cds-HJH9164060.1;Parent=gene-O5D79_002588;Dbxref=NCBI_GP:HJH9164060.1;Name=HJH9164060.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459590.1;locus_tag=O5D79_002588;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=HJH9164060.1;transl_table=11 DALFDJ020000012.1 tpg gene 70152 70565 . + . ID=gene-O5D79_002589;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=O5D79_002589 DALFDJ020000012.1 Protein Homology CDS 70152 70565 . + 0 ID=cds-HJH9164061.1;Parent=gene-O5D79_002589;Dbxref=NCBI_GP:HJH9164061.1;Name=HJH9164061.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459591.1;locus_tag=O5D79_002589;product=proofreading thioesterase EntH;protein_id=HJH9164061.1;transl_table=11 DALFDJ020000012.1 tpg gene 70747 72852 . + . ID=gene-O5D79_002590;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=O5D79_002590 DALFDJ020000012.1 Protein Homology CDS 70747 72852 . + 0 ID=cds-HJH9164062.1;Parent=gene-O5D79_002590;Dbxref=NCBI_GP:HJH9164062.1;Name=HJH9164062.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459592.1;locus_tag=O5D79_002590;product=pyruvate/proton symporter CstA;protein_id=HJH9164062.1;transl_table=11 DALFDJ020000012.1 tpg gene 72916 73113 . + . ID=gene-O5D79_002591;Name=O5D79_002591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002591 DALFDJ020000012.1 Protein Homology CDS 72916 73113 . + 0 ID=cds-HJH9164063.1;Parent=gene-O5D79_002591;Dbxref=NCBI_GP:HJH9164063.1;Name=HJH9164063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=O5D79_002591;product=YbdD/YjiX family protein;protein_id=HJH9164063.1;transl_table=11 DALFDJ020000012.1 tpg gene 73149 74237 . - . ID=gene-O5D79_002592;Name=O5D79_002592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002592 DALFDJ020000012.1 Protein Homology CDS 73149 74237 . - 0 ID=cds-HJH9164064.1;Parent=gene-O5D79_002592;Dbxref=NCBI_GP:HJH9164064.1;Name=HJH9164064.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459594.1;locus_tag=O5D79_002592;product=oxidoreductase;protein_id=HJH9164064.1;transl_table=11 DALFDJ020000012.1 tpg gene 74364 75524 . + . ID=gene-O5D79_002593;Name=O5D79_002593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002593 DALFDJ020000012.1 Protein Homology CDS 74364 75524 . + 0 ID=cds-HJH9164065.1;Parent=gene-O5D79_002593;Dbxref=NCBI_GP:HJH9164065.1;Name=HJH9164065.1;Ontology_term=GO:0008483,GO:0016740;gbkey=CDS;go_function=transaminase activity|0008483||IEA,transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459595.1;locus_tag=O5D79_002593;product=pyridoxal phosphate-dependent aminotransferase;protein_id=HJH9164065.1;transl_table=11 DALFDJ020000012.1 tpg gene 75525 76142 . - . ID=gene-O5D79_002594;Name=O5D79_002594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002594 DALFDJ020000012.1 Protein Homology CDS 75525 76142 . - 0 ID=cds-HJH9164066.1;Parent=gene-O5D79_002594;Dbxref=NCBI_GP:HJH9164066.1;Name=HJH9164066.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459596.1;locus_tag=O5D79_002594;product=IbrB-like domain-containing protein;protein_id=HJH9164066.1;transl_table=11 DALFDJ020000012.1 tpg gene 76115 77350 . - . ID=gene-O5D79_002595;Name=O5D79_002595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002595 DALFDJ020000012.1 Protein Homology CDS 76115 77350 . - 0 ID=cds-HJH9164067.1;Parent=gene-O5D79_002595;Dbxref=NCBI_GP:HJH9164067.1;Name=HJH9164067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459597.1;locus_tag=O5D79_002595;product=phosphoadenosine phosphosulfate reductase;protein_id=HJH9164067.1;transl_table=11 DALFDJ020000012.1 tpg gene 77515 78417 . - . ID=gene-O5D79_002596;Name=citR;gbkey=Gene;gene=citR;gene_biotype=protein_coding;locus_tag=O5D79_002596 DALFDJ020000012.1 Protein Homology CDS 77515 78417 . - 0 ID=cds-HJH9164068.1;Parent=gene-O5D79_002596;Dbxref=NCBI_GP:HJH9164068.1;Name=HJH9164068.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=citR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459598.1;locus_tag=O5D79_002596;product=DNA-binding transcriptional repressor CitR;protein_id=HJH9164068.1;transl_table=11 DALFDJ020000012.1 tpg gene 78734 79480 . - . ID=gene-O5D79_002597;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=O5D79_002597 DALFDJ020000012.1 Protein Homology CDS 78734 79480 . - 0 ID=cds-HJH9164069.1;Parent=gene-O5D79_002597;Dbxref=NCBI_GP:HJH9164069.1;Name=HJH9164069.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459599.1;locus_tag=O5D79_002597;product=thiol:disulfide interchange protein DsbG;protein_id=HJH9164069.1;transl_table=11 DALFDJ020000012.1 tpg gene 79921 80484 . + . ID=gene-O5D79_002598;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=O5D79_002598 DALFDJ020000012.1 Protein Homology CDS 79921 80484 . + 0 ID=cds-HJH9164070.1;Parent=gene-O5D79_002598;Dbxref=NCBI_GP:HJH9164070.1;Name=HJH9164070.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=O5D79_002598;product=alkyl hydroperoxide reductase subunit C;protein_id=HJH9164070.1;transl_table=11 DALFDJ020000012.1 tpg gene 80726 82291 . + . ID=gene-O5D79_002599;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=O5D79_002599 DALFDJ020000012.1 Protein Homology CDS 80726 82291 . + 0 ID=cds-HJH9164071.1;Parent=gene-O5D79_002599;Dbxref=NCBI_GP:HJH9164071.1;Name=HJH9164071.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459601.1;locus_tag=O5D79_002599;product=alkyl hydroperoxide reductase subunit F;protein_id=HJH9164071.1;transl_table=11 DALFDJ020000012.1 tpg gene 82624 83184 . + . ID=gene-O5D79_002600;Name=O5D79_002600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002600 DALFDJ020000012.1 Protein Homology CDS 82624 83184 . + 0 ID=cds-HJH9164072.1;Parent=gene-O5D79_002600;Dbxref=NCBI_GP:HJH9164072.1;Name=HJH9164072.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459602.1;locus_tag=O5D79_002600;product=TorD/DmsD family molecular chaperone;protein_id=HJH9164072.1;transl_table=11 DALFDJ020000012.1 tpg gene 83177 85456 . + . ID=gene-O5D79_002601;Name=O5D79_002601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002601 DALFDJ020000012.1 Protein Homology CDS 83177 85456 . + 0 ID=cds-HJH9164073.1;Parent=gene-O5D79_002601;Dbxref=NCBI_GP:HJH9164073.1;Name=HJH9164073.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459603.1;locus_tag=O5D79_002601;product=molybdopterin-dependent oxidoreductase;protein_id=HJH9164073.1;transl_table=11 DALFDJ020000012.1 tpg gene 85453 86010 . + . ID=gene-O5D79_002602;Name=O5D79_002602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002602 DALFDJ020000012.1 Protein Homology CDS 85453 86010 . + 0 ID=cds-HJH9164074.1;Parent=gene-O5D79_002602;Dbxref=NCBI_GP:HJH9164074.1;Name=HJH9164074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459604.1;locus_tag=O5D79_002602;product=4Fe-4S dicluster domain-containing protein;protein_id=HJH9164074.1;transl_table=11 DALFDJ020000012.1 tpg gene 86010 86777 . + . ID=gene-O5D79_002603;Name=O5D79_002603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002603 DALFDJ020000012.1 Protein Homology CDS 86010 86777 . + 0 ID=cds-HJH9164075.1;Parent=gene-O5D79_002603;Dbxref=NCBI_GP:HJH9164075.1;Name=HJH9164075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459605.1;locus_tag=O5D79_002603;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=HJH9164075.1;transl_table=11 DALFDJ020000012.1 tpg gene 86845 87273 . - . ID=gene-O5D79_002604;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=O5D79_002604 DALFDJ020000012.1 Protein Homology CDS 86845 87273 . - 0 ID=cds-HJH9164076.1;Parent=gene-O5D79_002604;Dbxref=NCBI_GP:HJH9164076.1;Name=HJH9164076.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459606.1;locus_tag=O5D79_002604;product=universal stress protein UspG;protein_id=HJH9164076.1;transl_table=11 DALFDJ020000012.1 tpg gene 87496 88734 . + . ID=gene-O5D79_002605;Name=O5D79_002605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002605 DALFDJ020000012.1 Protein Homology CDS 87496 88734 . + 0 ID=cds-HJH9164077.1;Parent=gene-O5D79_002605;Dbxref=NCBI_GP:HJH9164077.1;Name=HJH9164077.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459607.1;locus_tag=O5D79_002605;product=zinc-dependent alcohol dehydrogenase;protein_id=HJH9164077.1;transl_table=11 DALFDJ020000012.1 tpg gene 88817 89227 . - . ID=gene-O5D79_002606;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=O5D79_002606 DALFDJ020000012.1 Protein Homology CDS 88817 89227 . - 0 ID=cds-HJH9164078.1;Parent=gene-O5D79_002606;Dbxref=NCBI_GP:HJH9164078.1;Name=HJH9164078.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459608.1;locus_tag=O5D79_002606;product=nucleoside diphosphate kinase regulator;protein_id=HJH9164078.1;transl_table=11 DALFDJ020000012.1 tpg gene 89462 90268 . - . ID=gene-O5D79_002607;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=O5D79_002607 DALFDJ020000012.1 Protein Homology CDS 89462 90268 . - 0 ID=cds-HJH9164079.1;Parent=gene-O5D79_002607;Dbxref=NCBI_GP:HJH9164079.1;Name=HJH9164079.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459609.1;locus_tag=O5D79_002607;product=ribonuclease I;protein_id=HJH9164079.1;transl_table=11 DALFDJ020000012.1 tpg gene 90378 91841 . - . ID=gene-O5D79_002608;Name=O5D79_002608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002608 DALFDJ020000012.1 Protein Homology CDS 90378 91841 . - 0 ID=cds-HJH9164080.1;Parent=gene-O5D79_002608;Dbxref=NCBI_GP:HJH9164080.1;Name=HJH9164080.1;Ontology_term=GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459610.1;locus_tag=O5D79_002608;product=anion permease;protein_id=HJH9164080.1;transl_table=11 DALFDJ020000012.1 tpg gene 91879 92775 . - . ID=gene-O5D79_002609;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=O5D79_002609 DALFDJ020000012.1 Protein Homology CDS 91879 92775 . - 0 ID=cds-HJH9164081.1;Parent=gene-O5D79_002609;Dbxref=NCBI_GP:HJH9164081.1;Name=HJH9164081.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459611.1;locus_tag=O5D79_002609;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=HJH9164081.1;transl_table=11 DALFDJ020000012.1 tpg gene 92747 93298 . - . ID=gene-O5D79_002610;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=O5D79_002610 DALFDJ020000012.1 Protein Homology CDS 92747 93298 . - 0 ID=cds-HJH9164082.1;Parent=gene-O5D79_002610;Dbxref=NCBI_GP:HJH9164082.1;Name=HJH9164082.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459612.1;locus_tag=O5D79_002610;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=HJH9164082.1;transl_table=11 DALFDJ020000012.1 tpg gene 93302 94831 . - . ID=gene-O5D79_002611;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=O5D79_002611 DALFDJ020000012.1 Protein Homology CDS 93302 94831 . - 0 ID=cds-HJH9164083.1;Parent=gene-O5D79_002611;Dbxref=NCBI_GP:HJH9164083.1;Name=HJH9164083.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459613.1;locus_tag=O5D79_002611;product=citrate lyase subunit alpha;protein_id=HJH9164083.1;transl_table=11 DALFDJ020000012.1 tpg gene 94841 95749 . - . ID=gene-O5D79_002612;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=O5D79_002612 DALFDJ020000012.1 Protein Homology CDS 94841 95749 . - 0 ID=cds-HJH9164084.1;Parent=gene-O5D79_002612;Dbxref=NCBI_GP:HJH9164084.1;Name=HJH9164084.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459614.1;locus_tag=O5D79_002612;product=citrate (pro-3S)-lyase subunit beta;protein_id=HJH9164084.1;transl_table=11 DALFDJ020000012.1 tpg gene 95746 96042 . - . ID=gene-O5D79_002613;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=O5D79_002613 DALFDJ020000012.1 Protein Homology CDS 95746 96042 . - 0 ID=cds-HJH9164085.1;Parent=gene-O5D79_002613;Dbxref=NCBI_GP:HJH9164085.1;Name=HJH9164085.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459615.1;locus_tag=O5D79_002613;product=citrate lyase acyl carrier protein;protein_id=HJH9164085.1;transl_table=11 DALFDJ020000012.1 tpg gene 96039 97115 . - . ID=gene-O5D79_002614;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=O5D79_002614 DALFDJ020000012.1 Protein Homology CDS 96039 97115 . - 0 ID=cds-HJH9164086.1;Parent=gene-O5D79_002614;Dbxref=NCBI_GP:HJH9164086.1;Name=HJH9164086.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459616.1;locus_tag=O5D79_002614;product=[citrate (pro-3S)-lyase] ligase;protein_id=HJH9164086.1;transl_table=11 DALFDJ020000012.1 tpg gene 97500 99161 . + . ID=gene-O5D79_002615;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=O5D79_002615 DALFDJ020000012.1 Protein Homology CDS 97500 99161 . + 0 ID=cds-HJH9164087.1;Parent=gene-O5D79_002615;Dbxref=NCBI_GP:HJH9164087.1;Name=HJH9164087.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459617.1;locus_tag=O5D79_002615;product=sensor histidine kinase DpiB;protein_id=HJH9164087.1;transl_table=11 DALFDJ020000012.1 tpg gene 99130 99810 . + . ID=gene-O5D79_002616;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=O5D79_002616 DALFDJ020000012.1 Protein Homology CDS 99130 99810 . + 0 ID=cds-HJH9164088.1;Parent=gene-O5D79_002616;Dbxref=NCBI_GP:HJH9164088.1;Name=HJH9164088.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459618.1;locus_tag=O5D79_002616;product=two-component response regulator DpiA;protein_id=HJH9164088.1;transl_table=11 DALFDJ020000012.1 tpg gene 99861 101249 . - . ID=gene-O5D79_002617;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=O5D79_002617 DALFDJ020000012.1 Protein Homology CDS 99861 101249 . - 0 ID=cds-HJH9164089.1;Parent=gene-O5D79_002617;Dbxref=NCBI_GP:HJH9164089.1;Name=HJH9164089.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459619.1;locus_tag=O5D79_002617;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=HJH9164089.1;transl_table=11 DALFDJ020000012.1 tpg gene 101626 102198 . + . ID=gene-O5D79_002618;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=O5D79_002618 DALFDJ020000012.1 Protein Homology CDS 101626 102198 . + 0 ID=cds-HJH9164090.1;Parent=gene-O5D79_002618;Dbxref=NCBI_GP:HJH9164090.1;Name=HJH9164090.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459620.1;locus_tag=O5D79_002618;product=lipid IV(A) palmitoyltransferase PagP;protein_id=HJH9164090.1;transl_table=11 DALFDJ020000012.1 tpg gene 102386 102595 . + . ID=gene-O5D79_002619;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=O5D79_002619 DALFDJ020000012.1 Protein Homology CDS 102386 102595 . + 0 ID=cds-HJH9164091.1;Parent=gene-O5D79_002619;Dbxref=NCBI_GP:HJH9164091.1;Name=HJH9164091.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459621.1;locus_tag=O5D79_002619;product=transcription antiterminator/RNA stability regulator CspE;protein_id=HJH9164091.1;transl_table=11 DALFDJ020000012.1 tpg gene 102653 103036 . - . ID=gene-O5D79_002620;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=O5D79_002620 DALFDJ020000012.1 Protein Homology CDS 102653 103036 . - 0 ID=cds-HJH9164092.1;Parent=gene-O5D79_002620;Dbxref=NCBI_GP:HJH9164092.1;Name=HJH9164092.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459622.1;locus_tag=O5D79_002620;product=fluoride efflux transporter CrcB;protein_id=HJH9164092.1;transl_table=11 DALFDJ020000012.1 tpg gene 103127 103915 . + . ID=gene-O5D79_002621;Name=O5D79_002621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002621 DALFDJ020000012.1 Protein Homology CDS 103127 103915 . + 0 ID=cds-HJH9164093.1;Parent=gene-O5D79_002621;Dbxref=NCBI_GP:HJH9164093.1;Name=HJH9164093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459623.1;locus_tag=O5D79_002621;product=deaminated glutathione amidase;protein_id=HJH9164093.1;transl_table=11 DALFDJ020000012.1 tpg gene 104044 104247 . + . ID=gene-O5D79_002622;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=O5D79_002622 DALFDJ020000012.1 Protein Homology CDS 104044 104247 . + 0 ID=cds-HJH9164094.1;Parent=gene-O5D79_002622;Dbxref=NCBI_GP:HJH9164094.1;Name=HJH9164094.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459624.1;locus_tag=O5D79_002622;product=twin-arginine translocase subunit TatE;protein_id=HJH9164094.1;transl_table=11 DALFDJ020000012.1 tpg gene 104333 105298 . - . ID=gene-O5D79_002623;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=O5D79_002623 DALFDJ020000012.1 Protein Homology CDS 104333 105298 . - 0 ID=cds-HJH9164095.1;Parent=gene-O5D79_002623;Dbxref=NCBI_GP:HJH9164095.1;Name=HJH9164095.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=O5D79_002623;product=lipoyl synthase;protein_id=HJH9164095.1;transl_table=11 DALFDJ020000012.1 tpg gene 105504 106457 . - . ID=gene-O5D79_002624;Name=O5D79_002624;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002624 DALFDJ020000012.1 Protein Homology CDS 105504 106457 . - 0 ID=cds-HJH9164096.1;Parent=gene-O5D79_002624;Dbxref=NCBI_GP:HJH9164096.1;Name=HJH9164096.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459626.1;locus_tag=O5D79_002624;product=YbeF family transcriptional regulator;protein_id=HJH9164096.1;transl_table=11 DALFDJ020000012.1 tpg gene 106759 107400 . - . ID=gene-O5D79_002625;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=O5D79_002625 DALFDJ020000012.1 Protein Homology CDS 106759 107400 . - 0 ID=cds-HJH9164097.1;Parent=gene-O5D79_002625;Dbxref=NCBI_GP:HJH9164097.1;Name=HJH9164097.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=O5D79_002625;product=lipoyl(octanoyl) transferase LipB;protein_id=HJH9164097.1;transl_table=11 DALFDJ020000012.1 tpg gene 107500 107763 . - . ID=gene-O5D79_002626;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=O5D79_002626 DALFDJ020000012.1 Protein Homology CDS 107500 107763 . - 0 ID=cds-HJH9164098.1;Parent=gene-O5D79_002626;Dbxref=NCBI_GP:HJH9164098.1;Name=HJH9164098.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459628.1;locus_tag=O5D79_002626;product=DUF493 family protein YbeD;protein_id=HJH9164098.1;transl_table=11 DALFDJ020000012.1 tpg gene 107871 109082 . - . ID=gene-O5D79_002627;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=O5D79_002627 DALFDJ020000012.1 Protein Homology CDS 107871 109082 . - 0 ID=cds-HJH9164099.1;Parent=gene-O5D79_002627;Dbxref=NCBI_GP:HJH9164099.1;Name=HJH9164099.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=O5D79_002627;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=HJH9164099.1;transl_table=11 DALFDJ020000012.1 tpg gene 109222 110355 . - . ID=gene-O5D79_002628;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=O5D79_002628 DALFDJ020000012.1 Protein Homology CDS 109222 110355 . - 0 ID=cds-HJH9164100.1;Parent=gene-O5D79_002628;Dbxref=NCBI_GP:HJH9164100.1;Name=HJH9164100.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459630.1;locus_tag=O5D79_002628;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=HJH9164100.1;transl_table=11 DALFDJ020000012.1 tpg gene 110366 111478 . - . ID=gene-O5D79_002629;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=O5D79_002629 DALFDJ020000012.1 Protein Homology CDS 110366 111478 . - 0 ID=cds-HJH9164101.1;Parent=gene-O5D79_002629;Dbxref=NCBI_GP:HJH9164101.1;Name=HJH9164101.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=O5D79_002629;product=peptidoglycan glycosyltransferase MrdB;protein_id=HJH9164101.1;transl_table=11 DALFDJ020000012.1 tpg gene 111481 113382 . - . ID=gene-O5D79_002630;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=O5D79_002630 DALFDJ020000012.1 Protein Homology CDS 111481 113382 . - 0 ID=cds-HJH9164102.1;Parent=gene-O5D79_002630;Dbxref=NCBI_GP:HJH9164102.1;Name=HJH9164102.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=O5D79_002630;product=peptidoglycan DD-transpeptidase MrdA;protein_id=HJH9164102.1;transl_table=11 DALFDJ020000012.1 tpg gene 113413 113880 . - . ID=gene-O5D79_002631;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=O5D79_002631 DALFDJ020000012.1 Protein Homology CDS 113413 113880 . - 0 ID=cds-HJH9164103.1;Parent=gene-O5D79_002631;Dbxref=NCBI_GP:HJH9164103.1;Name=HJH9164103.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=O5D79_002631;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=HJH9164103.1;transl_table=11 DALFDJ020000012.1 tpg gene 113884 114201 . - . ID=gene-O5D79_002632;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=O5D79_002632 DALFDJ020000012.1 Protein Homology CDS 113884 114201 . - 0 ID=cds-HJH9164104.1;Parent=gene-O5D79_002632;Dbxref=NCBI_GP:HJH9164104.1;Name=HJH9164104.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=O5D79_002632;product=ribosome silencing factor;protein_id=HJH9164104.1;transl_table=11 DALFDJ020000012.1 tpg gene 114530 115138 . - . ID=gene-O5D79_002633;Name=O5D79_002633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002633 DALFDJ020000012.1 Protein Homology CDS 114530 115138 . - 0 ID=cds-HJH9164105.1;Parent=gene-O5D79_002633;Dbxref=NCBI_GP:HJH9164105.1;Name=HJH9164105.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459635.1;locus_tag=O5D79_002633;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=HJH9164105.1;transl_table=11 DALFDJ020000012.1 tpg gene 115235 116329 . + . ID=gene-O5D79_002634;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=O5D79_002634 DALFDJ020000012.1 Protein Homology CDS 115235 116329 . + 0 ID=cds-HJH9164106.1;Parent=gene-O5D79_002634;Dbxref=NCBI_GP:HJH9164106.1;Name=HJH9164106.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;gene=cobD;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459636.1;locus_tag=O5D79_002634;product=threonine-phosphate decarboxylase CobD;protein_id=HJH9164106.1;transl_table=11 DALFDJ020000012.1 tpg gene 116304 116945 . - . ID=gene-O5D79_002635;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=O5D79_002635 DALFDJ020000012.1 Protein Homology CDS 116304 116945 . - 0 ID=cds-HJH9164107.1;Parent=gene-O5D79_002635;Dbxref=NCBI_GP:HJH9164107.1;Name=HJH9164107.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459637.1;locus_tag=O5D79_002635;product=nicotinate-nucleotide adenylyltransferase;protein_id=HJH9164107.1;transl_table=11 DALFDJ020000012.1 tpg gene 116947 117978 . - . ID=gene-O5D79_002636;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=O5D79_002636 DALFDJ020000012.1 Protein Homology CDS 116947 117978 . - 0 ID=cds-HJH9164108.1;Parent=gene-O5D79_002636;Dbxref=NCBI_GP:HJH9164108.1;Name=HJH9164108.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459638.1;locus_tag=O5D79_002636;product=DNA polymerase III subunit delta;protein_id=HJH9164108.1;transl_table=11 DALFDJ020000012.1 tpg gene 117978 118568 . - . ID=gene-O5D79_002637;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=O5D79_002637 DALFDJ020000012.1 Protein Homology CDS 117978 118568 . - 0 ID=cds-HJH9164109.1;Parent=gene-O5D79_002637;Dbxref=NCBI_GP:HJH9164109.1;Name=HJH9164109.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459639.1;locus_tag=O5D79_002637;product=LPS assembly lipoprotein LptE;protein_id=HJH9164109.1;transl_table=11 DALFDJ020000012.1 tpg gene 118583 121165 . - . ID=gene-O5D79_002638;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=O5D79_002638 DALFDJ020000012.1 Protein Homology CDS 118583 121165 . - 0 ID=cds-HJH9164110.1;Parent=gene-O5D79_002638;Dbxref=NCBI_GP:HJH9164110.1;Name=HJH9164110.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=O5D79_002638;product=leucine--tRNA ligase;protein_id=HJH9164110.1;transl_table=11 DALFDJ020000012.1 tpg gene 121402 121743 . + . ID=gene-O5D79_002639;Name=O5D79_002639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002639 DALFDJ020000012.1 Protein Homology CDS 121402 121743 . + 0 ID=cds-HJH9164111.1;Parent=gene-O5D79_002639;Dbxref=NCBI_GP:HJH9164111.1;Name=HJH9164111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447100.1;locus_tag=O5D79_002639;product=UxaA family hydrolase;protein_id=HJH9164111.1;transl_table=11 DALFDJ020000012.1 tpg gene 121760 122932 . + . ID=gene-O5D79_002640;Name=O5D79_002640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002640 DALFDJ020000012.1 Protein Homology CDS 121760 122932 . + 0 ID=cds-HJH9164112.1;Parent=gene-O5D79_002640;Dbxref=NCBI_GP:HJH9164112.1;Name=HJH9164112.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447101.1;locus_tag=O5D79_002640;product=UxaA family hydrolase;protein_id=HJH9164112.1;transl_table=11 DALFDJ020000012.1 tpg gene 122982 123935 . + . ID=gene-O5D79_002641;Name=O5D79_002641;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002641 DALFDJ020000012.1 Protein Homology CDS 122982 123935 . + 0 ID=cds-HJH9164113.1;Parent=gene-O5D79_002641;Dbxref=NCBI_GP:HJH9164113.1;Name=HJH9164113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459643.1;locus_tag=O5D79_002641;product=2-keto-3-deoxygluconate permease 2;protein_id=HJH9164113.1;transl_table=11 DALFDJ020000012.1 tpg gene 124003 125931 . + . ID=gene-O5D79_002642;Name=O5D79_002642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002642 DALFDJ020000012.1 Protein Homology CDS 124003 125931 . + 0 ID=cds-HJH9164114.1;Parent=gene-O5D79_002642;Dbxref=NCBI_GP:HJH9164114.1;Name=HJH9164114.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459644.1;locus_tag=O5D79_002642;product=sigma 54-interacting transcriptional regulator;protein_id=HJH9164114.1;transl_table=11 DALFDJ020000012.1 tpg gene 126024 126497 . + . ID=gene-O5D79_002643;Name=O5D79_002643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002643 DALFDJ020000012.1 Protein Homology CDS 126024 126497 . + 0 ID=cds-HJH9164115.1;Parent=gene-O5D79_002643;Dbxref=NCBI_GP:HJH9164115.1;Name=HJH9164115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=O5D79_002643;product=zinc ribbon-containing protein;protein_id=HJH9164115.1;transl_table=11 DALFDJ020000012.1 tpg gene 126579 127520 . + . ID=gene-O5D79_002644;Name=O5D79_002644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002644 DALFDJ020000012.1 Protein Homology CDS 126579 127520 . + 0 ID=cds-HJH9164116.1;Parent=gene-O5D79_002644;Dbxref=NCBI_GP:HJH9164116.1;Name=HJH9164116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001100314.1;locus_tag=O5D79_002644;product=hypothetical protein;protein_id=HJH9164116.1;transl_table=11 DALFDJ020000012.1 tpg gene 127549 128547 . - . ID=gene-O5D79_002645;Name=O5D79_002645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002645 DALFDJ020000012.1 Protein Homology CDS 127549 128547 . - 0 ID=cds-HJH9164117.1;Parent=gene-O5D79_002645;Dbxref=NCBI_GP:HJH9164117.1;Name=HJH9164117.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459646.1;locus_tag=O5D79_002645;product=tetratricopeptide repeat protein;protein_id=HJH9164117.1;transl_table=11 DALFDJ020000012.1 tpg gene 128672 129379 . + . ID=gene-O5D79_002646;Name=O5D79_002646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002646 DALFDJ020000012.1 Protein Homology CDS 128672 129379 . + 0 ID=cds-HJH9164118.1;Parent=gene-O5D79_002646;Dbxref=NCBI_GP:HJH9164118.1;Name=HJH9164118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459647.1;locus_tag=O5D79_002646;product=DUF1266 domain-containing protein;protein_id=HJH9164118.1;transl_table=11 DALFDJ020000012.1 tpg gene 129376 130809 . + . ID=gene-O5D79_002647;Name=O5D79_002647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002647 DALFDJ020000012.1 Protein Homology CDS 129376 130809 . + 0 ID=cds-HJH9164119.1;Parent=gene-O5D79_002647;Dbxref=NCBI_GP:HJH9164119.1;Name=HJH9164119.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459648.1;locus_tag=O5D79_002647;product=J domain-containing protein;protein_id=HJH9164119.1;transl_table=11 DALFDJ020000012.1 tpg gene 130821 131525 . + . ID=gene-O5D79_002648;Name=O5D79_002648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002648 DALFDJ020000012.1 Protein Homology CDS 130821 131525 . + 0 ID=cds-HJH9164120.1;Parent=gene-O5D79_002648;Dbxref=NCBI_GP:HJH9164120.1;Name=HJH9164120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459649.1;locus_tag=O5D79_002648;product=DUF1266 domain-containing protein;protein_id=HJH9164120.1;transl_table=11 DALFDJ020000012.1 tpg gene 131522 132985 . + . ID=gene-O5D79_002649;Name=O5D79_002649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002649 DALFDJ020000012.1 Protein Homology CDS 131522 132985 . + 0 ID=cds-HJH9164121.1;Parent=gene-O5D79_002649;Dbxref=NCBI_GP:HJH9164121.1;Name=HJH9164121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459650.1;locus_tag=O5D79_002649;product=J domain-containing protein;protein_id=HJH9164121.1;transl_table=11 DALFDJ020000012.1 tpg gene 133007 134686 . - . ID=gene-O5D79_002650;Name=hscC;gbkey=Gene;gene=hscC;gene_biotype=protein_coding;locus_tag=O5D79_002650 DALFDJ020000012.1 Protein Homology CDS 133007 134686 . - 0 ID=cds-HJH9164122.1;Parent=gene-O5D79_002650;Dbxref=NCBI_GP:HJH9164122.1;Name=HJH9164122.1;gbkey=CDS;gene=hscC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459651.1;locus_tag=O5D79_002650;product=molecular chaperone HscC;protein_id=HJH9164122.1;transl_table=11 DALFDJ020000012.1 tpg gene 134762 136000 . - . ID=gene-O5D79_002651;Name=O5D79_002651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002651 DALFDJ020000012.1 Protein Homology CDS 134762 136000 . - 0 ID=cds-HJH9164123.1;Parent=gene-O5D79_002651;Dbxref=NCBI_GP:HJH9164123.1;Name=HJH9164123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459652.1;locus_tag=O5D79_002651;product=hypothetical protein;protein_id=HJH9164123.1;transl_table=11 DALFDJ020000012.1 tpg gene 136032 136967 . - . ID=gene-O5D79_002652;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=O5D79_002652 DALFDJ020000012.1 Protein Homology CDS 136032 136967 . - 0 ID=cds-HJH9164124.1;Parent=gene-O5D79_002652;Dbxref=NCBI_GP:HJH9164124.1;Name=HJH9164124.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459653.1;locus_tag=O5D79_002652;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=HJH9164124.1;transl_table=11 DALFDJ020000012.1 tpg gene 137084 137809 . - . ID=gene-O5D79_002653;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=O5D79_002653 DALFDJ020000012.1 Protein Homology CDS 137084 137809 . - 0 ID=cds-HJH9164125.1;Parent=gene-O5D79_002653;Dbxref=NCBI_GP:HJH9164125.1;Name=HJH9164125.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=O5D79_002653;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=HJH9164125.1;transl_table=11 DALFDJ020000012.1 tpg gene 137809 138483 . - . ID=gene-O5D79_002654;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=O5D79_002654 DALFDJ020000012.1 Protein Homology CDS 137809 138483 . - 0 ID=cds-HJH9164126.1;Parent=gene-O5D79_002654;Dbxref=NCBI_GP:HJH9164126.1;Name=HJH9164126.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459655.1;locus_tag=O5D79_002654;product=glutamate/aspartate ABC transporter permease GltK;protein_id=HJH9164126.1;transl_table=11 DALFDJ020000012.1 tpg gene 138483 139223 . - . ID=gene-O5D79_002655;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=O5D79_002655 DALFDJ020000012.1 Protein Homology CDS 138483 139223 . - 0 ID=cds-HJH9164127.1;Parent=gene-O5D79_002655;Dbxref=NCBI_GP:HJH9164127.1;Name=HJH9164127.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459656.1;locus_tag=O5D79_002655;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=HJH9164127.1;transl_table=11 DALFDJ020000012.1 tpg gene 139383 140291 . - . ID=gene-O5D79_002656;Name=O5D79_002656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002656 DALFDJ020000012.1 Protein Homology CDS 139383 140291 . - 0 ID=cds-HJH9164128.1;Parent=gene-O5D79_002656;Dbxref=NCBI_GP:HJH9164128.1;Name=HJH9164128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=O5D79_002656;product=amino acid ABC transporter substrate-binding protein;protein_id=HJH9164128.1;transl_table=11 DALFDJ020000012.1 tpg gene 140709 142247 . - . ID=gene-O5D79_002657;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=O5D79_002657 DALFDJ020000012.1 Protein Homology CDS 140709 142247 . - 0 ID=cds-HJH9164129.1;Parent=gene-O5D79_002657;Dbxref=NCBI_GP:HJH9164129.1;Name=HJH9164129.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=O5D79_002657;product=apolipoprotein N-acyltransferase;protein_id=HJH9164129.1;transl_table=11 DALFDJ020000012.1 tpg gene 142267 143145 . - . ID=gene-O5D79_002658;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=O5D79_002658 DALFDJ020000012.1 Protein Homology CDS 142267 143145 . - 0 ID=cds-HJH9164130.1;Parent=gene-O5D79_002658;Dbxref=NCBI_GP:HJH9164130.1;Name=HJH9164130.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459659.1;locus_tag=O5D79_002658;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=HJH9164130.1;transl_table=11 DALFDJ020000012.1 tpg gene 143303 143776 . - . ID=gene-O5D79_002659;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=O5D79_002659 DALFDJ020000012.1 Protein Homology CDS 143303 143776 . - 0 ID=cds-HJH9164131.1;Parent=gene-O5D79_002659;Dbxref=NCBI_GP:HJH9164131.1;Name=HJH9164131.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459660.1;locus_tag=O5D79_002659;product=rRNA maturation RNase YbeY;protein_id=HJH9164131.1;transl_table=11 DALFDJ020000012.1 tpg gene 143773 144819 . - . ID=gene-O5D79_002660;Name=O5D79_002660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002660 DALFDJ020000012.1 Protein Homology CDS 143773 144819 . - 0 ID=cds-HJH9164132.1;Parent=gene-O5D79_002660;Dbxref=NCBI_GP:HJH9164132.1;Name=HJH9164132.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=O5D79_002660;product=PhoH family protein;protein_id=HJH9164132.1;transl_table=11 DALFDJ020000012.1 tpg gene 145024 146448 . - . ID=gene-O5D79_002661;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=O5D79_002661 DALFDJ020000012.1 Protein Homology CDS 145024 146448 . - 0 ID=cds-HJH9164133.1;Parent=gene-O5D79_002661;Dbxref=NCBI_GP:HJH9164133.1;Name=HJH9164133.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459662.1;locus_tag=O5D79_002661;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=HJH9164133.1;transl_table=11 DALFDJ020000012.1 tpg gene 146592 147767 . + . ID=gene-O5D79_002662;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=O5D79_002662 DALFDJ020000012.1 Protein Homology CDS 146592 147767 . + 0 ID=cds-HJH9164134.1;Parent=gene-O5D79_002662;Dbxref=NCBI_GP:HJH9164134.1;Name=HJH9164134.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=O5D79_002662;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=HJH9164134.1;transl_table=11 DALFDJ020000012.1 tpg gene 147900 147974 . - . ID=gene-O5D79_002663;Name=O5D79_002663;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_002663 DALFDJ020000012.1 tRNAscan-SE tRNA 147900 147974 . - . ID=rna-O5D79_002663;Parent=gene-O5D79_002663;anticodon=(pos:complement(147940..147942));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002663;product=tRNA-Gln DALFDJ020000012.1 tRNAscan-SE exon 147900 147974 . - . ID=exon-O5D79_002663-1;Parent=rna-O5D79_002663;anticodon=(pos:complement(147940..147942));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002663;product=tRNA-Gln DALFDJ020000012.1 tpg gene 148018 148092 . - . ID=gene-O5D79_002664;Name=O5D79_002664;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_002664 DALFDJ020000012.1 tRNAscan-SE tRNA 148018 148092 . - . ID=rna-O5D79_002664;Parent=gene-O5D79_002664;anticodon=(pos:complement(148058..148060));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002664;product=tRNA-Gln DALFDJ020000012.1 tRNAscan-SE exon 148018 148092 . - . ID=exon-O5D79_002664-1;Parent=rna-O5D79_002664;anticodon=(pos:complement(148058..148060));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002664;product=tRNA-Gln DALFDJ020000012.1 tpg gene 148139 148215 . - . ID=gene-O5D79_002665;Name=O5D79_002665;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_002665 DALFDJ020000012.1 tRNAscan-SE tRNA 148139 148215 . - . ID=rna-O5D79_002665;Parent=gene-O5D79_002665;anticodon=(pos:complement(148179..148181));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002665;product=tRNA-Met DALFDJ020000012.1 tRNAscan-SE exon 148139 148215 . - . ID=exon-O5D79_002665-1;Parent=rna-O5D79_002665;anticodon=(pos:complement(148179..148181));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002665;product=tRNA-Met DALFDJ020000012.1 tpg gene 148231 148305 . - . ID=gene-O5D79_002666;Name=O5D79_002666;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_002666 DALFDJ020000012.1 tRNAscan-SE tRNA 148231 148305 . - . ID=rna-O5D79_002666;Parent=gene-O5D79_002666;anticodon=(pos:complement(148271..148273));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002666;product=tRNA-Gln DALFDJ020000012.1 tRNAscan-SE exon 148231 148305 . - . ID=exon-O5D79_002666-1;Parent=rna-O5D79_002666;anticodon=(pos:complement(148271..148273));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002666;product=tRNA-Gln DALFDJ020000012.1 tpg gene 148341 148415 . - . ID=gene-O5D79_002667;Name=O5D79_002667;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_002667 DALFDJ020000012.1 tRNAscan-SE tRNA 148341 148415 . - . ID=rna-O5D79_002667;Parent=gene-O5D79_002667;anticodon=(pos:complement(148381..148383));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002667;product=tRNA-Gln DALFDJ020000012.1 tRNAscan-SE exon 148341 148415 . - . ID=exon-O5D79_002667-1;Parent=rna-O5D79_002667;anticodon=(pos:complement(148381..148383));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002667;product=tRNA-Gln DALFDJ020000012.1 tpg gene 148439 148523 . - . ID=gene-O5D79_002668;Name=O5D79_002668;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_002668 DALFDJ020000012.1 tRNAscan-SE tRNA 148439 148523 . - . ID=rna-O5D79_002668;Parent=gene-O5D79_002668;anticodon=(pos:complement(148487..148489));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002668;product=tRNA-Leu DALFDJ020000012.1 tRNAscan-SE exon 148439 148523 . - . ID=exon-O5D79_002668-1;Parent=rna-O5D79_002668;anticodon=(pos:complement(148487..148489));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002668;product=tRNA-Leu DALFDJ020000012.1 tpg gene 148532 148608 . - . ID=gene-O5D79_002669;Name=O5D79_002669;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_002669 DALFDJ020000012.1 tRNAscan-SE tRNA 148532 148608 . - . ID=rna-O5D79_002669;Parent=gene-O5D79_002669;anticodon=(pos:complement(148572..148574));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002669;product=tRNA-Met DALFDJ020000012.1 tRNAscan-SE exon 148532 148608 . - . ID=exon-O5D79_002669-1;Parent=rna-O5D79_002669;anticodon=(pos:complement(148572..148574));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002669;product=tRNA-Met DALFDJ020000012.1 tpg gene 148830 150494 . - . ID=gene-O5D79_002670;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=O5D79_002670 DALFDJ020000012.1 Protein Homology CDS 148830 150494 . - 0 ID=cds-HJH9164135.1;Parent=gene-O5D79_002670;Dbxref=NCBI_GP:HJH9164135.1;Name=HJH9164135.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=O5D79_002670;product=asparagine synthase B;protein_id=HJH9164135.1;transl_table=11 DALFDJ020000012.1 tpg gene 150784 151536 . - . ID=gene-O5D79_002671;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=O5D79_002671 DALFDJ020000012.1 Protein Homology CDS 150784 151536 . - 0 ID=cds-HJH9164136.1;Parent=gene-O5D79_002671;Dbxref=NCBI_GP:HJH9164136.1;Name=HJH9164136.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459666.1;locus_tag=O5D79_002671;product=ribonucleotide monophosphatase NagD;protein_id=HJH9164136.1;transl_table=11 DALFDJ020000012.1 tpg gene 151583 152803 . - . ID=gene-O5D79_002672;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=O5D79_002672 DALFDJ020000012.1 Protein Homology CDS 151583 152803 . - 0 ID=cds-HJH9164137.1;Parent=gene-O5D79_002672;Dbxref=NCBI_GP:HJH9164137.1;Name=HJH9164137.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459667.1;locus_tag=O5D79_002672;product=DNA-binding transcriptional regulator NagC;protein_id=HJH9164137.1;transl_table=11 DALFDJ020000012.1 tpg gene 152808 153962 . - . ID=gene-O5D79_002673;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=O5D79_002673 DALFDJ020000012.1 Protein Homology CDS 152808 153962 . - 0 ID=cds-HJH9164138.1;Parent=gene-O5D79_002673;Dbxref=NCBI_GP:HJH9164138.1;Name=HJH9164138.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459668.1;locus_tag=O5D79_002673;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=HJH9164138.1;transl_table=11 DALFDJ020000012.1 tpg gene 154022 154822 . - . ID=gene-O5D79_002674;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=O5D79_002674 DALFDJ020000012.1 Protein Homology CDS 154022 154822 . - 0 ID=cds-HJH9164139.1;Parent=gene-O5D79_002674;Dbxref=NCBI_GP:HJH9164139.1;Name=HJH9164139.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=O5D79_002674;product=glucosamine-6-phosphate deaminase;protein_id=HJH9164139.1;transl_table=11 DALFDJ020000012.1 tpg gene 155149 157101 . + . ID=gene-O5D79_002675;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=O5D79_002675 DALFDJ020000012.1 Protein Homology CDS 155149 157101 . + 0 ID=cds-HJH9164140.1;Parent=gene-O5D79_002675;Dbxref=NCBI_GP:HJH9164140.1;Name=HJH9164140.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459670.1;locus_tag=O5D79_002675;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=HJH9164140.1;transl_table=11 DALFDJ020000012.1 tpg gene 157312 158979 . + . ID=gene-O5D79_002676;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=O5D79_002676 DALFDJ020000012.1 Protein Homology CDS 157312 158979 . + 0 ID=cds-HJH9164141.1;Parent=gene-O5D79_002676;Dbxref=NCBI_GP:HJH9164141.1;Name=HJH9164141.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=O5D79_002676;product=glutamine--tRNA ligase;protein_id=HJH9164141.1;transl_table=11 ##sequence-region DALFDJ020000013.1 1 154173 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000013.1 tpg region 1 154173 . + . ID=DALFDJ020000013.1:1..154173;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000013.1 tpg gene 1 241 . + . ID=gene-O5D79_002677;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=O5D79_002677;partial=true;start_range=.,1 DALFDJ020000013.1 Protein Homology CDS 1 241 . + 1 ID=cds-HJH9164142.1;Parent=gene-O5D79_002677;Dbxref=NCBI_GP:HJH9164142.1;Name=HJH9164142.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459923.1;locus_tag=O5D79_002677;partial=true;product=IS200/IS605-like element IS200F family transposase;protein_id=HJH9164142.1;start_range=.,1;transl_table=11 DALFDJ020000013.1 tpg gene 399 674 . - . ID=gene-O5D79_002678;Name=O5D79_002678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002678 DALFDJ020000013.1 GeneMarkS-2+ CDS 399 674 . - 0 ID=cds-HJH9164143.1;Parent=gene-O5D79_002678;Dbxref=NCBI_GP:HJH9164143.1;Name=HJH9164143.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_002678;product=hypothetical protein;protein_id=HJH9164143.1;transl_table=11 DALFDJ020000013.1 tpg gene 1312 2460 . + . ID=gene-O5D79_002679;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=O5D79_002679 DALFDJ020000013.1 Protein Homology CDS 1312 2460 . + 0 ID=cds-HJH9164144.1;Parent=gene-O5D79_002679;Dbxref=NCBI_GP:HJH9164144.1;Name=HJH9164144.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459071.1;locus_tag=O5D79_002679;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=HJH9164144.1;transl_table=11 DALFDJ020000013.1 tpg gene 2479 5706 . + . ID=gene-O5D79_002680;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=O5D79_002680 DALFDJ020000013.1 Protein Homology CDS 2479 5706 . + 0 ID=cds-HJH9164145.1;Parent=gene-O5D79_002680;Dbxref=NCBI_GP:HJH9164145.1;Name=HJH9164145.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=O5D79_002680;product=carbamoyl-phosphate synthase large subunit;protein_id=HJH9164145.1;transl_table=11 DALFDJ020000013.1 tpg gene 5980 6375 . + . ID=gene-O5D79_002681;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=O5D79_002681 DALFDJ020000013.1 Protein Homology CDS 5980 6375 . + 0 ID=cds-HJH9164146.1;Parent=gene-O5D79_002681;Dbxref=NCBI_GP:HJH9164146.1;Name=HJH9164146.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459073.1;locus_tag=O5D79_002681;product=carnitine metabolism transcriptional regulator CaiF;protein_id=HJH9164146.1;transl_table=11 DALFDJ020000013.1 tpg gene 6453 7049 . - . ID=gene-O5D79_002682;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=O5D79_002682 DALFDJ020000013.1 Protein Homology CDS 6453 7049 . - 0 ID=cds-HJH9164147.1;Parent=gene-O5D79_002682;Dbxref=NCBI_GP:HJH9164147.1;Name=HJH9164147.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459074.1;locus_tag=O5D79_002682;product=carnitine operon protein CaiE;protein_id=HJH9164147.1;transl_table=11 DALFDJ020000013.1 tpg gene 7158 7943 . - . ID=gene-O5D79_002683;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=O5D79_002683 DALFDJ020000013.1 Protein Homology CDS 7158 7943 . - 0 ID=cds-HJH9164148.1;Parent=gene-O5D79_002683;Dbxref=NCBI_GP:HJH9164148.1;Name=HJH9164148.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=O5D79_002683;product=crotonobetainyl-CoA hydratase;protein_id=HJH9164148.1;transl_table=11 DALFDJ020000013.1 tpg gene 7997 9550 . - . ID=gene-O5D79_002684;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=O5D79_002684 DALFDJ020000013.1 Protein Homology CDS 7997 9550 . - 0 ID=cds-HJH9164149.1;Parent=gene-O5D79_002684;Dbxref=NCBI_GP:HJH9164149.1;Name=HJH9164149.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459076.1;locus_tag=O5D79_002684;product=crotonobetaine/carnitine-CoA ligase;protein_id=HJH9164149.1;transl_table=11 DALFDJ020000013.1 tpg gene 9613 10830 . - . ID=gene-O5D79_002685;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=O5D79_002685 DALFDJ020000013.1 Protein Homology CDS 9613 10830 . - 0 ID=cds-HJH9164150.1;Parent=gene-O5D79_002685;Dbxref=NCBI_GP:HJH9164150.1;Name=HJH9164150.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459077.1;locus_tag=O5D79_002685;product=L-carnitine CoA-transferase;protein_id=HJH9164150.1;transl_table=11 DALFDJ020000013.1 tpg gene 10942 12084 . - . ID=gene-O5D79_002686;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=O5D79_002686 DALFDJ020000013.1 Protein Homology CDS 10942 12084 . - 0 ID=cds-HJH9164151.1;Parent=gene-O5D79_002686;Dbxref=NCBI_GP:HJH9164151.1;Name=HJH9164151.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=O5D79_002686;product=crotonobetainyl-CoA dehydrogenase;protein_id=HJH9164151.1;transl_table=11 DALFDJ020000013.1 tpg gene 12119 13636 . - . ID=gene-O5D79_002687;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=O5D79_002687 DALFDJ020000013.1 Protein Homology CDS 12119 13636 . - 0 ID=cds-HJH9164152.1;Parent=gene-O5D79_002687;Dbxref=NCBI_GP:HJH9164152.1;Name=HJH9164152.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459079.1;locus_tag=O5D79_002687;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=HJH9164152.1;transl_table=11 DALFDJ020000013.1 tpg gene 14117 14887 . + . ID=gene-O5D79_002688;Name=O5D79_002688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002688 DALFDJ020000013.1 Protein Homology CDS 14117 14887 . + 0 ID=cds-HJH9164153.1;Parent=gene-O5D79_002688;Dbxref=NCBI_GP:HJH9164153.1;Name=HJH9164153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459080.1;locus_tag=O5D79_002688;product=electron transfer flavoprotein FixA;protein_id=HJH9164153.1;transl_table=11 DALFDJ020000013.1 tpg gene 14903 15844 . + . ID=gene-O5D79_002689;Name=O5D79_002689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002689 DALFDJ020000013.1 Protein Homology CDS 14903 15844 . + 0 ID=cds-HJH9164154.1;Parent=gene-O5D79_002689;Dbxref=NCBI_GP:HJH9164154.1;Name=HJH9164154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459081.1;locus_tag=O5D79_002689;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=HJH9164154.1;transl_table=11 DALFDJ020000013.1 tpg gene 15894 17180 . + . ID=gene-O5D79_002690;Name=O5D79_002690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002690 DALFDJ020000013.1 Protein Homology CDS 15894 17180 . + 0 ID=cds-HJH9164155.1;Parent=gene-O5D79_002690;Dbxref=NCBI_GP:HJH9164155.1;Name=HJH9164155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459082.1;locus_tag=O5D79_002690;product=FAD-dependent oxidoreductase;protein_id=HJH9164155.1;transl_table=11 DALFDJ020000013.1 tpg gene 17177 17464 . + . ID=gene-O5D79_002691;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=O5D79_002691 DALFDJ020000013.1 Protein Homology CDS 17177 17464 . + 0 ID=cds-HJH9164156.1;Parent=gene-O5D79_002691;Dbxref=NCBI_GP:HJH9164156.1;Name=HJH9164156.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459083.1;locus_tag=O5D79_002691;product=ferredoxin-like protein FixX;protein_id=HJH9164156.1;transl_table=11 DALFDJ020000013.1 tpg gene 17611 18951 . + . ID=gene-O5D79_002692;Name=O5D79_002692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002692 DALFDJ020000013.1 Protein Homology CDS 17611 18951 . + 0 ID=cds-HJH9164157.1;Parent=gene-O5D79_002692;Dbxref=NCBI_GP:HJH9164157.1;Name=HJH9164157.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459084.1;locus_tag=O5D79_002692;product=MFS transporter;protein_id=HJH9164157.1;transl_table=11 DALFDJ020000013.1 tpg gene 19040 19270 . + . ID=gene-O5D79_002693;Name=O5D79_002693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002693 DALFDJ020000013.1 Protein Homology CDS 19040 19270 . + 0 ID=cds-HJH9164158.1;Parent=gene-O5D79_002693;Dbxref=NCBI_GP:HJH9164158.1;Name=HJH9164158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459085.1;locus_tag=O5D79_002693;product=YgdI/YgdR family lipoprotein;protein_id=HJH9164158.1;transl_table=11 DALFDJ020000013.1 tpg pseudogene 19297 19391 . + . ID=gene-O5D79_002694;Name=O5D79_002694;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_002694;pseudo=true DALFDJ020000013.1 Protein Homology CDS 19297 19391 . + 0 ID=cds-O5D79_002694;Parent=gene-O5D79_002694;Note=Required for full activity of KefC%2C a potassium-proton antiporter%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=O5D79_002694;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;pseudo=true;transl_table=11 DALFDJ020000013.1 tpg gene 19557 19973 . + . ID=gene-O5D79_002695;Name=O5D79_002695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002695 DALFDJ020000013.1 Protein Homology CDS 19557 19973 . + 0 ID=cds-HJH9164159.1;Parent=gene-O5D79_002695;Dbxref=NCBI_GP:HJH9164159.1;Name=HJH9164159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459086.1;locus_tag=O5D79_002695;product=hypothetical protein;protein_id=HJH9164159.1;transl_table=11 DALFDJ020000013.1 tpg gene 20197 20487 . - . ID=gene-O5D79_002696;Name=srfN;gbkey=Gene;gene=srfN;gene_biotype=protein_coding;locus_tag=O5D79_002696 DALFDJ020000013.1 Protein Homology CDS 20197 20487 . - 0 ID=cds-HJH9164160.1;Parent=gene-O5D79_002696;Dbxref=NCBI_GP:HJH9164160.1;Name=HJH9164160.1;gbkey=CDS;gene=srfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459087.1;locus_tag=O5D79_002696;product=DUF1471 family virulence protein SrfN;protein_id=HJH9164160.1;transl_table=11 DALFDJ020000013.1 tpg gene 21385 23274 . + . ID=gene-O5D79_002697;Name=O5D79_002697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002697 DALFDJ020000013.1 Protein Homology CDS 21385 23274 . + 0 ID=cds-HJH9164161.1;Parent=gene-O5D79_002697;Dbxref=NCBI_GP:HJH9164161.1;Name=HJH9164161.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459089.1;locus_tag=O5D79_002697;product=sulfatase-like hydrolase/transferase;protein_id=HJH9164161.1;transl_table=11 DALFDJ020000013.1 tpg pseudogene 23626 23706 . - . ID=gene-O5D79_002698;Name=O5D79_002698;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_002698;pseudo=true DALFDJ020000013.1 Protein Homology CDS 23626 23706 . - 0 ID=cds-O5D79_002698;Parent=gene-O5D79_002698;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459075.1;locus_tag=O5D79_002698;product=hypothetical protein;pseudo=true;transl_table=11 DALFDJ020000013.1 tpg gene 23828 24358 . + . ID=gene-O5D79_002699;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=O5D79_002699 DALFDJ020000013.1 Protein Homology CDS 23828 24358 . + 0 ID=cds-HJH9164162.1;Parent=gene-O5D79_002699;Dbxref=NCBI_GP:HJH9164162.1;Name=HJH9164162.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459090.1;locus_tag=O5D79_002699;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=HJH9164162.1;transl_table=11 DALFDJ020000013.1 tpg gene 24351 26213 . + . ID=gene-O5D79_002700;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=O5D79_002700 DALFDJ020000013.1 Protein Homology CDS 24351 26213 . + 0 ID=cds-HJH9164163.1;Parent=gene-O5D79_002700;Dbxref=NCBI_GP:HJH9164163.1;Name=HJH9164163.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459091.1;locus_tag=O5D79_002700;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=HJH9164163.1;transl_table=11 DALFDJ020000013.1 tpg gene 26412 26891 . + . ID=gene-O5D79_002701;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=O5D79_002701 DALFDJ020000013.1 Protein Homology CDS 26412 26891 . + 0 ID=cds-HJH9164164.1;Parent=gene-O5D79_002701;Dbxref=NCBI_GP:HJH9164164.1;Name=HJH9164164.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=O5D79_002701;product=type 3 dihydrofolate reductase;protein_id=HJH9164164.1;transl_table=11 DALFDJ020000013.1 tpg gene 26997 27845 . - . ID=gene-O5D79_002702;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=O5D79_002702 DALFDJ020000013.1 Protein Homology CDS 26997 27845 . - 0 ID=cds-HJH9164165.1;Parent=gene-O5D79_002702;Dbxref=NCBI_GP:HJH9164165.1;Name=HJH9164165.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459093.1;locus_tag=O5D79_002702;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=HJH9164165.1;transl_table=11 DALFDJ020000013.1 tpg gene 27856 28233 . - . ID=gene-O5D79_002703;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=O5D79_002703 DALFDJ020000013.1 Protein Homology CDS 27856 28233 . - 0 ID=cds-HJH9164166.1;Parent=gene-O5D79_002703;Dbxref=NCBI_GP:HJH9164166.1;Name=HJH9164166.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=O5D79_002703;product=Co2+/Mg2+ efflux protein ApaG;protein_id=HJH9164166.1;transl_table=11 DALFDJ020000013.1 tpg gene 28236 29057 . - . ID=gene-O5D79_002704;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=O5D79_002704 DALFDJ020000013.1 Protein Homology CDS 28236 29057 . - 0 ID=cds-HJH9164167.1;Parent=gene-O5D79_002704;Dbxref=NCBI_GP:HJH9164167.1;Name=HJH9164167.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459095.1;locus_tag=O5D79_002704;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=HJH9164167.1;transl_table=11 DALFDJ020000013.1 tpg gene 29054 30043 . - . ID=gene-O5D79_002705;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=O5D79_002705 DALFDJ020000013.1 Protein Homology CDS 29054 30043 . - 0 ID=cds-HJH9164168.1;Parent=gene-O5D79_002705;Dbxref=NCBI_GP:HJH9164168.1;Name=HJH9164168.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459096.1;locus_tag=O5D79_002705;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=HJH9164168.1;transl_table=11 DALFDJ020000013.1 tpg gene 30043 31329 . - . ID=gene-O5D79_002706;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=O5D79_002706 DALFDJ020000013.1 Protein Homology CDS 30043 31329 . - 0 ID=cds-HJH9164169.1;Parent=gene-O5D79_002706;Dbxref=NCBI_GP:HJH9164169.1;Name=HJH9164169.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459097.1;locus_tag=O5D79_002706;product=peptidylprolyl isomerase SurA;protein_id=HJH9164169.1;transl_table=11 DALFDJ020000013.1 tpg gene 31383 33743 . - . ID=gene-O5D79_002707;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=O5D79_002707 DALFDJ020000013.1 Protein Homology CDS 31383 33743 . - 0 ID=cds-HJH9164170.1;Parent=gene-O5D79_002707;Dbxref=NCBI_GP:HJH9164170.1;Name=HJH9164170.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=O5D79_002707;product=LPS assembly protein LptD;protein_id=HJH9164170.1;transl_table=11 DALFDJ020000013.1 tpg gene 33997 34809 . + . ID=gene-O5D79_002708;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=O5D79_002708 DALFDJ020000013.1 Protein Homology CDS 33997 34809 . + 0 ID=cds-HJH9164171.1;Parent=gene-O5D79_002708;Dbxref=NCBI_GP:HJH9164171.1;Name=HJH9164171.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459099.1;locus_tag=O5D79_002708;product=co-chaperone DjlA;protein_id=HJH9164171.1;transl_table=11 DALFDJ020000013.1 tpg gene 34904 35563 . - . ID=gene-O5D79_002709;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=O5D79_002709 DALFDJ020000013.1 Protein Homology CDS 34904 35563 . - 0 ID=cds-HJH9164172.1;Parent=gene-O5D79_002709;Dbxref=NCBI_GP:HJH9164172.1;Name=HJH9164172.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459100.1;locus_tag=O5D79_002709;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=HJH9164172.1;transl_table=11 DALFDJ020000013.1 tpg gene 35575 38481 . - . ID=gene-O5D79_002710;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=O5D79_002710 DALFDJ020000013.1 Protein Homology CDS 35575 38481 . - 0 ID=cds-HJH9164173.1;Parent=gene-O5D79_002710;Dbxref=NCBI_GP:HJH9164173.1;Name=HJH9164173.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=O5D79_002710;product=RNA polymerase-associated protein RapA;protein_id=HJH9164173.1;transl_table=11 DALFDJ020000013.1 tpg gene 38655 41006 . - . ID=gene-O5D79_002711;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=O5D79_002711 DALFDJ020000013.1 Protein Homology CDS 38655 41006 . - 0 ID=cds-HJH9164174.1;Parent=gene-O5D79_002711;Dbxref=NCBI_GP:HJH9164174.1;Name=HJH9164174.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459102.1;locus_tag=O5D79_002711;product=DNA polymerase II;protein_id=HJH9164174.1;transl_table=11 DALFDJ020000013.1 tpg pseudogene 41050 41271 . - . ID=gene-O5D79_002712;Name=O5D79_002712;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_002712;pseudo=true DALFDJ020000013.1 Protein Homology CDS 41050 41271 . - 0 ID=cds-O5D79_002712;Parent=gene-O5D79_002712;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=O5D79_002712;product=YdcF family protein;pseudo=true;transl_table=11 DALFDJ020000013.1 tpg gene 41346 41750 . - . ID=gene-O5D79_002713;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=O5D79_002713 DALFDJ020000013.1 Protein Homology CDS 41346 41750 . - 0 ID=cds-HJH9164175.1;Parent=gene-O5D79_002713;Dbxref=NCBI_GP:HJH9164175.1;Name=HJH9164175.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_021141233.1;locus_tag=O5D79_002713;product=IS200/IS605 family transposase;protein_id=HJH9164175.1;transl_table=11 DALFDJ020000013.1 tpg gene 41809 43014 . + . ID=gene-O5D79_002714;Name=O5D79_002714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002714 DALFDJ020000013.1 Protein Homology CDS 41809 43014 . + 0 ID=cds-HJH9164176.1;Parent=gene-O5D79_002714;Dbxref=NCBI_GP:HJH9164176.1;Name=HJH9164176.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001669153.1;locus_tag=O5D79_002714;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=HJH9164176.1;transl_table=11 DALFDJ020000013.1 tpg pseudogene 43090 43488 . - . ID=gene-O5D79_002715;Name=O5D79_002715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_002715;pseudo=true DALFDJ020000013.1 Protein Homology CDS 43090 43488 . - 0 ID=cds-O5D79_002715;Parent=gene-O5D79_002715;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459103.1;locus_tag=O5D79_002715;product=YdcF family protein;pseudo=true;transl_table=11 DALFDJ020000013.1 tpg gene 44006 44425 . + . ID=gene-O5D79_002716;Name=O5D79_002716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002716 DALFDJ020000013.1 Protein Homology CDS 44006 44425 . + 0 ID=cds-HJH9164177.1;Parent=gene-O5D79_002716;Dbxref=NCBI_GP:HJH9164177.1;Name=HJH9164177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459105.1;locus_tag=O5D79_002716;product=DUF4751 family protein;protein_id=HJH9164177.1;transl_table=11 DALFDJ020000013.1 tpg gene 44431 45126 . - . ID=gene-O5D79_002717;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=O5D79_002717 DALFDJ020000013.1 Protein Homology CDS 44431 45126 . - 0 ID=cds-HJH9164178.1;Parent=gene-O5D79_002717;Dbxref=NCBI_GP:HJH9164178.1;Name=HJH9164178.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459106.1;locus_tag=O5D79_002717;product=L-ribulose-5-phosphate 4-epimerase;protein_id=HJH9164178.1;transl_table=11 DALFDJ020000013.1 tpg gene 45267 46769 . - . ID=gene-O5D79_002718;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=O5D79_002718 DALFDJ020000013.1 Protein Homology CDS 45267 46769 . - 0 ID=cds-HJH9164179.1;Parent=gene-O5D79_002718;Dbxref=NCBI_GP:HJH9164179.1;Name=HJH9164179.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459107.1;locus_tag=O5D79_002718;product=L-arabinose isomerase;protein_id=HJH9164179.1;transl_table=11 DALFDJ020000013.1 tpg gene 46780 48489 . - . ID=gene-O5D79_002719;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=O5D79_002719 DALFDJ020000013.1 Protein Homology CDS 46780 48489 . - 0 ID=cds-HJH9164180.1;Parent=gene-O5D79_002719;Dbxref=NCBI_GP:HJH9164180.1;Name=HJH9164180.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459108.1;locus_tag=O5D79_002719;product=ribulokinase;protein_id=HJH9164180.1;transl_table=11 DALFDJ020000013.1 tpg gene 48830 49675 . + . ID=gene-O5D79_002720;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=O5D79_002720 DALFDJ020000013.1 Protein Homology CDS 48830 49675 . + 0 ID=cds-HJH9164181.1;Parent=gene-O5D79_002720;Dbxref=NCBI_GP:HJH9164181.1;Name=HJH9164181.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459109.1;locus_tag=O5D79_002720;product=arabinose operon transcriptional regulator AraC;protein_id=HJH9164181.1;transl_table=11 DALFDJ020000013.1 tpg gene 49794 50561 . + . ID=gene-O5D79_002721;Name=O5D79_002721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002721 DALFDJ020000013.1 Protein Homology CDS 49794 50561 . + 0 ID=cds-HJH9164182.1;Parent=gene-O5D79_002721;Dbxref=NCBI_GP:HJH9164182.1;Name=HJH9164182.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459110.1;locus_tag=O5D79_002721;product=DedA family protein;protein_id=HJH9164182.1;transl_table=11 DALFDJ020000013.1 tpg gene 50600 51307 . - . ID=gene-O5D79_002722;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=O5D79_002722 DALFDJ020000013.1 Protein Homology CDS 50600 51307 . - 0 ID=cds-HJH9164183.1;Parent=gene-O5D79_002722;Dbxref=NCBI_GP:HJH9164183.1;Name=HJH9164183.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459111.1;locus_tag=O5D79_002722;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=HJH9164183.1;transl_table=11 DALFDJ020000013.1 tpg gene 51291 52901 . - . ID=gene-O5D79_002723;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=O5D79_002723 DALFDJ020000013.1 Protein Homology CDS 51291 52901 . - 0 ID=cds-HJH9164184.1;Parent=gene-O5D79_002723;Dbxref=NCBI_GP:HJH9164184.1;Name=HJH9164184.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459112.1;locus_tag=O5D79_002723;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=HJH9164184.1;transl_table=11 DALFDJ020000013.1 tpg gene 52877 53860 . - . ID=gene-O5D79_002724;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=O5D79_002724 DALFDJ020000013.1 Protein Homology CDS 52877 53860 . - 0 ID=cds-HJH9164185.1;Parent=gene-O5D79_002724;Dbxref=NCBI_GP:HJH9164185.1;Name=HJH9164185.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459113.1;locus_tag=O5D79_002724;product=thiamine ABC transporter substrate binding subunit;protein_id=HJH9164185.1;transl_table=11 DALFDJ020000013.1 cmsearch riboswitch 53892 53991 . - . ID=id-DALFDJ020000013.1:53892..53991;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch DALFDJ020000013.1 tpg gene 54038 55696 . - . ID=gene-O5D79_002725;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=O5D79_002725 DALFDJ020000013.1 Protein Homology CDS 54038 55696 . - 0 ID=cds-HJH9164186.1;Parent=gene-O5D79_002725;Dbxref=NCBI_GP:HJH9164186.1;Name=HJH9164186.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459114.1;locus_tag=O5D79_002725;product=HTH-type transcriptional regulator SgrR;protein_id=HJH9164186.1;transl_table=11 DALFDJ020000013.1 tpg gene 55789 55911 . + . ID=gene-O5D79_002726;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=O5D79_002726 DALFDJ020000013.1 Protein Homology CDS 55789 55911 . + 0 ID=cds-HJH9164187.1;Parent=gene-O5D79_002726;Dbxref=NCBI_GP:HJH9164187.1;Name=HJH9164187.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248755.1;locus_tag=O5D79_002726;product=glucose uptake inhibitor SgrT;protein_id=HJH9164187.1;transl_table=11 DALFDJ020000013.1 tpg gene 56247 56852 . - . ID=gene-O5D79_002727;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=O5D79_002727 DALFDJ020000013.1 Protein Homology CDS 56247 56852 . - 0 ID=cds-HJH9164188.1;Parent=gene-O5D79_002727;Dbxref=NCBI_GP:HJH9164188.1;Name=HJH9164188.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=O5D79_002727;product=3-isopropylmalate dehydratase small subunit;protein_id=HJH9164188.1;transl_table=11 DALFDJ020000013.1 tpg gene 56863 58263 . - . ID=gene-O5D79_002728;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=O5D79_002728 DALFDJ020000013.1 Protein Homology CDS 56863 58263 . - 0 ID=cds-HJH9164189.1;Parent=gene-O5D79_002728;Dbxref=NCBI_GP:HJH9164189.1;Name=HJH9164189.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459116.1;locus_tag=O5D79_002728;product=3-isopropylmalate dehydratase large subunit;protein_id=HJH9164189.1;transl_table=11 DALFDJ020000013.1 tpg gene 58266 59357 . - . ID=gene-O5D79_002729;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=O5D79_002729 DALFDJ020000013.1 Protein Homology CDS 58266 59357 . - 0 ID=cds-HJH9164190.1;Parent=gene-O5D79_002729;Dbxref=NCBI_GP:HJH9164190.1;Name=HJH9164190.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=O5D79_002729;product=3-isopropylmalate dehydrogenase;protein_id=HJH9164190.1;transl_table=11 DALFDJ020000013.1 tpg gene 59357 60928 . - . ID=gene-O5D79_002730;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=O5D79_002730 DALFDJ020000013.1 Protein Homology CDS 59357 60928 . - 0 ID=cds-HJH9164191.1;Parent=gene-O5D79_002730;Dbxref=NCBI_GP:HJH9164191.1;Name=HJH9164191.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=O5D79_002730;product=2-isopropylmalate synthase;protein_id=HJH9164191.1;transl_table=11 DALFDJ020000013.1 tpg gene 61016 61102 . - . ID=gene-O5D79_002731;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=O5D79_002731 DALFDJ020000013.1 Protein Homology CDS 61016 61102 . - 0 ID=cds-HJH9164192.1;Parent=gene-O5D79_002731;Dbxref=NCBI_GP:HJH9164192.1;Name=HJH9164192.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459119.1;locus_tag=O5D79_002731;product=leu operon leader peptide;protein_id=HJH9164192.1;transl_table=11 DALFDJ020000013.1 tpg gene 61759 62703 . + . ID=gene-O5D79_002732;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=O5D79_002732 DALFDJ020000013.1 Protein Homology CDS 61759 62703 . + 0 ID=cds-HJH9164193.1;Parent=gene-O5D79_002732;Dbxref=NCBI_GP:HJH9164193.1;Name=HJH9164193.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459120.1;locus_tag=O5D79_002732;product=transcriptional regulator LeuO;protein_id=HJH9164193.1;transl_table=11 DALFDJ020000013.1 tpg gene 63025 64749 . + . ID=gene-O5D79_002733;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=O5D79_002733 DALFDJ020000013.1 Protein Homology CDS 63025 64749 . + 0 ID=cds-HJH9164194.1;Parent=gene-O5D79_002733;Dbxref=NCBI_GP:HJH9164194.1;Name=HJH9164194.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=O5D79_002733;product=acetolactate synthase 3 large subunit;protein_id=HJH9164194.1;transl_table=11 DALFDJ020000013.1 tpg gene 64752 65243 . + . ID=gene-O5D79_002734;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=O5D79_002734 DALFDJ020000013.1 Protein Homology CDS 64752 65243 . + 0 ID=cds-HJH9164195.1;Parent=gene-O5D79_002734;Dbxref=NCBI_GP:HJH9164195.1;Name=HJH9164195.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=O5D79_002734;product=acetolactate synthase small subunit;protein_id=HJH9164195.1;transl_table=11 DALFDJ020000013.1 tpg gene 65527 66531 . + . ID=gene-O5D79_002735;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=O5D79_002735 DALFDJ020000013.1 Protein Homology CDS 65527 66531 . + 0 ID=cds-HJH9164196.1;Parent=gene-O5D79_002735;Dbxref=NCBI_GP:HJH9164196.1;Name=HJH9164196.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459123.1;locus_tag=O5D79_002735;product=catabolite repressor/activator;protein_id=HJH9164196.1;transl_table=11 DALFDJ020000013.1 tpg gene 67138 67596 . + . ID=gene-O5D79_002736;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=O5D79_002736 DALFDJ020000013.1 Protein Homology CDS 67138 67596 . + 0 ID=cds-HJH9164197.1;Parent=gene-O5D79_002736;Dbxref=NCBI_GP:HJH9164197.1;Name=HJH9164197.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=O5D79_002736;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=HJH9164197.1;transl_table=11 DALFDJ020000013.1 tpg gene 67598 68539 . + . ID=gene-O5D79_002737;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=O5D79_002737 DALFDJ020000013.1 Protein Homology CDS 67598 68539 . + 0 ID=cds-HJH9164198.1;Parent=gene-O5D79_002737;Dbxref=NCBI_GP:HJH9164198.1;Name=HJH9164198.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=O5D79_002737;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=HJH9164198.1;transl_table=11 DALFDJ020000013.1 tpg gene 68536 68901 . + . ID=gene-O5D79_002738;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=O5D79_002738 DALFDJ020000013.1 Protein Homology CDS 68536 68901 . + 0 ID=cds-HJH9164199.1;Parent=gene-O5D79_002738;Dbxref=NCBI_GP:HJH9164199.1;Name=HJH9164199.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=O5D79_002738;product=cell division protein FtsL;protein_id=HJH9164199.1;transl_table=11 DALFDJ020000013.1 tpg gene 68917 70683 . + . ID=gene-O5D79_002739;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=O5D79_002739 DALFDJ020000013.1 Protein Homology CDS 68917 70683 . + 0 ID=cds-HJH9164200.1;Parent=gene-O5D79_002739;Dbxref=NCBI_GP:HJH9164200.1;Name=HJH9164200.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=O5D79_002739;product=peptidoglycan glycosyltransferase FtsI;protein_id=HJH9164200.1;transl_table=11 DALFDJ020000013.1 tpg gene 70670 72157 . + . ID=gene-O5D79_002740;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=O5D79_002740 DALFDJ020000013.1 Protein Homology CDS 70670 72157 . + 0 ID=cds-HJH9164201.1;Parent=gene-O5D79_002740;Dbxref=NCBI_GP:HJH9164201.1;Name=HJH9164201.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459128.1;locus_tag=O5D79_002740;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=HJH9164201.1;transl_table=11 DALFDJ020000013.1 tpg gene 72154 73512 . + . ID=gene-O5D79_002741;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=O5D79_002741 DALFDJ020000013.1 Protein Homology CDS 72154 73512 . + 0 ID=cds-HJH9164202.1;Parent=gene-O5D79_002741;Dbxref=NCBI_GP:HJH9164202.1;Name=HJH9164202.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459129.1;locus_tag=O5D79_002741;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=HJH9164202.1;transl_table=11 DALFDJ020000013.1 tpg gene 73506 74588 . + . ID=gene-O5D79_002742;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=O5D79_002742 DALFDJ020000013.1 Protein Homology CDS 73506 74588 . + 0 ID=cds-HJH9164203.1;Parent=gene-O5D79_002742;Dbxref=NCBI_GP:HJH9164203.1;Name=HJH9164203.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=O5D79_002742;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=HJH9164203.1;transl_table=11 DALFDJ020000013.1 tpg gene 74591 75907 . + . ID=gene-O5D79_002743;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=O5D79_002743 DALFDJ020000013.1 Protein Homology CDS 74591 75907 . + 0 ID=cds-HJH9164204.1;Parent=gene-O5D79_002743;Dbxref=NCBI_GP:HJH9164204.1;Name=HJH9164204.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=O5D79_002743;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=HJH9164204.1;transl_table=11 DALFDJ020000013.1 tpg gene 75907 77151 . + . ID=gene-O5D79_002744;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=O5D79_002744 DALFDJ020000013.1 Protein Homology CDS 75907 77151 . + 0 ID=cds-HJH9164205.1;Parent=gene-O5D79_002744;Dbxref=NCBI_GP:HJH9164205.1;Name=HJH9164205.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459132.1;locus_tag=O5D79_002744;product=cell division protein FtsW;protein_id=HJH9164205.1;transl_table=11 DALFDJ020000013.1 tpg gene 77148 78215 . + . ID=gene-O5D79_002745;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=O5D79_002745 DALFDJ020000013.1 Protein Homology CDS 77148 78215 . + 0 ID=cds-HJH9164206.1;Parent=gene-O5D79_002745;Dbxref=NCBI_GP:HJH9164206.1;Name=HJH9164206.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459133.1;locus_tag=O5D79_002745;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=HJH9164206.1;transl_table=11 DALFDJ020000013.1 tpg gene 78334 79809 . + . ID=gene-O5D79_002746;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=O5D79_002746 DALFDJ020000013.1 Protein Homology CDS 78334 79809 . + 0 ID=cds-HJH9164207.1;Parent=gene-O5D79_002746;Dbxref=NCBI_GP:HJH9164207.1;Name=HJH9164207.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=O5D79_002746;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=HJH9164207.1;transl_table=11 DALFDJ020000013.1 tpg gene 79802 80722 . + . ID=gene-O5D79_002747;Name=O5D79_002747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002747 DALFDJ020000013.1 Protein Homology CDS 79802 80722 . + 0 ID=cds-HJH9164208.1;Parent=gene-O5D79_002747;Dbxref=NCBI_GP:HJH9164208.1;Name=HJH9164208.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459135.1;locus_tag=O5D79_002747;product=D-alanine--D-alanine ligase;protein_id=HJH9164208.1;transl_table=11 DALFDJ020000013.1 tpg gene 80724 81554 . + . ID=gene-O5D79_002748;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=O5D79_002748 DALFDJ020000013.1 Protein Homology CDS 80724 81554 . + 0 ID=cds-HJH9164209.1;Parent=gene-O5D79_002748;Dbxref=NCBI_GP:HJH9164209.1;Name=HJH9164209.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459136.1;locus_tag=O5D79_002748;product=cell division protein FtsQ;protein_id=HJH9164209.1;transl_table=11 DALFDJ020000013.1 tpg gene 81551 82813 . + . ID=gene-O5D79_002749;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=O5D79_002749 DALFDJ020000013.1 Protein Homology CDS 81551 82813 . + 0 ID=cds-HJH9164210.1;Parent=gene-O5D79_002749;Dbxref=NCBI_GP:HJH9164210.1;Name=HJH9164210.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=O5D79_002749;product=cell division protein FtsA;protein_id=HJH9164210.1;transl_table=11 DALFDJ020000013.1 tpg gene 82874 84025 . + . ID=gene-O5D79_002750;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=O5D79_002750 DALFDJ020000013.1 Protein Homology CDS 82874 84025 . + 0 ID=cds-HJH9164211.1;Parent=gene-O5D79_002750;Dbxref=NCBI_GP:HJH9164211.1;Name=HJH9164211.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=O5D79_002750;product=cell division protein FtsZ;protein_id=HJH9164211.1;transl_table=11 DALFDJ020000013.1 tpg gene 84126 85043 . + . ID=gene-O5D79_002751;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=O5D79_002751 DALFDJ020000013.1 Protein Homology CDS 84126 85043 . + 0 ID=cds-HJH9164212.1;Parent=gene-O5D79_002751;Dbxref=NCBI_GP:HJH9164212.1;Name=HJH9164212.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459139.1;locus_tag=O5D79_002751;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=HJH9164212.1;transl_table=11 DALFDJ020000013.1 tpg gene 85322 85819 . + . ID=gene-O5D79_002752;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=O5D79_002752 DALFDJ020000013.1 Protein Homology CDS 85322 85819 . + 0 ID=cds-HJH9164213.1;Parent=gene-O5D79_002752;Dbxref=NCBI_GP:HJH9164213.1;Name=HJH9164213.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308128.2;locus_tag=O5D79_002752;product=secA translation cis-regulator SecM;protein_id=HJH9164213.1;transl_table=11 DALFDJ020000013.1 tpg gene 85881 88586 . + . ID=gene-O5D79_002753;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=O5D79_002753 DALFDJ020000013.1 Protein Homology CDS 85881 88586 . + 0 ID=cds-HJH9164214.1;Parent=gene-O5D79_002753;Dbxref=NCBI_GP:HJH9164214.1;Name=HJH9164214.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459141.1;locus_tag=O5D79_002753;product=preprotein translocase subunit SecA;protein_id=HJH9164214.1;transl_table=11 DALFDJ020000013.1 tpg gene 88742 89137 . + . ID=gene-O5D79_002754;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=O5D79_002754 DALFDJ020000013.1 Protein Homology CDS 88742 89137 . + 0 ID=cds-HJH9164215.1;Parent=gene-O5D79_002754;Dbxref=NCBI_GP:HJH9164215.1;Name=HJH9164215.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000736055.1;locus_tag=O5D79_002754;product=8-oxo-dGTP diphosphatase MutT;protein_id=HJH9164215.1;transl_table=11 DALFDJ020000013.1 tpg gene 89171 90160 . - . ID=gene-O5D79_002755;Name=O5D79_002755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002755 DALFDJ020000013.1 Protein Homology CDS 89171 90160 . - 0 ID=cds-HJH9164216.1;Parent=gene-O5D79_002755;Dbxref=NCBI_GP:HJH9164216.1;Name=HJH9164216.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200034.1;locus_tag=O5D79_002755;product=aldo/keto reductase;protein_id=HJH9164216.1;transl_table=11 DALFDJ020000013.1 tpg gene 90246 91187 . + . ID=gene-O5D79_002756;Name=O5D79_002756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002756 DALFDJ020000013.1 Protein Homology CDS 90246 91187 . + 0 ID=cds-HJH9164217.1;Parent=gene-O5D79_002756;Dbxref=NCBI_GP:HJH9164217.1;Name=HJH9164217.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001622534.1;locus_tag=O5D79_002756;product=LysR family transcriptional regulator;protein_id=HJH9164217.1;transl_table=11 DALFDJ020000013.1 tpg gene 91184 91375 . - . ID=gene-O5D79_002757;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=O5D79_002757 DALFDJ020000013.1 Protein Homology CDS 91184 91375 . - 0 ID=cds-HJH9164218.1;Parent=gene-O5D79_002757;Dbxref=NCBI_GP:HJH9164218.1;Name=HJH9164218.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459143.1;locus_tag=O5D79_002757;product=DNA gyrase inhibitor YacG;protein_id=HJH9164218.1;transl_table=11 DALFDJ020000013.1 tpg gene 91385 92128 . - . ID=gene-O5D79_002758;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=O5D79_002758 DALFDJ020000013.1 Protein Homology CDS 91385 92128 . - 0 ID=cds-HJH9164219.1;Parent=gene-O5D79_002758;Dbxref=NCBI_GP:HJH9164219.1;Name=HJH9164219.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459144.1;locus_tag=O5D79_002758;product=cell division protein ZapD;protein_id=HJH9164219.1;transl_table=11 DALFDJ020000013.1 tpg gene 92128 92748 . - . ID=gene-O5D79_002759;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=O5D79_002759 DALFDJ020000013.1 Protein Homology CDS 92128 92748 . - 0 ID=cds-HJH9164220.1;Parent=gene-O5D79_002759;Dbxref=NCBI_GP:HJH9164220.1;Name=HJH9164220.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459145.1;locus_tag=O5D79_002759;product=dephospho-CoA kinase;protein_id=HJH9164220.1;transl_table=11 DALFDJ020000013.1 tpg gene 92974 94017 . + . ID=gene-O5D79_002760;Name=O5D79_002760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002760 DALFDJ020000013.1 Protein Homology CDS 92974 94017 . + 0 ID=cds-HJH9164221.1;Parent=gene-O5D79_002760;Dbxref=NCBI_GP:HJH9164221.1;Name=HJH9164221.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=O5D79_002760;product=GMP reductase;protein_id=HJH9164221.1;transl_table=11 DALFDJ020000013.1 tpg gene 94048 95250 . - . ID=gene-O5D79_002761;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=O5D79_002761 DALFDJ020000013.1 Protein Homology CDS 94048 95250 . - 0 ID=cds-HJH9164222.1;Parent=gene-O5D79_002761;Dbxref=NCBI_GP:HJH9164222.1;Name=HJH9164222.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459147.1;locus_tag=O5D79_002761;product=protein transport protein HofC;protein_id=HJH9164222.1;transl_table=11 DALFDJ020000013.1 tpg gene 95240 96625 . - . ID=gene-O5D79_002762;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=O5D79_002762 DALFDJ020000013.1 Protein Homology CDS 95240 96625 . - 0 ID=cds-HJH9164223.1;Parent=gene-O5D79_002762;Dbxref=NCBI_GP:HJH9164223.1;Name=HJH9164223.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459148.1;locus_tag=O5D79_002762;product=type II secretion system protein GspE;protein_id=HJH9164223.1;transl_table=11 DALFDJ020000013.1 tpg gene 96635 97072 . - . ID=gene-O5D79_002763;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=O5D79_002763 DALFDJ020000013.1 Protein Homology CDS 96635 97072 . - 0 ID=cds-HJH9164224.1;Parent=gene-O5D79_002763;Dbxref=NCBI_GP:HJH9164224.1;Name=HJH9164224.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459149.1;locus_tag=O5D79_002763;product=prepilin peptidase-dependent pilin;protein_id=HJH9164224.1;transl_table=11 DALFDJ020000013.1 tpg gene 97294 98187 . - . ID=gene-O5D79_002764;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=O5D79_002764 DALFDJ020000013.1 Protein Homology CDS 97294 98187 . - 0 ID=cds-HJH9164225.1;Parent=gene-O5D79_002764;Dbxref=NCBI_GP:HJH9164225.1;Name=HJH9164225.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308140.1;locus_tag=O5D79_002764;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=HJH9164225.1;transl_table=11 DALFDJ020000013.1 tpg gene 98275 98838 . + . ID=gene-O5D79_002765;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=O5D79_002765 DALFDJ020000013.1 Protein Homology CDS 98275 98838 . + 0 ID=cds-HJH9164226.1;Parent=gene-O5D79_002765;Dbxref=NCBI_GP:HJH9164226.1;Name=HJH9164226.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459151.1;locus_tag=O5D79_002765;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=HJH9164226.1;transl_table=11 DALFDJ020000013.1 tpg gene 98835 99689 . + . ID=gene-O5D79_002766;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=O5D79_002766 DALFDJ020000013.1 Protein Homology CDS 98835 99689 . + 0 ID=cds-HJH9164227.1;Parent=gene-O5D79_002766;Dbxref=NCBI_GP:HJH9164227.1;Name=HJH9164227.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=O5D79_002766;product=beta-lactamase regulator AmpE;protein_id=HJH9164227.1;transl_table=11 DALFDJ020000013.1 tpg gene 99781 100731 . - . ID=gene-O5D79_002767;Name=O5D79_002767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002767 DALFDJ020000013.1 Protein Homology CDS 99781 100731 . - 0 ID=cds-HJH9164228.1;Parent=gene-O5D79_002767;Dbxref=NCBI_GP:HJH9164228.1;Name=HJH9164228.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459153.1;locus_tag=O5D79_002767;product=glycoside hydrolase family 43 protein;protein_id=HJH9164228.1;transl_table=11 DALFDJ020000013.1 tpg gene 100731 102137 . - . ID=gene-O5D79_002768;Name=O5D79_002768;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002768 DALFDJ020000013.1 Protein Homology CDS 100731 102137 . - 0 ID=cds-HJH9164229.1;Parent=gene-O5D79_002768;Dbxref=NCBI_GP:HJH9164229.1;Name=HJH9164229.1;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=monoatomic cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459154.1;locus_tag=O5D79_002768;product=glycoside-pentoside-hexuronide (GPH):cation symporter;protein_id=HJH9164229.1;transl_table=11 DALFDJ020000013.1 tpg gene 102301 103674 . - . ID=gene-O5D79_002769;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=O5D79_002769 DALFDJ020000013.1 Protein Homology CDS 102301 103674 . - 0 ID=cds-HJH9164230.1;Parent=gene-O5D79_002769;Dbxref=NCBI_GP:HJH9164230.1;Name=HJH9164230.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459155.1;locus_tag=O5D79_002769;product=aromatic amino acid transporter AroP;protein_id=HJH9164230.1;transl_table=11 DALFDJ020000013.1 tpg gene 104237 105001 . + . ID=gene-O5D79_002770;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=O5D79_002770 DALFDJ020000013.1 Protein Homology CDS 104237 105001 . + 0 ID=cds-HJH9164231.1;Parent=gene-O5D79_002770;Dbxref=NCBI_GP:HJH9164231.1;Name=HJH9164231.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459156.1;locus_tag=O5D79_002770;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=HJH9164231.1;transl_table=11 DALFDJ020000013.1 tpg gene 105308 107971 . + . ID=gene-O5D79_002771;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=O5D79_002771 DALFDJ020000013.1 Protein Homology CDS 105308 107971 . + 0 ID=cds-HJH9164232.1;Parent=gene-O5D79_002771;Dbxref=NCBI_GP:HJH9164232.1;Name=HJH9164232.1;Ontology_term=GO:0006086,GO:0004738,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=O5D79_002771;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=HJH9164232.1;transl_table=11 DALFDJ020000013.1 tpg gene 107986 109875 . + . ID=gene-O5D79_002772;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=O5D79_002772 DALFDJ020000013.1 Protein Homology CDS 107986 109875 . + 0 ID=cds-HJH9164233.1;Parent=gene-O5D79_002772;Dbxref=NCBI_GP:HJH9164233.1;Name=HJH9164233.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459158.2;locus_tag=O5D79_002772;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=HJH9164233.1;transl_table=11 DALFDJ020000013.1 tpg gene 110076 111500 . + . ID=gene-O5D79_002773;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=O5D79_002773 DALFDJ020000013.1 Protein Homology CDS 110076 111500 . + 0 ID=cds-HJH9164234.1;Parent=gene-O5D79_002773;Dbxref=NCBI_GP:HJH9164234.1;Name=HJH9164234.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=O5D79_002773;product=dihydrolipoyl dehydrogenase;protein_id=HJH9164234.1;transl_table=11 DALFDJ020000013.1 tpg gene 111789 112073 . + . ID=gene-O5D79_002774;Name=O5D79_002774;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002774 DALFDJ020000013.1 Protein Homology CDS 111789 112073 . + 0 ID=cds-HJH9164235.1;Parent=gene-O5D79_002774;Dbxref=NCBI_GP:HJH9164235.1;Name=HJH9164235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459160.1;locus_tag=O5D79_002774;product=hypothetical protein;protein_id=HJH9164235.1;transl_table=11 DALFDJ020000013.1 tpg gene 112111 112902 . - . ID=gene-O5D79_002775;Name=O5D79_002775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002775 DALFDJ020000013.1 Protein Homology CDS 112111 112902 . - 0 ID=cds-HJH9164236.1;Parent=gene-O5D79_002775;Dbxref=NCBI_GP:HJH9164236.1;Name=HJH9164236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459161.1;locus_tag=O5D79_002775;product=DUF2950 family protein;protein_id=HJH9164236.1;transl_table=11 DALFDJ020000013.1 tpg gene 112915 114543 . - . ID=gene-O5D79_002776;Name=O5D79_002776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002776 DALFDJ020000013.1 Protein Homology CDS 112915 114543 . - 0 ID=cds-HJH9164237.1;Parent=gene-O5D79_002776;Dbxref=NCBI_GP:HJH9164237.1;Name=HJH9164237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459162.2;locus_tag=O5D79_002776;product=DUF3300 domain-containing protein;protein_id=HJH9164237.1;transl_table=11 DALFDJ020000013.1 tpg gene 114932 117529 . + . ID=gene-O5D79_002777;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=O5D79_002777 DALFDJ020000013.1 Protein Homology CDS 114932 117529 . + 0 ID=cds-HJH9164238.1;Parent=gene-O5D79_002777;Dbxref=NCBI_GP:HJH9164238.1;Name=HJH9164238.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=O5D79_002777;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=HJH9164238.1;transl_table=11 DALFDJ020000013.1 tpg gene 117569 118033 . - . ID=gene-O5D79_002778;Name=O5D79_002778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002778 DALFDJ020000013.1 Protein Homology CDS 117569 118033 . - 0 ID=cds-HJH9164239.1;Parent=gene-O5D79_002778;Dbxref=NCBI_GP:HJH9164239.1;Name=HJH9164239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110434.1;locus_tag=O5D79_002778;product=hypothetical protein;protein_id=HJH9164239.1;transl_table=11 DALFDJ020000013.1 tpg gene 118443 118766 . - . ID=gene-O5D79_002779;Name=O5D79_002779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002779 DALFDJ020000013.1 Protein Homology CDS 118443 118766 . - 0 ID=cds-HJH9164240.1;Parent=gene-O5D79_002779;Dbxref=NCBI_GP:HJH9164240.1;Name=HJH9164240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101536.1;locus_tag=O5D79_002779;product=low molecular weight protein tyrosine phosphatase family protein;protein_id=HJH9164240.1;transl_table=11 DALFDJ020000013.1 tpg gene 119037 119399 . + . ID=gene-O5D79_002780;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=O5D79_002780 DALFDJ020000013.1 Protein Homology CDS 119037 119399 . + 0 ID=cds-HJH9164241.1;Parent=gene-O5D79_002780;Dbxref=NCBI_GP:HJH9164241.1;Name=HJH9164241.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459165.1;locus_tag=O5D79_002780;product=protein YacL;protein_id=HJH9164241.1;transl_table=11 DALFDJ020000013.1 tpg gene 119634 120587 . + . ID=gene-O5D79_002781;Name=O5D79_002781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002781 DALFDJ020000013.1 Protein Homology CDS 119634 120587 . + 0 ID=cds-HJH9164242.1;Parent=gene-O5D79_002781;Dbxref=NCBI_GP:HJH9164242.1;Name=HJH9164242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459166.1;locus_tag=O5D79_002781;product=2-keto-3-deoxygluconate permease 1;protein_id=HJH9164242.1;transl_table=11 DALFDJ020000013.1 tpg gene 120584 121855 . + . ID=gene-O5D79_002782;Name=dtnK;gbkey=Gene;gene=dtnK;gene_biotype=protein_coding;locus_tag=O5D79_002782 DALFDJ020000013.1 Protein Homology CDS 120584 121855 . + 0 ID=cds-HJH9164243.1;Parent=gene-O5D79_002782;Dbxref=NCBI_GP:HJH9164243.1;Name=HJH9164243.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;gene=dtnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459167.1;locus_tag=O5D79_002782;product=D-threonate kinase;protein_id=HJH9164243.1;transl_table=11 DALFDJ020000013.1 tpg gene 121845 122828 . + . ID=gene-O5D79_002783;Name=O5D79_002783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002783 DALFDJ020000013.1 Protein Homology CDS 121845 122828 . + 0 ID=cds-HJH9164244.1;Parent=gene-O5D79_002783;Dbxref=NCBI_GP:HJH9164244.1;Name=HJH9164244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459168.1;locus_tag=O5D79_002783;product=D-threonate 4-phosphate dehydrogenase;protein_id=HJH9164244.1;transl_table=11 DALFDJ020000013.1 tpg gene 122838 123605 . + . ID=gene-O5D79_002784;Name=O5D79_002784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002784 DALFDJ020000013.1 Protein Homology CDS 122838 123605 . + 0 ID=cds-HJH9164245.1;Parent=gene-O5D79_002784;Dbxref=NCBI_GP:HJH9164245.1;Name=HJH9164245.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459169.1;locus_tag=O5D79_002784;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=HJH9164245.1;transl_table=11 DALFDJ020000013.1 tpg gene 123635 124429 . - . ID=gene-O5D79_002785;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=O5D79_002785 DALFDJ020000013.1 Protein Homology CDS 123635 124429 . - 0 ID=cds-HJH9164246.1;Parent=gene-O5D79_002785;Dbxref=NCBI_GP:HJH9164246.1;Name=HJH9164246.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459170.1;locus_tag=O5D79_002785;product=adenosylmethionine decarboxylase;protein_id=HJH9164246.1;transl_table=11 DALFDJ020000013.1 tpg gene 124450 125310 . - . ID=gene-O5D79_002786;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=O5D79_002786 DALFDJ020000013.1 Protein Homology CDS 124450 125310 . - 0 ID=cds-HJH9164247.1;Parent=gene-O5D79_002786;Dbxref=NCBI_GP:HJH9164247.1;Name=HJH9164247.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459171.1;locus_tag=O5D79_002786;product=polyamine aminopropyltransferase;protein_id=HJH9164247.1;transl_table=11 DALFDJ020000013.1 tpg gene 125417 125764 . - . ID=gene-O5D79_002787;Name=O5D79_002787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002787 DALFDJ020000013.1 Protein Homology CDS 125417 125764 . - 0 ID=cds-HJH9164248.1;Parent=gene-O5D79_002787;Dbxref=NCBI_GP:HJH9164248.1;Name=HJH9164248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459172.1;locus_tag=O5D79_002787;product=YacC family pilotin-like protein;protein_id=HJH9164248.1;transl_table=11 DALFDJ020000013.1 tpg gene 125966 127576 . + . ID=gene-O5D79_002788;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=O5D79_002788 DALFDJ020000013.1 Protein Homology CDS 125966 127576 . + 0 ID=cds-HJH9164249.1;Parent=gene-O5D79_002788;Dbxref=NCBI_GP:HJH9164249.1;Name=HJH9164249.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459173.1;locus_tag=O5D79_002788;product=multicopper oxidase CueO;protein_id=HJH9164249.1;transl_table=11 DALFDJ020000013.1 tpg gene 127654 130044 . - . ID=gene-O5D79_002789;Name=O5D79_002789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002789 DALFDJ020000013.1 Protein Homology CDS 127654 130044 . - 0 ID=cds-HJH9164250.1;Parent=gene-O5D79_002789;Dbxref=NCBI_GP:HJH9164250.1;Name=HJH9164250.1;Ontology_term=GO:0016614,GO:0048038,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459174.1;locus_tag=O5D79_002789;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;protein_id=HJH9164250.1;transl_table=11 DALFDJ020000013.1 tpg gene 130250 130786 . + . ID=gene-O5D79_002790;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=O5D79_002790 DALFDJ020000013.1 Protein Homology CDS 130250 130786 . + 0 ID=cds-HJH9164251.1;Parent=gene-O5D79_002790;Dbxref=NCBI_GP:HJH9164251.1;Name=HJH9164251.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=O5D79_002790;product=hypoxanthine phosphoribosyltransferase;protein_id=HJH9164251.1;transl_table=11 DALFDJ020000013.1 tpg gene 130844 131506 . - . ID=gene-O5D79_002791;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=O5D79_002791 DALFDJ020000013.1 Protein Homology CDS 130844 131506 . - 0 ID=cds-HJH9164252.1;Parent=gene-O5D79_002791;Dbxref=NCBI_GP:HJH9164252.1;Name=HJH9164252.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459176.1;locus_tag=O5D79_002791;product=carbonate dehydratase;protein_id=HJH9164252.1;transl_table=11 DALFDJ020000013.1 tpg gene 131615 132541 . + . ID=gene-O5D79_002792;Name=O5D79_002792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002792 DALFDJ020000013.1 Protein Homology CDS 131615 132541 . + 0 ID=cds-HJH9164253.1;Parent=gene-O5D79_002792;Dbxref=NCBI_GP:HJH9164253.1;Name=HJH9164253.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459177.1;locus_tag=O5D79_002792;product=ABC transporter ATP-binding protein;protein_id=HJH9164253.1;transl_table=11 DALFDJ020000013.1 tpg gene 132538 133308 . + . ID=gene-O5D79_002793;Name=O5D79_002793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002793 DALFDJ020000013.1 Protein Homology CDS 132538 133308 . + 0 ID=cds-HJH9164254.1;Parent=gene-O5D79_002793;Dbxref=NCBI_GP:HJH9164254.1;Name=HJH9164254.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=O5D79_002793;product=ABC transporter permease;protein_id=HJH9164254.1;transl_table=11 DALFDJ020000013.1 tpg gene 133413 133853 . + . ID=gene-O5D79_002794;Name=O5D79_002794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002794 DALFDJ020000013.1 Protein Homology CDS 133413 133853 . + 0 ID=cds-HJH9164255.1;Parent=gene-O5D79_002794;Dbxref=NCBI_GP:HJH9164255.1;Name=HJH9164255.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459183.1;locus_tag=O5D79_002794;product=PTS sugar transporter subunit IIA;protein_id=HJH9164255.1;transl_table=11 DALFDJ020000013.1 tpg pseudogene 133915 135144 . + . ID=gene-O5D79_002795;Name=O5D79_002795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_002795;pseudo=true DALFDJ020000013.1 Protein Homology CDS 133915 135144 . + 0 ID=cds-O5D79_002795;Parent=gene-O5D79_002795;Note=internal stop;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459184.1;locus_tag=O5D79_002795;product=polysaccharide deacetylase family protein;pseudo=true;transl_table=11 DALFDJ020000013.1 tpg gene 135151 135531 . - . ID=gene-O5D79_002796;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=O5D79_002796 DALFDJ020000013.1 Protein Homology CDS 135151 135531 . - 0 ID=cds-HJH9164256.1;Parent=gene-O5D79_002796;Dbxref=NCBI_GP:HJH9164256.1;Name=HJH9164256.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=O5D79_002796;product=aspartate 1-decarboxylase;protein_id=HJH9164256.1;transl_table=11 DALFDJ020000013.1 tpg gene 135626 136480 . - . ID=gene-O5D79_002797;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=O5D79_002797 DALFDJ020000013.1 Protein Homology CDS 135626 136480 . - 0 ID=cds-HJH9164257.1;Parent=gene-O5D79_002797;Dbxref=NCBI_GP:HJH9164257.1;Name=HJH9164257.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459186.1;locus_tag=O5D79_002797;product=pantoate--beta-alanine ligase;protein_id=HJH9164257.1;transl_table=11 DALFDJ020000013.1 tpg gene 136606 137397 . - . ID=gene-O5D79_002798;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=O5D79_002798 DALFDJ020000013.1 Protein Homology CDS 136606 137397 . - 0 ID=cds-HJH9164258.1;Parent=gene-O5D79_002798;Dbxref=NCBI_GP:HJH9164258.1;Name=HJH9164258.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=O5D79_002798;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=HJH9164258.1;transl_table=11 DALFDJ020000013.1 tpg gene 137518 137997 . - . ID=gene-O5D79_002799;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=O5D79_002799 DALFDJ020000013.1 Protein Homology CDS 137518 137997 . - 0 ID=cds-HJH9164259.1;Parent=gene-O5D79_002799;Dbxref=NCBI_GP:HJH9164259.1;Name=HJH9164259.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459188.1;locus_tag=O5D79_002799;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=HJH9164259.1;transl_table=11 DALFDJ020000013.1 tpg gene 137994 139391 . - . ID=gene-O5D79_002800;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=O5D79_002800 DALFDJ020000013.1 Protein Homology CDS 137994 139391 . - 0 ID=cds-HJH9164260.1;Parent=gene-O5D79_002800;Dbxref=NCBI_GP:HJH9164260.1;Name=HJH9164260.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=O5D79_002800;product=polynucleotide adenylyltransferase PcnB;protein_id=HJH9164260.1;transl_table=11 DALFDJ020000013.1 tpg gene 139553 140449 . - . ID=gene-O5D79_002801;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=O5D79_002801 DALFDJ020000013.1 Protein Homology CDS 139553 140449 . - 0 ID=cds-HJH9164261.1;Parent=gene-O5D79_002801;Dbxref=NCBI_GP:HJH9164261.1;Name=HJH9164261.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549989.1;locus_tag=O5D79_002801;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=HJH9164261.1;transl_table=11 DALFDJ020000013.1 tpg gene 140518 140973 . - . ID=gene-O5D79_002802;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=O5D79_002802 DALFDJ020000013.1 Protein Homology CDS 140518 140973 . - 0 ID=cds-HJH9164262.1;Parent=gene-O5D79_002802;Dbxref=NCBI_GP:HJH9164262.1;Name=HJH9164262.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=O5D79_002802;product=RNA polymerase-binding protein DksA;protein_id=HJH9164262.1;transl_table=11 DALFDJ020000013.1 tpg gene 141150 141854 . - . ID=gene-O5D79_002803;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=O5D79_002803 DALFDJ020000013.1 Protein Homology CDS 141150 141854 . - 0 ID=cds-HJH9164263.1;Parent=gene-O5D79_002803;Dbxref=NCBI_GP:HJH9164263.1;Name=HJH9164263.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=O5D79_002803;product=DNA/RNA nuclease SfsA;protein_id=HJH9164263.1;transl_table=11 DALFDJ020000013.1 tpg gene 141871 142401 . - . ID=gene-O5D79_002804;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=O5D79_002804 DALFDJ020000013.1 Protein Homology CDS 141871 142401 . - 0 ID=cds-HJH9164264.1;Parent=gene-O5D79_002804;Dbxref=NCBI_GP:HJH9164264.1;Name=HJH9164264.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459193.1;locus_tag=O5D79_002804;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=HJH9164264.1;transl_table=11 DALFDJ020000013.1 tpg gene 142474 144903 . + . ID=gene-O5D79_002805;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=O5D79_002805 DALFDJ020000013.1 Protein Homology CDS 142474 144903 . + 0 ID=cds-HJH9164265.1;Parent=gene-O5D79_002805;Dbxref=NCBI_GP:HJH9164265.1;Name=HJH9164265.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414690.4;locus_tag=O5D79_002805;product=ATP-dependent helicase HrpB;protein_id=HJH9164265.1;transl_table=11 DALFDJ020000013.1 tpg gene 145044 147566 . + . ID=gene-O5D79_002806;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=O5D79_002806 DALFDJ020000013.1 Protein Homology CDS 145044 147566 . + 0 ID=cds-HJH9164266.1;Parent=gene-O5D79_002806;Dbxref=NCBI_GP:HJH9164266.1;Name=HJH9164266.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459195.1;locus_tag=O5D79_002806;product=bifunctional glycosyl transferase/transpeptidase;protein_id=HJH9164266.1;transl_table=11 DALFDJ020000013.1 tpg gene 147859 150048 . + . ID=gene-O5D79_002807;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=O5D79_002807 DALFDJ020000013.1 Protein Homology CDS 147859 150048 . + 0 ID=cds-HJH9164267.1;Parent=gene-O5D79_002807;Dbxref=NCBI_GP:HJH9164267.1;Name=HJH9164267.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459196.1;locus_tag=O5D79_002807;product=ferrichrome porin FhuA;protein_id=HJH9164267.1;transl_table=11 DALFDJ020000013.1 tpg gene 150097 150894 . + . ID=gene-O5D79_002808;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=O5D79_002808 DALFDJ020000013.1 Protein Homology CDS 150097 150894 . + 0 ID=cds-HJH9164268.1;Parent=gene-O5D79_002808;Dbxref=NCBI_GP:HJH9164268.1;Name=HJH9164268.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459197.1;locus_tag=O5D79_002808;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=HJH9164268.1;transl_table=11 DALFDJ020000013.1 tpg gene 150894 151784 . + . ID=gene-O5D79_002809;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=O5D79_002809 DALFDJ020000013.1 Protein Homology CDS 150894 151784 . + 0 ID=cds-HJH9164269.1;Parent=gene-O5D79_002809;Dbxref=NCBI_GP:HJH9164269.1;Name=HJH9164269.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459198.1;locus_tag=O5D79_002809;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=HJH9164269.1;transl_table=11 DALFDJ020000013.1 tpg gene 151799 153838 . + . ID=gene-O5D79_002810;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=O5D79_002810 DALFDJ020000013.1 Protein Homology CDS 151799 153838 . + 0 ID=cds-HJH9164270.1;Parent=gene-O5D79_002810;Dbxref=NCBI_GP:HJH9164270.1;Name=HJH9164270.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504759.1;locus_tag=O5D79_002810;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=HJH9164270.1;transl_table=11 DALFDJ020000013.1 tpg gene 153874 154173 . + . ID=gene-O5D79_002811;Name=O5D79_002811;end_range=154173,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002811;partial=true DALFDJ020000013.1 GeneMarkS-2+ CDS 153874 154173 . + 0 ID=cds-HJH9164271.1;Parent=gene-O5D79_002811;Dbxref=NCBI_GP:HJH9164271.1;Name=HJH9164271.1;end_range=154173,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_002811;partial=true;product=hypothetical protein;protein_id=HJH9164271.1;transl_table=11 ##sequence-region DALFDJ020000014.1 1 142039 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000014.1 tpg region 1 142039 . + . ID=DALFDJ020000014.1:1..142039;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000014.1 tpg gene 86 601 . - . ID=gene-O5D79_002812;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=O5D79_002812 DALFDJ020000014.1 Protein Homology CDS 86 601 . - 0 ID=cds-HJH9164272.1;Parent=gene-O5D79_002812;Dbxref=NCBI_GP:HJH9164272.1;Name=HJH9164272.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462873.1;locus_tag=O5D79_002812;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=HJH9164272.1;transl_table=11 DALFDJ020000014.1 tpg gene 598 1182 . - . ID=gene-O5D79_002813;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=O5D79_002813 DALFDJ020000014.1 Protein Homology CDS 598 1182 . - 0 ID=cds-HJH9164273.1;Parent=gene-O5D79_002813;Dbxref=NCBI_GP:HJH9164273.1;Name=HJH9164273.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462874.1;locus_tag=O5D79_002813;product=molybdenum cofactor guanylyltransferase MobA;protein_id=HJH9164273.1;transl_table=11 DALFDJ020000014.1 tpg gene 1252 1521 . + . ID=gene-O5D79_002814;Name=O5D79_002814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002814 DALFDJ020000014.1 Protein Homology CDS 1252 1521 . + 0 ID=cds-HJH9164274.1;Parent=gene-O5D79_002814;Dbxref=NCBI_GP:HJH9164274.1;Name=HJH9164274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=O5D79_002814;product=YihD family protein;protein_id=HJH9164274.1;transl_table=11 DALFDJ020000014.1 tpg gene 1598 2584 . + . ID=gene-O5D79_002815;Name=O5D79_002815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002815 DALFDJ020000014.1 Protein Homology CDS 1598 2584 . + 0 ID=cds-HJH9164275.1;Parent=gene-O5D79_002815;Dbxref=NCBI_GP:HJH9164275.1;Name=HJH9164275.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462876.1;locus_tag=O5D79_002815;product=serine/threonine protein kinase;protein_id=HJH9164275.1;transl_table=11 DALFDJ020000014.1 tpg gene 2601 3224 . + . ID=gene-O5D79_002816;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=O5D79_002816 DALFDJ020000014.1 Protein Homology CDS 2601 3224 . + 0 ID=cds-HJH9164276.1;Parent=gene-O5D79_002816;Dbxref=NCBI_GP:HJH9164276.1;Name=HJH9164276.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462877.1;locus_tag=O5D79_002816;product=thiol:disulfide interchange protein DsbA;protein_id=HJH9164276.1;transl_table=11 DALFDJ020000014.1 tpg gene 3237 4145 . - . ID=gene-O5D79_002817;Name=O5D79_002817;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002817 DALFDJ020000014.1 Protein Homology CDS 3237 4145 . - 0 ID=cds-HJH9164277.1;Parent=gene-O5D79_002817;Dbxref=NCBI_GP:HJH9164277.1;Name=HJH9164277.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462878.1;locus_tag=O5D79_002817;product=acyltransferase;protein_id=HJH9164277.1;transl_table=11 DALFDJ020000014.1 tpg gene 4533 7319 . + . ID=gene-O5D79_002818;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=O5D79_002818 DALFDJ020000014.1 Protein Homology CDS 4533 7319 . + 0 ID=cds-HJH9164278.1;Parent=gene-O5D79_002818;Dbxref=NCBI_GP:HJH9164278.1;Name=HJH9164278.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462879.1;locus_tag=O5D79_002818;product=DNA polymerase I;protein_id=HJH9164278.1;transl_table=11 DALFDJ020000014.1 tpg gene 7654 8286 . - . ID=gene-O5D79_002819;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=O5D79_002819 DALFDJ020000014.1 Protein Homology CDS 7654 8286 . - 0 ID=cds-HJH9164279.1;Parent=gene-O5D79_002819;Dbxref=NCBI_GP:HJH9164279.1;Name=HJH9164279.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462881.1;locus_tag=O5D79_002819;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=HJH9164279.1;transl_table=11 DALFDJ020000014.1 tpg gene 8526 8750 . + . ID=gene-O5D79_002820;Name=O5D79_002820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002820 DALFDJ020000014.1 Protein Homology CDS 8526 8750 . + 0 ID=cds-HJH9164280.1;Parent=gene-O5D79_002820;Dbxref=NCBI_GP:HJH9164280.1;Name=HJH9164280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462882.1;locus_tag=O5D79_002820;product=hypothetical protein;protein_id=HJH9164280.1;transl_table=11 DALFDJ020000014.1 tpg gene 8869 9384 . + . ID=gene-O5D79_002821;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=O5D79_002821 DALFDJ020000014.1 Protein Homology CDS 8869 9384 . + 0 ID=cds-HJH9164281.1;Parent=gene-O5D79_002821;Dbxref=NCBI_GP:HJH9164281.1;Name=HJH9164281.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462883.1;locus_tag=O5D79_002821;product=Der GTPase-activating protein YihI;protein_id=HJH9164281.1;transl_table=11 DALFDJ020000014.1 tpg gene 9573 10946 . + . ID=gene-O5D79_002822;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=O5D79_002822 DALFDJ020000014.1 Protein Homology CDS 9573 10946 . + 0 ID=cds-HJH9164282.1;Parent=gene-O5D79_002822;Dbxref=NCBI_GP:HJH9164282.1;Name=HJH9164282.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462884.1;locus_tag=O5D79_002822;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=HJH9164282.1;transl_table=11 DALFDJ020000014.1 tpg gene 11036 11146 . - . ID=gene-O5D79_002823;Name=O5D79_002823;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002823 DALFDJ020000014.1 Protein Homology CDS 11036 11146 . - 0 ID=cds-HJH9164283.1;Parent=gene-O5D79_002823;Dbxref=NCBI_GP:HJH9164283.1;Name=HJH9164283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=O5D79_002823;product=YshB family small membrane protein;protein_id=HJH9164283.1;transl_table=11 DALFDJ020000014.1 tpg gene 11259 12668 . - . ID=gene-O5D79_002824;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=O5D79_002824 DALFDJ020000014.1 Protein Homology CDS 11259 12668 . - 0 ID=cds-HJH9164284.1;Parent=gene-O5D79_002824;Dbxref=NCBI_GP:HJH9164284.1;Name=HJH9164284.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=O5D79_002824;product=nitrogen regulation protein NR(I);protein_id=HJH9164284.1;transl_table=11 DALFDJ020000014.1 tpg gene 12677 13726 . - . ID=gene-O5D79_002825;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=O5D79_002825 DALFDJ020000014.1 Protein Homology CDS 12677 13726 . - 0 ID=cds-HJH9164285.1;Parent=gene-O5D79_002825;Dbxref=NCBI_GP:HJH9164285.1;Name=HJH9164285.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462886.1;locus_tag=O5D79_002825;product=nitrogen regulation protein NR(II);protein_id=HJH9164285.1;transl_table=11 DALFDJ020000014.1 tpg gene 14001 15410 . - . ID=gene-O5D79_002826;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=O5D79_002826 DALFDJ020000014.1 Protein Homology CDS 14001 15410 . - 0 ID=cds-HJH9164286.1;Parent=gene-O5D79_002826;Dbxref=NCBI_GP:HJH9164286.1;Name=HJH9164286.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=O5D79_002826;product=glutamate--ammonia ligase;protein_id=HJH9164286.1;transl_table=11 DALFDJ020000014.1 tpg gene 15786 17609 . + . ID=gene-O5D79_002827;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=O5D79_002827 DALFDJ020000014.1 Protein Homology CDS 15786 17609 . + 0 ID=cds-HJH9164287.1;Parent=gene-O5D79_002827;Dbxref=NCBI_GP:HJH9164287.1;Name=HJH9164287.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462889.1;locus_tag=O5D79_002827;product=ribosome-dependent GTPase TypA;protein_id=HJH9164287.1;transl_table=11 DALFDJ020000014.1 tpg gene 17664 18398 . - . ID=gene-O5D79_002828;Name=O5D79_002828;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002828 DALFDJ020000014.1 Protein Homology CDS 17664 18398 . - 0 ID=cds-HJH9164288.1;Parent=gene-O5D79_002828;Dbxref=NCBI_GP:HJH9164288.1;Name=HJH9164288.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462890.1;locus_tag=O5D79_002828;product=Cof-type HAD-IIB family hydrolase;protein_id=HJH9164288.1;transl_table=11 DALFDJ020000014.1 tpg gene 18383 19261 . - . ID=gene-O5D79_002829;Name=O5D79_002829;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002829 DALFDJ020000014.1 Protein Homology CDS 18383 19261 . - 0 ID=cds-HJH9164289.1;Parent=gene-O5D79_002829;Dbxref=NCBI_GP:HJH9164289.1;Name=HJH9164289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462891.1;locus_tag=O5D79_002829;product=STM4011 family radical SAM protein;protein_id=HJH9164289.1;transl_table=11 DALFDJ020000014.1 tpg gene 19258 20499 . - . ID=gene-O5D79_002830;Name=O5D79_002830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002830 DALFDJ020000014.1 Protein Homology CDS 19258 20499 . - 0 ID=cds-HJH9164290.1;Parent=gene-O5D79_002830;Dbxref=NCBI_GP:HJH9164290.1;Name=HJH9164290.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462892.1;locus_tag=O5D79_002830;product=STM4012 family radical SAM protein;protein_id=HJH9164290.1;transl_table=11 DALFDJ020000014.1 tpg gene 20501 21376 . - . ID=gene-O5D79_002831;Name=O5D79_002831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002831 DALFDJ020000014.1 Protein Homology CDS 20501 21376 . - 0 ID=cds-HJH9164291.1;Parent=gene-O5D79_002831;Dbxref=NCBI_GP:HJH9164291.1;Name=HJH9164291.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462893.3;locus_tag=O5D79_002831;product=STM4013/SEN3800 family hydrolase;protein_id=HJH9164291.1;transl_table=11 DALFDJ020000014.1 tpg gene 21369 22394 . - . ID=gene-O5D79_002832;Name=O5D79_002832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002832 DALFDJ020000014.1 Protein Homology CDS 21369 22394 . - 0 ID=cds-HJH9164292.1;Parent=gene-O5D79_002832;Dbxref=NCBI_GP:HJH9164292.1;Name=HJH9164292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462894.3;locus_tag=O5D79_002832;product=STM4014 family protein;protein_id=HJH9164292.1;transl_table=11 DALFDJ020000014.1 tpg gene 22407 23255 . - . ID=gene-O5D79_002833;Name=O5D79_002833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002833 DALFDJ020000014.1 Protein Homology CDS 22407 23255 . - 0 ID=cds-HJH9164293.1;Parent=gene-O5D79_002833;Dbxref=NCBI_GP:HJH9164293.1;Name=HJH9164293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462895.1;locus_tag=O5D79_002833;product=STM4015 family protein;protein_id=HJH9164293.1;transl_table=11 DALFDJ020000014.1 tpg gene 23412 24104 . - . ID=gene-O5D79_002834;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=O5D79_002834 DALFDJ020000014.1 Protein Homology CDS 23412 24104 . - 0 ID=cds-HJH9164294.1;Parent=gene-O5D79_002834;Dbxref=NCBI_GP:HJH9164294.1;Name=HJH9164294.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462896.1;locus_tag=O5D79_002834;product=porin OmpL;protein_id=HJH9164294.1;transl_table=11 DALFDJ020000014.1 tpg gene 24172 25593 . - . ID=gene-O5D79_002835;Name=O5D79_002835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002835 DALFDJ020000014.1 Protein Homology CDS 24172 25593 . - 0 ID=cds-HJH9164295.1;Parent=gene-O5D79_002835;Dbxref=NCBI_GP:HJH9164295.1;Name=HJH9164295.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462897.1;locus_tag=O5D79_002835;product=MFS transporter;protein_id=HJH9164295.1;transl_table=11 DALFDJ020000014.1 tpg gene 25639 27021 . - . ID=gene-O5D79_002836;Name=O5D79_002836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002836 DALFDJ020000014.1 Protein Homology CDS 25639 27021 . - 0 ID=cds-HJH9164296.1;Parent=gene-O5D79_002836;Dbxref=NCBI_GP:HJH9164296.1;Name=HJH9164296.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462898.1;locus_tag=O5D79_002836;product=MFS transporter;protein_id=HJH9164296.1;transl_table=11 DALFDJ020000014.1 tpg gene 27067 29103 . - . ID=gene-O5D79_002837;Name=O5D79_002837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002837 DALFDJ020000014.1 Protein Homology CDS 27067 29103 . - 0 ID=cds-HJH9164297.1;Parent=gene-O5D79_002837;Dbxref=NCBI_GP:HJH9164297.1;Name=HJH9164297.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462899.1;locus_tag=O5D79_002837;product=alpha-glucosidase;protein_id=HJH9164297.1;transl_table=11 DALFDJ020000014.1 tpg gene 29147 30004 . - . ID=gene-O5D79_002838;Name=O5D79_002838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002838 DALFDJ020000014.1 Protein Homology CDS 29147 30004 . - 0 ID=cds-HJH9164298.1;Parent=gene-O5D79_002838;Dbxref=NCBI_GP:HJH9164298.1;Name=HJH9164298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462900.3;locus_tag=O5D79_002838;product=aldose-1-epimerase;protein_id=HJH9164298.1;transl_table=11 DALFDJ020000014.1 tpg gene 30008 31249 . - . ID=gene-O5D79_002839;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=O5D79_002839 DALFDJ020000014.1 Protein Homology CDS 30008 31249 . - 0 ID=cds-HJH9164299.1;Parent=gene-O5D79_002839;Dbxref=NCBI_GP:HJH9164299.1;Name=HJH9164299.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462901.1;locus_tag=O5D79_002839;product=sulfoquinovose isomerase;protein_id=HJH9164299.1;transl_table=11 DALFDJ020000014.1 tpg gene 31265 32143 . - . ID=gene-O5D79_002840;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=O5D79_002840 DALFDJ020000014.1 Protein Homology CDS 31265 32143 . - 0 ID=cds-HJH9164300.1;Parent=gene-O5D79_002840;Dbxref=NCBI_GP:HJH9164300.1;Name=HJH9164300.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462902.1;locus_tag=O5D79_002840;product=sulfofructosephosphate aldolase;protein_id=HJH9164300.1;transl_table=11 DALFDJ020000014.1 tpg gene 32166 33062 . - . ID=gene-O5D79_002841;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=O5D79_002841 DALFDJ020000014.1 Protein Homology CDS 32166 33062 . - 0 ID=cds-HJH9164301.1;Parent=gene-O5D79_002841;Dbxref=NCBI_GP:HJH9164301.1;Name=HJH9164301.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462903.1;locus_tag=O5D79_002841;product=sulfolactaldehyde 3-reductase;protein_id=HJH9164301.1;transl_table=11 DALFDJ020000014.1 tpg gene 33227 34123 . + . ID=gene-O5D79_002842;Name=O5D79_002842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002842 DALFDJ020000014.1 Protein Homology CDS 33227 34123 . + 0 ID=cds-HJH9164302.1;Parent=gene-O5D79_002842;Dbxref=NCBI_GP:HJH9164302.1;Name=HJH9164302.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462904.3;locus_tag=O5D79_002842;product=sugar kinase;protein_id=HJH9164302.1;transl_table=11 DALFDJ020000014.1 tpg gene 34157 34960 . + . ID=gene-O5D79_002843;Name=O5D79_002843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002843 DALFDJ020000014.1 Protein Homology CDS 34157 34960 . + 0 ID=cds-HJH9164303.1;Parent=gene-O5D79_002843;Dbxref=NCBI_GP:HJH9164303.1;Name=HJH9164303.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462905.1;locus_tag=O5D79_002843;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=HJH9164303.1;transl_table=11 DALFDJ020000014.1 tpg gene 35151 35750 . + . ID=gene-O5D79_002844;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=O5D79_002844 DALFDJ020000014.1 Protein Homology CDS 35151 35750 . + 0 ID=cds-HJH9164304.1;Parent=gene-O5D79_002844;Dbxref=NCBI_GP:HJH9164304.1;Name=HJH9164304.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462906.1;locus_tag=O5D79_002844;product=glucose-1-phosphatase;protein_id=HJH9164304.1;transl_table=11 DALFDJ020000014.1 tpg gene 35744 36616 . + . ID=gene-O5D79_002845;Name=O5D79_002845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002845 DALFDJ020000014.1 Protein Homology CDS 35744 36616 . + 0 ID=cds-HJH9164305.1;Parent=gene-O5D79_002845;Dbxref=NCBI_GP:HJH9164305.1;Name=HJH9164305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462907.1;locus_tag=O5D79_002845;product=virulence factor BrkB family protein;protein_id=HJH9164305.1;transl_table=11 DALFDJ020000014.1 tpg gene 36613 37050 . + . ID=gene-O5D79_002846;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=O5D79_002846 DALFDJ020000014.1 Protein Homology CDS 36613 37050 . + 0 ID=cds-HJH9164306.1;Parent=gene-O5D79_002846;Dbxref=NCBI_GP:HJH9164306.1;Name=HJH9164306.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=O5D79_002846;product=D-aminoacyl-tRNA deacylase;protein_id=HJH9164306.1;transl_table=11 DALFDJ020000014.1 tpg gene 37095 38036 . + . ID=gene-O5D79_002847;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=O5D79_002847 DALFDJ020000014.1 Protein Homology CDS 37095 38036 . + 0 ID=cds-HJH9164307.1;Parent=gene-O5D79_002847;Dbxref=NCBI_GP:HJH9164307.1;Name=HJH9164307.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=O5D79_002847;product=fatty acid biosynthesis protein FabY;protein_id=HJH9164307.1;transl_table=11 DALFDJ020000014.1 tpg gene 38051 38497 . - . ID=gene-O5D79_002848;Name=O5D79_002848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002848 DALFDJ020000014.1 Protein Homology CDS 38051 38497 . - 0 ID=cds-HJH9164308.1;Parent=gene-O5D79_002848;Dbxref=NCBI_GP:HJH9164308.1;Name=HJH9164308.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462910.3;locus_tag=O5D79_002848;product=helix-turn-helix domain-containing protein;protein_id=HJH9164308.1;transl_table=11 DALFDJ020000014.1 tpg gene 38494 38805 . - . ID=gene-O5D79_002849;Name=O5D79_002849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002849 DALFDJ020000014.1 Protein Homology CDS 38494 38805 . - 0 ID=cds-HJH9164309.1;Parent=gene-O5D79_002849;Dbxref=NCBI_GP:HJH9164309.1;Name=HJH9164309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462911.1;locus_tag=O5D79_002849;product=type II toxin-antitoxin system HigB family toxin;protein_id=HJH9164309.1;transl_table=11 DALFDJ020000014.1 tpg gene 38891 39820 . - . ID=gene-O5D79_002850;Name=O5D79_002850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002850 DALFDJ020000014.1 Protein Homology CDS 38891 39820 . - 0 ID=cds-HJH9164310.1;Parent=gene-O5D79_002850;Dbxref=NCBI_GP:HJH9164310.1;Name=HJH9164310.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462912.1;locus_tag=O5D79_002850;product=alpha/beta hydrolase;protein_id=HJH9164310.1;transl_table=11 DALFDJ020000014.1 tpg gene 40038 40349 . + . ID=gene-O5D79_002851;Name=O5D79_002851;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002851 DALFDJ020000014.1 Protein Homology CDS 40038 40349 . + 0 ID=cds-HJH9164311.1;Parent=gene-O5D79_002851;Dbxref=NCBI_GP:HJH9164311.1;Name=HJH9164311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001159636.1;locus_tag=O5D79_002851;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=HJH9164311.1;transl_table=11 DALFDJ020000014.1 tpg gene 40350 40640 . + . ID=gene-O5D79_002852;Name=O5D79_002852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002852 DALFDJ020000014.1 Protein Homology CDS 40350 40640 . + 0 ID=cds-HJH9164312.1;Parent=gene-O5D79_002852;Dbxref=NCBI_GP:HJH9164312.1;Name=HJH9164312.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264433.1;locus_tag=O5D79_002852;product=helix-turn-helix domain-containing protein;protein_id=HJH9164312.1;transl_table=11 DALFDJ020000014.1 tpg gene 40687 41616 . - . ID=gene-O5D79_002853;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=O5D79_002853 DALFDJ020000014.1 Protein Homology CDS 40687 41616 . - 0 ID=cds-HJH9164313.1;Parent=gene-O5D79_002853;Dbxref=NCBI_GP:HJH9164313.1;Name=HJH9164313.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=O5D79_002853;product=formate dehydrogenase accessory protein FdhE;protein_id=HJH9164313.1;transl_table=11 DALFDJ020000014.1 tpg gene 41613 42248 . - . ID=gene-O5D79_002854;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=O5D79_002854 DALFDJ020000014.1 Protein Homology CDS 41613 42248 . - 0 ID=cds-HJH9164314.1;Parent=gene-O5D79_002854;Dbxref=NCBI_GP:HJH9164314.1;Name=HJH9164314.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462915.1;locus_tag=O5D79_002854;product=formate dehydrogenase cytochrome b556 subunit;protein_id=HJH9164314.1;transl_table=11 DALFDJ020000014.1 tpg gene 42245 43147 . - . ID=gene-O5D79_002855;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=O5D79_002855 DALFDJ020000014.1 Protein Homology CDS 42245 43147 . - 0 ID=cds-HJH9164315.1;Parent=gene-O5D79_002855;Dbxref=NCBI_GP:HJH9164315.1;Name=HJH9164315.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=O5D79_002855;product=formate dehydrogenase subunit beta;protein_id=HJH9164315.1;transl_table=11 DALFDJ020000014.1 tpg gene 43160 46210 . - . ID=gene-O5D79_002856;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=O5D79_002856 DALFDJ020000014.1 Protein Homology CDS 43160 46210 . - 0 ID=cds-HJH9164316.1;Parent=gene-O5D79_002856;Dbxref=NCBI_GP:HJH9164316.1;Name=HJH9164316.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=O5D79_002856;product=formate dehydrogenase-N subunit alpha;protein_id=HJH9164316.1;transl_except=(pos:complement(45623..45625)%2Caa:Sec);transl_table=11 DALFDJ020000014.1 tpg gene 46405 47241 . + . ID=gene-O5D79_002857;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=O5D79_002857 DALFDJ020000014.1 Protein Homology CDS 46405 47241 . + 0 ID=cds-HJH9164317.1;Parent=gene-O5D79_002857;Dbxref=NCBI_GP:HJH9164317.1;Name=HJH9164317.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462918.1;locus_tag=O5D79_002857;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=HJH9164317.1;transl_table=11 DALFDJ020000014.1 tpg gene 47434 48534 . + . ID=gene-O5D79_002858;Name=O5D79_002858;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002858 DALFDJ020000014.1 Protein Homology CDS 47434 48534 . + 0 ID=cds-HJH9164318.1;Parent=gene-O5D79_002858;Dbxref=NCBI_GP:HJH9164318.1;Name=HJH9164318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828052.1;locus_tag=O5D79_002858;product=DUF3829 domain-containing protein;protein_id=HJH9164318.1;transl_table=11 DALFDJ020000014.1 tpg gene 48890 49213 . - . ID=gene-O5D79_002859;Name=O5D79_002859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002859 DALFDJ020000014.1 Protein Homology CDS 48890 49213 . - 0 ID=cds-HJH9164319.1;Parent=gene-O5D79_002859;Dbxref=NCBI_GP:HJH9164319.1;Name=HJH9164319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=O5D79_002859;product=AzlD domain-containing protein;protein_id=HJH9164319.1;transl_table=11 DALFDJ020000014.1 tpg gene 49213 49872 . - . ID=gene-O5D79_002860;Name=O5D79_002860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002860 DALFDJ020000014.1 Protein Homology CDS 49213 49872 . - 0 ID=cds-HJH9164320.1;Parent=gene-O5D79_002860;Dbxref=NCBI_GP:HJH9164320.1;Name=HJH9164320.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462922.1;locus_tag=O5D79_002860;product=AzlC family ABC transporter permease;protein_id=HJH9164320.1;transl_table=11 DALFDJ020000014.1 tpg gene 49973 50521 . + . ID=gene-O5D79_002861;Name=O5D79_002861;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002861 DALFDJ020000014.1 Protein Homology CDS 49973 50521 . + 0 ID=cds-HJH9164321.1;Parent=gene-O5D79_002861;Dbxref=NCBI_GP:HJH9164321.1;Name=HJH9164321.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=O5D79_002861;product=helix-turn-helix domain-containing protein;protein_id=HJH9164321.1;transl_table=11 DALFDJ020000014.1 tpg gene 50610 50924 . - . ID=gene-O5D79_002862;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=O5D79_002862 DALFDJ020000014.1 Protein Homology CDS 50610 50924 . - 0 ID=cds-HJH9164322.1;Parent=gene-O5D79_002862;Dbxref=NCBI_GP:HJH9164322.1;Name=HJH9164322.1;Ontology_term=GO:0019299,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462924.1;locus_tag=O5D79_002862;product=L-rhamnose mutarotase;protein_id=HJH9164322.1;transl_table=11 DALFDJ020000014.1 tpg gene 50921 52069 . - . ID=gene-O5D79_002863;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=O5D79_002863 DALFDJ020000014.1 Protein Homology CDS 50921 52069 . - 0 ID=cds-HJH9164323.1;Parent=gene-O5D79_002863;Dbxref=NCBI_GP:HJH9164323.1;Name=HJH9164323.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462925.1;locus_tag=O5D79_002863;product=lactaldehyde reductase;protein_id=HJH9164323.1;transl_table=11 DALFDJ020000014.1 tpg gene 52196 53023 . - . ID=gene-O5D79_002864;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=O5D79_002864 DALFDJ020000014.1 Protein Homology CDS 52196 53023 . - 0 ID=cds-HJH9164324.1;Parent=gene-O5D79_002864;Dbxref=NCBI_GP:HJH9164324.1;Name=HJH9164324.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462926.1;locus_tag=O5D79_002864;product=rhamnulose-1-phosphate aldolase;protein_id=HJH9164324.1;transl_table=11 DALFDJ020000014.1 tpg gene 53166 54425 . - . ID=gene-O5D79_002865;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=O5D79_002865 DALFDJ020000014.1 Protein Homology CDS 53166 54425 . - 0 ID=cds-HJH9164325.1;Parent=gene-O5D79_002865;Dbxref=NCBI_GP:HJH9164325.1;Name=HJH9164325.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462927.1;locus_tag=O5D79_002865;product=L-rhamnose isomerase;protein_id=HJH9164325.1;transl_table=11 DALFDJ020000014.1 tpg gene 54422 55891 . - . ID=gene-O5D79_002866;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=O5D79_002866 DALFDJ020000014.1 Protein Homology CDS 54422 55891 . - 0 ID=cds-HJH9164326.1;Parent=gene-O5D79_002866;Dbxref=NCBI_GP:HJH9164326.1;Name=HJH9164326.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=O5D79_002866;product=rhamnulokinase;protein_id=HJH9164326.1;transl_table=11 DALFDJ020000014.1 tpg gene 56179 57015 . + . ID=gene-O5D79_002867;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=O5D79_002867 DALFDJ020000014.1 Protein Homology CDS 56179 57015 . + 0 ID=cds-HJH9164327.1;Parent=gene-O5D79_002867;Dbxref=NCBI_GP:HJH9164327.1;Name=HJH9164327.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462929.1;locus_tag=O5D79_002867;product=HTH-type transcriptional activator RhaS;protein_id=HJH9164327.1;transl_table=11 DALFDJ020000014.1 tpg gene 57168 58016 . + . ID=gene-O5D79_002868;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=O5D79_002868 DALFDJ020000014.1 Protein Homology CDS 57168 58016 . + 0 ID=cds-HJH9164328.1;Parent=gene-O5D79_002868;Dbxref=NCBI_GP:HJH9164328.1;Name=HJH9164328.1;gbkey=CDS;gene=rhaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462930.1;locus_tag=O5D79_002868;product=HTH-type transcriptional activator RhaR;protein_id=HJH9164328.1;transl_table=11 DALFDJ020000014.1 tpg gene 58013 59047 . - . ID=gene-O5D79_002869;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=O5D79_002869 DALFDJ020000014.1 Protein Homology CDS 58013 59047 . - 0 ID=cds-HJH9164329.1;Parent=gene-O5D79_002869;Dbxref=NCBI_GP:HJH9164329.1;Name=HJH9164329.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462931.1;locus_tag=O5D79_002869;product=L-rhamnose/proton symporter RhaT;protein_id=HJH9164329.1;transl_table=11 DALFDJ020000014.1 tpg gene 59666 60349 . + . ID=gene-O5D79_002870;Name=O5D79_002870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002870 DALFDJ020000014.1 Protein Homology CDS 59666 60349 . + 0 ID=cds-HJH9164330.1;Parent=gene-O5D79_002870;Dbxref=NCBI_GP:HJH9164330.1;Name=HJH9164330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462932.3;locus_tag=O5D79_002870;product=oligogalacturonate-specific porin KdgM family protein;protein_id=HJH9164330.1;transl_table=11 DALFDJ020000014.1 tpg gene 60507 61814 . - . ID=gene-O5D79_002871;Name=O5D79_002871;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002871 DALFDJ020000014.1 Protein Homology CDS 60507 61814 . - 0 ID=cds-HJH9164331.1;Parent=gene-O5D79_002871;Dbxref=NCBI_GP:HJH9164331.1;Name=HJH9164331.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462933.1;locus_tag=O5D79_002871;product=TRAP transporter large permease;protein_id=HJH9164331.1;transl_table=11 DALFDJ020000014.1 tpg gene 61807 62322 . - . ID=gene-O5D79_002872;Name=O5D79_002872;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002872 DALFDJ020000014.1 Protein Homology CDS 61807 62322 . - 0 ID=cds-HJH9164332.1;Parent=gene-O5D79_002872;Dbxref=NCBI_GP:HJH9164332.1;Name=HJH9164332.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462934.1;locus_tag=O5D79_002872;product=TRAP transporter small permease;protein_id=HJH9164332.1;transl_table=11 DALFDJ020000014.1 tpg gene 62341 63324 . - . ID=gene-O5D79_002873;Name=O5D79_002873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002873 DALFDJ020000014.1 Protein Homology CDS 62341 63324 . - 0 ID=cds-HJH9164333.1;Parent=gene-O5D79_002873;Dbxref=NCBI_GP:HJH9164333.1;Name=HJH9164333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462935.1;locus_tag=O5D79_002873;product=TRAP transporter substrate-binding protein;protein_id=HJH9164333.1;transl_table=11 DALFDJ020000014.1 tpg gene 63653 64273 . + . ID=gene-O5D79_002874;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=O5D79_002874 DALFDJ020000014.1 Protein Homology CDS 63653 64273 . + 0 ID=cds-HJH9164334.1;Parent=gene-O5D79_002874;Dbxref=NCBI_GP:HJH9164334.1;Name=HJH9164334.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=O5D79_002874;product=superoxide dismutase [Mn];protein_id=HJH9164334.1;transl_table=11 DALFDJ020000014.1 tpg gene 64343 65032 . + . ID=gene-O5D79_002875;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=O5D79_002875 DALFDJ020000014.1 Protein Homology CDS 64343 65032 . + 0 ID=cds-HJH9164335.1;Parent=gene-O5D79_002875;Dbxref=NCBI_GP:HJH9164335.1;Name=HJH9164335.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559227.1;locus_tag=O5D79_002875;product=6-hydroxyaminopurine reductase;protein_id=HJH9164335.1;transl_table=11 DALFDJ020000014.1 tpg gene 65044 65439 . + . ID=gene-O5D79_002876;Name=O5D79_002876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002876 DALFDJ020000014.1 Protein Homology CDS 65044 65439 . + 0 ID=cds-HJH9164336.1;Parent=gene-O5D79_002876;Dbxref=NCBI_GP:HJH9164336.1;Name=HJH9164336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462938.1;locus_tag=O5D79_002876;product=nuclear transport factor 2 family protein;protein_id=HJH9164336.1;transl_table=11 DALFDJ020000014.1 tpg gene 65490 66863 . - . ID=gene-O5D79_002877;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=O5D79_002877 DALFDJ020000014.1 Protein Homology CDS 65490 66863 . - 0 ID=cds-HJH9164337.1;Parent=gene-O5D79_002877;Dbxref=NCBI_GP:HJH9164337.1;Name=HJH9164337.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=O5D79_002877;product=envelope stress sensor histidine kinase CpxA;protein_id=HJH9164337.1;transl_table=11 DALFDJ020000014.1 tpg gene 66860 67558 . - . ID=gene-O5D79_002878;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=O5D79_002878 DALFDJ020000014.1 Protein Homology CDS 66860 67558 . - 0 ID=cds-HJH9164338.1;Parent=gene-O5D79_002878;Dbxref=NCBI_GP:HJH9164338.1;Name=HJH9164338.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=O5D79_002878;product=envelope stress response regulator transcription factor CpxR;protein_id=HJH9164338.1;transl_table=11 DALFDJ020000014.1 tpg gene 67709 68209 . + . ID=gene-O5D79_002879;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=O5D79_002879 DALFDJ020000014.1 Protein Homology CDS 67709 68209 . + 0 ID=cds-HJH9164339.1;Parent=gene-O5D79_002879;Dbxref=NCBI_GP:HJH9164339.1;Name=HJH9164339.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462941.1;locus_tag=O5D79_002879;product=cell-envelope stress modulator CpxP;protein_id=HJH9164339.1;transl_table=11 DALFDJ020000014.1 tpg gene 68561 69343 . + . ID=gene-O5D79_002880;Name=O5D79_002880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002880 DALFDJ020000014.1 Protein Homology CDS 68561 69343 . + 0 ID=cds-HJH9164340.1;Parent=gene-O5D79_002880;Dbxref=NCBI_GP:HJH9164340.1;Name=HJH9164340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932274.1;locus_tag=O5D79_002880;product=peptide transporter;protein_id=HJH9164340.1;transl_table=11 DALFDJ020000014.1 tpg gene 69668 70570 . + . ID=gene-O5D79_002881;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=O5D79_002881 DALFDJ020000014.1 Protein Homology CDS 69668 70570 . + 0 ID=cds-HJH9164341.1;Parent=gene-O5D79_002881;Dbxref=NCBI_GP:HJH9164341.1;Name=HJH9164341.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462942.1;locus_tag=O5D79_002881;product=CDF family cation-efflux transporter FieF;protein_id=HJH9164341.1;transl_table=11 DALFDJ020000014.1 tpg gene 70755 71717 . + . ID=gene-O5D79_002882;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=O5D79_002882 DALFDJ020000014.1 Protein Homology CDS 70755 71717 . + 0 ID=cds-HJH9164342.1;Parent=gene-O5D79_002882;Dbxref=NCBI_GP:HJH9164342.1;Name=HJH9164342.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=O5D79_002882;product=6-phosphofructokinase;protein_id=HJH9164342.1;transl_table=11 DALFDJ020000014.1 tpg gene 71921 72910 . + . ID=gene-O5D79_002883;Name=O5D79_002883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002883 DALFDJ020000014.1 Protein Homology CDS 71921 72910 . + 0 ID=cds-HJH9164343.1;Parent=gene-O5D79_002883;Dbxref=NCBI_GP:HJH9164343.1;Name=HJH9164343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=O5D79_002883;product=sulfate ABC transporter substrate-binding protein;protein_id=HJH9164343.1;transl_table=11 DALFDJ020000014.1 tpg gene 73011 73766 . + . ID=gene-O5D79_002884;Name=O5D79_002884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002884 DALFDJ020000014.1 Protein Homology CDS 73011 73766 . + 0 ID=cds-HJH9164344.1;Parent=gene-O5D79_002884;Dbxref=NCBI_GP:HJH9164344.1;Name=HJH9164344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=O5D79_002884;product=CDP-diacylglycerol diphosphatase;protein_id=HJH9164344.1;transl_table=11 DALFDJ020000014.1 tpg gene 74029 75363 . + . ID=gene-O5D79_002885;Name=O5D79_002885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002885 DALFDJ020000014.1 Protein Homology CDS 74029 75363 . + 0 ID=cds-HJH9164345.1;Parent=gene-O5D79_002885;Dbxref=NCBI_GP:HJH9164345.1;Name=HJH9164345.1;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462946.1;locus_tag=O5D79_002885;product=MFS transporter;protein_id=HJH9164345.1;transl_table=11 DALFDJ020000014.1 tpg gene 75374 76333 . + . ID=gene-O5D79_002886;Name=O5D79_002886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002886 DALFDJ020000014.1 Protein Homology CDS 75374 76333 . + 0 ID=cds-HJH9164346.1;Parent=gene-O5D79_002886;Dbxref=NCBI_GP:HJH9164346.1;Name=HJH9164346.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462947.1;locus_tag=O5D79_002886;product=aminoimidazole riboside kinase;protein_id=HJH9164346.1;transl_table=11 DALFDJ020000014.1 tpg gene 76343 77383 . + . ID=gene-O5D79_002887;Name=O5D79_002887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002887 DALFDJ020000014.1 Protein Homology CDS 76343 77383 . + 0 ID=cds-HJH9164347.1;Parent=gene-O5D79_002887;Dbxref=NCBI_GP:HJH9164347.1;Name=HJH9164347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462948.1;locus_tag=O5D79_002887;product=ADP-ribosylglycohydrolase family protein;protein_id=HJH9164347.1;transl_table=11 DALFDJ020000014.1 tpg gene 77446 78168 . + . ID=gene-O5D79_002888;Name=O5D79_002888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002888 DALFDJ020000014.1 Protein Homology CDS 77446 78168 . + 0 ID=cds-HJH9164348.1;Parent=gene-O5D79_002888;Dbxref=NCBI_GP:HJH9164348.1;Name=HJH9164348.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462949.1;locus_tag=O5D79_002888;product=GntR family transcriptional regulator;protein_id=HJH9164348.1;transl_table=11 DALFDJ020000014.1 tpg pseudogene 78266 78391 . + . ID=gene-O5D79_002889;Name=O5D79_002889;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_002889;pseudo=true DALFDJ020000014.1 Protein Homology CDS 78266 78391 . + 0 ID=cds-O5D79_002889;Parent=gene-O5D79_002889;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229472.1;locus_tag=O5D79_002889;product=hypothetical protein;pseudo=true;transl_table=11 DALFDJ020000014.1 tpg pseudogene 78443 78583 . + . ID=gene-O5D79_002890;Name=O5D79_002890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_002890;pseudo=true DALFDJ020000014.1 Protein Homology CDS 78443 78583 . + 0 ID=cds-O5D79_002890;Parent=gene-O5D79_002890;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008654,GO:0008715,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462945.1;locus_tag=O5D79_002890;product=CDP-diacylglycerol diphosphatase;pseudo=true;transl_table=11 DALFDJ020000014.1 tpg gene 78673 79023 . - . ID=gene-O5D79_002891;Name=O5D79_002891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002891 DALFDJ020000014.1 Protein Homology CDS 78673 79023 . - 0 ID=cds-HJH9164349.1;Parent=gene-O5D79_002891;Dbxref=NCBI_GP:HJH9164349.1;Name=HJH9164349.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742380.1;locus_tag=O5D79_002891;product=cupin domain-containing protein;protein_id=HJH9164349.1;transl_table=11 DALFDJ020000014.1 tpg gene 79037 80629 . - . ID=gene-O5D79_002892;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=O5D79_002892 DALFDJ020000014.1 Protein Homology CDS 79037 80629 . - 0 ID=cds-HJH9164350.1;Parent=gene-O5D79_002892;Dbxref=NCBI_GP:HJH9164350.1;Name=HJH9164350.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462953.1;locus_tag=O5D79_002892;product=autoinducer-2 kinase;protein_id=HJH9164350.1;transl_table=11 DALFDJ020000014.1 tpg gene 80718 81677 . - . ID=gene-O5D79_002893;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=O5D79_002893 DALFDJ020000014.1 Protein Homology CDS 80718 81677 . - 0 ID=cds-HJH9164351.1;Parent=gene-O5D79_002893;Dbxref=NCBI_GP:HJH9164351.1;Name=HJH9164351.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462954.1;locus_tag=O5D79_002893;product=transcriptional regulator LsrR;protein_id=HJH9164351.1;transl_table=11 DALFDJ020000014.1 tpg gene 81933 83468 . + . ID=gene-O5D79_002894;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=O5D79_002894 DALFDJ020000014.1 Protein Homology CDS 81933 83468 . + 0 ID=cds-HJH9164352.1;Parent=gene-O5D79_002894;Dbxref=NCBI_GP:HJH9164352.1;Name=HJH9164352.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462955.1;locus_tag=O5D79_002894;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=HJH9164352.1;transl_table=11 DALFDJ020000014.1 tpg gene 83462 84505 . + . ID=gene-O5D79_002895;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=O5D79_002895 DALFDJ020000014.1 Protein Homology CDS 83462 84505 . + 0 ID=cds-HJH9164353.1;Parent=gene-O5D79_002895;Dbxref=NCBI_GP:HJH9164353.1;Name=HJH9164353.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462956.1;locus_tag=O5D79_002895;product=autoinducer 2 ABC transporter permease LsrC;protein_id=HJH9164353.1;transl_table=11 DALFDJ020000014.1 tpg gene 84502 85503 . + . ID=gene-O5D79_002896;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=O5D79_002896 DALFDJ020000014.1 Protein Homology CDS 84502 85503 . + 0 ID=cds-HJH9164354.1;Parent=gene-O5D79_002896;Dbxref=NCBI_GP:HJH9164354.1;Name=HJH9164354.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462957.1;locus_tag=O5D79_002896;product=autoinducer 2 ABC transporter permease LsrD;protein_id=HJH9164354.1;transl_table=11 DALFDJ020000014.1 tpg gene 85532 86554 . + . ID=gene-O5D79_002897;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=O5D79_002897 DALFDJ020000014.1 Protein Homology CDS 85532 86554 . + 0 ID=cds-HJH9164355.1;Parent=gene-O5D79_002897;Dbxref=NCBI_GP:HJH9164355.1;Name=HJH9164355.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462958.1;locus_tag=O5D79_002897;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=HJH9164355.1;transl_table=11 DALFDJ020000014.1 tpg gene 86583 87458 . + . ID=gene-O5D79_002898;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=O5D79_002898 DALFDJ020000014.1 Protein Homology CDS 86583 87458 . + 0 ID=cds-HJH9164356.1;Parent=gene-O5D79_002898;Dbxref=NCBI_GP:HJH9164356.1;Name=HJH9164356.1;gbkey=CDS;gene=lsrF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774144.1;locus_tag=O5D79_002898;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase LsrF;protein_id=HJH9164356.1;transl_table=11 DALFDJ020000014.1 tpg gene 87541 87831 . + . ID=gene-O5D79_002899;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=O5D79_002899 DALFDJ020000014.1 Protein Homology CDS 87541 87831 . + 0 ID=cds-HJH9164357.1;Parent=gene-O5D79_002899;Dbxref=NCBI_GP:HJH9164357.1;Name=HJH9164357.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=O5D79_002899;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=HJH9164357.1;transl_table=11 DALFDJ020000014.1 tpg gene 87841 88605 . + . ID=gene-O5D79_002900;Name=O5D79_002900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002900 DALFDJ020000014.1 Protein Homology CDS 87841 88605 . + 0 ID=cds-HJH9164358.1;Parent=gene-O5D79_002900;Dbxref=NCBI_GP:HJH9164358.1;Name=HJH9164358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462961.1;locus_tag=O5D79_002900;product=epimerase;protein_id=HJH9164358.1;transl_table=11 DALFDJ020000014.1 tpg gene 88697 89464 . - . ID=gene-O5D79_002901;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=O5D79_002901 DALFDJ020000014.1 Protein Homology CDS 88697 89464 . - 0 ID=cds-HJH9164359.1;Parent=gene-O5D79_002901;Dbxref=NCBI_GP:HJH9164359.1;Name=HJH9164359.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462962.1;locus_tag=O5D79_002901;product=triose-phosphate isomerase;protein_id=HJH9164359.1;transl_table=11 DALFDJ020000014.1 tpg gene 89577 90173 . - . ID=gene-O5D79_002902;Name=O5D79_002902;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002902 DALFDJ020000014.1 Protein Homology CDS 89577 90173 . - 0 ID=cds-HJH9164360.1;Parent=gene-O5D79_002902;Dbxref=NCBI_GP:HJH9164360.1;Name=HJH9164360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462963.1;locus_tag=O5D79_002902;product=YiiQ family protein;protein_id=HJH9164360.1;transl_table=11 DALFDJ020000014.1 tpg gene 90274 90702 . + . ID=gene-O5D79_002903;Name=O5D79_002903;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002903 DALFDJ020000014.1 Protein Homology CDS 90274 90702 . + 0 ID=cds-HJH9164361.1;Parent=gene-O5D79_002903;Dbxref=NCBI_GP:HJH9164361.1;Name=HJH9164361.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462964.1;locus_tag=O5D79_002903;product=DUF805 domain-containing protein;protein_id=HJH9164361.1;transl_table=11 DALFDJ020000014.1 tpg gene 90809 91555 . - . ID=gene-O5D79_002904;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=O5D79_002904 DALFDJ020000014.1 Protein Homology CDS 90809 91555 . - 0 ID=cds-HJH9164362.1;Parent=gene-O5D79_002904;Dbxref=NCBI_GP:HJH9164362.1;Name=HJH9164362.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462965.1;locus_tag=O5D79_002904;product=ferredoxin--NADP(+) reductase;protein_id=HJH9164362.1;transl_table=11 DALFDJ020000014.1 tpg gene 91652 92662 . - . ID=gene-O5D79_002905;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=O5D79_002905 DALFDJ020000014.1 Protein Homology CDS 91652 92662 . - 0 ID=cds-HJH9164363.1;Parent=gene-O5D79_002905;Dbxref=NCBI_GP:HJH9164363.1;Name=HJH9164363.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462966.1;locus_tag=O5D79_002905;product=class II fructose-bisphosphatase;protein_id=HJH9164363.1;transl_table=11 DALFDJ020000014.1 tpg gene 92774 94282 . - . ID=gene-O5D79_002906;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=O5D79_002906 DALFDJ020000014.1 Protein Homology CDS 92774 94282 . - 0 ID=cds-HJH9164364.1;Parent=gene-O5D79_002906;Dbxref=NCBI_GP:HJH9164364.1;Name=HJH9164364.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462967.1;locus_tag=O5D79_002906;product=glycerol kinase GlpK;protein_id=HJH9164364.1;transl_table=11 DALFDJ020000014.1 tpg gene 94303 95148 . - . ID=gene-O5D79_002907;Name=O5D79_002907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002907 DALFDJ020000014.1 Protein Homology CDS 94303 95148 . - 0 ID=cds-HJH9164365.1;Parent=gene-O5D79_002907;Dbxref=NCBI_GP:HJH9164365.1;Name=HJH9164365.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462968.1;locus_tag=O5D79_002907;product=MIP/aquaporin family protein;protein_id=HJH9164365.1;transl_table=11 DALFDJ020000014.1 tpg gene 95547 95786 . + . ID=gene-O5D79_002908;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=O5D79_002908 DALFDJ020000014.1 Protein Homology CDS 95547 95786 . + 0 ID=cds-HJH9164366.1;Parent=gene-O5D79_002908;Dbxref=NCBI_GP:HJH9164366.1;Name=HJH9164366.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229475.1;locus_tag=O5D79_002908;product=septal ring assembly protein ZapB;protein_id=HJH9164366.1;transl_table=11 DALFDJ020000014.1 tpg gene 96008 96493 . - . ID=gene-O5D79_002909;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=O5D79_002909 DALFDJ020000014.1 Protein Homology CDS 96008 96493 . - 0 ID=cds-HJH9164367.1;Parent=gene-O5D79_002909;Dbxref=NCBI_GP:HJH9164367.1;Name=HJH9164367.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=O5D79_002909;product=ribonuclease E activity regulator RraA;protein_id=HJH9164367.1;transl_table=11 DALFDJ020000014.1 tpg gene 96586 97515 . - . ID=gene-O5D79_002910;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=O5D79_002910 DALFDJ020000014.1 Protein Homology CDS 96586 97515 . - 0 ID=cds-HJH9164368.1;Parent=gene-O5D79_002910;Dbxref=NCBI_GP:HJH9164368.1;Name=HJH9164368.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462971.1;locus_tag=O5D79_002910;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=HJH9164368.1;transl_table=11 DALFDJ020000014.1 tpg gene 97582 98913 . - . ID=gene-O5D79_002911;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=O5D79_002911 DALFDJ020000014.1 Protein Homology CDS 97582 98913 . - 0 ID=cds-HJH9164369.1;Parent=gene-O5D79_002911;Dbxref=NCBI_GP:HJH9164369.1;Name=HJH9164369.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=O5D79_002911;product=HslU--HslV peptidase ATPase subunit;protein_id=HJH9164369.1;transl_table=11 DALFDJ020000014.1 tpg gene 98923 99453 . - . ID=gene-O5D79_002912;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=O5D79_002912 DALFDJ020000014.1 Protein Homology CDS 98923 99453 . - 0 ID=cds-HJH9164370.1;Parent=gene-O5D79_002912;Dbxref=NCBI_GP:HJH9164370.1;Name=HJH9164370.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462973.1;locus_tag=O5D79_002912;product=ATP-dependent protease subunit HslV;protein_id=HJH9164370.1;transl_table=11 DALFDJ020000014.1 tpg gene 99545 100513 . - . ID=gene-O5D79_002913;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=O5D79_002913 DALFDJ020000014.1 Protein Homology CDS 99545 100513 . - 0 ID=cds-HJH9164371.1;Parent=gene-O5D79_002913;Dbxref=NCBI_GP:HJH9164371.1;Name=HJH9164371.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462974.1;locus_tag=O5D79_002913;product=cell division protein FtsN;protein_id=HJH9164371.1;transl_table=11 DALFDJ020000014.1 tpg gene 100607 101632 . - . ID=gene-O5D79_002914;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=O5D79_002914 DALFDJ020000014.1 Protein Homology CDS 100607 101632 . - 0 ID=cds-HJH9164372.1;Parent=gene-O5D79_002914;Dbxref=NCBI_GP:HJH9164372.1;Name=HJH9164372.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462975.1;locus_tag=O5D79_002914;product=DNA-binding transcriptional regulator CytR;protein_id=HJH9164372.1;transl_table=11 DALFDJ020000014.1 tpg gene 101787 103985 . - . ID=gene-O5D79_002915;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=O5D79_002915 DALFDJ020000014.1 Protein Homology CDS 101787 103985 . - 0 ID=cds-HJH9164373.1;Parent=gene-O5D79_002915;Dbxref=NCBI_GP:HJH9164373.1;Name=HJH9164373.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=O5D79_002915;product=primosomal protein N';protein_id=HJH9164373.1;transl_table=11 DALFDJ020000014.1 tpg gene 104189 104401 . + . ID=gene-O5D79_002916;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=O5D79_002916 DALFDJ020000014.1 Protein Homology CDS 104189 104401 . + 0 ID=cds-HJH9164374.1;Parent=gene-O5D79_002916;Dbxref=NCBI_GP:HJH9164374.1;Name=HJH9164374.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462977.1;locus_tag=O5D79_002916;product=50S ribosomal protein L31;protein_id=HJH9164374.1;transl_table=11 DALFDJ020000014.1 tpg pseudogene 104681 104794 . + . ID=gene-O5D79_002917;Name=O5D79_002917;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_002917;pseudo=true DALFDJ020000014.1 Protein Homology CDS 104681 104794 . + 0 ID=cds-O5D79_002917;Parent=gene-O5D79_002917;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308587.2;locus_tag=O5D79_002917;product=hypothetical protein;pseudo=true;transl_table=11 DALFDJ020000014.1 tpg gene 105397 107187 . - . ID=gene-O5D79_002918;Name=O5D79_002918;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002918 DALFDJ020000014.1 Protein Homology CDS 105397 107187 . - 0 ID=cds-HJH9164375.1;Parent=gene-O5D79_002918;Dbxref=NCBI_GP:HJH9164375.1;Name=HJH9164375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462979.1;locus_tag=O5D79_002918;product=aryl-sulfate sulfotransferase;protein_id=HJH9164375.1;transl_table=11 DALFDJ020000014.1 tpg gene 107644 107961 . - . ID=gene-O5D79_002919;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=O5D79_002919 DALFDJ020000014.1 Protein Homology CDS 107644 107961 . - 0 ID=cds-HJH9164376.1;Parent=gene-O5D79_002919;Dbxref=NCBI_GP:HJH9164376.1;Name=HJH9164376.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=O5D79_002919;product=met regulon transcriptional regulator MetJ;protein_id=HJH9164376.1;transl_table=11 DALFDJ020000014.1 tpg gene 108226 109386 . + . ID=gene-O5D79_002920;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=O5D79_002920 DALFDJ020000014.1 Protein Homology CDS 108226 109386 . + 0 ID=cds-HJH9164377.1;Parent=gene-O5D79_002920;Dbxref=NCBI_GP:HJH9164377.1;Name=HJH9164377.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462981.1;locus_tag=O5D79_002920;product=cystathionine gamma-synthase;protein_id=HJH9164377.1;transl_table=11 DALFDJ020000014.1 tpg gene 109389 111821 . + . ID=gene-O5D79_002921;Name=O5D79_002921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002921 DALFDJ020000014.1 Protein Homology CDS 109389 111821 . + 0 ID=cds-HJH9164378.1;Parent=gene-O5D79_002921;Dbxref=NCBI_GP:HJH9164378.1;Name=HJH9164378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=O5D79_002921;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=HJH9164378.1;transl_table=11 DALFDJ020000014.1 tpg gene 111947 112804 . - . ID=gene-O5D79_002922;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=O5D79_002922 DALFDJ020000014.1 Protein Homology CDS 111947 112804 . - 0 ID=cds-HJH9164379.1;Parent=gene-O5D79_002922;Dbxref=NCBI_GP:HJH9164379.1;Name=HJH9164379.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462983.1;locus_tag=O5D79_002922;product=small-conductance mechanosensitive channel MscS;protein_id=HJH9164379.1;transl_table=11 DALFDJ020000014.1 tpg gene 112807 113805 . - . ID=gene-O5D79_002923;Name=O5D79_002923;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002923 DALFDJ020000014.1 Protein Homology CDS 112807 113805 . - 0 ID=cds-HJH9164380.1;Parent=gene-O5D79_002923;Dbxref=NCBI_GP:HJH9164380.1;Name=HJH9164380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406820.1;locus_tag=O5D79_002923;product=hypothetical protein;protein_id=HJH9164380.1;transl_table=11 DALFDJ020000014.1 tpg gene 114040 115164 . - . ID=gene-O5D79_002924;Name=O5D79_002924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002924 DALFDJ020000014.1 Protein Homology CDS 114040 115164 . - 0 ID=cds-HJH9164381.1;Parent=gene-O5D79_002924;Dbxref=NCBI_GP:HJH9164381.1;Name=HJH9164381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462984.1;locus_tag=O5D79_002924;product=cytoplasmic protein;protein_id=HJH9164381.1;transl_table=11 DALFDJ020000014.1 tpg gene 115300 116856 . + . ID=gene-O5D79_002925;Name=O5D79_002925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002925 DALFDJ020000014.1 Protein Homology CDS 115300 116856 . + 0 ID=cds-HJH9164382.1;Parent=gene-O5D79_002925;Dbxref=NCBI_GP:HJH9164382.1;Name=HJH9164382.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462985.1;locus_tag=O5D79_002925;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=HJH9164382.1;transl_table=11 DALFDJ020000014.1 tpg gene 117051 117941 . + . ID=gene-O5D79_002926;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=O5D79_002926 DALFDJ020000014.1 Protein Homology CDS 117051 117941 . + 0 ID=cds-HJH9164383.1;Parent=gene-O5D79_002926;Dbxref=NCBI_GP:HJH9164383.1;Name=HJH9164383.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462986.1;locus_tag=O5D79_002926;product=methylenetetrahydrofolate reductase;protein_id=HJH9164383.1;transl_table=11 DALFDJ020000014.1 tpg gene 118106 120286 . + . ID=gene-O5D79_002927;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=O5D79_002927 DALFDJ020000014.1 Protein Homology CDS 118106 120286 . + 0 ID=cds-HJH9164384.1;Parent=gene-O5D79_002927;Dbxref=NCBI_GP:HJH9164384.1;Name=HJH9164384.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462987.1;locus_tag=O5D79_002927;product=catalase/peroxidase HPI;protein_id=HJH9164384.1;transl_table=11 DALFDJ020000014.1 tpg gene 120344 120967 . - . ID=gene-O5D79_002928;Name=O5D79_002928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002928 DALFDJ020000014.1 Protein Homology CDS 120344 120967 . - 0 ID=cds-HJH9164385.1;Parent=gene-O5D79_002928;Dbxref=NCBI_GP:HJH9164385.1;Name=HJH9164385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462988.1;locus_tag=O5D79_002928;product=DUF1287 domain-containing protein;protein_id=HJH9164385.1;transl_table=11 DALFDJ020000014.1 tpg gene 121226 122329 . - . ID=gene-O5D79_002929;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=O5D79_002929 DALFDJ020000014.1 Protein Homology CDS 121226 122329 . - 0 ID=cds-HJH9164386.1;Parent=gene-O5D79_002929;Dbxref=NCBI_GP:HJH9164386.1;Name=HJH9164386.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=O5D79_002929;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=HJH9164386.1;transl_table=11 DALFDJ020000014.1 tpg gene 122341 123003 . - . ID=gene-O5D79_002930;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=O5D79_002930 DALFDJ020000014.1 Protein Homology CDS 122341 123003 . - 0 ID=cds-HJH9164387.1;Parent=gene-O5D79_002930;Dbxref=NCBI_GP:HJH9164387.1;Name=HJH9164387.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=O5D79_002930;product=fructose-6-phosphate aldolase;protein_id=HJH9164387.1;transl_table=11 DALFDJ020000014.1 tpg gene 123258 124094 . - . ID=gene-O5D79_002931;Name=O5D79_002931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002931 DALFDJ020000014.1 Protein Homology CDS 123258 124094 . - 0 ID=cds-HJH9164388.1;Parent=gene-O5D79_002931;Dbxref=NCBI_GP:HJH9164388.1;Name=HJH9164388.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506508.1;locus_tag=O5D79_002931;product=helix-turn-helix transcriptional regulator;protein_id=HJH9164388.1;transl_table=11 DALFDJ020000014.1 tpg gene 124255 125988 . - . ID=gene-O5D79_002932;Name=O5D79_002932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002932 DALFDJ020000014.1 Protein Homology CDS 124255 125988 . - 0 ID=cds-HJH9164389.1;Parent=gene-O5D79_002932;Dbxref=NCBI_GP:HJH9164389.1;Name=HJH9164389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462998.1;locus_tag=O5D79_002932;product=phosphoethanolamine transferase CptA;protein_id=HJH9164389.1;transl_table=11 DALFDJ020000014.1 tpg gene 126199 128850 . - . ID=gene-O5D79_002933;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=O5D79_002933 DALFDJ020000014.1 Protein Homology CDS 126199 128850 . - 0 ID=cds-HJH9164390.1;Parent=gene-O5D79_002933;Dbxref=NCBI_GP:HJH9164390.1;Name=HJH9164390.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=O5D79_002933;product=phosphoenolpyruvate carboxylase;protein_id=HJH9164390.1;transl_table=11 DALFDJ020000014.1 tpg gene 129219 130370 . - . ID=gene-O5D79_002934;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=O5D79_002934 DALFDJ020000014.1 Protein Homology CDS 129219 130370 . - 0 ID=cds-HJH9164391.1;Parent=gene-O5D79_002934;Dbxref=NCBI_GP:HJH9164391.1;Name=HJH9164391.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463000.1;locus_tag=O5D79_002934;product=acetylornithine deacetylase;protein_id=HJH9164391.1;transl_table=11 DALFDJ020000014.1 tpg gene 130459 131463 . + . ID=gene-O5D79_002935;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=O5D79_002935 DALFDJ020000014.1 Protein Homology CDS 130459 131463 . + 0 ID=cds-HJH9164392.1;Parent=gene-O5D79_002935;Dbxref=NCBI_GP:HJH9164392.1;Name=HJH9164392.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=O5D79_002935;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=HJH9164392.1;transl_table=11 DALFDJ020000014.1 tpg gene 131471 132247 . + . ID=gene-O5D79_002936;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=O5D79_002936 DALFDJ020000014.1 Protein Homology CDS 131471 132247 . + 0 ID=cds-HJH9164393.1;Parent=gene-O5D79_002936;Dbxref=NCBI_GP:HJH9164393.1;Name=HJH9164393.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=O5D79_002936;product=acetylglutamate kinase;protein_id=HJH9164393.1;transl_table=11 DALFDJ020000014.1 tpg gene 132365 133741 . + . ID=gene-O5D79_002937;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=O5D79_002937 DALFDJ020000014.1 Protein Homology CDS 132365 133741 . + 0 ID=cds-HJH9164394.1;Parent=gene-O5D79_002937;Dbxref=NCBI_GP:HJH9164394.1;Name=HJH9164394.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463003.1;locus_tag=O5D79_002937;product=argininosuccinate lyase;protein_id=HJH9164394.1;transl_table=11 DALFDJ020000014.1 tpg gene 134026 134943 . + . ID=gene-O5D79_002938;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=O5D79_002938 DALFDJ020000014.1 Protein Homology CDS 134026 134943 . + 0 ID=cds-HJH9164395.1;Parent=gene-O5D79_002938;Dbxref=NCBI_GP:HJH9164395.1;Name=HJH9164395.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=O5D79_002938;product=DNA-binding transcriptional regulator OxyR;protein_id=HJH9164395.1;transl_table=11 DALFDJ020000014.1 tpg gene 134926 136326 . - . ID=gene-O5D79_002939;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=O5D79_002939 DALFDJ020000014.1 Protein Homology CDS 134926 136326 . - 0 ID=cds-HJH9164396.1;Parent=gene-O5D79_002939;Dbxref=NCBI_GP:HJH9164396.1;Name=HJH9164396.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=O5D79_002939;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=HJH9164396.1;transl_table=11 DALFDJ020000014.1 tpg gene 136525 137160 . + . ID=gene-O5D79_002940;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=O5D79_002940 DALFDJ020000014.1 Protein Homology CDS 136525 137160 . + 0 ID=cds-HJH9164397.1;Parent=gene-O5D79_002940;Dbxref=NCBI_GP:HJH9164397.1;Name=HJH9164397.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463006.3;locus_tag=O5D79_002940;product=HTH-type transcriptional repressor FabR;protein_id=HJH9164397.1;transl_table=11 DALFDJ020000014.1 tpg gene 137176 137535 . + . ID=gene-O5D79_002941;Name=O5D79_002941;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002941 DALFDJ020000014.1 Protein Homology CDS 137176 137535 . + 0 ID=cds-HJH9164398.1;Parent=gene-O5D79_002941;Dbxref=NCBI_GP:HJH9164398.1;Name=HJH9164398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463007.1;locus_tag=O5D79_002941;product=YijD family membrane protein;protein_id=HJH9164398.1;transl_table=11 DALFDJ020000014.1 tpg gene 137582 138682 . - . ID=gene-O5D79_002942;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=O5D79_002942 DALFDJ020000014.1 Protein Homology CDS 137582 138682 . - 0 ID=cds-HJH9164399.1;Parent=gene-O5D79_002942;Dbxref=NCBI_GP:HJH9164399.1;Name=HJH9164399.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463008.1;locus_tag=O5D79_002942;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=HJH9164399.1;transl_table=11 DALFDJ020000014.1 cmsearch riboswitch 138797 138989 . + . ID=id-DALFDJ020000014.1:138797..138989;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch DALFDJ020000014.1 tpg pseudogene 139056 140900 . + . ID=gene-O5D79_002943;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=pseudogene;locus_tag=O5D79_002943;pseudo=true DALFDJ020000014.1 Protein Homology CDS 139056 140900 . + 0 ID=cds-O5D79_002943;Parent=gene-O5D79_002943;Note=internal stop;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463009.1;locus_tag=O5D79_002943;product=TonB-dependent vitamin B12 receptor BtuB;pseudo=true;transl_table=11 DALFDJ020000014.1 tpg gene 140845 141696 . + . ID=gene-O5D79_002944;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=O5D79_002944 DALFDJ020000014.1 Protein Homology CDS 140845 141696 . + 0 ID=cds-HJH9164400.1;Parent=gene-O5D79_002944;Dbxref=NCBI_GP:HJH9164400.1;Name=HJH9164400.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463010.1;locus_tag=O5D79_002944;product=glutamate racemase;protein_id=HJH9164400.1;transl_table=11 ##sequence-region DALFDJ020000015.1 1 127835 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000015.1 tpg region 1 127835 . + . ID=DALFDJ020000015.1:1..127835;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000015.1 tpg gene 35 928 . + . ID=gene-O5D79_002945;Name=O5D79_002945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002945 DALFDJ020000015.1 Protein Homology CDS 35 928 . + 0 ID=cds-HJH9164401.1;Parent=gene-O5D79_002945;Dbxref=NCBI_GP:HJH9164401.1;Name=HJH9164401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461968.1;locus_tag=O5D79_002945;product=transporter;protein_id=HJH9164401.1;transl_table=11 DALFDJ020000015.1 tpg gene 976 2409 . - . ID=gene-O5D79_002946;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=O5D79_002946 DALFDJ020000015.1 Protein Homology CDS 976 2409 . - 0 ID=cds-HJH9164402.1;Parent=gene-O5D79_002946;Dbxref=NCBI_GP:HJH9164402.1;Name=HJH9164402.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461967.1;locus_tag=O5D79_002946;product=6-phospho-beta-glucosidase BglA;protein_id=HJH9164402.1;transl_table=11 DALFDJ020000015.1 tpg gene 2559 2870 . + . ID=gene-O5D79_002947;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=O5D79_002947 DALFDJ020000015.1 Protein Homology CDS 2559 2870 . + 0 ID=cds-HJH9164403.1;Parent=gene-O5D79_002947;Dbxref=NCBI_GP:HJH9164403.1;Name=HJH9164403.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461966.1;locus_tag=O5D79_002947;product=N(4)-acetylcytidine aminohydrolase;protein_id=HJH9164403.1;transl_table=11 DALFDJ020000015.1 tpg gene 3034 3693 . + . ID=gene-O5D79_002948;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=O5D79_002948 DALFDJ020000015.1 Protein Homology CDS 3034 3693 . + 0 ID=cds-HJH9164404.1;Parent=gene-O5D79_002948;Dbxref=NCBI_GP:HJH9164404.1;Name=HJH9164404.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461965.1;locus_tag=O5D79_002948;product=PAQR family membrane homeostasis protein TrhA;protein_id=HJH9164404.1;transl_table=11 DALFDJ020000015.1 tpg gene 3809 4789 . - . ID=gene-O5D79_002949;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=O5D79_002949 DALFDJ020000015.1 Protein Homology CDS 3809 4789 . - 0 ID=cds-HJH9164405.1;Parent=gene-O5D79_002949;Dbxref=NCBI_GP:HJH9164405.1;Name=HJH9164405.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461964.1;locus_tag=O5D79_002949;product=tRNA-modifying protein YgfZ;protein_id=HJH9164405.1;transl_table=11 DALFDJ020000015.1 tpg gene 5039 5305 . + . ID=gene-O5D79_002950;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=O5D79_002950 DALFDJ020000015.1 Protein Homology CDS 5039 5305 . + 0 ID=cds-HJH9164406.1;Parent=gene-O5D79_002950;Dbxref=NCBI_GP:HJH9164406.1;Name=HJH9164406.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=O5D79_002950;product=FAD assembly factor SdhE;protein_id=HJH9164406.1;transl_table=11 DALFDJ020000015.1 tpg gene 5286 5699 . + . ID=gene-O5D79_002951;Name=O5D79_002951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002951 DALFDJ020000015.1 Protein Homology CDS 5286 5699 . + 0 ID=cds-HJH9164407.1;Parent=gene-O5D79_002951;Dbxref=NCBI_GP:HJH9164407.1;Name=HJH9164407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461962.1;locus_tag=O5D79_002951;product=protein YgfX;protein_id=HJH9164407.1;transl_table=11 DALFDJ020000015.1 tpg gene 5752 6273 . - . ID=gene-O5D79_002952;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=O5D79_002952 DALFDJ020000015.1 Protein Homology CDS 5752 6273 . - 0 ID=cds-HJH9164408.1;Parent=gene-O5D79_002952;Dbxref=NCBI_GP:HJH9164408.1;Name=HJH9164408.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461961.1;locus_tag=O5D79_002952;product=flavodoxin FldB;protein_id=HJH9164408.1;transl_table=11 DALFDJ020000015.1 tpg gene 6386 7282 . + . ID=gene-O5D79_002953;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=O5D79_002953 DALFDJ020000015.1 Protein Homology CDS 6386 7282 . + 0 ID=cds-HJH9164409.1;Parent=gene-O5D79_002953;Dbxref=NCBI_GP:HJH9164409.1;Name=HJH9164409.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461960.1;locus_tag=O5D79_002953;product=site-specific tyrosine recombinase XerD;protein_id=HJH9164409.1;transl_table=11 DALFDJ020000015.1 tpg gene 7306 8019 . + . ID=gene-O5D79_002954;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=O5D79_002954 DALFDJ020000015.1 Protein Homology CDS 7306 8019 . + 0 ID=cds-HJH9164410.1;Parent=gene-O5D79_002954;Dbxref=NCBI_GP:HJH9164410.1;Name=HJH9164410.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461959.1;locus_tag=O5D79_002954;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=HJH9164410.1;transl_table=11 DALFDJ020000015.1 tpg gene 8025 9758 . + . ID=gene-O5D79_002955;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=O5D79_002955 DALFDJ020000015.1 Protein Homology CDS 8025 9758 . + 0 ID=cds-HJH9164411.1;Parent=gene-O5D79_002955;Dbxref=NCBI_GP:HJH9164411.1;Name=HJH9164411.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461958.1;locus_tag=O5D79_002955;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=HJH9164411.1;transl_table=11 DALFDJ020000015.1 tpg gene 9863 10961 . + . ID=gene-O5D79_002956;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=O5D79_002956 DALFDJ020000015.1 Protein Homology CDS 9863 9937 . + 0 ID=cds-HJH9164412.1;Parent=gene-O5D79_002956;Dbxref=NCBI_GP:HJH9164412.1;Name=HJH9164412.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=O5D79_002956;product=peptide chain release factor 2;protein_id=HJH9164412.1;transl_table=11 DALFDJ020000015.1 Protein Homology CDS 9939 10961 . + 0 ID=cds-HJH9164412.1;Parent=gene-O5D79_002956;Dbxref=NCBI_GP:HJH9164412.1;Name=HJH9164412.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=O5D79_002956;product=peptide chain release factor 2;protein_id=HJH9164412.1;transl_table=11 DALFDJ020000015.1 tpg gene 10971 12488 . + . ID=gene-O5D79_002957;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=O5D79_002957 DALFDJ020000015.1 Protein Homology CDS 10971 12488 . + 0 ID=cds-HJH9164413.1;Parent=gene-O5D79_002957;Dbxref=NCBI_GP:HJH9164413.1;Name=HJH9164413.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=O5D79_002957;product=lysine--tRNA ligase;protein_id=HJH9164413.1;transl_table=11 DALFDJ020000015.1 tpg gene 12564 13109 . - . ID=gene-O5D79_002958;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=O5D79_002958 DALFDJ020000015.1 Protein Homology CDS 12564 13109 . - 0 ID=cds-HJH9164414.1;Parent=gene-O5D79_002958;Dbxref=NCBI_GP:HJH9164414.1;Name=HJH9164414.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461955.1;locus_tag=O5D79_002958;product=isopentenyl-diphosphate Delta-isomerase;protein_id=HJH9164414.1;transl_table=11 DALFDJ020000015.1 tpg gene 13374 14132 . + . ID=gene-O5D79_002959;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=O5D79_002959 DALFDJ020000015.1 Protein Homology CDS 13374 14132 . + 0 ID=cds-HJH9164415.1;Parent=gene-O5D79_002959;Dbxref=NCBI_GP:HJH9164415.1;Name=HJH9164415.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461954.1;locus_tag=O5D79_002959;product=amidase activator ActS;protein_id=HJH9164415.1;transl_table=11 DALFDJ020000015.1 tpg gene 14212 14285 . + . ID=gene-O5D79_002960;Name=O5D79_002960;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_002960 DALFDJ020000015.1 tRNAscan-SE tRNA 14212 14285 . + . ID=rna-O5D79_002960;Parent=gene-O5D79_002960;anticodon=(pos:14244..14246);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002960;product=tRNA-Gly DALFDJ020000015.1 tRNAscan-SE exon 14212 14285 . + . ID=exon-O5D79_002960-1;Parent=rna-O5D79_002960;anticodon=(pos:14244..14246);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_002960;product=tRNA-Gly DALFDJ020000015.1 tpg gene 14417 15223 . - . ID=gene-O5D79_002961;Name=O5D79_002961;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002961 DALFDJ020000015.1 Protein Homology CDS 14417 15223 . - 0 ID=cds-HJH9164416.1;Parent=gene-O5D79_002961;Dbxref=NCBI_GP:HJH9164416.1;Name=HJH9164416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461953.1;locus_tag=O5D79_002961;product=DUF1460 domain-containing protein;protein_id=HJH9164416.1;transl_table=11 DALFDJ020000015.1 tpg gene 15498 15749 . - . ID=gene-O5D79_002962;Name=O5D79_002962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002962 DALFDJ020000015.1 Protein Homology CDS 15498 15749 . - 0 ID=cds-HJH9164417.1;Parent=gene-O5D79_002962;Dbxref=NCBI_GP:HJH9164417.1;Name=HJH9164417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449411.1;locus_tag=O5D79_002962;product=hypothetical protein;protein_id=HJH9164417.1;transl_table=11 DALFDJ020000015.1 tpg gene 16177 16713 . + . ID=gene-O5D79_002963;Name=O5D79_002963;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002963 DALFDJ020000015.1 Protein Homology CDS 16177 16713 . + 0 ID=cds-HJH9164418.1;Parent=gene-O5D79_002963;Dbxref=NCBI_GP:HJH9164418.1;Name=HJH9164418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461948.1;locus_tag=O5D79_002963;product=STM3031 family outer membrane protein;protein_id=HJH9164418.1;transl_table=11 DALFDJ020000015.1 tpg gene 16760 17392 . + . ID=gene-O5D79_002964;Name=O5D79_002964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002964 DALFDJ020000015.1 Protein Homology CDS 16760 17392 . + 0 ID=cds-HJH9164419.1;Parent=gene-O5D79_002964;Dbxref=NCBI_GP:HJH9164419.1;Name=HJH9164419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461947.1;locus_tag=O5D79_002964;product=YfdX family protein;protein_id=HJH9164419.1;transl_table=11 DALFDJ020000015.1 tpg gene 18111 18692 . + . ID=gene-O5D79_002965;Name=O5D79_002965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002965 DALFDJ020000015.1 Protein Homology CDS 18111 18692 . + 0 ID=cds-HJH9164420.1;Parent=gene-O5D79_002965;Dbxref=NCBI_GP:HJH9164420.1;Name=HJH9164420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406296.1;locus_tag=O5D79_002965;product=fimbrial protein;protein_id=HJH9164420.1;transl_table=11 DALFDJ020000015.1 tpg gene 18812 21301 . + . ID=gene-O5D79_002966;Name=stdB;gbkey=Gene;gene=stdB;gene_biotype=protein_coding;locus_tag=O5D79_002966 DALFDJ020000015.1 Protein Homology CDS 18812 21301 . + 0 ID=cds-HJH9164421.1;Parent=gene-O5D79_002966;Dbxref=NCBI_GP:HJH9164421.1;Name=HJH9164421.1;gbkey=CDS;gene=stdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461945.1;locus_tag=O5D79_002966;product=fimbrial outer membrane usher protein StdB;protein_id=HJH9164421.1;transl_table=11 DALFDJ020000015.1 tpg gene 21342 22085 . + . ID=gene-O5D79_002967;Name=stdC;gbkey=Gene;gene=stdC;gene_biotype=protein_coding;locus_tag=O5D79_002967 DALFDJ020000015.1 Protein Homology CDS 21342 22085 . + 0 ID=cds-HJH9164422.1;Parent=gene-O5D79_002967;Dbxref=NCBI_GP:HJH9164422.1;Name=HJH9164422.1;gbkey=CDS;gene=stdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461944.1;locus_tag=O5D79_002967;product=fimbrial biogenesis chaperone StdC;protein_id=HJH9164422.1;transl_table=11 DALFDJ020000015.1 tpg gene 22082 23149 . + . ID=gene-O5D79_002968;Name=O5D79_002968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002968 DALFDJ020000015.1 Protein Homology CDS 22082 23149 . + 0 ID=cds-HJH9164423.1;Parent=gene-O5D79_002968;Dbxref=NCBI_GP:HJH9164423.1;Name=HJH9164423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147761.1;locus_tag=O5D79_002968;product=fimbrial protein;protein_id=HJH9164423.1;transl_table=11 DALFDJ020000015.1 tpg gene 23259 23765 . + . ID=gene-O5D79_002969;Name=O5D79_002969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002969 DALFDJ020000015.1 Protein Homology CDS 23259 23765 . + 0 ID=cds-HJH9164424.1;Parent=gene-O5D79_002969;Dbxref=NCBI_GP:HJH9164424.1;Name=HJH9164424.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006777639.1;locus_tag=O5D79_002969;product=CaiF/GrlA family transcriptional regulator;protein_id=HJH9164424.1;transl_table=11 DALFDJ020000015.1 tpg gene 23752 24510 . + . ID=gene-O5D79_002970;Name=O5D79_002970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002970 DALFDJ020000015.1 Protein Homology CDS 23752 24510 . + 0 ID=cds-HJH9164425.1;Parent=gene-O5D79_002970;Dbxref=NCBI_GP:HJH9164425.1;Name=HJH9164425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461942.1;locus_tag=O5D79_002970;product=transcriptional regulator;protein_id=HJH9164425.1;transl_table=11 DALFDJ020000015.1 tpg gene 24720 25538 . - . ID=gene-O5D79_002971;Name=O5D79_002971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002971 DALFDJ020000015.1 Protein Homology CDS 24720 25538 . - 0 ID=cds-HJH9164426.1;Parent=gene-O5D79_002971;Dbxref=NCBI_GP:HJH9164426.1;Name=HJH9164426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461941.1;locus_tag=O5D79_002971;product=nickel/cobalt efflux protein RcnA;protein_id=HJH9164426.1;transl_table=11 DALFDJ020000015.1 tpg gene 25660 25932 . + . ID=gene-O5D79_002972;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=O5D79_002972 DALFDJ020000015.1 Protein Homology CDS 25660 25932 . + 0 ID=cds-HJH9164427.1;Parent=gene-O5D79_002972;Dbxref=NCBI_GP:HJH9164427.1;Name=HJH9164427.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461940.1;locus_tag=O5D79_002972;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=HJH9164427.1;transl_table=11 DALFDJ020000015.1 tpg gene 25963 27192 . - . ID=gene-O5D79_002973;Name=O5D79_002973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002973 DALFDJ020000015.1 Protein Homology CDS 25963 27192 . - 0 ID=cds-HJH9164428.1;Parent=gene-O5D79_002973;Dbxref=NCBI_GP:HJH9164428.1;Name=HJH9164428.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461939.1;locus_tag=O5D79_002973;product=amino acid permease;protein_id=HJH9164428.1;transl_table=11 DALFDJ020000015.1 tpg gene 27334 27789 . - . ID=gene-O5D79_002974;Name=O5D79_002974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002974 DALFDJ020000015.1 Protein Homology CDS 27334 27789 . - 0 ID=cds-HJH9164429.1;Parent=gene-O5D79_002974;Dbxref=NCBI_GP:HJH9164429.1;Name=HJH9164429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465480.1;locus_tag=O5D79_002974;product=multidrug/biocide efflux PACE transporter;protein_id=HJH9164429.1;transl_table=11 DALFDJ020000015.1 tpg gene 27893 28756 . + . ID=gene-O5D79_002975;Name=O5D79_002975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002975 DALFDJ020000015.1 Protein Homology CDS 27893 28756 . + 0 ID=cds-HJH9164430.1;Parent=gene-O5D79_002975;Dbxref=NCBI_GP:HJH9164430.1;Name=HJH9164430.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461937.1;locus_tag=O5D79_002975;product=LysR family transcriptional regulator;protein_id=HJH9164430.1;transl_table=11 DALFDJ020000015.1 tpg gene 28879 30057 . + . ID=gene-O5D79_002976;Name=O5D79_002976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002976 DALFDJ020000015.1 Protein Homology CDS 28879 30057 . + 0 ID=cds-HJH9164431.1;Parent=gene-O5D79_002976;Dbxref=NCBI_GP:HJH9164431.1;Name=HJH9164431.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461936.1;locus_tag=O5D79_002976;product=acetyl-CoA C-acetyltransferase;protein_id=HJH9164431.1;transl_table=11 DALFDJ020000015.1 tpg gene 30487 31323 . + . ID=gene-O5D79_002977;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=O5D79_002977 DALFDJ020000015.1 Protein Homology CDS 30487 31323 . + 0 ID=cds-HJH9164432.1;Parent=gene-O5D79_002977;Dbxref=NCBI_GP:HJH9164432.1;Name=HJH9164432.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461935.1;locus_tag=O5D79_002977;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=HJH9164432.1;transl_table=11 DALFDJ020000015.1 tpg gene 31380 32141 . + . ID=gene-O5D79_002978;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=O5D79_002978 DALFDJ020000015.1 Protein Homology CDS 31380 32141 . + 0 ID=cds-HJH9164433.1;Parent=gene-O5D79_002978;Dbxref=NCBI_GP:HJH9164433.1;Name=HJH9164433.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461934.1;locus_tag=O5D79_002978;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=HJH9164433.1;transl_table=11 DALFDJ020000015.1 tpg gene 32495 33913 . + . ID=gene-O5D79_002979;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=O5D79_002979 DALFDJ020000015.1 Protein Homology CDS 32495 33913 . + 0 ID=cds-HJH9164434.1;Parent=gene-O5D79_002979;Dbxref=NCBI_GP:HJH9164434.1;Name=HJH9164434.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=O5D79_002979;product=arabinose-proton symporter AraE;protein_id=HJH9164434.1;transl_table=11 DALFDJ020000015.1 tpg gene 34026 34733 . + . ID=gene-O5D79_002980;Name=O5D79_002980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002980 DALFDJ020000015.1 Protein Homology CDS 34026 34733 . + 0 ID=cds-HJH9164435.1;Parent=gene-O5D79_002980;Dbxref=NCBI_GP:HJH9164435.1;Name=HJH9164435.1;Ontology_term=GO:0008152,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461932.1;locus_tag=O5D79_002980;product=aspartate/glutamate racemase;protein_id=HJH9164435.1;transl_table=11 DALFDJ020000015.1 tpg gene 34705 35640 . - . ID=gene-O5D79_002981;Name=O5D79_002981;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002981 DALFDJ020000015.1 Protein Homology CDS 34705 35640 . - 0 ID=cds-HJH9164436.1;Parent=gene-O5D79_002981;Dbxref=NCBI_GP:HJH9164436.1;Name=HJH9164436.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461931.1;locus_tag=O5D79_002981;product=LysR family transcriptional regulator;protein_id=HJH9164436.1;transl_table=11 DALFDJ020000015.1 tpg gene 35758 37020 . + . ID=gene-O5D79_002982;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=O5D79_002982 DALFDJ020000015.1 Protein Homology CDS 35758 37020 . + 0 ID=cds-HJH9164437.1;Parent=gene-O5D79_002982;Dbxref=NCBI_GP:HJH9164437.1;Name=HJH9164437.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461930.1;locus_tag=O5D79_002982;product=diaminopimelate decarboxylase;protein_id=HJH9164437.1;transl_table=11 DALFDJ020000015.1 tpg gene 37030 38052 . - . ID=gene-O5D79_002983;Name=O5D79_002983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002983 DALFDJ020000015.1 Protein Homology CDS 37030 38052 . - 0 ID=cds-HJH9164438.1;Parent=gene-O5D79_002983;Dbxref=NCBI_GP:HJH9164438.1;Name=HJH9164438.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461929.1;locus_tag=O5D79_002983;product=LacI family DNA-binding transcriptional regulator;protein_id=HJH9164438.1;transl_table=11 DALFDJ020000015.1 tpg gene 38063 39091 . - . ID=gene-O5D79_002984;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=O5D79_002984 DALFDJ020000015.1 Protein Homology CDS 38063 39091 . - 0 ID=cds-HJH9164439.1;Parent=gene-O5D79_002984;Dbxref=NCBI_GP:HJH9164439.1;Name=HJH9164439.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461928.1;locus_tag=O5D79_002984;product=HTH-type transcriptional regulator GalR;protein_id=HJH9164439.1;transl_table=11 DALFDJ020000015.1 tpg gene 39299 39526 . + . ID=gene-O5D79_002985;Name=O5D79_002985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002985 DALFDJ020000015.1 GeneMarkS-2+ CDS 39299 39526 . + 0 ID=cds-HJH9164440.1;Parent=gene-O5D79_002985;Dbxref=NCBI_GP:HJH9164440.1;Name=HJH9164440.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_002985;product=hypothetical protein;protein_id=HJH9164440.1;transl_table=11 DALFDJ020000015.1 tpg gene 39683 41842 . + . ID=gene-O5D79_002986;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=O5D79_002986 DALFDJ020000015.1 Protein Homology CDS 39683 41842 . + 0 ID=cds-HJH9164441.1;Parent=gene-O5D79_002986;Dbxref=NCBI_GP:HJH9164441.1;Name=HJH9164441.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461927.1;locus_tag=O5D79_002986;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=HJH9164441.1;transl_table=11 DALFDJ020000015.1 tpg gene 41835 43037 . + . ID=gene-O5D79_002987;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=O5D79_002987 DALFDJ020000015.1 Protein Homology CDS 41835 43037 . + 0 ID=cds-HJH9164442.1;Parent=gene-O5D79_002987;Dbxref=NCBI_GP:HJH9164442.1;Name=HJH9164442.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461926.1;locus_tag=O5D79_002987;product=lysophospholipid transporter LplT;protein_id=HJH9164442.1;transl_table=11 DALFDJ020000015.1 tpg gene 43124 44164 . - . ID=gene-O5D79_002988;Name=O5D79_002988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002988 DALFDJ020000015.1 Protein Homology CDS 43124 44164 . - 0 ID=cds-HJH9164443.1;Parent=gene-O5D79_002988;Dbxref=NCBI_GP:HJH9164443.1;Name=HJH9164443.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461925.1;locus_tag=O5D79_002988;product=NADP(H)-dependent aldo-keto reductase;protein_id=HJH9164443.1;transl_table=11 DALFDJ020000015.1 tpg gene 44355 44573 . - . ID=gene-O5D79_002989;Name=O5D79_002989;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002989 DALFDJ020000015.1 Protein Homology CDS 44355 44573 . - 0 ID=cds-HJH9164444.1;Parent=gene-O5D79_002989;Dbxref=NCBI_GP:HJH9164444.1;Name=HJH9164444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461924.1;locus_tag=O5D79_002989;product=YgdI/YgdR family lipoprotein;protein_id=HJH9164444.1;transl_table=11 DALFDJ020000015.1 tpg gene 44743 45456 . - . ID=gene-O5D79_002990;Name=O5D79_002990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002990 DALFDJ020000015.1 Protein Homology CDS 44743 45456 . - 0 ID=cds-HJH9164445.1;Parent=gene-O5D79_002990;Dbxref=NCBI_GP:HJH9164445.1;Name=HJH9164445.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461923.1;locus_tag=O5D79_002990;product=TerC family protein;protein_id=HJH9164445.1;transl_table=11 DALFDJ020000015.1 tpg gene 45638 46333 . - . ID=gene-O5D79_002991;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=O5D79_002991 DALFDJ020000015.1 Protein Homology CDS 45638 46333 . - 0 ID=cds-HJH9164446.1;Parent=gene-O5D79_002991;Dbxref=NCBI_GP:HJH9164446.1;Name=HJH9164446.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461922.1;locus_tag=O5D79_002991;product=DNA mismatch repair endonuclease MutH;protein_id=HJH9164446.1;transl_table=11 DALFDJ020000015.1 tpg gene 47016 47546 . + . ID=gene-O5D79_002992;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=O5D79_002992 DALFDJ020000015.1 Protein Homology CDS 47016 47546 . + 0 ID=cds-HJH9164447.1;Parent=gene-O5D79_002992;Dbxref=NCBI_GP:HJH9164447.1;Name=HJH9164447.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=O5D79_002992;product=RNA pyrophosphohydrolase;protein_id=HJH9164447.1;transl_table=11 DALFDJ020000015.1 tpg gene 47559 49805 . + . ID=gene-O5D79_002993;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=O5D79_002993 DALFDJ020000015.1 Protein Homology CDS 47559 49805 . + 0 ID=cds-HJH9164448.1;Parent=gene-O5D79_002993;Dbxref=NCBI_GP:HJH9164448.1;Name=HJH9164448.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461920.1;locus_tag=O5D79_002993;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=HJH9164448.1;transl_table=11 DALFDJ020000015.1 tpg gene 50021 50896 . + . ID=gene-O5D79_002994;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=O5D79_002994 DALFDJ020000015.1 Protein Homology CDS 50021 50896 . + 0 ID=cds-HJH9164449.1;Parent=gene-O5D79_002994;Dbxref=NCBI_GP:HJH9164449.1;Name=HJH9164449.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461919.1;locus_tag=O5D79_002994;product=prolipoprotein diacylglyceryl transferase;protein_id=HJH9164449.1;transl_table=11 DALFDJ020000015.1 tpg gene 50903 51697 . + . ID=gene-O5D79_002995;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=O5D79_002995 DALFDJ020000015.1 Protein Homology CDS 50903 51697 . + 0 ID=cds-HJH9164450.1;Parent=gene-O5D79_002995;Dbxref=NCBI_GP:HJH9164450.1;Name=HJH9164450.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=O5D79_002995;product=thymidylate synthase;protein_id=HJH9164450.1;transl_table=11 DALFDJ020000015.1 tpg gene 51882 52352 . + . ID=gene-O5D79_002996;Name=O5D79_002996;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002996 DALFDJ020000015.1 Protein Homology CDS 51882 52352 . + 0 ID=cds-HJH9164451.1;Parent=gene-O5D79_002996;Dbxref=NCBI_GP:HJH9164451.1;Name=HJH9164451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077605.1;locus_tag=O5D79_002996;product=prepilin peptidase-dependent protein;protein_id=HJH9164451.1;transl_table=11 DALFDJ020000015.1 tpg gene 52343 52906 . + . ID=gene-O5D79_002997;Name=O5D79_002997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002997 DALFDJ020000015.1 Protein Homology CDS 52343 52906 . + 0 ID=cds-HJH9164452.1;Parent=gene-O5D79_002997;Dbxref=NCBI_GP:HJH9164452.1;Name=HJH9164452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461916.1;locus_tag=O5D79_002997;product=prepilin peptidase-dependent protein;protein_id=HJH9164452.1;transl_table=11 DALFDJ020000015.1 tpg gene 52903 53310 . + . ID=gene-O5D79_002998;Name=O5D79_002998;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002998 DALFDJ020000015.1 Protein Homology CDS 52903 53310 . + 0 ID=cds-HJH9164453.1;Parent=gene-O5D79_002998;Dbxref=NCBI_GP:HJH9164453.1;Name=HJH9164453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461915.1;locus_tag=O5D79_002998;product=DUF2509 family protein;protein_id=HJH9164453.1;transl_table=11 DALFDJ020000015.1 tpg gene 53295 53615 . + . ID=gene-O5D79_002999;Name=O5D79_002999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_002999 DALFDJ020000015.1 Protein Homology CDS 53295 53615 . + 0 ID=cds-HJH9164454.1;Parent=gene-O5D79_002999;Dbxref=NCBI_GP:HJH9164454.1;Name=HJH9164454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461914.1;locus_tag=O5D79_002999;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=HJH9164454.1;transl_table=11 DALFDJ020000015.1 tpg gene 53631 57002 . + . ID=gene-O5D79_003000;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=O5D79_003000 DALFDJ020000015.1 Protein Homology CDS 53631 57002 . + 0 ID=cds-HJH9164455.1;Parent=gene-O5D79_003000;Dbxref=NCBI_GP:HJH9164455.1;Name=HJH9164455.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461913.2;locus_tag=O5D79_003000;product=exodeoxyribonuclease V subunit gamma;protein_id=HJH9164455.1;transl_table=11 DALFDJ020000015.1 tpg gene 57180 60068 . + . ID=gene-O5D79_003001;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=O5D79_003001 DALFDJ020000015.1 Protein Homology CDS 57180 60068 . + 0 ID=cds-HJH9164456.1;Parent=gene-O5D79_003001;Dbxref=NCBI_GP:HJH9164456.1;Name=HJH9164456.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461912.1;locus_tag=O5D79_003001;product=pitrilysin;protein_id=HJH9164456.1;transl_table=11 DALFDJ020000015.1 tpg gene 60061 63606 . + . ID=gene-O5D79_003002;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=O5D79_003002 DALFDJ020000015.1 Protein Homology CDS 60061 63606 . + 0 ID=cds-HJH9164457.1;Parent=gene-O5D79_003002;Dbxref=NCBI_GP:HJH9164457.1;Name=HJH9164457.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461911.1;locus_tag=O5D79_003002;product=exodeoxyribonuclease V subunit beta;protein_id=HJH9164457.1;transl_table=11 DALFDJ020000015.1 tpg gene 63603 65438 . + . ID=gene-O5D79_003003;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=O5D79_003003 DALFDJ020000015.1 Protein Homology CDS 63603 65438 . + 0 ID=cds-HJH9164458.1;Parent=gene-O5D79_003003;Dbxref=NCBI_GP:HJH9164458.1;Name=HJH9164458.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461910.1;locus_tag=O5D79_003003;product=exodeoxyribonuclease V subunit alpha;protein_id=HJH9164458.1;transl_table=11 DALFDJ020000015.1 tpg gene 65541 66872 . - . ID=gene-O5D79_003004;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=O5D79_003004 DALFDJ020000015.1 Protein Homology CDS 65541 66872 . - 0 ID=cds-HJH9164459.1;Parent=gene-O5D79_003004;Dbxref=NCBI_GP:HJH9164459.1;Name=HJH9164459.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461909.1;locus_tag=O5D79_003004;product=amino-acid N-acetyltransferase;protein_id=HJH9164459.1;transl_table=11 DALFDJ020000015.1 tpg gene 67105 68358 . + . ID=gene-O5D79_003005;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=O5D79_003005 DALFDJ020000015.1 Protein Homology CDS 67105 68358 . + 0 ID=cds-HJH9164460.1;Parent=gene-O5D79_003005;Dbxref=NCBI_GP:HJH9164460.1;Name=HJH9164460.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461908.1;locus_tag=O5D79_003005;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=HJH9164460.1;transl_table=11 DALFDJ020000015.1 tpg gene 68468 68544 . - . ID=gene-O5D79_003006;Name=O5D79_003006;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_003006 DALFDJ020000015.1 tRNAscan-SE tRNA 68468 68544 . - . ID=rna-O5D79_003006;Parent=gene-O5D79_003006;anticodon=(pos:complement(68508..68510));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003006;product=tRNA-Met DALFDJ020000015.1 tRNAscan-SE exon 68468 68544 . - . ID=exon-O5D79_003006-1;Parent=rna-O5D79_003006;anticodon=(pos:complement(68508..68510));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003006;product=tRNA-Met DALFDJ020000015.1 tpg gene 68574 68650 . - . ID=gene-O5D79_003007;Name=O5D79_003007;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_003007 DALFDJ020000015.1 tRNAscan-SE tRNA 68574 68650 . - . ID=rna-O5D79_003007;Parent=gene-O5D79_003007;anticodon=(pos:complement(68614..68616));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003007;product=tRNA-Met DALFDJ020000015.1 tRNAscan-SE exon 68574 68650 . - . ID=exon-O5D79_003007-1;Parent=rna-O5D79_003007;anticodon=(pos:complement(68614..68616));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003007;product=tRNA-Met DALFDJ020000015.1 tpg gene 68858 69955 . + . ID=gene-O5D79_003008;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=O5D79_003008 DALFDJ020000015.1 Protein Homology CDS 68858 69955 . + 0 ID=cds-HJH9164461.1;Parent=gene-O5D79_003008;Dbxref=NCBI_GP:HJH9164461.1;Name=HJH9164461.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=O5D79_003008;product=murein transglycosylase A;protein_id=HJH9164461.1;transl_table=11 DALFDJ020000015.1 tpg gene 70065 70871 . + . ID=gene-O5D79_003009;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=O5D79_003009 DALFDJ020000015.1 Protein Homology CDS 70065 70871 . + 0 ID=cds-HJH9164462.1;Parent=gene-O5D79_003009;Dbxref=NCBI_GP:HJH9164462.1;Name=HJH9164462.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461906.1;locus_tag=O5D79_003009;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=HJH9164462.1;transl_table=11 DALFDJ020000015.1 tpg gene 70923 71810 . - . ID=gene-O5D79_003010;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=O5D79_003010 DALFDJ020000015.1 Protein Homology CDS 70923 71810 . - 0 ID=cds-HJH9164463.1;Parent=gene-O5D79_003010;Dbxref=NCBI_GP:HJH9164463.1;Name=HJH9164463.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461905.3;locus_tag=O5D79_003010;product=EamA family transporter RarD;protein_id=HJH9164463.1;transl_table=11 DALFDJ020000015.1 tpg gene 72110 72553 . - . ID=gene-O5D79_003011;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=O5D79_003011 DALFDJ020000015.1 Protein Homology CDS 72110 72553 . - 0 ID=cds-HJH9164464.1;Parent=gene-O5D79_003011;Dbxref=NCBI_GP:HJH9164464.1;Name=HJH9164464.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461904.1;locus_tag=O5D79_003011;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=HJH9164464.1;transl_table=11 DALFDJ020000015.1 tpg gene 72553 73758 . - . ID=gene-O5D79_003012;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=O5D79_003012 DALFDJ020000015.1 Protein Homology CDS 72553 73758 . - 0 ID=cds-HJH9164465.1;Parent=gene-O5D79_003012;Dbxref=NCBI_GP:HJH9164465.1;Name=HJH9164465.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461903.1;locus_tag=O5D79_003012;product=cysteine desulfurase CsdA;protein_id=HJH9164465.1;transl_table=11 DALFDJ020000015.1 tpg gene 73951 74178 . + . ID=gene-O5D79_003013;Name=O5D79_003013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003013 DALFDJ020000015.1 Protein Homology CDS 73951 74178 . + 0 ID=cds-HJH9164466.1;Parent=gene-O5D79_003013;Dbxref=NCBI_GP:HJH9164466.1;Name=HJH9164466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461902.1;locus_tag=O5D79_003013;product=YgdI/YgdR family lipoprotein;protein_id=HJH9164466.1;transl_table=11 DALFDJ020000015.1 tpg gene 74525 75442 . + . ID=gene-O5D79_003014;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=O5D79_003014 DALFDJ020000015.1 Protein Homology CDS 74525 75442 . + 0 ID=cds-HJH9164467.1;Parent=gene-O5D79_003014;Dbxref=NCBI_GP:HJH9164467.1;Name=HJH9164467.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=O5D79_003014;product=glycine cleavage system transcriptional regulator GcvA;protein_id=HJH9164467.1;transl_table=11 DALFDJ020000015.1 tpg gene 75461 75856 . + . ID=gene-O5D79_003015;Name=O5D79_003015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003015 DALFDJ020000015.1 Protein Homology CDS 75461 75856 . + 0 ID=cds-HJH9164468.1;Parent=gene-O5D79_003015;Dbxref=NCBI_GP:HJH9164468.1;Name=HJH9164468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461900.1;locus_tag=O5D79_003015;product=DUF423 domain-containing protein;protein_id=HJH9164468.1;transl_table=11 DALFDJ020000015.1 tpg gene 75849 76949 . + . ID=gene-O5D79_003016;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=O5D79_003016 DALFDJ020000015.1 Protein Homology CDS 75849 76949 . + 0 ID=cds-HJH9164469.1;Parent=gene-O5D79_003016;Dbxref=NCBI_GP:HJH9164469.1;Name=HJH9164469.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=O5D79_003016;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=HJH9164469.1;transl_table=11 DALFDJ020000015.1 tpg gene 77008 77718 . - . ID=gene-O5D79_003017;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=O5D79_003017 DALFDJ020000015.1 Protein Homology CDS 77008 77718 . - 0 ID=cds-HJH9164470.1;Parent=gene-O5D79_003017;Dbxref=NCBI_GP:HJH9164470.1;Name=HJH9164470.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461898.1;locus_tag=O5D79_003017;product=L-fucose operon activator;protein_id=HJH9164470.1;transl_table=11 DALFDJ020000015.1 tpg gene 77776 78198 . - . ID=gene-O5D79_003018;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=O5D79_003018 DALFDJ020000015.1 Protein Homology CDS 77776 78198 . - 0 ID=cds-HJH9164471.1;Parent=gene-O5D79_003018;Dbxref=NCBI_GP:HJH9164471.1;Name=HJH9164471.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461897.1;locus_tag=O5D79_003018;product=L-fucose mutarotase;protein_id=HJH9164471.1;transl_table=11 DALFDJ020000015.1 tpg gene 78200 79618 . - . ID=gene-O5D79_003019;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=O5D79_003019 DALFDJ020000015.1 Protein Homology CDS 78200 79618 . - 0 ID=cds-HJH9164472.1;Parent=gene-O5D79_003019;Dbxref=NCBI_GP:HJH9164472.1;Name=HJH9164472.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461896.1;locus_tag=O5D79_003019;product=L-fuculokinase;protein_id=HJH9164472.1;transl_table=11 DALFDJ020000015.1 tpg gene 79719 81494 . - . ID=gene-O5D79_003020;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=O5D79_003020 DALFDJ020000015.1 Protein Homology CDS 79719 81494 . - 0 ID=cds-HJH9164473.1;Parent=gene-O5D79_003020;Dbxref=NCBI_GP:HJH9164473.1;Name=HJH9164473.1;Ontology_term=GO:0019317,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461895.1;locus_tag=O5D79_003020;product=L-fucose isomerase;protein_id=HJH9164473.1;transl_table=11 DALFDJ020000015.1 tpg gene 81526 82842 . - . ID=gene-O5D79_003021;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=O5D79_003021 DALFDJ020000015.1 Protein Homology CDS 81526 82842 . - 0 ID=cds-HJH9164474.1;Parent=gene-O5D79_003021;Dbxref=NCBI_GP:HJH9164474.1;Name=HJH9164474.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=O5D79_003021;product=L-fucose:H+ symporter permease;protein_id=HJH9164474.1;transl_table=11 DALFDJ020000015.1 tpg gene 83399 84046 . + . ID=gene-O5D79_003022;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=O5D79_003022 DALFDJ020000015.1 Protein Homology CDS 83399 84046 . + 0 ID=cds-HJH9164475.1;Parent=gene-O5D79_003022;Dbxref=NCBI_GP:HJH9164475.1;Name=HJH9164475.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461894.1;locus_tag=O5D79_003022;product=L-fuculose-phosphate aldolase;protein_id=HJH9164475.1;transl_table=11 DALFDJ020000015.1 tpg gene 84063 85211 . + . ID=gene-O5D79_003023;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=O5D79_003023 DALFDJ020000015.1 Protein Homology CDS 84063 85211 . + 0 ID=cds-HJH9164476.1;Parent=gene-O5D79_003023;Dbxref=NCBI_GP:HJH9164476.1;Name=HJH9164476.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461893.1;locus_tag=O5D79_003023;product=lactaldehyde reductase;protein_id=HJH9164476.1;transl_table=11 DALFDJ020000015.1 tpg gene 85303 86058 . - . ID=gene-O5D79_003024;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=O5D79_003024 DALFDJ020000015.1 Protein Homology CDS 85303 86058 . - 0 ID=cds-HJH9164477.1;Parent=gene-O5D79_003024;Dbxref=NCBI_GP:HJH9164477.1;Name=HJH9164477.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=O5D79_003024;product=flap endonuclease Xni;protein_id=HJH9164477.1;transl_table=11 DALFDJ020000015.1 tpg gene 86229 87596 . - . ID=gene-O5D79_003025;Name=O5D79_003025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003025 DALFDJ020000015.1 Protein Homology CDS 86229 87596 . - 0 ID=cds-HJH9164478.1;Parent=gene-O5D79_003025;Dbxref=NCBI_GP:HJH9164478.1;Name=HJH9164478.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=O5D79_003025;product=L-serine ammonia-lyase;protein_id=HJH9164478.1;transl_table=11 DALFDJ020000015.1 tpg gene 87655 88944 . - . ID=gene-O5D79_003026;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=O5D79_003026 DALFDJ020000015.1 Protein Homology CDS 87655 88944 . - 0 ID=cds-HJH9164479.1;Parent=gene-O5D79_003026;Dbxref=NCBI_GP:HJH9164479.1;Name=HJH9164479.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461890.1;locus_tag=O5D79_003026;product=HAAAP family serine/threonine permease SdaC;protein_id=HJH9164479.1;transl_table=11 DALFDJ020000015.1 tpg gene 89509 90873 . - . ID=gene-O5D79_003027;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=O5D79_003027 DALFDJ020000015.1 Protein Homology CDS 89509 90873 . - 0 ID=cds-HJH9164480.1;Parent=gene-O5D79_003027;Dbxref=NCBI_GP:HJH9164480.1;Name=HJH9164480.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=O5D79_003027;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=HJH9164480.1;transl_table=11 DALFDJ020000015.1 tpg gene 90987 91835 . - . ID=gene-O5D79_003028;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=O5D79_003028 DALFDJ020000015.1 Protein Homology CDS 90987 91835 . - 0 ID=cds-HJH9164481.1;Parent=gene-O5D79_003028;Dbxref=NCBI_GP:HJH9164481.1;Name=HJH9164481.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461888.1;locus_tag=O5D79_003028;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=HJH9164481.1;transl_table=11 DALFDJ020000015.1 tpg gene 91904 92449 . + . ID=gene-O5D79_003029;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=O5D79_003029 DALFDJ020000015.1 Protein Homology CDS 91904 92449 . + 0 ID=cds-HJH9164482.1;Parent=gene-O5D79_003029;Dbxref=NCBI_GP:HJH9164482.1;Name=HJH9164482.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461887.1;locus_tag=O5D79_003029;product=SecY-interacting protein;protein_id=HJH9164482.1;transl_table=11 DALFDJ020000015.1 tpg gene 93061 93390 . + . ID=gene-O5D79_003030;Name=O5D79_003030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003030 DALFDJ020000015.1 Protein Homology CDS 93061 93390 . + 0 ID=cds-HJH9164483.1;Parent=gene-O5D79_003030;Dbxref=NCBI_GP:HJH9164483.1;Name=HJH9164483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461886.1;locus_tag=O5D79_003030;product=YqcC family protein;protein_id=HJH9164483.1;transl_table=11 DALFDJ020000015.1 tpg gene 93390 94172 . + . ID=gene-O5D79_003031;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=O5D79_003031 DALFDJ020000015.1 Protein Homology CDS 93390 94172 . + 0 ID=cds-HJH9164484.1;Parent=gene-O5D79_003031;Dbxref=NCBI_GP:HJH9164484.1;Name=HJH9164484.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001715016.1;locus_tag=O5D79_003031;product=tRNA pseudouridine(65) synthase TruC;protein_id=HJH9164484.1;transl_table=11 DALFDJ020000015.1 tpg gene 94191 94640 . + . ID=gene-O5D79_003032;Name=O5D79_003032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003032 DALFDJ020000015.1 Protein Homology CDS 94191 94640 . + 0 ID=cds-HJH9164485.1;Parent=gene-O5D79_003032;Dbxref=NCBI_GP:HJH9164485.1;Name=HJH9164485.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461884.1;locus_tag=O5D79_003032;product=flavodoxin;protein_id=HJH9164485.1;transl_table=11 DALFDJ020000015.1 tpg gene 94790 95038 . - . ID=gene-O5D79_003033;Name=O5D79_003033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003033 DALFDJ020000015.1 GeneMarkS-2+ CDS 94790 95038 . - 0 ID=cds-HJH9164486.1;Parent=gene-O5D79_003033;Dbxref=NCBI_GP:HJH9164486.1;Name=HJH9164486.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_003033;product=hypothetical protein;protein_id=HJH9164486.1;transl_table=11 DALFDJ020000015.1 tpg gene 95121 96479 . + . ID=gene-O5D79_003034;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=O5D79_003034 DALFDJ020000015.1 Protein Homology CDS 95121 96479 . + 0 ID=cds-HJH9164487.1;Parent=gene-O5D79_003034;Dbxref=NCBI_GP:HJH9164487.1;Name=HJH9164487.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461883.1;locus_tag=O5D79_003034;product=galactarate/glucarate/glycerate transporter GudP;protein_id=HJH9164487.1;transl_table=11 DALFDJ020000015.1 tpg gene 96476 97816 . + . ID=gene-O5D79_003035;Name=O5D79_003035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003035 DALFDJ020000015.1 Protein Homology CDS 96476 97816 . + 0 ID=cds-HJH9164488.1;Parent=gene-O5D79_003035;Dbxref=NCBI_GP:HJH9164488.1;Name=HJH9164488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=O5D79_003035;product=enolase C-terminal domain-like protein;protein_id=HJH9164488.1;transl_table=11 DALFDJ020000015.1 tpg gene 97837 99177 . + . ID=gene-O5D79_003036;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=O5D79_003036 DALFDJ020000015.1 Protein Homology CDS 97837 99177 . + 0 ID=cds-HJH9164489.1;Parent=gene-O5D79_003036;Dbxref=NCBI_GP:HJH9164489.1;Name=HJH9164489.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=O5D79_003036;product=glucarate dehydratase;protein_id=HJH9164489.1;transl_table=11 DALFDJ020000015.1 tpg gene 99255 100397 . + . ID=gene-O5D79_003037;Name=O5D79_003037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003037 DALFDJ020000015.1 Protein Homology CDS 99255 100397 . + 0 ID=cds-HJH9164490.1;Parent=gene-O5D79_003037;Dbxref=NCBI_GP:HJH9164490.1;Name=HJH9164490.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461880.1;locus_tag=O5D79_003037;product=glycerate kinase;protein_id=HJH9164490.1;transl_table=11 DALFDJ020000015.1 tpg gene 100441 103197 . - . ID=gene-O5D79_003038;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=O5D79_003038 DALFDJ020000015.1 Protein Homology CDS 100441 103197 . - 0 ID=cds-HJH9164491.1;Parent=gene-O5D79_003038;Dbxref=NCBI_GP:HJH9164491.1;Name=HJH9164491.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461879.1;locus_tag=O5D79_003038;product=two-component sensor histidine kinase BarA;protein_id=HJH9164491.1;transl_table=11 DALFDJ020000015.1 tpg gene 103255 104550 . + . ID=gene-O5D79_003039;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=O5D79_003039 DALFDJ020000015.1 Protein Homology CDS 103255 104550 . + 0 ID=cds-HJH9164492.1;Parent=gene-O5D79_003039;Dbxref=NCBI_GP:HJH9164492.1;Name=HJH9164492.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461878.1;locus_tag=O5D79_003039;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=HJH9164492.1;transl_table=11 DALFDJ020000015.1 tpg gene 104602 106836 . + . ID=gene-O5D79_003040;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=O5D79_003040 DALFDJ020000015.1 Protein Homology CDS 104602 106836 . + 0 ID=cds-HJH9164493.1;Parent=gene-O5D79_003040;Dbxref=NCBI_GP:HJH9164493.1;Name=HJH9164493.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461877.1;locus_tag=O5D79_003040;product=GTP diphosphokinase;protein_id=HJH9164493.1;transl_table=11 DALFDJ020000015.1 tpg gene 106920 107276 . + . ID=gene-O5D79_003041;Name=O5D79_003041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003041 DALFDJ020000015.1 Protein Homology CDS 106920 107276 . + 0 ID=cds-HJH9164494.1;Parent=gene-O5D79_003041;Dbxref=NCBI_GP:HJH9164494.1;Name=HJH9164494.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461876.3;locus_tag=O5D79_003041;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=HJH9164494.1;transl_table=11 DALFDJ020000015.1 tpg gene 107242 107538 . + . ID=gene-O5D79_003042;Name=O5D79_003042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003042 DALFDJ020000015.1 Protein Homology CDS 107242 107538 . + 0 ID=cds-HJH9164495.1;Parent=gene-O5D79_003042;Dbxref=NCBI_GP:HJH9164495.1;Name=HJH9164495.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532579.1;locus_tag=O5D79_003042;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=HJH9164495.1;transl_table=11 DALFDJ020000015.1 tpg gene 107985 108977 . - . ID=gene-O5D79_003043;Name=O5D79_003043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003043 DALFDJ020000015.1 GeneMarkS-2+ CDS 107985 108977 . - 0 ID=cds-HJH9164496.1;Parent=gene-O5D79_003043;Dbxref=NCBI_GP:HJH9164496.1;Name=HJH9164496.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_003043;product=hypothetical protein;protein_id=HJH9164496.1;transl_table=11 DALFDJ020000015.1 tpg gene 109107 109643 . - . ID=gene-O5D79_003044;Name=O5D79_003044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003044 DALFDJ020000015.1 Protein Homology CDS 109107 109643 . - 0 ID=cds-HJH9164497.1;Parent=gene-O5D79_003044;Dbxref=NCBI_GP:HJH9164497.1;Name=HJH9164497.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001079648.1;locus_tag=O5D79_003044;product=fimbrial protein;protein_id=HJH9164497.1;transl_table=11 DALFDJ020000015.1 tpg gene 109640 110110 . - . ID=gene-O5D79_003045;Name=O5D79_003045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003045 DALFDJ020000015.1 Protein Homology CDS 109640 110110 . - 0 ID=cds-HJH9164498.1;Parent=gene-O5D79_003045;Dbxref=NCBI_GP:HJH9164498.1;Name=HJH9164498.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006667202.1;locus_tag=O5D79_003045;product=fimbrial protein;protein_id=HJH9164498.1;transl_table=11 DALFDJ020000015.1 tpg gene 110125 110631 . - . ID=gene-O5D79_003046;Name=O5D79_003046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003046 DALFDJ020000015.1 Protein Homology CDS 110125 110631 . - 0 ID=cds-HJH9164499.1;Parent=gene-O5D79_003046;Dbxref=NCBI_GP:HJH9164499.1;Name=HJH9164499.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178262.1;locus_tag=O5D79_003046;product=fimbrial protein;protein_id=HJH9164499.1;transl_table=11 DALFDJ020000015.1 tpg gene 110651 111424 . - . ID=gene-O5D79_003047;Name=O5D79_003047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003047 DALFDJ020000015.1 Protein Homology CDS 110651 111424 . - 0 ID=cds-HJH9164500.1;Parent=gene-O5D79_003047;Dbxref=NCBI_GP:HJH9164500.1;Name=HJH9164500.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044456.1;locus_tag=O5D79_003047;product=fimbria/pilus periplasmic chaperone;protein_id=HJH9164500.1;transl_table=11 DALFDJ020000015.1 tpg gene 111437 114133 . - . ID=gene-O5D79_003048;Name=O5D79_003048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003048 DALFDJ020000015.1 Protein Homology CDS 111437 114133 . - 0 ID=cds-HJH9164501.1;Parent=gene-O5D79_003048;Dbxref=NCBI_GP:HJH9164501.1;Name=HJH9164501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000981797.1;locus_tag=O5D79_003048;product=fimbrial biogenesis outer membrane usher protein;protein_id=HJH9164501.1;transl_table=11 DALFDJ020000015.1 tpg gene 114216 114803 . - . ID=gene-O5D79_003049;Name=O5D79_003049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003049 DALFDJ020000015.1 Protein Homology CDS 114216 114803 . - 0 ID=cds-HJH9164502.1;Parent=gene-O5D79_003049;Dbxref=NCBI_GP:HJH9164502.1;Name=HJH9164502.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466162.1;locus_tag=O5D79_003049;product=fimbrial protein;protein_id=HJH9164502.1;transl_table=11 DALFDJ020000015.1 tpg gene 115411 116211 . + . ID=gene-O5D79_003050;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=O5D79_003050 DALFDJ020000015.1 Protein Homology CDS 115411 116211 . + 0 ID=cds-HJH9164503.1;Parent=gene-O5D79_003050;Dbxref=NCBI_GP:HJH9164503.1;Name=HJH9164503.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461875.1;locus_tag=O5D79_003050;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=HJH9164503.1;transl_table=11 DALFDJ020000015.1 tpg gene 116439 118076 . + . ID=gene-O5D79_003051;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=O5D79_003051 DALFDJ020000015.1 Protein Homology CDS 116439 118076 . + 0 ID=cds-HJH9164504.1;Parent=gene-O5D79_003051;Dbxref=NCBI_GP:HJH9164504.1;Name=HJH9164504.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=O5D79_003051;product=glutamine hydrolyzing CTP synthase;protein_id=HJH9164504.1;transl_table=11 DALFDJ020000015.1 tpg gene 118159 119457 . + . ID=gene-O5D79_003052;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=O5D79_003052 DALFDJ020000015.1 Protein Homology CDS 118159 119457 . + 0 ID=cds-HJH9164505.1;Parent=gene-O5D79_003052;Dbxref=NCBI_GP:HJH9164505.1;Name=HJH9164505.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=O5D79_003052;product=phosphopyruvate hydratase;protein_id=HJH9164505.1;transl_table=11 DALFDJ020000015.1 tpg gene 119593 120264 . + . ID=gene-O5D79_003053;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=O5D79_003053 DALFDJ020000015.1 Protein Homology CDS 119593 120264 . + 0 ID=cds-HJH9164506.1;Parent=gene-O5D79_003053;Dbxref=NCBI_GP:HJH9164506.1;Name=HJH9164506.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=O5D79_003053;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=HJH9164506.1;transl_table=11 DALFDJ020000015.1 tpg gene 120748 121545 . + . ID=gene-O5D79_003054;Name=O5D79_003054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003054 DALFDJ020000015.1 Protein Homology CDS 120748 121545 . + 0 ID=cds-HJH9164507.1;Parent=gene-O5D79_003054;Dbxref=NCBI_GP:HJH9164507.1;Name=HJH9164507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461871.1;locus_tag=O5D79_003054;product=MBL fold metallo-hydrolase;protein_id=HJH9164507.1;transl_table=11 DALFDJ020000015.1 tpg gene 121633 121995 . - . ID=gene-O5D79_003055;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=O5D79_003055 DALFDJ020000015.1 Protein Homology CDS 121633 121995 . - 0 ID=cds-HJH9164508.1;Parent=gene-O5D79_003055;Dbxref=NCBI_GP:HJH9164508.1;Name=HJH9164508.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461870.1;locus_tag=O5D79_003055;product=6-carboxytetrahydropterin synthase QueD;protein_id=HJH9164508.1;transl_table=11 DALFDJ020000015.1 tpg gene 122418 124217 . + . ID=gene-O5D79_003056;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=O5D79_003056 DALFDJ020000015.1 Protein Homology CDS 122418 124217 . + 0 ID=cds-HJH9164509.1;Parent=gene-O5D79_003056;Dbxref=NCBI_GP:HJH9164509.1;Name=HJH9164509.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461869.1;locus_tag=O5D79_003056;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=HJH9164509.1;transl_table=11 DALFDJ020000015.1 tpg gene 124217 125929 . + . ID=gene-O5D79_003057;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=O5D79_003057 DALFDJ020000015.1 Protein Homology CDS 124217 125929 . + 0 ID=cds-HJH9164510.1;Parent=gene-O5D79_003057;Dbxref=NCBI_GP:HJH9164510.1;Name=HJH9164510.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=O5D79_003057;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=HJH9164510.1;transl_table=11 DALFDJ020000015.1 tpg gene 126005 126739 . + . ID=gene-O5D79_003058;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=O5D79_003058 DALFDJ020000015.1 Protein Homology CDS 126005 126739 . + 0 ID=cds-HJH9164511.1;Parent=gene-O5D79_003058;Dbxref=NCBI_GP:HJH9164511.1;Name=HJH9164511.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461867.1;locus_tag=O5D79_003058;product=phosphoadenosine phosphosulfate reductase;protein_id=HJH9164511.1;transl_table=11 DALFDJ020000015.1 tpg gene 126827 127780 . - . ID=gene-O5D79_003059;Name=sopD;gbkey=Gene;gene=sopD;gene_biotype=protein_coding;locus_tag=O5D79_003059 DALFDJ020000015.1 Protein Homology CDS 126827 127780 . - 0 ID=cds-HJH9164512.1;Parent=gene-O5D79_003059;Dbxref=NCBI_GP:HJH9164512.1;Name=HJH9164512.1;gbkey=CDS;gene=sopD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461866.1;locus_tag=O5D79_003059;product=SPI-1 type III secretion system effector SopD;protein_id=HJH9164512.1;transl_table=11 ##sequence-region DALFDJ020000016.1 1 114779 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000016.1 tpg region 1 114779 . + . ID=DALFDJ020000016.1:1..114779;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000016.1 tpg gene 1 136 . + . ID=gene-O5D79_003060;Name=O5D79_003060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003060;partial=true;start_range=.,1 DALFDJ020000016.1 Protein Homology CDS 1 136 . + 1 ID=cds-HJH9164513.1;Parent=gene-O5D79_003060;Dbxref=NCBI_GP:HJH9164513.1;Name=HJH9164513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460123.1;locus_tag=O5D79_003060;partial=true;product=YceK/YidQ family lipoprotein;protein_id=HJH9164513.1;start_range=.,1;transl_table=11 DALFDJ020000016.1 tpg gene 137 511 . - . ID=gene-O5D79_003061;Name=O5D79_003061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003061 DALFDJ020000016.1 Protein Homology CDS 137 511 . - 0 ID=cds-HJH9164514.1;Parent=gene-O5D79_003061;Dbxref=NCBI_GP:HJH9164514.1;Name=HJH9164514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460124.1;locus_tag=O5D79_003061;product=MysB family protein;protein_id=HJH9164514.1;transl_table=11 DALFDJ020000016.1 tpg gene 593 1807 . - . ID=gene-O5D79_003062;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=O5D79_003062 DALFDJ020000016.1 Protein Homology CDS 593 1807 . - 0 ID=cds-HJH9164515.1;Parent=gene-O5D79_003062;Dbxref=NCBI_GP:HJH9164515.1;Name=HJH9164515.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460125.1;locus_tag=O5D79_003062;product=multidrug efflux MFS transporter MdtG;protein_id=HJH9164515.1;transl_table=11 DALFDJ020000016.1 tpg gene 1962 2882 . - . ID=gene-O5D79_003063;Name=O5D79_003063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003063 DALFDJ020000016.1 Protein Homology CDS 1962 2882 . - 0 ID=cds-HJH9164516.1;Parent=gene-O5D79_003063;Dbxref=NCBI_GP:HJH9164516.1;Name=HJH9164516.1;Ontology_term=GO:0036104,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460126.1;locus_tag=O5D79_003063;product=Kdo(2)-lipid IV(A) acyltransferase;protein_id=HJH9164516.1;transl_table=11 DALFDJ020000016.1 tpg gene 3102 4154 . + . ID=gene-O5D79_003064;Name=O5D79_003064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003064 DALFDJ020000016.1 Protein Homology CDS 3102 4154 . + 0 ID=cds-HJH9164517.1;Parent=gene-O5D79_003064;Dbxref=NCBI_GP:HJH9164517.1;Name=HJH9164517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460127.1;locus_tag=O5D79_003064;product=rhodanese-related sulfurtransferase;protein_id=HJH9164517.1;transl_table=11 DALFDJ020000016.1 tpg gene 4206 4781 . - . ID=gene-O5D79_003065;Name=O5D79_003065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003065 DALFDJ020000016.1 Protein Homology CDS 4206 4781 . - 0 ID=cds-HJH9164518.1;Parent=gene-O5D79_003065;Dbxref=NCBI_GP:HJH9164518.1;Name=HJH9164518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460128.1;locus_tag=O5D79_003065;product=YceI family protein;protein_id=HJH9164518.1;transl_table=11 DALFDJ020000016.1 tpg gene 4778 5350 . - . ID=gene-O5D79_003066;Name=O5D79_003066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003066 DALFDJ020000016.1 Protein Homology CDS 4778 5350 . - 0 ID=cds-HJH9164519.1;Parent=gene-O5D79_003066;Dbxref=NCBI_GP:HJH9164519.1;Name=HJH9164519.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460129.1;locus_tag=O5D79_003066;product=cytochrome b;protein_id=HJH9164519.1;transl_table=11 DALFDJ020000016.1 tpg gene 5613 5726 . - . ID=gene-O5D79_003067;Name=O5D79_003067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003067 DALFDJ020000016.1 Protein Homology CDS 5613 5726 . - 0 ID=cds-HJH9164520.1;Parent=gene-O5D79_003067;Dbxref=NCBI_GP:HJH9164520.1;Name=HJH9164520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460130.1;locus_tag=O5D79_003067;product=YceO family protein;protein_id=HJH9164520.1;transl_table=11 DALFDJ020000016.1 tpg gene 5767 6885 . - . ID=gene-O5D79_003068;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=O5D79_003068 DALFDJ020000016.1 Protein Homology CDS 5767 6885 . - 0 ID=cds-HJH9164521.1;Parent=gene-O5D79_003068;Dbxref=NCBI_GP:HJH9164521.1;Name=HJH9164521.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460131.1;locus_tag=O5D79_003068;product=N-methyl-L-tryptophan oxidase;protein_id=HJH9164521.1;transl_table=11 DALFDJ020000016.1 tpg gene 6998 7252 . - . ID=gene-O5D79_003069;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=O5D79_003069 DALFDJ020000016.1 Protein Homology CDS 6998 7252 . - 0 ID=cds-HJH9164522.1;Parent=gene-O5D79_003069;Dbxref=NCBI_GP:HJH9164522.1;Name=HJH9164522.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=O5D79_003069;product=biofilm formation regulator BssS;protein_id=HJH9164522.1;transl_table=11 DALFDJ020000016.1 tpg gene 7542 7787 . - . ID=gene-O5D79_003070;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=O5D79_003070 DALFDJ020000016.1 Protein Homology CDS 7542 7787 . - 0 ID=cds-HJH9164523.1;Parent=gene-O5D79_003070;Dbxref=NCBI_GP:HJH9164523.1;Name=HJH9164523.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=O5D79_003070;product=DNA damage-inducible protein I;protein_id=HJH9164523.1;transl_table=11 DALFDJ020000016.1 tpg gene 7861 8907 . - . ID=gene-O5D79_003071;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=O5D79_003071 DALFDJ020000016.1 Protein Homology CDS 7861 8907 . - 0 ID=cds-HJH9164524.1;Parent=gene-O5D79_003071;Dbxref=NCBI_GP:HJH9164524.1;Name=HJH9164524.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460134.1;locus_tag=O5D79_003071;product=dihydroorotase;protein_id=HJH9164524.1;transl_table=11 DALFDJ020000016.1 tpg gene 9011 9571 . - . ID=gene-O5D79_003072;Name=O5D79_003072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003072 DALFDJ020000016.1 Protein Homology CDS 9011 9571 . - 0 ID=cds-HJH9164525.1;Parent=gene-O5D79_003072;Dbxref=NCBI_GP:HJH9164525.1;Name=HJH9164525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460135.1;locus_tag=O5D79_003072;product=lipoprotein;protein_id=HJH9164525.1;transl_table=11 DALFDJ020000016.1 tpg gene 9696 10343 . - . ID=gene-O5D79_003073;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=O5D79_003073 DALFDJ020000016.1 Protein Homology CDS 9696 10343 . - 0 ID=cds-HJH9164526.1;Parent=gene-O5D79_003073;Dbxref=NCBI_GP:HJH9164526.1;Name=HJH9164526.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460136.1;locus_tag=O5D79_003073;product=glutaredoxin 2;protein_id=HJH9164526.1;transl_table=11 DALFDJ020000016.1 tpg gene 10407 11615 . - . ID=gene-O5D79_003074;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=O5D79_003074 DALFDJ020000016.1 Protein Homology CDS 10407 11615 . - 0 ID=cds-HJH9164527.1;Parent=gene-O5D79_003074;Dbxref=NCBI_GP:HJH9164527.1;Name=HJH9164527.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=O5D79_003074;product=multidrug efflux MFS transporter MdtH;protein_id=HJH9164527.1;transl_table=11 DALFDJ020000016.1 tpg gene 11852 12436 . + . ID=gene-O5D79_003075;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=O5D79_003075 DALFDJ020000016.1 Protein Homology CDS 11852 12436 . + 0 ID=cds-HJH9164528.1;Parent=gene-O5D79_003075;Dbxref=NCBI_GP:HJH9164528.1;Name=HJH9164528.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=O5D79_003075;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=HJH9164528.1;transl_table=11 DALFDJ020000016.1 tpg gene 12472 13119 . + . ID=gene-O5D79_003076;Name=O5D79_003076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003076 DALFDJ020000016.1 Protein Homology CDS 12472 13119 . + 0 ID=cds-HJH9164529.1;Parent=gene-O5D79_003076;Dbxref=NCBI_GP:HJH9164529.1;Name=HJH9164529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460139.1;locus_tag=O5D79_003076;product=YceH family protein;protein_id=HJH9164529.1;transl_table=11 DALFDJ020000016.1 tpg gene 13121 14044 . + . ID=gene-O5D79_003077;Name=O5D79_003077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003077 DALFDJ020000016.1 Protein Homology CDS 13121 14044 . + 0 ID=cds-HJH9164530.1;Parent=gene-O5D79_003077;Dbxref=NCBI_GP:HJH9164530.1;Name=HJH9164530.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460140.1;locus_tag=O5D79_003077;product=Gfo/Idh/MocA family protein;protein_id=HJH9164530.1;transl_table=11 DALFDJ020000016.1 tpg gene 14348 15883 . + . ID=gene-O5D79_003078;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=O5D79_003078 DALFDJ020000016.1 Protein Homology CDS 14348 15883 . + 0 ID=cds-HJH9164531.1;Parent=gene-O5D79_003078;Dbxref=NCBI_GP:HJH9164531.1;Name=HJH9164531.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226258.1;locus_tag=O5D79_003078;product=murein biosynthesis integral membrane protein MurJ;protein_id=HJH9164531.1;transl_table=11 DALFDJ020000016.1 tpg gene 15965 16387 . - . ID=gene-O5D79_003079;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=O5D79_003079 DALFDJ020000016.1 Protein Homology CDS 15965 16387 . - 0 ID=cds-HJH9164532.1;Parent=gene-O5D79_003079;Dbxref=NCBI_GP:HJH9164532.1;Name=HJH9164532.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460142.1;locus_tag=O5D79_003079;product=flagella biosynthesis chaperone FlgN;protein_id=HJH9164532.1;transl_table=11 DALFDJ020000016.1 tpg gene 16392 16685 . - . ID=gene-O5D79_003080;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=O5D79_003080 DALFDJ020000016.1 Protein Homology CDS 16392 16685 . - 0 ID=cds-HJH9164533.1;Parent=gene-O5D79_003080;Dbxref=NCBI_GP:HJH9164533.1;Name=HJH9164533.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460143.1;locus_tag=O5D79_003080;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=HJH9164533.1;transl_table=11 DALFDJ020000016.1 tpg gene 16777 17436 . - . ID=gene-O5D79_003081;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=O5D79_003081 DALFDJ020000016.1 Protein Homology CDS 16777 17436 . - 0 ID=cds-HJH9164534.1;Parent=gene-O5D79_003081;Dbxref=NCBI_GP:HJH9164534.1;Name=HJH9164534.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460144.1;locus_tag=O5D79_003081;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=HJH9164534.1;transl_table=11 DALFDJ020000016.1 tpg gene 17593 18009 . + . ID=gene-O5D79_003082;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=O5D79_003082 DALFDJ020000016.1 Protein Homology CDS 17593 18009 . + 0 ID=cds-HJH9164535.1;Parent=gene-O5D79_003082;Dbxref=NCBI_GP:HJH9164535.1;Name=HJH9164535.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460145.1;locus_tag=O5D79_003082;product=flagellar basal body rod protein FlgB;protein_id=HJH9164535.1;transl_table=11 DALFDJ020000016.1 tpg gene 18013 18417 . + . ID=gene-O5D79_003083;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=O5D79_003083 DALFDJ020000016.1 Protein Homology CDS 18013 18417 . + 0 ID=cds-HJH9164536.1;Parent=gene-O5D79_003083;Dbxref=NCBI_GP:HJH9164536.1;Name=HJH9164536.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=O5D79_003083;product=flagellar basal body rod protein FlgC;protein_id=HJH9164536.1;transl_table=11 DALFDJ020000016.1 tpg gene 18429 19127 . + . ID=gene-O5D79_003084;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=O5D79_003084 DALFDJ020000016.1 Protein Homology CDS 18429 19127 . + 0 ID=cds-HJH9164537.1;Parent=gene-O5D79_003084;Dbxref=NCBI_GP:HJH9164537.1;Name=HJH9164537.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460147.1;locus_tag=O5D79_003084;product=flagellar hook assembly protein FlgD;protein_id=HJH9164537.1;transl_table=11 DALFDJ020000016.1 tpg gene 19154 20365 . + . ID=gene-O5D79_003085;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=O5D79_003085 DALFDJ020000016.1 Protein Homology CDS 19154 20365 . + 0 ID=cds-HJH9164538.1;Parent=gene-O5D79_003085;Dbxref=NCBI_GP:HJH9164538.1;Name=HJH9164538.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460148.1;locus_tag=O5D79_003085;product=flagellar hook protein FlgE;protein_id=HJH9164538.1;transl_table=11 DALFDJ020000016.1 tpg gene 20386 21141 . + . ID=gene-O5D79_003086;Name=O5D79_003086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003086 DALFDJ020000016.1 Protein Homology CDS 20386 21141 . + 0 ID=cds-HJH9164539.1;Parent=gene-O5D79_003086;Dbxref=NCBI_GP:HJH9164539.1;Name=HJH9164539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=O5D79_003086;product=flagellar basal body rod protein FlgF;protein_id=HJH9164539.1;transl_table=11 DALFDJ020000016.1 tpg gene 21155 21937 . + . ID=gene-O5D79_003087;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=O5D79_003087 DALFDJ020000016.1 Protein Homology CDS 21155 21937 . + 0 ID=cds-HJH9164540.1;Parent=gene-O5D79_003087;Dbxref=NCBI_GP:HJH9164540.1;Name=HJH9164540.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=O5D79_003087;product=flagellar basal-body rod protein FlgG;protein_id=HJH9164540.1;transl_table=11 DALFDJ020000016.1 tpg gene 21992 22690 . + . ID=gene-O5D79_003088;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=O5D79_003088 DALFDJ020000016.1 Protein Homology CDS 21992 22690 . + 0 ID=cds-HJH9164541.1;Parent=gene-O5D79_003088;Dbxref=NCBI_GP:HJH9164541.1;Name=HJH9164541.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460151.1;locus_tag=O5D79_003088;product=flagellar basal body L-ring protein FlgH;protein_id=HJH9164541.1;transl_table=11 DALFDJ020000016.1 tpg gene 22702 23799 . + . ID=gene-O5D79_003089;Name=O5D79_003089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003089 DALFDJ020000016.1 Protein Homology CDS 22702 23799 . + 0 ID=cds-HJH9164542.1;Parent=gene-O5D79_003089;Dbxref=NCBI_GP:HJH9164542.1;Name=HJH9164542.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460152.1;locus_tag=O5D79_003089;product=flagellar basal body P-ring protein FlgI;protein_id=HJH9164542.1;transl_table=11 DALFDJ020000016.1 tpg gene 23799 24749 . + . ID=gene-O5D79_003090;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=O5D79_003090 DALFDJ020000016.1 Protein Homology CDS 23799 24749 . + 0 ID=cds-HJH9164543.1;Parent=gene-O5D79_003090;Dbxref=NCBI_GP:HJH9164543.1;Name=HJH9164543.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460153.1;locus_tag=O5D79_003090;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=HJH9164543.1;transl_table=11 DALFDJ020000016.1 tpg gene 24814 26475 . + . ID=gene-O5D79_003091;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=O5D79_003091 DALFDJ020000016.1 Protein Homology CDS 24814 26475 . + 0 ID=cds-HJH9164544.1;Parent=gene-O5D79_003091;Dbxref=NCBI_GP:HJH9164544.1;Name=HJH9164544.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460154.1;locus_tag=O5D79_003091;product=flagellar hook-associated protein FlgK;protein_id=HJH9164544.1;transl_table=11 DALFDJ020000016.1 tpg gene 26490 27443 . + . ID=gene-O5D79_003092;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=O5D79_003092 DALFDJ020000016.1 Protein Homology CDS 26490 27443 . + 0 ID=cds-HJH9164545.1;Parent=gene-O5D79_003092;Dbxref=NCBI_GP:HJH9164545.1;Name=HJH9164545.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=O5D79_003092;product=flagellar hook-associated protein FlgL;protein_id=HJH9164545.1;transl_table=11 DALFDJ020000016.1 tpg gene 27696 30899 . - . ID=gene-O5D79_003093;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=O5D79_003093 DALFDJ020000016.1 Protein Homology CDS 27696 30899 . - 0 ID=cds-HJH9164546.1;Parent=gene-O5D79_003093;Dbxref=NCBI_GP:HJH9164546.1;Name=HJH9164546.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460156.1;locus_tag=O5D79_003093;product=ribonuclease E;protein_id=HJH9164546.1;transl_table=11 DALFDJ020000016.1 tpg gene 31473 32432 . + . ID=gene-O5D79_003094;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=O5D79_003094 DALFDJ020000016.1 Protein Homology CDS 31473 32432 . + 0 ID=cds-HJH9164547.1;Parent=gene-O5D79_003094;Dbxref=NCBI_GP:HJH9164547.1;Name=HJH9164547.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460157.1;locus_tag=O5D79_003094;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=HJH9164547.1;transl_table=11 DALFDJ020000016.1 tpg gene 32588 33331 . + . ID=gene-O5D79_003095;Name=O5D79_003095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003095 DALFDJ020000016.1 Protein Homology CDS 32588 33331 . + 0 ID=cds-HJH9164548.1;Parent=gene-O5D79_003095;Dbxref=NCBI_GP:HJH9164548.1;Name=HJH9164548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460158.1;locus_tag=O5D79_003095;product=DUF3053 domain-containing protein;protein_id=HJH9164548.1;transl_table=11 DALFDJ020000016.1 tpg gene 33534 33758 . + . ID=gene-O5D79_003096;Name=O5D79_003096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003096 DALFDJ020000016.1 GeneMarkS-2+ CDS 33534 33758 . + 0 ID=cds-HJH9164549.1;Parent=gene-O5D79_003096;Dbxref=NCBI_GP:HJH9164549.1;Name=HJH9164549.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_003096;product=hypothetical protein;protein_id=HJH9164549.1;transl_table=11 DALFDJ020000016.1 tpg gene 33830 34414 . - . ID=gene-O5D79_003097;Name=O5D79_003097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003097 DALFDJ020000016.1 Protein Homology CDS 33830 34414 . - 0 ID=cds-HJH9164550.1;Parent=gene-O5D79_003097;Dbxref=NCBI_GP:HJH9164550.1;Name=HJH9164550.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460159.1;locus_tag=O5D79_003097;product=Maf family protein;protein_id=HJH9164550.1;transl_table=11 DALFDJ020000016.1 tpg gene 34612 35133 . + . ID=gene-O5D79_003098;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=O5D79_003098 DALFDJ020000016.1 Protein Homology CDS 34612 35133 . + 0 ID=cds-HJH9164551.1;Parent=gene-O5D79_003098;Dbxref=NCBI_GP:HJH9164551.1;Name=HJH9164551.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=O5D79_003098;product=23S rRNA accumulation protein YceD;protein_id=HJH9164551.1;transl_table=11 DALFDJ020000016.1 tpg gene 35185 35358 . + . ID=gene-O5D79_003099;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=O5D79_003099 DALFDJ020000016.1 Protein Homology CDS 35185 35358 . + 0 ID=cds-HJH9164552.1;Parent=gene-O5D79_003099;Dbxref=NCBI_GP:HJH9164552.1;Name=HJH9164552.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=O5D79_003099;product=50S ribosomal protein L32;protein_id=HJH9164552.1;transl_table=11 DALFDJ020000016.1 tpg gene 35492 36571 . + . ID=gene-O5D79_003100;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=O5D79_003100 DALFDJ020000016.1 Protein Homology CDS 35492 36571 . + 0 ID=cds-HJH9164553.1;Parent=gene-O5D79_003100;Dbxref=NCBI_GP:HJH9164553.1;Name=HJH9164553.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460162.1;locus_tag=O5D79_003100;product=phosphate acyltransferase PlsX;protein_id=HJH9164553.1;transl_table=11 DALFDJ020000016.1 tpg gene 36651 37604 . + . ID=gene-O5D79_003101;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=O5D79_003101 DALFDJ020000016.1 Protein Homology CDS 36651 37604 . + 0 ID=cds-HJH9164554.1;Parent=gene-O5D79_003101;Dbxref=NCBI_GP:HJH9164554.1;Name=HJH9164554.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=O5D79_003101;product=beta-ketoacyl-ACP synthase III;protein_id=HJH9164554.1;transl_table=11 DALFDJ020000016.1 tpg gene 37620 38549 . + . ID=gene-O5D79_003102;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=O5D79_003102 DALFDJ020000016.1 Protein Homology CDS 37620 38549 . + 0 ID=cds-HJH9164555.1;Parent=gene-O5D79_003102;Dbxref=NCBI_GP:HJH9164555.1;Name=HJH9164555.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460164.1;locus_tag=O5D79_003102;product=ACP S-malonyltransferase;protein_id=HJH9164555.1;transl_table=11 DALFDJ020000016.1 tpg gene 38562 39296 . + . ID=gene-O5D79_003103;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=O5D79_003103 DALFDJ020000016.1 Protein Homology CDS 38562 39296 . + 0 ID=cds-HJH9164556.1;Parent=gene-O5D79_003103;Dbxref=NCBI_GP:HJH9164556.1;Name=HJH9164556.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=O5D79_003103;product=3-oxoacyl-ACP reductase FabG;protein_id=HJH9164556.1;transl_table=11 DALFDJ020000016.1 tpg gene 39452 39688 . + . ID=gene-O5D79_003104;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=O5D79_003104 DALFDJ020000016.1 Protein Homology CDS 39452 39688 . + 0 ID=cds-HJH9164557.1;Parent=gene-O5D79_003104;Dbxref=NCBI_GP:HJH9164557.1;Name=HJH9164557.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=O5D79_003104;product=acyl carrier protein;protein_id=HJH9164557.1;transl_table=11 DALFDJ020000016.1 tpg gene 39774 41015 . + . ID=gene-O5D79_003105;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=O5D79_003105 DALFDJ020000016.1 Protein Homology CDS 39774 41015 . + 0 ID=cds-HJH9164558.1;Parent=gene-O5D79_003105;Dbxref=NCBI_GP:HJH9164558.1;Name=HJH9164558.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460167.1;locus_tag=O5D79_003105;product=beta-ketoacyl-ACP synthase II;protein_id=HJH9164558.1;transl_table=11 DALFDJ020000016.1 tpg gene 41139 41948 . + . ID=gene-O5D79_003106;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=O5D79_003106 DALFDJ020000016.1 Protein Homology CDS 41139 41948 . + 0 ID=cds-HJH9164559.1;Parent=gene-O5D79_003106;Dbxref=NCBI_GP:HJH9164559.1;Name=HJH9164559.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460168.1;locus_tag=O5D79_003106;product=aminodeoxychorismate lyase;protein_id=HJH9164559.1;transl_table=11 DALFDJ020000016.1 tpg gene 41951 42973 . + . ID=gene-O5D79_003107;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=O5D79_003107 DALFDJ020000016.1 Protein Homology CDS 41951 42973 . + 0 ID=cds-HJH9164560.1;Parent=gene-O5D79_003107;Dbxref=NCBI_GP:HJH9164560.1;Name=HJH9164560.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460169.1;locus_tag=O5D79_003107;product=cell division protein YceG;protein_id=HJH9164560.1;transl_table=11 DALFDJ020000016.1 tpg gene 42963 43604 . + . ID=gene-O5D79_003108;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=O5D79_003108 DALFDJ020000016.1 Protein Homology CDS 42963 43604 . + 0 ID=cds-HJH9164561.1;Parent=gene-O5D79_003108;Dbxref=NCBI_GP:HJH9164561.1;Name=HJH9164561.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460170.1;locus_tag=O5D79_003108;product=dTMP kinase;protein_id=HJH9164561.1;transl_table=11 DALFDJ020000016.1 tpg gene 43601 44605 . + . ID=gene-O5D79_003109;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=O5D79_003109 DALFDJ020000016.1 Protein Homology CDS 43601 44605 . + 0 ID=cds-HJH9164562.1;Parent=gene-O5D79_003109;Dbxref=NCBI_GP:HJH9164562.1;Name=HJH9164562.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460171.1;locus_tag=O5D79_003109;product=DNA polymerase III subunit delta';protein_id=HJH9164562.1;transl_table=11 DALFDJ020000016.1 tpg gene 44616 45413 . + . ID=gene-O5D79_003110;Name=O5D79_003110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003110 DALFDJ020000016.1 Protein Homology CDS 44616 45413 . + 0 ID=cds-HJH9164563.1;Parent=gene-O5D79_003110;Dbxref=NCBI_GP:HJH9164563.1;Name=HJH9164563.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460172.1;locus_tag=O5D79_003110;product=metal-dependent hydrolase;protein_id=HJH9164563.1;transl_table=11 DALFDJ020000016.1 tpg gene 45708 47141 . + . ID=gene-O5D79_003111;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=O5D79_003111 DALFDJ020000016.1 Protein Homology CDS 45708 47141 . + 0 ID=cds-HJH9164564.1;Parent=gene-O5D79_003111;Dbxref=NCBI_GP:HJH9164564.1;Name=HJH9164564.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460173.1;locus_tag=O5D79_003111;product=PTS glucose transporter subunit IIBC;protein_id=HJH9164564.1;transl_table=11 DALFDJ020000016.1 tpg gene 47226 49400 . - . ID=gene-O5D79_003112;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=O5D79_003112 DALFDJ020000016.1 Protein Homology CDS 47226 49400 . - 0 ID=cds-HJH9164565.1;Parent=gene-O5D79_003112;Dbxref=NCBI_GP:HJH9164565.1;Name=HJH9164565.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460174.1;locus_tag=O5D79_003112;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=HJH9164565.1;transl_table=11 DALFDJ020000016.1 tpg gene 49742 50101 . + . ID=gene-O5D79_003113;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=O5D79_003113 DALFDJ020000016.1 Protein Homology CDS 49742 50101 . + 0 ID=cds-HJH9164566.1;Parent=gene-O5D79_003113;Dbxref=NCBI_GP:HJH9164566.1;Name=HJH9164566.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460175.1;locus_tag=O5D79_003113;product=purine nucleoside phosphoramidase;protein_id=HJH9164566.1;transl_table=11 DALFDJ020000016.1 tpg gene 50104 50478 . + . ID=gene-O5D79_003114;Name=O5D79_003114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003114 DALFDJ020000016.1 Protein Homology CDS 50104 50478 . + 0 ID=cds-HJH9164567.1;Parent=gene-O5D79_003114;Dbxref=NCBI_GP:HJH9164567.1;Name=HJH9164567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460176.1;locus_tag=O5D79_003114;product=YcfL family protein;protein_id=HJH9164567.1;transl_table=11 DALFDJ020000016.1 tpg gene 50492 51130 . + . ID=gene-O5D79_003115;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=O5D79_003115 DALFDJ020000016.1 Protein Homology CDS 50492 51130 . + 0 ID=cds-HJH9164568.1;Parent=gene-O5D79_003115;Dbxref=NCBI_GP:HJH9164568.1;Name=HJH9164568.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460177.1;locus_tag=O5D79_003115;product=penicillin-binding protein activator LpoB;protein_id=HJH9164568.1;transl_table=11 DALFDJ020000016.1 tpg gene 51111 51935 . + . ID=gene-O5D79_003116;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=O5D79_003116 DALFDJ020000016.1 Protein Homology CDS 51111 51935 . + 0 ID=cds-HJH9164569.1;Parent=gene-O5D79_003116;Dbxref=NCBI_GP:HJH9164569.1;Name=HJH9164569.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460178.1;locus_tag=O5D79_003116;product=thiamine kinase;protein_id=HJH9164569.1;transl_table=11 DALFDJ020000016.1 tpg gene 51946 52971 . + . ID=gene-O5D79_003117;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=O5D79_003117 DALFDJ020000016.1 Protein Homology CDS 51946 52971 . + 0 ID=cds-HJH9164570.1;Parent=gene-O5D79_003117;Dbxref=NCBI_GP:HJH9164570.1;Name=HJH9164570.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460179.1;locus_tag=O5D79_003117;product=beta-N-acetylhexosaminidase;protein_id=HJH9164570.1;transl_table=11 DALFDJ020000016.1 tpg gene 52996 53538 . + . ID=gene-O5D79_003118;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=O5D79_003118 DALFDJ020000016.1 Protein Homology CDS 52996 53538 . + 0 ID=cds-HJH9164571.1;Parent=gene-O5D79_003118;Dbxref=NCBI_GP:HJH9164571.1;Name=HJH9164571.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=O5D79_003118;product=alpha/beta hydrolase YcfP;protein_id=HJH9164571.1;transl_table=11 DALFDJ020000016.1 tpg gene 53793 55097 . + . ID=gene-O5D79_003119;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=O5D79_003119 DALFDJ020000016.1 Protein Homology CDS 53793 55097 . + 0 ID=cds-HJH9164572.1;Parent=gene-O5D79_003119;Dbxref=NCBI_GP:HJH9164572.1;Name=HJH9164572.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=O5D79_003119;product=NADH-quinone dehydrogenase;protein_id=HJH9164572.1;transl_table=11 DALFDJ020000016.1 tpg gene 55278 55817 . + . ID=gene-O5D79_003120;Name=O5D79_003120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003120 DALFDJ020000016.1 Protein Homology CDS 55278 55817 . + 0 ID=cds-HJH9164573.1;Parent=gene-O5D79_003120;Dbxref=NCBI_GP:HJH9164573.1;Name=HJH9164573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460182.1;locus_tag=O5D79_003120;product=glycine zipper 2TM domain-containing protein;protein_id=HJH9164573.1;transl_table=11 DALFDJ020000016.1 tpg gene 55892 56527 . - . ID=gene-O5D79_003121;Name=O5D79_003121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003121 DALFDJ020000016.1 Protein Homology CDS 55892 56527 . - 0 ID=cds-HJH9164574.1;Parent=gene-O5D79_003121;Dbxref=NCBI_GP:HJH9164574.1;Name=HJH9164574.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460183.1;locus_tag=O5D79_003121;product=TetR/AcrR family transcriptional regulator;protein_id=HJH9164574.1;transl_table=11 DALFDJ020000016.1 tpg gene 56769 57026 . + . ID=gene-O5D79_003122;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=O5D79_003122 DALFDJ020000016.1 Protein Homology CDS 56769 57026 . + 0 ID=cds-HJH9164575.1;Parent=gene-O5D79_003122;Dbxref=NCBI_GP:HJH9164575.1;Name=HJH9164575.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460184.1;locus_tag=O5D79_003122;product=multiple stress resistance protein BhsA;protein_id=HJH9164575.1;transl_table=11 DALFDJ020000016.1 tpg gene 57123 58088 . - . ID=gene-O5D79_003123;Name=O5D79_003123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003123 DALFDJ020000016.1 Protein Homology CDS 57123 58088 . - 0 ID=cds-HJH9164576.1;Parent=gene-O5D79_003123;Dbxref=NCBI_GP:HJH9164576.1;Name=HJH9164576.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460185.1;locus_tag=O5D79_003123;product=L%2CD-transpeptidase family protein;protein_id=HJH9164576.1;transl_table=11 DALFDJ020000016.1 tpg gene 58236 61682 . - . ID=gene-O5D79_003124;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=O5D79_003124 DALFDJ020000016.1 Protein Homology CDS 58236 61682 . - 0 ID=cds-HJH9164577.1;Parent=gene-O5D79_003124;Dbxref=NCBI_GP:HJH9164577.1;Name=HJH9164577.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=O5D79_003124;product=transcription-repair coupling factor;protein_id=HJH9164577.1;transl_table=11 DALFDJ020000016.1 tpg gene 62020 63219 . + . ID=gene-O5D79_003125;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=O5D79_003125 DALFDJ020000016.1 Protein Homology CDS 62020 63219 . + 0 ID=cds-HJH9164578.1;Parent=gene-O5D79_003125;Dbxref=NCBI_GP:HJH9164578.1;Name=HJH9164578.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=O5D79_003125;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=HJH9164578.1;transl_table=11 DALFDJ020000016.1 tpg gene 63212 63913 . + . ID=gene-O5D79_003126;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=O5D79_003126 DALFDJ020000016.1 Protein Homology CDS 63212 63913 . + 0 ID=cds-HJH9164579.1;Parent=gene-O5D79_003126;Dbxref=NCBI_GP:HJH9164579.1;Name=HJH9164579.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460188.1;locus_tag=O5D79_003126;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=HJH9164579.1;transl_table=11 DALFDJ020000016.1 tpg gene 63913 65157 . + . ID=gene-O5D79_003127;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=O5D79_003127 DALFDJ020000016.1 Protein Homology CDS 63913 65157 . + 0 ID=cds-HJH9164580.1;Parent=gene-O5D79_003127;Dbxref=NCBI_GP:HJH9164580.1;Name=HJH9164580.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=O5D79_003127;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=HJH9164580.1;transl_table=11 DALFDJ020000016.1 tpg gene 65186 66097 . + . ID=gene-O5D79_003128;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=O5D79_003128 DALFDJ020000016.1 Protein Homology CDS 65186 66097 . + 0 ID=cds-HJH9164581.1;Parent=gene-O5D79_003128;Dbxref=NCBI_GP:HJH9164581.1;Name=HJH9164581.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460190.1;locus_tag=O5D79_003128;product=N-acetylglucosamine kinase;protein_id=HJH9164581.1;transl_table=11 DALFDJ020000016.1 tpg gene 66116 66937 . + . ID=gene-O5D79_003129;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=O5D79_003129 DALFDJ020000016.1 Protein Homology CDS 66116 66937 . + 0 ID=cds-HJH9164582.1;Parent=gene-O5D79_003129;Dbxref=NCBI_GP:HJH9164582.1;Name=HJH9164582.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=O5D79_003129;product=Sir2 family NAD+-dependent deacetylase;protein_id=HJH9164582.1;transl_table=11 DALFDJ020000016.1 tpg gene 67019 68065 . - . ID=gene-O5D79_003130;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=O5D79_003130 DALFDJ020000016.1 Protein Homology CDS 67019 68065 . - 0 ID=cds-HJH9164583.1;Parent=gene-O5D79_003130;Dbxref=NCBI_GP:HJH9164583.1;Name=HJH9164583.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=O5D79_003130;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=HJH9164583.1;transl_table=11 DALFDJ020000016.1 tpg gene 68090 68869 . - . ID=gene-O5D79_003131;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=O5D79_003131 DALFDJ020000016.1 Protein Homology CDS 68090 68869 . - 0 ID=cds-HJH9164584.1;Parent=gene-O5D79_003131;Dbxref=NCBI_GP:HJH9164584.1;Name=HJH9164584.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460193.1;locus_tag=O5D79_003131;product=spermidine/putrescine ABC transporter permease PotC;protein_id=HJH9164584.1;transl_table=11 DALFDJ020000016.1 tpg gene 69185 70195 . - . ID=gene-O5D79_003132;Name=sifA;gbkey=Gene;gene=sifA;gene_biotype=protein_coding;locus_tag=O5D79_003132 DALFDJ020000016.1 Protein Homology CDS 69185 70195 . - 0 ID=cds-HJH9164585.1;Parent=gene-O5D79_003132;Dbxref=NCBI_GP:HJH9164585.1;Name=HJH9164585.1;gbkey=CDS;gene=sifA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460194.1;locus_tag=O5D79_003132;product=SPI-2 type III secretion system effector SifA;protein_id=HJH9164585.1;transl_table=11 DALFDJ020000016.1 tpg gene 70524 71387 . - . ID=gene-O5D79_003133;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=O5D79_003133 DALFDJ020000016.1 Protein Homology CDS 70524 71387 . - 0 ID=cds-HJH9164586.1;Parent=gene-O5D79_003133;Dbxref=NCBI_GP:HJH9164586.1;Name=HJH9164586.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460195.1;locus_tag=O5D79_003133;product=spermidine/putrescine ABC transporter permease PotB;protein_id=HJH9164586.1;transl_table=11 DALFDJ020000016.1 tpg gene 71371 72507 . - . ID=gene-O5D79_003134;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=O5D79_003134 DALFDJ020000016.1 Protein Homology CDS 71371 72507 . - 0 ID=cds-HJH9164587.1;Parent=gene-O5D79_003134;Dbxref=NCBI_GP:HJH9164587.1;Name=HJH9164587.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460196.1;locus_tag=O5D79_003134;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=HJH9164587.1;transl_table=11 DALFDJ020000016.1 tpg gene 72758 73987 . + . ID=gene-O5D79_003135;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=O5D79_003135 DALFDJ020000016.1 Protein Homology CDS 72758 73987 . + 0 ID=cds-HJH9164588.1;Parent=gene-O5D79_003135;Dbxref=NCBI_GP:HJH9164588.1;Name=HJH9164588.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460197.1;locus_tag=O5D79_003135;product=peptidase T;protein_id=HJH9164588.1;transl_table=11 DALFDJ020000016.1 tpg gene 73991 75325 . + . ID=gene-O5D79_003136;Name=O5D79_003136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003136 DALFDJ020000016.1 Protein Homology CDS 73991 75325 . + 0 ID=cds-HJH9164589.1;Parent=gene-O5D79_003136;Dbxref=NCBI_GP:HJH9164589.1;Name=HJH9164589.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460198.1;locus_tag=O5D79_003136;product=tetratricopeptide repeat protein;protein_id=HJH9164589.1;transl_table=11 DALFDJ020000016.1 tpg gene 75365 76486 . - . ID=gene-O5D79_003137;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=O5D79_003137 DALFDJ020000016.1 Protein Homology CDS 75365 76486 . - 0 ID=cds-HJH9164590.1;Parent=gene-O5D79_003137;Dbxref=NCBI_GP:HJH9164590.1;Name=HJH9164590.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460199.1;locus_tag=O5D79_003137;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=HJH9164590.1;transl_table=11 DALFDJ020000016.1 tpg gene 76567 78030 . - . ID=gene-O5D79_003138;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=O5D79_003138 DALFDJ020000016.1 Protein Homology CDS 76567 78030 . - 0 ID=cds-HJH9164591.1;Parent=gene-O5D79_003138;Dbxref=NCBI_GP:HJH9164591.1;Name=HJH9164591.1;gbkey=CDS;gene=phoQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460200.1;locus_tag=O5D79_003138;product=two-component system sensor histidine kinase PhoQ;protein_id=HJH9164591.1;transl_table=11 DALFDJ020000016.1 tpg gene 78030 78701 . - . ID=gene-O5D79_003139;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=O5D79_003139 DALFDJ020000016.1 Protein Homology CDS 78030 78701 . - 0 ID=cds-HJH9164592.1;Parent=gene-O5D79_003139;Dbxref=NCBI_GP:HJH9164592.1;Name=HJH9164592.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=O5D79_003139;product=two-component system response regulator PhoP;protein_id=HJH9164592.1;transl_table=11 DALFDJ020000016.1 tpg gene 78828 80198 . - . ID=gene-O5D79_003140;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=O5D79_003140 DALFDJ020000016.1 Protein Homology CDS 78828 80198 . - 0 ID=cds-HJH9164593.1;Parent=gene-O5D79_003140;Dbxref=NCBI_GP:HJH9164593.1;Name=HJH9164593.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=O5D79_003140;product=adenylosuccinate lyase;protein_id=HJH9164593.1;transl_table=11 DALFDJ020000016.1 tpg gene 80202 80843 . - . ID=gene-O5D79_003141;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=O5D79_003141 DALFDJ020000016.1 Protein Homology CDS 80202 80843 . - 0 ID=cds-HJH9164594.1;Parent=gene-O5D79_003141;Dbxref=NCBI_GP:HJH9164594.1;Name=HJH9164594.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=O5D79_003141;product=high frequency lysogenization protein HflD;protein_id=HJH9164594.1;transl_table=11 DALFDJ020000016.1 tpg gene 80930 82036 . - . ID=gene-O5D79_003142;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=O5D79_003142 DALFDJ020000016.1 Protein Homology CDS 80930 82036 . - 0 ID=cds-HJH9164595.1;Parent=gene-O5D79_003142;Dbxref=NCBI_GP:HJH9164595.1;Name=HJH9164595.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309632.2;locus_tag=O5D79_003142;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=HJH9164595.1;transl_table=11 DALFDJ020000016.1 tpg gene 82090 82551 . - . ID=gene-O5D79_003143;Name=O5D79_003143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003143 DALFDJ020000016.1 Protein Homology CDS 82090 82551 . - 0 ID=cds-HJH9164596.1;Parent=gene-O5D79_003143;Dbxref=NCBI_GP:HJH9164596.1;Name=HJH9164596.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460205.1;locus_tag=O5D79_003143;product=NUDIX hydrolase;protein_id=HJH9164596.1;transl_table=11 DALFDJ020000016.1 tpg gene 82563 82892 . - . ID=gene-O5D79_003144;Name=O5D79_003144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003144 DALFDJ020000016.1 Protein Homology CDS 82563 82892 . - 0 ID=cds-HJH9164597.1;Parent=gene-O5D79_003144;Dbxref=NCBI_GP:HJH9164597.1;Name=HJH9164597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460206.1;locus_tag=O5D79_003144;product=lysozyme inhibitor LprI family protein;protein_id=HJH9164597.1;transl_table=11 DALFDJ020000016.1 tpg gene 82889 83554 . - . ID=gene-O5D79_003145;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=O5D79_003145 DALFDJ020000016.1 Protein Homology CDS 82889 83554 . - 0 ID=cds-HJH9164598.1;Parent=gene-O5D79_003145;Dbxref=NCBI_GP:HJH9164598.1;Name=HJH9164598.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460207.1;locus_tag=O5D79_003145;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=HJH9164598.1;transl_table=11 DALFDJ020000016.1 tpg gene 83726 84976 . + . ID=gene-O5D79_003146;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=O5D79_003146 DALFDJ020000016.1 Protein Homology CDS 83726 84976 . + 0 ID=cds-HJH9164599.1;Parent=gene-O5D79_003146;Dbxref=NCBI_GP:HJH9164599.1;Name=HJH9164599.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=O5D79_003146;product=NADP-dependent isocitrate dehydrogenase;protein_id=HJH9164599.1;transl_table=11 DALFDJ020000016.1 tpg gene 85078 86220 . - . ID=gene-O5D79_003147;Name=O5D79_003147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003147 DALFDJ020000016.1 Protein Homology CDS 85078 86220 . - 0 ID=cds-HJH9164600.1;Parent=gene-O5D79_003147;Dbxref=NCBI_GP:HJH9164600.1;Name=HJH9164600.1;Ontology_term=GO:0015074,GO:0003677,GO:0008907;gbkey=CDS;go_function=DNA binding|0003677||IEA,integrase activity|0008907||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750633.1;locus_tag=O5D79_003147;product=phage integrase Arm DNA-binding domain-containing protein;protein_id=HJH9164600.1;transl_table=11 DALFDJ020000016.1 tpg gene 86210 86446 . - . ID=gene-O5D79_003148;Name=O5D79_003148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003148 DALFDJ020000016.1 Protein Homology CDS 86210 86446 . - 0 ID=cds-HJH9164601.1;Parent=gene-O5D79_003148;Dbxref=NCBI_GP:HJH9164601.1;Name=HJH9164601.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309637.1;locus_tag=O5D79_003148;product=excisionase;protein_id=HJH9164601.1;transl_table=11 DALFDJ020000016.1 tpg gene 86496 86999 . - . ID=gene-O5D79_003149;Name=O5D79_003149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003149 DALFDJ020000016.1 Protein Homology CDS 86496 86999 . - 0 ID=cds-HJH9164602.1;Parent=gene-O5D79_003149;Dbxref=NCBI_GP:HJH9164602.1;Name=HJH9164602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750632.1;locus_tag=O5D79_003149;product=Eaa protein;protein_id=HJH9164602.1;transl_table=11 DALFDJ020000016.1 tpg gene 86996 87328 . - . ID=gene-O5D79_003150;Name=O5D79_003150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003150 DALFDJ020000016.1 Protein Homology CDS 86996 87328 . - 0 ID=cds-HJH9164603.1;Parent=gene-O5D79_003150;Dbxref=NCBI_GP:HJH9164603.1;Name=HJH9164603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066251.1;locus_tag=O5D79_003150;product=hypothetical protein;protein_id=HJH9164603.1;transl_table=11 DALFDJ020000016.1 tpg gene 87321 87581 . - . ID=gene-O5D79_003151;Name=O5D79_003151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003151 DALFDJ020000016.1 Protein Homology CDS 87321 87581 . - 0 ID=cds-HJH9164604.1;Parent=gene-O5D79_003151;Dbxref=NCBI_GP:HJH9164604.1;Name=HJH9164604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033921.1;locus_tag=O5D79_003151;product=hypothetical protein;protein_id=HJH9164604.1;transl_table=11 DALFDJ020000016.1 tpg gene 87677 88507 . - . ID=gene-O5D79_003152;Name=recT;gbkey=Gene;gene=recT;gene_biotype=protein_coding;locus_tag=O5D79_003152 DALFDJ020000016.1 Protein Homology CDS 87677 88507 . - 0 ID=cds-HJH9164605.1;Parent=gene-O5D79_003152;Dbxref=NCBI_GP:HJH9164605.1;Name=HJH9164605.1;Ontology_term=GO:0006259,GO:0003677;gbkey=CDS;gene=recT;go_function=DNA binding|0003677||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001126028.1;locus_tag=O5D79_003152;product=recombination protein RecT;protein_id=HJH9164605.1;transl_table=11 DALFDJ020000016.1 tpg gene 88500 91190 . - . ID=gene-O5D79_003153;Name=recE;gbkey=Gene;gene=recE;gene_biotype=protein_coding;locus_tag=O5D79_003153 DALFDJ020000016.1 Protein Homology CDS 88500 91190 . - 0 ID=cds-HJH9164606.1;Parent=gene-O5D79_003153;Dbxref=NCBI_GP:HJH9164606.1;Name=HJH9164606.1;Ontology_term=GO:0090304,GO:0051908;gbkey=CDS;gene=recE;go_function=double-stranded DNA 5'-3' DNA exonuclease activity|0051908||IEA;go_process=nucleic acid metabolic process|0090304||IEA;inference=COORDINATES: protein motif:HMM:NF007259.0;locus_tag=O5D79_003153;product=exodeoxyribonuclease VIII;protein_id=HJH9164606.1;transl_table=11 DALFDJ020000016.1 tpg gene 91331 91666 . - . ID=gene-O5D79_003154;Name=O5D79_003154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003154 DALFDJ020000016.1 Protein Homology CDS 91331 91666 . - 0 ID=cds-HJH9164607.1;Parent=gene-O5D79_003154;Dbxref=NCBI_GP:HJH9164607.1;Name=HJH9164607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799630.1;locus_tag=O5D79_003154;product=hypothetical protein;protein_id=HJH9164607.1;transl_table=11 DALFDJ020000016.1 tpg gene 91742 91948 . - . ID=gene-O5D79_003155;Name=O5D79_003155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003155 DALFDJ020000016.1 Protein Homology CDS 91742 91948 . - 0 ID=cds-HJH9164608.1;Parent=gene-O5D79_003155;Dbxref=NCBI_GP:HJH9164608.1;Name=HJH9164608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000682660.1;locus_tag=O5D79_003155;product=cell division inhibitor protein;protein_id=HJH9164608.1;transl_table=11 DALFDJ020000016.1 tpg gene 91952 92227 . - . ID=gene-O5D79_003156;Name=O5D79_003156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003156 DALFDJ020000016.1 Protein Homology CDS 91952 92227 . - 0 ID=cds-HJH9164609.1;Parent=gene-O5D79_003156;Dbxref=NCBI_GP:HJH9164609.1;Name=HJH9164609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000103933.1;locus_tag=O5D79_003156;product=hypothetical protein;protein_id=HJH9164609.1;transl_table=11 DALFDJ020000016.1 tpg gene 92489 92803 . + . ID=gene-O5D79_003157;Name=O5D79_003157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003157 DALFDJ020000016.1 Protein Homology CDS 92489 92803 . + 0 ID=cds-HJH9164610.1;Parent=gene-O5D79_003157;Dbxref=NCBI_GP:HJH9164610.1;Name=HJH9164610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000188912.1;locus_tag=O5D79_003157;product=hypothetical protein;protein_id=HJH9164610.1;transl_table=11 DALFDJ020000016.1 tpg gene 93258 93683 . - . ID=gene-O5D79_003158;Name=O5D79_003158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003158 DALFDJ020000016.1 Protein Homology CDS 93258 93683 . - 0 ID=cds-HJH9164611.1;Parent=gene-O5D79_003158;Dbxref=NCBI_GP:HJH9164611.1;Name=HJH9164611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001224472.1;locus_tag=O5D79_003158;product=helix-turn-helix domain-containing protein;protein_id=HJH9164611.1;transl_table=11 DALFDJ020000016.1 tpg gene 93780 94034 . + . ID=gene-O5D79_003159;Name=O5D79_003159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003159 DALFDJ020000016.1 Protein Homology CDS 93780 94034 . + 0 ID=cds-HJH9164612.1;Parent=gene-O5D79_003159;Dbxref=NCBI_GP:HJH9164612.1;Name=HJH9164612.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF013540.6;locus_tag=O5D79_003159;product=helix-turn-helix domain-containing protein;protein_id=HJH9164612.1;transl_table=11 DALFDJ020000016.1 tpg gene 94021 94515 . + . ID=gene-O5D79_003160;Name=O5D79_003160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003160 DALFDJ020000016.1 Protein Homology CDS 94021 94515 . + 0 ID=cds-HJH9164613.1;Parent=gene-O5D79_003160;Dbxref=NCBI_GP:HJH9164613.1;Name=HJH9164613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533160.1;locus_tag=O5D79_003160;product=hypothetical protein;protein_id=HJH9164613.1;transl_table=11 DALFDJ020000016.1 tpg gene 94562 95569 . + . ID=gene-O5D79_003161;Name=O5D79_003161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003161 DALFDJ020000016.1 Protein Homology CDS 94562 95569 . + 0 ID=cds-HJH9164614.1;Parent=gene-O5D79_003161;Dbxref=NCBI_GP:HJH9164614.1;Name=HJH9164614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729543.1;locus_tag=O5D79_003161;product=DUF1376 domain-containing protein;protein_id=HJH9164614.1;transl_table=11 DALFDJ020000016.1 tpg gene 95481 96023 . + . ID=gene-O5D79_003162;Name=O5D79_003162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003162 DALFDJ020000016.1 Protein Homology CDS 95481 96023 . + 0 ID=cds-HJH9164615.1;Parent=gene-O5D79_003162;Dbxref=NCBI_GP:HJH9164615.1;Name=HJH9164615.1;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001307798.1;locus_tag=O5D79_003162;product=replication protein P;protein_id=HJH9164615.1;transl_table=11 DALFDJ020000016.1 tpg gene 96037 96432 . + . ID=gene-O5D79_003163;Name=O5D79_003163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003163 DALFDJ020000016.1 Protein Homology CDS 96037 96432 . + 0 ID=cds-HJH9164616.1;Parent=gene-O5D79_003163;Dbxref=NCBI_GP:HJH9164616.1;Name=HJH9164616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089414.1;locus_tag=O5D79_003163;product=DUF977 family protein;protein_id=HJH9164616.1;transl_table=11 DALFDJ020000016.1 tpg gene 96429 96701 . + . ID=gene-O5D79_003164;Name=O5D79_003164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003164 DALFDJ020000016.1 Protein Homology CDS 96429 96701 . + 0 ID=cds-HJH9164617.1;Parent=gene-O5D79_003164;Dbxref=NCBI_GP:HJH9164617.1;Name=HJH9164617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000687974.1;locus_tag=O5D79_003164;product=hypothetical protein;protein_id=HJH9164617.1;transl_table=11 DALFDJ020000016.1 tpg gene 96905 97060 . + . ID=gene-O5D79_003165;Name=O5D79_003165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003165 DALFDJ020000016.1 Protein Homology CDS 96905 97060 . + 0 ID=cds-HJH9164618.1;Parent=gene-O5D79_003165;Dbxref=NCBI_GP:HJH9164618.1;Name=HJH9164618.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416080.1;locus_tag=O5D79_003165;product=Hok/Gef family protein;protein_id=HJH9164618.1;transl_table=11 DALFDJ020000016.1 tpg pseudogene 97311 97560 . + . ID=gene-O5D79_003166;Name=O5D79_003166;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003166;pseudo=true DALFDJ020000016.1 Protein Homology CDS 97311 97560 . + 0 ID=cds-O5D79_003166;Parent=gene-O5D79_003166;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000911590.1;locus_tag=O5D79_003166;product=hypothetical protein;pseudo=true;transl_table=11 DALFDJ020000016.1 tpg gene 97624 98223 . + . ID=gene-O5D79_003167;Name=O5D79_003167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003167 DALFDJ020000016.1 Protein Homology CDS 97624 98223 . + 0 ID=cds-HJH9164619.1;Parent=gene-O5D79_003167;Dbxref=NCBI_GP:HJH9164619.1;Name=HJH9164619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707250.1;locus_tag=O5D79_003167;product=DUF1367 family protein;protein_id=HJH9164619.1;transl_table=11 DALFDJ020000016.1 tpg pseudogene 98295 98447 . + . ID=gene-O5D79_003168;Name=O5D79_003168;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003168;pseudo=true DALFDJ020000016.1 Protein Homology CDS 98295 98447 . + 0 ID=cds-O5D79_003168;Parent=gene-O5D79_003168;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459996.1;locus_tag=O5D79_003168;product=recombination protein NinG;pseudo=true;transl_table=11 DALFDJ020000016.1 tpg gene 98497 98580 . + . ID=gene-O5D79_003169;Name=O5D79_003169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003169 DALFDJ020000016.1 Protein Homology CDS 98497 98580 . + 0 ID=cds-HJH9164620.1;Parent=gene-O5D79_003169;Dbxref=NCBI_GP:HJH9164620.1;Name=HJH9164620.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033498.1;locus_tag=O5D79_003169;product=YlcG family protein;protein_id=HJH9164620.1;transl_table=11 DALFDJ020000016.1 tpg pseudogene 98577 98738 . + . ID=gene-O5D79_003170;Name=O5D79_003170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003170;pseudo=true DALFDJ020000016.1 Protein Homology CDS 98577 98738 . + 0 ID=cds-O5D79_003170;Parent=gene-O5D79_003170;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461552.1;locus_tag=O5D79_003170;product=bacteriophage antitermination protein Q;pseudo=true;transl_table=11 DALFDJ020000016.1 tpg pseudogene 98733 99272 . + . ID=gene-O5D79_003171;Name=O5D79_003171;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003171;pseudo=true DALFDJ020000016.1 Protein Homology CDS 98733 99272 . + 0 ID=cds-O5D79_003171;Parent=gene-O5D79_003171;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460016.1;locus_tag=O5D79_003171;product=phage tail tape measure protein;pseudo=true;transl_table=11 DALFDJ020000016.1 tpg gene 99269 99601 . + . ID=gene-O5D79_003172;Name=O5D79_003172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003172 DALFDJ020000016.1 Protein Homology CDS 99269 99601 . + 0 ID=cds-HJH9164621.1;Parent=gene-O5D79_003172;Dbxref=NCBI_GP:HJH9164621.1;Name=HJH9164621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460017.1;locus_tag=O5D79_003172;product=phage tail protein;protein_id=HJH9164621.1;transl_table=11 DALFDJ020000016.1 tpg gene 99700 100197 . + . ID=gene-O5D79_003173;Name=O5D79_003173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003173 DALFDJ020000016.1 Protein Homology CDS 99700 100197 . + 0 ID=cds-HJH9164622.1;Parent=gene-O5D79_003173;Dbxref=NCBI_GP:HJH9164622.1;Name=HJH9164622.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410972.1;locus_tag=O5D79_003173;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=HJH9164622.1;transl_table=11 DALFDJ020000016.1 tpg gene 100314 100847 . - . ID=gene-O5D79_003174;Name=sodC1;gbkey=Gene;gene=sodC1;gene_biotype=protein_coding;gene_synonym=sodCI;locus_tag=O5D79_003174 DALFDJ020000016.1 Protein Homology CDS 100314 100847 . - 0 ID=cds-HJH9164623.1;Parent=gene-O5D79_003174;Dbxref=NCBI_GP:HJH9164623.1;Name=HJH9164623.1;gbkey=CDS;gene=sodC1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460019.1;locus_tag=O5D79_003174;product=superoxide dismutase [Cu-Zn] SodC1;protein_id=HJH9164623.1;transl_table=11 DALFDJ020000016.1 tpg gene 100937 101632 . + . ID=gene-O5D79_003175;Name=O5D79_003175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003175 DALFDJ020000016.1 Protein Homology CDS 100937 101632 . + 0 ID=cds-HJH9164624.1;Parent=gene-O5D79_003175;Dbxref=NCBI_GP:HJH9164624.1;Name=HJH9164624.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460020.1;locus_tag=O5D79_003175;product=phage minor tail protein L;protein_id=HJH9164624.1;transl_table=11 DALFDJ020000016.1 tpg gene 101642 102379 . + . ID=gene-O5D79_003176;Name=O5D79_003176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003176 DALFDJ020000016.1 Protein Homology CDS 101642 102379 . + 0 ID=cds-HJH9164625.1;Parent=gene-O5D79_003176;Dbxref=NCBI_GP:HJH9164625.1;Name=HJH9164625.1;Ontology_term=GO:0006508,GO:0008234,GO:0008235,GO:0008270;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460021.1;locus_tag=O5D79_003176;product=C40 family peptidase;protein_id=HJH9164625.1;transl_table=11 DALFDJ020000016.1 tpg gene 102277 102981 . + . ID=gene-O5D79_003177;Name=O5D79_003177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003177 DALFDJ020000016.1 Protein Homology CDS 102277 102981 . + 0 ID=cds-HJH9164626.1;Parent=gene-O5D79_003177;Dbxref=NCBI_GP:HJH9164626.1;Name=HJH9164626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460022.1;locus_tag=O5D79_003177;product=tail assembly protein;protein_id=HJH9164626.1;transl_table=11 DALFDJ020000016.1 tpg pseudogene 103053 105501 . + . ID=gene-O5D79_003178;Name=O5D79_003178;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003178;pseudo=true DALFDJ020000016.1 Protein Homology CDS 103053 105501 . + 0 ID=cds-O5D79_003178;Parent=gene-O5D79_003178;Note=frameshifted;Ontology_term=GO:0019062,GO:0046813,GO:0098003,GO:0098015;gbkey=CDS;go_component=virus tail|0098015||IEA;go_process=virion attachment to host cell|0019062||IEA,receptor-mediated virion attachment to host cell|0046813||IEA,viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460023.1;locus_tag=O5D79_003178;product=host specificity protein J;pseudo=true;transl_table=11 DALFDJ020000016.1 tpg pseudogene 105630 106403 . + . ID=gene-O5D79_003179;Name=O5D79_003179;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003179;pseudo=true DALFDJ020000016.1 Protein Homology CDS 105630 106403 . + 0 ID=cds-O5D79_003179;Parent=gene-O5D79_003179;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020885.6;locus_tag=O5D79_003179;product=phage tail tip fiber protein;pseudo=true;transl_table=11 DALFDJ020000016.1 tpg gene 106442 106684 . + . ID=gene-O5D79_003180;Name=O5D79_003180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003180 DALFDJ020000016.1 Protein Homology CDS 106442 106684 . + 0 ID=cds-HJH9164627.1;Parent=gene-O5D79_003180;Dbxref=NCBI_GP:HJH9164627.1;Name=HJH9164627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178849.1;locus_tag=O5D79_003180;product=hypothetical protein;protein_id=HJH9164627.1;transl_table=11 DALFDJ020000016.1 tpg pseudogene 106738 109416 . + . ID=gene-O5D79_003181;Name=O5D79_003181;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003181;pseudo=true DALFDJ020000016.1 Protein Homology CDS 106738 109416 . + 0 ID=cds-O5D79_003181;Parent=gene-O5D79_003181;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264264.1;locus_tag=O5D79_003181;product=prophage tail fiber N-terminal domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000016.1 tpg gene 109431 109949 . + . ID=gene-O5D79_003182;Name=O5D79_003182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003182 DALFDJ020000016.1 Protein Homology CDS 109431 109949 . + 0 ID=cds-HJH9164628.1;Parent=gene-O5D79_003182;Dbxref=NCBI_GP:HJH9164628.1;Name=HJH9164628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421109.1;locus_tag=O5D79_003182;product=tail fiber assembly protein;protein_id=HJH9164628.1;transl_table=11 DALFDJ020000016.1 tpg gene 110260 110361 . - . ID=gene-O5D79_003183;Name=O5D79_003183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003183 DALFDJ020000016.1 Protein Homology CDS 110260 110361 . - 0 ID=cds-HJH9164629.1;Parent=gene-O5D79_003183;Dbxref=NCBI_GP:HJH9164629.1;Name=HJH9164629.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026627.6;locus_tag=O5D79_003183;product=PagK family vesicle-borne virulence factor;protein_id=HJH9164629.1;transl_table=11 DALFDJ020000016.1 tpg pseudogene 110397 110507 . + . ID=gene-O5D79_003184;Name=O5D79_003184;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003184;pseudo=true DALFDJ020000016.1 Protein Homology CDS 110397 110507 . + 0 ID=cds-O5D79_003184;Parent=gene-O5D79_003184;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=O5D79_003184;product=hypothetical protein;pseudo=true;transl_table=11 DALFDJ020000016.1 tpg pseudogene 110586 110804 . - . ID=gene-O5D79_003185;Name=O5D79_003185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003185;pseudo=true DALFDJ020000016.1 Protein Homology CDS 110586 110804 . - 0 ID=cds-O5D79_003185;Parent=gene-O5D79_003185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505044.1;locus_tag=O5D79_003185;product=tail fiber assembly protein;pseudo=true;transl_table=11 DALFDJ020000016.1 tpg gene 111064 113070 . + . ID=gene-O5D79_003186;Name=O5D79_003186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003186 DALFDJ020000016.1 Protein Homology CDS 111064 113070 . + 0 ID=cds-HJH9164630.1;Parent=gene-O5D79_003186;Dbxref=NCBI_GP:HJH9164630.1;Name=HJH9164630.1;Ontology_term=GO:0016567,GO:0004842;gbkey=CDS;go_function=ubiquitin-protein transferase activity|0004842||IEA;go_process=protein ubiquitination|0016567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461184.1;locus_tag=O5D79_003186;product=NEL-type E3 ubiquitin ligase domain-containing protein;protein_id=HJH9164630.1;transl_table=11 DALFDJ020000016.1 tpg pseudogene 113166 113388 . + . ID=gene-O5D79_003187;Name=O5D79_003187;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003187;pseudo=true DALFDJ020000016.1 Protein Homology CDS 113166 113388 . + 0 ID=cds-O5D79_003187;Parent=gene-O5D79_003187;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460948.1;locus_tag=O5D79_003187;product=DUF4113 domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000016.1 tpg gene 113381 114052 . - . ID=gene-O5D79_003188;Name=O5D79_003188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003188 DALFDJ020000016.1 Protein Homology CDS 113381 114052 . - 0 ID=cds-HJH9164631.1;Parent=gene-O5D79_003188;Dbxref=NCBI_GP:HJH9164631.1;Name=HJH9164631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000334630.1;locus_tag=O5D79_003188;product=SOS response-associated peptidase;protein_id=HJH9164631.1;transl_table=11 DALFDJ020000016.1 tpg pseudogene 114351 114518 . + . ID=gene-O5D79_003189;Name=O5D79_003189;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003189;pseudo=true DALFDJ020000016.1 Protein Homology CDS 114351 114518 . + 0 ID=cds-O5D79_003189;Parent=gene-O5D79_003189;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=O5D79_003189;product=isocitrate/isopropylmalate family dehydrogenase;pseudo=true;transl_table=11 ##sequence-region DALFDJ020000017.1 1 113030 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000017.1 tpg region 1 113030 . + . ID=DALFDJ020000017.1:1..113030;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000017.1 tpg gene 181 804 . + . ID=gene-O5D79_003190;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=O5D79_003190 DALFDJ020000017.1 Protein Homology CDS 181 804 . + 0 ID=cds-HJH9164632.1;Parent=gene-O5D79_003190;Dbxref=NCBI_GP:HJH9164632.1;Name=HJH9164632.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=O5D79_003190;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=HJH9164632.1;transl_table=11 DALFDJ020000017.1 tpg gene 1056 2327 . + . ID=gene-O5D79_003191;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=O5D79_003191 DALFDJ020000017.1 Protein Homology CDS 1056 2327 . + 0 ID=cds-HJH9164633.1;Parent=gene-O5D79_003191;Dbxref=NCBI_GP:HJH9164633.1;Name=HJH9164633.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=O5D79_003191;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=HJH9164633.1;transl_table=11 DALFDJ020000017.1 tpg gene 2513 4867 . + . ID=gene-O5D79_003192;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=O5D79_003192 DALFDJ020000017.1 Protein Homology CDS 2513 4867 . + 0 ID=cds-HJH9164634.1;Parent=gene-O5D79_003192;Dbxref=NCBI_GP:HJH9164634.1;Name=HJH9164634.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=O5D79_003192;product=endopeptidase La;protein_id=HJH9164634.1;transl_table=11 DALFDJ020000017.1 tpg gene 5058 5348 . + . ID=gene-O5D79_003193;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=O5D79_003193 DALFDJ020000017.1 Protein Homology CDS 5058 5348 . + 0 ID=cds-HJH9164635.1;Parent=gene-O5D79_003193;Dbxref=NCBI_GP:HJH9164635.1;Name=HJH9164635.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=O5D79_003193;product=nucleoid-associated protein HU-beta;protein_id=HJH9164635.1;transl_table=11 DALFDJ020000017.1 tpg gene 5639 7510 . + . ID=gene-O5D79_003194;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=O5D79_003194 DALFDJ020000017.1 Protein Homology CDS 5639 7510 . + 0 ID=cds-HJH9164636.1;Parent=gene-O5D79_003194;Dbxref=NCBI_GP:HJH9164636.1;Name=HJH9164636.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459448.1;locus_tag=O5D79_003194;product=peptidylprolyl isomerase;protein_id=HJH9164636.1;transl_table=11 DALFDJ020000017.1 tpg gene 7660 8034 . + . ID=gene-O5D79_003195;Name=O5D79_003195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003195 DALFDJ020000017.1 Protein Homology CDS 7660 8034 . + 0 ID=cds-HJH9164637.1;Parent=gene-O5D79_003195;Dbxref=NCBI_GP:HJH9164637.1;Name=HJH9164637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459449.1;locus_tag=O5D79_003195;product=helix-hairpin-helix domain-containing protein;protein_id=HJH9164637.1;transl_table=11 DALFDJ020000017.1 tpg gene 8138 8536 . + . ID=gene-O5D79_003196;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=O5D79_003196 DALFDJ020000017.1 Protein Homology CDS 8138 8536 . + 0 ID=cds-HJH9164638.1;Parent=gene-O5D79_003196;Dbxref=NCBI_GP:HJH9164638.1;Name=HJH9164638.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459450.1;locus_tag=O5D79_003196;product=long-chain acyl-CoA thioesterase FadM;protein_id=HJH9164638.1;transl_table=11 DALFDJ020000017.1 tpg gene 8642 9337 . - . ID=gene-O5D79_003197;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=O5D79_003197 DALFDJ020000017.1 Protein Homology CDS 8642 9337 . - 0 ID=cds-HJH9164639.1;Parent=gene-O5D79_003197;Dbxref=NCBI_GP:HJH9164639.1;Name=HJH9164639.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459451.1;locus_tag=O5D79_003197;product=7-cyano-7-deazaguanine synthase QueC;protein_id=HJH9164639.1;transl_table=11 DALFDJ020000017.1 tpg gene 9402 11102 . - . ID=gene-O5D79_003198;Name=O5D79_003198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003198 DALFDJ020000017.1 Protein Homology CDS 9402 11102 . - 0 ID=cds-HJH9164640.1;Parent=gene-O5D79_003198;Dbxref=NCBI_GP:HJH9164640.1;Name=HJH9164640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459452.1;locus_tag=O5D79_003198;product=SgrR family transcriptional regulator;protein_id=HJH9164640.1;transl_table=11 DALFDJ020000017.1 tpg gene 11203 12021 . + . ID=gene-O5D79_003199;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=O5D79_003199 DALFDJ020000017.1 Protein Homology CDS 11203 12021 . + 0 ID=cds-HJH9164641.1;Parent=gene-O5D79_003199;Dbxref=NCBI_GP:HJH9164641.1;Name=HJH9164641.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=O5D79_003199;product=HMP-PP phosphatase;protein_id=HJH9164641.1;transl_table=11 DALFDJ020000017.1 tpg gene 12070 13125 . - . ID=gene-O5D79_003200;Name=cdsH;gbkey=Gene;gene=cdsH;gene_biotype=protein_coding;locus_tag=O5D79_003200 DALFDJ020000017.1 Protein Homology CDS 12070 13125 . - 0 ID=cds-HJH9164642.1;Parent=gene-O5D79_003200;Dbxref=NCBI_GP:HJH9164642.1;Name=HJH9164642.1;gbkey=CDS;gene=cdsH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459454.1;locus_tag=O5D79_003200;product=cysteine desulfhydrase;protein_id=HJH9164642.1;transl_table=11 DALFDJ020000017.1 tpg gene 13238 13696 . + . ID=gene-O5D79_003201;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=O5D79_003201 DALFDJ020000017.1 Protein Homology CDS 13238 13696 . + 0 ID=cds-HJH9164643.1;Parent=gene-O5D79_003201;Dbxref=NCBI_GP:HJH9164643.1;Name=HJH9164643.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459455.1;locus_tag=O5D79_003201;product=DNA-binding transcriptional regulator DecR;protein_id=HJH9164643.1;transl_table=11 DALFDJ020000017.1 tpg gene 13737 15509 . + . ID=gene-O5D79_003202;Name=O5D79_003202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003202 DALFDJ020000017.1 Protein Homology CDS 13737 15509 . + 0 ID=cds-HJH9164644.1;Parent=gene-O5D79_003202;Dbxref=NCBI_GP:HJH9164644.1;Name=HJH9164644.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459456.1;locus_tag=O5D79_003202;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=HJH9164644.1;transl_table=11 DALFDJ020000017.1 tpg gene 15502 17283 . + . ID=gene-O5D79_003203;Name=O5D79_003203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003203 DALFDJ020000017.1 Protein Homology CDS 15502 17283 . + 0 ID=cds-HJH9164645.1;Parent=gene-O5D79_003203;Dbxref=NCBI_GP:HJH9164645.1;Name=HJH9164645.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459457.1;locus_tag=O5D79_003203;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=HJH9164645.1;transl_table=11 DALFDJ020000017.1 tpg gene 17496 17834 . + . ID=gene-O5D79_003204;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=O5D79_003204 DALFDJ020000017.1 Protein Homology CDS 17496 17834 . + 0 ID=cds-HJH9164646.1;Parent=gene-O5D79_003204;Dbxref=NCBI_GP:HJH9164646.1;Name=HJH9164646.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459458.1;locus_tag=O5D79_003204;product=P-II family nitrogen regulator;protein_id=HJH9164646.1;transl_table=11 DALFDJ020000017.1 tpg gene 17866 19152 . + . ID=gene-O5D79_003205;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=O5D79_003205 DALFDJ020000017.1 Protein Homology CDS 17866 19152 . + 0 ID=cds-HJH9164647.1;Parent=gene-O5D79_003205;Dbxref=NCBI_GP:HJH9164647.1;Name=HJH9164647.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459459.1;locus_tag=O5D79_003205;product=ammonium transporter AmtB;protein_id=HJH9164647.1;transl_table=11 DALFDJ020000017.1 tpg gene 19252 20112 . - . ID=gene-O5D79_003206;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=O5D79_003206 DALFDJ020000017.1 Protein Homology CDS 19252 20112 . - 0 ID=cds-HJH9164648.1;Parent=gene-O5D79_003206;Dbxref=NCBI_GP:HJH9164648.1;Name=HJH9164648.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459460.1;locus_tag=O5D79_003206;product=acyl-CoA thioesterase II;protein_id=HJH9164648.1;transl_table=11 DALFDJ020000017.1 tpg gene 20327 20896 . + . ID=gene-O5D79_003207;Name=O5D79_003207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003207 DALFDJ020000017.1 Protein Homology CDS 20327 20896 . + 0 ID=cds-HJH9164649.1;Parent=gene-O5D79_003207;Dbxref=NCBI_GP:HJH9164649.1;Name=HJH9164649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459461.1;locus_tag=O5D79_003207;product=YbaY family lipoprotein;protein_id=HJH9164649.1;transl_table=11 DALFDJ020000017.1 tpg gene 20929 21318 . - . ID=gene-O5D79_003208;Name=O5D79_003208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003208 DALFDJ020000017.1 Protein Homology CDS 20929 21318 . - 0 ID=cds-HJH9164650.1;Parent=gene-O5D79_003208;Dbxref=NCBI_GP:HJH9164650.1;Name=HJH9164650.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459462.1;locus_tag=O5D79_003208;product=MGMT family protein;protein_id=HJH9164650.1;transl_table=11 DALFDJ020000017.1 tpg gene 21403 21499 . + . ID=gene-O5D79_003209;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=O5D79_003209 DALFDJ020000017.1 cmsearch SRP_RNA 21403 21499 . + . ID=rna-O5D79_003209;Parent=gene-O5D79_003209;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_003209;product=signal recognition particle sRNA small type DALFDJ020000017.1 cmsearch exon 21403 21499 . + . ID=exon-O5D79_003209-1;Parent=rna-O5D79_003209;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_003209;product=signal recognition particle sRNA small type DALFDJ020000017.1 tpg gene 21549 23099 . - . ID=gene-O5D79_003210;Name=O5D79_003210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003210 DALFDJ020000017.1 Protein Homology CDS 21549 23099 . - 0 ID=cds-HJH9164651.1;Parent=gene-O5D79_003210;Dbxref=NCBI_GP:HJH9164651.1;Name=HJH9164651.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459463.1;locus_tag=O5D79_003210;product=EAL domain-containing protein;protein_id=HJH9164651.1;transl_table=11 DALFDJ020000017.1 tpg gene 23324 23587 . + . ID=gene-O5D79_003211;Name=O5D79_003211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003211 DALFDJ020000017.1 Protein Homology CDS 23324 23587 . + 0 ID=cds-HJH9164652.1;Parent=gene-O5D79_003211;Dbxref=NCBI_GP:HJH9164652.1;Name=HJH9164652.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801422.1;locus_tag=O5D79_003211;product=type B 50S ribosomal protein L31;protein_id=HJH9164652.1;transl_table=11 DALFDJ020000017.1 tpg gene 23589 23729 . + . ID=gene-O5D79_003212;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=O5D79_003212 DALFDJ020000017.1 Protein Homology CDS 23589 23729 . + 0 ID=cds-HJH9164653.1;Parent=gene-O5D79_003212;Dbxref=NCBI_GP:HJH9164653.1;Name=HJH9164653.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=O5D79_003212;product=type B 50S ribosomal protein L36;protein_id=HJH9164653.1;transl_table=11 DALFDJ020000017.1 tpg gene 23786 24256 . - . ID=gene-O5D79_003213;Name=O5D79_003213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003213 DALFDJ020000017.1 Protein Homology CDS 23786 24256 . - 0 ID=cds-HJH9164654.1;Parent=gene-O5D79_003213;Dbxref=NCBI_GP:HJH9164654.1;Name=HJH9164654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459466.1;locus_tag=O5D79_003213;product=YlaC family protein;protein_id=HJH9164654.1;transl_table=11 DALFDJ020000017.1 tpg gene 24374 24925 . - . ID=gene-O5D79_003214;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=O5D79_003214 DALFDJ020000017.1 Protein Homology CDS 24374 24925 . - 0 ID=cds-HJH9164655.1;Parent=gene-O5D79_003214;Dbxref=NCBI_GP:HJH9164655.1;Name=HJH9164655.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459467.1;locus_tag=O5D79_003214;product=maltose O-acetyltransferase;protein_id=HJH9164655.1;transl_table=11 DALFDJ020000017.1 tpg gene 25104 25322 . - . ID=gene-O5D79_003215;Name=O5D79_003215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003215 DALFDJ020000017.1 Protein Homology CDS 25104 25322 . - 0 ID=cds-HJH9164656.1;Parent=gene-O5D79_003215;Dbxref=NCBI_GP:HJH9164656.1;Name=HJH9164656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459468.1;locus_tag=O5D79_003215;product=HHA domain-containing protein;protein_id=HJH9164656.1;transl_table=11 DALFDJ020000017.1 tpg gene 25350 25724 . - . ID=gene-O5D79_003216;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=O5D79_003216 DALFDJ020000017.1 Protein Homology CDS 25350 25724 . - 0 ID=cds-HJH9164657.1;Parent=gene-O5D79_003216;Dbxref=NCBI_GP:HJH9164657.1;Name=HJH9164657.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=O5D79_003216;product=Hha toxicity modulator TomB;protein_id=HJH9164657.1;transl_table=11 DALFDJ020000017.1 tpg gene 26220 29369 . - . ID=gene-O5D79_003217;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=O5D79_003217 DALFDJ020000017.1 Protein Homology CDS 26220 29369 . - 0 ID=cds-HJH9164658.1;Parent=gene-O5D79_003217;Dbxref=NCBI_GP:HJH9164658.1;Name=HJH9164658.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459470.1;locus_tag=O5D79_003217;product=efflux RND transporter permease AcrB;protein_id=HJH9164658.1;transl_table=11 DALFDJ020000017.1 tpg gene 29392 30585 . - . ID=gene-O5D79_003218;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=O5D79_003218 DALFDJ020000017.1 Protein Homology CDS 29392 30585 . - 0 ID=cds-HJH9164659.1;Parent=gene-O5D79_003218;Dbxref=NCBI_GP:HJH9164659.1;Name=HJH9164659.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459471.1;locus_tag=O5D79_003218;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=HJH9164659.1;transl_table=11 DALFDJ020000017.1 tpg gene 30727 31380 . + . ID=gene-O5D79_003219;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=O5D79_003219 DALFDJ020000017.1 Protein Homology CDS 30727 31380 . + 0 ID=cds-HJH9164660.1;Parent=gene-O5D79_003219;Dbxref=NCBI_GP:HJH9164660.1;Name=HJH9164660.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459472.1;locus_tag=O5D79_003219;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=HJH9164660.1;transl_table=11 DALFDJ020000017.1 tpg gene 31499 34861 . + . ID=gene-O5D79_003220;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=O5D79_003220 DALFDJ020000017.1 Protein Homology CDS 31499 34861 . + 0 ID=cds-HJH9164661.1;Parent=gene-O5D79_003220;Dbxref=NCBI_GP:HJH9164661.1;Name=HJH9164661.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459473.1;locus_tag=O5D79_003220;product=mechanosensitive channel MscK;protein_id=HJH9164661.1;transl_table=11 DALFDJ020000017.1 tpg gene 34903 35838 . - . ID=gene-O5D79_003221;Name=O5D79_003221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003221 DALFDJ020000017.1 Protein Homology CDS 34903 35838 . - 0 ID=cds-HJH9164662.1;Parent=gene-O5D79_003221;Dbxref=NCBI_GP:HJH9164662.1;Name=HJH9164662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459474.1;locus_tag=O5D79_003221;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=HJH9164662.1;transl_table=11 DALFDJ020000017.1 tpg gene 35908 36075 . - . ID=gene-O5D79_003222;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=O5D79_003222 DALFDJ020000017.1 Protein Homology CDS 35908 36075 . - 0 ID=cds-HJH9164663.1;Parent=gene-O5D79_003222;Dbxref=NCBI_GP:HJH9164663.1;Name=HJH9164663.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459475.1;locus_tag=O5D79_003222;product=pleiotropic regulatory protein RsmS;protein_id=HJH9164663.1;transl_table=11 DALFDJ020000017.1 tpg gene 36089 36616 . - . ID=gene-O5D79_003223;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=O5D79_003223 DALFDJ020000017.1 Protein Homology CDS 36089 36616 . - 0 ID=cds-HJH9164664.1;Parent=gene-O5D79_003223;Dbxref=NCBI_GP:HJH9164664.1;Name=HJH9164664.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001454692.1;locus_tag=O5D79_003223;product=primosomal replication protein N'';protein_id=HJH9164664.1;transl_table=11 DALFDJ020000017.1 tpg gene 36685 37062 . + . ID=gene-O5D79_003224;Name=O5D79_003224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003224 DALFDJ020000017.1 Protein Homology CDS 36685 37062 . + 0 ID=cds-HJH9164665.1;Parent=gene-O5D79_003224;Dbxref=NCBI_GP:HJH9164665.1;Name=HJH9164665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459477.1;locus_tag=O5D79_003224;product=DUF454 family protein;protein_id=HJH9164665.1;transl_table=11 DALFDJ020000017.1 tpg gene 37215 37766 . + . ID=gene-O5D79_003225;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=O5D79_003225 DALFDJ020000017.1 Protein Homology CDS 37215 37766 . + 0 ID=cds-HJH9164666.1;Parent=gene-O5D79_003225;Dbxref=NCBI_GP:HJH9164666.1;Name=HJH9164666.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=O5D79_003225;product=adenine phosphoribosyltransferase;protein_id=HJH9164666.1;transl_table=11 DALFDJ020000017.1 tpg gene 37880 39808 . + . ID=gene-O5D79_003226;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=O5D79_003226 DALFDJ020000017.1 Protein Homology CDS 37880 39808 . + 0 ID=cds-HJH9164667.1;Parent=gene-O5D79_003226;Dbxref=NCBI_GP:HJH9164667.1;Name=HJH9164667.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=O5D79_003226;product=DNA polymerase III subunit gamma/tau;protein_id=HJH9164667.1;transl_table=11 DALFDJ020000017.1 cmsearch sequence_feature 39141 39205 . + . ID=id-O5D79_003226;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_003226 DALFDJ020000017.1 tpg gene 39854 40183 . + . ID=gene-O5D79_003227;Name=O5D79_003227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003227 DALFDJ020000017.1 Protein Homology CDS 39854 40183 . + 0 ID=cds-HJH9164668.1;Parent=gene-O5D79_003227;Dbxref=NCBI_GP:HJH9164668.1;Name=HJH9164668.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=O5D79_003227;product=YbaB/EbfC family nucleoid-associated protein;protein_id=HJH9164668.1;transl_table=11 DALFDJ020000017.1 tpg gene 40183 40788 . + . ID=gene-O5D79_003228;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=O5D79_003228 DALFDJ020000017.1 Protein Homology CDS 40183 40788 . + 0 ID=cds-HJH9164669.1;Parent=gene-O5D79_003228;Dbxref=NCBI_GP:HJH9164669.1;Name=HJH9164669.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459481.1;locus_tag=O5D79_003228;product=recombination mediator RecR;protein_id=HJH9164669.1;transl_table=11 DALFDJ020000017.1 tpg gene 40899 42773 . + . ID=gene-O5D79_003229;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=O5D79_003229 DALFDJ020000017.1 Protein Homology CDS 40899 42773 . + 0 ID=cds-HJH9164670.1;Parent=gene-O5D79_003229;Dbxref=NCBI_GP:HJH9164670.1;Name=HJH9164670.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=O5D79_003229;product=molecular chaperone HtpG;protein_id=HJH9164670.1;transl_table=11 DALFDJ020000017.1 tpg gene 43189 43833 . + . ID=gene-O5D79_003230;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=O5D79_003230 DALFDJ020000017.1 Protein Homology CDS 43189 43833 . + 0 ID=cds-HJH9164671.1;Parent=gene-O5D79_003230;Dbxref=NCBI_GP:HJH9164671.1;Name=HJH9164671.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=O5D79_003230;product=adenylate kinase;protein_id=HJH9164671.1;transl_table=11 DALFDJ020000017.1 tpg gene 44062 45024 . + . ID=gene-O5D79_003231;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=O5D79_003231 DALFDJ020000017.1 Protein Homology CDS 44062 45024 . + 0 ID=cds-HJH9164672.1;Parent=gene-O5D79_003231;Dbxref=NCBI_GP:HJH9164672.1;Name=HJH9164672.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459484.1;locus_tag=O5D79_003231;product=ferrochelatase;protein_id=HJH9164672.1;transl_table=11 DALFDJ020000017.1 tpg gene 45021 45992 . - . ID=gene-O5D79_003232;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=O5D79_003232 DALFDJ020000017.1 Protein Homology CDS 45021 45992 . - 0 ID=cds-HJH9164673.1;Parent=gene-O5D79_003232;Dbxref=NCBI_GP:HJH9164673.1;Name=HJH9164673.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459485.1;locus_tag=O5D79_003232;product=acetyl esterase;protein_id=HJH9164673.1;transl_table=11 DALFDJ020000017.1 tpg gene 46145 47449 . + . ID=gene-O5D79_003233;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=O5D79_003233 DALFDJ020000017.1 Protein Homology CDS 46145 47449 . + 0 ID=cds-HJH9164674.1;Parent=gene-O5D79_003233;Dbxref=NCBI_GP:HJH9164674.1;Name=HJH9164674.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459486.1;locus_tag=O5D79_003233;product=inosine/guanosine kinase;protein_id=HJH9164674.1;transl_table=11 DALFDJ020000017.1 tpg gene 47498 49174 . - . ID=gene-O5D79_003234;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=O5D79_003234 DALFDJ020000017.1 Protein Homology CDS 47498 49174 . - 0 ID=cds-HJH9164675.1;Parent=gene-O5D79_003234;Dbxref=NCBI_GP:HJH9164675.1;Name=HJH9164675.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459487.1;locus_tag=O5D79_003234;product=YbaL family putative K(+) efflux transporter;protein_id=HJH9164675.1;transl_table=11 DALFDJ020000017.1 tpg gene 49389 50609 . - . ID=gene-O5D79_003235;Name=O5D79_003235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003235 DALFDJ020000017.1 Protein Homology CDS 49389 50609 . - 0 ID=cds-HJH9164676.1;Parent=gene-O5D79_003235;Dbxref=NCBI_GP:HJH9164676.1;Name=HJH9164676.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=O5D79_003235;product=MFS transporter;protein_id=HJH9164676.1;transl_table=11 DALFDJ020000017.1 tpg gene 50782 52434 . + . ID=gene-O5D79_003236;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=O5D79_003236 DALFDJ020000017.1 Protein Homology CDS 50782 52434 . + 0 ID=cds-HJH9164677.1;Parent=gene-O5D79_003236;Dbxref=NCBI_GP:HJH9164677.1;Name=HJH9164677.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459489.1;locus_tag=O5D79_003236;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=HJH9164677.1;transl_table=11 DALFDJ020000017.1 tpg gene 52551 53030 . - . ID=gene-O5D79_003237;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=O5D79_003237 DALFDJ020000017.1 Protein Homology CDS 52551 53030 . - 0 ID=cds-HJH9164678.1;Parent=gene-O5D79_003237;Dbxref=NCBI_GP:HJH9164678.1;Name=HJH9164678.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=O5D79_003237;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=HJH9164678.1;transl_table=11 DALFDJ020000017.1 tpg gene 53232 54026 . - . ID=gene-O5D79_003238;Name=O5D79_003238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003238 DALFDJ020000017.1 Protein Homology CDS 53232 54026 . - 0 ID=cds-HJH9164679.1;Parent=gene-O5D79_003238;Dbxref=NCBI_GP:HJH9164679.1;Name=HJH9164679.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459491.1;locus_tag=O5D79_003238;product=TraB/GumN family protein;protein_id=HJH9164679.1;transl_table=11 DALFDJ020000017.1 tpg gene 54112 54939 . - . ID=gene-O5D79_003239;Name=O5D79_003239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003239 DALFDJ020000017.1 Protein Homology CDS 54112 54939 . - 0 ID=cds-HJH9164680.1;Parent=gene-O5D79_003239;Dbxref=NCBI_GP:HJH9164680.1;Name=HJH9164680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459492.1;locus_tag=O5D79_003239;product=lysozyme inhibitor LprI family protein;protein_id=HJH9164680.1;transl_table=11 DALFDJ020000017.1 tpg gene 55096 57597 . - . ID=gene-O5D79_003240;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=O5D79_003240 DALFDJ020000017.1 Protein Homology CDS 55096 57597 . - 0 ID=cds-HJH9164681.1;Parent=gene-O5D79_003240;Dbxref=NCBI_GP:HJH9164681.1;Name=HJH9164681.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=O5D79_003240;product=copper-exporting P-type ATPase CopA;protein_id=HJH9164681.1;transl_table=11 DALFDJ020000017.1 tpg gene 57707 58123 . + . ID=gene-O5D79_003241;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=O5D79_003241 DALFDJ020000017.1 Protein Homology CDS 57707 58123 . + 0 ID=cds-HJH9164682.1;Parent=gene-O5D79_003241;Dbxref=NCBI_GP:HJH9164682.1;Name=HJH9164682.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459494.1;locus_tag=O5D79_003241;product=Cu(I)-responsive transcriptional regulator;protein_id=HJH9164682.1;transl_table=11 DALFDJ020000017.1 tpg gene 58124 58576 . - . ID=gene-O5D79_003242;Name=O5D79_003242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003242 DALFDJ020000017.1 Protein Homology CDS 58124 58576 . - 0 ID=cds-HJH9164683.1;Parent=gene-O5D79_003242;Dbxref=NCBI_GP:HJH9164683.1;Name=HJH9164683.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459495.1;locus_tag=O5D79_003242;product=NfeD family protein;protein_id=HJH9164683.1;transl_table=11 DALFDJ020000017.1 tpg gene 58573 59490 . - . ID=gene-O5D79_003243;Name=O5D79_003243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003243 DALFDJ020000017.1 Protein Homology CDS 58573 59490 . - 0 ID=cds-HJH9164684.1;Parent=gene-O5D79_003243;Dbxref=NCBI_GP:HJH9164684.1;Name=HJH9164684.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459496.1;locus_tag=O5D79_003243;product=SPFH domain-containing protein;protein_id=HJH9164684.1;transl_table=11 DALFDJ020000017.1 tpg gene 59637 60314 . + . ID=gene-O5D79_003244;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=O5D79_003244 DALFDJ020000017.1 Protein Homology CDS 59637 60314 . + 0 ID=cds-HJH9164685.1;Parent=gene-O5D79_003244;Dbxref=NCBI_GP:HJH9164685.1;Name=HJH9164685.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459497.1;locus_tag=O5D79_003244;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=HJH9164685.1;transl_table=11 DALFDJ020000017.1 tpg gene 60301 61080 . + . ID=gene-O5D79_003245;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=O5D79_003245 DALFDJ020000017.1 Protein Homology CDS 60301 61080 . + 0 ID=cds-HJH9164686.1;Parent=gene-O5D79_003245;Dbxref=NCBI_GP:HJH9164686.1;Name=HJH9164686.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459498.1;locus_tag=O5D79_003245;product=iron efflux ABC transporter permease subunit FetB;protein_id=HJH9164686.1;transl_table=11 DALFDJ020000017.1 tpg gene 61166 62020 . - . ID=gene-O5D79_003246;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=O5D79_003246 DALFDJ020000017.1 Protein Homology CDS 61166 62020 . - 0 ID=cds-HJH9164687.1;Parent=gene-O5D79_003246;Dbxref=NCBI_GP:HJH9164687.1;Name=HJH9164687.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459499.1;locus_tag=O5D79_003246;product=chaperedoxin;protein_id=HJH9164687.1;transl_table=11 DALFDJ020000017.1 tpg gene 62080 62850 . - . ID=gene-O5D79_003247;Name=O5D79_003247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003247 DALFDJ020000017.1 Protein Homology CDS 62080 62850 . - 0 ID=cds-HJH9164688.1;Parent=gene-O5D79_003247;Dbxref=NCBI_GP:HJH9164688.1;Name=HJH9164688.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459500.1;locus_tag=O5D79_003247;product=SDR family oxidoreductase;protein_id=HJH9164688.1;transl_table=11 DALFDJ020000017.1 tpg gene 63005 63619 . - . ID=gene-O5D79_003248;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=O5D79_003248 DALFDJ020000017.1 Protein Homology CDS 63005 63619 . - 0 ID=cds-HJH9164689.1;Parent=gene-O5D79_003248;Dbxref=NCBI_GP:HJH9164689.1;Name=HJH9164689.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459501.1;locus_tag=O5D79_003248;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=HJH9164689.1;transl_table=11 DALFDJ020000017.1 tpg gene 63590 64276 . + . ID=gene-O5D79_003249;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=O5D79_003249 DALFDJ020000017.1 Protein Homology CDS 63590 64276 . + 0 ID=cds-HJH9164690.1;Parent=gene-O5D79_003249;Dbxref=NCBI_GP:HJH9164690.1;Name=HJH9164690.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459502.1;locus_tag=O5D79_003249;product=putative ABC transporter ATP-binding protein YbbA;protein_id=HJH9164690.1;transl_table=11 DALFDJ020000017.1 tpg gene 64273 66687 . + . ID=gene-O5D79_003250;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=O5D79_003250 DALFDJ020000017.1 Protein Homology CDS 64273 66687 . + 0 ID=cds-HJH9164691.1;Parent=gene-O5D79_003250;Dbxref=NCBI_GP:HJH9164691.1;Name=HJH9164691.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459503.1;locus_tag=O5D79_003250;product=putative ABC transporter permease subunit YbbP;protein_id=HJH9164691.1;transl_table=11 DALFDJ020000017.1 tpg gene 66873 68006 . + . ID=gene-O5D79_003251;Name=O5D79_003251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003251 DALFDJ020000017.1 Protein Homology CDS 66873 68006 . + 0 ID=cds-HJH9164692.1;Parent=gene-O5D79_003251;Dbxref=NCBI_GP:HJH9164692.1;Name=HJH9164692.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=O5D79_003251;product=porin;protein_id=HJH9164692.1;transl_table=11 DALFDJ020000017.1 tpg gene 68263 69093 . + . ID=gene-O5D79_003252;Name=O5D79_003252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003252 DALFDJ020000017.1 Protein Homology CDS 68263 69093 . + 0 ID=cds-HJH9164693.1;Parent=gene-O5D79_003252;Dbxref=NCBI_GP:HJH9164693.1;Name=HJH9164693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459505.1;locus_tag=O5D79_003252;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=HJH9164693.1;transl_table=11 DALFDJ020000017.1 tpg gene 69130 70146 . + . ID=gene-O5D79_003253;Name=sfbB;gbkey=Gene;gene=sfbB;gene_biotype=protein_coding;locus_tag=O5D79_003253 DALFDJ020000017.1 Protein Homology CDS 69130 70146 . + 0 ID=cds-HJH9164694.1;Parent=gene-O5D79_003253;Dbxref=NCBI_GP:HJH9164694.1;Name=HJH9164694.1;gbkey=CDS;gene=sfbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459506.1;locus_tag=O5D79_003253;product=virulence-associated ABC transporter ATP-binding protein SfbB;protein_id=HJH9164694.1;transl_table=11 DALFDJ020000017.1 tpg gene 70139 70798 . + . ID=gene-O5D79_003254;Name=O5D79_003254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003254 DALFDJ020000017.1 Protein Homology CDS 70139 70798 . + 0 ID=cds-HJH9164695.1;Parent=gene-O5D79_003254;Dbxref=NCBI_GP:HJH9164695.1;Name=HJH9164695.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459507.1;locus_tag=O5D79_003254;product=methionine ABC transporter permease;protein_id=HJH9164695.1;transl_table=11 DALFDJ020000017.1 tpg gene 70837 71931 . - . ID=gene-O5D79_003255;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=O5D79_003255 DALFDJ020000017.1 Protein Homology CDS 70837 71931 . - 0 ID=cds-HJH9164696.1;Parent=gene-O5D79_003255;Dbxref=NCBI_GP:HJH9164696.1;Name=HJH9164696.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459508.1;locus_tag=O5D79_003255;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=HJH9164696.1;transl_table=11 DALFDJ020000017.1 tpg gene 72001 72927 . - . ID=gene-O5D79_003256;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=O5D79_003256 DALFDJ020000017.1 Protein Homology CDS 72001 72927 . - 0 ID=cds-HJH9164697.1;Parent=gene-O5D79_003256;Dbxref=NCBI_GP:HJH9164697.1;Name=HJH9164697.1;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459509.1;locus_tag=O5D79_003256;product=HTH-type transcriptional activator AllS;protein_id=HJH9164697.1;transl_table=11 DALFDJ020000017.1 tpg gene 73154 73636 . + . ID=gene-O5D79_003257;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=O5D79_003257 DALFDJ020000017.1 Protein Homology CDS 73154 73636 . + 0 ID=cds-HJH9164698.1;Parent=gene-O5D79_003257;Dbxref=NCBI_GP:HJH9164698.1;Name=HJH9164698.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459510.1;locus_tag=O5D79_003257;product=ureidoglycolate lyase;protein_id=HJH9164698.1;transl_table=11 DALFDJ020000017.1 tpg gene 73715 74533 . + . ID=gene-O5D79_003258;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=O5D79_003258 DALFDJ020000017.1 Protein Homology CDS 73715 74533 . + 0 ID=cds-HJH9164699.1;Parent=gene-O5D79_003258;Dbxref=NCBI_GP:HJH9164699.1;Name=HJH9164699.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459511.1;locus_tag=O5D79_003258;product=HTH-type transcriptional repressor AllR;protein_id=HJH9164699.1;transl_table=11 DALFDJ020000017.1 tpg gene 74618 76399 . + . ID=gene-O5D79_003259;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=O5D79_003259 DALFDJ020000017.1 Protein Homology CDS 74618 76399 . + 0 ID=cds-HJH9164700.1;Parent=gene-O5D79_003259;Dbxref=NCBI_GP:HJH9164700.1;Name=HJH9164700.1;Ontology_term=GO:0009436,GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459512.1;locus_tag=O5D79_003259;product=glyoxylate carboligase;protein_id=HJH9164700.1;transl_table=11 DALFDJ020000017.1 tpg gene 76412 77188 . + . ID=gene-O5D79_003260;Name=gip;gbkey=Gene;gene=gip;gene_biotype=protein_coding;locus_tag=O5D79_003260 DALFDJ020000017.1 Protein Homology CDS 76412 77188 . + 0 ID=cds-HJH9164701.1;Parent=gene-O5D79_003260;Dbxref=NCBI_GP:HJH9164701.1;Name=HJH9164701.1;gbkey=CDS;gene=gip;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459513.1;locus_tag=O5D79_003260;product=hydroxypyruvate isomerase Gip;protein_id=HJH9164701.1;transl_table=11 DALFDJ020000017.1 tpg gene 77289 78167 . + . ID=gene-O5D79_003261;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=O5D79_003261 DALFDJ020000017.1 Protein Homology CDS 77289 78167 . + 0 ID=cds-HJH9164702.1;Parent=gene-O5D79_003261;Dbxref=NCBI_GP:HJH9164702.1;Name=HJH9164702.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459514.1;locus_tag=O5D79_003261;product=2-hydroxy-3-oxopropionate reductase;protein_id=HJH9164702.1;transl_table=11 DALFDJ020000017.1 tpg gene 78233 79480 . + . ID=gene-O5D79_003262;Name=O5D79_003262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003262 DALFDJ020000017.1 Protein Homology CDS 78233 79480 . + 0 ID=cds-HJH9164703.1;Parent=gene-O5D79_003262;Dbxref=NCBI_GP:HJH9164703.1;Name=HJH9164703.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459515.1;locus_tag=O5D79_003262;product=MFS transporter;protein_id=HJH9164703.1;transl_table=11 DALFDJ020000017.1 tpg gene 79576 81030 . + . ID=gene-O5D79_003263;Name=O5D79_003263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003263 DALFDJ020000017.1 Protein Homology CDS 79576 81030 . + 0 ID=cds-HJH9164704.1;Parent=gene-O5D79_003263;Dbxref=NCBI_GP:HJH9164704.1;Name=HJH9164704.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=O5D79_003263;product=allantoin transporter;protein_id=HJH9164704.1;transl_table=11 DALFDJ020000017.1 tpg gene 81109 82470 . + . ID=gene-O5D79_003264;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=O5D79_003264 DALFDJ020000017.1 Protein Homology CDS 81109 82470 . + 0 ID=cds-HJH9164705.1;Parent=gene-O5D79_003264;Dbxref=NCBI_GP:HJH9164705.1;Name=HJH9164705.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459518.1;locus_tag=O5D79_003264;product=allantoinase AllB;protein_id=HJH9164705.1;transl_table=11 DALFDJ020000017.1 tpg gene 82529 83827 . + . ID=gene-O5D79_003265;Name=O5D79_003265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003265 DALFDJ020000017.1 Protein Homology CDS 82529 83827 . + 0 ID=cds-HJH9164706.1;Parent=gene-O5D79_003265;Dbxref=NCBI_GP:HJH9164706.1;Name=HJH9164706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459519.1;locus_tag=O5D79_003265;product=uracil/xanthine transporter;protein_id=HJH9164706.1;transl_table=11 DALFDJ020000017.1 tpg gene 83850 84998 . + . ID=gene-O5D79_003266;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=O5D79_003266 DALFDJ020000017.1 Protein Homology CDS 83850 84998 . + 0 ID=cds-HJH9164707.1;Parent=gene-O5D79_003266;Dbxref=NCBI_GP:HJH9164707.1;Name=HJH9164707.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459520.1;locus_tag=O5D79_003266;product=glycerate 3-kinase;protein_id=HJH9164707.1;transl_table=11 DALFDJ020000017.1 tpg gene 85078 85863 . - . ID=gene-O5D79_003267;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=O5D79_003267 DALFDJ020000017.1 Protein Homology CDS 85078 85863 . - 0 ID=cds-HJH9164708.1;Parent=gene-O5D79_003267;Dbxref=NCBI_GP:HJH9164708.1;Name=HJH9164708.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459521.1;locus_tag=O5D79_003267;product=(S)-ureidoglycine aminohydrolase;protein_id=HJH9164708.1;transl_table=11 DALFDJ020000017.1 tpg gene 85874 87109 . - . ID=gene-O5D79_003268;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=O5D79_003268 DALFDJ020000017.1 Protein Homology CDS 85874 87109 . - 0 ID=cds-HJH9164709.1;Parent=gene-O5D79_003268;Dbxref=NCBI_GP:HJH9164709.1;Name=HJH9164709.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459522.1;locus_tag=O5D79_003268;product=allantoate deiminase;protein_id=HJH9164709.1;transl_table=11 DALFDJ020000017.1 tpg gene 87131 88180 . - . ID=gene-O5D79_003269;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=O5D79_003269 DALFDJ020000017.1 Protein Homology CDS 87131 88180 . - 0 ID=cds-HJH9164710.1;Parent=gene-O5D79_003269;Dbxref=NCBI_GP:HJH9164710.1;Name=HJH9164710.1;gbkey=CDS;gene=allD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459523.1;locus_tag=O5D79_003269;product=ureidoglycolate dehydrogenase AllD;protein_id=HJH9164710.1;transl_table=11 DALFDJ020000017.1 tpg gene 88496 90160 . + . ID=gene-O5D79_003270;Name=O5D79_003270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003270 DALFDJ020000017.1 Protein Homology CDS 88496 90160 . + 0 ID=cds-HJH9164711.1;Parent=gene-O5D79_003270;Dbxref=NCBI_GP:HJH9164711.1;Name=HJH9164711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459524.1;locus_tag=O5D79_003270;product=acyl-CoA synthetase FdrA;protein_id=HJH9164711.1;transl_table=11 DALFDJ020000017.1 tpg gene 90170 91429 . + . ID=gene-O5D79_003271;Name=O5D79_003271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003271 DALFDJ020000017.1 Protein Homology CDS 90170 91429 . + 0 ID=cds-HJH9164712.1;Parent=gene-O5D79_003271;Dbxref=NCBI_GP:HJH9164712.1;Name=HJH9164712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459525.1;locus_tag=O5D79_003271;product=DUF1116 domain-containing protein;protein_id=HJH9164712.1;transl_table=11 DALFDJ020000017.1 tpg gene 91441 92250 . + . ID=gene-O5D79_003272;Name=O5D79_003272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003272 DALFDJ020000017.1 Protein Homology CDS 91441 92250 . + 0 ID=cds-HJH9164713.1;Parent=gene-O5D79_003272;Dbxref=NCBI_GP:HJH9164713.1;Name=HJH9164713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459526.1;locus_tag=O5D79_003272;product=DUF2877 domain-containing protein;protein_id=HJH9164713.1;transl_table=11 DALFDJ020000017.1 tpg gene 92254 93147 . + . ID=gene-O5D79_003273;Name=O5D79_003273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003273 DALFDJ020000017.1 Protein Homology CDS 92254 93147 . + 0 ID=cds-HJH9164714.1;Parent=gene-O5D79_003273;Dbxref=NCBI_GP:HJH9164714.1;Name=HJH9164714.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459527.1;locus_tag=O5D79_003273;product=carbamate kinase;protein_id=HJH9164714.1;transl_table=11 DALFDJ020000017.1 tpg gene 93188 94255 . - . ID=gene-O5D79_003274;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=O5D79_003274 DALFDJ020000017.1 Protein Homology CDS 93188 94255 . - 0 ID=cds-HJH9164715.1;Parent=gene-O5D79_003274;Dbxref=NCBI_GP:HJH9164715.1;Name=HJH9164715.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459528.1;locus_tag=O5D79_003274;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=HJH9164715.1;transl_table=11 DALFDJ020000017.1 tpg gene 94252 94761 . - . ID=gene-O5D79_003275;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=O5D79_003275 DALFDJ020000017.1 Protein Homology CDS 94252 94761 . - 0 ID=cds-HJH9164716.1;Parent=gene-O5D79_003275;Dbxref=NCBI_GP:HJH9164716.1;Name=HJH9164716.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459529.1;locus_tag=O5D79_003275;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=HJH9164716.1;transl_table=11 DALFDJ020000017.1 tpg gene 94879 95601 . - . ID=gene-O5D79_003276;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=O5D79_003276 DALFDJ020000017.1 Protein Homology CDS 94879 95601 . - 0 ID=cds-HJH9164717.1;Parent=gene-O5D79_003276;Dbxref=NCBI_GP:HJH9164717.1;Name=HJH9164717.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459530.1;locus_tag=O5D79_003276;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=HJH9164717.1;transl_table=11 DALFDJ020000017.1 tpg gene 95604 96098 . - . ID=gene-O5D79_003277;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=O5D79_003277 DALFDJ020000017.1 Protein Homology CDS 95604 96098 . - 0 ID=cds-HJH9164718.1;Parent=gene-O5D79_003277;Dbxref=NCBI_GP:HJH9164718.1;Name=HJH9164718.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=O5D79_003277;product=peptidylprolyl isomerase B;protein_id=HJH9164718.1;transl_table=11 DALFDJ020000017.1 tpg gene 96271 97656 . + . ID=gene-O5D79_003278;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=O5D79_003278 DALFDJ020000017.1 Protein Homology CDS 96271 97656 . + 0 ID=cds-HJH9164719.1;Parent=gene-O5D79_003278;Dbxref=NCBI_GP:HJH9164719.1;Name=HJH9164719.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=O5D79_003278;product=cysteine--tRNA ligase;protein_id=HJH9164719.1;transl_table=11 DALFDJ020000017.1 tpg gene 97747 98295 . - . ID=gene-O5D79_003279;Name=O5D79_003279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003279 DALFDJ020000017.1 Protein Homology CDS 97747 98295 . - 0 ID=cds-HJH9164720.1;Parent=gene-O5D79_003279;Dbxref=NCBI_GP:HJH9164720.1;Name=HJH9164720.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728132.1;locus_tag=O5D79_003279;product=metal-dependent hydrolase;protein_id=HJH9164720.1;transl_table=11 DALFDJ020000017.1 tpg gene 98422 98634 . - . ID=gene-O5D79_003280;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=O5D79_003280 DALFDJ020000017.1 Protein Homology CDS 98422 98634 . - 0 ID=cds-HJH9164721.1;Parent=gene-O5D79_003280;Dbxref=NCBI_GP:HJH9164721.1;Name=HJH9164721.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459536.1;locus_tag=O5D79_003280;product=ribosome-associated protein YbcJ;protein_id=HJH9164721.1;transl_table=11 DALFDJ020000017.1 tpg gene 98636 99502 . - . ID=gene-O5D79_003281;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=O5D79_003281 DALFDJ020000017.1 Protein Homology CDS 98636 99502 . - 0 ID=cds-HJH9164722.1;Parent=gene-O5D79_003281;Dbxref=NCBI_GP:HJH9164722.1;Name=HJH9164722.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459537.1;locus_tag=O5D79_003281;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=HJH9164722.1;transl_table=11 DALFDJ020000017.1 tpg gene 100049 100606 . + . ID=gene-O5D79_003282;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=O5D79_003282 DALFDJ020000017.1 Protein Homology CDS 100049 100606 . + 0 ID=cds-HJH9164723.1;Parent=gene-O5D79_003282;Dbxref=NCBI_GP:HJH9164723.1;Name=HJH9164723.1;gbkey=CDS;gene=fimA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459538.3;locus_tag=O5D79_003282;product=type 1 fimbrial protein subunit FimA;protein_id=HJH9164723.1;transl_table=11 DALFDJ020000017.1 tpg gene 100681 101214 . + . ID=gene-O5D79_003283;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=O5D79_003283 DALFDJ020000017.1 Protein Homology CDS 100681 101214 . + 0 ID=cds-HJH9164724.1;Parent=gene-O5D79_003283;Dbxref=NCBI_GP:HJH9164724.1;Name=HJH9164724.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459539.1;locus_tag=O5D79_003283;product=type 1 fimbrial protein subunit FimI;protein_id=HJH9164724.1;transl_table=11 DALFDJ020000017.1 tpg gene 101258 101950 . + . ID=gene-O5D79_003284;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=O5D79_003284 DALFDJ020000017.1 Protein Homology CDS 101258 101950 . + 0 ID=cds-HJH9164725.1;Parent=gene-O5D79_003284;Dbxref=NCBI_GP:HJH9164725.1;Name=HJH9164725.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459540.1;locus_tag=O5D79_003284;product=type 1 fimbria chaperone FimC;protein_id=HJH9164725.1;transl_table=11 DALFDJ020000017.1 tpg gene 101981 104593 . + . ID=gene-O5D79_003285;Name=O5D79_003285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003285 DALFDJ020000017.1 Protein Homology CDS 101981 104593 . + 0 ID=cds-HJH9164726.1;Parent=gene-O5D79_003285;Dbxref=NCBI_GP:HJH9164726.1;Name=HJH9164726.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459541.1;locus_tag=O5D79_003285;product=fimbrial biogenesis usher protein;protein_id=HJH9164726.1;transl_table=11 DALFDJ020000017.1 tpg gene 104608 105615 . + . ID=gene-O5D79_003286;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=O5D79_003286 DALFDJ020000017.1 Protein Homology CDS 104608 105615 . + 0 ID=cds-HJH9164727.1;Parent=gene-O5D79_003286;Dbxref=NCBI_GP:HJH9164727.1;Name=HJH9164727.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459542.1;locus_tag=O5D79_003286;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=HJH9164727.1;transl_table=11 DALFDJ020000017.1 tpg gene 105625 106143 . + . ID=gene-O5D79_003287;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=O5D79_003287 DALFDJ020000017.1 Protein Homology CDS 105625 106143 . + 0 ID=cds-HJH9164728.1;Parent=gene-O5D79_003287;Dbxref=NCBI_GP:HJH9164728.1;Name=HJH9164728.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459543.1;locus_tag=O5D79_003287;product=fimbria assembly protein;protein_id=HJH9164728.1;transl_table=11 DALFDJ020000017.1 tpg gene 106189 106821 . - . ID=gene-O5D79_003288;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=O5D79_003288 DALFDJ020000017.1 Protein Homology CDS 106189 106821 . - 0 ID=cds-HJH9164729.1;Parent=gene-O5D79_003288;Dbxref=NCBI_GP:HJH9164729.1;Name=HJH9164729.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459544.1;locus_tag=O5D79_003288;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=HJH9164729.1;transl_table=11 DALFDJ020000017.1 tpg gene 107425 108147 . - . ID=gene-O5D79_003289;Name=fimY;gbkey=Gene;gene=fimY;gene_biotype=protein_coding;locus_tag=O5D79_003289 DALFDJ020000017.1 Protein Homology CDS 107425 108147 . - 0 ID=cds-HJH9164730.1;Parent=gene-O5D79_003289;Dbxref=NCBI_GP:HJH9164730.1;Name=HJH9164730.1;gbkey=CDS;gene=fimY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459545.1;locus_tag=O5D79_003289;product=fimbria biosynthesis regulator FimY;protein_id=HJH9164730.1;transl_table=11 DALFDJ020000017.1 tpg gene 108166 108477 . - . ID=gene-O5D79_003290;Name=O5D79_003290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003290 DALFDJ020000017.1 Protein Homology CDS 108166 108477 . - 0 ID=cds-HJH9164731.1;Parent=gene-O5D79_003290;Dbxref=NCBI_GP:HJH9164731.1;Name=HJH9164731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459546.1;locus_tag=O5D79_003290;product=diguanylate cyclase;protein_id=HJH9164731.1;transl_table=11 DALFDJ020000017.1 tpg gene 108639 109235 . - . ID=gene-O5D79_003291;Name=fimW;gbkey=Gene;gene=fimW;gene_biotype=protein_coding;locus_tag=O5D79_003291 DALFDJ020000017.1 Protein Homology CDS 108639 109235 . - 0 ID=cds-HJH9164732.1;Parent=gene-O5D79_003291;Dbxref=NCBI_GP:HJH9164732.1;Name=HJH9164732.1;gbkey=CDS;gene=fimW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459547.1;locus_tag=O5D79_003291;product=fimbria biosynthesis transcriptional regulator FimW;protein_id=HJH9164732.1;transl_table=11 DALFDJ020000017.1 tpg gene 109490 109566 . + . ID=gene-O5D79_003292;Name=O5D79_003292;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_003292 DALFDJ020000017.1 tRNAscan-SE tRNA 109490 109566 . + . ID=rna-O5D79_003292;Parent=gene-O5D79_003292;anticodon=(pos:109524..109526);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003292;product=tRNA-Arg DALFDJ020000017.1 tRNAscan-SE exon 109490 109566 . + . ID=exon-O5D79_003292-1;Parent=rna-O5D79_003292;anticodon=(pos:109524..109526);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003292;product=tRNA-Arg DALFDJ020000017.1 tpg gene 109582 110745 . - . ID=gene-O5D79_003293;Name=O5D79_003293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003293 DALFDJ020000017.1 Protein Homology CDS 109582 110745 . - 0 ID=cds-HJH9164733.1;Parent=gene-O5D79_003293;Dbxref=NCBI_GP:HJH9164733.1;Name=HJH9164733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415069.1;locus_tag=O5D79_003293;product=integrase;protein_id=HJH9164733.1;transl_table=11 DALFDJ020000017.1 tpg pseudogene 110877 110972 . - . ID=gene-O5D79_003294;Name=O5D79_003294;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003294;pseudo=true DALFDJ020000017.1 Protein Homology CDS 110877 110972 . - 0 ID=cds-O5D79_003294;Parent=gene-O5D79_003294;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024139.6;locus_tag=O5D79_003294;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000017.1 tpg gene 110975 111325 . - . ID=gene-O5D79_003295;Name=O5D79_003295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003295 DALFDJ020000017.1 Protein Homology CDS 110975 111325 . - 0 ID=cds-HJH9164734.1;Parent=gene-O5D79_003295;Dbxref=NCBI_GP:HJH9164734.1;Name=HJH9164734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016048814.1;locus_tag=O5D79_003295;product=hypothetical protein;protein_id=HJH9164734.1;transl_table=11 DALFDJ020000017.1 tpg gene 111397 111681 . - . ID=gene-O5D79_003296;Name=O5D79_003296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003296 DALFDJ020000017.1 Protein Homology CDS 111397 111681 . - 0 ID=cds-HJH9164735.1;Parent=gene-O5D79_003296;Dbxref=NCBI_GP:HJH9164735.1;Name=HJH9164735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016248938.1;locus_tag=O5D79_003296;product=ASCH domain-containing protein;protein_id=HJH9164735.1;transl_table=11 DALFDJ020000017.1 tpg gene 111674 112504 . - . ID=gene-O5D79_003297;Name=O5D79_003297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003297 DALFDJ020000017.1 Protein Homology CDS 111674 112504 . - 0 ID=cds-HJH9164736.1;Parent=gene-O5D79_003297;Dbxref=NCBI_GP:HJH9164736.1;Name=HJH9164736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000156436.1;locus_tag=O5D79_003297;product=DUF551 domain-containing protein;protein_id=HJH9164736.1;transl_table=11 DALFDJ020000017.1 tpg gene 112506 112952 . - . ID=gene-O5D79_003298;Name=O5D79_003298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003298 DALFDJ020000017.1 GeneMarkS-2+ CDS 112506 112952 . - 0 ID=cds-HJH9164737.1;Parent=gene-O5D79_003298;Dbxref=NCBI_GP:HJH9164737.1;Name=HJH9164737.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_003298;product=hypothetical protein;protein_id=HJH9164737.1;transl_table=11 DALFDJ020000017.1 tpg gene 112956 113030 . - . ID=gene-O5D79_003299;Name=O5D79_003299;end_range=113030,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003299;partial=true DALFDJ020000017.1 Protein Homology CDS 112956 113030 . - 0 ID=cds-HJH9164738.1;Parent=gene-O5D79_003299;Dbxref=NCBI_GP:HJH9164738.1;Name=HJH9164738.1;end_range=113030,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206648.1;locus_tag=O5D79_003299;partial=true;product=SAM-dependent methyltransferase;protein_id=HJH9164738.1;transl_table=11 ##sequence-region DALFDJ020000018.1 1 113029 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000018.1 tpg region 1 113029 . + . ID=DALFDJ020000018.1:1..113029;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000018.1 tpg gene 380 3253 . - . ID=gene-O5D79_003300;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=O5D79_003300 DALFDJ020000018.1 Protein Homology CDS 380 3253 . - 0 ID=cds-HJH9164739.1;Parent=gene-O5D79_003300;Dbxref=NCBI_GP:HJH9164739.1;Name=HJH9164739.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461969.1;locus_tag=O5D79_003300;product=aminomethyl-transferring glycine dehydrogenase;protein_id=HJH9164739.1;transl_table=11 DALFDJ020000018.1 tpg gene 3416 3805 . - . ID=gene-O5D79_003301;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=O5D79_003301 DALFDJ020000018.1 Protein Homology CDS 3416 3805 . - 0 ID=cds-HJH9164740.1;Parent=gene-O5D79_003301;Dbxref=NCBI_GP:HJH9164740.1;Name=HJH9164740.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=O5D79_003301;product=glycine cleavage system protein GcvH;protein_id=HJH9164740.1;transl_table=11 DALFDJ020000018.1 tpg gene 3831 4925 . - . ID=gene-O5D79_003302;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=O5D79_003302 DALFDJ020000018.1 Protein Homology CDS 3831 4925 . - 0 ID=cds-HJH9164741.1;Parent=gene-O5D79_003302;Dbxref=NCBI_GP:HJH9164741.1;Name=HJH9164741.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461971.1;locus_tag=O5D79_003302;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=HJH9164741.1;transl_table=11 DALFDJ020000018.1 tpg gene 5380 6582 . - . ID=gene-O5D79_003303;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=O5D79_003303 DALFDJ020000018.1 Protein Homology CDS 5380 6582 . - 0 ID=cds-HJH9164742.1;Parent=gene-O5D79_003303;Dbxref=NCBI_GP:HJH9164742.1;Name=HJH9164742.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=O5D79_003303;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=HJH9164742.1;transl_table=11 DALFDJ020000018.1 tpg gene 6708 7886 . - . ID=gene-O5D79_003304;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=O5D79_003304 DALFDJ020000018.1 Protein Homology CDS 6708 7886 . - 0 ID=cds-HJH9164743.1;Parent=gene-O5D79_003304;Dbxref=NCBI_GP:HJH9164743.1;Name=HJH9164743.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461973.2;locus_tag=O5D79_003304;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=HJH9164743.1;transl_table=11 DALFDJ020000018.1 tpg gene 7883 9199 . - . ID=gene-O5D79_003305;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=O5D79_003305 DALFDJ020000018.1 Protein Homology CDS 7883 9199 . - 0 ID=cds-HJH9164744.1;Parent=gene-O5D79_003305;Dbxref=NCBI_GP:HJH9164744.1;Name=HJH9164744.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461974.1;locus_tag=O5D79_003305;product=Xaa-Pro aminopeptidase;protein_id=HJH9164744.1;transl_table=11 DALFDJ020000018.1 tpg gene 9225 9803 . - . ID=gene-O5D79_003306;Name=O5D79_003306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003306 DALFDJ020000018.1 Protein Homology CDS 9225 9803 . - 0 ID=cds-HJH9164745.1;Parent=gene-O5D79_003306;Dbxref=NCBI_GP:HJH9164745.1;Name=HJH9164745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=O5D79_003306;product=YecA family protein;protein_id=HJH9164745.1;transl_table=11 DALFDJ020000018.1 tpg gene 9970 10299 . + . ID=gene-O5D79_003307;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=O5D79_003307 DALFDJ020000018.1 Protein Homology CDS 9970 10299 . + 0 ID=cds-HJH9164746.1;Parent=gene-O5D79_003307;Dbxref=NCBI_GP:HJH9164746.1;Name=HJH9164746.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=O5D79_003307;product=cell division protein ZapA;protein_id=HJH9164746.1;transl_table=11 DALFDJ020000018.1 tpg gene 10341 10524 . + . ID=gene-O5D79_003308;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=O5D79_003308 DALFDJ020000018.1 cmsearch ncRNA 10341 10524 . + . ID=rna-O5D79_003308;Parent=gene-O5D79_003308;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_003308;product=6S RNA DALFDJ020000018.1 cmsearch exon 10341 10524 . + . ID=exon-O5D79_003308-1;Parent=rna-O5D79_003308;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_003308;product=6S RNA DALFDJ020000018.1 tpg gene 10545 11141 . + . ID=gene-O5D79_003309;Name=O5D79_003309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003309 DALFDJ020000018.1 Protein Homology CDS 10545 11141 . + 0 ID=cds-HJH9164747.1;Parent=gene-O5D79_003309;Dbxref=NCBI_GP:HJH9164747.1;Name=HJH9164747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=O5D79_003309;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=HJH9164747.1;transl_table=11 DALFDJ020000018.1 tpg gene 11523 12755 . - . ID=gene-O5D79_003310;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=O5D79_003310 DALFDJ020000018.1 Protein Homology CDS 11523 12755 . - 0 ID=cds-HJH9164748.1;Parent=gene-O5D79_003310;Dbxref=NCBI_GP:HJH9164748.1;Name=HJH9164748.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=O5D79_003310;product=phosphoglycerate dehydrogenase;protein_id=HJH9164748.1;transl_table=11 DALFDJ020000018.1 tpg gene 13022 13681 . - . ID=gene-O5D79_003311;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=O5D79_003311 DALFDJ020000018.1 Protein Homology CDS 13022 13681 . - 0 ID=cds-HJH9164749.1;Parent=gene-O5D79_003311;Dbxref=NCBI_GP:HJH9164749.1;Name=HJH9164749.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461979.1;locus_tag=O5D79_003311;product=ribose-5-phosphate isomerase RpiA;protein_id=HJH9164749.1;transl_table=11 DALFDJ020000018.1 tpg gene 13835 14728 . + . ID=gene-O5D79_003312;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=O5D79_003312 DALFDJ020000018.1 Protein Homology CDS 13835 14728 . + 0 ID=cds-HJH9164750.1;Parent=gene-O5D79_003312;Dbxref=NCBI_GP:HJH9164750.1;Name=HJH9164750.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461980.1;locus_tag=O5D79_003312;product=DNA-binding transcriptional regulator ArgP;protein_id=HJH9164750.1;transl_table=11 DALFDJ020000018.1 tpg gene 14994 15740 . - . ID=gene-O5D79_003313;Name=O5D79_003313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003313 DALFDJ020000018.1 Protein Homology CDS 14994 15740 . - 0 ID=cds-HJH9164751.1;Parent=gene-O5D79_003313;Dbxref=NCBI_GP:HJH9164751.1;Name=HJH9164751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461981.1;locus_tag=O5D79_003313;product=oxidative stress defense protein;protein_id=HJH9164751.1;transl_table=11 DALFDJ020000018.1 tpg gene 15834 16469 . - . ID=gene-O5D79_003314;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=O5D79_003314 DALFDJ020000018.1 Protein Homology CDS 15834 16469 . - 0 ID=cds-HJH9164752.1;Parent=gene-O5D79_003314;Dbxref=NCBI_GP:HJH9164752.1;Name=HJH9164752.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461982.1;locus_tag=O5D79_003314;product=arginine exporter ArgO;protein_id=HJH9164752.1;transl_table=11 DALFDJ020000018.1 tpg gene 16670 17530 . - . ID=gene-O5D79_003315;Name=O5D79_003315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003315 DALFDJ020000018.1 Protein Homology CDS 16670 17530 . - 0 ID=cds-HJH9164753.1;Parent=gene-O5D79_003315;Dbxref=NCBI_GP:HJH9164753.1;Name=HJH9164753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461983.1;locus_tag=O5D79_003315;product=small-conductance mechanosensitive channel MscS;protein_id=HJH9164753.1;transl_table=11 DALFDJ020000018.1 tpg gene 17752 18831 . - . ID=gene-O5D79_003316;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=O5D79_003316 DALFDJ020000018.1 Protein Homology CDS 17752 18831 . - 0 ID=cds-HJH9164754.1;Parent=gene-O5D79_003316;Dbxref=NCBI_GP:HJH9164754.1;Name=HJH9164754.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=O5D79_003316;product=class II fructose-bisphosphate aldolase;protein_id=HJH9164754.1;transl_table=11 DALFDJ020000018.1 tpg gene 18933 20096 . - . ID=gene-O5D79_003317;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=O5D79_003317 DALFDJ020000018.1 Protein Homology CDS 18933 20096 . - 0 ID=cds-HJH9164755.1;Parent=gene-O5D79_003317;Dbxref=NCBI_GP:HJH9164755.1;Name=HJH9164755.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=O5D79_003317;product=phosphoglycerate kinase;protein_id=HJH9164755.1;transl_table=11 DALFDJ020000018.1 tpg gene 20118 21164 . - . ID=gene-O5D79_003318;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=O5D79_003318 DALFDJ020000018.1 Protein Homology CDS 20118 21164 . - 0 ID=cds-HJH9164756.1;Parent=gene-O5D79_003318;Dbxref=NCBI_GP:HJH9164756.1;Name=HJH9164756.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461986.1;locus_tag=O5D79_003318;product=erythrose-4-phosphate dehydrogenase;protein_id=HJH9164756.1;transl_table=11 DALFDJ020000018.1 tpg gene 21538 21963 . + . ID=gene-O5D79_003319;Name=O5D79_003319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003319 DALFDJ020000018.1 Protein Homology CDS 21538 21963 . + 0 ID=cds-HJH9164757.1;Parent=gene-O5D79_003319;Dbxref=NCBI_GP:HJH9164757.1;Name=HJH9164757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461987.1;locus_tag=O5D79_003319;product=PPC domain-containing DNA-binding protein;protein_id=HJH9164757.1;transl_table=11 DALFDJ020000018.1 tpg gene 21989 22567 . + . ID=gene-O5D79_003320;Name=O5D79_003320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003320 DALFDJ020000018.1 Protein Homology CDS 21989 22567 . + 0 ID=cds-HJH9164758.1;Parent=gene-O5D79_003320;Dbxref=NCBI_GP:HJH9164758.1;Name=HJH9164758.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461988.1;locus_tag=O5D79_003320;product=ECF transporter S component;protein_id=HJH9164758.1;transl_table=11 DALFDJ020000018.1 tpg gene 22568 23275 . + . ID=gene-O5D79_003321;Name=O5D79_003321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003321 DALFDJ020000018.1 Protein Homology CDS 22568 23275 . + 0 ID=cds-HJH9164759.1;Parent=gene-O5D79_003321;Dbxref=NCBI_GP:HJH9164759.1;Name=HJH9164759.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461989.1;locus_tag=O5D79_003321;product=energy-coupling factor transporter transmembrane component T;protein_id=HJH9164759.1;transl_table=11 DALFDJ020000018.1 tpg gene 23263 23940 . + . ID=gene-O5D79_003322;Name=O5D79_003322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003322 DALFDJ020000018.1 Protein Homology CDS 23263 23940 . + 0 ID=cds-HJH9164760.1;Parent=gene-O5D79_003322;Dbxref=NCBI_GP:HJH9164760.1;Name=HJH9164760.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461990.1;locus_tag=O5D79_003322;product=ATP-binding cassette domain-containing protein;protein_id=HJH9164760.1;transl_table=11 DALFDJ020000018.1 tpg gene 23934 24590 . + . ID=gene-O5D79_003323;Name=O5D79_003323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003323 DALFDJ020000018.1 Protein Homology CDS 23934 24590 . + 0 ID=cds-HJH9164761.1;Parent=gene-O5D79_003323;Dbxref=NCBI_GP:HJH9164761.1;Name=HJH9164761.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461991.1;locus_tag=O5D79_003323;product=ABC transporter ATP-binding protein;protein_id=HJH9164761.1;transl_table=11 DALFDJ020000018.1 tpg gene 24634 26625 . - . ID=gene-O5D79_003324;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=O5D79_003324 DALFDJ020000018.1 Protein Homology CDS 24634 26625 . - 0 ID=cds-HJH9164762.1;Parent=gene-O5D79_003324;Dbxref=NCBI_GP:HJH9164762.1;Name=HJH9164762.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461992.1;locus_tag=O5D79_003324;product=transketolase;protein_id=HJH9164762.1;transl_table=11 DALFDJ020000018.1 tpg gene 26901 27659 . + . ID=gene-O5D79_003325;Name=O5D79_003325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003325 DALFDJ020000018.1 Protein Homology CDS 26901 27659 . + 0 ID=cds-HJH9164763.1;Parent=gene-O5D79_003325;Dbxref=NCBI_GP:HJH9164763.1;Name=HJH9164763.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=O5D79_003325;product=M48 family metallopeptidase;protein_id=HJH9164763.1;transl_table=11 DALFDJ020000018.1 tpg gene 27760 28680 . - . ID=gene-O5D79_003326;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=O5D79_003326 DALFDJ020000018.1 Protein Homology CDS 27760 28680 . - 0 ID=cds-HJH9164764.1;Parent=gene-O5D79_003326;Dbxref=NCBI_GP:HJH9164764.1;Name=HJH9164764.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461994.1;locus_tag=O5D79_003326;product=agmatinase;protein_id=HJH9164764.1;transl_table=11 DALFDJ020000018.1 tpg gene 28909 30885 . - . ID=gene-O5D79_003327;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=O5D79_003327 DALFDJ020000018.1 Protein Homology CDS 28909 30885 . - 0 ID=cds-HJH9164765.1;Parent=gene-O5D79_003327;Dbxref=NCBI_GP:HJH9164765.1;Name=HJH9164765.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462002.1;locus_tag=O5D79_003327;product=biosynthetic arginine decarboxylase;protein_id=HJH9164765.1;transl_table=11 DALFDJ020000018.1 tpg gene 30894 31025 . - . ID=gene-O5D79_003328;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=O5D79_003328 DALFDJ020000018.1 Protein Homology CDS 30894 31025 . - 0 ID=cds-HJH9164766.1;Parent=gene-O5D79_003328;Dbxref=NCBI_GP:HJH9164766.1;Name=HJH9164766.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462003.1;locus_tag=O5D79_003328;product=acid stress response protein YqgB;protein_id=HJH9164766.1;transl_table=11 DALFDJ020000018.1 tpg gene 31111 31260 . - . ID=gene-O5D79_003329;Name=O5D79_003329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003329 DALFDJ020000018.1 Protein Homology CDS 31111 31260 . - 0 ID=cds-HJH9164767.1;Parent=gene-O5D79_003329;Dbxref=NCBI_GP:HJH9164767.1;Name=HJH9164767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=O5D79_003329;product=hypothetical protein;protein_id=HJH9164767.1;transl_table=11 DALFDJ020000018.1 tpg gene 31320 31619 . - . ID=gene-O5D79_003330;Name=O5D79_003330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003330 DALFDJ020000018.1 GeneMarkS-2+ CDS 31320 31619 . - 0 ID=cds-HJH9164768.1;Parent=gene-O5D79_003330;Dbxref=NCBI_GP:HJH9164768.1;Name=HJH9164768.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_003330;product=hypothetical protein;protein_id=HJH9164768.1;transl_table=11 DALFDJ020000018.1 tpg gene 31675 32829 . + . ID=gene-O5D79_003331;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=O5D79_003331 DALFDJ020000018.1 Protein Homology CDS 31675 32829 . + 0 ID=cds-HJH9164769.1;Parent=gene-O5D79_003331;Dbxref=NCBI_GP:HJH9164769.1;Name=HJH9164769.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=O5D79_003331;product=methionine adenosyltransferase;protein_id=HJH9164769.1;transl_table=11 DALFDJ020000018.1 tpg gene 33322 34716 . + . ID=gene-O5D79_003332;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=O5D79_003332 DALFDJ020000018.1 Protein Homology CDS 33322 34716 . + 0 ID=cds-HJH9164770.1;Parent=gene-O5D79_003332;Dbxref=NCBI_GP:HJH9164770.1;Name=HJH9164770.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462007.1;locus_tag=O5D79_003332;product=galactose/proton symporter;protein_id=HJH9164770.1;transl_table=11 DALFDJ020000018.1 tpg gene 34795 35292 . + . ID=gene-O5D79_003333;Name=O5D79_003333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003333 DALFDJ020000018.1 Protein Homology CDS 34795 35292 . + 0 ID=cds-HJH9164771.1;Parent=gene-O5D79_003333;Dbxref=NCBI_GP:HJH9164771.1;Name=HJH9164771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462008.1;locus_tag=O5D79_003333;product=SprT family zinc-dependent metalloprotease;protein_id=HJH9164771.1;transl_table=11 DALFDJ020000018.1 tpg gene 35388 36095 . + . ID=gene-O5D79_003334;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=O5D79_003334 DALFDJ020000018.1 Protein Homology CDS 35388 36095 . + 0 ID=cds-HJH9164772.1;Parent=gene-O5D79_003334;Dbxref=NCBI_GP:HJH9164772.1;Name=HJH9164772.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462009.1;locus_tag=O5D79_003334;product=deoxyribonuclease I;protein_id=HJH9164772.1;transl_table=11 DALFDJ020000018.1 tpg gene 36172 36903 . + . ID=gene-O5D79_003335;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=O5D79_003335 DALFDJ020000018.1 Protein Homology CDS 36172 36903 . + 0 ID=cds-HJH9164773.1;Parent=gene-O5D79_003335;Dbxref=NCBI_GP:HJH9164773.1;Name=HJH9164773.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=O5D79_003335;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=HJH9164773.1;transl_table=11 DALFDJ020000018.1 tpg gene 36923 37870 . + . ID=gene-O5D79_003336;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=O5D79_003336 DALFDJ020000018.1 Protein Homology CDS 36923 37870 . + 0 ID=cds-HJH9164774.1;Parent=gene-O5D79_003336;Dbxref=NCBI_GP:HJH9164774.1;Name=HJH9164774.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=O5D79_003336;product=glutathione synthase;protein_id=HJH9164774.1;transl_table=11 DALFDJ020000018.1 tpg gene 38086 38649 . + . ID=gene-O5D79_003337;Name=O5D79_003337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003337 DALFDJ020000018.1 Protein Homology CDS 38086 38649 . + 0 ID=cds-HJH9164775.1;Parent=gene-O5D79_003337;Dbxref=NCBI_GP:HJH9164775.1;Name=HJH9164775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=O5D79_003337;product=YqgE/AlgH family protein;protein_id=HJH9164775.1;transl_table=11 DALFDJ020000018.1 tpg gene 38649 39065 . + . ID=gene-O5D79_003338;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=O5D79_003338 DALFDJ020000018.1 Protein Homology CDS 38649 39065 . + 0 ID=cds-HJH9164776.1;Parent=gene-O5D79_003338;Dbxref=NCBI_GP:HJH9164776.1;Name=HJH9164776.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462013.1;locus_tag=O5D79_003338;product=Holliday junction resolvase RuvX;protein_id=HJH9164776.1;transl_table=11 DALFDJ020000018.1 tpg gene 39112 39798 . - . ID=gene-O5D79_003339;Name=O5D79_003339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003339 DALFDJ020000018.1 Protein Homology CDS 39112 39798 . - 0 ID=cds-HJH9164777.1;Parent=gene-O5D79_003339;Dbxref=NCBI_GP:HJH9164777.1;Name=HJH9164777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462014.1;locus_tag=O5D79_003339;product=IclR family transcriptional regulator domain-containing protein;protein_id=HJH9164777.1;transl_table=11 DALFDJ020000018.1 tpg gene 39930 40910 . - . ID=gene-O5D79_003340;Name=O5D79_003340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003340 DALFDJ020000018.1 Protein Homology CDS 39930 40910 . - 0 ID=cds-HJH9164778.1;Parent=gene-O5D79_003340;Dbxref=NCBI_GP:HJH9164778.1;Name=HJH9164778.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462015.1;locus_tag=O5D79_003340;product=type IV pilus twitching motility protein PilT;protein_id=HJH9164778.1;transl_table=11 DALFDJ020000018.1 tpg gene 40928 41632 . + . ID=gene-O5D79_003341;Name=O5D79_003341;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003341 DALFDJ020000018.1 Protein Homology CDS 40928 41632 . + 0 ID=cds-HJH9164779.1;Parent=gene-O5D79_003341;Dbxref=NCBI_GP:HJH9164779.1;Name=HJH9164779.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462016.1;locus_tag=O5D79_003341;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=HJH9164779.1;transl_table=11 DALFDJ020000018.1 tpg gene 41651 42217 . + . ID=gene-O5D79_003342;Name=O5D79_003342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003342 DALFDJ020000018.1 Protein Homology CDS 41651 42217 . + 0 ID=cds-HJH9164780.1;Parent=gene-O5D79_003342;Dbxref=NCBI_GP:HJH9164780.1;Name=HJH9164780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=O5D79_003342;product=YggT family protein;protein_id=HJH9164780.1;transl_table=11 DALFDJ020000018.1 tpg gene 42214 42504 . + . ID=gene-O5D79_003343;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=O5D79_003343 DALFDJ020000018.1 Protein Homology CDS 42214 42504 . + 0 ID=cds-HJH9164781.1;Parent=gene-O5D79_003343;Dbxref=NCBI_GP:HJH9164781.1;Name=HJH9164781.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462018.1;locus_tag=O5D79_003343;product=DUF167 family protein YggU;protein_id=HJH9164781.1;transl_table=11 DALFDJ020000018.1 tpg gene 42512 43105 . + . ID=gene-O5D79_003344;Name=O5D79_003344;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003344 DALFDJ020000018.1 Protein Homology CDS 42512 43105 . + 0 ID=cds-HJH9164782.1;Parent=gene-O5D79_003344;Dbxref=NCBI_GP:HJH9164782.1;Name=HJH9164782.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462019.1;locus_tag=O5D79_003344;product=XTP/dITP diphosphatase;protein_id=HJH9164782.1;transl_table=11 DALFDJ020000018.1 tpg gene 43098 44234 . + . ID=gene-O5D79_003345;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=O5D79_003345 DALFDJ020000018.1 Protein Homology CDS 43098 44234 . + 0 ID=cds-HJH9164783.1;Parent=gene-O5D79_003345;Dbxref=NCBI_GP:HJH9164783.1;Name=HJH9164783.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462020.1;locus_tag=O5D79_003345;product=radical SAM family heme chaperone HemW;protein_id=HJH9164783.1;transl_table=11 DALFDJ020000018.1 tpg gene 44326 45333 . - . ID=gene-O5D79_003346;Name=O5D79_003346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003346 DALFDJ020000018.1 Protein Homology CDS 44326 45333 . - 0 ID=cds-HJH9164784.1;Parent=gene-O5D79_003346;Dbxref=NCBI_GP:HJH9164784.1;Name=HJH9164784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462021.1;locus_tag=O5D79_003346;product=DUF1202 domain-containing protein;protein_id=HJH9164784.1;transl_table=11 DALFDJ020000018.1 tpg gene 45466 46512 . - . ID=gene-O5D79_003347;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=O5D79_003347 DALFDJ020000018.1 Protein Homology CDS 45466 46512 . - 0 ID=cds-HJH9164785.1;Parent=gene-O5D79_003347;Dbxref=NCBI_GP:HJH9164785.1;Name=HJH9164785.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462022.1;locus_tag=O5D79_003347;product=L-asparaginase 2;protein_id=HJH9164785.1;transl_table=11 DALFDJ020000018.1 tpg gene 46701 47420 . - . ID=gene-O5D79_003348;Name=O5D79_003348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003348 DALFDJ020000018.1 Protein Homology CDS 46701 47420 . - 0 ID=cds-HJH9164786.1;Parent=gene-O5D79_003348;Dbxref=NCBI_GP:HJH9164786.1;Name=HJH9164786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462023.1;locus_tag=O5D79_003348;product=DUF2884 domain-containing protein;protein_id=HJH9164786.1;transl_table=11 DALFDJ020000018.1 tpg gene 47470 47796 . - . ID=gene-O5D79_003349;Name=O5D79_003349;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003349 DALFDJ020000018.1 Protein Homology CDS 47470 47796 . - 0 ID=cds-HJH9164787.1;Parent=gene-O5D79_003349;Dbxref=NCBI_GP:HJH9164787.1;Name=HJH9164787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462024.1;locus_tag=O5D79_003349;product=YggL family protein;protein_id=HJH9164787.1;transl_table=11 DALFDJ020000018.1 tpg gene 47796 48515 . - . ID=gene-O5D79_003350;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=O5D79_003350 DALFDJ020000018.1 Protein Homology CDS 47796 48515 . - 0 ID=cds-HJH9164788.1;Parent=gene-O5D79_003350;Dbxref=NCBI_GP:HJH9164788.1;Name=HJH9164788.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=O5D79_003350;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=HJH9164788.1;transl_table=11 DALFDJ020000018.1 tpg gene 48670 49722 . + . ID=gene-O5D79_003351;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=O5D79_003351 DALFDJ020000018.1 Protein Homology CDS 48670 49722 . + 0 ID=cds-HJH9164789.1;Parent=gene-O5D79_003351;Dbxref=NCBI_GP:HJH9164789.1;Name=HJH9164789.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462026.1;locus_tag=O5D79_003351;product=A/G-specific adenine glycosylase;protein_id=HJH9164789.1;transl_table=11 DALFDJ020000018.1 tpg gene 49750 50025 . + . ID=gene-O5D79_003352;Name=O5D79_003352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003352 DALFDJ020000018.1 Protein Homology CDS 49750 50025 . + 0 ID=cds-HJH9164790.1;Parent=gene-O5D79_003352;Dbxref=NCBI_GP:HJH9164790.1;Name=HJH9164790.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462027.1;locus_tag=O5D79_003352;product=oxidative damage protection protein;protein_id=HJH9164790.1;transl_table=11 DALFDJ020000018.1 tpg gene 50138 51223 . + . ID=gene-O5D79_003353;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=O5D79_003353 DALFDJ020000018.1 Protein Homology CDS 50138 51223 . + 0 ID=cds-HJH9164791.1;Parent=gene-O5D79_003353;Dbxref=NCBI_GP:HJH9164791.1;Name=HJH9164791.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462028.1;locus_tag=O5D79_003353;product=membrane-bound lytic murein transglycosylase MltC;protein_id=HJH9164791.1;transl_table=11 DALFDJ020000018.1 tpg gene 51440 52696 . + . ID=gene-O5D79_003354;Name=O5D79_003354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003354 DALFDJ020000018.1 Protein Homology CDS 51440 52696 . + 0 ID=cds-HJH9164792.1;Parent=gene-O5D79_003354;Dbxref=NCBI_GP:HJH9164792.1;Name=HJH9164792.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=O5D79_003354;product=nucleoside permease;protein_id=HJH9164792.1;transl_table=11 DALFDJ020000018.1 tpg gene 52758 54893 . - . ID=gene-O5D79_003355;Name=O5D79_003355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003355 DALFDJ020000018.1 Protein Homology CDS 52758 54893 . - 0 ID=cds-HJH9164793.1;Parent=gene-O5D79_003355;Dbxref=NCBI_GP:HJH9164793.1;Name=HJH9164793.1;Ontology_term=GO:0006596,GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;go_process=polyamine biosynthetic process|0006596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462030.1;locus_tag=O5D79_003355;product=ornithine decarboxylase;protein_id=HJH9164793.1;transl_table=11 DALFDJ020000018.1 tpg gene 55319 56026 . + . ID=gene-O5D79_003356;Name=O5D79_003356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003356 DALFDJ020000018.1 Protein Homology CDS 55319 56026 . + 0 ID=cds-HJH9164794.1;Parent=gene-O5D79_003356;Dbxref=NCBI_GP:HJH9164794.1;Name=HJH9164794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462031.1;locus_tag=O5D79_003356;product=DUF554 domain-containing protein;protein_id=HJH9164794.1;transl_table=11 DALFDJ020000018.1 tpg gene 56132 56207 . + . ID=gene-O5D79_003357;Name=O5D79_003357;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_003357 DALFDJ020000018.1 tRNAscan-SE tRNA 56132 56207 . + . ID=rna-O5D79_003357;Parent=gene-O5D79_003357;anticodon=(pos:56165..56167);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003357;product=tRNA-Phe DALFDJ020000018.1 tRNAscan-SE exon 56132 56207 . + . ID=exon-O5D79_003357-1;Parent=rna-O5D79_003357;anticodon=(pos:56165..56167);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003357;product=tRNA-Phe DALFDJ020000018.1 tpg pseudogene 56431 57406 . - . ID=gene-O5D79_003358;Name=O5D79_003358;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003358;pseudo=true DALFDJ020000018.1 Protein Homology CDS 56431 57406 . - 0 ID=cds-O5D79_003358;Parent=gene-O5D79_003358;Note=frameshifted;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750791.1;locus_tag=O5D79_003358;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 DALFDJ020000018.1 tpg gene 57540 59051 . - . ID=gene-O5D79_003359;Name=O5D79_003359;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003359 DALFDJ020000018.1 Protein Homology CDS 57540 59051 . - 0 ID=cds-HJH9164795.1;Parent=gene-O5D79_003359;Dbxref=NCBI_GP:HJH9164795.1;Name=HJH9164795.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03760.1;locus_tag=O5D79_003359;product=TraI domain-containing protein;protein_id=HJH9164795.1;transl_table=11 DALFDJ020000018.1 tpg gene 58999 60504 . - . ID=gene-O5D79_003360;Name=O5D79_003360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003360 DALFDJ020000018.1 Protein Homology CDS 58999 60504 . - 0 ID=cds-HJH9164796.1;Parent=gene-O5D79_003360;Dbxref=NCBI_GP:HJH9164796.1;Name=HJH9164796.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000060048.1;locus_tag=O5D79_003360;product=UvrD-helicase domain-containing protein;protein_id=HJH9164796.1;transl_table=11 DALFDJ020000018.1 tpg gene 61070 61408 . + . ID=gene-O5D79_003361;Name=O5D79_003361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003361 DALFDJ020000018.1 Protein Homology CDS 61070 61408 . + 0 ID=cds-HJH9164797.1;Parent=gene-O5D79_003361;Dbxref=NCBI_GP:HJH9164797.1;Name=HJH9164797.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024864.6;locus_tag=O5D79_003361;product=cupredoxin domain-containing protein;protein_id=HJH9164797.1;transl_table=11 DALFDJ020000018.1 tpg gene 61405 62211 . + . ID=gene-O5D79_003362;Name=O5D79_003362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003362 DALFDJ020000018.1 Protein Homology CDS 61405 62211 . + 0 ID=cds-HJH9164798.1;Parent=gene-O5D79_003362;Dbxref=NCBI_GP:HJH9164798.1;Name=HJH9164798.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: protein motif:HMM:NF015213.6;locus_tag=O5D79_003362;product=FTR1 family iron permease;protein_id=HJH9164798.1;transl_table=11 DALFDJ020000018.1 tpg gene 62208 62723 . + . ID=gene-O5D79_003363;Name=O5D79_003363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003363 DALFDJ020000018.1 Protein Homology CDS 62208 62723 . + 0 ID=cds-HJH9164799.1;Parent=gene-O5D79_003363;Dbxref=NCBI_GP:HJH9164799.1;Name=HJH9164799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750795.1;locus_tag=O5D79_003363;product=iron transporter;protein_id=HJH9164799.1;transl_table=11 DALFDJ020000018.1 tpg gene 62767 63681 . + . ID=gene-O5D79_003364;Name=O5D79_003364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003364 DALFDJ020000018.1 Protein Homology CDS 62767 63681 . + 0 ID=cds-HJH9164800.1;Parent=gene-O5D79_003364;Dbxref=NCBI_GP:HJH9164800.1;Name=HJH9164800.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF015100.6;locus_tag=O5D79_003364;product=RnfABCDGE type electron transport complex subunit D;protein_id=HJH9164800.1;transl_table=11 DALFDJ020000018.1 tpg gene 63671 65752 . + . ID=gene-O5D79_003365;Name=O5D79_003365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003365 DALFDJ020000018.1 Protein Homology CDS 63671 65752 . + 0 ID=cds-HJH9164801.1;Parent=gene-O5D79_003365;Dbxref=NCBI_GP:HJH9164801.1;Name=HJH9164801.1;Ontology_term=GO:0006825,GO:0005375,GO:0005507,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=copper ion transmembrane transporter activity|0005375||IEA,copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750798.1;locus_tag=O5D79_003365;product=TonB-dependent copper receptor;protein_id=HJH9164801.1;transl_table=11 DALFDJ020000018.1 tpg gene 66435 66905 . + . ID=gene-O5D79_003366;Name=O5D79_003366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003366 DALFDJ020000018.1 Protein Homology CDS 66435 66905 . + 0 ID=cds-HJH9164802.1;Parent=gene-O5D79_003366;Dbxref=NCBI_GP:HJH9164802.1;Name=HJH9164802.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: protein motif:HMM:NF018838.6;locus_tag=O5D79_003366;product=CaiF/GrlA family transcriptional regulator;protein_id=HJH9164802.1;transl_table=11 DALFDJ020000018.1 tpg gene 66994 67392 . - . ID=gene-O5D79_003367;Name=O5D79_003367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003367 DALFDJ020000018.1 Protein Homology CDS 66994 67392 . - 0 ID=cds-HJH9164803.1;Parent=gene-O5D79_003367;Dbxref=NCBI_GP:HJH9164803.1;Name=HJH9164803.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750800.1;locus_tag=O5D79_003367;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=HJH9164803.1;transl_table=11 DALFDJ020000018.1 tpg gene 67428 67646 . - . ID=gene-O5D79_003368;Name=O5D79_003368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003368 DALFDJ020000018.1 Protein Homology CDS 67428 67646 . - 0 ID=cds-HJH9164804.1;Parent=gene-O5D79_003368;Dbxref=NCBI_GP:HJH9164804.1;Name=HJH9164804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750801.1;locus_tag=O5D79_003368;product=YdcH family protein;protein_id=HJH9164804.1;transl_table=11 DALFDJ020000018.1 tpg gene 68390 69532 . - . ID=gene-O5D79_003369;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=O5D79_003369 DALFDJ020000018.1 Protein Homology CDS 68390 69532 . - 0 ID=cds-HJH9164805.1;Parent=gene-O5D79_003369;Dbxref=NCBI_GP:HJH9164805.1;Name=HJH9164805.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750802.1;locus_tag=O5D79_003369;product=porin OmpC;protein_id=HJH9164805.1;transl_table=11 DALFDJ020000018.1 tpg gene 69892 70083 . - . ID=gene-O5D79_003370;Name=O5D79_003370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003370 DALFDJ020000018.1 Protein Homology CDS 69892 70083 . - 0 ID=cds-HJH9164806.1;Parent=gene-O5D79_003370;Dbxref=NCBI_GP:HJH9164806.1;Name=HJH9164806.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033650.1;locus_tag=O5D79_003370;product=ANR family transcriptional regulator;protein_id=HJH9164806.1;transl_table=11 DALFDJ020000018.1 tpg gene 70869 71612 . + . ID=gene-O5D79_003371;Name=O5D79_003371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003371 DALFDJ020000018.1 Protein Homology CDS 70869 71612 . + 0 ID=cds-HJH9164807.1;Parent=gene-O5D79_003371;Dbxref=NCBI_GP:HJH9164807.1;Name=HJH9164807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750804.1;locus_tag=O5D79_003371;product=CZB domain-containing protein;protein_id=HJH9164807.1;transl_table=11 DALFDJ020000018.1 tpg gene 72442 72753 . + . ID=gene-O5D79_003372;Name=O5D79_003372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003372 DALFDJ020000018.1 Protein Homology CDS 72442 72753 . + 0 ID=cds-HJH9164808.1;Parent=gene-O5D79_003372;Dbxref=NCBI_GP:HJH9164808.1;Name=HJH9164808.1;Ontology_term=GO:0044780,GO:0045893;gbkey=CDS;go_process=bacterial-type flagellum assembly|0044780||IEA,positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: protein motif:HMM:NF017094.6;locus_tag=O5D79_003372;product=flagellar transcriptional regulator FlhD;protein_id=HJH9164808.1;transl_table=11 DALFDJ020000018.1 tpg gene 72743 73258 . + . ID=gene-O5D79_003373;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=O5D79_003373 DALFDJ020000018.1 Protein Homology CDS 72743 73258 . + 0 ID=cds-HJH9164809.1;Parent=gene-O5D79_003373;Dbxref=NCBI_GP:HJH9164809.1;Name=HJH9164809.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750806.1;locus_tag=O5D79_003373;product=flagellar transcriptional regulator FlhC;protein_id=HJH9164809.1;transl_table=11 DALFDJ020000018.1 tpg gene 73624 74502 . - . ID=gene-O5D79_003374;Name=O5D79_003374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003374 DALFDJ020000018.1 Protein Homology CDS 73624 74502 . - 0 ID=cds-HJH9164810.1;Parent=gene-O5D79_003374;Dbxref=NCBI_GP:HJH9164810.1;Name=HJH9164810.1;Ontology_term=GO:0030001,GO:0005524,GO:0042626,GO:0046872,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,ABC-type transporter activity|0140359||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228404.1;locus_tag=O5D79_003374;product=metal ABC transporter substrate-binding protein;protein_id=HJH9164810.1;transl_table=11 DALFDJ020000018.1 tpg gene 74517 75377 . - . ID=gene-O5D79_003375;Name=O5D79_003375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003375 DALFDJ020000018.1 Protein Homology CDS 74517 75377 . - 0 ID=cds-HJH9164811.1;Parent=gene-O5D79_003375;Dbxref=NCBI_GP:HJH9164811.1;Name=HJH9164811.1;Ontology_term=GO:0055085,GO:0042626,GO:0005886,GO:0043190;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571669.1;locus_tag=O5D79_003375;product=metal ABC transporter permease;protein_id=HJH9164811.1;transl_table=11 DALFDJ020000018.1 tpg gene 75374 76039 . - . ID=gene-O5D79_003376;Name=O5D79_003376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003376 DALFDJ020000018.1 Protein Homology CDS 75374 76039 . - 0 ID=cds-HJH9164812.1;Parent=gene-O5D79_003376;Dbxref=NCBI_GP:HJH9164812.1;Name=HJH9164812.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750809.1;locus_tag=O5D79_003376;product=metal ABC transporter ATP-binding protein;protein_id=HJH9164812.1;transl_table=11 DALFDJ020000018.1 tpg gene 76966 77223 . - . ID=gene-O5D79_003377;Name=O5D79_003377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003377 DALFDJ020000018.1 GeneMarkS-2+ CDS 76966 77223 . - 0 ID=cds-HJH9164813.1;Parent=gene-O5D79_003377;Dbxref=NCBI_GP:HJH9164813.1;Name=HJH9164813.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_003377;product=hypothetical protein;protein_id=HJH9164813.1;transl_table=11 DALFDJ020000018.1 tpg gene 77276 77794 . - . ID=gene-O5D79_003378;Name=O5D79_003378;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003378 DALFDJ020000018.1 GeneMarkS-2+ CDS 77276 77794 . - 0 ID=cds-HJH9164814.1;Parent=gene-O5D79_003378;Dbxref=NCBI_GP:HJH9164814.1;Name=HJH9164814.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_003378;product=hypothetical protein;protein_id=HJH9164814.1;transl_table=11 DALFDJ020000018.1 tpg gene 78479 80530 . - . ID=gene-O5D79_003379;Name=O5D79_003379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003379 DALFDJ020000018.1 Protein Homology CDS 78479 80530 . - 0 ID=cds-HJH9164815.1;Parent=gene-O5D79_003379;Dbxref=NCBI_GP:HJH9164815.1;Name=HJH9164815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750812.1;locus_tag=O5D79_003379;product=IreA family TonB-dependent siderophore receptor;protein_id=HJH9164815.1;transl_table=11 DALFDJ020000018.1 tpg gene 81514 83691 . + . ID=gene-O5D79_003380;Name=O5D79_003380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003380 DALFDJ020000018.1 Protein Homology CDS 81514 83691 . + 0 ID=cds-HJH9164816.1;Parent=gene-O5D79_003380;Dbxref=NCBI_GP:HJH9164816.1;Name=HJH9164816.1;Ontology_term=GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: protein motif:HMM:NF012801.6;locus_tag=O5D79_003380;product=TonB-dependent receptor;protein_id=HJH9164816.1;transl_table=11 DALFDJ020000018.1 tpg gene 84119 85438 . + . ID=gene-O5D79_003381;Name=O5D79_003381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003381 DALFDJ020000018.1 Protein Homology CDS 84119 85438 . + 0 ID=cds-HJH9164817.1;Parent=gene-O5D79_003381;Dbxref=NCBI_GP:HJH9164817.1;Name=HJH9164817.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021778.6;locus_tag=O5D79_003381;product=YncE family protein;protein_id=HJH9164817.1;transl_table=11 DALFDJ020000018.1 tpg gene 85755 86654 . - . ID=gene-O5D79_003382;Name=O5D79_003382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003382 DALFDJ020000018.1 Protein Homology CDS 85755 86654 . - 0 ID=cds-HJH9164818.1;Parent=gene-O5D79_003382;Dbxref=NCBI_GP:HJH9164818.1;Name=HJH9164818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750820.1;locus_tag=O5D79_003382;product=hypothetical protein;protein_id=HJH9164818.1;transl_table=11 DALFDJ020000018.1 tpg gene 86744 87655 . - . ID=gene-O5D79_003383;Name=O5D79_003383;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003383 DALFDJ020000018.1 Protein Homology CDS 86744 87655 . - 0 ID=cds-HJH9164819.1;Parent=gene-O5D79_003383;Dbxref=NCBI_GP:HJH9164819.1;Name=HJH9164819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000881184.1;locus_tag=O5D79_003383;product=hypothetical protein;protein_id=HJH9164819.1;transl_table=11 DALFDJ020000018.1 tpg gene 87744 89705 . - . ID=gene-O5D79_003384;Name=O5D79_003384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003384 DALFDJ020000018.1 Protein Homology CDS 87744 89705 . - 0 ID=cds-HJH9164820.1;Parent=gene-O5D79_003384;Dbxref=NCBI_GP:HJH9164820.1;Name=HJH9164820.1;Ontology_term=GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750822.1;locus_tag=O5D79_003384;product=ArdC-like ssDNA-binding domain-containing protein;protein_id=HJH9164820.1;transl_table=11 DALFDJ020000018.1 tpg gene 89808 90293 . - . ID=gene-O5D79_003385;Name=O5D79_003385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003385 DALFDJ020000018.1 Protein Homology CDS 89808 90293 . - 0 ID=cds-HJH9164821.1;Parent=gene-O5D79_003385;Dbxref=NCBI_GP:HJH9164821.1;Name=HJH9164821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000115422.1;locus_tag=O5D79_003385;product=hypothetical protein;protein_id=HJH9164821.1;transl_table=11 DALFDJ020000018.1 tpg gene 90372 90659 . - . ID=gene-O5D79_003386;Name=O5D79_003386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003386 DALFDJ020000018.1 Protein Homology CDS 90372 90659 . - 0 ID=cds-HJH9164822.1;Parent=gene-O5D79_003386;Dbxref=NCBI_GP:HJH9164822.1;Name=HJH9164822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750824.1;locus_tag=O5D79_003386;product=hypothetical protein;protein_id=HJH9164822.1;transl_table=11 DALFDJ020000018.1 tpg gene 90659 91117 . - . ID=gene-O5D79_003387;Name=O5D79_003387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003387 DALFDJ020000018.1 Protein Homology CDS 90659 91117 . - 0 ID=cds-HJH9164823.1;Parent=gene-O5D79_003387;Dbxref=NCBI_GP:HJH9164823.1;Name=HJH9164823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750825.1;locus_tag=O5D79_003387;product=hypothetical protein;protein_id=HJH9164823.1;transl_table=11 DALFDJ020000018.1 tpg gene 91142 91399 . - . ID=gene-O5D79_003388;Name=O5D79_003388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003388 DALFDJ020000018.1 Protein Homology CDS 91142 91399 . - 0 ID=cds-HJH9164824.1;Parent=gene-O5D79_003388;Dbxref=NCBI_GP:HJH9164824.1;Name=HJH9164824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750826.1;locus_tag=O5D79_003388;product=hypothetical protein;protein_id=HJH9164824.1;transl_table=11 DALFDJ020000018.1 tpg gene 91559 92545 . - . ID=gene-O5D79_003389;Name=O5D79_003389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003389 DALFDJ020000018.1 Protein Homology CDS 91559 92545 . - 0 ID=cds-HJH9164825.1;Parent=gene-O5D79_003389;Dbxref=NCBI_GP:HJH9164825.1;Name=HJH9164825.1;Ontology_term=GO:0003697,GO:0008237,GO:0008270;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006781408.1;locus_tag=O5D79_003389;product=ArdC family protein;protein_id=HJH9164825.1;transl_table=11 DALFDJ020000018.1 tpg gene 92867 93244 . - . ID=gene-O5D79_003390;Name=O5D79_003390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003390 DALFDJ020000018.1 Protein Homology CDS 92867 93244 . - 0 ID=cds-HJH9164826.1;Parent=gene-O5D79_003390;Dbxref=NCBI_GP:HJH9164826.1;Name=HJH9164826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103837.1;locus_tag=O5D79_003390;product=hypothetical protein;protein_id=HJH9164826.1;transl_table=11 DALFDJ020000018.1 tpg gene 93395 93832 . - . ID=gene-O5D79_003391;Name=O5D79_003391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003391 DALFDJ020000018.1 GeneMarkS-2+ CDS 93395 93832 . - 0 ID=cds-HJH9164827.1;Parent=gene-O5D79_003391;Dbxref=NCBI_GP:HJH9164827.1;Name=HJH9164827.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_003391;product=hypothetical protein;protein_id=HJH9164827.1;transl_table=11 DALFDJ020000018.1 tpg gene 95245 96162 . - . ID=gene-O5D79_003392;Name=O5D79_003392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003392 DALFDJ020000018.1 Protein Homology CDS 95245 96162 . - 0 ID=cds-HJH9164828.1;Parent=gene-O5D79_003392;Dbxref=NCBI_GP:HJH9164828.1;Name=HJH9164828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010846572.1;locus_tag=O5D79_003392;product=integrase domain-containing protein;protein_id=HJH9164828.1;transl_table=11 DALFDJ020000018.1 tpg gene 97329 97943 . - . ID=gene-O5D79_003393;Name=O5D79_003393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003393 DALFDJ020000018.1 Protein Homology CDS 97329 97943 . - 0 ID=cds-HJH9164829.1;Parent=gene-O5D79_003393;Dbxref=NCBI_GP:HJH9164829.1;Name=HJH9164829.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022590.6;locus_tag=O5D79_003393;product=DUF2913 family protein;protein_id=HJH9164829.1;transl_table=11 DALFDJ020000018.1 tpg gene 98054 98329 . - . ID=gene-O5D79_003394;Name=O5D79_003394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003394 DALFDJ020000018.1 GeneMarkS-2+ CDS 98054 98329 . - 0 ID=cds-HJH9164830.1;Parent=gene-O5D79_003394;Dbxref=NCBI_GP:HJH9164830.1;Name=HJH9164830.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_003394;product=hypothetical protein;protein_id=HJH9164830.1;transl_table=11 DALFDJ020000018.1 tpg gene 98407 98664 . - . ID=gene-O5D79_003395;Name=O5D79_003395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003395 DALFDJ020000018.1 GeneMarkS-2+ CDS 98407 98664 . - 0 ID=cds-HJH9164831.1;Parent=gene-O5D79_003395;Dbxref=NCBI_GP:HJH9164831.1;Name=HJH9164831.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_003395;product=hypothetical protein;protein_id=HJH9164831.1;transl_table=11 DALFDJ020000018.1 tpg gene 98951 99196 . + . ID=gene-O5D79_003396;Name=O5D79_003396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003396 DALFDJ020000018.1 Protein Homology CDS 98951 99196 . + 0 ID=cds-HJH9164832.1;Parent=gene-O5D79_003396;Dbxref=NCBI_GP:HJH9164832.1;Name=HJH9164832.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017845.6;locus_tag=O5D79_003396;product=PerC family transcriptional regulator;protein_id=HJH9164832.1;transl_table=11 DALFDJ020000018.1 tpg gene 99585 99905 . - . ID=gene-O5D79_003397;Name=O5D79_003397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003397 DALFDJ020000018.1 GeneMarkS-2+ CDS 99585 99905 . - 0 ID=cds-HJH9164833.1;Parent=gene-O5D79_003397;Dbxref=NCBI_GP:HJH9164833.1;Name=HJH9164833.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_003397;product=hypothetical protein;protein_id=HJH9164833.1;transl_table=11 DALFDJ020000018.1 tpg gene 100144 101193 . + . ID=gene-O5D79_003398;Name=O5D79_003398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003398 DALFDJ020000018.1 Protein Homology CDS 100144 101193 . + 0 ID=cds-HJH9164834.1;Parent=gene-O5D79_003398;Dbxref=NCBI_GP:HJH9164834.1;Name=HJH9164834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000093039.1;locus_tag=O5D79_003398;product=TQO small subunit DoxD;protein_id=HJH9164834.1;transl_table=11 DALFDJ020000018.1 tpg gene 101688 101969 . - . ID=gene-O5D79_003399;Name=O5D79_003399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003399 DALFDJ020000018.1 GeneMarkS-2+ CDS 101688 101969 . - 0 ID=cds-HJH9164835.1;Parent=gene-O5D79_003399;Dbxref=NCBI_GP:HJH9164835.1;Name=HJH9164835.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_003399;product=hypothetical protein;protein_id=HJH9164835.1;transl_table=11 DALFDJ020000018.1 tpg gene 102009 102581 . - . ID=gene-O5D79_003400;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=O5D79_003400 DALFDJ020000018.1 Protein Homology CDS 102009 102581 . - 0 ID=cds-HJH9164836.1;Parent=gene-O5D79_003400;Dbxref=NCBI_GP:HJH9164836.1;Name=HJH9164836.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750838.1;locus_tag=O5D79_003400;product=acetate uptake transporter;protein_id=HJH9164836.1;transl_table=11 DALFDJ020000018.1 tpg gene 103590 104924 . + . ID=gene-O5D79_003401;Name=O5D79_003401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003401 DALFDJ020000018.1 Protein Homology CDS 103590 104924 . + 0 ID=cds-HJH9164837.1;Parent=gene-O5D79_003401;Dbxref=NCBI_GP:HJH9164837.1;Name=HJH9164837.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750839.1;locus_tag=O5D79_003401;product=amino acid permease;protein_id=HJH9164837.1;transl_table=11 DALFDJ020000018.1 tpg gene 104940 106067 . + . ID=gene-O5D79_003402;Name=O5D79_003402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003402 DALFDJ020000018.1 Protein Homology CDS 104940 106067 . + 0 ID=cds-HJH9164838.1;Parent=gene-O5D79_003402;Dbxref=NCBI_GP:HJH9164838.1;Name=HJH9164838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750840.1;locus_tag=O5D79_003402;product=histidine decarboxylase;protein_id=HJH9164838.1;transl_table=11 DALFDJ020000018.1 tpg gene 106165 107550 . + . ID=gene-O5D79_003403;Name=O5D79_003403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003403 DALFDJ020000018.1 Protein Homology CDS 106165 107550 . + 0 ID=cds-HJH9164839.1;Parent=gene-O5D79_003403;Dbxref=NCBI_GP:HJH9164839.1;Name=HJH9164839.1;Ontology_term=GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;inference=COORDINATES: protein motif:HMM:NF015515.6;locus_tag=O5D79_003403;product=Na+/H+ antiporter NhaC family protein;protein_id=HJH9164839.1;transl_table=11 DALFDJ020000018.1 tpg gene 107550 108341 . + . ID=gene-O5D79_003404;Name=O5D79_003404;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003404 DALFDJ020000018.1 Protein Homology CDS 107550 108341 . + 0 ID=cds-HJH9164840.1;Parent=gene-O5D79_003404;Dbxref=NCBI_GP:HJH9164840.1;Name=HJH9164840.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012354.6;locus_tag=O5D79_003404;product=LysR family transcriptional regulator;protein_id=HJH9164840.1;transl_table=11 DALFDJ020000018.1 tpg gene 110249 111142 . + . ID=gene-O5D79_003405;Name=O5D79_003405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003405 DALFDJ020000018.1 Protein Homology CDS 110249 111142 . + 0 ID=cds-HJH9164841.1;Parent=gene-O5D79_003405;Dbxref=NCBI_GP:HJH9164841.1;Name=HJH9164841.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: protein motif:HMM:NF016362.6;locus_tag=O5D79_003405;product=restriction endonuclease;protein_id=HJH9164841.1;transl_table=11 DALFDJ020000018.1 tpg gene 111520 112017 . - . ID=gene-O5D79_003406;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=O5D79_003406 DALFDJ020000018.1 Protein Homology CDS 111520 112017 . - 0 ID=cds-HJH9164842.1;Parent=gene-O5D79_003406;Dbxref=NCBI_GP:HJH9164842.1;Name=HJH9164842.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750844.1;locus_tag=O5D79_003406;product=non-heme ferritin;protein_id=HJH9164842.1;transl_table=11 ##sequence-region DALFDJ020000019.1 1 107538 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000019.1 tpg region 1 107538 . + . ID=DALFDJ020000019.1:1..107538;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000019.1 tpg gene 85 169 . - . ID=gene-O5D79_003407;Name=O5D79_003407;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_003407 DALFDJ020000019.1 tRNAscan-SE tRNA 85 169 . - . ID=rna-O5D79_003407;Parent=gene-O5D79_003407;anticodon=(pos:complement(133..135));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003407;product=tRNA-Tyr DALFDJ020000019.1 tRNAscan-SE exon 85 169 . - . ID=exon-O5D79_003407-1;Parent=rna-O5D79_003407;anticodon=(pos:complement(133..135));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003407;product=tRNA-Tyr DALFDJ020000019.1 tpg gene 204 335 . - . ID=gene-O5D79_003408;Name=O5D79_003408;gbkey=Gene;gene_biotype=ncRNA;locus_tag=O5D79_003408 DALFDJ020000019.1 cmsearch ncRNA 204 335 . - . ID=rna-O5D79_003408;Parent=gene-O5D79_003408;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_003408;product=RtT sRNA DALFDJ020000019.1 cmsearch exon 204 335 . - . ID=exon-O5D79_003408-1;Parent=rna-O5D79_003408;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_003408;product=RtT sRNA DALFDJ020000019.1 tpg gene 380 464 . - . ID=gene-O5D79_003409;Name=O5D79_003409;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_003409 DALFDJ020000019.1 tRNAscan-SE tRNA 380 464 . - . ID=rna-O5D79_003409;Parent=gene-O5D79_003409;anticodon=(pos:complement(428..430));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003409;product=tRNA-Tyr DALFDJ020000019.1 tRNAscan-SE exon 380 464 . - . ID=exon-O5D79_003409-1;Parent=rna-O5D79_003409;anticodon=(pos:complement(428..430));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003409;product=tRNA-Tyr DALFDJ020000019.1 tpg gene 493 634 . - . ID=gene-O5D79_003410;Name=O5D79_003410;gbkey=Gene;gene_biotype=ncRNA;locus_tag=O5D79_003410 DALFDJ020000019.1 cmsearch ncRNA 493 634 . - . ID=rna-O5D79_003410;Parent=gene-O5D79_003410;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_003410;product=RtT sRNA DALFDJ020000019.1 cmsearch exon 493 634 . - . ID=exon-O5D79_003410-1;Parent=rna-O5D79_003410;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_003410;product=RtT sRNA DALFDJ020000019.1 tpg gene 805 1647 . - . ID=gene-O5D79_003411;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=O5D79_003411 DALFDJ020000019.1 Protein Homology CDS 805 1647 . - 0 ID=cds-HJH9164843.1;Parent=gene-O5D79_003411;Dbxref=NCBI_GP:HJH9164843.1;Name=HJH9164843.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460715.1;locus_tag=O5D79_003411;product=formyltetrahydrofolate deformylase;protein_id=HJH9164843.1;transl_table=11 DALFDJ020000019.1 tpg gene 1698 2156 . - . ID=gene-O5D79_003412;Name=O5D79_003412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003412 DALFDJ020000019.1 Protein Homology CDS 1698 2156 . - 0 ID=cds-HJH9164844.1;Parent=gene-O5D79_003412;Dbxref=NCBI_GP:HJH9164844.1;Name=HJH9164844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460714.1;locus_tag=O5D79_003412;product=YchJ family protein;protein_id=HJH9164844.1;transl_table=11 DALFDJ020000019.1 tpg gene 2267 3172 . + . ID=gene-O5D79_003413;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=O5D79_003413 DALFDJ020000019.1 Protein Homology CDS 2267 3172 . + 0 ID=cds-HJH9164845.1;Parent=gene-O5D79_003413;Dbxref=NCBI_GP:HJH9164845.1;Name=HJH9164845.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460713.1;locus_tag=O5D79_003413;product=patatin-like phospholipase RssA;protein_id=HJH9164845.1;transl_table=11 DALFDJ020000019.1 tpg gene 3263 4276 . + . ID=gene-O5D79_003414;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=O5D79_003414 DALFDJ020000019.1 Protein Homology CDS 3263 4276 . + 0 ID=cds-HJH9164846.1;Parent=gene-O5D79_003414;Dbxref=NCBI_GP:HJH9164846.1;Name=HJH9164846.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460712.1;locus_tag=O5D79_003414;product=two-component system response regulator RssB;protein_id=HJH9164846.1;transl_table=11 DALFDJ020000019.1 tpg gene 4479 5387 . + . ID=gene-O5D79_003415;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=O5D79_003415 DALFDJ020000019.1 Protein Homology CDS 4479 5387 . + 0 ID=cds-HJH9164847.1;Parent=gene-O5D79_003415;Dbxref=NCBI_GP:HJH9164847.1;Name=HJH9164847.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460711.1;locus_tag=O5D79_003415;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=HJH9164847.1;transl_table=11 DALFDJ020000019.1 tpg gene 5519 5932 . - . ID=gene-O5D79_003416;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=O5D79_003416 DALFDJ020000019.1 Protein Homology CDS 5519 5932 . - 0 ID=cds-HJH9164848.1;Parent=gene-O5D79_003416;Dbxref=NCBI_GP:HJH9164848.1;Name=HJH9164848.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460710.1;locus_tag=O5D79_003416;product=histone-like nucleoid-structuring protein H-NS;protein_id=HJH9164848.1;transl_table=11 DALFDJ020000019.1 tpg gene 6595 7212 . + . ID=gene-O5D79_003417;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=O5D79_003417 DALFDJ020000019.1 Protein Homology CDS 6595 7212 . + 0 ID=cds-HJH9164849.1;Parent=gene-O5D79_003417;Dbxref=NCBI_GP:HJH9164849.1;Name=HJH9164849.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460709.1;locus_tag=O5D79_003417;product=thymidine kinase;protein_id=HJH9164849.1;transl_table=11 DALFDJ020000019.1 tpg gene 7409 10087 . - . ID=gene-O5D79_003418;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=O5D79_003418 DALFDJ020000019.1 Protein Homology CDS 7409 10087 . - 0 ID=cds-HJH9164850.1;Parent=gene-O5D79_003418;Dbxref=NCBI_GP:HJH9164850.1;Name=HJH9164850.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=O5D79_003418;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=HJH9164850.1;transl_table=11 DALFDJ020000019.1 tpg gene 10564 11211 . + . ID=gene-O5D79_003419;Name=O5D79_003419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003419 DALFDJ020000019.1 Protein Homology CDS 10564 11211 . + 0 ID=cds-HJH9164851.1;Parent=gene-O5D79_003419;Dbxref=NCBI_GP:HJH9164851.1;Name=HJH9164851.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460707.1;locus_tag=O5D79_003419;product=YchE family NAAT transporter;protein_id=HJH9164851.1;transl_table=11 DALFDJ020000019.1 tpg gene 12000 13631 . + . ID=gene-O5D79_003420;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=O5D79_003420 DALFDJ020000019.1 Protein Homology CDS 12000 13631 . + 0 ID=cds-HJH9164852.1;Parent=gene-O5D79_003420;Dbxref=NCBI_GP:HJH9164852.1;Name=HJH9164852.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001672805.1;locus_tag=O5D79_003420;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=HJH9164852.1;transl_table=11 DALFDJ020000019.1 tpg gene 13753 14673 . + . ID=gene-O5D79_003421;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=O5D79_003421 DALFDJ020000019.1 Protein Homology CDS 13753 14673 . + 0 ID=cds-HJH9164853.1;Parent=gene-O5D79_003421;Dbxref=NCBI_GP:HJH9164853.1;Name=HJH9164853.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=O5D79_003421;product=oligopeptide ABC transporter permease OppB;protein_id=HJH9164853.1;transl_table=11 DALFDJ020000019.1 tpg gene 14688 15596 . + . ID=gene-O5D79_003422;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=O5D79_003422 DALFDJ020000019.1 Protein Homology CDS 14688 15596 . + 0 ID=cds-HJH9164854.1;Parent=gene-O5D79_003422;Dbxref=NCBI_GP:HJH9164854.1;Name=HJH9164854.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=O5D79_003422;product=oligopeptide ABC transporter permease OppC;protein_id=HJH9164854.1;transl_table=11 DALFDJ020000019.1 tpg gene 15608 16615 . + . ID=gene-O5D79_003423;Name=O5D79_003423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003423 DALFDJ020000019.1 Protein Homology CDS 15608 16615 . + 0 ID=cds-HJH9164855.1;Parent=gene-O5D79_003423;Dbxref=NCBI_GP:HJH9164855.1;Name=HJH9164855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460702.1;locus_tag=O5D79_003423;product=ABC transporter ATP-binding protein;protein_id=HJH9164855.1;transl_table=11 DALFDJ020000019.1 tpg gene 16612 17616 . + . ID=gene-O5D79_003424;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=O5D79_003424 DALFDJ020000019.1 Protein Homology CDS 16612 17616 . + 0 ID=cds-HJH9164856.1;Parent=gene-O5D79_003424;Dbxref=NCBI_GP:HJH9164856.1;Name=HJH9164856.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506804.1;locus_tag=O5D79_003424;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=HJH9164856.1;transl_table=11 DALFDJ020000019.1 tpg gene 17664 18500 . + . ID=gene-O5D79_003425;Name=O5D79_003425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003425 DALFDJ020000019.1 Protein Homology CDS 17664 18500 . + 0 ID=cds-HJH9164857.1;Parent=gene-O5D79_003425;Dbxref=NCBI_GP:HJH9164857.1;Name=HJH9164857.1;Ontology_term=GO:0006811,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460700.1;locus_tag=O5D79_003425;product=ion transporter;protein_id=HJH9164857.1;transl_table=11 DALFDJ020000019.1 tpg gene 18548 18877 . - . ID=gene-O5D79_003426;Name=O5D79_003426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003426 DALFDJ020000019.1 Protein Homology CDS 18548 18877 . - 0 ID=cds-HJH9164858.1;Parent=gene-O5D79_003426;Dbxref=NCBI_GP:HJH9164858.1;Name=HJH9164858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448158.1;locus_tag=O5D79_003426;product=HI1450 family dsDNA-mimic protein;protein_id=HJH9164858.1;transl_table=11 DALFDJ020000019.1 tpg gene 18911 20371 . - . ID=gene-O5D79_003427;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=O5D79_003427 DALFDJ020000019.1 Protein Homology CDS 18911 20371 . - 0 ID=cds-HJH9164859.1;Parent=gene-O5D79_003427;Dbxref=NCBI_GP:HJH9164859.1;Name=HJH9164859.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=O5D79_003427;product=cardiolipin synthase;protein_id=HJH9164859.1;transl_table=11 DALFDJ020000019.1 tpg gene 20514 20687 . + . ID=gene-O5D79_003428;Name=O5D79_003428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003428 DALFDJ020000019.1 Protein Homology CDS 20514 20687 . + 0 ID=cds-HJH9164860.1;Parent=gene-O5D79_003428;Dbxref=NCBI_GP:HJH9164860.1;Name=HJH9164860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=O5D79_003428;product=YciY family protein;protein_id=HJH9164860.1;transl_table=11 DALFDJ020000019.1 tpg gene 20731 21027 . - . ID=gene-O5D79_003429;Name=O5D79_003429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003429 DALFDJ020000019.1 Protein Homology CDS 20731 21027 . - 0 ID=cds-HJH9164861.1;Parent=gene-O5D79_003429;Dbxref=NCBI_GP:HJH9164861.1;Name=HJH9164861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460697.1;locus_tag=O5D79_003429;product=YciI family protein;protein_id=HJH9164861.1;transl_table=11 DALFDJ020000019.1 tpg gene 21251 21979 . + . ID=gene-O5D79_003430;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=O5D79_003430 DALFDJ020000019.1 Protein Homology CDS 21251 21979 . + 0 ID=cds-HJH9164862.1;Parent=gene-O5D79_003430;Dbxref=NCBI_GP:HJH9164862.1;Name=HJH9164862.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460696.1;locus_tag=O5D79_003430;product=TonB system transport protein TonB;protein_id=HJH9164862.1;transl_table=11 DALFDJ020000019.1 tpg gene 22039 22440 . - . ID=gene-O5D79_003431;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=O5D79_003431 DALFDJ020000019.1 Protein Homology CDS 22039 22440 . - 0 ID=cds-HJH9164863.1;Parent=gene-O5D79_003431;Dbxref=NCBI_GP:HJH9164863.1;Name=HJH9164863.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460695.1;locus_tag=O5D79_003431;product=acyl-CoA thioester hydrolase YciA;protein_id=HJH9164863.1;transl_table=11 DALFDJ020000019.1 tpg gene 22601 23140 . - . ID=gene-O5D79_003432;Name=O5D79_003432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003432 DALFDJ020000019.1 Protein Homology CDS 22601 23140 . - 0 ID=cds-HJH9164864.1;Parent=gene-O5D79_003432;Dbxref=NCBI_GP:HJH9164864.1;Name=HJH9164864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460694.1;locus_tag=O5D79_003432;product=septation protein A;protein_id=HJH9164864.1;transl_table=11 DALFDJ020000019.1 tpg gene 23197 23940 . - . ID=gene-O5D79_003433;Name=O5D79_003433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003433 DALFDJ020000019.1 Protein Homology CDS 23197 23940 . - 0 ID=cds-HJH9164865.1;Parent=gene-O5D79_003433;Dbxref=NCBI_GP:HJH9164865.1;Name=HJH9164865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=O5D79_003433;product=YciC family protein;protein_id=HJH9164865.1;transl_table=11 DALFDJ020000019.1 tpg gene 23966 24370 . - . ID=gene-O5D79_003434;Name=O5D79_003434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003434 DALFDJ020000019.1 Protein Homology CDS 23966 24370 . - 0 ID=cds-HJH9164866.1;Parent=gene-O5D79_003434;Dbxref=NCBI_GP:HJH9164866.1;Name=HJH9164866.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=O5D79_003434;product=YkgJ family cysteine cluster protein;protein_id=HJH9164866.1;transl_table=11 DALFDJ020000019.1 tpg gene 24706 25344 . + . ID=gene-O5D79_003435;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=O5D79_003435 DALFDJ020000019.1 Protein Homology CDS 24706 25344 . + 0 ID=cds-HJH9164867.1;Parent=gene-O5D79_003435;Dbxref=NCBI_GP:HJH9164867.1;Name=HJH9164867.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460691.1;locus_tag=O5D79_003435;product=outer membrane protein OmpW;protein_id=HJH9164867.1;transl_table=11 DALFDJ020000019.1 tpg gene 25426 26304 . - . ID=gene-O5D79_003436;Name=O5D79_003436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003436 DALFDJ020000019.1 Protein Homology CDS 25426 26304 . - 0 ID=cds-HJH9164868.1;Parent=gene-O5D79_003436;Dbxref=NCBI_GP:HJH9164868.1;Name=HJH9164868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460690.1;locus_tag=O5D79_003436;product=manganese catalase family protein;protein_id=HJH9164868.1;transl_table=11 DALFDJ020000019.1 tpg gene 26324 26830 . - . ID=gene-O5D79_003437;Name=O5D79_003437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003437 DALFDJ020000019.1 Protein Homology CDS 26324 26830 . - 0 ID=cds-HJH9164869.1;Parent=gene-O5D79_003437;Dbxref=NCBI_GP:HJH9164869.1;Name=HJH9164869.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460689.1;locus_tag=O5D79_003437;product=ferritin-like domain-containing protein;protein_id=HJH9164869.1;transl_table=11 DALFDJ020000019.1 tpg gene 26904 27407 . - . ID=gene-O5D79_003438;Name=O5D79_003438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003438 DALFDJ020000019.1 Protein Homology CDS 26904 27407 . - 0 ID=cds-HJH9164870.1;Parent=gene-O5D79_003438;Dbxref=NCBI_GP:HJH9164870.1;Name=HJH9164870.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460688.1;locus_tag=O5D79_003438;product=ferritin-like domain-containing protein;protein_id=HJH9164870.1;transl_table=11 DALFDJ020000019.1 tpg gene 27497 27679 . - . ID=gene-O5D79_003439;Name=O5D79_003439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003439 DALFDJ020000019.1 Protein Homology CDS 27497 27679 . - 0 ID=cds-HJH9164871.1;Parent=gene-O5D79_003439;Dbxref=NCBI_GP:HJH9164871.1;Name=HJH9164871.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460687.1;locus_tag=O5D79_003439;product=general stress protein;protein_id=HJH9164871.1;transl_table=11 DALFDJ020000019.1 tpg gene 28159 28965 . - . ID=gene-O5D79_003440;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=O5D79_003440 DALFDJ020000019.1 Protein Homology CDS 28159 28965 . - 0 ID=cds-HJH9164872.1;Parent=gene-O5D79_003440;Dbxref=NCBI_GP:HJH9164872.1;Name=HJH9164872.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460686.1;locus_tag=O5D79_003440;product=tryptophan synthase subunit alpha;protein_id=HJH9164872.1;transl_table=11 DALFDJ020000019.1 tpg gene 28965 30158 . - . ID=gene-O5D79_003441;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=O5D79_003441 DALFDJ020000019.1 Protein Homology CDS 28965 30158 . - 0 ID=cds-HJH9164873.1;Parent=gene-O5D79_003441;Dbxref=NCBI_GP:HJH9164873.1;Name=HJH9164873.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460685.1;locus_tag=O5D79_003441;product=tryptophan synthase subunit beta;protein_id=HJH9164873.1;transl_table=11 DALFDJ020000019.1 tpg gene 30168 31526 . - . ID=gene-O5D79_003442;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=O5D79_003442 DALFDJ020000019.1 Protein Homology CDS 30168 31526 . - 0 ID=cds-HJH9164874.1;Parent=gene-O5D79_003442;Dbxref=NCBI_GP:HJH9164874.1;Name=HJH9164874.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460684.1;locus_tag=O5D79_003442;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=HJH9164874.1;transl_table=11 DALFDJ020000019.1 tpg gene 31530 33125 . - . ID=gene-O5D79_003443;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=O5D79_003443 DALFDJ020000019.1 Protein Homology CDS 31530 33125 . - 0 ID=cds-HJH9164875.1;Parent=gene-O5D79_003443;Dbxref=NCBI_GP:HJH9164875.1;Name=HJH9164875.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=O5D79_003443;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=HJH9164875.1;transl_table=11 DALFDJ020000019.1 tpg gene 33125 34687 . - . ID=gene-O5D79_003444;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=O5D79_003444 DALFDJ020000019.1 Protein Homology CDS 33125 34687 . - 0 ID=cds-HJH9164876.1;Parent=gene-O5D79_003444;Dbxref=NCBI_GP:HJH9164876.1;Name=HJH9164876.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460682.1;locus_tag=O5D79_003444;product=anthranilate synthase component I;protein_id=HJH9164876.1;transl_table=11 DALFDJ020000019.1 cmsearch sequence_feature 34710 34805 . - . ID=id-DALFDJ020000019.1:34710..34805;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 DALFDJ020000019.1 tpg gene 34782 34826 . - . ID=gene-O5D79_003445;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=O5D79_003445 DALFDJ020000019.1 Protein Homology CDS 34782 34826 . - 0 ID=cds-HJH9164877.1;Parent=gene-O5D79_003445;Dbxref=NCBI_GP:HJH9164877.1;Name=HJH9164877.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=O5D79_003445;product=trp operon leader peptide;protein_id=HJH9164877.1;transl_table=11 DALFDJ020000019.1 tpg gene 34948 35829 . + . ID=gene-O5D79_003446;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=O5D79_003446 DALFDJ020000019.1 Protein Homology CDS 34948 35829 . + 0 ID=cds-HJH9164878.1;Parent=gene-O5D79_003446;Dbxref=NCBI_GP:HJH9164878.1;Name=HJH9164878.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460680.1;locus_tag=O5D79_003446;product=RNase RNM;protein_id=HJH9164878.1;transl_table=11 DALFDJ020000019.1 tpg gene 35837 36457 . + . ID=gene-O5D79_003447;Name=O5D79_003447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003447 DALFDJ020000019.1 Protein Homology CDS 35837 36457 . + 0 ID=cds-HJH9164879.1;Parent=gene-O5D79_003447;Dbxref=NCBI_GP:HJH9164879.1;Name=HJH9164879.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=O5D79_003447;product=L-threonylcarbamoyladenylate synthase;protein_id=HJH9164879.1;transl_table=11 DALFDJ020000019.1 tpg gene 36558 37433 . + . ID=gene-O5D79_003448;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=O5D79_003448 DALFDJ020000019.1 Protein Homology CDS 36558 37433 . + 0 ID=cds-HJH9164880.1;Parent=gene-O5D79_003448;Dbxref=NCBI_GP:HJH9164880.1;Name=HJH9164880.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=O5D79_003448;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=HJH9164880.1;transl_table=11 DALFDJ020000019.1 tpg gene 37520 38110 . - . ID=gene-O5D79_003449;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=O5D79_003449 DALFDJ020000019.1 Protein Homology CDS 37520 38110 . - 0 ID=cds-HJH9164881.1;Parent=gene-O5D79_003449;Dbxref=NCBI_GP:HJH9164881.1;Name=HJH9164881.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460677.1;locus_tag=O5D79_003449;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=HJH9164881.1;transl_table=11 DALFDJ020000019.1 tpg gene 38107 38868 . - . ID=gene-O5D79_003450;Name=O5D79_003450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003450 DALFDJ020000019.1 Protein Homology CDS 38107 38868 . - 0 ID=cds-HJH9164882.1;Parent=gene-O5D79_003450;Dbxref=NCBI_GP:HJH9164882.1;Name=HJH9164882.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460676.1;locus_tag=O5D79_003450;product=YciK family oxidoreductase;protein_id=HJH9164882.1;transl_table=11 DALFDJ020000019.1 tpg gene 39106 40152 . + . ID=gene-O5D79_003451;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=O5D79_003451 DALFDJ020000019.1 Protein Homology CDS 39106 40152 . + 0 ID=cds-HJH9164883.1;Parent=gene-O5D79_003451;Dbxref=NCBI_GP:HJH9164883.1;Name=HJH9164883.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460675.1;locus_tag=O5D79_003451;product=protease SohB;protein_id=HJH9164883.1;transl_table=11 DALFDJ020000019.1 tpg gene 40194 40445 . - . ID=gene-O5D79_003452;Name=O5D79_003452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003452 DALFDJ020000019.1 Protein Homology CDS 40194 40445 . - 0 ID=cds-HJH9164884.1;Parent=gene-O5D79_003452;Dbxref=NCBI_GP:HJH9164884.1;Name=HJH9164884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460674.1;locus_tag=O5D79_003452;product=YciN family protein;protein_id=HJH9164884.1;transl_table=11 DALFDJ020000019.1 tpg gene 40848 43445 . + . ID=gene-O5D79_003453;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=O5D79_003453 DALFDJ020000019.1 Protein Homology CDS 40848 43445 . + 0 ID=cds-HJH9164885.1;Parent=gene-O5D79_003453;Dbxref=NCBI_GP:HJH9164885.1;Name=HJH9164885.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=O5D79_003453;product=type I DNA topoisomerase;protein_id=HJH9164885.1;transl_table=11 DALFDJ020000019.1 tpg gene 43856 44830 . + . ID=gene-O5D79_003454;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=O5D79_003454 DALFDJ020000019.1 Protein Homology CDS 43856 44830 . + 0 ID=cds-HJH9164886.1;Parent=gene-O5D79_003454;Dbxref=NCBI_GP:HJH9164886.1;Name=HJH9164886.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=O5D79_003454;product=HTH-type transcriptional regulator CysB;protein_id=HJH9164886.1;transl_table=11 DALFDJ020000019.1 tpg gene 45111 45251 . + . ID=gene-O5D79_003455;Name=O5D79_003455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003455 DALFDJ020000019.1 Protein Homology CDS 45111 45251 . + 0 ID=cds-HJH9164887.1;Parent=gene-O5D79_003455;Dbxref=NCBI_GP:HJH9164887.1;Name=HJH9164887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=O5D79_003455;product=YmiA family putative membrane protein;protein_id=HJH9164887.1;transl_table=11 DALFDJ020000019.1 tpg gene 45532 45624 . + . ID=gene-O5D79_003456;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=O5D79_003456 DALFDJ020000019.1 Protein Homology CDS 45532 45624 . + 0 ID=cds-HJH9164888.1;Parent=gene-O5D79_003456;Dbxref=NCBI_GP:HJH9164888.1;Name=HJH9164888.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_226998799.1;locus_tag=O5D79_003456;product=small membrane protein YmiC;protein_id=HJH9164888.1;transl_table=11 DALFDJ020000019.1 tpg gene 45807 48482 . + . ID=gene-O5D79_003457;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=O5D79_003457 DALFDJ020000019.1 Protein Homology CDS 45807 48482 . + 0 ID=cds-HJH9164889.1;Parent=gene-O5D79_003457;Dbxref=NCBI_GP:HJH9164889.1;Name=HJH9164889.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460671.1;locus_tag=O5D79_003457;product=aconitate hydratase AcnA;protein_id=HJH9164889.1;transl_table=11 DALFDJ020000019.1 tpg gene 48538 49128 . - . ID=gene-O5D79_003458;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=O5D79_003458 DALFDJ020000019.1 Protein Homology CDS 48538 49128 . - 0 ID=cds-HJH9164890.1;Parent=gene-O5D79_003458;Dbxref=NCBI_GP:HJH9164890.1;Name=HJH9164890.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460670.1;locus_tag=O5D79_003458;product=GTP cyclohydrolase II;protein_id=HJH9164890.1;transl_table=11 DALFDJ020000019.1 tpg gene 49324 50088 . + . ID=gene-O5D79_003459;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=O5D79_003459 DALFDJ020000019.1 Protein Homology CDS 49324 50088 . + 0 ID=cds-HJH9164891.1;Parent=gene-O5D79_003459;Dbxref=NCBI_GP:HJH9164891.1;Name=HJH9164891.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460669.1;locus_tag=O5D79_003459;product=phosphatidylglycerophosphatase B;protein_id=HJH9164891.1;transl_table=11 DALFDJ020000019.1 tpg gene 50238 50546 . + . ID=gene-O5D79_003460;Name=O5D79_003460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003460 DALFDJ020000019.1 Protein Homology CDS 50238 50546 . + 0 ID=cds-HJH9164892.1;Parent=gene-O5D79_003460;Dbxref=NCBI_GP:HJH9164892.1;Name=HJH9164892.1;Ontology_term=GO:0008653,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460668.1;locus_tag=O5D79_003460;product=LapA family protein;protein_id=HJH9164892.1;transl_table=11 DALFDJ020000019.1 tpg gene 50553 51722 . + . ID=gene-O5D79_003461;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=O5D79_003461 DALFDJ020000019.1 Protein Homology CDS 50553 51722 . + 0 ID=cds-HJH9164893.1;Parent=gene-O5D79_003461;Dbxref=NCBI_GP:HJH9164893.1;Name=HJH9164893.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=O5D79_003461;product=lipopolysaccharide assembly protein LapB;protein_id=HJH9164893.1;transl_table=11 DALFDJ020000019.1 tpg gene 51913 52650 . + . ID=gene-O5D79_003462;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=O5D79_003462 DALFDJ020000019.1 Protein Homology CDS 51913 52650 . + 0 ID=cds-HJH9164894.1;Parent=gene-O5D79_003462;Dbxref=NCBI_GP:HJH9164894.1;Name=HJH9164894.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460666.1;locus_tag=O5D79_003462;product=orotidine-5'-phosphate decarboxylase;protein_id=HJH9164894.1;transl_table=11 DALFDJ020000019.1 tpg gene 52650 52976 . + . ID=gene-O5D79_003463;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=O5D79_003463 DALFDJ020000019.1 Protein Homology CDS 52650 52976 . + 0 ID=cds-HJH9164895.1;Parent=gene-O5D79_003463;Dbxref=NCBI_GP:HJH9164895.1;Name=HJH9164895.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460665.1;locus_tag=O5D79_003463;product=stress response translation initiation inhibitor YciH;protein_id=HJH9164895.1;transl_table=11 DALFDJ020000019.1 tpg gene 53096 53314 . - . ID=gene-O5D79_003464;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=O5D79_003464 DALFDJ020000019.1 Protein Homology CDS 53096 53314 . - 0 ID=cds-HJH9164896.1;Parent=gene-O5D79_003464;Dbxref=NCBI_GP:HJH9164896.1;Name=HJH9164896.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=O5D79_003464;product=osmotically-inducible lipoprotein OsmB;protein_id=HJH9164896.1;transl_table=11 DALFDJ020000019.1 tpg gene 53573 54325 . - . ID=gene-O5D79_003465;Name=O5D79_003465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003465 DALFDJ020000019.1 Protein Homology CDS 53573 54325 . - 0 ID=cds-HJH9164897.1;Parent=gene-O5D79_003465;Dbxref=NCBI_GP:HJH9164897.1;Name=HJH9164897.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460663.1;locus_tag=O5D79_003465;product=DNA-binding transcriptional regulator YciT;protein_id=HJH9164897.1;transl_table=11 DALFDJ020000019.1 tpg gene 54412 54591 . - . ID=gene-O5D79_003466;Name=O5D79_003466;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003466 DALFDJ020000019.1 Protein Homology CDS 54412 54591 . - 0 ID=cds-HJH9164898.1;Parent=gene-O5D79_003466;Dbxref=NCBI_GP:HJH9164898.1;Name=HJH9164898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279854.1;locus_tag=O5D79_003466;product=hypothetical protein;protein_id=HJH9164898.1;transl_table=11 DALFDJ020000019.1 tpg gene 54713 56695 . - . ID=gene-O5D79_003467;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=O5D79_003467 DALFDJ020000019.1 Protein Homology CDS 54713 56695 . - 0 ID=cds-HJH9164899.1;Parent=gene-O5D79_003467;Dbxref=NCBI_GP:HJH9164899.1;Name=HJH9164899.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460662.1;locus_tag=O5D79_003467;product=cyclic di-GMP phosphodiesterase;protein_id=HJH9164899.1;transl_table=11 DALFDJ020000019.1 tpg gene 56957 58891 . - . ID=gene-O5D79_003468;Name=O5D79_003468;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003468 DALFDJ020000019.1 Protein Homology CDS 56957 58891 . - 0 ID=cds-HJH9164900.1;Parent=gene-O5D79_003468;Dbxref=NCBI_GP:HJH9164900.1;Name=HJH9164900.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=O5D79_003468;product=exoribonuclease II;protein_id=HJH9164900.1;transl_table=11 DALFDJ020000019.1 tpg pseudogene 59136 60113 . - . ID=gene-O5D79_003469;Name=O5D79_003469;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003469;pseudo=true DALFDJ020000019.1 Protein Homology CDS 59136 60113 . - 0 ID=cds-O5D79_003469;Parent=gene-O5D79_003469;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460660.1;locus_tag=O5D79_003469;product=carboxymuconolactone decarboxylase family protein;pseudo=true;transl_table=11 DALFDJ020000019.1 tpg gene 60313 61101 . - . ID=gene-O5D79_003470;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=O5D79_003470 DALFDJ020000019.1 Protein Homology CDS 60313 61101 . - 0 ID=cds-HJH9164901.1;Parent=gene-O5D79_003470;Dbxref=NCBI_GP:HJH9164901.1;Name=HJH9164901.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=O5D79_003470;product=enoyl-ACP reductase FabI;protein_id=HJH9164901.1;transl_table=11 DALFDJ020000019.1 tpg gene 61219 61518 . - . ID=gene-O5D79_003471;Name=O5D79_003471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003471 DALFDJ020000019.1 Protein Homology CDS 61219 61518 . - 0 ID=cds-HJH9164902.1;Parent=gene-O5D79_003471;Dbxref=NCBI_GP:HJH9164902.1;Name=HJH9164902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460658.1;locus_tag=O5D79_003471;product=hypothetical protein;protein_id=HJH9164902.1;transl_table=11 DALFDJ020000019.1 tpg gene 61493 61672 . - . ID=gene-O5D79_003472;Name=O5D79_003472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003472 DALFDJ020000019.1 Protein Homology CDS 61493 61672 . - 0 ID=cds-HJH9164903.1;Parent=gene-O5D79_003472;Dbxref=NCBI_GP:HJH9164903.1;Name=HJH9164903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460657.1;locus_tag=O5D79_003472;product=hypothetical protein;protein_id=HJH9164903.1;transl_table=11 DALFDJ020000019.1 tpg gene 61707 63080 . + . ID=gene-O5D79_003473;Name=steC;gbkey=Gene;gene=steC;gene_biotype=protein_coding;locus_tag=O5D79_003473 DALFDJ020000019.1 Protein Homology CDS 61707 63080 . + 0 ID=cds-HJH9164904.1;Parent=gene-O5D79_003473;Dbxref=NCBI_GP:HJH9164904.1;Name=HJH9164904.1;gbkey=CDS;gene=steC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460656.1;locus_tag=O5D79_003473;product=SPI-2 type III secretion system effector kinase SteC;protein_id=HJH9164904.1;transl_table=11 DALFDJ020000019.1 tpg gene 63547 64254 . + . ID=gene-O5D79_003474;Name=O5D79_003474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003474 DALFDJ020000019.1 Protein Homology CDS 63547 64254 . + 0 ID=cds-HJH9164905.1;Parent=gene-O5D79_003474;Dbxref=NCBI_GP:HJH9164905.1;Name=HJH9164905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748430.1;locus_tag=O5D79_003474;product=EAL domain-containing protein;protein_id=HJH9164905.1;transl_table=11 DALFDJ020000019.1 tpg gene 64270 65076 . - . ID=gene-O5D79_003475;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=O5D79_003475 DALFDJ020000019.1 Protein Homology CDS 64270 65076 . - 0 ID=cds-HJH9164906.1;Parent=gene-O5D79_003475;Dbxref=NCBI_GP:HJH9164906.1;Name=HJH9164906.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460654.1;locus_tag=O5D79_003475;product=peptide ABC transporter ATP-binding protein SapF;protein_id=HJH9164906.1;transl_table=11 DALFDJ020000019.1 tpg gene 65078 66070 . - . ID=gene-O5D79_003476;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=O5D79_003476 DALFDJ020000019.1 Protein Homology CDS 65078 66070 . - 0 ID=cds-HJH9164907.1;Parent=gene-O5D79_003476;Dbxref=NCBI_GP:HJH9164907.1;Name=HJH9164907.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460653.1;locus_tag=O5D79_003476;product=peptide ABC transporter ATP-binding protein SapD;protein_id=HJH9164907.1;transl_table=11 DALFDJ020000019.1 tpg gene 66070 66960 . - . ID=gene-O5D79_003477;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=O5D79_003477 DALFDJ020000019.1 Protein Homology CDS 66070 66960 . - 0 ID=cds-HJH9164908.1;Parent=gene-O5D79_003477;Dbxref=NCBI_GP:HJH9164908.1;Name=HJH9164908.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460652.1;locus_tag=O5D79_003477;product=peptide ABC transporter permease SapC;protein_id=HJH9164908.1;transl_table=11 DALFDJ020000019.1 tpg gene 66947 67912 . - . ID=gene-O5D79_003478;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=O5D79_003478 DALFDJ020000019.1 Protein Homology CDS 66947 67912 . - 0 ID=cds-HJH9164909.1;Parent=gene-O5D79_003478;Dbxref=NCBI_GP:HJH9164909.1;Name=HJH9164909.1;gbkey=CDS;gene=sapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=O5D79_003478;product=peptide ABC transporter permease SapB;protein_id=HJH9164909.1;transl_table=11 DALFDJ020000019.1 tpg gene 67909 69558 . - . ID=gene-O5D79_003479;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=O5D79_003479 DALFDJ020000019.1 Protein Homology CDS 67909 69558 . - 0 ID=cds-HJH9164910.1;Parent=gene-O5D79_003479;Dbxref=NCBI_GP:HJH9164910.1;Name=HJH9164910.1;gbkey=CDS;gene=sapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=O5D79_003479;product=peptide ABC transporter substrate-binding protein SapA;protein_id=HJH9164910.1;transl_table=11 DALFDJ020000019.1 tpg gene 69670 70650 . - . ID=gene-O5D79_003480;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=O5D79_003480 DALFDJ020000019.1 Protein Homology CDS 69670 70650 . - 0 ID=cds-HJH9164911.1;Parent=gene-O5D79_003480;Dbxref=NCBI_GP:HJH9164911.1;Name=HJH9164911.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460649.1;locus_tag=O5D79_003480;product=phage shock protein operon transcriptional activator;protein_id=HJH9164911.1;transl_table=11 DALFDJ020000019.1 tpg gene 70821 71489 . + . ID=gene-O5D79_003481;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=O5D79_003481 DALFDJ020000019.1 Protein Homology CDS 70821 71489 . + 0 ID=cds-HJH9164912.1;Parent=gene-O5D79_003481;Dbxref=NCBI_GP:HJH9164912.1;Name=HJH9164912.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460648.1;locus_tag=O5D79_003481;product=phage shock protein PspA;protein_id=HJH9164912.1;transl_table=11 DALFDJ020000019.1 tpg gene 71549 71773 . + . ID=gene-O5D79_003482;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=O5D79_003482 DALFDJ020000019.1 Protein Homology CDS 71549 71773 . + 0 ID=cds-HJH9164913.1;Parent=gene-O5D79_003482;Dbxref=NCBI_GP:HJH9164913.1;Name=HJH9164913.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460647.1;locus_tag=O5D79_003482;product=envelope stress response membrane protein PspB;protein_id=HJH9164913.1;transl_table=11 DALFDJ020000019.1 tpg gene 71773 72132 . + . ID=gene-O5D79_003483;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=O5D79_003483 DALFDJ020000019.1 Protein Homology CDS 71773 72132 . + 0 ID=cds-HJH9164914.1;Parent=gene-O5D79_003483;Dbxref=NCBI_GP:HJH9164914.1;Name=HJH9164914.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460646.1;locus_tag=O5D79_003483;product=envelope stress response membrane protein PspC;protein_id=HJH9164914.1;transl_table=11 DALFDJ020000019.1 tpg gene 72155 72373 . + . ID=gene-O5D79_003484;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=O5D79_003484 DALFDJ020000019.1 Protein Homology CDS 72155 72373 . + 0 ID=cds-HJH9164915.1;Parent=gene-O5D79_003484;Dbxref=NCBI_GP:HJH9164915.1;Name=HJH9164915.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460645.1;locus_tag=O5D79_003484;product=phage shock protein PspD;protein_id=HJH9164915.1;transl_table=11 DALFDJ020000019.1 tpg gene 72449 72763 . + . ID=gene-O5D79_003485;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=O5D79_003485 DALFDJ020000019.1 Protein Homology CDS 72449 72763 . + 0 ID=cds-HJH9164916.1;Parent=gene-O5D79_003485;Dbxref=NCBI_GP:HJH9164916.1;Name=HJH9164916.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460644.1;locus_tag=O5D79_003485;product=thiosulfate sulfurtransferase PspE;protein_id=HJH9164916.1;transl_table=11 DALFDJ020000019.1 tpg gene 72912 74309 . + . ID=gene-O5D79_003486;Name=O5D79_003486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003486 DALFDJ020000019.1 Protein Homology CDS 72912 74309 . + 0 ID=cds-HJH9164917.1;Parent=gene-O5D79_003486;Dbxref=NCBI_GP:HJH9164917.1;Name=HJH9164917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=O5D79_003486;product=YcjX family protein;protein_id=HJH9164917.1;transl_table=11 DALFDJ020000019.1 tpg gene 74306 75367 . + . ID=gene-O5D79_003487;Name=O5D79_003487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003487 DALFDJ020000019.1 Protein Homology CDS 74306 75367 . + 0 ID=cds-HJH9164918.1;Parent=gene-O5D79_003487;Dbxref=NCBI_GP:HJH9164918.1;Name=HJH9164918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460642.1;locus_tag=O5D79_003487;product=TIGR01620 family protein;protein_id=HJH9164918.1;transl_table=11 DALFDJ020000019.1 tpg gene 75515 77056 . + . ID=gene-O5D79_003488;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=O5D79_003488 DALFDJ020000019.1 Protein Homology CDS 75515 77056 . + 0 ID=cds-HJH9164919.1;Parent=gene-O5D79_003488;Dbxref=NCBI_GP:HJH9164919.1;Name=HJH9164919.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460641.1;locus_tag=O5D79_003488;product=transcriptional regulator TyrR;protein_id=HJH9164919.1;transl_table=11 DALFDJ020000019.1 tpg gene 77146 77652 . - . ID=gene-O5D79_003489;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=O5D79_003489 DALFDJ020000019.1 Protein Homology CDS 77146 77652 . - 0 ID=cds-HJH9164920.1;Parent=gene-O5D79_003489;Dbxref=NCBI_GP:HJH9164920.1;Name=HJH9164920.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460640.1;locus_tag=O5D79_003489;product=thiol peroxidase;protein_id=HJH9164920.1;transl_table=11 DALFDJ020000019.1 tpg gene 77768 78733 . + . ID=gene-O5D79_003490;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=O5D79_003490 DALFDJ020000019.1 Protein Homology CDS 77768 78733 . + 0 ID=cds-HJH9164921.1;Parent=gene-O5D79_003490;Dbxref=NCBI_GP:HJH9164921.1;Name=HJH9164921.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460639.1;locus_tag=O5D79_003490;product=L-Ala-D/L-Glu epimerase;protein_id=HJH9164921.1;transl_table=11 DALFDJ020000019.1 tpg gene 78708 79436 . - . ID=gene-O5D79_003491;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=O5D79_003491 DALFDJ020000019.1 Protein Homology CDS 78708 79436 . - 0 ID=cds-HJH9164922.1;Parent=gene-O5D79_003491;Dbxref=NCBI_GP:HJH9164922.1;Name=HJH9164922.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460638.1;locus_tag=O5D79_003491;product=murein tripeptide amidase MpaA;protein_id=HJH9164922.1;transl_table=11 DALFDJ020000019.1 tpg gene 79626 81239 . + . ID=gene-O5D79_003492;Name=O5D79_003492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003492 DALFDJ020000019.1 Protein Homology CDS 79626 81239 . + 0 ID=cds-HJH9164923.1;Parent=gene-O5D79_003492;Dbxref=NCBI_GP:HJH9164923.1;Name=HJH9164923.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460637.1;locus_tag=O5D79_003492;product=peptide ABC transporter substrate-binding protein;protein_id=HJH9164923.1;transl_table=11 DALFDJ020000019.1 tpg gene 81336 82265 . - . ID=gene-O5D79_003493;Name=O5D79_003493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003493 DALFDJ020000019.1 Protein Homology CDS 81336 82265 . - 0 ID=cds-HJH9164924.1;Parent=gene-O5D79_003493;Dbxref=NCBI_GP:HJH9164924.1;Name=HJH9164924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460636.1;locus_tag=O5D79_003493;product=aromatic alcohol reductase;protein_id=HJH9164924.1;transl_table=11 DALFDJ020000019.1 tpg gene 82384 83289 . + . ID=gene-O5D79_003494;Name=O5D79_003494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003494 DALFDJ020000019.1 Protein Homology CDS 82384 83289 . + 0 ID=cds-HJH9164925.1;Parent=gene-O5D79_003494;Dbxref=NCBI_GP:HJH9164925.1;Name=HJH9164925.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460635.1;locus_tag=O5D79_003494;product=LysR family transcriptional regulator;protein_id=HJH9164925.1;transl_table=11 DALFDJ020000019.1 tpg gene 83566 84435 . + . ID=gene-O5D79_003495;Name=O5D79_003495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003495 DALFDJ020000019.1 Protein Homology CDS 83566 84435 . + 0 ID=cds-HJH9164926.1;Parent=gene-O5D79_003495;Dbxref=NCBI_GP:HJH9164926.1;Name=HJH9164926.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460634.1;locus_tag=O5D79_003495;product=aldo/keto reductase;protein_id=HJH9164926.1;transl_table=11 DALFDJ020000019.1 tpg gene 84526 85239 . - . ID=gene-O5D79_003496;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=O5D79_003496 DALFDJ020000019.1 Protein Homology CDS 84526 85239 . - 0 ID=cds-HJH9164927.1;Parent=gene-O5D79_003496;Dbxref=NCBI_GP:HJH9164927.1;Name=HJH9164927.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460633.1;locus_tag=O5D79_003496;product=SDR family oxidoreductase;protein_id=HJH9164927.1;transl_table=11 DALFDJ020000019.1 tpg gene 85317 85907 . + . ID=gene-O5D79_003497;Name=O5D79_003497;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003497 DALFDJ020000019.1 Protein Homology CDS 85317 85907 . + 0 ID=cds-HJH9164928.1;Parent=gene-O5D79_003497;Dbxref=NCBI_GP:HJH9164928.1;Name=HJH9164928.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460632.1;locus_tag=O5D79_003497;product=TetR/AcrR family transcriptional regulator;protein_id=HJH9164928.1;transl_table=11 DALFDJ020000019.1 tpg gene 86036 86272 . + . ID=gene-O5D79_003498;Name=O5D79_003498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003498 DALFDJ020000019.1 Protein Homology CDS 86036 86272 . + 0 ID=cds-HJH9164929.1;Parent=gene-O5D79_003498;Dbxref=NCBI_GP:HJH9164929.1;Name=HJH9164929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001168019.1;locus_tag=O5D79_003498;product=YgdI/YgdR family lipoprotein;protein_id=HJH9164929.1;transl_table=11 DALFDJ020000019.1 tpg gene 86486 87595 . - . ID=gene-O5D79_003499;Name=O5D79_003499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003499 DALFDJ020000019.1 Protein Homology CDS 86486 87595 . - 0 ID=cds-HJH9164930.1;Parent=gene-O5D79_003499;Dbxref=NCBI_GP:HJH9164930.1;Name=HJH9164930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448089.1;locus_tag=O5D79_003499;product=hypothetical protein;protein_id=HJH9164930.1;transl_table=11 DALFDJ020000019.1 tpg gene 87986 88843 . - . ID=gene-O5D79_003500;Name=O5D79_003500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003500 DALFDJ020000019.1 Protein Homology CDS 87986 88843 . - 0 ID=cds-HJH9164931.1;Parent=gene-O5D79_003500;Dbxref=NCBI_GP:HJH9164931.1;Name=HJH9164931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460629.1;locus_tag=O5D79_003500;product=GyrI-like domain-containing protein;protein_id=HJH9164931.1;transl_table=11 DALFDJ020000019.1 tpg gene 89139 89984 . + . ID=gene-O5D79_003501;Name=zirU;gbkey=Gene;gene=zirU;gene_biotype=protein_coding;locus_tag=O5D79_003501 DALFDJ020000019.1 Protein Homology CDS 89139 89984 . + 0 ID=cds-HJH9164932.1;Parent=gene-O5D79_003501;Dbxref=NCBI_GP:HJH9164932.1;Name=HJH9164932.1;gbkey=CDS;gene=zirU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460628.1;locus_tag=O5D79_003501;product=two-partner-like secretion system exoprotein ZirU;protein_id=HJH9164932.1;transl_table=11 DALFDJ020000019.1 tpg gene 90059 92041 . + . ID=gene-O5D79_003502;Name=zirT;gbkey=Gene;gene=zirT;gene_biotype=protein_coding;locus_tag=O5D79_003502 DALFDJ020000019.1 Protein Homology CDS 90059 92041 . + 0 ID=cds-HJH9164933.1;Parent=gene-O5D79_003502;Dbxref=NCBI_GP:HJH9164933.1;Name=HJH9164933.1;gbkey=CDS;gene=zirT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460627.1;locus_tag=O5D79_003502;product=two-partner secretion translocator ZirT;protein_id=HJH9164933.1;transl_table=11 DALFDJ020000019.1 tpg gene 92062 92895 . + . ID=gene-O5D79_003503;Name=zirS;gbkey=Gene;gene=zirS;gene_biotype=protein_coding;locus_tag=O5D79_003503 DALFDJ020000019.1 Protein Homology CDS 92062 92895 . + 0 ID=cds-HJH9164934.1;Parent=gene-O5D79_003503;Dbxref=NCBI_GP:HJH9164934.1;Name=HJH9164934.1;gbkey=CDS;gene=zirS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460626.1;locus_tag=O5D79_003503;product=two-partner-like secretion system exoprotein ZirS;protein_id=HJH9164934.1;transl_table=11 DALFDJ020000019.1 tpg gene 92994 93551 . + . ID=gene-O5D79_003504;Name=O5D79_003504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003504 DALFDJ020000019.1 Protein Homology CDS 92994 93551 . + 0 ID=cds-HJH9164935.1;Parent=gene-O5D79_003504;Dbxref=NCBI_GP:HJH9164935.1;Name=HJH9164935.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460625.1;locus_tag=O5D79_003504;product=redoxin family protein;protein_id=HJH9164935.1;transl_table=11 DALFDJ020000019.1 tpg gene 93658 93996 . - . ID=gene-O5D79_003505;Name=O5D79_003505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003505 DALFDJ020000019.1 Protein Homology CDS 93658 93996 . - 0 ID=cds-HJH9164936.1;Parent=gene-O5D79_003505;Dbxref=NCBI_GP:HJH9164936.1;Name=HJH9164936.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051808.1;locus_tag=O5D79_003505;product=antibiotic biosynthesis monooxygenase family protein;protein_id=HJH9164936.1;transl_table=11 DALFDJ020000019.1 tpg gene 94024 94710 . - . ID=gene-O5D79_003506;Name=O5D79_003506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003506 DALFDJ020000019.1 Protein Homology CDS 94024 94710 . - 0 ID=cds-HJH9164937.1;Parent=gene-O5D79_003506;Dbxref=NCBI_GP:HJH9164937.1;Name=HJH9164937.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460624.1;locus_tag=O5D79_003506;product=B3/B4 domain-containing protein;protein_id=HJH9164937.1;transl_table=11 DALFDJ020000019.1 tpg gene 94754 95356 . + . ID=gene-O5D79_003507;Name=O5D79_003507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003507 DALFDJ020000019.1 Protein Homology CDS 94754 95356 . + 0 ID=cds-HJH9164938.1;Parent=gene-O5D79_003507;Dbxref=NCBI_GP:HJH9164938.1;Name=HJH9164938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460623.1;locus_tag=O5D79_003507;product=XRE family transcriptional regulator;protein_id=HJH9164938.1;transl_table=11 DALFDJ020000019.1 tpg gene 95438 96469 . - . ID=gene-O5D79_003508;Name=O5D79_003508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003508 DALFDJ020000019.1 Protein Homology CDS 95438 96469 . - 0 ID=cds-HJH9164939.1;Parent=gene-O5D79_003508;Dbxref=NCBI_GP:HJH9164939.1;Name=HJH9164939.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460622.1;locus_tag=O5D79_003508;product=mechanosensitive ion channel family protein;protein_id=HJH9164939.1;transl_table=11 DALFDJ020000019.1 tpg gene 96707 96961 . + . ID=gene-O5D79_003509;Name=O5D79_003509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003509 DALFDJ020000019.1 Protein Homology CDS 96707 96961 . + 0 ID=cds-HJH9164940.1;Parent=gene-O5D79_003509;Dbxref=NCBI_GP:HJH9164940.1;Name=HJH9164940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460621.1;locus_tag=O5D79_003509;product=DUF2534 family protein;protein_id=HJH9164940.1;transl_table=11 DALFDJ020000019.1 tpg gene 97016 97963 . - . ID=gene-O5D79_003510;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=O5D79_003510 DALFDJ020000019.1 Protein Homology CDS 97016 97963 . - 0 ID=cds-HJH9164941.1;Parent=gene-O5D79_003510;Dbxref=NCBI_GP:HJH9164941.1;Name=HJH9164941.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460620.1;locus_tag=O5D79_003510;product=universal stress protein UspE;protein_id=HJH9164941.1;transl_table=11 DALFDJ020000019.1 tpg gene 98114 98866 . - . ID=gene-O5D79_003511;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=O5D79_003511 DALFDJ020000019.1 Protein Homology CDS 98114 98866 . - 0 ID=cds-HJH9164942.1;Parent=gene-O5D79_003511;Dbxref=NCBI_GP:HJH9164942.1;Name=HJH9164942.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=O5D79_003511;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=HJH9164942.1;transl_table=11 DALFDJ020000019.1 tpg gene 99062 99577 . - . ID=gene-O5D79_003512;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=O5D79_003512 DALFDJ020000019.1 Protein Homology CDS 99062 99577 . - 0 ID=cds-HJH9164943.1;Parent=gene-O5D79_003512;Dbxref=NCBI_GP:HJH9164943.1;Name=HJH9164943.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460618.1;locus_tag=O5D79_003512;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=HJH9164943.1;transl_table=11 DALFDJ020000019.1 tpg gene 99835 100398 . + . ID=gene-O5D79_003513;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=O5D79_003513 DALFDJ020000019.1 Protein Homology CDS 99835 100398 . + 0 ID=cds-HJH9164944.1;Parent=gene-O5D79_003513;Dbxref=NCBI_GP:HJH9164944.1;Name=HJH9164944.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460617.1;locus_tag=O5D79_003513;product=DNA endonuclease SmrA;protein_id=HJH9164944.1;transl_table=11 DALFDJ020000019.1 tpg gene 100791 101945 . + . ID=gene-O5D79_003514;Name=O5D79_003514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003514 DALFDJ020000019.1 Protein Homology CDS 100791 101945 . + 0 ID=cds-HJH9164945.1;Parent=gene-O5D79_003514;Dbxref=NCBI_GP:HJH9164945.1;Name=HJH9164945.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460616.1;locus_tag=O5D79_003514;product=methyl-accepting chemotaxis protein;protein_id=HJH9164945.1;transl_table=11 DALFDJ020000019.1 tpg gene 102091 103074 . + . ID=gene-O5D79_003515;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=O5D79_003515 DALFDJ020000019.1 Protein Homology CDS 102091 103074 . + 0 ID=cds-HJH9164946.1;Parent=gene-O5D79_003515;Dbxref=NCBI_GP:HJH9164946.1;Name=HJH9164946.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=O5D79_003515;product=zinc transporter ZntB;protein_id=HJH9164946.1;transl_table=11 DALFDJ020000019.1 tpg gene 103350 103532 . + . ID=gene-O5D79_003516;Name=O5D79_003516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003516 DALFDJ020000019.1 Protein Homology CDS 103350 103532 . + 0 ID=cds-HJH9164947.1;Parent=gene-O5D79_003516;Dbxref=NCBI_GP:HJH9164947.1;Name=HJH9164947.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048180.1;locus_tag=O5D79_003516;product=hypothetical protein;protein_id=HJH9164947.1;transl_table=11 DALFDJ020000019.1 tpg gene 103561 104934 . + . ID=gene-O5D79_003517;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=O5D79_003517 DALFDJ020000019.1 Protein Homology CDS 103561 104934 . + 0 ID=cds-HJH9164948.1;Parent=gene-O5D79_003517;Dbxref=NCBI_GP:HJH9164948.1;Name=HJH9164948.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460614.1;locus_tag=O5D79_003517;product=ATP-dependent RNA helicase DbpA;protein_id=HJH9164948.1;transl_table=11 DALFDJ020000019.1 tpg gene 104978 105913 . - . ID=gene-O5D79_003518;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=O5D79_003518 DALFDJ020000019.1 Protein Homology CDS 104978 105913 . - 0 ID=cds-HJH9164949.1;Parent=gene-O5D79_003518;Dbxref=NCBI_GP:HJH9164949.1;Name=HJH9164949.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460613.1;locus_tag=O5D79_003518;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=HJH9164949.1;transl_table=11 DALFDJ020000019.1 tpg pseudogene 106019 106167 . - . ID=gene-O5D79_003519;Name=O5D79_003519;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003519;pseudo=true DALFDJ020000019.1 Protein Homology CDS 106019 106167 . - 0 ID=cds-O5D79_003519;Parent=gene-O5D79_003519;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309956.1;locus_tag=O5D79_003519;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 DALFDJ020000019.1 tpg gene 106123 106275 . + . ID=gene-O5D79_003520;Name=O5D79_003520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003520 DALFDJ020000019.1 Protein Homology CDS 106123 106275 . + 0 ID=cds-HJH9164950.1;Parent=gene-O5D79_003520;Dbxref=NCBI_GP:HJH9164950.1;Name=HJH9164950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465579.1;locus_tag=O5D79_003520;product=multidrug transporter;protein_id=HJH9164950.1;transl_table=11 DALFDJ020000019.1 tpg gene 106268 106606 . + . ID=gene-O5D79_003521;Name=O5D79_003521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003521 DALFDJ020000019.1 Protein Homology CDS 106268 106606 . + 0 ID=cds-HJH9164951.1;Parent=gene-O5D79_003521;Dbxref=NCBI_GP:HJH9164951.1;Name=HJH9164951.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460612.1;locus_tag=O5D79_003521;product=SMR family transporter;protein_id=HJH9164951.1;transl_table=11 DALFDJ020000019.1 tpg gene 106659 107093 . - . ID=gene-O5D79_003522;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=O5D79_003522 DALFDJ020000019.1 Protein Homology CDS 106659 107093 . - 0 ID=cds-HJH9164952.1;Parent=gene-O5D79_003522;Dbxref=NCBI_GP:HJH9164952.1;Name=HJH9164952.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460611.1;locus_tag=O5D79_003522;product=universal stress protein UspF;protein_id=HJH9164952.1;transl_table=11 ##sequence-region DALFDJ020000020.1 1 105779 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000020.1 tpg region 1 105779 . + . ID=DALFDJ020000020.1:1..105779;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000020.1 tpg gene 1 96 . - . ID=gene-O5D79_003523;Name=O5D79_003523;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003523;partial=true;start_range=.,1 DALFDJ020000020.1 Protein Homology CDS 1 96 . - 0 ID=cds-HJH9164953.1;Parent=gene-O5D79_003523;Dbxref=NCBI_GP:HJH9164953.1;Name=HJH9164953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460123.1;locus_tag=O5D79_003523;partial=true;product=YceK/YidQ family lipoprotein;protein_id=HJH9164953.1;start_range=.,1;transl_table=11 DALFDJ020000020.1 tpg gene 162 2705 . - . ID=gene-O5D79_003524;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=O5D79_003524 DALFDJ020000020.1 Protein Homology CDS 162 2705 . - 0 ID=cds-HJH9164954.1;Parent=gene-O5D79_003524;Dbxref=NCBI_GP:HJH9164954.1;Name=HJH9164954.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044602.1;locus_tag=O5D79_003524;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=HJH9164954.1;transl_table=11 DALFDJ020000020.1 tpg gene 2698 4233 . - . ID=gene-O5D79_003525;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=O5D79_003525 DALFDJ020000020.1 Protein Homology CDS 2698 4233 . - 0 ID=cds-HJH9164955.1;Parent=gene-O5D79_003525;Dbxref=NCBI_GP:HJH9164955.1;Name=HJH9164955.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460121.1;locus_tag=O5D79_003525;product=glucans biosynthesis protein MdoG;protein_id=HJH9164955.1;transl_table=11 DALFDJ020000020.1 tpg gene 4505 5659 . + . ID=gene-O5D79_003526;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=O5D79_003526 DALFDJ020000020.1 Protein Homology CDS 4505 5659 . + 0 ID=cds-HJH9164956.1;Parent=gene-O5D79_003526;Dbxref=NCBI_GP:HJH9164956.1;Name=HJH9164956.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460120.1;locus_tag=O5D79_003526;product=glucans biosynthesis protein MdoC;protein_id=HJH9164956.1;transl_table=11 DALFDJ020000020.1 tpg gene 5676 7163 . - . ID=gene-O5D79_003527;Name=O5D79_003527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003527 DALFDJ020000020.1 Protein Homology CDS 5676 7163 . - 0 ID=cds-HJH9164957.1;Parent=gene-O5D79_003527;Dbxref=NCBI_GP:HJH9164957.1;Name=HJH9164957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=O5D79_003527;product=phospholipase D family protein;protein_id=HJH9164957.1;transl_table=11 DALFDJ020000020.1 tpg gene 7099 7638 . - . ID=gene-O5D79_003528;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=O5D79_003528 DALFDJ020000020.1 Protein Homology CDS 7099 7638 . - 0 ID=cds-HJH9164958.1;Parent=gene-O5D79_003528;Dbxref=NCBI_GP:HJH9164958.1;Name=HJH9164958.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460118.1;locus_tag=O5D79_003528;product=O-acetyl-ADP-ribose deacetylase;protein_id=HJH9164958.1;transl_table=11 DALFDJ020000020.1 tpg gene 7724 8044 . - . ID=gene-O5D79_003529;Name=O5D79_003529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003529 DALFDJ020000020.1 Protein Homology CDS 7724 8044 . - 0 ID=cds-HJH9164959.1;Parent=gene-O5D79_003529;Dbxref=NCBI_GP:HJH9164959.1;Name=HJH9164959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460117.1;locus_tag=O5D79_003529;product=type 1 fimbrial protein;protein_id=HJH9164959.1;transl_table=11 DALFDJ020000020.1 tpg gene 8175 8501 . - . ID=gene-O5D79_003530;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=O5D79_003530 DALFDJ020000020.1 Protein Homology CDS 8175 8501 . - 0 ID=cds-HJH9164960.1;Parent=gene-O5D79_003530;Dbxref=NCBI_GP:HJH9164960.1;Name=HJH9164960.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460116.1;locus_tag=O5D79_003530;product=curli assembly chaperone CsgC;protein_id=HJH9164960.1;transl_table=11 DALFDJ020000020.1 tpg gene 8563 9018 . - . ID=gene-O5D79_003531;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=O5D79_003531 DALFDJ020000020.1 Protein Homology CDS 8563 9018 . - 0 ID=cds-HJH9164961.1;Parent=gene-O5D79_003531;Dbxref=NCBI_GP:HJH9164961.1;Name=HJH9164961.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460115.1;locus_tag=O5D79_003531;product=curli major subunit CsgA;protein_id=HJH9164961.1;transl_table=11 DALFDJ020000020.1 tpg gene 9060 9515 . - . ID=gene-O5D79_003532;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=O5D79_003532 DALFDJ020000020.1 Protein Homology CDS 9060 9515 . - 0 ID=cds-HJH9164962.1;Parent=gene-O5D79_003532;Dbxref=NCBI_GP:HJH9164962.1;Name=HJH9164962.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460114.1;locus_tag=O5D79_003532;product=curli minor subunit CsgB;protein_id=HJH9164962.1;transl_table=11 DALFDJ020000020.1 tpg gene 10270 10920 . + . ID=gene-O5D79_003533;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=O5D79_003533 DALFDJ020000020.1 Protein Homology CDS 10270 10920 . + 0 ID=cds-HJH9164963.1;Parent=gene-O5D79_003533;Dbxref=NCBI_GP:HJH9164963.1;Name=HJH9164963.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460113.1;locus_tag=O5D79_003533;product=biofilm master transcriptional regulator CsgD;protein_id=HJH9164963.1;transl_table=11 DALFDJ020000020.1 tpg gene 10925 11320 . + . ID=gene-O5D79_003534;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=O5D79_003534 DALFDJ020000020.1 Protein Homology CDS 10925 11320 . + 0 ID=cds-HJH9164964.1;Parent=gene-O5D79_003534;Dbxref=NCBI_GP:HJH9164964.1;Name=HJH9164964.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460112.1;locus_tag=O5D79_003534;product=curli production assembly/transport protein CsgE;protein_id=HJH9164964.1;transl_table=11 DALFDJ020000020.1 tpg gene 11347 11763 . + . ID=gene-O5D79_003535;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=O5D79_003535 DALFDJ020000020.1 Protein Homology CDS 11347 11763 . + 0 ID=cds-HJH9164965.1;Parent=gene-O5D79_003535;Dbxref=NCBI_GP:HJH9164965.1;Name=HJH9164965.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460111.1;locus_tag=O5D79_003535;product=curli production assembly/transport protein CsgF;protein_id=HJH9164965.1;transl_table=11 DALFDJ020000020.1 tpg gene 11790 12623 . + . ID=gene-O5D79_003536;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=O5D79_003536 DALFDJ020000020.1 Protein Homology CDS 11790 12623 . + 0 ID=cds-HJH9164966.1;Parent=gene-O5D79_003536;Dbxref=NCBI_GP:HJH9164966.1;Name=HJH9164966.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460110.1;locus_tag=O5D79_003536;product=curli production assembly/transport protein CsgG;protein_id=HJH9164966.1;transl_table=11 DALFDJ020000020.1 tpg gene 12662 13144 . - . ID=gene-O5D79_003537;Name=O5D79_003537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003537 DALFDJ020000020.1 Protein Homology CDS 12662 13144 . - 0 ID=cds-HJH9164967.1;Parent=gene-O5D79_003537;Dbxref=NCBI_GP:HJH9164967.1;Name=HJH9164967.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675581.1;locus_tag=O5D79_003537;product=DUF1097 domain-containing protein;protein_id=HJH9164967.1;transl_table=11 DALFDJ020000020.1 tpg gene 13245 13799 . - . ID=gene-O5D79_003538;Name=O5D79_003538;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003538 DALFDJ020000020.1 Protein Homology CDS 13245 13799 . - 0 ID=cds-HJH9164968.1;Parent=gene-O5D79_003538;Dbxref=NCBI_GP:HJH9164968.1;Name=HJH9164968.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460108.1;locus_tag=O5D79_003538;product=TorD/DmsD family molecular chaperone;protein_id=HJH9164968.1;transl_table=11 DALFDJ020000020.1 tpg gene 13823 14560 . - . ID=gene-O5D79_003539;Name=O5D79_003539;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003539 DALFDJ020000020.1 Protein Homology CDS 13823 14560 . - 0 ID=cds-HJH9164969.1;Parent=gene-O5D79_003539;Dbxref=NCBI_GP:HJH9164969.1;Name=HJH9164969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460107.1;locus_tag=O5D79_003539;product=phosphatase;protein_id=HJH9164969.1;transl_table=11 DALFDJ020000020.1 tpg gene 14645 15583 . - . ID=gene-O5D79_003540;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=O5D79_003540 DALFDJ020000020.1 Protein Homology CDS 14645 15583 . - 0 ID=cds-HJH9164970.1;Parent=gene-O5D79_003540;Dbxref=NCBI_GP:HJH9164970.1;Name=HJH9164970.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460106.1;locus_tag=O5D79_003540;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=HJH9164970.1;transl_table=11 DALFDJ020000020.1 tpg gene 15819 15906 . + . ID=gene-O5D79_003541;Name=O5D79_003541;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_003541 DALFDJ020000020.1 tRNAscan-SE tRNA 15819 15906 . + . ID=rna-O5D79_003541;Parent=gene-O5D79_003541;anticodon=(pos:15853..15855);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003541;product=tRNA-Ser DALFDJ020000020.1 tRNAscan-SE exon 15819 15906 . + . ID=exon-O5D79_003541-1;Parent=rna-O5D79_003541;anticodon=(pos:15853..15855);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003541;product=tRNA-Ser DALFDJ020000020.1 tpg gene 15955 16090 . + . ID=gene-O5D79_003542;Name=O5D79_003542;gbkey=Gene;gene_biotype=ncRNA;locus_tag=O5D79_003542 DALFDJ020000020.1 cmsearch ncRNA 15955 16090 . + . ID=rna-O5D79_003542;Parent=gene-O5D79_003542;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_003542;product=RtT sRNA DALFDJ020000020.1 cmsearch exon 15955 16090 . + . ID=exon-O5D79_003542-1;Parent=rna-O5D79_003542;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_003542;product=RtT sRNA DALFDJ020000020.1 tpg pseudogene 17037 17153 . + . ID=gene-O5D79_003543;Name=O5D79_003543;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003543;pseudo=true DALFDJ020000020.1 Protein Homology CDS 17037 17153 . + 0 ID=cds-O5D79_003543;Parent=gene-O5D79_003543;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611504.1;locus_tag=O5D79_003543;product=transposase;pseudo=true;transl_table=11 DALFDJ020000020.1 tpg gene 17379 18398 . - . ID=gene-O5D79_003544;Name=O5D79_003544;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003544 DALFDJ020000020.1 Protein Homology CDS 17379 18398 . - 0 ID=cds-HJH9164971.1;Parent=gene-O5D79_003544;Dbxref=NCBI_GP:HJH9164971.1;Name=HJH9164971.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032444102.1;locus_tag=O5D79_003544;product=IS110-like element ISSaen1 family transposase;protein_id=HJH9164971.1;transl_table=11 DALFDJ020000020.1 tpg pseudogene 18468 18599 . + . ID=gene-O5D79_003545;Name=O5D79_003545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003545;pseudo=true DALFDJ020000020.1 Protein Homology CDS 18468 18599 . + 0 ID=cds-O5D79_003545;Parent=gene-O5D79_003545;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611496.1;locus_tag=O5D79_003545;product=transposase;pseudo=true;transl_table=11 DALFDJ020000020.1 tpg gene 18860 19678 . - . ID=gene-O5D79_003546;Name=O5D79_003546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003546 DALFDJ020000020.1 Protein Homology CDS 18860 19678 . - 0 ID=cds-HJH9164972.1;Parent=gene-O5D79_003546;Dbxref=NCBI_GP:HJH9164972.1;Name=HJH9164972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176774.1;locus_tag=O5D79_003546;product=hypothetical protein;protein_id=HJH9164972.1;transl_table=11 DALFDJ020000020.1 tpg gene 20688 20777 . - . ID=gene-O5D79_003547;Name=O5D79_003547;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_003547 DALFDJ020000020.1 tRNAscan-SE tRNA 20688 20777 . - . ID=rna-O5D79_003547;Parent=gene-O5D79_003547;anticodon=(pos:complement(20741..20743));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003547;product=tRNA-Ser DALFDJ020000020.1 tRNAscan-SE exon 20688 20777 . - . ID=exon-O5D79_003547-1;Parent=rna-O5D79_003547;anticodon=(pos:complement(20741..20743));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003547;product=tRNA-Ser DALFDJ020000020.1 tpg gene 20866 21663 . + . ID=gene-O5D79_003548;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=O5D79_003548 DALFDJ020000020.1 Protein Homology CDS 20866 21663 . + 0 ID=cds-HJH9164973.1;Parent=gene-O5D79_003548;Dbxref=NCBI_GP:HJH9164973.1;Name=HJH9164973.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460951.1;locus_tag=O5D79_003548;product=DgsA anti-repressor MtfA;protein_id=HJH9164973.1;transl_table=11 DALFDJ020000020.1 tpg gene 21764 21839 . + . ID=gene-O5D79_003549;Name=O5D79_003549;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_003549 DALFDJ020000020.1 tRNAscan-SE tRNA 21764 21839 . + . ID=rna-O5D79_003549;Parent=gene-O5D79_003549;anticodon=(pos:21797..21799);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003549;product=tRNA-Asn DALFDJ020000020.1 tRNAscan-SE exon 21764 21839 . + . ID=exon-O5D79_003549-1;Parent=rna-O5D79_003549;anticodon=(pos:21797..21799);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003549;product=tRNA-Asn DALFDJ020000020.1 tpg pseudogene 22007 22312 . + . ID=gene-O5D79_003550;Name=O5D79_003550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003550;pseudo=true DALFDJ020000020.1 Protein Homology CDS 22007 22312 . + 0 ID=cds-O5D79_003550;Parent=gene-O5D79_003550;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751368.1;locus_tag=O5D79_003550;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000020.1 tpg gene 22734 22809 . + . ID=gene-O5D79_003551;Name=O5D79_003551;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_003551 DALFDJ020000020.1 tRNAscan-SE tRNA 22734 22809 . + . ID=rna-O5D79_003551;Parent=gene-O5D79_003551;anticodon=(pos:22767..22769);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003551;product=tRNA-Asn DALFDJ020000020.1 tRNAscan-SE exon 22734 22809 . + . ID=exon-O5D79_003551-1;Parent=rna-O5D79_003551;anticodon=(pos:22767..22769);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003551;product=tRNA-Asn DALFDJ020000020.1 tpg gene 22974 23255 . + . ID=gene-O5D79_003552;Name=O5D79_003552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003552 DALFDJ020000020.1 Protein Homology CDS 22974 23255 . + 0 ID=cds-HJH9164974.1;Parent=gene-O5D79_003552;Dbxref=NCBI_GP:HJH9164974.1;Name=HJH9164974.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835997.1;locus_tag=O5D79_003552;product=Arm DNA-binding domain-containing protein;protein_id=HJH9164974.1;transl_table=11 DALFDJ020000020.1 tpg gene 23573 23914 . - . ID=gene-O5D79_003553;Name=O5D79_003553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003553 DALFDJ020000020.1 Protein Homology CDS 23573 23914 . - 0 ID=cds-HJH9164975.1;Parent=gene-O5D79_003553;Dbxref=NCBI_GP:HJH9164975.1;Name=HJH9164975.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000967787.1;locus_tag=O5D79_003553;product=winged helix-turn-helix transcriptional regulator;protein_id=HJH9164975.1;transl_table=11 DALFDJ020000020.1 tpg gene 24029 24586 . + . ID=gene-O5D79_003554;Name=O5D79_003554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003554 DALFDJ020000020.1 Protein Homology CDS 24029 24586 . + 0 ID=cds-HJH9164976.1;Parent=gene-O5D79_003554;Dbxref=NCBI_GP:HJH9164976.1;Name=HJH9164976.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000751883.1;locus_tag=O5D79_003554;product=NAD(P)H-dependent oxidoreductase;protein_id=HJH9164976.1;transl_table=11 DALFDJ020000020.1 tpg pseudogene 25152 25250 . + . ID=gene-O5D79_003555;Name=O5D79_003555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003555;pseudo=true DALFDJ020000020.1 Protein Homology CDS 25152 25250 . + 0 ID=cds-O5D79_003555;Parent=gene-O5D79_003555;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000059623.1;locus_tag=O5D79_003555;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000020.1 tpg gene 25493 26947 . - . ID=gene-O5D79_003556;Name=O5D79_003556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003556 DALFDJ020000020.1 Protein Homology CDS 25493 26947 . - 0 ID=cds-HJH9164977.1;Parent=gene-O5D79_003556;Dbxref=NCBI_GP:HJH9164977.1;Name=HJH9164977.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460956.1;locus_tag=O5D79_003556;product=AMP nucleosidase;protein_id=HJH9164977.1;transl_table=11 DALFDJ020000020.1 tpg pseudogene 26993 27154 . + . ID=gene-O5D79_003557;Name=O5D79_003557;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003557;pseudo=true DALFDJ020000020.1 Protein Homology CDS 26993 27154 . + 0 ID=cds-O5D79_003557;Parent=gene-O5D79_003557;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448416.1;locus_tag=O5D79_003557;product=cytoplasmic protein;pseudo=true;transl_table=11 DALFDJ020000020.1 tpg gene 27143 27469 . - . ID=gene-O5D79_003558;Name=O5D79_003558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003558 DALFDJ020000020.1 Protein Homology CDS 27143 27469 . - 0 ID=cds-HJH9164978.1;Parent=gene-O5D79_003558;Dbxref=NCBI_GP:HJH9164978.1;Name=HJH9164978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460958.1;locus_tag=O5D79_003558;product=DUF1493 family protein;protein_id=HJH9164978.1;transl_table=11 DALFDJ020000020.1 tpg gene 27463 27927 . - . ID=gene-O5D79_003559;Name=O5D79_003559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003559 DALFDJ020000020.1 Protein Homology CDS 27463 27927 . - 0 ID=cds-HJH9164979.1;Parent=gene-O5D79_003559;Dbxref=NCBI_GP:HJH9164979.1;Name=HJH9164979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211098.1;locus_tag=O5D79_003559;product=STM2901 family protein;protein_id=HJH9164979.1;transl_table=11 DALFDJ020000020.1 tpg gene 28348 28423 . - . ID=gene-O5D79_003560;Name=O5D79_003560;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_003560 DALFDJ020000020.1 tRNAscan-SE tRNA 28348 28423 . - . ID=rna-O5D79_003560;Parent=gene-O5D79_003560;anticodon=(pos:complement(28388..28390));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003560;product=tRNA-Asn DALFDJ020000020.1 tRNAscan-SE exon 28348 28423 . - . ID=exon-O5D79_003560-1;Parent=rna-O5D79_003560;anticodon=(pos:complement(28388..28390));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003560;product=tRNA-Asn DALFDJ020000020.1 tpg gene 28564 30021 . - . ID=gene-O5D79_003561;Name=O5D79_003561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003561 DALFDJ020000020.1 Protein Homology CDS 28564 30021 . - 0 ID=cds-HJH9164980.1;Parent=gene-O5D79_003561;Dbxref=NCBI_GP:HJH9164980.1;Name=HJH9164980.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460959.1;locus_tag=O5D79_003561;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=HJH9164980.1;transl_table=11 DALFDJ020000020.1 tpg gene 30181 30256 . + . ID=gene-O5D79_003562;Name=O5D79_003562;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_003562 DALFDJ020000020.1 tRNAscan-SE tRNA 30181 30256 . + . ID=rna-O5D79_003562;Parent=gene-O5D79_003562;anticodon=(pos:30214..30216);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003562;product=tRNA-Asn DALFDJ020000020.1 tRNAscan-SE exon 30181 30256 . + . ID=exon-O5D79_003562-1;Parent=rna-O5D79_003562;anticodon=(pos:30214..30216);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003562;product=tRNA-Asn DALFDJ020000020.1 tpg gene 30482 31411 . - . ID=gene-O5D79_003563;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=O5D79_003563 DALFDJ020000020.1 Protein Homology CDS 30482 31411 . - 0 ID=cds-HJH9164981.1;Parent=gene-O5D79_003563;Dbxref=NCBI_GP:HJH9164981.1;Name=HJH9164981.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460960.1;locus_tag=O5D79_003563;product=L%2CD-transpeptidase;protein_id=HJH9164981.1;transl_table=11 DALFDJ020000020.1 tpg gene 31489 32559 . - . ID=gene-O5D79_003564;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=O5D79_003564 DALFDJ020000020.1 Protein Homology CDS 31489 32559 . - 0 ID=cds-HJH9164982.1;Parent=gene-O5D79_003564;Dbxref=NCBI_GP:HJH9164982.1;Name=HJH9164982.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460961.1;locus_tag=O5D79_003564;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=HJH9164982.1;transl_table=11 DALFDJ020000020.1 tpg gene 32586 33329 . - . ID=gene-O5D79_003565;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=O5D79_003565 DALFDJ020000020.1 Protein Homology CDS 32586 33329 . - 0 ID=cds-HJH9164983.1;Parent=gene-O5D79_003565;Dbxref=NCBI_GP:HJH9164983.1;Name=HJH9164983.1;Ontology_term=GO:0009236,GO:0008818,GO:0051073;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA,adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460962.1;locus_tag=O5D79_003565;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=HJH9164983.1;transl_table=11 DALFDJ020000020.1 tpg gene 33326 33871 . - . ID=gene-O5D79_003566;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=O5D79_003566 DALFDJ020000020.1 Protein Homology CDS 33326 33871 . - 0 ID=cds-HJH9164984.1;Parent=gene-O5D79_003566;Dbxref=NCBI_GP:HJH9164984.1;Name=HJH9164984.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460963.1;locus_tag=O5D79_003566;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=HJH9164984.1;transl_table=11 DALFDJ020000020.1 tpg gene 33868 35388 . - . ID=gene-O5D79_003567;Name=O5D79_003567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003567 DALFDJ020000020.1 Protein Homology CDS 33868 35388 . - 0 ID=cds-HJH9164985.1;Parent=gene-O5D79_003567;Dbxref=NCBI_GP:HJH9164985.1;Name=HJH9164985.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460964.1;locus_tag=O5D79_003567;product=cobyric acid synthase;protein_id=HJH9164985.1;transl_table=11 DALFDJ020000020.1 tpg gene 35385 36200 . - . ID=gene-O5D79_003568;Name=O5D79_003568;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003568 DALFDJ020000020.1 Protein Homology CDS 35385 36200 . - 0 ID=cds-HJH9164986.1;Parent=gene-O5D79_003568;Dbxref=NCBI_GP:HJH9164986.1;Name=HJH9164986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460965.1;locus_tag=O5D79_003568;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=HJH9164986.1;transl_table=11 DALFDJ020000020.1 tpg gene 36209 36886 . - . ID=gene-O5D79_003569;Name=O5D79_003569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003569 DALFDJ020000020.1 Protein Homology CDS 36209 36886 . - 0 ID=cds-HJH9164987.1;Parent=gene-O5D79_003569;Dbxref=NCBI_GP:HJH9164987.1;Name=HJH9164987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460966.1;locus_tag=O5D79_003569;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=HJH9164987.1;transl_table=11 DALFDJ020000020.1 tpg gene 36873 37154 . - . ID=gene-O5D79_003570;Name=O5D79_003570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003570 DALFDJ020000020.1 Protein Homology CDS 36873 37154 . - 0 ID=cds-HJH9164988.1;Parent=gene-O5D79_003570;Dbxref=NCBI_GP:HJH9164988.1;Name=HJH9164988.1;Ontology_term=GO:0006824,GO:0009236,GO:0015087,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460967.1;locus_tag=O5D79_003570;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=HJH9164988.1;transl_table=11 DALFDJ020000020.1 tpg gene 37156 37893 . - . ID=gene-O5D79_003571;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=O5D79_003571 DALFDJ020000020.1 Protein Homology CDS 37156 37893 . - 0 ID=cds-HJH9164989.1;Parent=gene-O5D79_003571;Dbxref=NCBI_GP:HJH9164989.1;Name=HJH9164989.1;Ontology_term=GO:0006824,GO:0009236,GO:0016020,GO:0043190;gbkey=CDS;gene=cbiM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460968.3;locus_tag=O5D79_003571;product=cobalt ECF transporter S component CbiM;protein_id=HJH9164989.1;transl_table=11 DALFDJ020000020.1 tpg gene 37890 38603 . - . ID=gene-O5D79_003572;Name=O5D79_003572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003572 DALFDJ020000020.1 Protein Homology CDS 37890 38603 . - 0 ID=cds-HJH9164990.1;Parent=gene-O5D79_003572;Dbxref=NCBI_GP:HJH9164990.1;Name=HJH9164990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460969.1;locus_tag=O5D79_003572;product=cobalt-factor II C(20)-methyltransferase;protein_id=HJH9164990.1;transl_table=11 DALFDJ020000020.1 tpg gene 38600 39394 . - . ID=gene-O5D79_003573;Name=cbiK;gbkey=Gene;gene=cbiK;gene_biotype=protein_coding;locus_tag=O5D79_003573 DALFDJ020000020.1 Protein Homology CDS 38600 39394 . - 0 ID=cds-HJH9164991.1;Parent=gene-O5D79_003573;Dbxref=NCBI_GP:HJH9164991.1;Name=HJH9164991.1;Ontology_term=GO:0006779,GO:0016852,GO:0046906;gbkey=CDS;gene=cbiK;go_function=sirohydrochlorin cobaltochelatase activity|0016852||IEA,tetrapyrrole binding|0046906||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460970.1;locus_tag=O5D79_003573;product=sirohydrochlorin cobaltochelatase;protein_id=HJH9164991.1;transl_table=11 DALFDJ020000020.1 tpg gene 39397 40188 . - . ID=gene-O5D79_003574;Name=O5D79_003574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003574 DALFDJ020000020.1 Protein Homology CDS 39397 40188 . - 0 ID=cds-HJH9164992.1;Parent=gene-O5D79_003574;Dbxref=NCBI_GP:HJH9164992.1;Name=HJH9164992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460971.1;locus_tag=O5D79_003574;product=cobalt-precorrin-6A reductase;protein_id=HJH9164992.1;transl_table=11 DALFDJ020000020.1 tpg gene 40185 40910 . - . ID=gene-O5D79_003575;Name=O5D79_003575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003575 DALFDJ020000020.1 Protein Homology CDS 40185 40910 . - 0 ID=cds-HJH9164993.1;Parent=gene-O5D79_003575;Dbxref=NCBI_GP:HJH9164993.1;Name=HJH9164993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460972.1;locus_tag=O5D79_003575;product=precorrin-3B C(17)-methyltransferase;protein_id=HJH9164993.1;transl_table=11 DALFDJ020000020.1 tpg gene 40910 41965 . - . ID=gene-O5D79_003576;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=O5D79_003576 DALFDJ020000020.1 Protein Homology CDS 40910 41965 . - 0 ID=cds-HJH9164994.1;Parent=gene-O5D79_003576;Dbxref=NCBI_GP:HJH9164994.1;Name=HJH9164994.1;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460973.1;locus_tag=O5D79_003576;product=cobalt-precorrin 5A hydrolase;protein_id=HJH9164994.1;transl_table=11 DALFDJ020000020.1 tpg gene 41946 42719 . - . ID=gene-O5D79_003577;Name=O5D79_003577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003577 DALFDJ020000020.1 Protein Homology CDS 41946 42719 . - 0 ID=cds-HJH9164995.1;Parent=gene-O5D79_003577;Dbxref=NCBI_GP:HJH9164995.1;Name=HJH9164995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460974.1;locus_tag=O5D79_003577;product=cobalt-precorrin-4 methyltransferase;protein_id=HJH9164995.1;transl_table=11 DALFDJ020000020.1 tpg gene 42703 43281 . - . ID=gene-O5D79_003578;Name=O5D79_003578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003578 DALFDJ020000020.1 Protein Homology CDS 42703 43281 . - 0 ID=cds-HJH9164996.1;Parent=gene-O5D79_003578;Dbxref=NCBI_GP:HJH9164996.1;Name=HJH9164996.1;Ontology_term=GO:0009236,GO:0008276;gbkey=CDS;go_function=protein methyltransferase activity|0008276||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460975.1;locus_tag=O5D79_003578;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=HJH9164996.1;transl_table=11 DALFDJ020000020.1 tpg gene 43271 43876 . - . ID=gene-O5D79_003579;Name=O5D79_003579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003579 DALFDJ020000020.1 Protein Homology CDS 43271 43876 . - 0 ID=cds-HJH9164997.1;Parent=gene-O5D79_003579;Dbxref=NCBI_GP:HJH9164997.1;Name=HJH9164997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460976.1;locus_tag=O5D79_003579;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=HJH9164997.1;transl_table=11 DALFDJ020000020.1 tpg gene 43870 45009 . - . ID=gene-O5D79_003580;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=O5D79_003580 DALFDJ020000020.1 Protein Homology CDS 43870 45009 . - 0 ID=cds-HJH9164998.1;Parent=gene-O5D79_003580;Dbxref=NCBI_GP:HJH9164998.1;Name=HJH9164998.1;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460977.1;locus_tag=O5D79_003580;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;protein_id=HJH9164998.1;transl_table=11 DALFDJ020000020.1 tpg gene 45009 45641 . - . ID=gene-O5D79_003581;Name=O5D79_003581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003581 DALFDJ020000020.1 Protein Homology CDS 45009 45641 . - 0 ID=cds-HJH9164999.1;Parent=gene-O5D79_003581;Dbxref=NCBI_GP:HJH9164999.1;Name=HJH9164999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460978.1;locus_tag=O5D79_003581;product=cobalt-precorrin-8 methylmutase;protein_id=HJH9164999.1;transl_table=11 DALFDJ020000020.1 tpg gene 45652 46611 . - . ID=gene-O5D79_003582;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=O5D79_003582 DALFDJ020000020.1 Protein Homology CDS 45652 46611 . - 0 ID=cds-HJH9165000.1;Parent=gene-O5D79_003582;Dbxref=NCBI_GP:HJH9165000.1;Name=HJH9165000.1;Ontology_term=GO:0009236,GO:0048472,GO:0016020;gbkey=CDS;gene=cbiB;go_component=membrane|0016020||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460979.1;locus_tag=O5D79_003582;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=HJH9165000.1;transl_table=11 DALFDJ020000020.1 tpg gene 46608 47987 . - . ID=gene-O5D79_003583;Name=O5D79_003583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003583 DALFDJ020000020.1 Protein Homology CDS 46608 47987 . - 0 ID=cds-HJH9165001.1;Parent=gene-O5D79_003583;Dbxref=NCBI_GP:HJH9165001.1;Name=HJH9165001.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460980.1;locus_tag=O5D79_003583;product=cobyrinate a%2Cc-diamide synthase;protein_id=HJH9165001.1;transl_table=11 DALFDJ020000020.1 cmsearch riboswitch 48085 48259 . - . ID=id-DALFDJ020000020.1:48085..48259;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch DALFDJ020000020.1 tpg gene 48585 49496 . - . ID=gene-O5D79_003584;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=O5D79_003584 DALFDJ020000020.1 Protein Homology CDS 48585 49496 . - 0 ID=cds-HJH9165002.1;Parent=gene-O5D79_003584;Dbxref=NCBI_GP:HJH9165002.1;Name=HJH9165002.1;Ontology_term=GO:0009236,GO:0051144,GO:0003700,GO:0043565;gbkey=CDS;gene=pocR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,propanediol catabolic process|0051144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460981.1;locus_tag=O5D79_003584;product=transcriptional regulator PocR;protein_id=HJH9165002.1;transl_table=11 DALFDJ020000020.1 tpg gene 49713 50507 . - . ID=gene-O5D79_003585;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=O5D79_003585 DALFDJ020000020.1 Protein Homology CDS 49713 50507 . - 0 ID=cds-HJH9165003.1;Parent=gene-O5D79_003585;Dbxref=NCBI_GP:HJH9165003.1;Name=HJH9165003.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460982.1;locus_tag=O5D79_003585;product=propanediol diffusion facilitator PduF;protein_id=HJH9165003.1;transl_table=11 DALFDJ020000020.1 tpg gene 51032 51316 . + . ID=gene-O5D79_003586;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=O5D79_003586 DALFDJ020000020.1 Protein Homology CDS 51032 51316 . + 0 ID=cds-HJH9165004.1;Parent=gene-O5D79_003586;Dbxref=NCBI_GP:HJH9165004.1;Name=HJH9165004.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460983.1;locus_tag=O5D79_003586;product=propanediol utilization microcompartment protein PduA;protein_id=HJH9165004.1;transl_table=11 DALFDJ020000020.1 tpg gene 51313 52125 . + . ID=gene-O5D79_003587;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=O5D79_003587 DALFDJ020000020.1 Protein Homology CDS 51313 52125 . + 0 ID=cds-HJH9165005.1;Parent=gene-O5D79_003587;Dbxref=NCBI_GP:HJH9165005.1;Name=HJH9165005.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=O5D79_003587;product=propanediol utilization microcompartment protein PduB;protein_id=HJH9165005.1;transl_table=11 DALFDJ020000020.1 tpg gene 52144 53808 . + . ID=gene-O5D79_003588;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=O5D79_003588 DALFDJ020000020.1 Protein Homology CDS 52144 53808 . + 0 ID=cds-HJH9165006.1;Parent=gene-O5D79_003588;Dbxref=NCBI_GP:HJH9165006.1;Name=HJH9165006.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460985.1;locus_tag=O5D79_003588;product=propanediol dehydratase large subunit PduC;protein_id=HJH9165006.1;transl_table=11 DALFDJ020000020.1 tpg gene 53819 54493 . + . ID=gene-O5D79_003589;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=O5D79_003589 DALFDJ020000020.1 Protein Homology CDS 53819 54493 . + 0 ID=cds-HJH9165007.1;Parent=gene-O5D79_003589;Dbxref=NCBI_GP:HJH9165007.1;Name=HJH9165007.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460986.1;locus_tag=O5D79_003589;product=propanediol dehydratase medium subunit PduD;protein_id=HJH9165007.1;transl_table=11 DALFDJ020000020.1 tpg gene 54508 55029 . + . ID=gene-O5D79_003590;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=O5D79_003590 DALFDJ020000020.1 Protein Homology CDS 54508 55029 . + 0 ID=cds-HJH9165008.1;Parent=gene-O5D79_003590;Dbxref=NCBI_GP:HJH9165008.1;Name=HJH9165008.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460987.1;locus_tag=O5D79_003590;product=propanediol dehydratase small subunit PduE;protein_id=HJH9165008.1;transl_table=11 DALFDJ020000020.1 tpg gene 55235 57067 . + . ID=gene-O5D79_003591;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=protein_coding;locus_tag=O5D79_003591 DALFDJ020000020.1 Protein Homology CDS 55235 57067 . + 0 ID=cds-HJH9165009.1;Parent=gene-O5D79_003591;Dbxref=NCBI_GP:HJH9165009.1;Name=HJH9165009.1;gbkey=CDS;gene=pduG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460988.1;locus_tag=O5D79_003591;product=propanediol dehydratase reactivase alpha subunit PduG;protein_id=HJH9165009.1;transl_table=11 DALFDJ020000020.1 tpg gene 57057 57407 . + . ID=gene-O5D79_003592;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;locus_tag=O5D79_003592 DALFDJ020000020.1 Protein Homology CDS 57057 57407 . + 0 ID=cds-HJH9165010.1;Parent=gene-O5D79_003592;Dbxref=NCBI_GP:HJH9165010.1;Name=HJH9165010.1;gbkey=CDS;gene=pduH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460989.1;locus_tag=O5D79_003592;product=propanediol dehydratase reactivase beta subunit PduH;protein_id=HJH9165010.1;transl_table=11 DALFDJ020000020.1 tpg gene 57426 57701 . + . ID=gene-O5D79_003593;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=O5D79_003593 DALFDJ020000020.1 Protein Homology CDS 57426 57701 . + 0 ID=cds-HJH9165011.1;Parent=gene-O5D79_003593;Dbxref=NCBI_GP:HJH9165011.1;Name=HJH9165011.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460990.1;locus_tag=O5D79_003593;product=propanediol utilization microcompartment protein PduJ;protein_id=HJH9165011.1;transl_table=11 DALFDJ020000020.1 tpg gene 57705 58187 . + . ID=gene-O5D79_003594;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=protein_coding;locus_tag=O5D79_003594 DALFDJ020000020.1 Protein Homology CDS 57705 58187 . + 0 ID=cds-HJH9165012.1;Parent=gene-O5D79_003594;Dbxref=NCBI_GP:HJH9165012.1;Name=HJH9165012.1;gbkey=CDS;gene=pduK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460991.3;locus_tag=O5D79_003594;product=propanediol utilization microcompartment protein PduK;protein_id=HJH9165012.1;transl_table=11 DALFDJ020000020.1 tpg gene 58187 58819 . + . ID=gene-O5D79_003595;Name=O5D79_003595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003595 DALFDJ020000020.1 Protein Homology CDS 58187 58819 . + 0 ID=cds-HJH9165013.1;Parent=gene-O5D79_003595;Dbxref=NCBI_GP:HJH9165013.1;Name=HJH9165013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460992.1;locus_tag=O5D79_003595;product=phosphate propanoyltransferase;protein_id=HJH9165013.1;transl_table=11 DALFDJ020000020.1 tpg gene 58816 59307 . + . ID=gene-O5D79_003596;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=O5D79_003596 DALFDJ020000020.1 Protein Homology CDS 58816 59307 . + 0 ID=cds-HJH9165014.1;Parent=gene-O5D79_003596;Dbxref=NCBI_GP:HJH9165014.1;Name=HJH9165014.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460993.1;locus_tag=O5D79_003596;product=propanediol utilization microcompartment protein PduM;protein_id=HJH9165014.1;transl_table=11 DALFDJ020000020.1 tpg gene 59311 59586 . + . ID=gene-O5D79_003597;Name=pduN;gbkey=Gene;gene=pduN;gene_biotype=protein_coding;locus_tag=O5D79_003597 DALFDJ020000020.1 Protein Homology CDS 59311 59586 . + 0 ID=cds-HJH9165015.1;Parent=gene-O5D79_003597;Dbxref=NCBI_GP:HJH9165015.1;Name=HJH9165015.1;gbkey=CDS;gene=pduN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=O5D79_003597;product=propanediol utilization microcompartment protein PduN;protein_id=HJH9165015.1;transl_table=11 DALFDJ020000020.1 tpg gene 59596 60606 . + . ID=gene-O5D79_003598;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=protein_coding;locus_tag=O5D79_003598 DALFDJ020000020.1 Protein Homology CDS 59596 60606 . + 0 ID=cds-HJH9165016.1;Parent=gene-O5D79_003598;Dbxref=NCBI_GP:HJH9165016.1;Name=HJH9165016.1;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460995.1;locus_tag=O5D79_003598;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;protein_id=HJH9165016.1;transl_table=11 DALFDJ020000020.1 tpg gene 60603 61997 . + . ID=gene-O5D79_003599;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=O5D79_003599 DALFDJ020000020.1 Protein Homology CDS 60603 61997 . + 0 ID=cds-HJH9165017.1;Parent=gene-O5D79_003599;Dbxref=NCBI_GP:HJH9165017.1;Name=HJH9165017.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460996.1;locus_tag=O5D79_003599;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=HJH9165017.1;transl_table=11 DALFDJ020000020.1 tpg gene 62009 63121 . + . ID=gene-O5D79_003600;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=O5D79_003600 DALFDJ020000020.1 Protein Homology CDS 62009 63121 . + 0 ID=cds-HJH9165018.1;Parent=gene-O5D79_003600;Dbxref=NCBI_GP:HJH9165018.1;Name=HJH9165018.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460997.1;locus_tag=O5D79_003600;product=1-propanol dehydrogenase PduQ;protein_id=HJH9165018.1;transl_table=11 DALFDJ020000020.1 tpg gene 63118 64473 . + . ID=gene-O5D79_003601;Name=pduS;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=O5D79_003601 DALFDJ020000020.1 Protein Homology CDS 63118 64473 . + 0 ID=cds-HJH9165019.1;Parent=gene-O5D79_003601;Dbxref=NCBI_GP:HJH9165019.1;Name=HJH9165019.1;gbkey=CDS;gene=pduS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460998.1;locus_tag=O5D79_003601;product=cobalamin reductase PduS;protein_id=HJH9165019.1;transl_table=11 DALFDJ020000020.1 tpg gene 64476 65030 . + . ID=gene-O5D79_003602;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=O5D79_003602 DALFDJ020000020.1 Protein Homology CDS 64476 65030 . + 0 ID=cds-HJH9165020.1;Parent=gene-O5D79_003602;Dbxref=NCBI_GP:HJH9165020.1;Name=HJH9165020.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460999.1;locus_tag=O5D79_003602;product=propanediol utilization microcompartment protein PduT;protein_id=HJH9165020.1;transl_table=11 DALFDJ020000020.1 tpg gene 65030 65380 . + . ID=gene-O5D79_003603;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=O5D79_003603 DALFDJ020000020.1 Protein Homology CDS 65030 65380 . + 0 ID=cds-HJH9165021.1;Parent=gene-O5D79_003603;Dbxref=NCBI_GP:HJH9165021.1;Name=HJH9165021.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461000.1;locus_tag=O5D79_003603;product=propanediol utilization microcompartment protein PduU;protein_id=HJH9165021.1;transl_table=11 DALFDJ020000020.1 tpg gene 65385 65837 . + . ID=gene-O5D79_003604;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=O5D79_003604 DALFDJ020000020.1 Protein Homology CDS 65385 65837 . + 0 ID=cds-HJH9165022.1;Parent=gene-O5D79_003604;Dbxref=NCBI_GP:HJH9165022.1;Name=HJH9165022.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461001.1;locus_tag=O5D79_003604;product=propanediol utilization protein PduV;protein_id=HJH9165022.1;transl_table=11 DALFDJ020000020.1 tpg gene 65822 67036 . + . ID=gene-O5D79_003605;Name=pduW;gbkey=Gene;gene=pduW;gene_biotype=protein_coding;locus_tag=O5D79_003605 DALFDJ020000020.1 Protein Homology CDS 65822 67036 . + 0 ID=cds-HJH9165023.1;Parent=gene-O5D79_003605;Dbxref=NCBI_GP:HJH9165023.1;Name=HJH9165023.1;gbkey=CDS;gene=pduW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461002.1;locus_tag=O5D79_003605;product=propanediol utilization propionate kinase PduW;protein_id=HJH9165023.1;transl_table=11 DALFDJ020000020.1 tpg gene 67130 67996 . + . ID=gene-O5D79_003606;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=O5D79_003606 DALFDJ020000020.1 Protein Homology CDS 67130 67996 . + 0 ID=cds-HJH9165024.1;Parent=gene-O5D79_003606;Dbxref=NCBI_GP:HJH9165024.1;Name=HJH9165024.1;gbkey=CDS;gene=pduX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=O5D79_003606;product=L-threonine kinase PduX;protein_id=HJH9165024.1;transl_table=11 DALFDJ020000020.1 tpg gene 68030 68365 . - . ID=gene-O5D79_003607;Name=O5D79_003607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003607 DALFDJ020000020.1 Protein Homology CDS 68030 68365 . - 0 ID=cds-HJH9165025.1;Parent=gene-O5D79_003607;Dbxref=NCBI_GP:HJH9165025.1;Name=HJH9165025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461004.1;locus_tag=O5D79_003607;product=DUF496 family protein;protein_id=HJH9165025.1;transl_table=11 DALFDJ020000020.1 tpg gene 68610 69668 . - . ID=gene-O5D79_003608;Name=O5D79_003608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003608 DALFDJ020000020.1 Protein Homology CDS 68610 69668 . - 0 ID=cds-HJH9165026.1;Parent=gene-O5D79_003608;Dbxref=NCBI_GP:HJH9165026.1;Name=HJH9165026.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461005.1;locus_tag=O5D79_003608;product=FUSC family protein;protein_id=HJH9165026.1;transl_table=11 DALFDJ020000020.1 tpg gene 69787 70254 . - . ID=gene-O5D79_003609;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=O5D79_003609 DALFDJ020000020.1 Protein Homology CDS 69787 70254 . - 0 ID=cds-HJH9165027.1;Parent=gene-O5D79_003609;Dbxref=NCBI_GP:HJH9165027.1;Name=HJH9165027.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461006.1;locus_tag=O5D79_003609;product=DNA gyrase inhibitor SbmC;protein_id=HJH9165027.1;transl_table=11 DALFDJ020000020.1 tpg gene 70405 71577 . - . ID=gene-O5D79_003610;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=O5D79_003610 DALFDJ020000020.1 Protein Homology CDS 70405 71577 . - 0 ID=cds-HJH9165028.1;Parent=gene-O5D79_003610;Dbxref=NCBI_GP:HJH9165028.1;Name=HJH9165028.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=O5D79_003610;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=HJH9165028.1;transl_table=11 DALFDJ020000020.1 tpg gene 71701 72465 . - . ID=gene-O5D79_003611;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=O5D79_003611 DALFDJ020000020.1 Protein Homology CDS 71701 72465 . - 0 ID=cds-HJH9165029.1;Parent=gene-O5D79_003611;Dbxref=NCBI_GP:HJH9165029.1;Name=HJH9165029.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461008.1;locus_tag=O5D79_003611;product=thiosulfate reductase cytochrome B subunit;protein_id=HJH9165029.1;transl_table=11 DALFDJ020000020.1 tpg gene 72462 73040 . - . ID=gene-O5D79_003612;Name=phsB;gbkey=Gene;gene=phsB;gene_biotype=protein_coding;locus_tag=O5D79_003612 DALFDJ020000020.1 Protein Homology CDS 72462 73040 . - 0 ID=cds-HJH9165030.1;Parent=gene-O5D79_003612;Dbxref=NCBI_GP:HJH9165030.1;Name=HJH9165030.1;gbkey=CDS;gene=phsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461009.1;locus_tag=O5D79_003612;product=thiosulfate reductase electron transport protein PhsB;protein_id=HJH9165030.1;transl_table=11 DALFDJ020000020.1 tpg gene 73055 75331 . - . ID=gene-O5D79_003613;Name=phsA;gbkey=Gene;gene=phsA;gene_biotype=protein_coding;locus_tag=O5D79_003613 DALFDJ020000020.1 Protein Homology CDS 73055 75331 . - 0 ID=cds-HJH9165031.1;Parent=gene-O5D79_003613;Dbxref=NCBI_GP:HJH9165031.1;Name=HJH9165031.1;Ontology_term=GO:0016491,GO:0043546,GO:0051539;gbkey=CDS;gene=phsA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461010.1;locus_tag=O5D79_003613;product=thiosulfate reductase PhsA;protein_id=HJH9165031.1;transl_table=11 DALFDJ020000020.1 tpg pseudogene 75591 75683 . - . ID=gene-O5D79_003614;Name=O5D79_003614;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003614;pseudo=true DALFDJ020000020.1 Protein Homology CDS 75591 75683 . - 0 ID=cds-O5D79_003614;Parent=gene-O5D79_003614;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459907.1;locus_tag=O5D79_003614;product=heavy metal-binding domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000020.1 tpg gene 75950 78298 . + . ID=gene-O5D79_003615;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=O5D79_003615 DALFDJ020000020.1 Protein Homology CDS 75950 78298 . + 0 ID=cds-HJH9165032.1;Parent=gene-O5D79_003615;Dbxref=NCBI_GP:HJH9165032.1;Name=HJH9165032.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461011.1;locus_tag=O5D79_003615;product=SPI-1 type III secretion system effector HECT-type E3 ubiquitin transferase SopA;protein_id=HJH9165032.1;transl_table=11 DALFDJ020000020.1 tpg pseudogene 78428 78505 . - . ID=gene-O5D79_003616;Name=O5D79_003616;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003616;pseudo=true DALFDJ020000020.1 Protein Homology CDS 78428 78505 . - 0 ID=cds-O5D79_003616;Parent=gene-O5D79_003616;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226536.1;locus_tag=O5D79_003616;product=hypothetical protein;pseudo=true;transl_table=11 DALFDJ020000020.1 tpg gene 78665 80095 . + . ID=gene-O5D79_003617;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=O5D79_003617 DALFDJ020000020.1 Protein Homology CDS 78665 80095 . + 0 ID=cds-HJH9165033.1;Parent=gene-O5D79_003617;Dbxref=NCBI_GP:HJH9165033.1;Name=HJH9165033.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461012.1;locus_tag=O5D79_003617;product=exodeoxyribonuclease I;protein_id=HJH9165033.1;transl_table=11 DALFDJ020000020.1 tpg gene 80231 81589 . - . ID=gene-O5D79_003618;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=O5D79_003618 DALFDJ020000020.1 Protein Homology CDS 80231 81589 . - 0 ID=cds-HJH9165034.1;Parent=gene-O5D79_003618;Dbxref=NCBI_GP:HJH9165034.1;Name=HJH9165034.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=O5D79_003618;product=putrescine/proton symporter PlaP;protein_id=HJH9165034.1;transl_table=11 DALFDJ020000020.1 tpg gene 81579 81641 . - . ID=gene-O5D79_003619;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=O5D79_003619 DALFDJ020000020.1 Protein Homology CDS 81579 81641 . - 0 ID=cds-HJH9165035.1;Parent=gene-O5D79_003619;Dbxref=NCBI_GP:HJH9165035.1;Name=HJH9165035.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=O5D79_003619;product=membrane protein YoeI;protein_id=HJH9165035.1;transl_table=11 DALFDJ020000020.1 tpg gene 81875 82789 . - . ID=gene-O5D79_003620;Name=O5D79_003620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003620 DALFDJ020000020.1 Protein Homology CDS 81875 82789 . - 0 ID=cds-HJH9165036.1;Parent=gene-O5D79_003620;Dbxref=NCBI_GP:HJH9165036.1;Name=HJH9165036.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461014.1;locus_tag=O5D79_003620;product=LysR family transcriptional regulator;protein_id=HJH9165036.1;transl_table=11 DALFDJ020000020.1 tpg gene 82835 83659 . - . ID=gene-O5D79_003621;Name=O5D79_003621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003621 DALFDJ020000020.1 Protein Homology CDS 82835 83659 . - 0 ID=cds-HJH9165037.1;Parent=gene-O5D79_003621;Dbxref=NCBI_GP:HJH9165037.1;Name=HJH9165037.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461015.1;locus_tag=O5D79_003621;product=SDR family oxidoreductase;protein_id=HJH9165037.1;transl_table=11 DALFDJ020000020.1 tpg gene 83821 83871 . + . ID=gene-O5D79_003622;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=O5D79_003622 DALFDJ020000020.1 Protein Homology CDS 83821 83871 . + 0 ID=cds-HJH9165038.1;Parent=gene-O5D79_003622;Dbxref=NCBI_GP:HJH9165038.1;Name=HJH9165038.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=O5D79_003622;product=his operon leader peptide;protein_id=HJH9165038.1;transl_table=11 DALFDJ020000020.1 cmsearch sequence_feature 83847 83970 . + . ID=id-DALFDJ020000020.1:83847..83970;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 DALFDJ020000020.1 tpg gene 84017 84916 . + . ID=gene-O5D79_003623;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=O5D79_003623 DALFDJ020000020.1 Protein Homology CDS 84017 84916 . + 0 ID=cds-HJH9165039.1;Parent=gene-O5D79_003623;Dbxref=NCBI_GP:HJH9165039.1;Name=HJH9165039.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=O5D79_003623;product=ATP phosphoribosyltransferase;protein_id=HJH9165039.1;transl_table=11 DALFDJ020000020.1 tpg gene 85019 86323 . + . ID=gene-O5D79_003624;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=O5D79_003624 DALFDJ020000020.1 Protein Homology CDS 85019 86323 . + 0 ID=cds-HJH9165040.1;Parent=gene-O5D79_003624;Dbxref=NCBI_GP:HJH9165040.1;Name=HJH9165040.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=O5D79_003624;product=histidinol dehydrogenase;protein_id=HJH9165040.1;transl_table=11 DALFDJ020000020.1 tpg gene 86320 87399 . + . ID=gene-O5D79_003625;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=O5D79_003625 DALFDJ020000020.1 Protein Homology CDS 86320 87399 . + 0 ID=cds-HJH9165041.1;Parent=gene-O5D79_003625;Dbxref=NCBI_GP:HJH9165041.1;Name=HJH9165041.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461018.1;locus_tag=O5D79_003625;product=histidinol-phosphate transaminase;protein_id=HJH9165041.1;transl_table=11 DALFDJ020000020.1 tpg gene 87396 88463 . + . ID=gene-O5D79_003626;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=O5D79_003626 DALFDJ020000020.1 Protein Homology CDS 87396 88463 . + 0 ID=cds-HJH9165042.1;Parent=gene-O5D79_003626;Dbxref=NCBI_GP:HJH9165042.1;Name=HJH9165042.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461019.1;locus_tag=O5D79_003626;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=HJH9165042.1;transl_table=11 DALFDJ020000020.1 tpg gene 88463 89053 . + . ID=gene-O5D79_003627;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=O5D79_003627 DALFDJ020000020.1 Protein Homology CDS 88463 89053 . + 0 ID=cds-HJH9165043.1;Parent=gene-O5D79_003627;Dbxref=NCBI_GP:HJH9165043.1;Name=HJH9165043.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=O5D79_003627;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=HJH9165043.1;transl_table=11 DALFDJ020000020.1 tpg gene 89053 89790 . + . ID=gene-O5D79_003628;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=O5D79_003628 DALFDJ020000020.1 Protein Homology CDS 89053 89790 . + 0 ID=cds-HJH9165044.1;Parent=gene-O5D79_003628;Dbxref=NCBI_GP:HJH9165044.1;Name=HJH9165044.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461021.1;locus_tag=O5D79_003628;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=HJH9165044.1;transl_table=11 DALFDJ020000020.1 tpg gene 89772 90548 . + . ID=gene-O5D79_003629;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=O5D79_003629 DALFDJ020000020.1 Protein Homology CDS 89772 90548 . + 0 ID=cds-HJH9165045.1;Parent=gene-O5D79_003629;Dbxref=NCBI_GP:HJH9165045.1;Name=HJH9165045.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461022.1;locus_tag=O5D79_003629;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=HJH9165045.1;transl_table=11 DALFDJ020000020.1 tpg gene 90542 91153 . + . ID=gene-O5D79_003630;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=O5D79_003630 DALFDJ020000020.1 Protein Homology CDS 90542 91153 . + 0 ID=cds-HJH9165046.1;Parent=gene-O5D79_003630;Dbxref=NCBI_GP:HJH9165046.1;Name=HJH9165046.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461023.1;locus_tag=O5D79_003630;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=HJH9165046.1;transl_table=11 DALFDJ020000020.1 tpg gene 91234 92217 . - . ID=gene-O5D79_003631;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=O5D79_003631 DALFDJ020000020.1 Protein Homology CDS 91234 92217 . - 0 ID=cds-HJH9165047.1;Parent=gene-O5D79_003631;Dbxref=NCBI_GP:HJH9165047.1;Name=HJH9165047.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461024.1;locus_tag=O5D79_003631;product=LPS O-antigen chain length determinant protein WzzB;protein_id=HJH9165047.1;transl_table=11 DALFDJ020000020.1 tpg gene 92360 93526 . - . ID=gene-O5D79_003632;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=O5D79_003632 DALFDJ020000020.1 Protein Homology CDS 92360 93526 . - 0 ID=cds-HJH9165048.1;Parent=gene-O5D79_003632;Dbxref=NCBI_GP:HJH9165048.1;Name=HJH9165048.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461025.1;locus_tag=O5D79_003632;product=UDP-glucose 6-dehydrogenase;protein_id=HJH9165048.1;transl_table=11 DALFDJ020000020.1 tpg gene 93762 95168 . - . ID=gene-O5D79_003633;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=O5D79_003633 DALFDJ020000020.1 Protein Homology CDS 93762 95168 . - 0 ID=cds-HJH9165049.1;Parent=gene-O5D79_003633;Dbxref=NCBI_GP:HJH9165049.1;Name=HJH9165049.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461026.1;locus_tag=O5D79_003633;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=HJH9165049.1;transl_table=11 DALFDJ020000020.1 tpg gene 95413 96525 . - . ID=gene-O5D79_003634;Name=O5D79_003634;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003634 DALFDJ020000020.1 Protein Homology CDS 95413 96525 . - 0 ID=cds-HJH9165050.1;Parent=gene-O5D79_003634;Dbxref=NCBI_GP:HJH9165050.1;Name=HJH9165050.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000136911.1;locus_tag=O5D79_003634;product=acyltransferase family protein;protein_id=HJH9165050.1;transl_table=11 DALFDJ020000020.1 tpg gene 96700 98130 . - . ID=gene-O5D79_003635;Name=O5D79_003635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003635 DALFDJ020000020.1 Protein Homology CDS 96700 98130 . - 0 ID=cds-HJH9165051.1;Parent=gene-O5D79_003635;Dbxref=NCBI_GP:HJH9165051.1;Name=HJH9165051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461027.1;locus_tag=O5D79_003635;product=undecaprenyl-phosphate galactose phosphotransferase;protein_id=HJH9165051.1;transl_table=11 DALFDJ020000020.1 tpg gene 98202 99635 . - . ID=gene-O5D79_003636;Name=rfbK;gbkey=Gene;gene=rfbK;gene_biotype=protein_coding;locus_tag=O5D79_003636 DALFDJ020000020.1 Protein Homology CDS 98202 99635 . - 0 ID=cds-HJH9165052.1;Parent=gene-O5D79_003636;Dbxref=NCBI_GP:HJH9165052.1;Name=HJH9165052.1;gbkey=CDS;gene=rfbK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461028.1;locus_tag=O5D79_003636;product=O-antigen biosynthesis phosphomannomutase RfbK;protein_id=HJH9165052.1;transl_table=11 DALFDJ020000020.1 tpg gene 99622 101061 . - . ID=gene-O5D79_003637;Name=O5D79_003637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003637 DALFDJ020000020.1 Protein Homology CDS 99622 101061 . - 0 ID=cds-HJH9165053.1;Parent=gene-O5D79_003637;Dbxref=NCBI_GP:HJH9165053.1;Name=HJH9165053.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461029.1;locus_tag=O5D79_003637;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=HJH9165053.1;transl_table=11 DALFDJ020000020.1 tpg gene 101062 102009 . - . ID=gene-O5D79_003638;Name=O5D79_003638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003638 DALFDJ020000020.1 Protein Homology CDS 101062 102009 . - 0 ID=cds-HJH9165054.1;Parent=gene-O5D79_003638;Dbxref=NCBI_GP:HJH9165054.1;Name=HJH9165054.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138993.1;locus_tag=O5D79_003638;product=glycosyltransferase family 2 protein;protein_id=HJH9165054.1;transl_table=11 DALFDJ020000020.1 tpg gene 102013 103098 . - . ID=gene-O5D79_003639;Name=O5D79_003639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003639 DALFDJ020000020.1 Protein Homology CDS 102013 103098 . - 0 ID=cds-HJH9165055.1;Parent=gene-O5D79_003639;Dbxref=NCBI_GP:HJH9165055.1;Name=HJH9165055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015633002.1;locus_tag=O5D79_003639;product=glycosyltransferase;protein_id=HJH9165055.1;transl_table=11 DALFDJ020000020.1 tpg gene 103091 104269 . - . ID=gene-O5D79_003640;Name=O5D79_003640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003640 DALFDJ020000020.1 Protein Homology CDS 103091 104269 . - 0 ID=cds-HJH9165056.1;Parent=gene-O5D79_003640;Dbxref=NCBI_GP:HJH9165056.1;Name=HJH9165056.1;Ontology_term=GO:0008755,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=O antigen polymerase activity|0008755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000231471.1;locus_tag=O5D79_003640;product=O-antigen polymerase;protein_id=HJH9165056.1;transl_table=11 DALFDJ020000020.1 tpg gene 104458 105779 . - . ID=gene-O5D79_003641;Name=O5D79_003641;end_range=105779,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003641;partial=true DALFDJ020000020.1 Protein Homology CDS 104458 105779 . - 2 ID=cds-HJH9165057.1;Parent=gene-O5D79_003641;Dbxref=NCBI_GP:HJH9165057.1;Name=HJH9165057.1;Ontology_term=GO:0140327,GO:0016020;end_range=105779,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000489516.1;locus_tag=O5D79_003641;partial=true;product=lipopolysaccharide biosynthesis protein;protein_id=HJH9165057.1;transl_table=11 ##sequence-region DALFDJ020000021.1 1 105116 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000021.1 tpg region 1 105116 . + . ID=DALFDJ020000021.1:1..105116;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000021.1 tpg gene 1 1494 . + . ID=gene-O5D79_003642;Name=O5D79_003642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003642;partial=true;start_range=.,1 DALFDJ020000021.1 Protein Homology CDS 1 1494 . + 0 ID=cds-HJH9165058.1;Parent=gene-O5D79_003642;Dbxref=NCBI_GP:HJH9165058.1;Name=HJH9165058.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000813703.1;locus_tag=O5D79_003642;partial=true;product=sulfatase-like hydrolase/transferase;protein_id=HJH9165058.1;start_range=.,1;transl_table=11 DALFDJ020000021.1 tpg gene 1564 2421 . - . ID=gene-O5D79_003643;Name=yibB;gbkey=Gene;gene=yibB;gene_biotype=protein_coding;locus_tag=O5D79_003643 DALFDJ020000021.1 Protein Homology CDS 1564 2421 . - 0 ID=cds-HJH9165059.1;Parent=gene-O5D79_003643;Dbxref=NCBI_GP:HJH9165059.1;Name=HJH9165059.1;gbkey=CDS;gene=yibB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000842825.1;locus_tag=O5D79_003643;product=protein YibB;protein_id=HJH9165059.1;transl_table=11 DALFDJ020000021.1 tpg gene 3115 3312 . + . ID=gene-O5D79_003644;Name=O5D79_003644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003644 DALFDJ020000021.1 Protein Homology CDS 3115 3312 . + 0 ID=cds-HJH9165060.1;Parent=gene-O5D79_003644;Dbxref=NCBI_GP:HJH9165060.1;Name=HJH9165060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913868.1;locus_tag=O5D79_003644;product=hypothetical protein;protein_id=HJH9165060.1;transl_table=11 DALFDJ020000021.1 tpg gene 3981 4355 . - . ID=gene-O5D79_003645;Name=O5D79_003645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003645 DALFDJ020000021.1 Protein Homology CDS 3981 4355 . - 0 ID=cds-HJH9165061.1;Parent=gene-O5D79_003645;Dbxref=NCBI_GP:HJH9165061.1;Name=HJH9165061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000033281.1;locus_tag=O5D79_003645;product=DUF1353 domain-containing protein;protein_id=HJH9165061.1;transl_table=11 DALFDJ020000021.1 tpg gene 4479 5057 . - . ID=gene-O5D79_003646;Name=O5D79_003646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003646 DALFDJ020000021.1 Protein Homology CDS 4479 5057 . - 0 ID=cds-HJH9165062.1;Parent=gene-O5D79_003646;Dbxref=NCBI_GP:HJH9165062.1;Name=HJH9165062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001021562.1;locus_tag=O5D79_003646;product=DUF4376 domain-containing protein;protein_id=HJH9165062.1;transl_table=11 DALFDJ020000021.1 tpg gene 5067 6041 . - . ID=gene-O5D79_003647;Name=O5D79_003647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003647 DALFDJ020000021.1 Protein Homology CDS 5067 6041 . - 0 ID=cds-HJH9165063.1;Parent=gene-O5D79_003647;Dbxref=NCBI_GP:HJH9165063.1;Name=HJH9165063.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019996.6;locus_tag=O5D79_003647;product=prophage tail fiber N-terminal domain-containing protein;protein_id=HJH9165063.1;transl_table=11 DALFDJ020000021.1 tpg gene 6028 6783 . - . ID=gene-O5D79_003648;Name=O5D79_003648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003648 DALFDJ020000021.1 Protein Homology CDS 6028 6783 . - 0 ID=cds-HJH9165064.1;Parent=gene-O5D79_003648;Dbxref=NCBI_GP:HJH9165064.1;Name=HJH9165064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406345.1;locus_tag=O5D79_003648;product=DUF4376 domain-containing protein;protein_id=HJH9165064.1;transl_table=11 DALFDJ020000021.1 tpg pseudogene 6783 7334 . - . ID=gene-O5D79_003649;Name=O5D79_003649;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003649;pseudo=true DALFDJ020000021.1 Protein Homology CDS 6783 7334 . - 0 ID=cds-O5D79_003649;Parent=gene-O5D79_003649;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459903.1;locus_tag=O5D79_003649;product=phage tail protein;pseudo=true;transl_table=11 DALFDJ020000021.1 tpg gene 7816 8391 . - . ID=gene-O5D79_003650;Name=O5D79_003650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003650 DALFDJ020000021.1 Protein Homology CDS 7816 8391 . - 0 ID=cds-HJH9165065.1;Parent=gene-O5D79_003650;Dbxref=NCBI_GP:HJH9165065.1;Name=HJH9165065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147243.1;locus_tag=O5D79_003650;product=DUF2612 domain-containing protein;protein_id=HJH9165065.1;transl_table=11 DALFDJ020000021.1 tpg gene 8388 9581 . - . ID=gene-O5D79_003651;Name=O5D79_003651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003651 DALFDJ020000021.1 Protein Homology CDS 8388 9581 . - 0 ID=cds-HJH9165066.1;Parent=gene-O5D79_003651;Dbxref=NCBI_GP:HJH9165066.1;Name=HJH9165066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004393463.1;locus_tag=O5D79_003651;product=baseplate J/gp47 family protein;protein_id=HJH9165066.1;transl_table=11 DALFDJ020000021.1 tpg gene 9574 9921 . - . ID=gene-O5D79_003652;Name=O5D79_003652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003652 DALFDJ020000021.1 Protein Homology CDS 9574 9921 . - 0 ID=cds-HJH9165067.1;Parent=gene-O5D79_003652;Dbxref=NCBI_GP:HJH9165067.1;Name=HJH9165067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001270645.1;locus_tag=O5D79_003652;product=hypothetical protein;protein_id=HJH9165067.1;transl_table=11 DALFDJ020000021.1 tpg gene 9918 10667 . - . ID=gene-O5D79_003653;Name=O5D79_003653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003653 DALFDJ020000021.1 Protein Homology CDS 9918 10667 . - 0 ID=cds-HJH9165068.1;Parent=gene-O5D79_003653;Dbxref=NCBI_GP:HJH9165068.1;Name=HJH9165068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192275.1;locus_tag=O5D79_003653;product=Gp138 family membrane-puncturing spike protein;protein_id=HJH9165068.1;transl_table=11 DALFDJ020000021.1 tpg gene 10895 11233 . - . ID=gene-O5D79_003654;Name=O5D79_003654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003654 DALFDJ020000021.1 Protein Homology CDS 10895 11233 . - 0 ID=cds-HJH9165069.1;Parent=gene-O5D79_003654;Dbxref=NCBI_GP:HJH9165069.1;Name=HJH9165069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000832851.1;locus_tag=O5D79_003654;product=hypothetical protein;protein_id=HJH9165069.1;transl_table=11 DALFDJ020000021.1 tpg gene 11240 12241 . - . ID=gene-O5D79_003655;Name=O5D79_003655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003655 DALFDJ020000021.1 Protein Homology CDS 11240 12241 . - 0 ID=cds-HJH9165070.1;Parent=gene-O5D79_003655;Dbxref=NCBI_GP:HJH9165070.1;Name=HJH9165070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551483.1;locus_tag=O5D79_003655;product=hypothetical protein;protein_id=HJH9165070.1;transl_table=11 DALFDJ020000021.1 tpg gene 12245 12550 . - . ID=gene-O5D79_003656;Name=O5D79_003656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003656 DALFDJ020000021.1 Protein Homology CDS 12245 12550 . - 0 ID=cds-HJH9165071.1;Parent=gene-O5D79_003656;Dbxref=NCBI_GP:HJH9165071.1;Name=HJH9165071.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046292.2;locus_tag=O5D79_003656;product=phage baseplate plug family protein;protein_id=HJH9165071.1;transl_table=11 DALFDJ020000021.1 tpg gene 12547 13080 . - . ID=gene-O5D79_003657;Name=O5D79_003657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003657 DALFDJ020000021.1 Protein Homology CDS 12547 13080 . - 0 ID=cds-HJH9165072.1;Parent=gene-O5D79_003657;Dbxref=NCBI_GP:HJH9165072.1;Name=HJH9165072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001515089.1;locus_tag=O5D79_003657;product=phage baseplate protein;protein_id=HJH9165072.1;transl_table=11 DALFDJ020000021.1 tpg gene 13143 15230 . - . ID=gene-O5D79_003658;Name=O5D79_003658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003658 DALFDJ020000021.1 GeneMarkS-2+ CDS 13143 15230 . - 0 ID=cds-HJH9165073.1;Parent=gene-O5D79_003658;Dbxref=NCBI_GP:HJH9165073.1;Name=HJH9165073.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_003658;product=lytic transglycosylase;protein_id=HJH9165073.1;transl_table=11 DALFDJ020000021.1 tpg gene 15220 15372 . - . ID=gene-O5D79_003659;Name=O5D79_003659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003659 DALFDJ020000021.1 Protein Homology CDS 15220 15372 . - 0 ID=cds-HJH9165074.1;Parent=gene-O5D79_003659;Dbxref=NCBI_GP:HJH9165074.1;Name=HJH9165074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915210.1;locus_tag=O5D79_003659;product=DUF6889 family protein;protein_id=HJH9165074.1;transl_table=11 DALFDJ020000021.1 tpg gene 15417 15824 . - . ID=gene-O5D79_003660;Name=O5D79_003660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003660 DALFDJ020000021.1 Protein Homology CDS 15417 15824 . - 0 ID=cds-HJH9165075.1;Parent=gene-O5D79_003660;Dbxref=NCBI_GP:HJH9165075.1;Name=HJH9165075.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152564.1;locus_tag=O5D79_003660;product=phage tail assembly chaperone;protein_id=HJH9165075.1;transl_table=11 DALFDJ020000021.1 tpg gene 15828 16271 . - . ID=gene-O5D79_003661;Name=O5D79_003661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003661 DALFDJ020000021.1 Protein Homology CDS 15828 16271 . - 0 ID=cds-HJH9165076.1;Parent=gene-O5D79_003661;Dbxref=NCBI_GP:HJH9165076.1;Name=HJH9165076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000017200.1;locus_tag=O5D79_003661;product=phage structural protein;protein_id=HJH9165076.1;transl_table=11 DALFDJ020000021.1 tpg gene 16281 17759 . - . ID=gene-O5D79_003662;Name=O5D79_003662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003662 DALFDJ020000021.1 Protein Homology CDS 16281 17759 . - 0 ID=cds-HJH9165077.1;Parent=gene-O5D79_003662;Dbxref=NCBI_GP:HJH9165077.1;Name=HJH9165077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411485.1;locus_tag=O5D79_003662;product=DUF3383 domain-containing protein;protein_id=HJH9165077.1;transl_table=11 DALFDJ020000021.1 tpg gene 17764 18309 . - . ID=gene-O5D79_003663;Name=O5D79_003663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003663 DALFDJ020000021.1 Protein Homology CDS 17764 18309 . - 0 ID=cds-HJH9165078.1;Parent=gene-O5D79_003663;Dbxref=NCBI_GP:HJH9165078.1;Name=HJH9165078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013578257.1;locus_tag=O5D79_003663;product=phage neck terminator protein;protein_id=HJH9165078.1;transl_table=11 DALFDJ020000021.1 tpg gene 18302 18688 . - . ID=gene-O5D79_003664;Name=O5D79_003664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003664 DALFDJ020000021.1 Protein Homology CDS 18302 18688 . - 0 ID=cds-HJH9165079.1;Parent=gene-O5D79_003664;Dbxref=NCBI_GP:HJH9165079.1;Name=HJH9165079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001687820.1;locus_tag=O5D79_003664;product=head-tail adaptor;protein_id=HJH9165079.1;transl_table=11 DALFDJ020000021.1 tpg gene 18688 19305 . - . ID=gene-O5D79_003665;Name=O5D79_003665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003665 DALFDJ020000021.1 Protein Homology CDS 18688 19305 . - 0 ID=cds-HJH9165080.1;Parent=gene-O5D79_003665;Dbxref=NCBI_GP:HJH9165080.1;Name=HJH9165080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118741.1;locus_tag=O5D79_003665;product=hypothetical protein;protein_id=HJH9165080.1;transl_table=11 DALFDJ020000021.1 tpg gene 19302 19697 . - . ID=gene-O5D79_003666;Name=O5D79_003666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003666 DALFDJ020000021.1 Protein Homology CDS 19302 19697 . - 0 ID=cds-HJH9165081.1;Parent=gene-O5D79_003666;Dbxref=NCBI_GP:HJH9165081.1;Name=HJH9165081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411634.1;locus_tag=O5D79_003666;product=DUF4054 domain-containing protein;protein_id=HJH9165081.1;transl_table=11 DALFDJ020000021.1 tpg gene 19732 20676 . - . ID=gene-O5D79_003667;Name=O5D79_003667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003667 DALFDJ020000021.1 Protein Homology CDS 19732 20676 . - 0 ID=cds-HJH9165082.1;Parent=gene-O5D79_003667;Dbxref=NCBI_GP:HJH9165082.1;Name=HJH9165082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120172.1;locus_tag=O5D79_003667;product=DUF2184 domain-containing protein;protein_id=HJH9165082.1;transl_table=11 DALFDJ020000021.1 tpg gene 20692 21189 . - . ID=gene-O5D79_003668;Name=O5D79_003668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003668 DALFDJ020000021.1 Protein Homology CDS 20692 21189 . - 0 ID=cds-HJH9165083.1;Parent=gene-O5D79_003668;Dbxref=NCBI_GP:HJH9165083.1;Name=HJH9165083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411636.1;locus_tag=O5D79_003668;product=structural cement protein Gp24;protein_id=HJH9165083.1;transl_table=11 DALFDJ020000021.1 tpg gene 21189 22460 . - . ID=gene-O5D79_003669;Name=O5D79_003669;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003669 DALFDJ020000021.1 Protein Homology CDS 21189 22460 . - 0 ID=cds-HJH9165084.1;Parent=gene-O5D79_003669;Dbxref=NCBI_GP:HJH9165084.1;Name=HJH9165084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118737.1;locus_tag=O5D79_003669;product=DUF2213 domain-containing protein;protein_id=HJH9165084.1;transl_table=11 DALFDJ020000021.1 tpg gene 22457 23164 . - . ID=gene-O5D79_003670;Name=O5D79_003670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003670 DALFDJ020000021.1 Protein Homology CDS 22457 23164 . - 0 ID=cds-HJH9165085.1;Parent=gene-O5D79_003670;Dbxref=NCBI_GP:HJH9165085.1;Name=HJH9165085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010848172.1;locus_tag=O5D79_003670;product=phage minor head protein;protein_id=HJH9165085.1;transl_table=11 DALFDJ020000021.1 tpg gene 23130 24578 . - . ID=gene-O5D79_003671;Name=O5D79_003671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003671 DALFDJ020000021.1 Protein Homology CDS 23130 24578 . - 0 ID=cds-HJH9165086.1;Parent=gene-O5D79_003671;Dbxref=NCBI_GP:HJH9165086.1;Name=HJH9165086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526488.1;locus_tag=O5D79_003671;product=DUF1073 domain-containing protein;protein_id=HJH9165086.1;transl_table=11 DALFDJ020000021.1 tpg gene 24578 25933 . - . ID=gene-O5D79_003672;Name=O5D79_003672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003672 DALFDJ020000021.1 Protein Homology CDS 24578 25933 . - 0 ID=cds-HJH9165087.1;Parent=gene-O5D79_003672;Dbxref=NCBI_GP:HJH9165087.1;Name=HJH9165087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004094681.1;locus_tag=O5D79_003672;product=PBSX family phage terminase large subunit;protein_id=HJH9165087.1;transl_table=11 DALFDJ020000021.1 tpg gene 25920 26357 . - . ID=gene-O5D79_003673;Name=O5D79_003673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003673 DALFDJ020000021.1 Protein Homology CDS 25920 26357 . - 0 ID=cds-HJH9165088.1;Parent=gene-O5D79_003673;Dbxref=NCBI_GP:HJH9165088.1;Name=HJH9165088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113731.1;locus_tag=O5D79_003673;product=terminase;protein_id=HJH9165088.1;transl_table=11 DALFDJ020000021.1 tpg gene 26481 26948 . - . ID=gene-O5D79_003674;Name=O5D79_003674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003674 DALFDJ020000021.1 Protein Homology CDS 26481 26948 . - 0 ID=cds-HJH9165089.1;Parent=gene-O5D79_003674;Dbxref=NCBI_GP:HJH9165089.1;Name=HJH9165089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010835730.1;locus_tag=O5D79_003674;product=lysis protein;protein_id=HJH9165089.1;transl_table=11 DALFDJ020000021.1 tpg gene 26945 27433 . - . ID=gene-O5D79_003675;Name=O5D79_003675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003675 DALFDJ020000021.1 Protein Homology CDS 26945 27433 . - 0 ID=cds-HJH9165090.1;Parent=gene-O5D79_003675;Dbxref=NCBI_GP:HJH9165090.1;Name=HJH9165090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001208103.1;locus_tag=O5D79_003675;product=lysozyme;protein_id=HJH9165090.1;transl_table=11 DALFDJ020000021.1 tpg gene 27411 27644 . - . ID=gene-O5D79_003676;Name=O5D79_003676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003676 DALFDJ020000021.1 Protein Homology CDS 27411 27644 . - 0 ID=cds-HJH9165091.1;Parent=gene-O5D79_003676;Dbxref=NCBI_GP:HJH9165091.1;Name=HJH9165091.1;Ontology_term=GO:0001907,GO:0019835,GO:0140911;gbkey=CDS;go_function=pore-forming activity|0140911||IEA;go_process=symbiont-mediated killing of host cell|0001907||IEA,cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001312301.1;locus_tag=O5D79_003676;product=phage holin;protein_id=HJH9165091.1;transl_table=11 DALFDJ020000021.1 tpg gene 28403 29071 . - . ID=gene-O5D79_003677;Name=O5D79_003677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003677 DALFDJ020000021.1 Protein Homology CDS 28403 29071 . - 0 ID=cds-HJH9165092.1;Parent=gene-O5D79_003677;Dbxref=NCBI_GP:HJH9165092.1;Name=HJH9165092.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018074.6;locus_tag=O5D79_003677;product=bacteriophage antitermination protein Q;protein_id=HJH9165092.1;transl_table=11 DALFDJ020000021.1 tpg gene 29068 29628 . - . ID=gene-O5D79_003678;Name=O5D79_003678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003678 DALFDJ020000021.1 Protein Homology CDS 29068 29628 . - 0 ID=cds-HJH9165093.1;Parent=gene-O5D79_003678;Dbxref=NCBI_GP:HJH9165093.1;Name=HJH9165093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232227.1;locus_tag=O5D79_003678;product=recombination protein NinG;protein_id=HJH9165093.1;transl_table=11 DALFDJ020000021.1 tpg gene 29637 30086 . - . ID=gene-O5D79_003679;Name=O5D79_003679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003679 DALFDJ020000021.1 Protein Homology CDS 29637 30086 . - 0 ID=cds-HJH9165094.1;Parent=gene-O5D79_003679;Dbxref=NCBI_GP:HJH9165094.1;Name=HJH9165094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000402091.1;locus_tag=O5D79_003679;product=DUF1367 family protein;protein_id=HJH9165094.1;transl_table=11 DALFDJ020000021.1 tpg gene 30086 31060 . - . ID=gene-O5D79_003680;Name=O5D79_003680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003680 DALFDJ020000021.1 Protein Homology CDS 30086 31060 . - 0 ID=cds-HJH9165095.1;Parent=gene-O5D79_003680;Dbxref=NCBI_GP:HJH9165095.1;Name=HJH9165095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001694414.1;locus_tag=O5D79_003680;product=DUF7146 domain-containing protein;protein_id=HJH9165095.1;transl_table=11 DALFDJ020000021.1 tpg gene 31054 32574 . - . ID=gene-O5D79_003681;Name=O5D79_003681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003681 DALFDJ020000021.1 Protein Homology CDS 31054 32574 . - 0 ID=cds-HJH9165096.1;Parent=gene-O5D79_003681;Dbxref=NCBI_GP:HJH9165096.1;Name=HJH9165096.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232230.1;locus_tag=O5D79_003681;product=DEAD/DEAH box helicase family protein;protein_id=HJH9165096.1;transl_table=11 DALFDJ020000021.1 tpg gene 32587 32955 . - . ID=gene-O5D79_003682;Name=O5D79_003682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003682 DALFDJ020000021.1 Protein Homology CDS 32587 32955 . - 0 ID=cds-HJH9165097.1;Parent=gene-O5D79_003682;Dbxref=NCBI_GP:HJH9165097.1;Name=HJH9165097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000470023.1;locus_tag=O5D79_003682;product=hypothetical protein;protein_id=HJH9165097.1;transl_table=11 DALFDJ020000021.1 tpg gene 33492 33731 . - . ID=gene-O5D79_003683;Name=O5D79_003683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003683 DALFDJ020000021.1 Protein Homology CDS 33492 33731 . - 0 ID=cds-HJH9165098.1;Parent=gene-O5D79_003683;Dbxref=NCBI_GP:HJH9165098.1;Name=HJH9165098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660859.1;locus_tag=O5D79_003683;product=helix-turn-helix domain-containing protein;protein_id=HJH9165098.1;transl_table=11 DALFDJ020000021.1 tpg gene 33834 34553 . + . ID=gene-O5D79_003684;Name=O5D79_003684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003684 DALFDJ020000021.1 Protein Homology CDS 33834 34553 . + 0 ID=cds-HJH9165099.1;Parent=gene-O5D79_003684;Dbxref=NCBI_GP:HJH9165099.1;Name=HJH9165099.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000162431.1;locus_tag=O5D79_003684;product=LexA family protein;protein_id=HJH9165099.1;transl_table=11 DALFDJ020000021.1 tpg gene 34747 35040 . + . ID=gene-O5D79_003685;Name=O5D79_003685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003685 DALFDJ020000021.1 Protein Homology CDS 34747 35040 . + 0 ID=cds-HJH9165100.1;Parent=gene-O5D79_003685;Dbxref=NCBI_GP:HJH9165100.1;Name=HJH9165100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004916403.1;locus_tag=O5D79_003685;product=hypothetical protein;protein_id=HJH9165100.1;transl_table=11 DALFDJ020000021.1 tpg gene 35049 35396 . + . ID=gene-O5D79_003686;Name=O5D79_003686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003686 DALFDJ020000021.1 Protein Homology CDS 35049 35396 . + 0 ID=cds-HJH9165101.1;Parent=gene-O5D79_003686;Dbxref=NCBI_GP:HJH9165101.1;Name=HJH9165101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004916401.1;locus_tag=O5D79_003686;product=hypothetical protein;protein_id=HJH9165101.1;transl_table=11 DALFDJ020000021.1 tpg gene 35844 36026 . + . ID=gene-O5D79_003687;Name=O5D79_003687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003687 DALFDJ020000021.1 GeneMarkS-2+ CDS 35844 36026 . + 0 ID=cds-HJH9165102.1;Parent=gene-O5D79_003687;Dbxref=NCBI_GP:HJH9165102.1;Name=HJH9165102.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_003687;product=hypothetical protein;protein_id=HJH9165102.1;transl_table=11 DALFDJ020000021.1 tpg gene 36217 36399 . + . ID=gene-O5D79_003688;Name=O5D79_003688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003688 DALFDJ020000021.1 GeneMarkS-2+ CDS 36217 36399 . + 0 ID=cds-HJH9165103.1;Parent=gene-O5D79_003688;Dbxref=NCBI_GP:HJH9165103.1;Name=HJH9165103.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_003688;product=hypothetical protein;protein_id=HJH9165103.1;transl_table=11 DALFDJ020000021.1 tpg gene 36508 36867 . + . ID=gene-O5D79_003689;Name=O5D79_003689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003689 DALFDJ020000021.1 GeneMarkS-2+ CDS 36508 36867 . + 0 ID=cds-HJH9165104.1;Parent=gene-O5D79_003689;Dbxref=NCBI_GP:HJH9165104.1;Name=HJH9165104.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_003689;product=hypothetical protein;protein_id=HJH9165104.1;transl_table=11 DALFDJ020000021.1 tpg gene 37007 37387 . + . ID=gene-O5D79_003690;Name=O5D79_003690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003690 DALFDJ020000021.1 GeneMarkS-2+ CDS 37007 37387 . + 0 ID=cds-HJH9165105.1;Parent=gene-O5D79_003690;Dbxref=NCBI_GP:HJH9165105.1;Name=HJH9165105.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_003690;product=hypothetical protein;protein_id=HJH9165105.1;transl_table=11 DALFDJ020000021.1 tpg gene 37441 38529 . + . ID=gene-O5D79_003691;Name=O5D79_003691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003691 DALFDJ020000021.1 Protein Homology CDS 37441 38529 . + 0 ID=cds-HJH9165106.1;Parent=gene-O5D79_003691;Dbxref=NCBI_GP:HJH9165106.1;Name=HJH9165106.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024870.6;locus_tag=O5D79_003691;product=AAA family ATPase;protein_id=HJH9165106.1;transl_table=11 DALFDJ020000021.1 tpg gene 38510 38866 . + . ID=gene-O5D79_003692;Name=O5D79_003692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003692 DALFDJ020000021.1 Protein Homology CDS 38510 38866 . + 0 ID=cds-HJH9165107.1;Parent=gene-O5D79_003692;Dbxref=NCBI_GP:HJH9165107.1;Name=HJH9165107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001071603.1;locus_tag=O5D79_003692;product=hypothetical protein;protein_id=HJH9165107.1;transl_table=11 DALFDJ020000021.1 tpg gene 38925 39746 . + . ID=gene-O5D79_003693;Name=O5D79_003693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003693 DALFDJ020000021.1 Protein Homology CDS 38925 39746 . + 0 ID=cds-HJH9165108.1;Parent=gene-O5D79_003693;Dbxref=NCBI_GP:HJH9165108.1;Name=HJH9165108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813840.1;locus_tag=O5D79_003693;product=YfdQ family protein;protein_id=HJH9165108.1;transl_table=11 DALFDJ020000021.1 tpg gene 39791 40096 . + . ID=gene-O5D79_003694;Name=O5D79_003694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003694 DALFDJ020000021.1 GeneMarkS-2+ CDS 39791 40096 . + 0 ID=cds-HJH9165109.1;Parent=gene-O5D79_003694;Dbxref=NCBI_GP:HJH9165109.1;Name=HJH9165109.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_003694;product=hypothetical protein;protein_id=HJH9165109.1;transl_table=11 DALFDJ020000021.1 tpg gene 40198 40440 . + . ID=gene-O5D79_003695;Name=O5D79_003695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003695 DALFDJ020000021.1 Protein Homology CDS 40198 40440 . + 0 ID=cds-HJH9165110.1;Parent=gene-O5D79_003695;Dbxref=NCBI_GP:HJH9165110.1;Name=HJH9165110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008825.1;locus_tag=O5D79_003695;product=ANR family transcriptional regulator;protein_id=HJH9165110.1;transl_table=11 DALFDJ020000021.1 tpg gene 40437 40910 . + . ID=gene-O5D79_003696;Name=O5D79_003696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003696 DALFDJ020000021.1 Protein Homology CDS 40437 40910 . + 0 ID=cds-HJH9165111.1;Parent=gene-O5D79_003696;Dbxref=NCBI_GP:HJH9165111.1;Name=HJH9165111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000665853.1;locus_tag=O5D79_003696;product=hypothetical protein;protein_id=HJH9165111.1;transl_table=11 DALFDJ020000021.1 tpg gene 40907 41626 . + . ID=gene-O5D79_003697;Name=O5D79_003697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003697 DALFDJ020000021.1 Protein Homology CDS 40907 41626 . + 0 ID=cds-HJH9165112.1;Parent=gene-O5D79_003697;Dbxref=NCBI_GP:HJH9165112.1;Name=HJH9165112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034220.1;locus_tag=O5D79_003697;product=ead/Ea22-like family protein;protein_id=HJH9165112.1;transl_table=11 DALFDJ020000021.1 tpg gene 41619 42185 . + . ID=gene-O5D79_003698;Name=O5D79_003698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003698 DALFDJ020000021.1 Protein Homology CDS 41619 42185 . + 0 ID=cds-HJH9165113.1;Parent=gene-O5D79_003698;Dbxref=NCBI_GP:HJH9165113.1;Name=HJH9165113.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660128.1;locus_tag=O5D79_003698;product=phage N-6-adenine-methyltransferase;protein_id=HJH9165113.1;transl_table=11 DALFDJ020000021.1 tpg gene 42200 42406 . + . ID=gene-O5D79_003699;Name=O5D79_003699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003699 DALFDJ020000021.1 Protein Homology CDS 42200 42406 . + 0 ID=cds-HJH9165114.1;Parent=gene-O5D79_003699;Dbxref=NCBI_GP:HJH9165114.1;Name=HJH9165114.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025352.6;locus_tag=O5D79_003699;product=DUF4224 domain-containing protein;protein_id=HJH9165114.1;transl_table=11 DALFDJ020000021.1 tpg gene 42406 43434 . + . ID=gene-O5D79_003700;Name=O5D79_003700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003700 DALFDJ020000021.1 Protein Homology CDS 42406 43434 . + 0 ID=cds-HJH9165115.1;Parent=gene-O5D79_003700;Dbxref=NCBI_GP:HJH9165115.1;Name=HJH9165115.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240694.1;locus_tag=O5D79_003700;product=tyrosine-type recombinase/integrase;protein_id=HJH9165115.1;transl_table=11 DALFDJ020000021.1 tpg gene 43503 43590 . - . ID=gene-O5D79_003701;Name=O5D79_003701;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_003701 DALFDJ020000021.1 tRNAscan-SE tRNA 43503 43590 . - . ID=rna-O5D79_003701;Parent=gene-O5D79_003701;anticodon=(pos:complement(43554..43556));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003701;product=tRNA-Ser DALFDJ020000021.1 tRNAscan-SE exon 43503 43590 . - . ID=exon-O5D79_003701-1;Parent=rna-O5D79_003701;anticodon=(pos:complement(43554..43556));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003701;product=tRNA-Ser DALFDJ020000021.1 tpg gene 43985 44644 . + . ID=gene-O5D79_003702;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=O5D79_003702 DALFDJ020000021.1 Protein Homology CDS 43985 44644 . + 0 ID=cds-HJH9165116.1;Parent=gene-O5D79_003702;Dbxref=NCBI_GP:HJH9165116.1;Name=HJH9165116.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=O5D79_003702;product=FtsH protease modulator YccA;protein_id=HJH9165116.1;transl_table=11 DALFDJ020000021.1 tpg gene 44731 45060 . + . ID=gene-O5D79_003703;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=O5D79_003703 DALFDJ020000021.1 Protein Homology CDS 44731 45060 . + 0 ID=cds-HJH9165117.1;Parent=gene-O5D79_003703;Dbxref=NCBI_GP:HJH9165117.1;Name=HJH9165117.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460058.1;locus_tag=O5D79_003703;product=sulfurtransferase TusE;protein_id=HJH9165117.1;transl_table=11 DALFDJ020000021.1 tpg gene 45057 45338 . - . ID=gene-O5D79_003704;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=O5D79_003704 DALFDJ020000021.1 Protein Homology CDS 45057 45338 . - 0 ID=cds-HJH9165118.1;Parent=gene-O5D79_003704;Dbxref=NCBI_GP:HJH9165118.1;Name=HJH9165118.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460057.1;locus_tag=O5D79_003704;product=acylphosphatase;protein_id=HJH9165118.1;transl_table=11 DALFDJ020000021.1 tpg gene 45387 46166 . - . ID=gene-O5D79_003705;Name=O5D79_003705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003705 DALFDJ020000021.1 Protein Homology CDS 45387 46166 . - 0 ID=cds-HJH9165119.1;Parent=gene-O5D79_003705;Dbxref=NCBI_GP:HJH9165119.1;Name=HJH9165119.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460056.1;locus_tag=O5D79_003705;product=helix-turn-helix transcriptional regulator;protein_id=HJH9165119.1;transl_table=11 DALFDJ020000021.1 tpg gene 46192 46740 . - . ID=gene-O5D79_003706;Name=O5D79_003706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003706 DALFDJ020000021.1 Protein Homology CDS 46192 46740 . - 0 ID=cds-HJH9165120.1;Parent=gene-O5D79_003706;Dbxref=NCBI_GP:HJH9165120.1;Name=HJH9165120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460055.1;locus_tag=O5D79_003706;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=HJH9165120.1;transl_table=11 DALFDJ020000021.1 tpg gene 46955 48166 . + . ID=gene-O5D79_003707;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=O5D79_003707 DALFDJ020000021.1 Protein Homology CDS 46955 48166 . + 0 ID=cds-HJH9165121.1;Parent=gene-O5D79_003707;Dbxref=NCBI_GP:HJH9165121.1;Name=HJH9165121.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=O5D79_003707;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=HJH9165121.1;transl_table=11 DALFDJ020000021.1 tpg gene 48224 48541 . + . ID=gene-O5D79_003708;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=O5D79_003708 DALFDJ020000021.1 Protein Homology CDS 48224 48541 . + 0 ID=cds-HJH9165122.1;Parent=gene-O5D79_003708;Dbxref=NCBI_GP:HJH9165122.1;Name=HJH9165122.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=O5D79_003708;product=heat shock protein HspQ;protein_id=HJH9165122.1;transl_table=11 DALFDJ020000021.1 tpg gene 48586 48999 . - . ID=gene-O5D79_003709;Name=O5D79_003709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003709 DALFDJ020000021.1 Protein Homology CDS 48586 48999 . - 0 ID=cds-HJH9165123.1;Parent=gene-O5D79_003709;Dbxref=NCBI_GP:HJH9165123.1;Name=HJH9165123.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=O5D79_003709;product=CoA-binding protein;protein_id=HJH9165123.1;transl_table=11 DALFDJ020000021.1 tpg gene 49173 49835 . + . ID=gene-O5D79_003710;Name=O5D79_003710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003710 DALFDJ020000021.1 Protein Homology CDS 49173 49835 . + 0 ID=cds-HJH9165124.1;Parent=gene-O5D79_003710;Dbxref=NCBI_GP:HJH9165124.1;Name=HJH9165124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460051.1;locus_tag=O5D79_003710;product=DUF2057 family protein;protein_id=HJH9165124.1;transl_table=11 DALFDJ020000021.1 tpg gene 49930 50388 . + . ID=gene-O5D79_003711;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=O5D79_003711 DALFDJ020000021.1 Protein Homology CDS 49930 50388 . + 0 ID=cds-HJH9165125.1;Parent=gene-O5D79_003711;Dbxref=NCBI_GP:HJH9165125.1;Name=HJH9165125.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460050.1;locus_tag=O5D79_003711;product=methylglyoxal synthase;protein_id=HJH9165125.1;transl_table=11 DALFDJ020000021.1 tpg gene 50424 52478 . - . ID=gene-O5D79_003712;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=O5D79_003712 DALFDJ020000021.1 Protein Homology CDS 50424 52478 . - 0 ID=cds-HJH9165126.1;Parent=gene-O5D79_003712;Dbxref=NCBI_GP:HJH9165126.1;Name=HJH9165126.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460049.1;locus_tag=O5D79_003712;product=DNA helicase IV;protein_id=HJH9165126.1;transl_table=11 DALFDJ020000021.1 tpg gene 52602 53048 . + . ID=gene-O5D79_003713;Name=O5D79_003713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003713 DALFDJ020000021.1 Protein Homology CDS 52602 53048 . + 0 ID=cds-HJH9165127.1;Parent=gene-O5D79_003713;Dbxref=NCBI_GP:HJH9165127.1;Name=HJH9165127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460048.1;locus_tag=O5D79_003713;product=YccF domain-containing protein;protein_id=HJH9165127.1;transl_table=11 DALFDJ020000021.1 tpg gene 53067 55220 . + . ID=gene-O5D79_003714;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=O5D79_003714 DALFDJ020000021.1 Protein Homology CDS 53067 55220 . + 0 ID=cds-HJH9165128.1;Parent=gene-O5D79_003714;Dbxref=NCBI_GP:HJH9165128.1;Name=HJH9165128.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460047.1;locus_tag=O5D79_003714;product=YccS family putative transporter;protein_id=HJH9165128.1;transl_table=11 DALFDJ020000021.1 tpg gene 55207 55812 . - . ID=gene-O5D79_003715;Name=O5D79_003715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003715 DALFDJ020000021.1 Protein Homology CDS 55207 55812 . - 0 ID=cds-HJH9165129.1;Parent=gene-O5D79_003715;Dbxref=NCBI_GP:HJH9165129.1;Name=HJH9165129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460046.1;locus_tag=O5D79_003715;product=TfoX/Sxy family DNA transformation protein;protein_id=HJH9165129.1;transl_table=11 DALFDJ020000021.1 tpg gene 56029 56538 . + . ID=gene-O5D79_003716;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=O5D79_003716 DALFDJ020000021.1 Protein Homology CDS 56029 56538 . + 0 ID=cds-HJH9165130.1;Parent=gene-O5D79_003716;Dbxref=NCBI_GP:HJH9165130.1;Name=HJH9165130.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460045.1;locus_tag=O5D79_003716;product=SOS-induced cell division inhibitor SulA;protein_id=HJH9165130.1;transl_table=11 DALFDJ020000021.1 tpg gene 56895 57947 . + . ID=gene-O5D79_003717;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=O5D79_003717 DALFDJ020000021.1 Protein Homology CDS 56895 57947 . + 0 ID=cds-HJH9165131.1;Parent=gene-O5D79_003717;Dbxref=NCBI_GP:HJH9165131.1;Name=HJH9165131.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460044.1;locus_tag=O5D79_003717;product=porin OmpA;protein_id=HJH9165131.1;transl_table=11 DALFDJ020000021.1 tpg gene 58019 58471 . - . ID=gene-O5D79_003718;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=O5D79_003718 DALFDJ020000021.1 Protein Homology CDS 58019 58471 . - 0 ID=cds-HJH9165132.1;Parent=gene-O5D79_003718;Dbxref=NCBI_GP:HJH9165132.1;Name=HJH9165132.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=O5D79_003718;product=macrodomain Ter protein MatP;protein_id=HJH9165132.1;transl_table=11 DALFDJ020000021.1 tpg gene 58657 60417 . + . ID=gene-O5D79_003719;Name=O5D79_003719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003719 DALFDJ020000021.1 Protein Homology CDS 58657 60417 . + 0 ID=cds-HJH9165133.1;Parent=gene-O5D79_003719;Dbxref=NCBI_GP:HJH9165133.1;Name=HJH9165133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460042.1;locus_tag=O5D79_003719;product=AAA family ATPase;protein_id=HJH9165133.1;transl_table=11 DALFDJ020000021.1 tpg gene 60486 61004 . + . ID=gene-O5D79_003720;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=O5D79_003720 DALFDJ020000021.1 Protein Homology CDS 60486 61004 . + 0 ID=cds-HJH9165134.1;Parent=gene-O5D79_003720;Dbxref=NCBI_GP:HJH9165134.1;Name=HJH9165134.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=O5D79_003720;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=HJH9165134.1;transl_table=11 DALFDJ020000021.1 tpg gene 61104 61271 . - . ID=gene-O5D79_003721;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=O5D79_003721 DALFDJ020000021.1 Protein Homology CDS 61104 61271 . - 0 ID=cds-HJH9165135.1;Parent=gene-O5D79_003721;Dbxref=NCBI_GP:HJH9165135.1;Name=HJH9165135.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460040.1;locus_tag=O5D79_003721;product=ribosome modulation factor;protein_id=HJH9165135.1;transl_table=11 DALFDJ020000021.1 tpg gene 61527 62090 . - . ID=gene-O5D79_003722;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=O5D79_003722 DALFDJ020000021.1 Protein Homology CDS 61527 62090 . - 0 ID=cds-HJH9165136.1;Parent=gene-O5D79_003722;Dbxref=NCBI_GP:HJH9165136.1;Name=HJH9165136.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460039.1;locus_tag=O5D79_003722;product=membrane integrity-associated transporter subunit PqiC;protein_id=HJH9165136.1;transl_table=11 DALFDJ020000021.1 tpg gene 62087 63727 . - . ID=gene-O5D79_003723;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=O5D79_003723 DALFDJ020000021.1 Protein Homology CDS 62087 63727 . - 0 ID=cds-HJH9165137.1;Parent=gene-O5D79_003723;Dbxref=NCBI_GP:HJH9165137.1;Name=HJH9165137.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=O5D79_003723;product=intermembrane transport protein PqiB;protein_id=HJH9165137.1;transl_table=11 DALFDJ020000021.1 tpg gene 63732 64985 . - . ID=gene-O5D79_003724;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=O5D79_003724 DALFDJ020000021.1 Protein Homology CDS 63732 64985 . - 0 ID=cds-HJH9165138.1;Parent=gene-O5D79_003724;Dbxref=NCBI_GP:HJH9165138.1;Name=HJH9165138.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460037.1;locus_tag=O5D79_003724;product=membrane integrity-associated transporter subunit PqiA;protein_id=HJH9165138.1;transl_table=11 DALFDJ020000021.1 tpg gene 65000 66907 . - . ID=gene-O5D79_003725;Name=O5D79_003725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003725 DALFDJ020000021.1 Protein Homology CDS 65000 66907 . - 0 ID=cds-HJH9165139.1;Parent=gene-O5D79_003725;Dbxref=NCBI_GP:HJH9165139.1;Name=HJH9165139.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=O5D79_003725;product=ABC transporter ATP-binding protein;protein_id=HJH9165139.1;transl_table=11 DALFDJ020000021.1 tpg gene 66920 69028 . - . ID=gene-O5D79_003726;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=O5D79_003726 DALFDJ020000021.1 Protein Homology CDS 66920 69028 . - 0 ID=cds-HJH9165140.1;Parent=gene-O5D79_003726;Dbxref=NCBI_GP:HJH9165140.1;Name=HJH9165140.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460035.1;locus_tag=O5D79_003726;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=HJH9165140.1;transl_table=11 DALFDJ020000021.1 tpg gene 69127 70236 . + . ID=gene-O5D79_003727;Name=O5D79_003727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003727 DALFDJ020000021.1 Protein Homology CDS 69127 70236 . + 0 ID=cds-HJH9165141.1;Parent=gene-O5D79_003727;Dbxref=NCBI_GP:HJH9165141.1;Name=HJH9165141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460034.1;locus_tag=O5D79_003727;product=YcbX family protein;protein_id=HJH9165141.1;transl_table=11 DALFDJ020000021.1 tpg gene 70233 70775 . - . ID=gene-O5D79_003728;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=O5D79_003728 DALFDJ020000021.1 Protein Homology CDS 70233 70775 . - 0 ID=cds-HJH9165142.1;Parent=gene-O5D79_003728;Dbxref=NCBI_GP:HJH9165142.1;Name=HJH9165142.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=O5D79_003728;product=cell division protein ZapC;protein_id=HJH9165142.1;transl_table=11 DALFDJ020000021.1 tpg gene 70941 71951 . - . ID=gene-O5D79_003729;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=O5D79_003729 DALFDJ020000021.1 Protein Homology CDS 70941 71951 . - 0 ID=cds-HJH9165143.1;Parent=gene-O5D79_003729;Dbxref=NCBI_GP:HJH9165143.1;Name=HJH9165143.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460032.1;locus_tag=O5D79_003729;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=HJH9165143.1;transl_table=11 DALFDJ020000021.1 tpg gene 72159 74771 . - . ID=gene-O5D79_003730;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=O5D79_003730 DALFDJ020000021.1 Protein Homology CDS 72159 74771 . - 0 ID=cds-HJH9165144.1;Parent=gene-O5D79_003730;Dbxref=NCBI_GP:HJH9165144.1;Name=HJH9165144.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=O5D79_003730;product=aminopeptidase N;protein_id=HJH9165144.1;transl_table=11 DALFDJ020000021.1 tpg gene 75038 76240 . + . ID=gene-O5D79_003731;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=O5D79_003731 DALFDJ020000021.1 Protein Homology CDS 75038 76240 . + 0 ID=cds-HJH9165145.1;Parent=gene-O5D79_003731;Dbxref=NCBI_GP:HJH9165145.1;Name=HJH9165145.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459979.1;locus_tag=O5D79_003731;product=nicotinate phosphoribosyltransferase;protein_id=HJH9165145.1;transl_table=11 DALFDJ020000021.1 tpg gene 76321 77754 . - . ID=gene-O5D79_003732;Name=O5D79_003732;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003732 DALFDJ020000021.1 Protein Homology CDS 76321 77754 . - 0 ID=cds-HJH9165146.1;Parent=gene-O5D79_003732;Dbxref=NCBI_GP:HJH9165146.1;Name=HJH9165146.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524705.1;locus_tag=O5D79_003732;product=alanine/glycine:cation symporter family protein;protein_id=HJH9165146.1;transl_table=11 DALFDJ020000021.1 tpg gene 78000 79214 . - . ID=gene-O5D79_003733;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=O5D79_003733 DALFDJ020000021.1 Protein Homology CDS 78000 79214 . - 0 ID=cds-HJH9165147.1;Parent=gene-O5D79_003733;Dbxref=NCBI_GP:HJH9165147.1;Name=HJH9165147.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459977.1;locus_tag=O5D79_003733;product=diaminopropionate ammonia-lyase;protein_id=HJH9165147.1;transl_table=11 DALFDJ020000021.1 tpg gene 79532 79993 . + . ID=gene-O5D79_003734;Name=O5D79_003734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003734 DALFDJ020000021.1 Protein Homology CDS 79532 79993 . + 0 ID=cds-HJH9165148.1;Parent=gene-O5D79_003734;Dbxref=NCBI_GP:HJH9165148.1;Name=HJH9165148.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459976.1;locus_tag=O5D79_003734;product=Lrp/AsnC family transcriptional regulator;protein_id=HJH9165148.1;transl_table=11 DALFDJ020000021.1 tpg gene 80194 81594 . + . ID=gene-O5D79_003735;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=O5D79_003735 DALFDJ020000021.1 Protein Homology CDS 80194 81594 . + 0 ID=cds-HJH9165149.1;Parent=gene-O5D79_003735;Dbxref=NCBI_GP:HJH9165149.1;Name=HJH9165149.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=O5D79_003735;product=asparagine--tRNA ligase;protein_id=HJH9165149.1;transl_table=11 DALFDJ020000021.1 tpg gene 82200 83291 . + . ID=gene-O5D79_003736;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=O5D79_003736 DALFDJ020000021.1 Protein Homology CDS 82200 83291 . + 0 ID=cds-HJH9165150.1;Parent=gene-O5D79_003736;Dbxref=NCBI_GP:HJH9165150.1;Name=HJH9165150.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459974.1;locus_tag=O5D79_003736;product=porin OmpF;protein_id=HJH9165150.1;transl_table=11 DALFDJ020000021.1 tpg gene 83476 84666 . + . ID=gene-O5D79_003737;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=O5D79_003737 DALFDJ020000021.1 Protein Homology CDS 83476 84666 . + 0 ID=cds-HJH9165151.1;Parent=gene-O5D79_003737;Dbxref=NCBI_GP:HJH9165151.1;Name=HJH9165151.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=O5D79_003737;product=aspartate transaminase;protein_id=HJH9165151.1;transl_table=11 DALFDJ020000021.1 tpg gene 84728 85375 . - . ID=gene-O5D79_003738;Name=O5D79_003738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003738 DALFDJ020000021.1 Protein Homology CDS 84728 85375 . - 0 ID=cds-HJH9165152.1;Parent=gene-O5D79_003738;Dbxref=NCBI_GP:HJH9165152.1;Name=HJH9165152.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=O5D79_003738;product=MBL fold metallo-hydrolase;protein_id=HJH9165152.1;transl_table=11 DALFDJ020000021.1 tpg gene 85403 85951 . - . ID=gene-O5D79_003739;Name=O5D79_003739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003739 DALFDJ020000021.1 Protein Homology CDS 85403 85951 . - 0 ID=cds-HJH9165153.1;Parent=gene-O5D79_003739;Dbxref=NCBI_GP:HJH9165153.1;Name=HJH9165153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459971.1;locus_tag=O5D79_003739;product=DUF882 domain-containing protein;protein_id=HJH9165153.1;transl_table=11 DALFDJ020000021.1 tpg gene 86211 88058 . - . ID=gene-O5D79_003740;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=O5D79_003740 DALFDJ020000021.1 Protein Homology CDS 86211 88058 . - 0 ID=cds-HJH9165154.1;Parent=gene-O5D79_003740;Dbxref=NCBI_GP:HJH9165154.1;Name=HJH9165154.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=O5D79_003740;product=L%2CD-transpeptidase;protein_id=HJH9165154.1;transl_table=11 DALFDJ020000021.1 tpg gene 88403 92869 . - . ID=gene-O5D79_003741;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=O5D79_003741 DALFDJ020000021.1 Protein Homology CDS 88403 92869 . - 0 ID=cds-HJH9165155.1;Parent=gene-O5D79_003741;Dbxref=NCBI_GP:HJH9165155.1;Name=HJH9165155.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459969.1;locus_tag=O5D79_003741;product=chromosome partition protein MukB;protein_id=HJH9165155.1;transl_table=11 DALFDJ020000021.1 tpg gene 92869 93573 . - . ID=gene-O5D79_003742;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=O5D79_003742 DALFDJ020000021.1 Protein Homology CDS 92869 93573 . - 0 ID=cds-HJH9165156.1;Parent=gene-O5D79_003742;Dbxref=NCBI_GP:HJH9165156.1;Name=HJH9165156.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=O5D79_003742;product=chromosome partition protein MukE;protein_id=HJH9165156.1;transl_table=11 DALFDJ020000021.1 tpg gene 93554 94876 . - . ID=gene-O5D79_003743;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=O5D79_003743 DALFDJ020000021.1 Protein Homology CDS 93554 94876 . - 0 ID=cds-HJH9165157.1;Parent=gene-O5D79_003743;Dbxref=NCBI_GP:HJH9165157.1;Name=HJH9165157.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=O5D79_003743;product=chromosome partition protein MukF;protein_id=HJH9165157.1;transl_table=11 DALFDJ020000021.1 tpg gene 94869 95672 . - . ID=gene-O5D79_003744;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=O5D79_003744 DALFDJ020000021.1 Protein Homology CDS 94869 95672 . - 0 ID=cds-HJH9165158.1;Parent=gene-O5D79_003744;Dbxref=NCBI_GP:HJH9165158.1;Name=HJH9165158.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459966.1;locus_tag=O5D79_003744;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=HJH9165158.1;transl_table=11 DALFDJ020000021.1 tpg gene 95808 96584 . + . ID=gene-O5D79_003745;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=O5D79_003745 DALFDJ020000021.1 Protein Homology CDS 95808 96584 . + 0 ID=cds-HJH9165159.1;Parent=gene-O5D79_003745;Dbxref=NCBI_GP:HJH9165159.1;Name=HJH9165159.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459965.1;locus_tag=O5D79_003745;product=envelope biogenesis factor ElyC;protein_id=HJH9165159.1;transl_table=11 DALFDJ020000021.1 tpg gene 96564 97457 . - . ID=gene-O5D79_003746;Name=O5D79_003746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003746 DALFDJ020000021.1 Protein Homology CDS 96564 97457 . - 0 ID=cds-HJH9165160.1;Parent=gene-O5D79_003746;Dbxref=NCBI_GP:HJH9165160.1;Name=HJH9165160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459964.1;locus_tag=O5D79_003746;product=YcbJ family phosphotransferase;protein_id=HJH9165160.1;transl_table=11 DALFDJ020000021.1 tpg gene 97668 98414 . - . ID=gene-O5D79_003747;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=O5D79_003747 DALFDJ020000021.1 Protein Homology CDS 97668 98414 . - 0 ID=cds-HJH9165161.1;Parent=gene-O5D79_003747;Dbxref=NCBI_GP:HJH9165161.1;Name=HJH9165161.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459963.1;locus_tag=O5D79_003747;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=HJH9165161.1;transl_table=11 DALFDJ020000021.1 tpg gene 98411 98593 . - . ID=gene-O5D79_003748;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=O5D79_003748 DALFDJ020000021.1 Protein Homology CDS 98411 98593 . - 0 ID=cds-HJH9165162.1;Parent=gene-O5D79_003748;Dbxref=NCBI_GP:HJH9165162.1;Name=HJH9165162.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459962.1;locus_tag=O5D79_003748;product=protein YcaR;protein_id=HJH9165162.1;transl_table=11 DALFDJ020000021.1 tpg gene 98645 99877 . - . ID=gene-O5D79_003749;Name=O5D79_003749;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003749 DALFDJ020000021.1 Protein Homology CDS 98645 99877 . - 0 ID=cds-HJH9165163.1;Parent=gene-O5D79_003749;Dbxref=NCBI_GP:HJH9165163.1;Name=HJH9165163.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459961.1;locus_tag=O5D79_003749;product=winged helix-turn-helix domain-containing protein;protein_id=HJH9165163.1;transl_table=11 DALFDJ020000021.1 tpg gene 99921 100898 . - . ID=gene-O5D79_003750;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=O5D79_003750 DALFDJ020000021.1 Protein Homology CDS 99921 100898 . - 0 ID=cds-HJH9165164.1;Parent=gene-O5D79_003750;Dbxref=NCBI_GP:HJH9165164.1;Name=HJH9165164.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459960.1;locus_tag=O5D79_003750;product=tetraacyldisaccharide 4'-kinase;protein_id=HJH9165164.1;transl_table=11 DALFDJ020000021.1 tpg gene 100895 102643 . - . ID=gene-O5D79_003751;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=O5D79_003751 DALFDJ020000021.1 Protein Homology CDS 100895 102643 . - 0 ID=cds-HJH9165165.1;Parent=gene-O5D79_003751;Dbxref=NCBI_GP:HJH9165165.1;Name=HJH9165165.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459959.1;locus_tag=O5D79_003751;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=HJH9165165.1;transl_table=11 DALFDJ020000021.1 tpg gene 102680 104944 . - . ID=gene-O5D79_003752;Name=O5D79_003752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003752 DALFDJ020000021.1 Protein Homology CDS 102680 104944 . - 0 ID=cds-HJH9165166.1;Parent=gene-O5D79_003752;Dbxref=NCBI_GP:HJH9165166.1;Name=HJH9165166.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459958.1;locus_tag=O5D79_003752;product=ComEC family protein;protein_id=HJH9165166.1;transl_table=11 ##sequence-region DALFDJ020000022.1 1 97241 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000022.1 tpg region 1 97241 . + . ID=DALFDJ020000022.1:1..97241;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000022.1 tpg gene 117 464 . - . ID=gene-O5D79_003753;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=O5D79_003753 DALFDJ020000022.1 Protein Homology CDS 117 464 . - 0 ID=cds-HJH9165167.1;Parent=gene-O5D79_003753;Dbxref=NCBI_GP:HJH9165167.1;Name=HJH9165167.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459406.1;locus_tag=O5D79_003753;product=HNH nuclease YajD;protein_id=HJH9165167.1;transl_table=11 DALFDJ020000022.1 tpg gene 634 1326 . - . ID=gene-O5D79_003754;Name=O5D79_003754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003754 DALFDJ020000022.1 Protein Homology CDS 634 1326 . - 0 ID=cds-HJH9165168.1;Parent=gene-O5D79_003754;Dbxref=NCBI_GP:HJH9165168.1;Name=HJH9165168.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459405.1;locus_tag=O5D79_003754;product=helix-turn-helix transcriptional regulator;protein_id=HJH9165168.1;transl_table=11 DALFDJ020000022.1 tpg gene 1352 1717 . - . ID=gene-O5D79_003755;Name=O5D79_003755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003755 DALFDJ020000022.1 Protein Homology CDS 1352 1717 . - 0 ID=cds-HJH9165169.1;Parent=gene-O5D79_003755;Dbxref=NCBI_GP:HJH9165169.1;Name=HJH9165169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459404.1;locus_tag=O5D79_003755;product=VOC family protein;protein_id=HJH9165169.1;transl_table=11 DALFDJ020000022.1 tpg gene 1865 2836 . - . ID=gene-O5D79_003756;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=O5D79_003756 DALFDJ020000022.1 Protein Homology CDS 1865 2836 . - 0 ID=cds-HJH9165170.1;Parent=gene-O5D79_003756;Dbxref=NCBI_GP:HJH9165170.1;Name=HJH9165170.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459403.1;locus_tag=O5D79_003756;product=protein translocase subunit SecF;protein_id=HJH9165170.1;transl_table=11 DALFDJ020000022.1 tpg gene 2847 4694 . - . ID=gene-O5D79_003757;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=O5D79_003757 DALFDJ020000022.1 Protein Homology CDS 2847 4694 . - 0 ID=cds-HJH9165171.1;Parent=gene-O5D79_003757;Dbxref=NCBI_GP:HJH9165171.1;Name=HJH9165171.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=O5D79_003757;product=protein translocase subunit SecD;protein_id=HJH9165171.1;transl_table=11 DALFDJ020000022.1 tpg gene 4722 5054 . - . ID=gene-O5D79_003758;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=O5D79_003758 DALFDJ020000022.1 Protein Homology CDS 4722 5054 . - 0 ID=cds-HJH9165172.1;Parent=gene-O5D79_003758;Dbxref=NCBI_GP:HJH9165172.1;Name=HJH9165172.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=O5D79_003758;product=preprotein translocase subunit YajC;protein_id=HJH9165172.1;transl_table=11 DALFDJ020000022.1 tpg gene 5077 6204 . - . ID=gene-O5D79_003759;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=O5D79_003759 DALFDJ020000022.1 Protein Homology CDS 5077 6204 . - 0 ID=cds-HJH9165173.1;Parent=gene-O5D79_003759;Dbxref=NCBI_GP:HJH9165173.1;Name=HJH9165173.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=O5D79_003759;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=HJH9165173.1;transl_table=11 DALFDJ020000022.1 tpg gene 6401 7465 . - . ID=gene-O5D79_003760;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=O5D79_003760 DALFDJ020000022.1 Protein Homology CDS 6401 7465 . - 0 ID=cds-HJH9165174.1;Parent=gene-O5D79_003760;Dbxref=NCBI_GP:HJH9165174.1;Name=HJH9165174.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459399.1;locus_tag=O5D79_003760;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=HJH9165174.1;transl_table=11 DALFDJ020000022.1 tpg gene 7559 8140 . + . ID=gene-O5D79_003761;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=O5D79_003761 DALFDJ020000022.1 Protein Homology CDS 7559 8140 . + 0 ID=cds-HJH9165175.1;Parent=gene-O5D79_003761;Dbxref=NCBI_GP:HJH9165175.1;Name=HJH9165175.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459398.1;locus_tag=O5D79_003761;product=ACP phosphodiesterase;protein_id=HJH9165175.1;transl_table=11 DALFDJ020000022.1 tpg gene 8350 8952 . + . ID=gene-O5D79_003762;Name=O5D79_003762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003762 DALFDJ020000022.1 Protein Homology CDS 8350 8952 . + 0 ID=cds-HJH9165176.1;Parent=gene-O5D79_003762;Dbxref=NCBI_GP:HJH9165176.1;Name=HJH9165176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459397.1;locus_tag=O5D79_003762;product=peroxiredoxin;protein_id=HJH9165176.1;transl_table=11 DALFDJ020000022.1 tpg gene 9024 10841 . - . ID=gene-O5D79_003763;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=O5D79_003763 DALFDJ020000022.1 Protein Homology CDS 9024 10841 . - 0 ID=cds-HJH9165177.1;Parent=gene-O5D79_003763;Dbxref=NCBI_GP:HJH9165177.1;Name=HJH9165177.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459396.1;locus_tag=O5D79_003763;product=maltodextrin glucosidase;protein_id=HJH9165177.1;transl_table=11 DALFDJ020000022.1 tpg gene 11003 12373 . - . ID=gene-O5D79_003764;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=O5D79_003764 DALFDJ020000022.1 Protein Homology CDS 11003 12373 . - 0 ID=cds-HJH9165178.1;Parent=gene-O5D79_003764;Dbxref=NCBI_GP:HJH9165178.1;Name=HJH9165178.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459395.1;locus_tag=O5D79_003764;product=proline-specific permease ProY;protein_id=HJH9165178.1;transl_table=11 DALFDJ020000022.1 tpg gene 12448 13767 . - . ID=gene-O5D79_003765;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=O5D79_003765 DALFDJ020000022.1 Protein Homology CDS 12448 13767 . - 0 ID=cds-HJH9165179.1;Parent=gene-O5D79_003765;Dbxref=NCBI_GP:HJH9165179.1;Name=HJH9165179.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459394.1;locus_tag=O5D79_003765;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=HJH9165179.1;transl_table=11 DALFDJ020000022.1 tpg gene 14176 15471 . - . ID=gene-O5D79_003766;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=O5D79_003766 DALFDJ020000022.1 Protein Homology CDS 14176 15471 . - 0 ID=cds-HJH9165180.1;Parent=gene-O5D79_003766;Dbxref=NCBI_GP:HJH9165180.1;Name=HJH9165180.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459393.1;locus_tag=O5D79_003766;product=phosphate regulon sensor histidine kinase PhoR;protein_id=HJH9165180.1;transl_table=11 DALFDJ020000022.1 tpg gene 15541 16230 . - . ID=gene-O5D79_003767;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=O5D79_003767 DALFDJ020000022.1 Protein Homology CDS 15541 16230 . - 0 ID=cds-HJH9165181.1;Parent=gene-O5D79_003767;Dbxref=NCBI_GP:HJH9165181.1;Name=HJH9165181.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=O5D79_003767;product=phosphate response regulator transcription factor PhoB;protein_id=HJH9165181.1;transl_table=11 DALFDJ020000022.1 tpg gene 16445 17647 . + . ID=gene-O5D79_003768;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=O5D79_003768 DALFDJ020000022.1 Protein Homology CDS 16445 17647 . + 0 ID=cds-HJH9165182.1;Parent=gene-O5D79_003768;Dbxref=NCBI_GP:HJH9165182.1;Name=HJH9165182.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459391.1;locus_tag=O5D79_003768;product=exonuclease subunit SbcD;protein_id=HJH9165182.1;transl_table=11 DALFDJ020000022.1 tpg gene 17644 20784 . + . ID=gene-O5D79_003769;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=O5D79_003769 DALFDJ020000022.1 Protein Homology CDS 17644 20784 . + 0 ID=cds-HJH9165183.1;Parent=gene-O5D79_003769;Dbxref=NCBI_GP:HJH9165183.1;Name=HJH9165183.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534028.1;locus_tag=O5D79_003769;product=exonuclease subunit SbcC;protein_id=HJH9165183.1;transl_table=11 DALFDJ020000022.1 tpg gene 20957 22129 . + . ID=gene-O5D79_003770;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=O5D79_003770 DALFDJ020000022.1 Protein Homology CDS 20957 22129 . + 0 ID=cds-HJH9165184.1;Parent=gene-O5D79_003770;Dbxref=NCBI_GP:HJH9165184.1;Name=HJH9165184.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459389.1;locus_tag=O5D79_003770;product=MFS transporter AraJ;protein_id=HJH9165184.1;transl_table=11 DALFDJ020000022.1 tpg gene 22149 23057 . - . ID=gene-O5D79_003771;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=O5D79_003771 DALFDJ020000022.1 Protein Homology CDS 22149 23057 . - 0 ID=cds-HJH9165185.1;Parent=gene-O5D79_003771;Dbxref=NCBI_GP:HJH9165185.1;Name=HJH9165185.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459388.1;locus_tag=O5D79_003771;product=fructokinase;protein_id=HJH9165185.1;transl_table=11 DALFDJ020000022.1 tpg gene 23183 24094 . + . ID=gene-O5D79_003772;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=O5D79_003772 DALFDJ020000022.1 Protein Homology CDS 23183 24094 . + 0 ID=cds-HJH9165186.1;Parent=gene-O5D79_003772;Dbxref=NCBI_GP:HJH9165186.1;Name=HJH9165186.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=O5D79_003772;product=recombination-associated protein RdgC;protein_id=HJH9165186.1;transl_table=11 DALFDJ020000022.1 tpg gene 24132 24416 . - . ID=gene-O5D79_003773;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=O5D79_003773 DALFDJ020000022.1 Protein Homology CDS 24132 24416 . - 0 ID=cds-HJH9165187.1;Parent=gene-O5D79_003773;Dbxref=NCBI_GP:HJH9165187.1;Name=HJH9165187.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459386.1;locus_tag=O5D79_003773;product=pyrimidine/purine nucleoside phosphorylase;protein_id=HJH9165187.1;transl_table=11 DALFDJ020000022.1 tpg gene 24487 25164 . - . ID=gene-O5D79_003774;Name=O5D79_003774;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003774 DALFDJ020000022.1 Protein Homology CDS 24487 25164 . - 0 ID=cds-HJH9165188.1;Parent=gene-O5D79_003774;Dbxref=NCBI_GP:HJH9165188.1;Name=HJH9165188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459385.1;locus_tag=O5D79_003774;product=AroM family protein;protein_id=HJH9165188.1;transl_table=11 DALFDJ020000022.1 tpg gene 25415 25606 . - . ID=gene-O5D79_003775;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=O5D79_003775 DALFDJ020000022.1 Protein Homology CDS 25415 25606 . - 0 ID=cds-HJH9165189.1;Parent=gene-O5D79_003775;Dbxref=NCBI_GP:HJH9165189.1;Name=HJH9165189.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=O5D79_003775;product=protein YaiA;protein_id=HJH9165189.1;transl_table=11 DALFDJ020000022.1 tpg gene 25633 26178 . - . ID=gene-O5D79_003776;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=O5D79_003776 DALFDJ020000022.1 Protein Homology CDS 25633 26178 . - 0 ID=cds-HJH9165190.1;Parent=gene-O5D79_003776;Dbxref=NCBI_GP:HJH9165190.1;Name=HJH9165190.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459383.1;locus_tag=O5D79_003776;product=shikimate kinase AroL;protein_id=HJH9165190.1;transl_table=11 DALFDJ020000022.1 tpg gene 26363 26818 . - . ID=gene-O5D79_003777;Name=O5D79_003777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003777 DALFDJ020000022.1 Protein Homology CDS 26363 26818 . - 0 ID=cds-HJH9165191.1;Parent=gene-O5D79_003777;Dbxref=NCBI_GP:HJH9165191.1;Name=HJH9165191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459382.1;locus_tag=O5D79_003777;product=YaiI/YqxD family protein;protein_id=HJH9165191.1;transl_table=11 DALFDJ020000022.1 tpg gene 26958 27767 . + . ID=gene-O5D79_003778;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=O5D79_003778 DALFDJ020000022.1 Protein Homology CDS 26958 27767 . + 0 ID=cds-HJH9165192.1;Parent=gene-O5D79_003778;Dbxref=NCBI_GP:HJH9165192.1;Name=HJH9165192.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459381.1;locus_tag=O5D79_003778;product=pyrroline-5-carboxylate reductase;protein_id=HJH9165192.1;transl_table=11 DALFDJ020000022.1 tpg gene 27782 28894 . - . ID=gene-O5D79_003779;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=O5D79_003779 DALFDJ020000022.1 Protein Homology CDS 27782 28894 . - 0 ID=cds-HJH9165193.1;Parent=gene-O5D79_003779;Dbxref=NCBI_GP:HJH9165193.1;Name=HJH9165193.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459380.1;locus_tag=O5D79_003779;product=diguanylate cyclase AdrA;protein_id=HJH9165193.1;transl_table=11 DALFDJ020000022.1 tpg gene 28986 29306 . - . ID=gene-O5D79_003780;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=O5D79_003780 DALFDJ020000022.1 Protein Homology CDS 28986 29306 . - 0 ID=cds-HJH9165194.1;Parent=gene-O5D79_003780;Dbxref=NCBI_GP:HJH9165194.1;Name=HJH9165194.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459379.1;locus_tag=O5D79_003780;product=phosphate starvation-inducible protein PsiF;protein_id=HJH9165194.1;transl_table=11 DALFDJ020000022.1 tpg gene 29659 29919 . - . ID=gene-O5D79_003781;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=O5D79_003781 DALFDJ020000022.1 Protein Homology CDS 29659 29919 . - 0 ID=cds-HJH9165195.1;Parent=gene-O5D79_003781;Dbxref=NCBI_GP:HJH9165195.1;Name=HJH9165195.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748986.1;locus_tag=O5D79_003781;product=anti-adapter protein IraP;protein_id=HJH9165195.1;transl_table=11 DALFDJ020000022.1 tpg gene 30216 31427 . - . ID=gene-O5D79_003782;Name=O5D79_003782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003782 DALFDJ020000022.1 Protein Homology CDS 30216 31427 . - 0 ID=cds-HJH9165196.1;Parent=gene-O5D79_003782;Dbxref=NCBI_GP:HJH9165196.1;Name=HJH9165196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459377.1;locus_tag=O5D79_003782;product=multidrug efflux MFS transporter;protein_id=HJH9165196.1;transl_table=11 DALFDJ020000022.1 tpg gene 31596 32309 . - . ID=gene-O5D79_003783;Name=O5D79_003783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003783 DALFDJ020000022.1 Protein Homology CDS 31596 32309 . - 0 ID=cds-HJH9165197.1;Parent=gene-O5D79_003783;Dbxref=NCBI_GP:HJH9165197.1;Name=HJH9165197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459376.1;locus_tag=O5D79_003783;product=extensin family protein;protein_id=HJH9165197.1;transl_table=11 DALFDJ020000022.1 tpg gene 32387 33481 . + . ID=gene-O5D79_003784;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=O5D79_003784 DALFDJ020000022.1 Protein Homology CDS 32387 33481 . + 0 ID=cds-HJH9165198.1;Parent=gene-O5D79_003784;Dbxref=NCBI_GP:HJH9165198.1;Name=HJH9165198.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459375.1;locus_tag=O5D79_003784;product=D-alanine--D-alanine ligase;protein_id=HJH9165198.1;transl_table=11 DALFDJ020000022.1 tpg gene 33507 33722 . - . ID=gene-O5D79_003785;Name=O5D79_003785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003785 DALFDJ020000022.1 Protein Homology CDS 33507 33722 . - 0 ID=cds-HJH9165199.1;Parent=gene-O5D79_003785;Dbxref=NCBI_GP:HJH9165199.1;Name=HJH9165199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459374.1;locus_tag=O5D79_003785;product=DUF2754 family protein;protein_id=HJH9165199.1;transl_table=11 DALFDJ020000022.1 tpg gene 33990 34298 . + . ID=gene-O5D79_003786;Name=O5D79_003786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003786 DALFDJ020000022.1 Protein Homology CDS 33990 34298 . + 0 ID=cds-HJH9165200.1;Parent=gene-O5D79_003786;Dbxref=NCBI_GP:HJH9165200.1;Name=HJH9165200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459373.1;locus_tag=O5D79_003786;product=YaiY family protein;protein_id=HJH9165200.1;transl_table=11 DALFDJ020000022.1 tpg gene 34336 35430 . - . ID=gene-O5D79_003787;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=O5D79_003787 DALFDJ020000022.1 Protein Homology CDS 34336 35430 . - 0 ID=cds-HJH9165201.1;Parent=gene-O5D79_003787;Dbxref=NCBI_GP:HJH9165201.1;Name=HJH9165201.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459372.1;locus_tag=O5D79_003787;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=HJH9165201.1;transl_table=11 DALFDJ020000022.1 tpg gene 35445 36665 . - . ID=gene-O5D79_003788;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=O5D79_003788 DALFDJ020000022.1 Protein Homology CDS 35445 36665 . - 0 ID=cds-HJH9165202.1;Parent=gene-O5D79_003788;Dbxref=NCBI_GP:HJH9165202.1;Name=HJH9165202.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459371.1;locus_tag=O5D79_003788;product=peptide antibiotic transporter SbmA;protein_id=HJH9165202.1;transl_table=11 DALFDJ020000022.1 tpg gene 37012 38169 . + . ID=gene-O5D79_003789;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=O5D79_003789 DALFDJ020000022.1 Protein Homology CDS 37012 38169 . + 0 ID=cds-HJH9165203.1;Parent=gene-O5D79_003789;Dbxref=NCBI_GP:HJH9165203.1;Name=HJH9165203.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=O5D79_003789;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=HJH9165203.1;transl_table=11 DALFDJ020000022.1 tpg gene 38214 38837 . - . ID=gene-O5D79_003790;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=O5D79_003790 DALFDJ020000022.1 Protein Homology CDS 38214 38837 . - 0 ID=cds-HJH9165204.1;Parent=gene-O5D79_003790;Dbxref=NCBI_GP:HJH9165204.1;Name=HJH9165204.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459369.1;locus_tag=O5D79_003790;product=hydrogen peroxide resistance inhibitor IprA;protein_id=HJH9165204.1;transl_table=11 DALFDJ020000022.1 tpg gene 38922 41933 . - . ID=gene-O5D79_003791;Name=ehaB;gbkey=Gene;gene=ehaB;gene_biotype=protein_coding;locus_tag=O5D79_003791 DALFDJ020000022.1 Protein Homology CDS 38922 41933 . - 0 ID=cds-HJH9165205.1;Parent=gene-O5D79_003791;Dbxref=NCBI_GP:HJH9165205.1;Name=HJH9165205.1;gbkey=CDS;gene=ehaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000556401.1;locus_tag=O5D79_003791;product=autotransporter adhesin EhaB;protein_id=HJH9165205.1;transl_table=11 DALFDJ020000022.1 tpg gene 42446 43420 . + . ID=gene-O5D79_003792;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=O5D79_003792 DALFDJ020000022.1 Protein Homology CDS 42446 43420 . + 0 ID=cds-HJH9165206.1;Parent=gene-O5D79_003792;Dbxref=NCBI_GP:HJH9165206.1;Name=HJH9165206.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459367.1;locus_tag=O5D79_003792;product=porphobilinogen synthase;protein_id=HJH9165206.1;transl_table=11 DALFDJ020000022.1 tpg gene 43524 45410 . - . ID=gene-O5D79_003793;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=O5D79_003793 DALFDJ020000022.1 Protein Homology CDS 43524 45410 . - 0 ID=cds-HJH9165207.1;Parent=gene-O5D79_003793;Dbxref=NCBI_GP:HJH9165207.1;Name=HJH9165207.1;Ontology_term=GO:0019629,GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459366.1;locus_tag=O5D79_003793;product=propionate--CoA ligase;protein_id=HJH9165207.1;transl_table=11 DALFDJ020000022.1 tpg gene 45451 46902 . - . ID=gene-O5D79_003794;Name=O5D79_003794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003794 DALFDJ020000022.1 Protein Homology CDS 45451 46902 . - 0 ID=cds-HJH9165208.1;Parent=gene-O5D79_003794;Dbxref=NCBI_GP:HJH9165208.1;Name=HJH9165208.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459365.1;locus_tag=O5D79_003794;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=HJH9165208.1;transl_table=11 DALFDJ020000022.1 tpg gene 46942 48111 . - . ID=gene-O5D79_003795;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=O5D79_003795 DALFDJ020000022.1 Protein Homology CDS 46942 48111 . - 0 ID=cds-HJH9165209.1;Parent=gene-O5D79_003795;Dbxref=NCBI_GP:HJH9165209.1;Name=HJH9165209.1;Ontology_term=GO:0019679,GO:0004108,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate (Si)-synthase activity|0004108||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459364.1;locus_tag=O5D79_003795;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=HJH9165209.1;transl_table=11 DALFDJ020000022.1 tpg gene 48234 49121 . - . ID=gene-O5D79_003796;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=O5D79_003796 DALFDJ020000022.1 Protein Homology CDS 48234 49121 . - 0 ID=cds-HJH9165210.1;Parent=gene-O5D79_003796;Dbxref=NCBI_GP:HJH9165210.1;Name=HJH9165210.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459363.1;locus_tag=O5D79_003796;product=methylisocitrate lyase;protein_id=HJH9165210.1;transl_table=11 DALFDJ020000022.1 tpg gene 49387 51012 . + . ID=gene-O5D79_003797;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=O5D79_003797 DALFDJ020000022.1 Protein Homology CDS 49387 51012 . + 0 ID=cds-HJH9165211.1;Parent=gene-O5D79_003797;Dbxref=NCBI_GP:HJH9165211.1;Name=HJH9165211.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459362.1;locus_tag=O5D79_003797;product=propionate catabolism operon regulatory protein PrpR;protein_id=HJH9165211.1;transl_table=11 DALFDJ020000022.1 tpg gene 51148 51423 . - . ID=gene-O5D79_003798;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=O5D79_003798 DALFDJ020000022.1 Protein Homology CDS 51148 51423 . - 0 ID=cds-HJH9165212.1;Parent=gene-O5D79_003798;Dbxref=NCBI_GP:HJH9165212.1;Name=HJH9165212.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459361.1;locus_tag=O5D79_003798;product=DUF1471 family periplasmic protein YahO;protein_id=HJH9165212.1;transl_table=11 DALFDJ020000022.1 tpg gene 51655 52287 . + . ID=gene-O5D79_003799;Name=O5D79_003799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003799 DALFDJ020000022.1 Protein Homology CDS 51655 52287 . + 0 ID=cds-HJH9165213.1;Parent=gene-O5D79_003799;Dbxref=NCBI_GP:HJH9165213.1;Name=HJH9165213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459360.1;locus_tag=O5D79_003799;product=LysE family transporter;protein_id=HJH9165213.1;transl_table=11 DALFDJ020000022.1 tpg gene 52328 54436 . - . ID=gene-O5D79_003800;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=O5D79_003800 DALFDJ020000022.1 Protein Homology CDS 52328 54436 . - 0 ID=cds-HJH9165214.1;Parent=gene-O5D79_003800;Dbxref=NCBI_GP:HJH9165214.1;Name=HJH9165214.1;Ontology_term=GO:0015344,GO:0038023;gbkey=CDS;gene=foxA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=O5D79_003800;product=ferrioxamine B receptor FoxA;protein_id=HJH9165214.1;transl_table=11 DALFDJ020000022.1 tpg gene 54582 55586 . - . ID=gene-O5D79_003801;Name=foxR;gbkey=Gene;gene=foxR;gene_biotype=protein_coding;locus_tag=O5D79_003801 DALFDJ020000022.1 Protein Homology CDS 54582 55586 . - 0 ID=cds-HJH9165215.1;Parent=gene-O5D79_003801;Dbxref=NCBI_GP:HJH9165215.1;Name=HJH9165215.1;gbkey=CDS;gene=foxR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459358.1;locus_tag=O5D79_003801;product=ferrioxamine uptake transcriptional regulator FoxR;protein_id=HJH9165215.1;transl_table=11 DALFDJ020000022.1 tpg pseudogene 55682 55874 . - . ID=gene-O5D79_003802;Name=O5D79_003802;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003802;pseudo=true DALFDJ020000022.1 Protein Homology CDS 55682 55874 . - 0 ID=cds-O5D79_003802;Parent=gene-O5D79_003802;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459357.3;locus_tag=O5D79_003802;product=hypothetical protein;pseudo=true;transl_table=11 DALFDJ020000022.1 tpg gene 55793 55978 . - . ID=gene-O5D79_003803;Name=O5D79_003803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003803 DALFDJ020000022.1 Protein Homology CDS 55793 55978 . - 0 ID=cds-HJH9165216.1;Parent=gene-O5D79_003803;Dbxref=NCBI_GP:HJH9165216.1;Name=HJH9165216.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022085.6;locus_tag=O5D79_003803;product=DUF2474 domain-containing protein;protein_id=HJH9165216.1;transl_table=11 DALFDJ020000022.1 tpg gene 55924 56934 . - . ID=gene-O5D79_003804;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=O5D79_003804 DALFDJ020000022.1 Protein Homology CDS 55924 56934 . - 0 ID=cds-HJH9165217.1;Parent=gene-O5D79_003804;Dbxref=NCBI_GP:HJH9165217.1;Name=HJH9165217.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459356.1;locus_tag=O5D79_003804;product=cytochrome d ubiquinol oxidase subunit II;protein_id=HJH9165217.1;transl_table=11 DALFDJ020000022.1 tpg gene 56931 58334 . - . ID=gene-O5D79_003805;Name=O5D79_003805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003805 DALFDJ020000022.1 Protein Homology CDS 56931 58334 . - 0 ID=cds-HJH9165218.1;Parent=gene-O5D79_003805;Dbxref=NCBI_GP:HJH9165218.1;Name=HJH9165218.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459355.1;locus_tag=O5D79_003805;product=cytochrome ubiquinol oxidase subunit I;protein_id=HJH9165218.1;transl_table=11 DALFDJ020000022.1 tpg gene 58451 58552 . - . ID=gene-O5D79_003806;Name=ssaA;gbkey=Gene;gene=ssaA;gene_biotype=protein_coding;locus_tag=O5D79_003806 DALFDJ020000022.1 Protein Homology CDS 58451 58552 . - 0 ID=cds-HJH9165219.1;Parent=gene-O5D79_003806;Dbxref=NCBI_GP:HJH9165219.1;Name=HJH9165219.1;gbkey=CDS;gene=ssaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459354.1;locus_tag=O5D79_003806;product=small effector SsaA;protein_id=HJH9165219.1;transl_table=11 DALFDJ020000022.1 tpg gene 58829 61801 . - . ID=gene-O5D79_003807;Name=O5D79_003807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003807 DALFDJ020000022.1 Protein Homology CDS 58829 61801 . - 0 ID=cds-HJH9165220.1;Parent=gene-O5D79_003807;Dbxref=NCBI_GP:HJH9165220.1;Name=HJH9165220.1;Ontology_term=GO:0003677,GO:0016788;gbkey=CDS;go_function=DNA binding|0003677||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459353.3;locus_tag=O5D79_003807;product=type III restriction-modification system endonuclease;protein_id=HJH9165220.1;transl_table=11 DALFDJ020000022.1 tpg gene 61811 63769 . - . ID=gene-O5D79_003808;Name=O5D79_003808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003808 DALFDJ020000022.1 Protein Homology CDS 61811 63769 . - 0 ID=cds-HJH9165221.1;Parent=gene-O5D79_003808;Dbxref=NCBI_GP:HJH9165221.1;Name=HJH9165221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459352.1;locus_tag=O5D79_003808;product=site-specific DNA-methyltransferase;protein_id=HJH9165221.1;transl_table=11 DALFDJ020000022.1 tpg gene 63958 65211 . - . ID=gene-O5D79_003809;Name=O5D79_003809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003809 DALFDJ020000022.1 Protein Homology CDS 63958 65211 . - 0 ID=cds-HJH9165222.1;Parent=gene-O5D79_003809;Dbxref=NCBI_GP:HJH9165222.1;Name=HJH9165222.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459351.1;locus_tag=O5D79_003809;product=MFS transporter;protein_id=HJH9165222.1;transl_table=11 DALFDJ020000022.1 tpg gene 65503 65697 . - . ID=gene-O5D79_003810;Name=golB;gbkey=Gene;gene=golB;gene_biotype=protein_coding;locus_tag=O5D79_003810 DALFDJ020000022.1 Protein Homology CDS 65503 65697 . - 0 ID=cds-HJH9165223.1;Parent=gene-O5D79_003810;Dbxref=NCBI_GP:HJH9165223.1;Name=HJH9165223.1;gbkey=CDS;gene=golB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459350.1;locus_tag=O5D79_003810;product=gold resistance metallochaperone GolB;protein_id=HJH9165223.1;transl_table=11 DALFDJ020000022.1 tpg gene 65775 66239 . - . ID=gene-O5D79_003811;Name=golS;gbkey=Gene;gene=golS;gene_biotype=protein_coding;locus_tag=O5D79_003811 DALFDJ020000022.1 Protein Homology CDS 65775 66239 . - 0 ID=cds-HJH9165224.1;Parent=gene-O5D79_003811;Dbxref=NCBI_GP:HJH9165224.1;Name=HJH9165224.1;gbkey=CDS;gene=golS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459349.1;locus_tag=O5D79_003811;product=Au(I) sensor transcriptional regulator GolS;protein_id=HJH9165224.1;transl_table=11 DALFDJ020000022.1 tpg gene 66251 68539 . - . ID=gene-O5D79_003812;Name=golT;gbkey=Gene;gene=golT;gene_biotype=protein_coding;locus_tag=O5D79_003812 DALFDJ020000022.1 Protein Homology CDS 66251 68539 . - 0 ID=cds-HJH9165225.1;Parent=gene-O5D79_003812;Dbxref=NCBI_GP:HJH9165225.1;Name=HJH9165225.1;gbkey=CDS;gene=golT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083318.1;locus_tag=O5D79_003812;product=gold/copper-translocating P-type ATPase GolT;protein_id=HJH9165225.1;transl_table=11 DALFDJ020000022.1 tpg gene 68816 70042 . + . ID=gene-O5D79_003813;Name=mdsA;gbkey=Gene;gene=mdsA;gene_biotype=protein_coding;locus_tag=O5D79_003813 DALFDJ020000022.1 Protein Homology CDS 68816 70042 . + 0 ID=cds-HJH9165226.1;Parent=gene-O5D79_003813;Dbxref=NCBI_GP:HJH9165226.1;Name=HJH9165226.1;gbkey=CDS;gene=mdsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459347.3;locus_tag=O5D79_003813;product=multidrug efflux RND transporter periplasmic adaptor subunit MdsA;protein_id=HJH9165226.1;transl_table=11 DALFDJ020000022.1 tpg gene 70039 73206 . + . ID=gene-O5D79_003814;Name=mdsB;gbkey=Gene;gene=mdsB;gene_biotype=protein_coding;locus_tag=O5D79_003814 DALFDJ020000022.1 Protein Homology CDS 70039 73206 . + 0 ID=cds-HJH9165227.1;Parent=gene-O5D79_003814;Dbxref=NCBI_GP:HJH9165227.1;Name=HJH9165227.1;gbkey=CDS;gene=mdsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459346.1;locus_tag=O5D79_003814;product=multidrug efflux RND transporter permease subunit MdsB;protein_id=HJH9165227.1;transl_table=11 DALFDJ020000022.1 tpg gene 73223 74680 . + . ID=gene-O5D79_003815;Name=mdsC;gbkey=Gene;gene=mdsC;gene_biotype=protein_coding;locus_tag=O5D79_003815 DALFDJ020000022.1 Protein Homology CDS 73223 74680 . + 0 ID=cds-HJH9165228.1;Parent=gene-O5D79_003815;Dbxref=NCBI_GP:HJH9165228.1;Name=HJH9165228.1;gbkey=CDS;gene=mdsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521068.1;locus_tag=O5D79_003815;product=multidrug efflux transporter outer membrane subunit MdsC;protein_id=HJH9165228.1;transl_table=11 DALFDJ020000022.1 tpg gene 74750 75109 . - . ID=gene-O5D79_003816;Name=O5D79_003816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003816 DALFDJ020000022.1 Protein Homology CDS 74750 75109 . - 0 ID=cds-HJH9165229.1;Parent=gene-O5D79_003816;Dbxref=NCBI_GP:HJH9165229.1;Name=HJH9165229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459344.1;locus_tag=O5D79_003816;product=DUF4156 domain-containing protein;protein_id=HJH9165229.1;transl_table=11 DALFDJ020000022.1 tpg gene 75167 75391 . - . ID=gene-O5D79_003817;Name=O5D79_003817;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003817 DALFDJ020000022.1 Protein Homology CDS 75167 75391 . - 0 ID=cds-HJH9165230.1;Parent=gene-O5D79_003817;Dbxref=NCBI_GP:HJH9165230.1;Name=HJH9165230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459343.1;locus_tag=O5D79_003817;product=hypothetical protein;protein_id=HJH9165230.1;transl_table=11 DALFDJ020000022.1 tpg gene 75402 76043 . - . ID=gene-O5D79_003818;Name=O5D79_003818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003818 DALFDJ020000022.1 Protein Homology CDS 75402 76043 . - 0 ID=cds-HJH9165231.1;Parent=gene-O5D79_003818;Dbxref=NCBI_GP:HJH9165231.1;Name=HJH9165231.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459342.1;locus_tag=O5D79_003818;product=helix-turn-helix transcriptional regulator;protein_id=HJH9165231.1;transl_table=11 DALFDJ020000022.1 tpg gene 76187 76711 . - . ID=gene-O5D79_003819;Name=O5D79_003819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003819 DALFDJ020000022.1 Protein Homology CDS 76187 76711 . - 0 ID=cds-HJH9165232.1;Parent=gene-O5D79_003819;Dbxref=NCBI_GP:HJH9165232.1;Name=HJH9165232.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459341.1;locus_tag=O5D79_003819;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=HJH9165232.1;transl_table=11 DALFDJ020000022.1 tpg gene 77113 77601 . - . ID=gene-O5D79_003820;Name=O5D79_003820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003820 DALFDJ020000022.1 Protein Homology CDS 77113 77601 . - 0 ID=cds-HJH9165233.1;Parent=gene-O5D79_003820;Dbxref=NCBI_GP:HJH9165233.1;Name=HJH9165233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459340.1;locus_tag=O5D79_003820;product=hypothetical protein;protein_id=HJH9165233.1;transl_table=11 DALFDJ020000022.1 tpg gene 77574 78317 . - . ID=gene-O5D79_003821;Name=O5D79_003821;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003821 DALFDJ020000022.1 Protein Homology CDS 77574 78317 . - 0 ID=cds-HJH9165234.1;Parent=gene-O5D79_003821;Dbxref=NCBI_GP:HJH9165234.1;Name=HJH9165234.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459339.1;locus_tag=O5D79_003821;product=winged helix-turn-helix domain-containing protein;protein_id=HJH9165234.1;transl_table=11 DALFDJ020000022.1 tpg pseudogene 78417 79991 . - . ID=gene-O5D79_003822;Name=O5D79_003822;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003822;pseudo=true DALFDJ020000022.1 Protein Homology CDS 78417 79991 . - 0 ID=cds-O5D79_003822;Parent=gene-O5D79_003822;Note=internal stop;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459338.1;locus_tag=O5D79_003822;product=EAL domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000022.1 tpg pseudogene 80493 80793 . - . ID=gene-O5D79_003823;Name=O5D79_003823;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003823;pseudo=true DALFDJ020000022.1 Protein Homology CDS 80493 80793 . - 0 ID=cds-O5D79_003823;Parent=gene-O5D79_003823;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459337.1;locus_tag=O5D79_003823;product=hypothetical protein;pseudo=true;transl_table=11 DALFDJ020000022.1 tpg gene 80766 81500 . - . ID=gene-O5D79_003824;Name=O5D79_003824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003824 DALFDJ020000022.1 Protein Homology CDS 80766 81500 . - 0 ID=cds-HJH9165235.1;Parent=gene-O5D79_003824;Dbxref=NCBI_GP:HJH9165235.1;Name=HJH9165235.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005860.1;locus_tag=O5D79_003824;product=winged helix-turn-helix domain-containing protein;protein_id=HJH9165235.1;transl_table=11 DALFDJ020000022.1 tpg gene 82164 82700 . + . ID=gene-O5D79_003825;Name=O5D79_003825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003825 DALFDJ020000022.1 Protein Homology CDS 82164 82700 . + 0 ID=cds-HJH9165236.1;Parent=gene-O5D79_003825;Dbxref=NCBI_GP:HJH9165236.1;Name=HJH9165236.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459335.1;locus_tag=O5D79_003825;product=fimbrial protein;protein_id=HJH9165236.1;transl_table=11 DALFDJ020000022.1 tpg gene 82762 83523 . + . ID=gene-O5D79_003826;Name=stbB;gbkey=Gene;gene=stbB;gene_biotype=protein_coding;locus_tag=O5D79_003826 DALFDJ020000022.1 Protein Homology CDS 82762 83523 . + 0 ID=cds-HJH9165237.1;Parent=gene-O5D79_003826;Dbxref=NCBI_GP:HJH9165237.1;Name=HJH9165237.1;gbkey=CDS;gene=stbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459334.1;locus_tag=O5D79_003826;product=fimbrial biogenesis chaperone StbB;protein_id=HJH9165237.1;transl_table=11 DALFDJ020000022.1 tpg gene 83507 86068 . + . ID=gene-O5D79_003827;Name=O5D79_003827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003827 DALFDJ020000022.1 Protein Homology CDS 83507 86068 . + 0 ID=cds-HJH9165238.1;Parent=gene-O5D79_003827;Dbxref=NCBI_GP:HJH9165238.1;Name=HJH9165238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459333.1;locus_tag=O5D79_003827;product=fimbrial outer membrane usher protein;protein_id=HJH9165238.1;transl_table=11 DALFDJ020000022.1 tpg gene 86073 87398 . + . ID=gene-O5D79_003828;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=O5D79_003828 DALFDJ020000022.1 Protein Homology CDS 86073 87398 . + 0 ID=cds-HJH9165239.1;Parent=gene-O5D79_003828;Dbxref=NCBI_GP:HJH9165239.1;Name=HJH9165239.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459332.1;locus_tag=O5D79_003828;product=fimbrial usher protein StbD;protein_id=HJH9165239.1;transl_table=11 DALFDJ020000022.1 tpg gene 87364 88122 . + . ID=gene-O5D79_003829;Name=stbE;gbkey=Gene;gene=stbE;gene_biotype=protein_coding;locus_tag=O5D79_003829 DALFDJ020000022.1 Protein Homology CDS 87364 88122 . + 0 ID=cds-HJH9165240.1;Parent=gene-O5D79_003829;Dbxref=NCBI_GP:HJH9165240.1;Name=HJH9165240.1;gbkey=CDS;gene=stbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459331.1;locus_tag=O5D79_003829;product=fimbrial biogenesis chaperone StbE;protein_id=HJH9165240.1;transl_table=11 DALFDJ020000022.1 tpg gene 88170 88568 . - . ID=gene-O5D79_003830;Name=O5D79_003830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003830 DALFDJ020000022.1 Protein Homology CDS 88170 88568 . - 0 ID=cds-HJH9165241.1;Parent=gene-O5D79_003830;Dbxref=NCBI_GP:HJH9165241.1;Name=HJH9165241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459330.1;locus_tag=O5D79_003830;product=hypothetical protein;protein_id=HJH9165241.1;transl_table=11 DALFDJ020000022.1 tpg gene 89260 89532 . + . ID=gene-O5D79_003831;Name=O5D79_003831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003831 DALFDJ020000022.1 Protein Homology CDS 89260 89532 . + 0 ID=cds-HJH9165242.1;Parent=gene-O5D79_003831;Dbxref=NCBI_GP:HJH9165242.1;Name=HJH9165242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459329.1;locus_tag=O5D79_003831;product=cytoplasmic protein;protein_id=HJH9165242.1;transl_table=11 DALFDJ020000022.1 tpg gene 89477 90442 . - . ID=gene-O5D79_003832;Name=O5D79_003832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003832 DALFDJ020000022.1 Protein Homology CDS 89477 90442 . - 0 ID=cds-HJH9165243.1;Parent=gene-O5D79_003832;Dbxref=NCBI_GP:HJH9165243.1;Name=HJH9165243.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459328.1;locus_tag=O5D79_003832;product=LysR family transcriptional regulator;protein_id=HJH9165243.1;transl_table=11 DALFDJ020000022.1 tpg gene 90476 91390 . - . ID=gene-O5D79_003833;Name=O5D79_003833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003833 DALFDJ020000022.1 Protein Homology CDS 90476 91390 . - 0 ID=cds-HJH9165244.1;Parent=gene-O5D79_003833;Dbxref=NCBI_GP:HJH9165244.1;Name=HJH9165244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459327.1;locus_tag=O5D79_003833;product=alpha/beta fold hydrolase;protein_id=HJH9165244.1;transl_table=11 DALFDJ020000022.1 tpg gene 91390 92268 . - . ID=gene-O5D79_003834;Name=O5D79_003834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003834 DALFDJ020000022.1 Protein Homology CDS 91390 92268 . - 0 ID=cds-HJH9165245.1;Parent=gene-O5D79_003834;Dbxref=NCBI_GP:HJH9165245.1;Name=HJH9165245.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459326.1;locus_tag=O5D79_003834;product=fumarylacetoacetate hydrolase family protein;protein_id=HJH9165245.1;transl_table=11 DALFDJ020000022.1 tpg gene 92283 92909 . - . ID=gene-O5D79_003835;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=O5D79_003835 DALFDJ020000022.1 Protein Homology CDS 92283 92909 . - 0 ID=cds-HJH9165246.1;Parent=gene-O5D79_003835;Dbxref=NCBI_GP:HJH9165246.1;Name=HJH9165246.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459325.1;locus_tag=O5D79_003835;product=3-isopropylmalate dehydratase small subunit;protein_id=HJH9165246.1;transl_table=11 DALFDJ020000022.1 tpg gene 92911 94332 . - . ID=gene-O5D79_003836;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=O5D79_003836 DALFDJ020000022.1 Protein Homology CDS 92911 94332 . - 0 ID=cds-HJH9165247.1;Parent=gene-O5D79_003836;Dbxref=NCBI_GP:HJH9165247.1;Name=HJH9165247.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459324.1;locus_tag=O5D79_003836;product=3-isopropylmalate dehydratase large subunit;protein_id=HJH9165247.1;transl_table=11 DALFDJ020000022.1 tpg gene 94464 95702 . - . ID=gene-O5D79_003837;Name=O5D79_003837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003837 DALFDJ020000022.1 Protein Homology CDS 94464 95702 . - 0 ID=cds-HJH9165248.1;Parent=gene-O5D79_003837;Dbxref=NCBI_GP:HJH9165248.1;Name=HJH9165248.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459323.3;locus_tag=O5D79_003837;product=MFS transporter;protein_id=HJH9165248.1;transl_table=11 DALFDJ020000022.1 tpg gene 96043 96366 . - . ID=gene-O5D79_003838;Name=O5D79_003838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003838 DALFDJ020000022.1 Protein Homology CDS 96043 96366 . - 0 ID=cds-HJH9165249.1;Parent=gene-O5D79_003838;Dbxref=NCBI_GP:HJH9165249.1;Name=HJH9165249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459322.1;locus_tag=O5D79_003838;product=DUF1889 family protein;protein_id=HJH9165249.1;transl_table=11 DALFDJ020000022.1 tpg gene 96476 96604 . - . ID=gene-O5D79_003839;Name=O5D79_003839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003839 DALFDJ020000022.1 Protein Homology CDS 96476 96604 . - 0 ID=cds-HJH9165250.1;Parent=gene-O5D79_003839;Dbxref=NCBI_GP:HJH9165250.1;Name=HJH9165250.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020417.6;locus_tag=O5D79_003839;product=diol dehydratase reactivase ATPase-like domain-containing protein;protein_id=HJH9165250.1;transl_table=11 DALFDJ020000022.1 tpg pseudogene 96552 96917 . - . ID=gene-O5D79_003840;Name=O5D79_003840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_003840;pseudo=true DALFDJ020000022.1 Protein Homology CDS 96552 96917 . - 0 ID=cds-O5D79_003840;Parent=gene-O5D79_003840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228916.1;locus_tag=O5D79_003840;product=diol dehydratase reactivase ATPase-like domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000022.1 tpg gene 96984 97241 . + . ID=gene-O5D79_003841;Name=O5D79_003841;end_range=97241,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003841;partial=true DALFDJ020000022.1 Protein Homology CDS 96984 97241 . + 0 ID=cds-HJH9165251.1;Parent=gene-O5D79_003841;Dbxref=NCBI_GP:HJH9165251.1;Name=HJH9165251.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=97241,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=O5D79_003841;partial=true;product=transposase;protein_id=HJH9165251.1;transl_table=11 ##sequence-region DALFDJ020000023.1 1 96912 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000023.1 tpg region 1 96912 . + . ID=DALFDJ020000023.1:1..96912;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000023.1 tpg gene 67 1239 . - . ID=gene-O5D79_003842;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=O5D79_003842 DALFDJ020000023.1 Protein Homology CDS 67 1239 . - 0 ID=cds-HJH9165252.1;Parent=gene-O5D79_003842;Dbxref=NCBI_GP:HJH9165252.1;Name=HJH9165252.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462212.1;locus_tag=O5D79_003842;product=Obg family GTPase CgtA;protein_id=HJH9165252.1;transl_table=11 DALFDJ020000023.1 tpg gene 1255 2220 . - . ID=gene-O5D79_003843;Name=O5D79_003843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003843 DALFDJ020000023.1 Protein Homology CDS 1255 2220 . - 0 ID=cds-HJH9165253.1;Parent=gene-O5D79_003843;Dbxref=NCBI_GP:HJH9165253.1;Name=HJH9165253.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=O5D79_003843;product=DMT family transporter;protein_id=HJH9165253.1;transl_table=11 DALFDJ020000023.1 tpg gene 2350 2607 . - . ID=gene-O5D79_003844;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=O5D79_003844 DALFDJ020000023.1 Protein Homology CDS 2350 2607 . - 0 ID=cds-HJH9165254.1;Parent=gene-O5D79_003844;Dbxref=NCBI_GP:HJH9165254.1;Name=HJH9165254.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=O5D79_003844;product=50S ribosomal protein L27;protein_id=HJH9165254.1;transl_table=11 DALFDJ020000023.1 tpg gene 2627 2938 . - . ID=gene-O5D79_003845;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=O5D79_003845 DALFDJ020000023.1 Protein Homology CDS 2627 2938 . - 0 ID=cds-HJH9165255.1;Parent=gene-O5D79_003845;Dbxref=NCBI_GP:HJH9165255.1;Name=HJH9165255.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=O5D79_003845;product=50S ribosomal protein L21;protein_id=HJH9165255.1;transl_table=11 DALFDJ020000023.1 tpg gene 3196 4167 . + . ID=gene-O5D79_003846;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=O5D79_003846 DALFDJ020000023.1 Protein Homology CDS 3196 4167 . + 0 ID=cds-HJH9165256.1;Parent=gene-O5D79_003846;Dbxref=NCBI_GP:HJH9165256.1;Name=HJH9165256.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462215.1;locus_tag=O5D79_003846;product=octaprenyl diphosphate synthase;protein_id=HJH9165256.1;transl_table=11 DALFDJ020000023.1 tpg gene 4399 4686 . + . ID=gene-O5D79_003847;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=O5D79_003847 DALFDJ020000023.1 Protein Homology CDS 4399 4686 . + 0 ID=cds-HJH9165257.1;Parent=gene-O5D79_003847;Dbxref=NCBI_GP:HJH9165257.1;Name=HJH9165257.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462216.1;locus_tag=O5D79_003847;product=DNA-binding transcriptional regulator SfsB;protein_id=HJH9165257.1;transl_table=11 DALFDJ020000023.1 tpg gene 4744 6003 . - . ID=gene-O5D79_003848;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=O5D79_003848 DALFDJ020000023.1 Protein Homology CDS 4744 6003 . - 0 ID=cds-HJH9165258.1;Parent=gene-O5D79_003848;Dbxref=NCBI_GP:HJH9165258.1;Name=HJH9165258.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462217.1;locus_tag=O5D79_003848;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=HJH9165258.1;transl_table=11 DALFDJ020000023.1 tpg gene 6057 6311 . - . ID=gene-O5D79_003849;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=O5D79_003849 DALFDJ020000023.1 Protein Homology CDS 6057 6311 . - 0 ID=cds-HJH9165259.1;Parent=gene-O5D79_003849;Dbxref=NCBI_GP:HJH9165259.1;Name=HJH9165259.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=O5D79_003849;product=BolA family iron metabolism protein IbaG;protein_id=HJH9165259.1;transl_table=11 DALFDJ020000023.1 tpg gene 6499 6795 . - . ID=gene-O5D79_003850;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=O5D79_003850 DALFDJ020000023.1 Protein Homology CDS 6499 6795 . - 0 ID=cds-HJH9165260.1;Parent=gene-O5D79_003850;Dbxref=NCBI_GP:HJH9165260.1;Name=HJH9165260.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462219.1;locus_tag=O5D79_003850;product=lipid asymmetry maintenance protein MlaB;protein_id=HJH9165260.1;transl_table=11 DALFDJ020000023.1 tpg gene 6795 7430 . - . ID=gene-O5D79_003851;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=O5D79_003851 DALFDJ020000023.1 Protein Homology CDS 6795 7430 . - 0 ID=cds-HJH9165261.1;Parent=gene-O5D79_003851;Dbxref=NCBI_GP:HJH9165261.1;Name=HJH9165261.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462220.1;locus_tag=O5D79_003851;product=phospholipid-binding protein MlaC;protein_id=HJH9165261.1;transl_table=11 DALFDJ020000023.1 tpg gene 7449 8000 . - . ID=gene-O5D79_003852;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=O5D79_003852 DALFDJ020000023.1 Protein Homology CDS 7449 8000 . - 0 ID=cds-HJH9165262.1;Parent=gene-O5D79_003852;Dbxref=NCBI_GP:HJH9165262.1;Name=HJH9165262.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462221.1;locus_tag=O5D79_003852;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=HJH9165262.1;transl_table=11 DALFDJ020000023.1 tpg gene 8005 8787 . - . ID=gene-O5D79_003853;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=O5D79_003853 DALFDJ020000023.1 Protein Homology CDS 8005 8787 . - 0 ID=cds-HJH9165263.1;Parent=gene-O5D79_003853;Dbxref=NCBI_GP:HJH9165263.1;Name=HJH9165263.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=O5D79_003853;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=HJH9165263.1;transl_table=11 DALFDJ020000023.1 tpg gene 8795 9607 . - . ID=gene-O5D79_003854;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=O5D79_003854 DALFDJ020000023.1 Protein Homology CDS 8795 9607 . - 0 ID=cds-HJH9165264.1;Parent=gene-O5D79_003854;Dbxref=NCBI_GP:HJH9165264.1;Name=HJH9165264.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462223.1;locus_tag=O5D79_003854;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=HJH9165264.1;transl_table=11 DALFDJ020000023.1 tpg gene 9820 10797 . + . ID=gene-O5D79_003855;Name=O5D79_003855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003855 DALFDJ020000023.1 Protein Homology CDS 9820 10797 . + 0 ID=cds-HJH9165265.1;Parent=gene-O5D79_003855;Dbxref=NCBI_GP:HJH9165265.1;Name=HJH9165265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462224.1;locus_tag=O5D79_003855;product=calcium/sodium antiporter;protein_id=HJH9165265.1;transl_table=11 DALFDJ020000023.1 tpg gene 10811 11797 . + . ID=gene-O5D79_003856;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=O5D79_003856 DALFDJ020000023.1 Protein Homology CDS 10811 11797 . + 0 ID=cds-HJH9165266.1;Parent=gene-O5D79_003856;Dbxref=NCBI_GP:HJH9165266.1;Name=HJH9165266.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=O5D79_003856;product=arabinose-5-phosphate isomerase KdsD;protein_id=HJH9165266.1;transl_table=11 DALFDJ020000023.1 tpg gene 11818 12384 . + . ID=gene-O5D79_003857;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=O5D79_003857 DALFDJ020000023.1 Protein Homology CDS 11818 12384 . + 0 ID=cds-HJH9165267.1;Parent=gene-O5D79_003857;Dbxref=NCBI_GP:HJH9165267.1;Name=HJH9165267.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462226.1;locus_tag=O5D79_003857;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=HJH9165267.1;transl_table=11 DALFDJ020000023.1 tpg gene 12381 12956 . + . ID=gene-O5D79_003858;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=O5D79_003858 DALFDJ020000023.1 Protein Homology CDS 12381 12956 . + 0 ID=cds-HJH9165268.1;Parent=gene-O5D79_003858;Dbxref=NCBI_GP:HJH9165268.1;Name=HJH9165268.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462227.1;locus_tag=O5D79_003858;product=LPS export ABC transporter periplasmic protein LptC;protein_id=HJH9165268.1;transl_table=11 DALFDJ020000023.1 tpg gene 12925 13479 . + . ID=gene-O5D79_003859;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=O5D79_003859 DALFDJ020000023.1 Protein Homology CDS 12925 13479 . + 0 ID=cds-HJH9165269.1;Parent=gene-O5D79_003859;Dbxref=NCBI_GP:HJH9165269.1;Name=HJH9165269.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=O5D79_003859;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=HJH9165269.1;transl_table=11 DALFDJ020000023.1 tpg gene 13486 14211 . + . ID=gene-O5D79_003860;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=O5D79_003860 DALFDJ020000023.1 Protein Homology CDS 13486 14211 . + 0 ID=cds-HJH9165270.1;Parent=gene-O5D79_003860;Dbxref=NCBI_GP:HJH9165270.1;Name=HJH9165270.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=O5D79_003860;product=LPS export ABC transporter ATP-binding protein;protein_id=HJH9165270.1;transl_table=11 DALFDJ020000023.1 tpg gene 14259 15692 . + . ID=gene-O5D79_003861;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=O5D79_003861 DALFDJ020000023.1 Protein Homology CDS 14259 15692 . + 0 ID=cds-HJH9165271.1;Parent=gene-O5D79_003861;Dbxref=NCBI_GP:HJH9165271.1;Name=HJH9165271.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462230.1;locus_tag=O5D79_003861;product=RNA polymerase factor sigma-54;protein_id=HJH9165271.1;transl_table=11 DALFDJ020000023.1 tpg gene 15715 16002 . + . ID=gene-O5D79_003862;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=O5D79_003862 DALFDJ020000023.1 Protein Homology CDS 15715 16002 . + 0 ID=cds-HJH9165272.1;Parent=gene-O5D79_003862;Dbxref=NCBI_GP:HJH9165272.1;Name=HJH9165272.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=O5D79_003862;product=ribosome hibernation promoting factor;protein_id=HJH9165272.1;transl_table=11 DALFDJ020000023.1 tpg gene 16120 16611 . + . ID=gene-O5D79_003863;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=O5D79_003863 DALFDJ020000023.1 Protein Homology CDS 16120 16611 . + 0 ID=cds-HJH9165273.1;Parent=gene-O5D79_003863;Dbxref=NCBI_GP:HJH9165273.1;Name=HJH9165273.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462232.1;locus_tag=O5D79_003863;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=HJH9165273.1;transl_table=11 DALFDJ020000023.1 tpg gene 16657 17511 . + . ID=gene-O5D79_003864;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=O5D79_003864 DALFDJ020000023.1 Protein Homology CDS 16657 17511 . + 0 ID=cds-HJH9165274.1;Parent=gene-O5D79_003864;Dbxref=NCBI_GP:HJH9165274.1;Name=HJH9165274.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462233.1;locus_tag=O5D79_003864;product=RNase adapter RapZ;protein_id=HJH9165274.1;transl_table=11 DALFDJ020000023.1 tpg gene 17508 17780 . + . ID=gene-O5D79_003865;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=O5D79_003865 DALFDJ020000023.1 Protein Homology CDS 17508 17780 . + 0 ID=cds-HJH9165275.1;Parent=gene-O5D79_003865;Dbxref=NCBI_GP:HJH9165275.1;Name=HJH9165275.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=O5D79_003865;product=PTS phosphocarrier protein NPr;protein_id=HJH9165275.1;transl_table=11 DALFDJ020000023.1 tpg gene 18031 18663 . + . ID=gene-O5D79_003866;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=O5D79_003866 DALFDJ020000023.1 Protein Homology CDS 18031 18663 . + 0 ID=cds-HJH9165276.1;Parent=gene-O5D79_003866;Dbxref=NCBI_GP:HJH9165276.1;Name=HJH9165276.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462235.1;locus_tag=O5D79_003866;product=PhoP regulatory network protein YrbL;protein_id=HJH9165276.1;transl_table=11 DALFDJ020000023.1 tpg gene 18738 19466 . - . ID=gene-O5D79_003867;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=O5D79_003867 DALFDJ020000023.1 Protein Homology CDS 18738 19466 . - 0 ID=cds-HJH9165277.1;Parent=gene-O5D79_003867;Dbxref=NCBI_GP:HJH9165277.1;Name=HJH9165277.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462236.1;locus_tag=O5D79_003867;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=HJH9165277.1;transl_table=11 DALFDJ020000023.1 tpg gene 19463 20116 . - . ID=gene-O5D79_003868;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=O5D79_003868 DALFDJ020000023.1 Protein Homology CDS 19463 20116 . - 0 ID=cds-HJH9165278.1;Parent=gene-O5D79_003868;Dbxref=NCBI_GP:HJH9165278.1;Name=HJH9165278.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462237.1;locus_tag=O5D79_003868;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=HJH9165278.1;transl_table=11 DALFDJ020000023.1 tpg gene 20343 22679 . - . ID=gene-O5D79_003869;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=O5D79_003869 DALFDJ020000023.1 Protein Homology CDS 20343 22679 . - 0 ID=cds-HJH9165279.1;Parent=gene-O5D79_003869;Dbxref=NCBI_GP:HJH9165279.1;Name=HJH9165279.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462238.1;locus_tag=O5D79_003869;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=HJH9165279.1;transl_table=11 DALFDJ020000023.1 tpg gene 22773 23702 . - . ID=gene-O5D79_003870;Name=O5D79_003870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003870 DALFDJ020000023.1 Protein Homology CDS 22773 23702 . - 0 ID=cds-HJH9165280.1;Parent=gene-O5D79_003870;Dbxref=NCBI_GP:HJH9165280.1;Name=HJH9165280.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462239.1;locus_tag=O5D79_003870;product=TIGR01212 family radical SAM protein;protein_id=HJH9165280.1;transl_table=11 DALFDJ020000023.1 tpg gene 24374 28834 . + . ID=gene-O5D79_003871;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=O5D79_003871 DALFDJ020000023.1 Protein Homology CDS 24374 28834 . + 0 ID=cds-HJH9165281.1;Parent=gene-O5D79_003871;Dbxref=NCBI_GP:HJH9165281.1;Name=HJH9165281.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=O5D79_003871;product=glutamate synthase large subunit;protein_id=HJH9165281.1;transl_table=11 DALFDJ020000023.1 tpg gene 28844 30262 . + . ID=gene-O5D79_003872;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=O5D79_003872 DALFDJ020000023.1 Protein Homology CDS 28844 30262 . + 0 ID=cds-HJH9165282.1;Parent=gene-O5D79_003872;Dbxref=NCBI_GP:HJH9165282.1;Name=HJH9165282.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=O5D79_003872;product=glutamate synthase subunit GltD;protein_id=HJH9165282.1;transl_table=11 DALFDJ020000023.1 tpg gene 30470 31573 . + . ID=gene-O5D79_003873;Name=O5D79_003873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003873 DALFDJ020000023.1 Protein Homology CDS 30470 31573 . + 0 ID=cds-HJH9165283.1;Parent=gene-O5D79_003873;Dbxref=NCBI_GP:HJH9165283.1;Name=HJH9165283.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462242.1;locus_tag=O5D79_003873;product=PDDEXK nuclease domain-containing protein;protein_id=HJH9165283.1;transl_table=11 DALFDJ020000023.1 tpg gene 31689 32942 . + . ID=gene-O5D79_003874;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=O5D79_003874 DALFDJ020000023.1 Protein Homology CDS 31689 32942 . + 0 ID=cds-HJH9165284.1;Parent=gene-O5D79_003874;Dbxref=NCBI_GP:HJH9165284.1;Name=HJH9165284.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462243.1;locus_tag=O5D79_003874;product=cytosine permease;protein_id=HJH9165284.1;transl_table=11 DALFDJ020000023.1 tpg gene 32929 34209 . + . ID=gene-O5D79_003875;Name=O5D79_003875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003875 DALFDJ020000023.1 Protein Homology CDS 32929 34209 . + 0 ID=cds-HJH9165285.1;Parent=gene-O5D79_003875;Dbxref=NCBI_GP:HJH9165285.1;Name=HJH9165285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462244.1;locus_tag=O5D79_003875;product=cytosine deaminase;protein_id=HJH9165285.1;transl_table=11 DALFDJ020000023.1 tpg gene 34292 34759 . - . ID=gene-O5D79_003876;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=O5D79_003876 DALFDJ020000023.1 Protein Homology CDS 34292 34759 . - 0 ID=cds-HJH9165286.1;Parent=gene-O5D79_003876;Dbxref=NCBI_GP:HJH9165286.1;Name=HJH9165286.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462245.1;locus_tag=O5D79_003876;product=N-acetylneuraminate anomerase;protein_id=HJH9165286.1;transl_table=11 DALFDJ020000023.1 tpg gene 34756 35631 . - . ID=gene-O5D79_003877;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=O5D79_003877 DALFDJ020000023.1 Protein Homology CDS 34756 35631 . - 0 ID=cds-HJH9165287.1;Parent=gene-O5D79_003877;Dbxref=NCBI_GP:HJH9165287.1;Name=HJH9165287.1;Ontology_term=GO:0019262,GO:0005524,GO:0009384;gbkey=CDS;gene=nanK;go_function=ATP binding|0005524||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462246.1;locus_tag=O5D79_003877;product=N-acetylmannosamine kinase;protein_id=HJH9165287.1;transl_table=11 DALFDJ020000023.1 tpg gene 35628 36317 . - . ID=gene-O5D79_003878;Name=O5D79_003878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003878 DALFDJ020000023.1 Protein Homology CDS 35628 36317 . - 0 ID=cds-HJH9165288.1;Parent=gene-O5D79_003878;Dbxref=NCBI_GP:HJH9165288.1;Name=HJH9165288.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462247.1;locus_tag=O5D79_003878;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=HJH9165288.1;transl_table=11 DALFDJ020000023.1 tpg gene 36364 37854 . - . ID=gene-O5D79_003879;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=O5D79_003879 DALFDJ020000023.1 Protein Homology CDS 36364 37854 . - 0 ID=cds-HJH9165289.1;Parent=gene-O5D79_003879;Dbxref=NCBI_GP:HJH9165289.1;Name=HJH9165289.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462248.1;locus_tag=O5D79_003879;product=sialic acid transporter NanT;protein_id=HJH9165289.1;transl_table=11 DALFDJ020000023.1 tpg gene 37970 38863 . - . ID=gene-O5D79_003880;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=O5D79_003880 DALFDJ020000023.1 Protein Homology CDS 37970 38863 . - 0 ID=cds-HJH9165290.1;Parent=gene-O5D79_003880;Dbxref=NCBI_GP:HJH9165290.1;Name=HJH9165290.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462249.1;locus_tag=O5D79_003880;product=N-acetylneuraminate lyase;protein_id=HJH9165290.1;transl_table=11 DALFDJ020000023.1 tpg gene 38998 39789 . - . ID=gene-O5D79_003881;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=O5D79_003881 DALFDJ020000023.1 Protein Homology CDS 38998 39789 . - 0 ID=cds-HJH9165291.1;Parent=gene-O5D79_003881;Dbxref=NCBI_GP:HJH9165291.1;Name=HJH9165291.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462250.1;locus_tag=O5D79_003881;product=transcriptional regulator NanR;protein_id=HJH9165291.1;transl_table=11 DALFDJ020000023.1 tpg gene 39898 40398 . - . ID=gene-O5D79_003882;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=O5D79_003882 DALFDJ020000023.1 Protein Homology CDS 39898 40398 . - 0 ID=cds-HJH9165292.1;Parent=gene-O5D79_003882;Dbxref=NCBI_GP:HJH9165292.1;Name=HJH9165292.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462251.1;locus_tag=O5D79_003882;product=ClpXP protease specificity-enhancing factor;protein_id=HJH9165292.1;transl_table=11 DALFDJ020000023.1 tpg gene 40404 41042 . - . ID=gene-O5D79_003883;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=O5D79_003883 DALFDJ020000023.1 Protein Homology CDS 40404 41042 . - 0 ID=cds-HJH9165293.1;Parent=gene-O5D79_003883;Dbxref=NCBI_GP:HJH9165293.1;Name=HJH9165293.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=O5D79_003883;product=stringent starvation protein SspA;protein_id=HJH9165293.1;transl_table=11 DALFDJ020000023.1 tpg gene 41305 42057 . - . ID=gene-O5D79_003884;Name=O5D79_003884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003884 DALFDJ020000023.1 Protein Homology CDS 41305 42057 . - 0 ID=cds-HJH9165294.1;Parent=gene-O5D79_003884;Dbxref=NCBI_GP:HJH9165294.1;Name=HJH9165294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462253.1;locus_tag=O5D79_003884;product=DUF695 domain-containing protein;protein_id=HJH9165294.1;transl_table=11 DALFDJ020000023.1 tpg gene 42257 42649 . - . ID=gene-O5D79_003885;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=O5D79_003885 DALFDJ020000023.1 Protein Homology CDS 42257 42649 . - 0 ID=cds-HJH9165295.1;Parent=gene-O5D79_003885;Dbxref=NCBI_GP:HJH9165295.1;Name=HJH9165295.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=O5D79_003885;product=30S ribosomal protein S9;protein_id=HJH9165295.1;transl_table=11 DALFDJ020000023.1 tpg gene 42665 43093 . - . ID=gene-O5D79_003886;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=O5D79_003886 DALFDJ020000023.1 Protein Homology CDS 42665 43093 . - 0 ID=cds-HJH9165296.1;Parent=gene-O5D79_003886;Dbxref=NCBI_GP:HJH9165296.1;Name=HJH9165296.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=O5D79_003886;product=50S ribosomal protein L13;protein_id=HJH9165296.1;transl_table=11 DALFDJ020000023.1 tpg gene 43395 44519 . - . ID=gene-O5D79_003887;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=O5D79_003887 DALFDJ020000023.1 Protein Homology CDS 43395 44519 . - 0 ID=cds-HJH9165297.1;Parent=gene-O5D79_003887;Dbxref=NCBI_GP:HJH9165297.1;Name=HJH9165297.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462256.1;locus_tag=O5D79_003887;product=cell division protein ZapE;protein_id=HJH9165297.1;transl_table=11 DALFDJ020000023.1 tpg gene 44712 45110 . + . ID=gene-O5D79_003888;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=O5D79_003888 DALFDJ020000023.1 Protein Homology CDS 44712 45110 . + 0 ID=cds-HJH9165298.1;Parent=gene-O5D79_003888;Dbxref=NCBI_GP:HJH9165298.1;Name=HJH9165298.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=O5D79_003888;product=Z-ring associated protein ZapG;protein_id=HJH9165298.1;transl_table=11 DALFDJ020000023.1 tpg gene 45267 46634 . + . ID=gene-O5D79_003889;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=O5D79_003889 DALFDJ020000023.1 Protein Homology CDS 45267 46634 . + 0 ID=cds-HJH9165299.1;Parent=gene-O5D79_003889;Dbxref=NCBI_GP:HJH9165299.1;Name=HJH9165299.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462258.1;locus_tag=O5D79_003889;product=serine endoprotease DegQ;protein_id=HJH9165299.1;transl_table=11 DALFDJ020000023.1 tpg gene 46727 47797 . + . ID=gene-O5D79_003890;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=O5D79_003890 DALFDJ020000023.1 Protein Homology CDS 46727 47797 . + 0 ID=cds-HJH9165300.1;Parent=gene-O5D79_003890;Dbxref=NCBI_GP:HJH9165300.1;Name=HJH9165300.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462259.1;locus_tag=O5D79_003890;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=HJH9165300.1;transl_table=11 DALFDJ020000023.1 tpg gene 47831 48562 . - . ID=gene-O5D79_003891;Name=O5D79_003891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003891 DALFDJ020000023.1 Protein Homology CDS 47831 48562 . - 0 ID=cds-HJH9165301.1;Parent=gene-O5D79_003891;Dbxref=NCBI_GP:HJH9165301.1;Name=HJH9165301.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462260.1;locus_tag=O5D79_003891;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=HJH9165301.1;transl_table=11 DALFDJ020000023.1 tpg gene 48582 49883 . - . ID=gene-O5D79_003892;Name=O5D79_003892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003892 DALFDJ020000023.1 Protein Homology CDS 48582 49883 . - 0 ID=cds-HJH9165302.1;Parent=gene-O5D79_003892;Dbxref=NCBI_GP:HJH9165302.1;Name=HJH9165302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459059.1;locus_tag=O5D79_003892;product=oxalacetate decarboxylase subunit beta;protein_id=HJH9165302.1;transl_table=11 DALFDJ020000023.1 tpg gene 49896 51665 . - . ID=gene-O5D79_003893;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=O5D79_003893 DALFDJ020000023.1 Protein Homology CDS 49896 51665 . - 0 ID=cds-HJH9165303.1;Parent=gene-O5D79_003893;Dbxref=NCBI_GP:HJH9165303.1;Name=HJH9165303.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459060.1;locus_tag=O5D79_003893;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=HJH9165303.1;transl_table=11 DALFDJ020000023.1 tpg gene 51681 51929 . - . ID=gene-O5D79_003894;Name=O5D79_003894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003894 DALFDJ020000023.1 Protein Homology CDS 51681 51929 . - 0 ID=cds-HJH9165304.1;Parent=gene-O5D79_003894;Dbxref=NCBI_GP:HJH9165304.1;Name=HJH9165304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462263.1;locus_tag=O5D79_003894;product=oxaloacetate decarboxylase subunit gamma;protein_id=HJH9165304.1;transl_table=11 DALFDJ020000023.1 tpg gene 52086 52703 . - . ID=gene-O5D79_003895;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=O5D79_003895 DALFDJ020000023.1 Protein Homology CDS 52086 52703 . - 0 ID=cds-HJH9165305.1;Parent=gene-O5D79_003895;Dbxref=NCBI_GP:HJH9165305.1;Name=HJH9165305.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462264.1;locus_tag=O5D79_003895;product=L(+)-tartrate dehydratase subunit beta;protein_id=HJH9165305.1;transl_table=11 DALFDJ020000023.1 tpg gene 52703 53602 . - . ID=gene-O5D79_003896;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=O5D79_003896 DALFDJ020000023.1 Protein Homology CDS 52703 53602 . - 0 ID=cds-HJH9165306.1;Parent=gene-O5D79_003896;Dbxref=NCBI_GP:HJH9165306.1;Name=HJH9165306.1;Ontology_term=GO:0008730;gbkey=CDS;gene=ttdA;go_function=L(+)-tartrate dehydratase activity|0008730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462265.1;locus_tag=O5D79_003896;product=L(+)-tartrate dehydratase subunit alpha;protein_id=HJH9165306.1;transl_table=11 DALFDJ020000023.1 tpg gene 53635 54903 . - . ID=gene-O5D79_003897;Name=O5D79_003897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003897 DALFDJ020000023.1 Protein Homology CDS 53635 54903 . - 0 ID=cds-HJH9165307.1;Parent=gene-O5D79_003897;Dbxref=NCBI_GP:HJH9165307.1;Name=HJH9165307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462266.1;locus_tag=O5D79_003897;product=SLC13 family permease;protein_id=HJH9165307.1;transl_table=11 DALFDJ020000023.1 tpg gene 55114 55779 . - . ID=gene-O5D79_003898;Name=O5D79_003898;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003898 DALFDJ020000023.1 Protein Homology CDS 55114 55779 . - 0 ID=cds-HJH9165308.1;Parent=gene-O5D79_003898;Dbxref=NCBI_GP:HJH9165308.1;Name=HJH9165308.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462267.1;locus_tag=O5D79_003898;product=GntR family transcriptional regulator;protein_id=HJH9165308.1;transl_table=11 DALFDJ020000023.1 tpg gene 55766 56395 . - . ID=gene-O5D79_003899;Name=O5D79_003899;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003899 DALFDJ020000023.1 Protein Homology CDS 55766 56395 . - 0 ID=cds-HJH9165309.1;Parent=gene-O5D79_003899;Dbxref=NCBI_GP:HJH9165309.1;Name=HJH9165309.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462268.1;locus_tag=O5D79_003899;product=GntR family transcriptional regulator;protein_id=HJH9165309.1;transl_table=11 DALFDJ020000023.1 tpg gene 56515 57453 . - . ID=gene-O5D79_003900;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=O5D79_003900 DALFDJ020000023.1 Protein Homology CDS 56515 57453 . - 0 ID=cds-HJH9165310.1;Parent=gene-O5D79_003900;Dbxref=NCBI_GP:HJH9165310.1;Name=HJH9165310.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=O5D79_003900;product=malate dehydrogenase;protein_id=HJH9165310.1;transl_table=11 DALFDJ020000023.1 tpg gene 57868 58338 . + . ID=gene-O5D79_003901;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=O5D79_003901 DALFDJ020000023.1 Protein Homology CDS 57868 58338 . + 0 ID=cds-HJH9165311.1;Parent=gene-O5D79_003901;Dbxref=NCBI_GP:HJH9165311.1;Name=HJH9165311.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=O5D79_003901;product=transcriptional regulator ArgR;protein_id=HJH9165311.1;transl_table=11 DALFDJ020000023.1 tpg gene 58703 58966 . + . ID=gene-O5D79_003902;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=O5D79_003902 DALFDJ020000023.1 Protein Homology CDS 58703 58966 . + 0 ID=cds-HJH9165312.1;Parent=gene-O5D79_003902;Dbxref=NCBI_GP:HJH9165312.1;Name=HJH9165312.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462271.1;locus_tag=O5D79_003902;product=peroxide/acid stress response protein YhcN;protein_id=HJH9165312.1;transl_table=11 DALFDJ020000023.1 tpg gene 59070 59336 . + . ID=gene-O5D79_003903;Name=yhcN-B;gbkey=Gene;gene=yhcN-B;gene_biotype=protein_coding;locus_tag=O5D79_003903 DALFDJ020000023.1 Protein Homology CDS 59070 59336 . + 0 ID=cds-HJH9165313.1;Parent=gene-O5D79_003903;Dbxref=NCBI_GP:HJH9165313.1;Name=HJH9165313.1;gbkey=CDS;gene=yhcN-B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=O5D79_003903;product=DUF1471 family stress response protein YhcN-B;protein_id=HJH9165313.1;transl_table=11 DALFDJ020000023.1 tpg gene 59396 59668 . - . ID=gene-O5D79_003904;Name=O5D79_003904;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003904 DALFDJ020000023.1 Protein Homology CDS 59396 59668 . - 0 ID=cds-HJH9165314.1;Parent=gene-O5D79_003904;Dbxref=NCBI_GP:HJH9165314.1;Name=HJH9165314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462273.1;locus_tag=O5D79_003904;product=barstar family protein;protein_id=HJH9165314.1;transl_table=11 DALFDJ020000023.1 tpg gene 59840 61807 . - . ID=gene-O5D79_003905;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=O5D79_003905 DALFDJ020000023.1 Protein Homology CDS 59840 61807 . - 0 ID=cds-HJH9165315.1;Parent=gene-O5D79_003905;Dbxref=NCBI_GP:HJH9165315.1;Name=HJH9165315.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=O5D79_003905;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=HJH9165315.1;transl_table=11 DALFDJ020000023.1 tpg gene 61813 62745 . - . ID=gene-O5D79_003906;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=O5D79_003906 DALFDJ020000023.1 Protein Homology CDS 61813 62745 . - 0 ID=cds-HJH9165316.1;Parent=gene-O5D79_003906;Dbxref=NCBI_GP:HJH9165316.1;Name=HJH9165316.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462275.1;locus_tag=O5D79_003906;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=HJH9165316.1;transl_table=11 DALFDJ020000023.1 tpg gene 62753 62956 . - . ID=gene-O5D79_003907;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=O5D79_003907 DALFDJ020000023.1 Protein Homology CDS 62753 62956 . - 0 ID=cds-HJH9165317.1;Parent=gene-O5D79_003907;Dbxref=NCBI_GP:HJH9165317.1;Name=HJH9165317.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=O5D79_003907;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=HJH9165317.1;transl_table=11 DALFDJ020000023.1 tpg gene 63138 64067 . + . ID=gene-O5D79_003908;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=O5D79_003908 DALFDJ020000023.1 Protein Homology CDS 63138 64067 . + 0 ID=cds-HJH9165318.1;Parent=gene-O5D79_003908;Dbxref=NCBI_GP:HJH9165318.1;Name=HJH9165318.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462277.1;locus_tag=O5D79_003908;product=HTH-type transcriptional activator AaeR;protein_id=HJH9165318.1;transl_table=11 DALFDJ020000023.1 tpg gene 64190 65635 . - . ID=gene-O5D79_003909;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=O5D79_003909 DALFDJ020000023.1 Protein Homology CDS 64190 65635 . - 0 ID=cds-HJH9165319.1;Parent=gene-O5D79_003909;Dbxref=NCBI_GP:HJH9165319.1;Name=HJH9165319.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=O5D79_003909;product=metalloprotease TldD;protein_id=HJH9165319.1;transl_table=11 DALFDJ020000023.1 tpg gene 65780 69580 . - . ID=gene-O5D79_003910;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=O5D79_003910 DALFDJ020000023.1 Protein Homology CDS 65780 69580 . - 0 ID=cds-HJH9165320.1;Parent=gene-O5D79_003910;Dbxref=NCBI_GP:HJH9165320.1;Name=HJH9165320.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=O5D79_003910;product=AsmA2 domain-containing protein YhdP;protein_id=HJH9165320.1;transl_table=11 DALFDJ020000023.1 tpg gene 69691 71160 . - . ID=gene-O5D79_003911;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=O5D79_003911 DALFDJ020000023.1 Protein Homology CDS 69691 71160 . - 0 ID=cds-HJH9165321.1;Parent=gene-O5D79_003911;Dbxref=NCBI_GP:HJH9165321.1;Name=HJH9165321.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=O5D79_003911;product=ribonuclease G;protein_id=HJH9165321.1;transl_table=11 DALFDJ020000023.1 tpg gene 71150 71743 . - . ID=gene-O5D79_003912;Name=O5D79_003912;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003912 DALFDJ020000023.1 Protein Homology CDS 71150 71743 . - 0 ID=cds-HJH9165322.1;Parent=gene-O5D79_003912;Dbxref=NCBI_GP:HJH9165322.1;Name=HJH9165322.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462281.1;locus_tag=O5D79_003912;product=Maf family protein;protein_id=HJH9165322.1;transl_table=11 DALFDJ020000023.1 tpg gene 71752 72240 . - . ID=gene-O5D79_003913;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=O5D79_003913 DALFDJ020000023.1 Protein Homology CDS 71752 72240 . - 0 ID=cds-HJH9165323.1;Parent=gene-O5D79_003913;Dbxref=NCBI_GP:HJH9165323.1;Name=HJH9165323.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=O5D79_003913;product=rod shape-determining protein MreD;protein_id=HJH9165323.1;transl_table=11 DALFDJ020000023.1 tpg gene 72243 73295 . - . ID=gene-O5D79_003914;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=O5D79_003914 DALFDJ020000023.1 Protein Homology CDS 72243 73295 . - 0 ID=cds-HJH9165324.1;Parent=gene-O5D79_003914;Dbxref=NCBI_GP:HJH9165324.1;Name=HJH9165324.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462283.1;locus_tag=O5D79_003914;product=rod shape-determining protein MreC;protein_id=HJH9165324.1;transl_table=11 DALFDJ020000023.1 tpg gene 73360 74403 . - . ID=gene-O5D79_003915;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=O5D79_003915 DALFDJ020000023.1 Protein Homology CDS 73360 74403 . - 0 ID=cds-HJH9165325.1;Parent=gene-O5D79_003915;Dbxref=NCBI_GP:HJH9165325.1;Name=HJH9165325.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=O5D79_003915;product=rod shape-determining protein MreB;protein_id=HJH9165325.1;transl_table=11 DALFDJ020000023.1 tpg gene 74711 76651 . - . ID=gene-O5D79_003916;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=O5D79_003916 DALFDJ020000023.1 Protein Homology CDS 74711 76651 . - 0 ID=cds-HJH9165326.1;Parent=gene-O5D79_003916;Dbxref=NCBI_GP:HJH9165326.1;Name=HJH9165326.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462285.1;locus_tag=O5D79_003916;product=RNase E specificity factor CsrD;protein_id=HJH9165326.1;transl_table=11 DALFDJ020000023.1 tpg gene 76855 77829 . + . ID=gene-O5D79_003917;Name=O5D79_003917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003917 DALFDJ020000023.1 Protein Homology CDS 76855 77829 . + 0 ID=cds-HJH9165327.1;Parent=gene-O5D79_003917;Dbxref=NCBI_GP:HJH9165327.1;Name=HJH9165327.1;Ontology_term=GO:0004022,GO:0008270,GO:0030554;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462286.1;locus_tag=O5D79_003917;product=MDR family oxidoreductase;protein_id=HJH9165327.1;transl_table=11 DALFDJ020000023.1 tpg gene 77942 78946 . + . ID=gene-O5D79_003918;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=O5D79_003918 DALFDJ020000023.1 Protein Homology CDS 77942 78946 . + 0 ID=cds-HJH9165328.1;Parent=gene-O5D79_003918;Dbxref=NCBI_GP:HJH9165328.1;Name=HJH9165328.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462287.1;locus_tag=O5D79_003918;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=HJH9165328.1;transl_table=11 DALFDJ020000023.1 tpg gene 78947 79546 . + . ID=gene-O5D79_003919;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=O5D79_003919 DALFDJ020000023.1 Protein Homology CDS 78947 79546 . + 0 ID=cds-HJH9165329.1;Parent=gene-O5D79_003919;Dbxref=NCBI_GP:HJH9165329.1;Name=HJH9165329.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462288.1;locus_tag=O5D79_003919;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=HJH9165329.1;transl_table=11 DALFDJ020000023.1 tpg gene 79939 80409 . + . ID=gene-O5D79_003920;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=O5D79_003920 DALFDJ020000023.1 Protein Homology CDS 79939 80409 . + 0 ID=cds-HJH9165330.1;Parent=gene-O5D79_003920;Dbxref=NCBI_GP:HJH9165330.1;Name=HJH9165330.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462289.1;locus_tag=O5D79_003920;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=HJH9165330.1;transl_table=11 DALFDJ020000023.1 tpg gene 80420 81769 . + . ID=gene-O5D79_003921;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=O5D79_003921 DALFDJ020000023.1 Protein Homology CDS 80420 81769 . + 0 ID=cds-HJH9165331.1;Parent=gene-O5D79_003921;Dbxref=NCBI_GP:HJH9165331.1;Name=HJH9165331.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=O5D79_003921;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=HJH9165331.1;transl_table=11 DALFDJ020000023.1 tpg gene 81878 82120 . + . ID=gene-O5D79_003922;Name=O5D79_003922;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003922 DALFDJ020000023.1 Protein Homology CDS 81878 82120 . + 0 ID=cds-HJH9165332.1;Parent=gene-O5D79_003922;Dbxref=NCBI_GP:HJH9165332.1;Name=HJH9165332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=O5D79_003922;product=YhdT family protein;protein_id=HJH9165332.1;transl_table=11 DALFDJ020000023.1 tpg gene 82110 83561 . + . ID=gene-O5D79_003923;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=O5D79_003923 DALFDJ020000023.1 Protein Homology CDS 82110 83561 . + 0 ID=cds-HJH9165333.1;Parent=gene-O5D79_003923;Dbxref=NCBI_GP:HJH9165333.1;Name=HJH9165333.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462292.1;locus_tag=O5D79_003923;product=sodium/pantothenate symporter;protein_id=HJH9165333.1;transl_table=11 DALFDJ020000023.1 tpg gene 83573 84454 . + . ID=gene-O5D79_003924;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=O5D79_003924 DALFDJ020000023.1 Protein Homology CDS 83573 84454 . + 0 ID=cds-HJH9165334.1;Parent=gene-O5D79_003924;Dbxref=NCBI_GP:HJH9165334.1;Name=HJH9165334.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462293.1;locus_tag=O5D79_003924;product=50S ribosomal protein L11 methyltransferase;protein_id=HJH9165334.1;transl_table=11 DALFDJ020000023.1 tpg gene 85115 86080 . + . ID=gene-O5D79_003925;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=O5D79_003925 DALFDJ020000023.1 Protein Homology CDS 85115 86080 . + 0 ID=cds-HJH9165335.1;Parent=gene-O5D79_003925;Dbxref=NCBI_GP:HJH9165335.1;Name=HJH9165335.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=O5D79_003925;product=tRNA dihydrouridine synthase DusB;protein_id=HJH9165335.1;transl_table=11 DALFDJ020000023.1 tpg gene 86106 86402 . + . ID=gene-O5D79_003926;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=O5D79_003926 DALFDJ020000023.1 Protein Homology CDS 86106 86402 . + 0 ID=cds-HJH9165336.1;Parent=gene-O5D79_003926;Dbxref=NCBI_GP:HJH9165336.1;Name=HJH9165336.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=O5D79_003926;product=DNA-binding transcriptional regulator Fis;protein_id=HJH9165336.1;transl_table=11 DALFDJ020000023.1 tpg gene 86488 87372 . + . ID=gene-O5D79_003927;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=O5D79_003927 DALFDJ020000023.1 Protein Homology CDS 86488 87372 . + 0 ID=cds-HJH9165337.1;Parent=gene-O5D79_003927;Dbxref=NCBI_GP:HJH9165337.1;Name=HJH9165337.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462296.1;locus_tag=O5D79_003927;product=adenine-specific DNA-methyltransferase;protein_id=HJH9165337.1;transl_table=11 DALFDJ020000023.1 tpg gene 87455 87619 . + . ID=gene-O5D79_003928;Name=O5D79_003928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003928 DALFDJ020000023.1 Protein Homology CDS 87455 87619 . + 0 ID=cds-HJH9165338.1;Parent=gene-O5D79_003928;Dbxref=NCBI_GP:HJH9165338.1;Name=HJH9165338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=O5D79_003928;product=DUF2556 family protein;protein_id=HJH9165338.1;transl_table=11 DALFDJ020000023.1 tpg gene 87770 89869 . + . ID=gene-O5D79_003929;Name=O5D79_003929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003929 DALFDJ020000023.1 Protein Homology CDS 87770 89869 . + 0 ID=cds-HJH9165339.1;Parent=gene-O5D79_003929;Dbxref=NCBI_GP:HJH9165339.1;Name=HJH9165339.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462298.1;locus_tag=O5D79_003929;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=HJH9165339.1;transl_table=11 DALFDJ020000023.1 tpg gene 89872 90534 . - . ID=gene-O5D79_003930;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=O5D79_003930 DALFDJ020000023.1 Protein Homology CDS 89872 90534 . - 0 ID=cds-HJH9165340.1;Parent=gene-O5D79_003930;Dbxref=NCBI_GP:HJH9165340.1;Name=HJH9165340.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462299.1;locus_tag=O5D79_003930;product=acrEF/envCD operon transcriptional regulator;protein_id=HJH9165340.1;transl_table=11 DALFDJ020000023.1 tpg gene 90947 92104 . + . ID=gene-O5D79_003931;Name=O5D79_003931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003931 DALFDJ020000023.1 Protein Homology CDS 90947 92104 . + 0 ID=cds-HJH9165341.1;Parent=gene-O5D79_003931;Dbxref=NCBI_GP:HJH9165341.1;Name=HJH9165341.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462300.1;locus_tag=O5D79_003931;product=efflux RND transporter periplasmic adaptor subunit;protein_id=HJH9165341.1;transl_table=11 DALFDJ020000023.1 tpg gene 92116 95229 . + . ID=gene-O5D79_003932;Name=O5D79_003932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003932 DALFDJ020000023.1 Protein Homology CDS 92116 95229 . + 0 ID=cds-HJH9165342.1;Parent=gene-O5D79_003932;Dbxref=NCBI_GP:HJH9165342.1;Name=HJH9165342.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462301.1;locus_tag=O5D79_003932;product=efflux RND transporter permease subunit;protein_id=HJH9165342.1;transl_table=11 DALFDJ020000023.1 tpg gene 95466 95687 . + . ID=gene-O5D79_003933;Name=O5D79_003933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003933 DALFDJ020000023.1 Protein Homology CDS 95466 95687 . + 0 ID=cds-HJH9165343.1;Parent=gene-O5D79_003933;Dbxref=NCBI_GP:HJH9165343.1;Name=HJH9165343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462302.1;locus_tag=O5D79_003933;product=hypothetical protein;protein_id=HJH9165343.1;transl_table=11 DALFDJ020000023.1 tpg gene 96472 96587 . - . ID=gene-O5D79_003934;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=O5D79_003934 DALFDJ020000023.1 cmsearch rRNA 96472 96587 . - . ID=rna-O5D79_003934;Parent=gene-O5D79_003934;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_003934;product=5S ribosomal RNA DALFDJ020000023.1 cmsearch exon 96472 96587 . - . ID=exon-O5D79_003934-1;Parent=rna-O5D79_003934;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_003934;product=5S ribosomal RNA DALFDJ020000023.1 tpg gene 96627 96702 . - . ID=gene-O5D79_003935;Name=O5D79_003935;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_003935 DALFDJ020000023.1 tRNAscan-SE tRNA 96627 96702 . - . ID=rna-O5D79_003935;Parent=gene-O5D79_003935;anticodon=(pos:complement(96667..96669));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003935;product=tRNA-Thr DALFDJ020000023.1 tRNAscan-SE exon 96627 96702 . - . ID=exon-O5D79_003935-1;Parent=rna-O5D79_003935;anticodon=(pos:complement(96667..96669));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003935;product=tRNA-Thr DALFDJ020000023.1 tpg gene 96717 96832 . - . ID=gene-O5D79_003936;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=O5D79_003936 DALFDJ020000023.1 cmsearch rRNA 96717 96832 . - . ID=rna-O5D79_003936;Parent=gene-O5D79_003936;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_003936;product=5S ribosomal RNA DALFDJ020000023.1 cmsearch exon 96717 96832 . - . ID=exon-O5D79_003936-1;Parent=rna-O5D79_003936;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_003936;product=5S ribosomal RNA ##sequence-region DALFDJ020000024.1 1 92147 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000024.1 tpg region 1 92147 . + . ID=DALFDJ020000024.1:1..92147;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000024.1 tpg gene 21 566 . - . ID=gene-O5D79_003937;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=O5D79_003937 DALFDJ020000024.1 Protein Homology CDS 21 566 . - 0 ID=cds-HJH9165344.1;Parent=gene-O5D79_003937;Dbxref=NCBI_GP:HJH9165344.1;Name=HJH9165344.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462872.1;locus_tag=O5D79_003937;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=HJH9165344.1;transl_table=11 DALFDJ020000024.1 tpg gene 578 2029 . - . ID=gene-O5D79_003938;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=O5D79_003938 DALFDJ020000024.1 Protein Homology CDS 578 2029 . - 0 ID=cds-HJH9165345.1;Parent=gene-O5D79_003938;Dbxref=NCBI_GP:HJH9165345.1;Name=HJH9165345.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=O5D79_003938;product=Trk system potassium transporter TrkH;protein_id=HJH9165345.1;transl_table=11 DALFDJ020000024.1 tpg gene 2068 2682 . - . ID=gene-O5D79_003939;Name=O5D79_003939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003939 DALFDJ020000024.1 Protein Homology CDS 2068 2682 . - 0 ID=cds-HJH9165346.1;Parent=gene-O5D79_003939;Dbxref=NCBI_GP:HJH9165346.1;Name=HJH9165346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462870.1;locus_tag=O5D79_003939;product=IMPACT family protein;protein_id=HJH9165346.1;transl_table=11 DALFDJ020000024.1 tpg gene 2682 4013 . - . ID=gene-O5D79_003940;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=O5D79_003940 DALFDJ020000024.1 Protein Homology CDS 2682 4013 . - 0 ID=cds-HJH9165347.1;Parent=gene-O5D79_003940;Dbxref=NCBI_GP:HJH9165347.1;Name=HJH9165347.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=O5D79_003940;product=Xaa-Pro dipeptidase;protein_id=HJH9165347.1;transl_table=11 DALFDJ020000024.1 tpg gene 4203 6392 . + . ID=gene-O5D79_003941;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=O5D79_003941 DALFDJ020000024.1 Protein Homology CDS 4203 6392 . + 0 ID=cds-HJH9165348.1;Parent=gene-O5D79_003941;Dbxref=NCBI_GP:HJH9165348.1;Name=HJH9165348.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462868.1;locus_tag=O5D79_003941;product=fatty acid oxidation complex subunit alpha FadB;protein_id=HJH9165348.1;transl_table=11 DALFDJ020000024.1 tpg gene 6402 7565 . + . ID=gene-O5D79_003942;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=O5D79_003942 DALFDJ020000024.1 Protein Homology CDS 6402 7565 . + 0 ID=cds-HJH9165349.1;Parent=gene-O5D79_003942;Dbxref=NCBI_GP:HJH9165349.1;Name=HJH9165349.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462867.1;locus_tag=O5D79_003942;product=acetyl-CoA C-acyltransferase FadA;protein_id=HJH9165349.1;transl_table=11 DALFDJ020000024.1 tpg gene 7762 9585 . - . ID=gene-O5D79_003943;Name=O5D79_003943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003943 DALFDJ020000024.1 Protein Homology CDS 7762 9585 . - 0 ID=cds-HJH9165350.1;Parent=gene-O5D79_003943;Dbxref=NCBI_GP:HJH9165350.1;Name=HJH9165350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000669888.1;locus_tag=O5D79_003943;product=aryl-sulfate sulfotransferase;protein_id=HJH9165350.1;transl_table=11 DALFDJ020000024.1 tpg gene 9839 10540 . - . ID=gene-O5D79_003944;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=O5D79_003944 DALFDJ020000024.1 Protein Homology CDS 9839 10540 . - 0 ID=cds-HJH9165351.1;Parent=gene-O5D79_003944;Dbxref=NCBI_GP:HJH9165351.1;Name=HJH9165351.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=O5D79_003944;product=NAD(P)H-flavin reductase;protein_id=HJH9165351.1;transl_table=11 DALFDJ020000024.1 tpg gene 10626 12104 . - . ID=gene-O5D79_003945;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=O5D79_003945 DALFDJ020000024.1 Protein Homology CDS 10626 12104 . - 0 ID=cds-HJH9165352.1;Parent=gene-O5D79_003945;Dbxref=NCBI_GP:HJH9165352.1;Name=HJH9165352.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462863.1;locus_tag=O5D79_003945;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=HJH9165352.1;transl_table=11 DALFDJ020000024.1 tpg gene 12290 12778 . + . ID=gene-O5D79_003946;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=O5D79_003946 DALFDJ020000024.1 Protein Homology CDS 12290 12778 . + 0 ID=cds-HJH9165353.1;Parent=gene-O5D79_003946;Dbxref=NCBI_GP:HJH9165353.1;Name=HJH9165353.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=O5D79_003946;product=transcription/translation regulatory transformer protein RfaH;protein_id=HJH9165353.1;transl_table=11 DALFDJ020000024.1 tpg gene 12786 13568 . - . ID=gene-O5D79_003947;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=O5D79_003947 DALFDJ020000024.1 Protein Homology CDS 12786 13568 . - 0 ID=cds-HJH9165354.1;Parent=gene-O5D79_003947;Dbxref=NCBI_GP:HJH9165354.1;Name=HJH9165354.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462861.3;locus_tag=O5D79_003947;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=HJH9165354.1;transl_table=11 DALFDJ020000024.1 tpg gene 13610 14389 . - . ID=gene-O5D79_003948;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=O5D79_003948 DALFDJ020000024.1 Protein Homology CDS 13610 14389 . - 0 ID=cds-HJH9165355.1;Parent=gene-O5D79_003948;Dbxref=NCBI_GP:HJH9165355.1;Name=HJH9165355.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462860.1;locus_tag=O5D79_003948;product=Sec-independent protein translocase subunit TatC;protein_id=HJH9165355.1;transl_table=11 DALFDJ020000024.1 tpg gene 14392 14940 . - . ID=gene-O5D79_003949;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=O5D79_003949 DALFDJ020000024.1 Protein Homology CDS 14392 14940 . - 0 ID=cds-HJH9165356.1;Parent=gene-O5D79_003949;Dbxref=NCBI_GP:HJH9165356.1;Name=HJH9165356.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462859.1;locus_tag=O5D79_003949;product=Sec-independent protein translocase protein TatB;protein_id=HJH9165356.1;transl_table=11 DALFDJ020000024.1 tpg gene 14944 15198 . - . ID=gene-O5D79_003950;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=O5D79_003950 DALFDJ020000024.1 Protein Homology CDS 14944 15198 . - 0 ID=cds-HJH9165357.1;Parent=gene-O5D79_003950;Dbxref=NCBI_GP:HJH9165357.1;Name=HJH9165357.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462858.1;locus_tag=O5D79_003950;product=Sec-independent protein translocase subunit TatA;protein_id=HJH9165357.1;transl_table=11 DALFDJ020000024.1 tpg gene 15404 17044 . - . ID=gene-O5D79_003951;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=O5D79_003951 DALFDJ020000024.1 Protein Homology CDS 15404 17044 . - 0 ID=cds-HJH9165358.1;Parent=gene-O5D79_003951;Dbxref=NCBI_GP:HJH9165358.1;Name=HJH9165358.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462857.1;locus_tag=O5D79_003951;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=HJH9165358.1;transl_table=11 DALFDJ020000024.1 tpg gene 17041 17646 . - . ID=gene-O5D79_003952;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=O5D79_003952 DALFDJ020000024.1 Protein Homology CDS 17041 17646 . - 0 ID=cds-HJH9165359.1;Parent=gene-O5D79_003952;Dbxref=NCBI_GP:HJH9165359.1;Name=HJH9165359.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462856.1;locus_tag=O5D79_003952;product=ubiquinone biosynthesis protein UbiJ;protein_id=HJH9165359.1;transl_table=11 DALFDJ020000024.1 tpg gene 17656 18411 . - . ID=gene-O5D79_003953;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=O5D79_003953 DALFDJ020000024.1 Protein Homology CDS 17656 18411 . - 0 ID=cds-HJH9165360.1;Parent=gene-O5D79_003953;Dbxref=NCBI_GP:HJH9165360.1;Name=HJH9165360.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462855.1;locus_tag=O5D79_003953;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=HJH9165360.1;transl_table=11 DALFDJ020000024.1 tpg gene 18507 19937 . - . ID=gene-O5D79_003954;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=O5D79_003954 DALFDJ020000024.1 Protein Homology CDS 18507 19937 . - 0 ID=cds-HJH9165361.1;Parent=gene-O5D79_003954;Dbxref=NCBI_GP:HJH9165361.1;Name=HJH9165361.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462854.1;locus_tag=O5D79_003954;product=DNA recombination protein RmuC;protein_id=HJH9165361.1;transl_table=11 DALFDJ020000024.1 tpg gene 20077 20838 . - . ID=gene-O5D79_003955;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=O5D79_003955 DALFDJ020000024.1 Protein Homology CDS 20077 20838 . - 0 ID=cds-HJH9165362.1;Parent=gene-O5D79_003955;Dbxref=NCBI_GP:HJH9165362.1;Name=HJH9165362.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462853.1;locus_tag=O5D79_003955;product=uridine phosphorylase;protein_id=HJH9165362.1;transl_table=11 DALFDJ020000024.1 tpg gene 21097 21909 . + . ID=gene-O5D79_003956;Name=O5D79_003956;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003956 DALFDJ020000024.1 Protein Homology CDS 21097 21909 . + 0 ID=cds-HJH9165363.1;Parent=gene-O5D79_003956;Dbxref=NCBI_GP:HJH9165363.1;Name=HJH9165363.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001343535.1;locus_tag=O5D79_003956;product=dienelactone hydrolase family protein;protein_id=HJH9165363.1;transl_table=11 DALFDJ020000024.1 tpg gene 21989 23332 . - . ID=gene-O5D79_003957;Name=O5D79_003957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003957 DALFDJ020000024.1 Protein Homology CDS 21989 23332 . - 0 ID=cds-HJH9165364.1;Parent=gene-O5D79_003957;Dbxref=NCBI_GP:HJH9165364.1;Name=HJH9165364.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462851.1;locus_tag=O5D79_003957;product=anaerobic sulfatase maturase;protein_id=HJH9165364.1;transl_table=11 DALFDJ020000024.1 tpg gene 23676 25940 . - . ID=gene-O5D79_003958;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=O5D79_003958 DALFDJ020000024.1 Protein Homology CDS 23676 25940 . - 0 ID=cds-HJH9165365.1;Parent=gene-O5D79_003958;Dbxref=NCBI_GP:HJH9165365.1;Name=HJH9165365.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462850.1;locus_tag=O5D79_003958;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=HJH9165365.1;transl_table=11 DALFDJ020000024.1 tpg gene 26189 27142 . + . ID=gene-O5D79_003959;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=O5D79_003959 DALFDJ020000024.1 Protein Homology CDS 26189 27142 . + 0 ID=cds-HJH9165366.1;Parent=gene-O5D79_003959;Dbxref=NCBI_GP:HJH9165366.1;Name=HJH9165366.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462849.1;locus_tag=O5D79_003959;product=HTH-type transcriptional regulator MetR;protein_id=HJH9165366.1;transl_table=11 DALFDJ020000024.1 tpg gene 27030 27929 . - . ID=gene-O5D79_003960;Name=O5D79_003960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003960 DALFDJ020000024.1 Protein Homology CDS 27030 27929 . - 0 ID=cds-HJH9165367.1;Parent=gene-O5D79_003960;Dbxref=NCBI_GP:HJH9165367.1;Name=HJH9165367.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462848.1;locus_tag=O5D79_003960;product=carboxylate/amino acid/amine transporter;protein_id=HJH9165367.1;transl_table=11 DALFDJ020000024.1 tpg gene 28010 28810 . - . ID=gene-O5D79_003961;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=O5D79_003961 DALFDJ020000024.1 Protein Homology CDS 28010 28810 . - 0 ID=cds-HJH9165368.1;Parent=gene-O5D79_003961;Dbxref=NCBI_GP:HJH9165368.1;Name=HJH9165368.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462847.1;locus_tag=O5D79_003961;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=HJH9165368.1;transl_table=11 DALFDJ020000024.1 tpg gene 28826 29842 . - . ID=gene-O5D79_003962;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=O5D79_003962 DALFDJ020000024.1 Protein Homology CDS 28826 29842 . - 0 ID=cds-HJH9165369.1;Parent=gene-O5D79_003962;Dbxref=NCBI_GP:HJH9165369.1;Name=HJH9165369.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462846.1;locus_tag=O5D79_003962;product=lysophospholipase L2;protein_id=HJH9165369.1;transl_table=11 DALFDJ020000024.1 tpg gene 29953 30573 . + . ID=gene-O5D79_003963;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=O5D79_003963 DALFDJ020000024.1 Protein Homology CDS 29953 30573 . + 0 ID=cds-HJH9165370.1;Parent=gene-O5D79_003963;Dbxref=NCBI_GP:HJH9165370.1;Name=HJH9165370.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462845.1;locus_tag=O5D79_003963;product=homoserine/homoserine lactone efflux protein;protein_id=HJH9165370.1;transl_table=11 DALFDJ020000024.1 tpg gene 30613 31233 . - . ID=gene-O5D79_003964;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=O5D79_003964 DALFDJ020000024.1 Protein Homology CDS 30613 31233 . - 0 ID=cds-HJH9165371.1;Parent=gene-O5D79_003964;Dbxref=NCBI_GP:HJH9165371.1;Name=HJH9165371.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462844.1;locus_tag=O5D79_003964;product=threonine export protein RhtC;protein_id=HJH9165371.1;transl_table=11 DALFDJ020000024.1 tpg gene 31297 33126 . - . ID=gene-O5D79_003965;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=O5D79_003965 DALFDJ020000024.1 Protein Homology CDS 31297 33126 . - 0 ID=cds-HJH9165372.1;Parent=gene-O5D79_003965;Dbxref=NCBI_GP:HJH9165372.1;Name=HJH9165372.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=O5D79_003965;product=ATP-dependent DNA helicase RecQ;protein_id=HJH9165372.1;transl_table=11 DALFDJ020000024.1 tpg gene 33210 34079 . - . ID=gene-O5D79_003966;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=O5D79_003966 DALFDJ020000024.1 Protein Homology CDS 33210 34079 . - 0 ID=cds-HJH9165373.1;Parent=gene-O5D79_003966;Dbxref=NCBI_GP:HJH9165373.1;Name=HJH9165373.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462842.1;locus_tag=O5D79_003966;product=phospholipase A;protein_id=HJH9165373.1;transl_table=11 DALFDJ020000024.1 tpg gene 34244 34711 . + . ID=gene-O5D79_003967;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=O5D79_003967 DALFDJ020000024.1 Protein Homology CDS 34244 34711 . + 0 ID=cds-HJH9165374.1;Parent=gene-O5D79_003967;Dbxref=NCBI_GP:HJH9165374.1;Name=HJH9165374.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=O5D79_003967;product=acyl-CoA thioesterase YigI;protein_id=HJH9165374.1;transl_table=11 DALFDJ020000024.1 tpg gene 34755 35639 . + . ID=gene-O5D79_003968;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=O5D79_003968 DALFDJ020000024.1 Protein Homology CDS 34755 35639 . + 0 ID=cds-HJH9165375.1;Parent=gene-O5D79_003968;Dbxref=NCBI_GP:HJH9165375.1;Name=HJH9165375.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462840.1;locus_tag=O5D79_003968;product=EamA family transporter RarD;protein_id=HJH9165375.1;transl_table=11 DALFDJ020000024.1 tpg gene 35674 36132 . + . ID=gene-O5D79_003969;Name=O5D79_003969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003969 DALFDJ020000024.1 Protein Homology CDS 35674 36132 . + 0 ID=cds-HJH9165376.1;Parent=gene-O5D79_003969;Dbxref=NCBI_GP:HJH9165376.1;Name=HJH9165376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462839.1;locus_tag=O5D79_003969;product=hypothetical protein;protein_id=HJH9165376.1;transl_table=11 DALFDJ020000024.1 tpg gene 36148 36528 . + . ID=gene-O5D79_003970;Name=yigF;gbkey=Gene;gene=yigF;gene_biotype=protein_coding;locus_tag=O5D79_003970 DALFDJ020000024.1 Protein Homology CDS 36148 36528 . + 0 ID=cds-HJH9165377.1;Parent=gene-O5D79_003970;Dbxref=NCBI_GP:HJH9165377.1;Name=HJH9165377.1;gbkey=CDS;gene=yigF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462838.1;locus_tag=O5D79_003970;product=inner membrane protein YigF;protein_id=HJH9165377.1;transl_table=11 DALFDJ020000024.1 tpg gene 36577 37527 . - . ID=gene-O5D79_003971;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=O5D79_003971 DALFDJ020000024.1 Protein Homology CDS 36577 37527 . - 0 ID=cds-HJH9165378.1;Parent=gene-O5D79_003971;Dbxref=NCBI_GP:HJH9165378.1;Name=HJH9165378.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=O5D79_003971;product=magnesium/cobalt transporter CorA;protein_id=HJH9165378.1;transl_table=11 DALFDJ020000024.1 tpg gene 37683 37739 . - . ID=gene-O5D79_003972;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=O5D79_003972 DALFDJ020000024.1 Protein Homology CDS 37683 37739 . - 0 ID=cds-HJH9165379.1;Parent=gene-O5D79_003972;Dbxref=NCBI_GP:HJH9165379.1;Name=HJH9165379.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=O5D79_003972;product=protein YsgD;protein_id=HJH9165379.1;transl_table=11 DALFDJ020000024.1 tpg gene 37999 40161 . - . ID=gene-O5D79_003973;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=O5D79_003973 DALFDJ020000024.1 Protein Homology CDS 37999 40161 . - 0 ID=cds-HJH9165380.1;Parent=gene-O5D79_003973;Dbxref=NCBI_GP:HJH9165380.1;Name=HJH9165380.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462836.1;locus_tag=O5D79_003973;product=DNA helicase II;protein_id=HJH9165380.1;transl_table=11 DALFDJ020000024.1 tpg gene 40296 41012 . - . ID=gene-O5D79_003974;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=O5D79_003974 DALFDJ020000024.1 Protein Homology CDS 40296 41012 . - 0 ID=cds-HJH9165381.1;Parent=gene-O5D79_003974;Dbxref=NCBI_GP:HJH9165381.1;Name=HJH9165381.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462835.1;locus_tag=O5D79_003974;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=HJH9165381.1;transl_table=11 DALFDJ020000024.1 tpg gene 41012 41914 . - . ID=gene-O5D79_003975;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=O5D79_003975 DALFDJ020000024.1 Protein Homology CDS 41012 41914 . - 0 ID=cds-HJH9165382.1;Parent=gene-O5D79_003975;Dbxref=NCBI_GP:HJH9165382.1;Name=HJH9165382.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462834.1;locus_tag=O5D79_003975;product=tyrosine recombinase XerC;protein_id=HJH9165382.1;transl_table=11 DALFDJ020000024.1 tpg gene 41911 42618 . - . ID=gene-O5D79_003976;Name=O5D79_003976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003976 DALFDJ020000024.1 Protein Homology CDS 41911 42618 . - 0 ID=cds-HJH9165383.1;Parent=gene-O5D79_003976;Dbxref=NCBI_GP:HJH9165383.1;Name=HJH9165383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462833.1;locus_tag=O5D79_003976;product=DUF484 domain-containing protein;protein_id=HJH9165383.1;transl_table=11 DALFDJ020000024.1 tpg gene 42615 43439 . - . ID=gene-O5D79_003977;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=O5D79_003977 DALFDJ020000024.1 Protein Homology CDS 42615 43439 . - 0 ID=cds-HJH9165384.1;Parent=gene-O5D79_003977;Dbxref=NCBI_GP:HJH9165384.1;Name=HJH9165384.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=O5D79_003977;product=diaminopimelate epimerase;protein_id=HJH9165384.1;transl_table=11 DALFDJ020000024.1 tpg gene 43476 43679 . - . ID=gene-O5D79_003978;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=O5D79_003978 DALFDJ020000024.1 Protein Homology CDS 43476 43679 . - 0 ID=cds-HJH9165385.1;Parent=gene-O5D79_003978;Dbxref=NCBI_GP:HJH9165385.1;Name=HJH9165385.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462831.1;locus_tag=O5D79_003978;product=LPS translocon maturation chaperone LptM;protein_id=HJH9165385.1;transl_table=11 DALFDJ020000024.1 tpg gene 43865 45868 . + . ID=gene-O5D79_003979;Name=O5D79_003979;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003979 DALFDJ020000024.1 Protein Homology CDS 43865 45868 . + 0 ID=cds-HJH9165386.1;Parent=gene-O5D79_003979;Dbxref=NCBI_GP:HJH9165386.1;Name=HJH9165386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200018.1;locus_tag=O5D79_003979;product=hypothetical protein;protein_id=HJH9165386.1;transl_table=11 DALFDJ020000024.1 tpg gene 45856 46245 . + . ID=gene-O5D79_003980;Name=O5D79_003980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003980 DALFDJ020000024.1 Protein Homology CDS 45856 46245 . + 0 ID=cds-HJH9165387.1;Parent=gene-O5D79_003980;Dbxref=NCBI_GP:HJH9165387.1;Name=HJH9165387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462830.1;locus_tag=O5D79_003980;product=DUF3021 family protein;protein_id=HJH9165387.1;transl_table=11 DALFDJ020000024.1 tpg gene 46315 46635 . + . ID=gene-O5D79_003981;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=O5D79_003981 DALFDJ020000024.1 Protein Homology CDS 46315 46635 . + 0 ID=cds-HJH9165388.1;Parent=gene-O5D79_003981;Dbxref=NCBI_GP:HJH9165388.1;Name=HJH9165388.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=O5D79_003981;product=iron donor protein CyaY;protein_id=HJH9165388.1;transl_table=11 DALFDJ020000024.1 tpg gene 46706 47068 . - . ID=gene-O5D79_003982;Name=O5D79_003982;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003982 DALFDJ020000024.1 Protein Homology CDS 46706 47068 . - 0 ID=cds-HJH9165389.1;Parent=gene-O5D79_003982;Dbxref=NCBI_GP:HJH9165389.1;Name=HJH9165389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462828.1;locus_tag=O5D79_003982;product=hypothetical protein;protein_id=HJH9165389.1;transl_table=11 DALFDJ020000024.1 tpg gene 47080 47622 . - . ID=gene-O5D79_003983;Name=O5D79_003983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003983 DALFDJ020000024.1 Protein Homology CDS 47080 47622 . - 0 ID=cds-HJH9165390.1;Parent=gene-O5D79_003983;Dbxref=NCBI_GP:HJH9165390.1;Name=HJH9165390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462827.1;locus_tag=O5D79_003983;product=STM3941 family protein;protein_id=HJH9165390.1;transl_table=11 DALFDJ020000024.1 tpg gene 47808 48161 . - . ID=gene-O5D79_003984;Name=O5D79_003984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003984 DALFDJ020000024.1 Protein Homology CDS 47808 48161 . - 0 ID=cds-HJH9165391.1;Parent=gene-O5D79_003984;Dbxref=NCBI_GP:HJH9165391.1;Name=HJH9165391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462826.1;locus_tag=O5D79_003984;product=hypothetical protein;protein_id=HJH9165391.1;transl_table=11 DALFDJ020000024.1 tpg gene 48269 50815 . - . ID=gene-O5D79_003985;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=O5D79_003985 DALFDJ020000024.1 Protein Homology CDS 48269 50815 . - 0 ID=cds-HJH9165392.1;Parent=gene-O5D79_003985;Dbxref=NCBI_GP:HJH9165392.1;Name=HJH9165392.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462825.1;locus_tag=O5D79_003985;product=class I adenylate cyclase;protein_id=HJH9165392.1;transl_table=11 DALFDJ020000024.1 tpg gene 51192 52133 . + . ID=gene-O5D79_003986;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=O5D79_003986 DALFDJ020000024.1 Protein Homology CDS 51192 52133 . + 0 ID=cds-HJH9165393.1;Parent=gene-O5D79_003986;Dbxref=NCBI_GP:HJH9165393.1;Name=HJH9165393.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=O5D79_003986;product=hydroxymethylbilane synthase;protein_id=HJH9165393.1;transl_table=11 DALFDJ020000024.1 tpg gene 52130 52870 . + . ID=gene-O5D79_003987;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=O5D79_003987 DALFDJ020000024.1 Protein Homology CDS 52130 52870 . + 0 ID=cds-HJH9165394.1;Parent=gene-O5D79_003987;Dbxref=NCBI_GP:HJH9165394.1;Name=HJH9165394.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=O5D79_003987;product=uroporphyrinogen-III synthase;protein_id=HJH9165394.1;transl_table=11 DALFDJ020000024.1 tpg gene 52892 54061 . + . ID=gene-O5D79_003988;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=O5D79_003988 DALFDJ020000024.1 Protein Homology CDS 52892 54061 . + 0 ID=cds-HJH9165395.1;Parent=gene-O5D79_003988;Dbxref=NCBI_GP:HJH9165395.1;Name=HJH9165395.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462822.1;locus_tag=O5D79_003988;product=uroporphyrinogen-III C-methyltransferase;protein_id=HJH9165395.1;transl_table=11 DALFDJ020000024.1 tpg gene 54064 55260 . + . ID=gene-O5D79_003989;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=O5D79_003989 DALFDJ020000024.1 Protein Homology CDS 54064 55260 . + 0 ID=cds-HJH9165396.1;Parent=gene-O5D79_003989;Dbxref=NCBI_GP:HJH9165396.1;Name=HJH9165396.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=O5D79_003989;product=protoheme IX biogenesis protein HemY;protein_id=HJH9165396.1;transl_table=11 DALFDJ020000024.1 tpg gene 55841 55917 . - . ID=gene-O5D79_003990;Name=O5D79_003990;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_003990 DALFDJ020000024.1 tRNAscan-SE tRNA 55841 55917 . - . ID=rna-O5D79_003990;Parent=gene-O5D79_003990;anticodon=(pos:complement(55881..55883));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003990;product=tRNA-Pro DALFDJ020000024.1 tRNAscan-SE exon 55841 55917 . - . ID=exon-O5D79_003990-1;Parent=rna-O5D79_003990;anticodon=(pos:complement(55881..55883));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003990;product=tRNA-Pro DALFDJ020000024.1 tpg gene 55960 56046 . - . ID=gene-O5D79_003991;Name=O5D79_003991;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_003991 DALFDJ020000024.1 tRNAscan-SE tRNA 55960 56046 . - . ID=rna-O5D79_003991;Parent=gene-O5D79_003991;anticodon=(pos:complement(56010..56012));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003991;product=tRNA-Leu DALFDJ020000024.1 tRNAscan-SE exon 55960 56046 . - . ID=exon-O5D79_003991-1;Parent=rna-O5D79_003991;anticodon=(pos:complement(56010..56012));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003991;product=tRNA-Leu DALFDJ020000024.1 tpg gene 56067 56142 . - . ID=gene-O5D79_003992;Name=O5D79_003992;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_003992 DALFDJ020000024.1 tRNAscan-SE tRNA 56067 56142 . - . ID=rna-O5D79_003992;Parent=gene-O5D79_003992;anticodon=(pos:complement(56107..56109));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003992;product=tRNA-His DALFDJ020000024.1 tRNAscan-SE exon 56067 56142 . - . ID=exon-O5D79_003992-1;Parent=rna-O5D79_003992;anticodon=(pos:complement(56107..56109));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003992;product=tRNA-His DALFDJ020000024.1 tpg gene 56197 56273 . - . ID=gene-O5D79_003993;Name=O5D79_003993;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_003993 DALFDJ020000024.1 tRNAscan-SE tRNA 56197 56273 . - . ID=rna-O5D79_003993;Parent=gene-O5D79_003993;anticodon=(pos:complement(56237..56239));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003993;product=tRNA-Arg DALFDJ020000024.1 tRNAscan-SE exon 56197 56273 . - . ID=exon-O5D79_003993-1;Parent=rna-O5D79_003993;anticodon=(pos:complement(56237..56239));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_003993;product=tRNA-Arg DALFDJ020000024.1 tpg gene 56376 57761 . - . ID=gene-O5D79_003994;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=O5D79_003994 DALFDJ020000024.1 Protein Homology CDS 56376 57761 . - 0 ID=cds-HJH9165397.1;Parent=gene-O5D79_003994;Dbxref=NCBI_GP:HJH9165397.1;Name=HJH9165397.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462820.1;locus_tag=O5D79_003994;product=bifunctional threonine/serine APC transporter ThrP;protein_id=HJH9165397.1;transl_table=11 DALFDJ020000024.1 tpg gene 57968 58708 . - . ID=gene-O5D79_003995;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=O5D79_003995 DALFDJ020000024.1 Protein Homology CDS 57968 58708 . - 0 ID=cds-HJH9165398.1;Parent=gene-O5D79_003995;Dbxref=NCBI_GP:HJH9165398.1;Name=HJH9165398.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462819.1;locus_tag=O5D79_003995;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=HJH9165398.1;transl_table=11 DALFDJ020000024.1 tpg gene 58705 60063 . - . ID=gene-O5D79_003996;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=O5D79_003996 DALFDJ020000024.1 Protein Homology CDS 58705 60063 . - 0 ID=cds-HJH9165399.1;Parent=gene-O5D79_003996;Dbxref=NCBI_GP:HJH9165399.1;Name=HJH9165399.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462818.1;locus_tag=O5D79_003996;product=ECA oligosaccharide polymerase;protein_id=HJH9165399.1;transl_table=11 DALFDJ020000024.1 tpg gene 60060 61139 . - . ID=gene-O5D79_003997;Name=O5D79_003997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_003997 DALFDJ020000024.1 Protein Homology CDS 60060 61139 . - 0 ID=cds-HJH9165400.1;Parent=gene-O5D79_003997;Dbxref=NCBI_GP:HJH9165400.1;Name=HJH9165400.1;Ontology_term=GO:0036065,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=fucosylation|0036065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462817.1;locus_tag=O5D79_003997;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=HJH9165400.1;transl_table=11 DALFDJ020000024.1 tpg gene 61136 62386 . - . ID=gene-O5D79_003998;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=O5D79_003998 DALFDJ020000024.1 Protein Homology CDS 61136 62386 . - 0 ID=cds-HJH9165401.1;Parent=gene-O5D79_003998;Dbxref=NCBI_GP:HJH9165401.1;Name=HJH9165401.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=O5D79_003998;product=lipid III flippase WzxE;protein_id=HJH9165401.1;transl_table=11 DALFDJ020000024.1 tpg gene 62388 63518 . - . ID=gene-O5D79_003999;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=O5D79_003999 DALFDJ020000024.1 Protein Homology CDS 62388 63518 . - 0 ID=cds-HJH9165402.1;Parent=gene-O5D79_003999;Dbxref=NCBI_GP:HJH9165402.1;Name=HJH9165402.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462815.1;locus_tag=O5D79_003999;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=HJH9165402.1;transl_table=11 DALFDJ020000024.1 tpg gene 63523 64200 . - . ID=gene-O5D79_004000;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=O5D79_004000 DALFDJ020000024.1 Protein Homology CDS 63523 64200 . - 0 ID=cds-HJH9165403.1;Parent=gene-O5D79_004000;Dbxref=NCBI_GP:HJH9165403.1;Name=HJH9165403.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=O5D79_004000;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=HJH9165403.1;transl_table=11 DALFDJ020000024.1 tpg gene 64178 64492 . - . ID=gene-O5D79_004001;Name=O5D79_004001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004001 DALFDJ020000024.1 Protein Homology CDS 64178 64492 . - 0 ID=cds-HJH9165404.1;Parent=gene-O5D79_004001;Dbxref=NCBI_GP:HJH9165404.1;Name=HJH9165404.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=O5D79_004001;product=sugar phosphate nucleotidyltransferase;protein_id=HJH9165404.1;transl_table=11 DALFDJ020000024.1 tpg gene 64435 65502 . - . ID=gene-O5D79_004002;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=O5D79_004002 DALFDJ020000024.1 Protein Homology CDS 64435 65502 . - 0 ID=cds-HJH9165405.1;Parent=gene-O5D79_004002;Dbxref=NCBI_GP:HJH9165405.1;Name=HJH9165405.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462812.1;locus_tag=O5D79_004002;product=dTDP-glucose 4%2C6-dehydratase;protein_id=HJH9165405.1;transl_table=11 DALFDJ020000024.1 tpg gene 65502 66764 . - . ID=gene-O5D79_004003;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=O5D79_004003 DALFDJ020000024.1 Protein Homology CDS 65502 66764 . - 0 ID=cds-HJH9165406.1;Parent=gene-O5D79_004003;Dbxref=NCBI_GP:HJH9165406.1;Name=HJH9165406.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462811.1;locus_tag=O5D79_004003;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=HJH9165406.1;transl_table=11 DALFDJ020000024.1 tpg gene 66761 67891 . - . ID=gene-O5D79_004004;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=O5D79_004004 DALFDJ020000024.1 Protein Homology CDS 66761 67891 . - 0 ID=cds-HJH9165407.1;Parent=gene-O5D79_004004;Dbxref=NCBI_GP:HJH9165407.1;Name=HJH9165407.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=O5D79_004004;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=HJH9165407.1;transl_table=11 DALFDJ020000024.1 tpg gene 67947 68993 . - . ID=gene-O5D79_004005;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=O5D79_004005 DALFDJ020000024.1 Protein Homology CDS 67947 68993 . - 0 ID=cds-HJH9165408.1;Parent=gene-O5D79_004005;Dbxref=NCBI_GP:HJH9165408.1;Name=HJH9165408.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=O5D79_004005;product=ECA polysaccharide chain length modulation protein;protein_id=HJH9165408.1;transl_table=11 DALFDJ020000024.1 tpg gene 69005 70108 . - . ID=gene-O5D79_004006;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=O5D79_004006 DALFDJ020000024.1 Protein Homology CDS 69005 70108 . - 0 ID=cds-HJH9165409.1;Parent=gene-O5D79_004006;Dbxref=NCBI_GP:HJH9165409.1;Name=HJH9165409.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462808.1;locus_tag=O5D79_004006;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=HJH9165409.1;transl_table=11 DALFDJ020000024.1 tpg gene 70338 71597 . - . ID=gene-O5D79_004007;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=O5D79_004007 DALFDJ020000024.1 Protein Homology CDS 70338 71597 . - 0 ID=cds-HJH9165410.1;Parent=gene-O5D79_004007;Dbxref=NCBI_GP:HJH9165410.1;Name=HJH9165410.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=O5D79_004007;product=transcription termination factor Rho;protein_id=HJH9165410.1;transl_table=11 DALFDJ020000024.1 tpg gene 71685 71768 . - . ID=gene-O5D79_004008;Name=O5D79_004008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004008 DALFDJ020000024.1 Protein Homology CDS 71685 71768 . - 0 ID=cds-HJH9165411.1;Parent=gene-O5D79_004008;Dbxref=NCBI_GP:HJH9165411.1;Name=HJH9165411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=O5D79_004008;product=rho operon leader peptide;protein_id=HJH9165411.1;transl_table=11 DALFDJ020000024.1 tpg gene 72016 72345 . - . ID=gene-O5D79_004009;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=O5D79_004009 DALFDJ020000024.1 Protein Homology CDS 72016 72345 . - 0 ID=cds-HJH9165412.1;Parent=gene-O5D79_004009;Dbxref=NCBI_GP:HJH9165412.1;Name=HJH9165412.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=O5D79_004009;product=thioredoxin TrxA;protein_id=HJH9165412.1;transl_table=11 DALFDJ020000024.1 tpg gene 72489 73754 . + . ID=gene-O5D79_004010;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=O5D79_004010 DALFDJ020000024.1 Protein Homology CDS 72489 73754 . + 0 ID=cds-HJH9165413.1;Parent=gene-O5D79_004010;Dbxref=NCBI_GP:HJH9165413.1;Name=HJH9165413.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462805.1;locus_tag=O5D79_004010;product=ATP-dependent RNA helicase RhlB;protein_id=HJH9165413.1;transl_table=11 DALFDJ020000024.1 tpg gene 73873 75354 . + . ID=gene-O5D79_004011;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=O5D79_004011 DALFDJ020000024.1 Protein Homology CDS 73873 75354 . + 0 ID=cds-HJH9165414.1;Parent=gene-O5D79_004011;Dbxref=NCBI_GP:HJH9165414.1;Name=HJH9165414.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462804.1;locus_tag=O5D79_004011;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=HJH9165414.1;transl_table=11 DALFDJ020000024.1 tpg gene 75394 77418 . - . ID=gene-O5D79_004012;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=O5D79_004012 DALFDJ020000024.1 Protein Homology CDS 75394 77418 . - 0 ID=cds-HJH9165415.1;Parent=gene-O5D79_004012;Dbxref=NCBI_GP:HJH9165415.1;Name=HJH9165415.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462803.1;locus_tag=O5D79_004012;product=DNA helicase Rep;protein_id=HJH9165415.1;transl_table=11 DALFDJ020000024.1 tpg pseudogene 77518 77655 . - . ID=gene-O5D79_004013;Name=O5D79_004013;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004013;pseudo=true DALFDJ020000024.1 Protein Homology CDS 77518 77655 . - 0 ID=cds-O5D79_004013;Parent=gene-O5D79_004013;Note=involved in nicotinamide riboside transport%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506088.1;locus_tag=O5D79_004013;product=nicotinamide riboside transporter PnuC;pseudo=true;transl_table=11 DALFDJ020000024.1 tpg pseudogene 77607 77762 . - . ID=gene-O5D79_004014;Name=O5D79_004014;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004014;pseudo=true DALFDJ020000024.1 Protein Homology CDS 77607 77762 . - 0 ID=cds-O5D79_004014;Parent=gene-O5D79_004014;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442089.1;locus_tag=O5D79_004014;product=Crp/Fnr family transcriptional regulator;pseudo=true;transl_table=11 DALFDJ020000024.1 tpg gene 77956 78237 . + . ID=gene-O5D79_004015;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=O5D79_004015 DALFDJ020000024.1 Protein Homology CDS 77956 78237 . + 0 ID=cds-HJH9165416.1;Parent=gene-O5D79_004015;Dbxref=NCBI_GP:HJH9165416.1;Name=HJH9165416.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462801.1;locus_tag=O5D79_004015;product=peptidylprolyl isomerase PpiC;protein_id=HJH9165416.1;transl_table=11 DALFDJ020000024.1 tpg gene 78329 79804 . - . ID=gene-O5D79_004016;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=O5D79_004016 DALFDJ020000024.1 Protein Homology CDS 78329 79804 . - 0 ID=cds-HJH9165417.1;Parent=gene-O5D79_004016;Dbxref=NCBI_GP:HJH9165417.1;Name=HJH9165417.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=O5D79_004016;product=ketol-acid reductoisomerase;protein_id=HJH9165417.1;transl_table=11 DALFDJ020000024.1 tpg gene 79969 80856 . + . ID=gene-O5D79_004017;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=O5D79_004017 DALFDJ020000024.1 Protein Homology CDS 79969 80856 . + 0 ID=cds-HJH9165418.1;Parent=gene-O5D79_004017;Dbxref=NCBI_GP:HJH9165418.1;Name=HJH9165418.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462799.1;locus_tag=O5D79_004017;product=HTH-type transcriptional activator IlvY;protein_id=HJH9165418.1;transl_table=11 DALFDJ020000024.1 tpg gene 80859 81200 . - . ID=gene-O5D79_004018;Name=O5D79_004018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004018 DALFDJ020000024.1 Protein Homology CDS 80859 81200 . - 0 ID=cds-HJH9165419.1;Parent=gene-O5D79_004018;Dbxref=NCBI_GP:HJH9165419.1;Name=HJH9165419.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462798.1;locus_tag=O5D79_004018;product=helix-turn-helix domain-containing protein;protein_id=HJH9165419.1;transl_table=11 DALFDJ020000024.1 tpg gene 81197 81514 . - . ID=gene-O5D79_004019;Name=O5D79_004019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004019 DALFDJ020000024.1 Protein Homology CDS 81197 81514 . - 0 ID=cds-HJH9165420.1;Parent=gene-O5D79_004019;Dbxref=NCBI_GP:HJH9165420.1;Name=HJH9165420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462797.1;locus_tag=O5D79_004019;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=HJH9165420.1;transl_table=11 DALFDJ020000024.1 tpg gene 81797 83341 . - . ID=gene-O5D79_004020;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=O5D79_004020 DALFDJ020000024.1 Protein Homology CDS 81797 83341 . - 0 ID=cds-HJH9165421.1;Parent=gene-O5D79_004020;Dbxref=NCBI_GP:HJH9165421.1;Name=HJH9165421.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462796.1;locus_tag=O5D79_004020;product=threonine ammonia-lyase%2C biosynthetic;protein_id=HJH9165421.1;transl_table=11 DALFDJ020000024.1 tpg gene 83344 85194 . - . ID=gene-O5D79_004021;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=O5D79_004021 DALFDJ020000024.1 Protein Homology CDS 83344 85194 . - 0 ID=cds-HJH9165422.1;Parent=gene-O5D79_004021;Dbxref=NCBI_GP:HJH9165422.1;Name=HJH9165422.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=O5D79_004021;product=dihydroxy-acid dehydratase;protein_id=HJH9165422.1;transl_table=11 DALFDJ020000024.1 tpg gene 85354 86283 . - . ID=gene-O5D79_004022;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=O5D79_004022 DALFDJ020000024.1 Protein Homology CDS 85354 86283 . - 0 ID=cds-HJH9165423.1;Parent=gene-O5D79_004022;Dbxref=NCBI_GP:HJH9165423.1;Name=HJH9165423.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462794.1;locus_tag=O5D79_004022;product=branched-chain-amino-acid transaminase;protein_id=HJH9165423.1;transl_table=11 DALFDJ020000024.1 tpg gene 86301 86564 . - . ID=gene-O5D79_004023;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=O5D79_004023 DALFDJ020000024.1 Protein Homology CDS 86301 86564 . - 0 ID=cds-HJH9165424.1;Parent=gene-O5D79_004023;Dbxref=NCBI_GP:HJH9165424.1;Name=HJH9165424.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=O5D79_004023;product=acetolactate synthase 2 small subunit;protein_id=HJH9165424.1;transl_table=11 DALFDJ020000024.1 tpg gene 86561 88207 . - . ID=gene-O5D79_004024;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=O5D79_004024 DALFDJ020000024.1 Protein Homology CDS 86561 88207 . - 0 ID=cds-HJH9165425.1;Parent=gene-O5D79_004024;Dbxref=NCBI_GP:HJH9165425.1;Name=HJH9165425.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=O5D79_004024;product=acetolactate synthase 2 catalytic subunit;protein_id=HJH9165425.1;transl_table=11 DALFDJ020000024.1 tpg gene 88210 88260 . - . ID=gene-O5D79_004025;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=O5D79_004025 DALFDJ020000024.1 Protein Homology CDS 88210 88260 . - 0 ID=cds-HJH9165426.1;Parent=gene-O5D79_004025;Dbxref=NCBI_GP:HJH9165426.1;Name=HJH9165426.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: protein motif:HMM:NF038286.1;locus_tag=O5D79_004025;product=peptide IlvX;protein_id=HJH9165426.1;transl_table=11 DALFDJ020000024.1 tpg gene 88347 88445 . - . ID=gene-O5D79_004026;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=O5D79_004026 DALFDJ020000024.1 Protein Homology CDS 88347 88445 . - 0 ID=cds-HJH9165427.1;Parent=gene-O5D79_004026;Dbxref=NCBI_GP:HJH9165427.1;Name=HJH9165427.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=O5D79_004026;product=ilv operon leader peptide;protein_id=HJH9165427.1;transl_table=11 DALFDJ020000024.1 tpg gene 88797 90317 . + . ID=gene-O5D79_004027;Name=O5D79_004027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004027 DALFDJ020000024.1 Protein Homology CDS 88797 90317 . + 0 ID=cds-HJH9165428.1;Parent=gene-O5D79_004027;Dbxref=NCBI_GP:HJH9165428.1;Name=HJH9165428.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=O5D79_004027;product=YifB family Mg chelatase-like AAA ATPase;protein_id=HJH9165428.1;transl_table=11 DALFDJ020000024.1 tpg gene 90342 90680 . - . ID=gene-O5D79_004028;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=O5D79_004028 DALFDJ020000024.1 Protein Homology CDS 90342 90680 . - 0 ID=cds-HJH9165429.1;Parent=gene-O5D79_004028;Dbxref=NCBI_GP:HJH9165429.1;Name=HJH9165429.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462789.1;locus_tag=O5D79_004028;product=macrodomain Ori organization protein MaoP;protein_id=HJH9165429.1;transl_table=11 DALFDJ020000024.1 tpg gene 90787 91635 . + . ID=gene-O5D79_004029;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=O5D79_004029 DALFDJ020000024.1 Protein Homology CDS 90787 91635 . + 0 ID=cds-HJH9165430.1;Parent=gene-O5D79_004029;Dbxref=NCBI_GP:HJH9165430.1;Name=HJH9165430.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462788.3;locus_tag=O5D79_004029;product=HTH-type transcriptional regulator HdfR;protein_id=HJH9165430.1;transl_table=11 DALFDJ020000024.1 tpg gene 91737 91812 . - . ID=gene-O5D79_004030;Name=O5D79_004030;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_004030 DALFDJ020000024.1 tRNAscan-SE tRNA 91737 91812 . - . ID=rna-O5D79_004030;Parent=gene-O5D79_004030;anticodon=(pos:complement(91777..91779));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004030;product=tRNA-Trp DALFDJ020000024.1 tRNAscan-SE exon 91737 91812 . - . ID=exon-O5D79_004030-1;Parent=rna-O5D79_004030;anticodon=(pos:complement(91777..91779));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004030;product=tRNA-Trp DALFDJ020000024.1 tpg gene 91821 91897 . - . ID=gene-O5D79_004031;Name=O5D79_004031;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_004031 DALFDJ020000024.1 tRNAscan-SE tRNA 91821 91897 . - . ID=rna-O5D79_004031;Parent=gene-O5D79_004031;anticodon=(pos:complement(91861..91863));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004031;product=tRNA-Asp DALFDJ020000024.1 tRNAscan-SE exon 91821 91897 . - . ID=exon-O5D79_004031-1;Parent=rna-O5D79_004031;anticodon=(pos:complement(91861..91863));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004031;product=tRNA-Asp DALFDJ020000024.1 tpg gene 91952 92067 . - . ID=gene-O5D79_004032;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=O5D79_004032 DALFDJ020000024.1 cmsearch rRNA 91952 92067 . - . ID=rna-O5D79_004032;Parent=gene-O5D79_004032;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_004032;product=5S ribosomal RNA DALFDJ020000024.1 cmsearch exon 91952 92067 . - . ID=exon-O5D79_004032-1;Parent=rna-O5D79_004032;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_004032;product=5S ribosomal RNA ##sequence-region DALFDJ020000025.1 1 88874 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000025.1 tpg region 1 88874 . + . ID=DALFDJ020000025.1:1..88874;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000025.1 tpg gene 245 1354 . + . ID=gene-O5D79_004033;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=O5D79_004033 DALFDJ020000025.1 Protein Homology CDS 245 1354 . + 0 ID=cds-HJH9165431.1;Parent=gene-O5D79_004033;Dbxref=NCBI_GP:HJH9165431.1;Name=HJH9165431.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=O5D79_004033;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=HJH9165431.1;transl_table=11 DALFDJ020000025.1 tpg gene 1443 2801 . + . ID=gene-O5D79_004034;Name=O5D79_004034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004034 DALFDJ020000025.1 Protein Homology CDS 1443 2801 . + 0 ID=cds-HJH9165432.1;Parent=gene-O5D79_004034;Dbxref=NCBI_GP:HJH9165432.1;Name=HJH9165432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463096.1;locus_tag=O5D79_004034;product=maltoporin;protein_id=HJH9165432.1;transl_table=11 DALFDJ020000025.1 tpg gene 2965 3882 . + . ID=gene-O5D79_004035;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=O5D79_004035 DALFDJ020000025.1 Protein Homology CDS 2965 3882 . + 0 ID=cds-HJH9165433.1;Parent=gene-O5D79_004035;Dbxref=NCBI_GP:HJH9165433.1;Name=HJH9165433.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463097.1;locus_tag=O5D79_004035;product=maltose operon protein MalM;protein_id=HJH9165433.1;transl_table=11 DALFDJ020000025.1 tpg gene 4064 4561 . + . ID=gene-O5D79_004036;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=O5D79_004036 DALFDJ020000025.1 Protein Homology CDS 4064 4561 . + 0 ID=cds-HJH9165434.1;Parent=gene-O5D79_004036;Dbxref=NCBI_GP:HJH9165434.1;Name=HJH9165434.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463098.1;locus_tag=O5D79_004036;product=chorismate lyase;protein_id=HJH9165434.1;transl_table=11 DALFDJ020000025.1 tpg gene 4575 5447 . + . ID=gene-O5D79_004037;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=O5D79_004037 DALFDJ020000025.1 Protein Homology CDS 4575 5447 . + 0 ID=cds-HJH9165435.1;Parent=gene-O5D79_004037;Dbxref=NCBI_GP:HJH9165435.1;Name=HJH9165435.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132667.1;locus_tag=O5D79_004037;product=4-hydroxybenzoate octaprenyltransferase;protein_id=HJH9165435.1;transl_table=11 DALFDJ020000025.1 tpg gene 5546 7966 . - . ID=gene-O5D79_004038;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=O5D79_004038 DALFDJ020000025.1 Protein Homology CDS 5546 7966 . - 0 ID=cds-HJH9165436.1;Parent=gene-O5D79_004038;Dbxref=NCBI_GP:HJH9165436.1;Name=HJH9165436.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=O5D79_004038;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=HJH9165436.1;transl_table=11 DALFDJ020000025.1 tpg gene 8137 8505 . + . ID=gene-O5D79_004039;Name=O5D79_004039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004039 DALFDJ020000025.1 Protein Homology CDS 8137 8505 . + 0 ID=cds-HJH9165437.1;Parent=gene-O5D79_004039;Dbxref=NCBI_GP:HJH9165437.1;Name=HJH9165437.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872;gbkey=CDS;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463101.1;locus_tag=O5D79_004039;product=diacylglycerol kinase;protein_id=HJH9165437.1;transl_table=11 DALFDJ020000025.1 tpg gene 8614 9222 . + . ID=gene-O5D79_004040;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=O5D79_004040 DALFDJ020000025.1 Protein Homology CDS 8614 9222 . + 0 ID=cds-HJH9165438.1;Parent=gene-O5D79_004040;Dbxref=NCBI_GP:HJH9165438.1;Name=HJH9165438.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=O5D79_004040;product=transcriptional repressor LexA;protein_id=HJH9165438.1;transl_table=11 DALFDJ020000025.1 tpg gene 9401 10726 . + . ID=gene-O5D79_004041;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=O5D79_004041 DALFDJ020000025.1 Protein Homology CDS 9401 10726 . + 0 ID=cds-HJH9165439.1;Parent=gene-O5D79_004041;Dbxref=NCBI_GP:HJH9165439.1;Name=HJH9165439.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463103.1;locus_tag=O5D79_004041;product=MATE family efflux transporter DinF;protein_id=HJH9165439.1;transl_table=11 DALFDJ020000025.1 tpg gene 10723 10836 . + . ID=gene-O5D79_004042;Name=O5D79_004042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004042 DALFDJ020000025.1 Protein Homology CDS 10723 10836 . + 0 ID=cds-HJH9165440.1;Parent=gene-O5D79_004042;Dbxref=NCBI_GP:HJH9165440.1;Name=HJH9165440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463104.1;locus_tag=O5D79_004042;product=hypothetical protein;protein_id=HJH9165440.1;transl_table=11 DALFDJ020000025.1 tpg gene 10858 11067 . + . ID=gene-O5D79_004043;Name=O5D79_004043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004043 DALFDJ020000025.1 Protein Homology CDS 10858 11067 . + 0 ID=cds-HJH9165441.1;Parent=gene-O5D79_004043;Dbxref=NCBI_GP:HJH9165441.1;Name=HJH9165441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=O5D79_004043;product=CsbD family protein;protein_id=HJH9165441.1;transl_table=11 DALFDJ020000025.1 tpg gene 11166 11681 . - . ID=gene-O5D79_004044;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=O5D79_004044 DALFDJ020000025.1 Protein Homology CDS 11166 11681 . - 0 ID=cds-HJH9165442.1;Parent=gene-O5D79_004044;Dbxref=NCBI_GP:HJH9165442.1;Name=HJH9165442.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463106.1;locus_tag=O5D79_004044;product=zinc uptake transcriptional repressor Zur;protein_id=HJH9165442.1;transl_table=11 DALFDJ020000025.1 tpg gene 11928 13238 . + . ID=gene-O5D79_004045;Name=O5D79_004045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004045 DALFDJ020000025.1 Protein Homology CDS 11928 13238 . + 0 ID=cds-HJH9165443.1;Parent=gene-O5D79_004045;Dbxref=NCBI_GP:HJH9165443.1;Name=HJH9165443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=O5D79_004045;product=conjugal transfer protein TraF;protein_id=HJH9165443.1;transl_table=11 DALFDJ020000025.1 tpg gene 13326 14324 . + . ID=gene-O5D79_004046;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=O5D79_004046 DALFDJ020000025.1 Protein Homology CDS 13326 14324 . + 0 ID=cds-HJH9165444.1;Parent=gene-O5D79_004046;Dbxref=NCBI_GP:HJH9165444.1;Name=HJH9165444.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463108.1;locus_tag=O5D79_004046;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=HJH9165444.1;transl_table=11 DALFDJ020000025.1 tpg gene 14492 14734 . + . ID=gene-O5D79_004047;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=O5D79_004047 DALFDJ020000025.1 Protein Homology CDS 14492 14734 . + 0 ID=cds-HJH9165445.1;Parent=gene-O5D79_004047;Dbxref=NCBI_GP:HJH9165445.1;Name=HJH9165445.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463109.1;locus_tag=O5D79_004047;product=envelope stress response protein PspG;protein_id=HJH9165445.1;transl_table=11 DALFDJ020000025.1 tpg gene 14909 15892 . - . ID=gene-O5D79_004048;Name=O5D79_004048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004048 DALFDJ020000025.1 Protein Homology CDS 14909 15892 . - 0 ID=cds-HJH9165446.1;Parent=gene-O5D79_004048;Dbxref=NCBI_GP:HJH9165446.1;Name=HJH9165446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463110.1;locus_tag=O5D79_004048;product=quinone oxidoreductase;protein_id=HJH9165446.1;transl_table=11 DALFDJ020000025.1 tpg gene 15957 17372 . + . ID=gene-O5D79_004049;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=O5D79_004049 DALFDJ020000025.1 Protein Homology CDS 15957 17372 . + 0 ID=cds-HJH9165447.1;Parent=gene-O5D79_004049;Dbxref=NCBI_GP:HJH9165447.1;Name=HJH9165447.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463111.1;locus_tag=O5D79_004049;product=replicative DNA helicase;protein_id=HJH9165447.1;transl_table=11 DALFDJ020000025.1 tpg gene 17404 18483 . + . ID=gene-O5D79_004050;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=O5D79_004050 DALFDJ020000025.1 Protein Homology CDS 17404 18483 . + 0 ID=cds-HJH9165448.1;Parent=gene-O5D79_004050;Dbxref=NCBI_GP:HJH9165448.1;Name=HJH9165448.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463112.1;locus_tag=O5D79_004050;product=alanine racemase;protein_id=HJH9165448.1;transl_table=11 DALFDJ020000025.1 tpg gene 18669 19862 . + . ID=gene-O5D79_004051;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=O5D79_004051 DALFDJ020000025.1 Protein Homology CDS 18669 19862 . + 0 ID=cds-HJH9165449.1;Parent=gene-O5D79_004051;Dbxref=NCBI_GP:HJH9165449.1;Name=HJH9165449.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463113.1;locus_tag=O5D79_004051;product=aromatic amino acid transaminase;protein_id=HJH9165449.1;transl_table=11 DALFDJ020000025.1 tpg gene 20049 20762 . + . ID=gene-O5D79_004052;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=O5D79_004052 DALFDJ020000025.1 Protein Homology CDS 20049 20762 . + 0 ID=cds-HJH9165450.1;Parent=gene-O5D79_004052;Dbxref=NCBI_GP:HJH9165450.1;Name=HJH9165450.1;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463114.1;locus_tag=O5D79_004052;product=acid phosphatase AphA;protein_id=HJH9165450.1;transl_table=11 DALFDJ020000025.1 tpg gene 20891 21307 . + . ID=gene-O5D79_004053;Name=O5D79_004053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004053 DALFDJ020000025.1 Protein Homology CDS 20891 21307 . + 0 ID=cds-HJH9165451.1;Parent=gene-O5D79_004053;Dbxref=NCBI_GP:HJH9165451.1;Name=HJH9165451.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463115.1;locus_tag=O5D79_004053;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=HJH9165451.1;transl_table=11 DALFDJ020000025.1 tpg gene 21310 21666 . + . ID=gene-O5D79_004054;Name=O5D79_004054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004054 DALFDJ020000025.1 Protein Homology CDS 21310 21666 . + 0 ID=cds-HJH9165452.1;Parent=gene-O5D79_004054;Dbxref=NCBI_GP:HJH9165452.1;Name=HJH9165452.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463116.1;locus_tag=O5D79_004054;product=MmcQ/YjbR family DNA-binding protein;protein_id=HJH9165452.1;transl_table=11 DALFDJ020000025.1 tpg gene 21667 22005 . - . ID=gene-O5D79_004055;Name=O5D79_004055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004055 DALFDJ020000025.1 Protein Homology CDS 21667 22005 . - 0 ID=cds-HJH9165453.1;Parent=gene-O5D79_004055;Dbxref=NCBI_GP:HJH9165453.1;Name=HJH9165453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463117.1;locus_tag=O5D79_004055;product=hypothetical protein;protein_id=HJH9165453.1;transl_table=11 DALFDJ020000025.1 tpg gene 21992 22447 . - . ID=gene-O5D79_004056;Name=O5D79_004056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004056 DALFDJ020000025.1 Protein Homology CDS 21992 22447 . - 0 ID=cds-HJH9165454.1;Parent=gene-O5D79_004056;Dbxref=NCBI_GP:HJH9165454.1;Name=HJH9165454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463118.1;locus_tag=O5D79_004056;product=hypothetical protein;protein_id=HJH9165454.1;transl_table=11 DALFDJ020000025.1 tpg gene 22579 25404 . - . ID=gene-O5D79_004057;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=O5D79_004057 DALFDJ020000025.1 Protein Homology CDS 22579 25404 . - 0 ID=cds-HJH9165455.1;Parent=gene-O5D79_004057;Dbxref=NCBI_GP:HJH9165455.1;Name=HJH9165455.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463119.1;locus_tag=O5D79_004057;product=excinuclease ABC subunit UvrA;protein_id=HJH9165455.1;transl_table=11 DALFDJ020000025.1 tpg gene 25652 26182 . + . ID=gene-O5D79_004058;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=O5D79_004058 DALFDJ020000025.1 Protein Homology CDS 25652 26182 . + 0 ID=cds-HJH9165456.1;Parent=gene-O5D79_004058;Dbxref=NCBI_GP:HJH9165456.1;Name=HJH9165456.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463121.1;locus_tag=O5D79_004058;product=single-stranded DNA-binding protein SSB1;protein_id=HJH9165456.1;transl_table=11 DALFDJ020000025.1 tpg gene 27222 27854 . + . ID=gene-O5D79_004059;Name=siiA;gbkey=Gene;gene=siiA;gene_biotype=protein_coding;locus_tag=O5D79_004059 DALFDJ020000025.1 Protein Homology CDS 27222 27854 . + 0 ID=cds-HJH9165457.1;Parent=gene-O5D79_004059;Dbxref=NCBI_GP:HJH9165457.1;Name=HJH9165457.1;gbkey=CDS;gene=siiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463122.1;locus_tag=O5D79_004059;product=SPI-4 type I secretion system auxiliary protein SiiA;protein_id=HJH9165457.1;transl_table=11 DALFDJ020000025.1 tpg gene 27851 29239 . + . ID=gene-O5D79_004060;Name=O5D79_004060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004060 DALFDJ020000025.1 Protein Homology CDS 27851 29239 . + 0 ID=cds-HJH9165458.1;Parent=gene-O5D79_004060;Dbxref=NCBI_GP:HJH9165458.1;Name=HJH9165458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463123.1;locus_tag=O5D79_004060;product=MotA/TolQ/ExbB proton channel family protein;protein_id=HJH9165458.1;transl_table=11 DALFDJ020000025.1 tpg gene 29229 30548 . + . ID=gene-O5D79_004061;Name=siiC;gbkey=Gene;gene=siiC;gene_biotype=protein_coding;locus_tag=O5D79_004061 DALFDJ020000025.1 Protein Homology CDS 29229 30548 . + 0 ID=cds-HJH9165459.1;Parent=gene-O5D79_004061;Dbxref=NCBI_GP:HJH9165459.1;Name=HJH9165459.1;gbkey=CDS;gene=siiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463124.1;locus_tag=O5D79_004061;product=SPI-4 type I secretion system protein SiiC;protein_id=HJH9165459.1;transl_table=11 DALFDJ020000025.1 tpg gene 30545 31822 . + . ID=gene-O5D79_004062;Name=siiD;gbkey=Gene;gene=siiD;gene_biotype=protein_coding;locus_tag=O5D79_004062 DALFDJ020000025.1 Protein Homology CDS 30545 31822 . + 0 ID=cds-HJH9165460.1;Parent=gene-O5D79_004062;Dbxref=NCBI_GP:HJH9165460.1;Name=HJH9165460.1;gbkey=CDS;gene=siiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463125.1;locus_tag=O5D79_004062;product=SPI-4 type I secretion system protein SiiD;protein_id=HJH9165460.1;transl_table=11 DALFDJ020000025.1 tpg gene 31839 49445 . + . ID=gene-O5D79_004063;Name=O5D79_004063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004063 DALFDJ020000025.1 Protein Homology CDS 31839 49445 . + 0 ID=cds-HJH9165461.1;Parent=gene-O5D79_004063;Dbxref=NCBI_GP:HJH9165461.1;Name=HJH9165461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463126.1;locus_tag=O5D79_004063;product=Ig-like domain-containing protein;protein_id=HJH9165461.1;transl_table=11 DALFDJ020000025.1 tpg gene 49485 51551 . + . ID=gene-O5D79_004064;Name=siiF;gbkey=Gene;gene=siiF;gene_biotype=protein_coding;locus_tag=O5D79_004064 DALFDJ020000025.1 Protein Homology CDS 49485 51551 . + 0 ID=cds-HJH9165462.1;Parent=gene-O5D79_004064;Dbxref=NCBI_GP:HJH9165462.1;Name=HJH9165462.1;gbkey=CDS;gene=siiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463127.1;locus_tag=O5D79_004064;product=SPI-4 type I secretion system protein SiiF;protein_id=HJH9165462.1;transl_table=11 DALFDJ020000025.1 tpg gene 51829 52110 . - . ID=gene-O5D79_004065;Name=O5D79_004065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004065 DALFDJ020000025.1 Protein Homology CDS 51829 52110 . - 0 ID=cds-HJH9165463.1;Parent=gene-O5D79_004065;Dbxref=NCBI_GP:HJH9165463.1;Name=HJH9165463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463128.1;locus_tag=O5D79_004065;product=YjcB family protein;protein_id=HJH9165463.1;transl_table=11 DALFDJ020000025.1 tpg gene 52673 54274 . + . ID=gene-O5D79_004066;Name=O5D79_004066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004066 DALFDJ020000025.1 Protein Homology CDS 52673 54274 . + 0 ID=cds-HJH9165464.1;Parent=gene-O5D79_004066;Dbxref=NCBI_GP:HJH9165464.1;Name=HJH9165464.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463129.1;locus_tag=O5D79_004066;product=EAL domain-containing protein;protein_id=HJH9165464.1;transl_table=11 DALFDJ020000025.1 tpg gene 54262 54585 . - . ID=gene-O5D79_004067;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=O5D79_004067 DALFDJ020000025.1 Protein Homology CDS 54262 54585 . - 0 ID=cds-HJH9165465.1;Parent=gene-O5D79_004067;Dbxref=NCBI_GP:HJH9165465.1;Name=HJH9165465.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463130.1;locus_tag=O5D79_004067;product=superoxide response transcriptional regulator SoxS;protein_id=HJH9165465.1;transl_table=11 DALFDJ020000025.1 tpg gene 54672 55130 . + . ID=gene-O5D79_004068;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=O5D79_004068 DALFDJ020000025.1 Protein Homology CDS 54672 55130 . + 0 ID=cds-HJH9165466.1;Parent=gene-O5D79_004068;Dbxref=NCBI_GP:HJH9165466.1;Name=HJH9165466.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463131.1;locus_tag=O5D79_004068;product=redox-sensitive transcriptional activator SoxR;protein_id=HJH9165466.1;transl_table=11 DALFDJ020000025.1 tpg gene 55423 56091 . + . ID=gene-O5D79_004069;Name=O5D79_004069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004069 DALFDJ020000025.1 Protein Homology CDS 55423 56091 . + 0 ID=cds-HJH9165467.1;Parent=gene-O5D79_004069;Dbxref=NCBI_GP:HJH9165467.1;Name=HJH9165467.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463132.1;locus_tag=O5D79_004069;product=glutathione S-transferase family protein;protein_id=HJH9165467.1;transl_table=11 DALFDJ020000025.1 tpg gene 56438 57787 . + . ID=gene-O5D79_004070;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=O5D79_004070 DALFDJ020000025.1 Protein Homology CDS 56438 57787 . + 0 ID=cds-HJH9165468.1;Parent=gene-O5D79_004070;Dbxref=NCBI_GP:HJH9165468.1;Name=HJH9165468.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=O5D79_004070;product=guanine/hypoxanthine transporter GhxP;protein_id=HJH9165468.1;transl_table=11 DALFDJ020000025.1 tpg gene 57937 59583 . + . ID=gene-O5D79_004071;Name=O5D79_004071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004071 DALFDJ020000025.1 Protein Homology CDS 57937 59583 . + 0 ID=cds-HJH9165469.1;Parent=gene-O5D79_004071;Dbxref=NCBI_GP:HJH9165469.1;Name=HJH9165469.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=O5D79_004071;product=Na+/H+ antiporter;protein_id=HJH9165469.1;transl_table=11 DALFDJ020000025.1 tpg gene 59678 60565 . - . ID=gene-O5D79_004072;Name=O5D79_004072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004072 DALFDJ020000025.1 Protein Homology CDS 59678 60565 . - 0 ID=cds-HJH9165470.1;Parent=gene-O5D79_004072;Dbxref=NCBI_GP:HJH9165470.1;Name=HJH9165470.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463135.1;locus_tag=O5D79_004072;product=LysR family transcriptional regulator;protein_id=HJH9165470.1;transl_table=11 DALFDJ020000025.1 tpg gene 60669 61079 . + . ID=gene-O5D79_004073;Name=O5D79_004073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004073 DALFDJ020000025.1 Protein Homology CDS 60669 61079 . + 0 ID=cds-HJH9165471.1;Parent=gene-O5D79_004073;Dbxref=NCBI_GP:HJH9165471.1;Name=HJH9165471.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463136.1;locus_tag=O5D79_004073;product=CidA/LrgA family protein;protein_id=HJH9165471.1;transl_table=11 DALFDJ020000025.1 tpg gene 61072 61761 . + . ID=gene-O5D79_004074;Name=O5D79_004074;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004074 DALFDJ020000025.1 Protein Homology CDS 61072 61761 . + 0 ID=cds-HJH9165472.1;Parent=gene-O5D79_004074;Dbxref=NCBI_GP:HJH9165472.1;Name=HJH9165472.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=O5D79_004074;product=LrgB family protein;protein_id=HJH9165472.1;transl_table=11 DALFDJ020000025.1 tpg gene 61800 63449 . - . ID=gene-O5D79_004075;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=O5D79_004075 DALFDJ020000025.1 Protein Homology CDS 61800 63449 . - 0 ID=cds-HJH9165473.1;Parent=gene-O5D79_004075;Dbxref=NCBI_GP:HJH9165473.1;Name=HJH9165473.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=O5D79_004075;product=cation/acetate symporter ActP;protein_id=HJH9165473.1;transl_table=11 DALFDJ020000025.1 tpg gene 63446 63760 . - . ID=gene-O5D79_004076;Name=O5D79_004076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004076 DALFDJ020000025.1 Protein Homology CDS 63446 63760 . - 0 ID=cds-HJH9165474.1;Parent=gene-O5D79_004076;Dbxref=NCBI_GP:HJH9165474.1;Name=HJH9165474.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463139.1;locus_tag=O5D79_004076;product=DUF485 domain-containing protein;protein_id=HJH9165474.1;transl_table=11 DALFDJ020000025.1 tpg gene 63999 65957 . - . ID=gene-O5D79_004077;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=O5D79_004077 DALFDJ020000025.1 Protein Homology CDS 63999 65957 . - 0 ID=cds-HJH9165475.1;Parent=gene-O5D79_004077;Dbxref=NCBI_GP:HJH9165475.1;Name=HJH9165475.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463140.1;locus_tag=O5D79_004077;product=acetate--CoA ligase;protein_id=HJH9165475.1;transl_table=11 DALFDJ020000025.1 tpg gene 66389 67825 . + . ID=gene-O5D79_004078;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=O5D79_004078 DALFDJ020000025.1 Protein Homology CDS 66389 67825 . + 0 ID=cds-HJH9165476.1;Parent=gene-O5D79_004078;Dbxref=NCBI_GP:HJH9165476.1;Name=HJH9165476.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463142.1;locus_tag=O5D79_004078;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=HJH9165476.1;transl_table=11 DALFDJ020000025.1 tpg gene 67937 68503 . + . ID=gene-O5D79_004079;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=O5D79_004079 DALFDJ020000025.1 Protein Homology CDS 67937 68503 . + 0 ID=cds-HJH9165477.1;Parent=gene-O5D79_004079;Dbxref=NCBI_GP:HJH9165477.1;Name=HJH9165477.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=O5D79_004079;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=HJH9165477.1;transl_table=11 DALFDJ020000025.1 tpg gene 68500 69171 . + . ID=gene-O5D79_004080;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=O5D79_004080 DALFDJ020000025.1 Protein Homology CDS 68500 69171 . + 0 ID=cds-HJH9165478.1;Parent=gene-O5D79_004080;Dbxref=NCBI_GP:HJH9165478.1;Name=HJH9165478.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463144.1;locus_tag=O5D79_004080;product=cytochrome c nitrite reductase Fe-S protein;protein_id=HJH9165478.1;transl_table=11 DALFDJ020000025.1 tpg gene 69168 70124 . + . ID=gene-O5D79_004081;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=O5D79_004081 DALFDJ020000025.1 Protein Homology CDS 69168 70124 . + 0 ID=cds-HJH9165479.1;Parent=gene-O5D79_004081;Dbxref=NCBI_GP:HJH9165479.1;Name=HJH9165479.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463145.1;locus_tag=O5D79_004081;product=cytochrome c nitrite reductase subunit NrfD;protein_id=HJH9165479.1;transl_table=11 DALFDJ020000025.1 tpg gene 70117 72339 . + . ID=gene-O5D79_004082;Name=nrfEF;gbkey=Gene;gene=nrfEF;gene_biotype=protein_coding;locus_tag=O5D79_004082 DALFDJ020000025.1 Protein Homology CDS 70117 72339 . + 0 ID=cds-HJH9165480.1;Parent=gene-O5D79_004082;Dbxref=NCBI_GP:HJH9165480.1;Name=HJH9165480.1;gbkey=CDS;gene=nrfEF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=O5D79_004082;product=heme lyase NrfEFG subunit NrfEF;protein_id=HJH9165480.1;transl_table=11 DALFDJ020000025.1 tpg gene 72336 72956 . + . ID=gene-O5D79_004083;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=O5D79_004083 DALFDJ020000025.1 Protein Homology CDS 72336 72956 . + 0 ID=cds-HJH9165481.1;Parent=gene-O5D79_004083;Dbxref=NCBI_GP:HJH9165481.1;Name=HJH9165481.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463147.1;locus_tag=O5D79_004083;product=heme lyase NrfEFG subunit NrfG;protein_id=HJH9165481.1;transl_table=11 DALFDJ020000025.1 tpg gene 73301 74611 . + . ID=gene-O5D79_004084;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=O5D79_004084 DALFDJ020000025.1 Protein Homology CDS 73301 74611 . + 0 ID=cds-HJH9165482.1;Parent=gene-O5D79_004084;Dbxref=NCBI_GP:HJH9165482.1;Name=HJH9165482.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463148.1;locus_tag=O5D79_004084;product=glutamate/aspartate:proton symporter GltP;protein_id=HJH9165482.1;transl_table=11 DALFDJ020000025.1 tpg gene 74769 75458 . - . ID=gene-O5D79_004085;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=O5D79_004085 DALFDJ020000025.1 Protein Homology CDS 74769 75458 . - 0 ID=cds-HJH9165483.1;Parent=gene-O5D79_004085;Dbxref=NCBI_GP:HJH9165483.1;Name=HJH9165483.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463149.1;locus_tag=O5D79_004085;product=Sel1 family TPR-like repeat protein YjcO;protein_id=HJH9165483.1;transl_table=11 DALFDJ020000025.1 tpg gene 75635 77782 . - . ID=gene-O5D79_004086;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=O5D79_004086 DALFDJ020000025.1 Protein Homology CDS 75635 77782 . - 0 ID=cds-HJH9165484.1;Parent=gene-O5D79_004086;Dbxref=NCBI_GP:HJH9165484.1;Name=HJH9165484.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=O5D79_004086;product=formate dehydrogenase subunit alpha;protein_id=HJH9165484.1;transl_except=(pos:complement(77363..77365)%2Caa:Sec);transl_table=11 DALFDJ020000025.1 tpg gene 78137 79045 . - . ID=gene-O5D79_004087;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=O5D79_004087 DALFDJ020000025.1 Protein Homology CDS 78137 79045 . - 0 ID=cds-HJH9165485.1;Parent=gene-O5D79_004087;Dbxref=NCBI_GP:HJH9165485.1;Name=HJH9165485.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463151.1;locus_tag=O5D79_004087;product=lipid A hydroxylase LpxO;protein_id=HJH9165485.1;transl_table=11 DALFDJ020000025.1 tpg gene 79303 79737 . - . ID=gene-O5D79_004088;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=O5D79_004088 DALFDJ020000025.1 Protein Homology CDS 79303 79737 . - 0 ID=cds-HJH9165486.1;Parent=gene-O5D79_004088;Dbxref=NCBI_GP:HJH9165486.1;Name=HJH9165486.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=O5D79_004088;product=aminoalkylphosphonate N-acetyltransferase;protein_id=HJH9165486.1;transl_table=11 DALFDJ020000025.1 tpg gene 79889 80332 . - . ID=gene-O5D79_004089;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=O5D79_004089 DALFDJ020000025.1 Protein Homology CDS 79889 80332 . - 0 ID=cds-HJH9165487.1;Parent=gene-O5D79_004089;Dbxref=NCBI_GP:HJH9165487.1;Name=HJH9165487.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463153.1;locus_tag=O5D79_004089;product=VOC family metalloprotein YjdN;protein_id=HJH9165487.1;transl_table=11 DALFDJ020000025.1 tpg gene 80452 80787 . - . ID=gene-O5D79_004090;Name=O5D79_004090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004090 DALFDJ020000025.1 Protein Homology CDS 80452 80787 . - 0 ID=cds-HJH9165488.1;Parent=gene-O5D79_004090;Dbxref=NCBI_GP:HJH9165488.1;Name=HJH9165488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463154.1;locus_tag=O5D79_004090;product=zinc ribbon domain-containing protein YjdM;protein_id=HJH9165488.1;transl_table=11 DALFDJ020000025.1 tpg gene 81255 82757 . + . ID=gene-O5D79_004091;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=O5D79_004091 DALFDJ020000025.1 Protein Homology CDS 81255 82757 . + 0 ID=cds-HJH9165489.1;Parent=gene-O5D79_004091;Dbxref=NCBI_GP:HJH9165489.1;Name=HJH9165489.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=O5D79_004091;product=glycine betaine/L-proline transporter ProP;protein_id=HJH9165489.1;transl_table=11 DALFDJ020000025.1 tpg gene 82827 82916 . + . ID=gene-O5D79_004092;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=O5D79_004092 DALFDJ020000025.1 Protein Homology CDS 82827 82916 . + 0 ID=cds-HJH9165490.1;Parent=gene-O5D79_004092;Dbxref=NCBI_GP:HJH9165490.1;Name=HJH9165490.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000844399.1;locus_tag=O5D79_004092;product=LpxT activity modulator PmrR;protein_id=HJH9165490.1;transl_table=11 DALFDJ020000025.1 tpg gene 82924 83994 . - . ID=gene-O5D79_004093;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=O5D79_004093 DALFDJ020000025.1 Protein Homology CDS 82924 83994 . - 0 ID=cds-HJH9165491.1;Parent=gene-O5D79_004093;Dbxref=NCBI_GP:HJH9165491.1;Name=HJH9165491.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463156.1;locus_tag=O5D79_004093;product=two-component system sensor histidine kinase PmrB;protein_id=HJH9165491.1;transl_table=11 DALFDJ020000025.1 tpg gene 84004 84672 . - . ID=gene-O5D79_004094;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=O5D79_004094 DALFDJ020000025.1 Protein Homology CDS 84004 84672 . - 0 ID=cds-HJH9165492.1;Parent=gene-O5D79_004094;Dbxref=NCBI_GP:HJH9165492.1;Name=HJH9165492.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463157.1;locus_tag=O5D79_004094;product=two-component system response regulator PmrA;protein_id=HJH9165492.1;transl_table=11 DALFDJ020000025.1 tpg gene 84669 86312 . - . ID=gene-O5D79_004095;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=O5D79_004095 DALFDJ020000025.1 Protein Homology CDS 84669 86312 . - 0 ID=cds-HJH9165493.1;Parent=gene-O5D79_004095;Dbxref=NCBI_GP:HJH9165493.1;Name=HJH9165493.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463158.1;locus_tag=O5D79_004095;product=phosphoethanolamine transferase EptA;protein_id=HJH9165493.1;transl_table=11 DALFDJ020000025.1 tpg gene 86446 87783 . - . ID=gene-O5D79_004096;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=O5D79_004096 DALFDJ020000025.1 Protein Homology CDS 86446 87783 . - 0 ID=cds-HJH9165494.1;Parent=gene-O5D79_004096;Dbxref=NCBI_GP:HJH9165494.1;Name=HJH9165494.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463159.1;locus_tag=O5D79_004096;product=arginine/agmatine antiporter;protein_id=HJH9165494.1;transl_table=11 DALFDJ020000025.1 tpg gene 87923 88684 . - . ID=gene-O5D79_004097;Name=O5D79_004097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004097 DALFDJ020000025.1 Protein Homology CDS 87923 88684 . - 0 ID=cds-HJH9165495.1;Parent=gene-O5D79_004097;Dbxref=NCBI_GP:HJH9165495.1;Name=HJH9165495.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463160.1;locus_tag=O5D79_004097;product=AraC family transcriptional regulator;protein_id=HJH9165495.1;transl_table=11 ##sequence-region DALFDJ020000026.1 1 85257 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000026.1 tpg region 1 85257 . + . ID=DALFDJ020000026.1:1..85257;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000026.1 tpg gene 1 1156 . + . ID=gene-O5D79_004098;Name=O5D79_004098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004098;partial=true;start_range=.,1 DALFDJ020000026.1 Protein Homology CDS 1 1156 . + 1 ID=cds-HJH9165496.1;Parent=gene-O5D79_004098;Dbxref=NCBI_GP:HJH9165496.1;Name=HJH9165496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001729007.1;locus_tag=O5D79_004098;partial=true;product=hypothetical protein;protein_id=HJH9165496.1;start_range=.,1;transl_table=11 DALFDJ020000026.1 tpg gene 1160 1585 . + . ID=gene-O5D79_004099;Name=O5D79_004099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004099 DALFDJ020000026.1 Protein Homology CDS 1160 1585 . + 0 ID=cds-HJH9165497.1;Parent=gene-O5D79_004099;Dbxref=NCBI_GP:HJH9165497.1;Name=HJH9165497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012565125.1;locus_tag=O5D79_004099;product=phage tail protein;protein_id=HJH9165497.1;transl_table=11 DALFDJ020000026.1 tpg gene 1574 2149 . - . ID=gene-O5D79_004100;Name=O5D79_004100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004100 DALFDJ020000026.1 GeneMarkS-2+ CDS 1574 2149 . - 0 ID=cds-HJH9165498.1;Parent=gene-O5D79_004100;Dbxref=NCBI_GP:HJH9165498.1;Name=HJH9165498.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004100;product=hypothetical protein;protein_id=HJH9165498.1;transl_table=11 DALFDJ020000026.1 tpg gene 2175 2390 . + . ID=gene-O5D79_004101;Name=O5D79_004101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004101 DALFDJ020000026.1 Protein Homology CDS 2175 2390 . + 0 ID=cds-HJH9165499.1;Parent=gene-O5D79_004101;Dbxref=NCBI_GP:HJH9165499.1;Name=HJH9165499.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017316.6;locus_tag=O5D79_004101;product=tail protein X;protein_id=HJH9165499.1;transl_table=11 DALFDJ020000026.1 tpg gene 2549 3427 . + . ID=gene-O5D79_004102;Name=O5D79_004102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004102 DALFDJ020000026.1 Protein Homology CDS 2549 3427 . + 0 ID=cds-HJH9165500.1;Parent=gene-O5D79_004102;Dbxref=NCBI_GP:HJH9165500.1;Name=HJH9165500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287093.1;locus_tag=O5D79_004102;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=HJH9165500.1;transl_table=11 DALFDJ020000026.1 tpg gene 3979 4788 . - . ID=gene-O5D79_004103;Name=O5D79_004103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004103 DALFDJ020000026.1 Protein Homology CDS 3979 4788 . - 0 ID=cds-HJH9165501.1;Parent=gene-O5D79_004103;Dbxref=NCBI_GP:HJH9165501.1;Name=HJH9165501.1;Ontology_term=GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236845.1;locus_tag=O5D79_004103;product=KilA-N domain-containing protein;protein_id=HJH9165501.1;transl_table=11 DALFDJ020000026.1 tpg gene 5107 6126 . + . ID=gene-O5D79_004104;Name=O5D79_004104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004104 DALFDJ020000026.1 Protein Homology CDS 5107 6126 . + 0 ID=cds-HJH9165502.1;Parent=gene-O5D79_004104;Dbxref=NCBI_GP:HJH9165502.1;Name=HJH9165502.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019996.6;locus_tag=O5D79_004104;product=prophage tail fiber N-terminal domain-containing protein;protein_id=HJH9165502.1;transl_table=11 DALFDJ020000026.1 tpg gene 6460 6735 . + . ID=gene-O5D79_004105;Name=O5D79_004105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004105 DALFDJ020000026.1 Protein Homology CDS 6460 6735 . + 0 ID=cds-HJH9165503.1;Parent=gene-O5D79_004105;Dbxref=NCBI_GP:HJH9165503.1;Name=HJH9165503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=O5D79_004105;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=HJH9165503.1;transl_table=11 DALFDJ020000026.1 tpg gene 6767 7885 . + . ID=gene-O5D79_004106;Name=O5D79_004106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004106 DALFDJ020000026.1 Protein Homology CDS 6767 7885 . + 0 ID=cds-HJH9165504.1;Parent=gene-O5D79_004106;Dbxref=NCBI_GP:HJH9165504.1;Name=HJH9165504.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=O5D79_004106;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=HJH9165504.1;transl_table=11 DALFDJ020000026.1 tpg gene 8054 9679 . + . ID=gene-O5D79_004107;Name=O5D79_004107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004107 DALFDJ020000026.1 Protein Homology CDS 8054 9679 . + 0 ID=cds-HJH9165505.1;Parent=gene-O5D79_004107;Dbxref=NCBI_GP:HJH9165505.1;Name=HJH9165505.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460585.2;locus_tag=O5D79_004107;product=methyl-accepting chemotaxis protein;protein_id=HJH9165505.1;transl_table=11 DALFDJ020000026.1 tpg gene 9740 10663 . - . ID=gene-O5D79_004108;Name=O5D79_004108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004108 DALFDJ020000026.1 Protein Homology CDS 9740 10663 . - 0 ID=cds-HJH9165506.1;Parent=gene-O5D79_004108;Dbxref=NCBI_GP:HJH9165506.1;Name=HJH9165506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=O5D79_004108;product=LysR substrate-binding domain-containing protein;protein_id=HJH9165506.1;transl_table=11 DALFDJ020000026.1 tpg gene 10956 12299 . + . ID=gene-O5D79_004109;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=O5D79_004109 DALFDJ020000026.1 Protein Homology CDS 10956 12299 . + 0 ID=cds-HJH9165507.1;Parent=gene-O5D79_004109;Dbxref=NCBI_GP:HJH9165507.1;Name=HJH9165507.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460583.1;locus_tag=O5D79_004109;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=HJH9165507.1;transl_table=11 DALFDJ020000026.1 tpg gene 12348 13856 . + . ID=gene-O5D79_004110;Name=O5D79_004110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004110 DALFDJ020000026.1 Protein Homology CDS 12348 13856 . + 0 ID=cds-HJH9165508.1;Parent=gene-O5D79_004110;Dbxref=NCBI_GP:HJH9165508.1;Name=HJH9165508.1;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460582.1;locus_tag=O5D79_004110;product=carboxylesterase/lipase family protein;protein_id=HJH9165508.1;transl_table=11 DALFDJ020000026.1 tpg gene 14076 15731 . + . ID=gene-O5D79_004111;Name=O5D79_004111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004111 DALFDJ020000026.1 Protein Homology CDS 14076 15731 . + 0 ID=cds-HJH9165509.1;Parent=gene-O5D79_004111;Dbxref=NCBI_GP:HJH9165509.1;Name=HJH9165509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460581.1;locus_tag=O5D79_004111;product=glucan biosynthesis protein D;protein_id=HJH9165509.1;transl_table=11 DALFDJ020000026.1 tpg gene 15927 16502 . + . ID=gene-O5D79_004112;Name=O5D79_004112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004112 DALFDJ020000026.1 Protein Homology CDS 15927 16502 . + 0 ID=cds-HJH9165510.1;Parent=gene-O5D79_004112;Dbxref=NCBI_GP:HJH9165510.1;Name=HJH9165510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460580.1;locus_tag=O5D79_004112;product=YceI family protein;protein_id=HJH9165510.1;transl_table=11 DALFDJ020000026.1 tpg gene 16680 17399 . - . ID=gene-O5D79_004113;Name=O5D79_004113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004113 DALFDJ020000026.1 Protein Homology CDS 16680 17399 . - 0 ID=cds-HJH9165511.1;Parent=gene-O5D79_004113;Dbxref=NCBI_GP:HJH9165511.1;Name=HJH9165511.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000023780.1;locus_tag=O5D79_004113;product=FadR/GntR family transcriptional regulator;protein_id=HJH9165511.1;transl_table=11 DALFDJ020000026.1 tpg gene 17490 18581 . - . ID=gene-O5D79_004114;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=O5D79_004114 DALFDJ020000026.1 Protein Homology CDS 17490 18581 . - 0 ID=cds-HJH9165512.1;Parent=gene-O5D79_004114;Dbxref=NCBI_GP:HJH9165512.1;Name=HJH9165512.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131634.1;locus_tag=O5D79_004114;product=L-idonate 5-dehydrogenase;protein_id=HJH9165512.1;transl_table=11 DALFDJ020000026.1 tpg gene 18550 19911 . - . ID=gene-O5D79_004115;Name=O5D79_004115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004115 DALFDJ020000026.1 Protein Homology CDS 18550 19911 . - 0 ID=cds-HJH9165513.1;Parent=gene-O5D79_004115;Dbxref=NCBI_GP:HJH9165513.1;Name=HJH9165513.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000648132.1;locus_tag=O5D79_004115;product=MFS transporter;protein_id=HJH9165513.1;transl_table=11 DALFDJ020000026.1 tpg gene 19995 20762 . - . ID=gene-O5D79_004116;Name=O5D79_004116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004116 DALFDJ020000026.1 Protein Homology CDS 19995 20762 . - 0 ID=cds-HJH9165514.1;Parent=gene-O5D79_004116;Dbxref=NCBI_GP:HJH9165514.1;Name=HJH9165514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894239.1;locus_tag=O5D79_004116;product=SDR family oxidoreductase;protein_id=HJH9165514.1;transl_table=11 DALFDJ020000026.1 tpg gene 21100 22353 . + . ID=gene-O5D79_004117;Name=O5D79_004117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004117 DALFDJ020000026.1 Protein Homology CDS 21100 22353 . + 0 ID=cds-HJH9165515.1;Parent=gene-O5D79_004117;Dbxref=NCBI_GP:HJH9165515.1;Name=HJH9165515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000067287.1;locus_tag=O5D79_004117;product=enolase C-terminal domain-like protein;protein_id=HJH9165515.1;transl_table=11 DALFDJ020000026.1 tpg gene 22494 22931 . - . ID=gene-O5D79_004118;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=O5D79_004118 DALFDJ020000026.1 Protein Homology CDS 22494 22931 . - 0 ID=cds-HJH9165516.1;Parent=gene-O5D79_004118;Dbxref=NCBI_GP:HJH9165516.1;Name=HJH9165516.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=O5D79_004118;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=HJH9165516.1;transl_table=11 DALFDJ020000026.1 tpg gene 22931 23722 . - . ID=gene-O5D79_004119;Name=O5D79_004119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004119 DALFDJ020000026.1 Protein Homology CDS 22931 23722 . - 0 ID=cds-HJH9165517.1;Parent=gene-O5D79_004119;Dbxref=NCBI_GP:HJH9165517.1;Name=HJH9165517.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460577.1;locus_tag=O5D79_004119;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=HJH9165517.1;transl_table=11 DALFDJ020000026.1 tpg gene 23738 24370 . - . ID=gene-O5D79_004120;Name=O5D79_004120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004120 DALFDJ020000026.1 Protein Homology CDS 23738 24370 . - 0 ID=cds-HJH9165518.1;Parent=gene-O5D79_004120;Dbxref=NCBI_GP:HJH9165518.1;Name=HJH9165518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460576.1;locus_tag=O5D79_004120;product=ribulose-phosphate 3 epimerase family protein;protein_id=HJH9165518.1;transl_table=11 DALFDJ020000026.1 tpg gene 24382 24819 . - . ID=gene-O5D79_004121;Name=sgcA;gbkey=Gene;gene=sgcA;gene_biotype=protein_coding;locus_tag=O5D79_004121 DALFDJ020000026.1 Protein Homology CDS 24382 24819 . - 0 ID=cds-HJH9165519.1;Parent=gene-O5D79_004121;Dbxref=NCBI_GP:HJH9165519.1;Name=HJH9165519.1;gbkey=CDS;gene=sgcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460575.1;locus_tag=O5D79_004121;product=SgcA family PTS sugar transporter subunit IIA;protein_id=HJH9165519.1;transl_table=11 DALFDJ020000026.1 tpg gene 24951 25757 . - . ID=gene-O5D79_004122;Name=sgcQ;gbkey=Gene;gene=sgcQ;gene_biotype=protein_coding;locus_tag=O5D79_004122 DALFDJ020000026.1 Protein Homology CDS 24951 25757 . - 0 ID=cds-HJH9165520.1;Parent=gene-O5D79_004122;Dbxref=NCBI_GP:HJH9165520.1;Name=HJH9165520.1;gbkey=CDS;gene=sgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460574.1;locus_tag=O5D79_004122;product=BtpA family protein SgcQ;protein_id=HJH9165520.1;transl_table=11 DALFDJ020000026.1 tpg gene 25771 27084 . - . ID=gene-O5D79_004123;Name=sgcC;gbkey=Gene;gene=sgcC;gene_biotype=protein_coding;locus_tag=O5D79_004123 DALFDJ020000026.1 Protein Homology CDS 25771 27084 . - 0 ID=cds-HJH9165521.1;Parent=gene-O5D79_004123;Dbxref=NCBI_GP:HJH9165521.1;Name=HJH9165521.1;gbkey=CDS;gene=sgcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460573.1;locus_tag=O5D79_004123;product=PTS sugar transporter subunit IIC SgcC;protein_id=HJH9165521.1;transl_table=11 DALFDJ020000026.1 tpg gene 27095 27376 . - . ID=gene-O5D79_004124;Name=sgcB;gbkey=Gene;gene=sgcB;gene_biotype=protein_coding;locus_tag=O5D79_004124 DALFDJ020000026.1 Protein Homology CDS 27095 27376 . - 0 ID=cds-HJH9165522.1;Parent=gene-O5D79_004124;Dbxref=NCBI_GP:HJH9165522.1;Name=HJH9165522.1;gbkey=CDS;gene=sgcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460572.1;locus_tag=O5D79_004124;product=PTS sugar transporter subunit IIB SgcB;protein_id=HJH9165522.1;transl_table=11 DALFDJ020000026.1 tpg gene 27373 28491 . - . ID=gene-O5D79_004125;Name=O5D79_004125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004125 DALFDJ020000026.1 Protein Homology CDS 27373 28491 . - 0 ID=cds-HJH9165523.1;Parent=gene-O5D79_004125;Dbxref=NCBI_GP:HJH9165523.1;Name=HJH9165523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460571.1;locus_tag=O5D79_004125;product=M42 family metallopeptidase;protein_id=HJH9165523.1;transl_table=11 DALFDJ020000026.1 tpg gene 28708 29247 . + . ID=gene-O5D79_004126;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=O5D79_004126 DALFDJ020000026.1 Protein Homology CDS 28708 29247 . + 0 ID=cds-HJH9165524.1;Parent=gene-O5D79_004126;Dbxref=NCBI_GP:HJH9165524.1;Name=HJH9165524.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460570.1;locus_tag=O5D79_004126;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=HJH9165524.1;transl_table=11 DALFDJ020000026.1 tpg gene 29244 30224 . - . ID=gene-O5D79_004127;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=O5D79_004127 DALFDJ020000026.1 Protein Homology CDS 29244 30224 . - 0 ID=cds-HJH9165525.1;Parent=gene-O5D79_004127;Dbxref=NCBI_GP:HJH9165525.1;Name=HJH9165525.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460569.1;locus_tag=O5D79_004127;product=YdcK family protein;protein_id=HJH9165525.1;transl_table=11 DALFDJ020000026.1 tpg gene 30331 31344 . + . ID=gene-O5D79_004128;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=O5D79_004128 DALFDJ020000026.1 Protein Homology CDS 30331 31344 . + 0 ID=cds-HJH9165526.1;Parent=gene-O5D79_004128;Dbxref=NCBI_GP:HJH9165526.1;Name=HJH9165526.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460568.1;locus_tag=O5D79_004128;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=HJH9165526.1;transl_table=11 DALFDJ020000026.1 tpg gene 31331 31927 . + . ID=gene-O5D79_004129;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=O5D79_004129 DALFDJ020000026.1 Protein Homology CDS 31331 31927 . + 0 ID=cds-HJH9165527.1;Parent=gene-O5D79_004129;Dbxref=NCBI_GP:HJH9165527.1;Name=HJH9165527.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=O5D79_004129;product=tellurite resistance methyltransferase TehB;protein_id=HJH9165527.1;transl_table=11 DALFDJ020000026.1 tpg gene 32083 32751 . + . ID=gene-O5D79_004130;Name=O5D79_004130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004130 DALFDJ020000026.1 Protein Homology CDS 32083 32751 . + 0 ID=cds-HJH9165528.1;Parent=gene-O5D79_004130;Dbxref=NCBI_GP:HJH9165528.1;Name=HJH9165528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460566.1;locus_tag=O5D79_004130;product=DUF3313 domain-containing protein;protein_id=HJH9165528.1;transl_table=11 DALFDJ020000026.1 tpg gene 32805 33983 . - . ID=gene-O5D79_004131;Name=O5D79_004131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004131 DALFDJ020000026.1 Protein Homology CDS 32805 33983 . - 0 ID=cds-HJH9165529.1;Parent=gene-O5D79_004131;Dbxref=NCBI_GP:HJH9165529.1;Name=HJH9165529.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460565.1;locus_tag=O5D79_004131;product=benzoate/H(+) symporter BenE family transporter;protein_id=HJH9165529.1;transl_table=11 DALFDJ020000026.1 tpg gene 34078 34614 . + . ID=gene-O5D79_004132;Name=O5D79_004132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004132 DALFDJ020000026.1 Protein Homology CDS 34078 34614 . + 0 ID=cds-HJH9165530.1;Parent=gene-O5D79_004132;Dbxref=NCBI_GP:HJH9165530.1;Name=HJH9165530.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460564.1;locus_tag=O5D79_004132;product=helix-turn-helix domain-containing protein;protein_id=HJH9165530.1;transl_table=11 DALFDJ020000026.1 tpg gene 34693 36657 . + . ID=gene-O5D79_004133;Name=O5D79_004133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004133 DALFDJ020000026.1 Protein Homology CDS 34693 36657 . + 0 ID=cds-HJH9165531.1;Parent=gene-O5D79_004133;Dbxref=NCBI_GP:HJH9165531.1;Name=HJH9165531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460563.1;locus_tag=O5D79_004133;product=peptidase U32 family protein;protein_id=HJH9165531.1;transl_table=11 DALFDJ020000026.1 tpg gene 36658 36888 . - . ID=gene-O5D79_004134;Name=O5D79_004134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004134 DALFDJ020000026.1 Protein Homology CDS 36658 36888 . - 0 ID=cds-HJH9165532.1;Parent=gene-O5D79_004134;Dbxref=NCBI_GP:HJH9165532.1;Name=HJH9165532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460562.1;locus_tag=O5D79_004134;product=DUF2554 family protein;protein_id=HJH9165532.1;transl_table=11 DALFDJ020000026.1 tpg gene 37160 38110 . - . ID=gene-O5D79_004135;Name=sifB;gbkey=Gene;gene=sifB;gene_biotype=protein_coding;locus_tag=O5D79_004135 DALFDJ020000026.1 Protein Homology CDS 37160 38110 . - 0 ID=cds-HJH9165533.1;Parent=gene-O5D79_004135;Dbxref=NCBI_GP:HJH9165533.1;Name=HJH9165533.1;gbkey=CDS;gene=sifB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460561.1;locus_tag=O5D79_004135;product=SPI-2 type III secretion system effector SifB;protein_id=HJH9165533.1;transl_table=11 DALFDJ020000026.1 tpg gene 38639 39037 . + . ID=gene-O5D79_004136;Name=O5D79_004136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004136 DALFDJ020000026.1 Protein Homology CDS 38639 39037 . + 0 ID=cds-HJH9165534.1;Parent=gene-O5D79_004136;Dbxref=NCBI_GP:HJH9165534.1;Name=HJH9165534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460560.1;locus_tag=O5D79_004136;product=D-alanyl-D-alanine dipeptidase;protein_id=HJH9165534.1;transl_table=11 DALFDJ020000026.1 tpg pseudogene 39070 39301 . + . ID=gene-O5D79_004137;Name=O5D79_004137;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004137;pseudo=true DALFDJ020000026.1 Protein Homology CDS 39070 39301 . + 0 ID=cds-O5D79_004137;Parent=gene-O5D79_004137;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448018.1;locus_tag=O5D79_004137;product=hypothetical protein;pseudo=true;transl_table=11 DALFDJ020000026.1 tpg gene 39560 40330 . + . ID=gene-O5D79_004138;Name=O5D79_004138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004138 DALFDJ020000026.1 Protein Homology CDS 39560 40330 . + 0 ID=cds-HJH9165535.1;Parent=gene-O5D79_004138;Dbxref=NCBI_GP:HJH9165535.1;Name=HJH9165535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460558.1;locus_tag=O5D79_004138;product=M15 family metallopeptidase;protein_id=HJH9165535.1;transl_table=11 DALFDJ020000026.1 tpg gene 40466 41890 . + . ID=gene-O5D79_004139;Name=ycdR;gbkey=Gene;gene=ycdR;gene_biotype=protein_coding;locus_tag=O5D79_004139 DALFDJ020000026.1 Protein Homology CDS 40466 41890 . + 0 ID=cds-HJH9165536.1;Parent=gene-O5D79_004139;Dbxref=NCBI_GP:HJH9165536.1;Name=HJH9165536.1;gbkey=CDS;gene=ycdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460557.1;locus_tag=O5D79_004139;product=GntR family transcriptional regulator YdcR;protein_id=HJH9165536.1;transl_table=11 DALFDJ020000026.1 tpg gene 42005 43450 . + . ID=gene-O5D79_004140;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=O5D79_004140 DALFDJ020000026.1 Protein Homology CDS 42005 43450 . + 0 ID=cds-HJH9165537.1;Parent=gene-O5D79_004140;Dbxref=NCBI_GP:HJH9165537.1;Name=HJH9165537.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460556.3;locus_tag=O5D79_004140;product=aminobutyraldehyde dehydrogenase;protein_id=HJH9165537.1;transl_table=11 DALFDJ020000026.1 tpg gene 43555 43650 . - . ID=gene-O5D79_004141;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=O5D79_004141 DALFDJ020000026.1 Protein Homology CDS 43555 43650 . - 0 ID=cds-HJH9165538.1;Parent=gene-O5D79_004141;Dbxref=NCBI_GP:HJH9165538.1;Name=HJH9165538.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103198.1;locus_tag=O5D79_004141;product=stress response membrane protein YncL;protein_id=HJH9165538.1;transl_table=11 DALFDJ020000026.1 tpg gene 43849 44022 . + . ID=gene-O5D79_004142;Name=O5D79_004142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004142 DALFDJ020000026.1 Protein Homology CDS 43849 44022 . + 0 ID=cds-HJH9165539.1;Parent=gene-O5D79_004142;Dbxref=NCBI_GP:HJH9165539.1;Name=HJH9165539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=O5D79_004142;product=GhoT/OrtT family toxin;protein_id=HJH9165539.1;transl_table=11 DALFDJ020000026.1 tpg gene 44067 46211 . - . ID=gene-O5D79_004143;Name=srfC;gbkey=Gene;gene=srfC;gene_biotype=protein_coding;locus_tag=O5D79_004143 DALFDJ020000026.1 Protein Homology CDS 44067 46211 . - 0 ID=cds-HJH9165540.1;Parent=gene-O5D79_004143;Dbxref=NCBI_GP:HJH9165540.1;Name=HJH9165540.1;gbkey=CDS;gene=srfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460554.1;locus_tag=O5D79_004143;product=virulence-associated effector SrfC;protein_id=HJH9165540.1;transl_table=11 DALFDJ020000026.1 tpg gene 46208 49189 . - . ID=gene-O5D79_004144;Name=O5D79_004144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004144 DALFDJ020000026.1 Protein Homology CDS 46208 49189 . - 0 ID=cds-HJH9165541.1;Parent=gene-O5D79_004144;Dbxref=NCBI_GP:HJH9165541.1;Name=HJH9165541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=O5D79_004144;product=virulence factor SrfB;protein_id=HJH9165541.1;transl_table=11 DALFDJ020000026.1 tpg gene 49194 50519 . - . ID=gene-O5D79_004145;Name=srfA;gbkey=Gene;gene=srfA;gene_biotype=protein_coding;locus_tag=O5D79_004145 DALFDJ020000026.1 Protein Homology CDS 49194 50519 . - 0 ID=cds-HJH9165542.1;Parent=gene-O5D79_004145;Dbxref=NCBI_GP:HJH9165542.1;Name=HJH9165542.1;gbkey=CDS;gene=srfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460552.1;locus_tag=O5D79_004145;product=virulence-associated effector SrfA;protein_id=HJH9165542.1;transl_table=11 DALFDJ020000026.1 tpg gene 50743 50976 . + . ID=gene-O5D79_004146;Name=O5D79_004146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004146 DALFDJ020000026.1 Protein Homology CDS 50743 50976 . + 0 ID=cds-HJH9165543.1;Parent=gene-O5D79_004146;Dbxref=NCBI_GP:HJH9165543.1;Name=HJH9165543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460551.1;locus_tag=O5D79_004146;product=YdcY family protein;protein_id=HJH9165543.1;transl_table=11 DALFDJ020000026.1 tpg gene 50981 51430 . - . ID=gene-O5D79_004147;Name=O5D79_004147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004147 DALFDJ020000026.1 Protein Homology CDS 50981 51430 . - 0 ID=cds-HJH9165544.1;Parent=gene-O5D79_004147;Dbxref=NCBI_GP:HJH9165544.1;Name=HJH9165544.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460550.1;locus_tag=O5D79_004147;product=DMT family transporter;protein_id=HJH9165544.1;transl_table=11 DALFDJ020000026.1 tpg gene 51430 51945 . - . ID=gene-O5D79_004148;Name=mddA;gbkey=Gene;gene=mddA;gene_biotype=protein_coding;locus_tag=O5D79_004148 DALFDJ020000026.1 Protein Homology CDS 51430 51945 . - 0 ID=cds-HJH9165545.1;Parent=gene-O5D79_004148;Dbxref=NCBI_GP:HJH9165545.1;Name=HJH9165545.1;Note=Keep exception level- 87%25 similar to E. coli K12 P76112%2C different gene symbol;gbkey=CDS;gene=mddA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460549.1;locus_tag=O5D79_004148;product=L-methionine sulfoximine/L-methionine sulfone acetyltransferase;protein_id=HJH9165545.1;transl_table=11 DALFDJ020000026.1 tpg gene 52157 53194 . + . ID=gene-O5D79_004149;Name=O5D79_004149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004149 DALFDJ020000026.1 Protein Homology CDS 52157 53194 . + 0 ID=cds-HJH9165546.1;Parent=gene-O5D79_004149;Dbxref=NCBI_GP:HJH9165546.1;Name=HJH9165546.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517827.1;locus_tag=O5D79_004149;product=NADP-dependent oxidoreductase;protein_id=HJH9165546.1;transl_table=11 DALFDJ020000026.1 tpg gene 53528 54193 . + . ID=gene-O5D79_004150;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=O5D79_004150 DALFDJ020000026.1 Protein Homology CDS 53528 54193 . + 0 ID=cds-HJH9165547.1;Parent=gene-O5D79_004150;Dbxref=NCBI_GP:HJH9165547.1;Name=HJH9165547.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460547.1;locus_tag=O5D79_004150;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=HJH9165547.1;transl_table=11 DALFDJ020000026.1 tpg gene 54249 56369 . - . ID=gene-O5D79_004151;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=O5D79_004151 DALFDJ020000026.1 Protein Homology CDS 54249 56369 . - 0 ID=cds-HJH9165548.1;Parent=gene-O5D79_004151;Dbxref=NCBI_GP:HJH9165548.1;Name=HJH9165548.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460546.1;locus_tag=O5D79_004151;product=TonB-dependent receptor PqqU;protein_id=HJH9165548.1;transl_table=11 DALFDJ020000026.1 tpg gene 56633 57694 . + . ID=gene-O5D79_004152;Name=O5D79_004152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004152 DALFDJ020000026.1 Protein Homology CDS 56633 57694 . + 0 ID=cds-HJH9165549.1;Parent=gene-O5D79_004152;Dbxref=NCBI_GP:HJH9165549.1;Name=HJH9165549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460545.1;locus_tag=O5D79_004152;product=YncE family protein;protein_id=HJH9165549.1;transl_table=11 DALFDJ020000026.1 tpg gene 57839 58060 . + . ID=gene-O5D79_004153;Name=O5D79_004153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004153 DALFDJ020000026.1 Protein Homology CDS 57839 58060 . + 0 ID=cds-HJH9165550.1;Parent=gene-O5D79_004153;Dbxref=NCBI_GP:HJH9165550.1;Name=HJH9165550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460544.1;locus_tag=O5D79_004153;product=YgdI/YgdR family lipoprotein;protein_id=HJH9165550.1;transl_table=11 DALFDJ020000026.1 tpg gene 58137 59630 . - . ID=gene-O5D79_004154;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=O5D79_004154 DALFDJ020000026.1 Protein Homology CDS 58137 59630 . - 0 ID=cds-HJH9165551.1;Parent=gene-O5D79_004154;Dbxref=NCBI_GP:HJH9165551.1;Name=HJH9165551.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460543.1;locus_tag=O5D79_004154;product=L-asparagine permease;protein_id=HJH9165551.1;transl_table=11 DALFDJ020000026.1 tpg gene 60142 60774 . + . ID=gene-O5D79_004155;Name=steA;gbkey=Gene;gene=steA;gene_biotype=protein_coding;locus_tag=O5D79_004155 DALFDJ020000026.1 Protein Homology CDS 60142 60774 . + 0 ID=cds-HJH9165552.1;Parent=gene-O5D79_004155;Dbxref=NCBI_GP:HJH9165552.1;Name=HJH9165552.1;gbkey=CDS;gene=steA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460542.1;locus_tag=O5D79_004155;product=type III secretion system effector SteA;protein_id=HJH9165552.1;transl_table=11 DALFDJ020000026.1 tpg gene 61058 61903 . + . ID=gene-O5D79_004156;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=O5D79_004156 DALFDJ020000026.1 Protein Homology CDS 61058 61903 . + 0 ID=cds-HJH9165553.1;Parent=gene-O5D79_004156;Dbxref=NCBI_GP:HJH9165553.1;Name=HJH9165553.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460541.1;locus_tag=O5D79_004156;product=N-hydroxyarylamine O-acetyltransferase;protein_id=HJH9165553.1;transl_table=11 DALFDJ020000026.1 tpg gene 61939 62832 . - . ID=gene-O5D79_004157;Name=O5D79_004157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004157 DALFDJ020000026.1 Protein Homology CDS 61939 62832 . - 0 ID=cds-HJH9165554.1;Parent=gene-O5D79_004157;Dbxref=NCBI_GP:HJH9165554.1;Name=HJH9165554.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460540.1;locus_tag=O5D79_004157;product=PhzF family isomerase;protein_id=HJH9165554.1;transl_table=11 DALFDJ020000026.1 tpg gene 62937 63617 . - . ID=gene-O5D79_004158;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=O5D79_004158 DALFDJ020000026.1 Protein Homology CDS 62937 63617 . - 0 ID=cds-HJH9165555.1;Parent=gene-O5D79_004158;Dbxref=NCBI_GP:HJH9165555.1;Name=HJH9165555.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=O5D79_004158;product=respiratory nitrate reductase subunit gamma;protein_id=HJH9165555.1;transl_table=11 DALFDJ020000026.1 tpg gene 63614 64309 . - . ID=gene-O5D79_004159;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=O5D79_004159 DALFDJ020000026.1 Protein Homology CDS 63614 64309 . - 0 ID=cds-HJH9165556.1;Parent=gene-O5D79_004159;Dbxref=NCBI_GP:HJH9165556.1;Name=HJH9165556.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460538.1;locus_tag=O5D79_004159;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=HJH9165556.1;transl_table=11 DALFDJ020000026.1 tpg gene 64309 65853 . - . ID=gene-O5D79_004160;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=O5D79_004160 DALFDJ020000026.1 Protein Homology CDS 64309 65853 . - 0 ID=cds-HJH9165557.1;Parent=gene-O5D79_004160;Dbxref=NCBI_GP:HJH9165557.1;Name=HJH9165557.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=O5D79_004160;product=nitrate reductase subunit beta;protein_id=HJH9165557.1;transl_table=11 DALFDJ020000026.1 tpg gene 65850 69590 . - . ID=gene-O5D79_004161;Name=O5D79_004161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004161 DALFDJ020000026.1 Protein Homology CDS 65850 69590 . - 0 ID=cds-HJH9165558.1;Parent=gene-O5D79_004161;Dbxref=NCBI_GP:HJH9165558.1;Name=HJH9165558.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=O5D79_004161;product=nitrate reductase subunit alpha;protein_id=HJH9165558.1;transl_table=11 DALFDJ020000026.1 tpg gene 69682 71070 . - . ID=gene-O5D79_004162;Name=O5D79_004162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004162 DALFDJ020000026.1 Protein Homology CDS 69682 71070 . - 0 ID=cds-HJH9165559.1;Parent=gene-O5D79_004162;Dbxref=NCBI_GP:HJH9165559.1;Name=HJH9165559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460535.1;locus_tag=O5D79_004162;product=NarK family nitrate/nitrite MFS transporter;protein_id=HJH9165559.1;transl_table=11 DALFDJ020000026.1 tpg gene 71284 71862 . - . ID=gene-O5D79_004163;Name=O5D79_004163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004163 DALFDJ020000026.1 Protein Homology CDS 71284 71862 . - 0 ID=cds-HJH9165560.1;Parent=gene-O5D79_004163;Dbxref=NCBI_GP:HJH9165560.1;Name=HJH9165560.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460534.1;locus_tag=O5D79_004163;product=TetR family transcriptional regulator;protein_id=HJH9165560.1;transl_table=11 DALFDJ020000026.1 tpg gene 71980 73467 . + . ID=gene-O5D79_004164;Name=smvA;gbkey=Gene;gene=smvA;gene_biotype=protein_coding;locus_tag=O5D79_004164 DALFDJ020000026.1 Protein Homology CDS 71980 73467 . + 0 ID=cds-HJH9165561.1;Parent=gene-O5D79_004164;Dbxref=NCBI_GP:HJH9165561.1;Name=HJH9165561.1;gbkey=CDS;gene=smvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460533.1;locus_tag=O5D79_004164;product=methyl viologen efflux MFS transporter SmvA;protein_id=HJH9165561.1;transl_table=11 DALFDJ020000026.1 tpg gene 73492 73872 . - . ID=gene-O5D79_004165;Name=O5D79_004165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004165 DALFDJ020000026.1 Protein Homology CDS 73492 73872 . - 0 ID=cds-HJH9165562.1;Parent=gene-O5D79_004165;Dbxref=NCBI_GP:HJH9165562.1;Name=HJH9165562.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460532.3;locus_tag=O5D79_004165;product=GFA family protein;protein_id=HJH9165562.1;transl_table=11 DALFDJ020000026.1 tpg gene 74016 75104 . - . ID=gene-O5D79_004166;Name=ompD;gbkey=Gene;gene=ompD;gene_biotype=protein_coding;locus_tag=O5D79_004166 DALFDJ020000026.1 Protein Homology CDS 74016 75104 . - 0 ID=cds-HJH9165563.1;Parent=gene-O5D79_004166;Dbxref=NCBI_GP:HJH9165563.1;Name=HJH9165563.1;gbkey=CDS;gene=ompD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=O5D79_004166;product=porin OmpD;protein_id=HJH9165563.1;transl_table=11 DALFDJ020000026.1 tpg gene 75628 76509 . - . ID=gene-O5D79_004167;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=O5D79_004167 DALFDJ020000026.1 Protein Homology CDS 75628 76509 . - 0 ID=cds-HJH9165564.1;Parent=gene-O5D79_004167;Dbxref=NCBI_GP:HJH9165564.1;Name=HJH9165564.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203799.1;locus_tag=O5D79_004167;product=aromatic amino acid efflux DMT transporter YddG;protein_id=HJH9165564.1;transl_table=11 DALFDJ020000026.1 tpg gene 76787 79834 . + . ID=gene-O5D79_004168;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=O5D79_004168 DALFDJ020000026.1 Protein Homology CDS 76787 79834 . + 0 ID=cds-HJH9165565.1;Parent=gene-O5D79_004168;Dbxref=NCBI_GP:HJH9165565.1;Name=HJH9165565.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=O5D79_004168;product=formate dehydrogenase-N subunit alpha;protein_id=HJH9165565.1;transl_except=(pos:77372..77374%2Caa:Sec);transl_table=11 DALFDJ020000026.1 tpg gene 79848 80732 . + . ID=gene-O5D79_004169;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=O5D79_004169 DALFDJ020000026.1 Protein Homology CDS 79848 80732 . + 0 ID=cds-HJH9165566.1;Parent=gene-O5D79_004169;Dbxref=NCBI_GP:HJH9165566.1;Name=HJH9165566.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460528.1;locus_tag=O5D79_004169;product=formate dehydrogenase subunit beta;protein_id=HJH9165566.1;transl_table=11 DALFDJ020000026.1 tpg gene 80725 81381 . + . ID=gene-O5D79_004170;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=O5D79_004170 DALFDJ020000026.1 Protein Homology CDS 80725 81381 . + 0 ID=cds-HJH9165567.1;Parent=gene-O5D79_004170;Dbxref=NCBI_GP:HJH9165567.1;Name=HJH9165567.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460527.1;locus_tag=O5D79_004170;product=formate dehydrogenase-N subunit gamma;protein_id=HJH9165567.1;transl_table=11 DALFDJ020000026.1 tpg gene 81480 82490 . - . ID=gene-O5D79_004171;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=O5D79_004171 DALFDJ020000026.1 Protein Homology CDS 81480 82490 . - 0 ID=cds-HJH9165568.1;Parent=gene-O5D79_004171;Dbxref=NCBI_GP:HJH9165568.1;Name=HJH9165568.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460526.1;locus_tag=O5D79_004171;product=alcohol dehydrogenase AdhP;protein_id=HJH9165568.1;transl_table=11 DALFDJ020000026.1 tpg gene 82772 84469 . - . ID=gene-O5D79_004172;Name=O5D79_004172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004172 DALFDJ020000026.1 Protein Homology CDS 82772 84469 . - 0 ID=cds-HJH9165569.1;Parent=gene-O5D79_004172;Dbxref=NCBI_GP:HJH9165569.1;Name=HJH9165569.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460525.1;locus_tag=O5D79_004172;product=NAD-dependent malic enzyme;protein_id=HJH9165569.1;transl_table=11 DALFDJ020000026.1 tpg gene 84646 84789 . - . ID=gene-O5D79_004173;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=O5D79_004173 DALFDJ020000026.1 Protein Homology CDS 84646 84789 . - 0 ID=cds-HJH9165570.1;Parent=gene-O5D79_004173;Dbxref=NCBI_GP:HJH9165570.1;Name=HJH9165570.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460524.1;locus_tag=O5D79_004173;product=stationary-phase-induced ribosome-associated protein;protein_id=HJH9165570.1;transl_table=11 DALFDJ020000026.1 tpg gene 84884 85099 . - . ID=gene-O5D79_004174;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=O5D79_004174 DALFDJ020000026.1 Protein Homology CDS 84884 85099 . - 0 ID=cds-HJH9165571.1;Parent=gene-O5D79_004174;Dbxref=NCBI_GP:HJH9165571.1;Name=HJH9165571.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460523.1;locus_tag=O5D79_004174;product=biofilm-dependent modulation protein;protein_id=HJH9165571.1;transl_table=11 ##sequence-region DALFDJ020000027.1 1 78440 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000027.1 tpg region 1 78440 . + . ID=DALFDJ020000027.1:1..78440;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000027.1 tpg gene 1 200 . - . ID=gene-O5D79_004175;Name=O5D79_004175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004175;partial=true;start_range=.,1 DALFDJ020000027.1 Protein Homology CDS 1 200 . - 0 ID=cds-HJH9165572.1;Parent=gene-O5D79_004175;Dbxref=NCBI_GP:HJH9165572.1;Name=HJH9165572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461195.1;locus_tag=O5D79_004175;partial=true;product=cytochrome c biogenesis protein;protein_id=HJH9165572.1;start_range=.,1;transl_table=11 DALFDJ020000027.1 tpg gene 252 911 . - . ID=gene-O5D79_004176;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=O5D79_004176 DALFDJ020000027.1 Protein Homology CDS 252 911 . - 0 ID=cds-HJH9165573.1;Parent=gene-O5D79_004176;Dbxref=NCBI_GP:HJH9165573.1;Name=HJH9165573.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461196.1;locus_tag=O5D79_004176;product=heme exporter protein CcmB;protein_id=HJH9165573.1;transl_table=11 DALFDJ020000027.1 tpg gene 908 1525 . - . ID=gene-O5D79_004177;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=O5D79_004177 DALFDJ020000027.1 Protein Homology CDS 908 1525 . - 0 ID=cds-HJH9165574.1;Parent=gene-O5D79_004177;Dbxref=NCBI_GP:HJH9165574.1;Name=HJH9165574.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462719.1;locus_tag=O5D79_004177;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=HJH9165574.1;transl_table=11 DALFDJ020000027.1 tpg gene 1531 2931 . - . ID=gene-O5D79_004178;Name=O5D79_004178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004178 DALFDJ020000027.1 Protein Homology CDS 1531 2931 . - 0 ID=cds-HJH9165575.1;Parent=gene-O5D79_004178;Dbxref=NCBI_GP:HJH9165575.1;Name=HJH9165575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462720.1;locus_tag=O5D79_004178;product=cytochrome-c peroxidase;protein_id=HJH9165575.1;transl_table=11 DALFDJ020000027.1 tpg gene 3121 3753 . - . ID=gene-O5D79_004179;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=O5D79_004179 DALFDJ020000027.1 Protein Homology CDS 3121 3753 . - 0 ID=cds-HJH9165576.1;Parent=gene-O5D79_004179;Dbxref=NCBI_GP:HJH9165576.1;Name=HJH9165576.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462721.1;locus_tag=O5D79_004179;product=molecular chaperone TorD;protein_id=HJH9165576.1;transl_table=11 DALFDJ020000027.1 tpg gene 3746 6298 . - . ID=gene-O5D79_004180;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=O5D79_004180 DALFDJ020000027.1 Protein Homology CDS 3746 6298 . - 0 ID=cds-HJH9165577.1;Parent=gene-O5D79_004180;Dbxref=NCBI_GP:HJH9165577.1;Name=HJH9165577.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462722.1;locus_tag=O5D79_004180;product=trimethylamine-N-oxide reductase TorA;protein_id=HJH9165577.1;transl_table=11 DALFDJ020000027.1 tpg gene 6288 7472 . - . ID=gene-O5D79_004181;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=O5D79_004181 DALFDJ020000027.1 Protein Homology CDS 6288 7472 . - 0 ID=cds-HJH9165578.1;Parent=gene-O5D79_004181;Dbxref=NCBI_GP:HJH9165578.1;Name=HJH9165578.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462723.1;locus_tag=O5D79_004181;product=pentaheme c-type cytochrome TorC;protein_id=HJH9165578.1;transl_table=11 DALFDJ020000027.1 tpg gene 7602 8294 . + . ID=gene-O5D79_004182;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=O5D79_004182 DALFDJ020000027.1 Protein Homology CDS 7602 8294 . + 0 ID=cds-HJH9165579.1;Parent=gene-O5D79_004182;Dbxref=NCBI_GP:HJH9165579.1;Name=HJH9165579.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462724.1;locus_tag=O5D79_004182;product=two-component system response regulator TorR;protein_id=HJH9165579.1;transl_table=11 DALFDJ020000027.1 tpg gene 8267 9307 . - . ID=gene-O5D79_004183;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=O5D79_004183 DALFDJ020000027.1 Protein Homology CDS 8267 9307 . - 0 ID=cds-HJH9165580.1;Parent=gene-O5D79_004183;Dbxref=NCBI_GP:HJH9165580.1;Name=HJH9165580.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462725.1;locus_tag=O5D79_004183;product=TMAO reductase system periplasmic protein TorT;protein_id=HJH9165580.1;transl_table=11 DALFDJ020000027.1 tpg gene 9387 12122 . + . ID=gene-O5D79_004184;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=O5D79_004184 DALFDJ020000027.1 Protein Homology CDS 9387 12122 . + 0 ID=cds-HJH9165581.1;Parent=gene-O5D79_004184;Dbxref=NCBI_GP:HJH9165581.1;Name=HJH9165581.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462726.1;locus_tag=O5D79_004184;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=HJH9165581.1;transl_table=11 DALFDJ020000027.1 tpg gene 12148 13485 . - . ID=gene-O5D79_004185;Name=O5D79_004185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004185 DALFDJ020000027.1 Protein Homology CDS 12148 13485 . - 0 ID=cds-HJH9165582.1;Parent=gene-O5D79_004185;Dbxref=NCBI_GP:HJH9165582.1;Name=HJH9165582.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462727.1;locus_tag=O5D79_004185;product=MFS transporter;protein_id=HJH9165582.1;transl_table=11 DALFDJ020000027.1 tpg gene 13570 14718 . - . ID=gene-O5D79_004186;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=O5D79_004186 DALFDJ020000027.1 Protein Homology CDS 13570 14718 . - 0 ID=cds-HJH9165583.1;Parent=gene-O5D79_004186;Dbxref=NCBI_GP:HJH9165583.1;Name=HJH9165583.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=O5D79_004186;product=galactonate dehydratase;protein_id=HJH9165583.1;transl_table=11 DALFDJ020000027.1 tpg gene 14715 15332 . - . ID=gene-O5D79_004187;Name=O5D79_004187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004187 DALFDJ020000027.1 Protein Homology CDS 14715 15332 . - 0 ID=cds-HJH9165584.1;Parent=gene-O5D79_004187;Dbxref=NCBI_GP:HJH9165584.1;Name=HJH9165584.1;Ontology_term=GO:0034194,GO:0008674;gbkey=CDS;go_function=2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity|0008674||IEA;go_process=D-galactonate catabolic process|0034194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229569.1;locus_tag=O5D79_004187;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=HJH9165584.1;transl_table=11 DALFDJ020000027.1 tpg gene 15316 16194 . - . ID=gene-O5D79_004188;Name=O5D79_004188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004188 DALFDJ020000027.1 Protein Homology CDS 15316 16194 . - 0 ID=cds-HJH9165585.1;Parent=gene-O5D79_004188;Dbxref=NCBI_GP:HJH9165585.1;Name=HJH9165585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462729.1;locus_tag=O5D79_004188;product=2-dehydro-3-deoxygalactonokinase;protein_id=HJH9165585.1;transl_table=11 DALFDJ020000027.1 tpg gene 16191 16880 . - . ID=gene-O5D79_004189;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=O5D79_004189 DALFDJ020000027.1 Protein Homology CDS 16191 16880 . - 0 ID=cds-HJH9165586.1;Parent=gene-O5D79_004189;Dbxref=NCBI_GP:HJH9165586.1;Name=HJH9165586.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462730.1;locus_tag=O5D79_004189;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=HJH9165586.1;transl_table=11 DALFDJ020000027.1 tpg gene 17140 17985 . - . ID=gene-O5D79_004190;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=O5D79_004190 DALFDJ020000027.1 Protein Homology CDS 17140 17985 . - 0 ID=cds-HJH9165587.1;Parent=gene-O5D79_004190;Dbxref=NCBI_GP:HJH9165587.1;Name=HJH9165587.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462731.1;locus_tag=O5D79_004190;product=sugar-phosphatase;protein_id=HJH9165587.1;transl_table=11 DALFDJ020000027.1 tpg gene 18290 19552 . + . ID=gene-O5D79_004191;Name=O5D79_004191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004191 DALFDJ020000027.1 Protein Homology CDS 18290 19552 . + 0 ID=cds-HJH9165588.1;Parent=gene-O5D79_004191;Dbxref=NCBI_GP:HJH9165588.1;Name=HJH9165588.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462732.1;locus_tag=O5D79_004191;product=MFS transporter;protein_id=HJH9165588.1;transl_table=11 DALFDJ020000027.1 tpg gene 19566 20759 . + . ID=gene-O5D79_004192;Name=O5D79_004192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004192 DALFDJ020000027.1 Protein Homology CDS 19566 20759 . + 0 ID=cds-HJH9165589.1;Parent=gene-O5D79_004192;Dbxref=NCBI_GP:HJH9165589.1;Name=HJH9165589.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462733.1;locus_tag=O5D79_004192;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=HJH9165589.1;transl_table=11 DALFDJ020000027.1 tpg gene 20874 21770 . + . ID=gene-O5D79_004193;Name=O5D79_004193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004193 DALFDJ020000027.1 Protein Homology CDS 20874 21770 . + 0 ID=cds-HJH9165590.1;Parent=gene-O5D79_004193;Dbxref=NCBI_GP:HJH9165590.1;Name=HJH9165590.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462734.1;locus_tag=O5D79_004193;product=LysR family transcriptional regulator;protein_id=HJH9165590.1;transl_table=11 DALFDJ020000027.1 tpg gene 21789 24203 . - . ID=gene-O5D79_004194;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=O5D79_004194 DALFDJ020000027.1 Protein Homology CDS 21789 24203 . - 0 ID=cds-HJH9165591.1;Parent=gene-O5D79_004194;Dbxref=NCBI_GP:HJH9165591.1;Name=HJH9165591.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=O5D79_004194;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=HJH9165591.1;transl_table=11 DALFDJ020000027.1 tpg gene 24232 25305 . - . ID=gene-O5D79_004195;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=O5D79_004195 DALFDJ020000027.1 Protein Homology CDS 24232 25305 . - 0 ID=cds-HJH9165592.1;Parent=gene-O5D79_004195;Dbxref=NCBI_GP:HJH9165592.1;Name=HJH9165592.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=O5D79_004195;product=DNA replication/repair protein RecF;protein_id=HJH9165592.1;transl_table=11 DALFDJ020000027.1 tpg gene 25503 26603 . - . ID=gene-O5D79_004196;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=O5D79_004196 DALFDJ020000027.1 Protein Homology CDS 25503 26603 . - 0 ID=cds-HJH9165593.1;Parent=gene-O5D79_004196;Dbxref=NCBI_GP:HJH9165593.1;Name=HJH9165593.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=O5D79_004196;product=DNA polymerase III subunit beta;protein_id=HJH9165593.1;transl_table=11 DALFDJ020000027.1 tpg gene 26608 28008 . - . ID=gene-O5D79_004197;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=O5D79_004197 DALFDJ020000027.1 Protein Homology CDS 26608 28008 . - 0 ID=cds-HJH9165594.1;Parent=gene-O5D79_004197;Dbxref=NCBI_GP:HJH9165594.1;Name=HJH9165594.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=O5D79_004197;product=chromosomal replication initiator protein DnaA;protein_id=HJH9165594.1;transl_table=11 DALFDJ020000027.1 tpg gene 28348 28440 . + . ID=gene-O5D79_004198;Name=O5D79_004198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004198 DALFDJ020000027.1 Protein Homology CDS 28348 28440 . + 0 ID=cds-HJH9165595.1;Parent=gene-O5D79_004198;Dbxref=NCBI_GP:HJH9165595.1;Name=HJH9165595.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048187.1;locus_tag=O5D79_004198;product=hypothetical protein;protein_id=HJH9165595.1;transl_table=11 DALFDJ020000027.1 tpg gene 28669 28809 . + . ID=gene-O5D79_004199;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=O5D79_004199 DALFDJ020000027.1 Protein Homology CDS 28669 28809 . + 0 ID=cds-HJH9165596.1;Parent=gene-O5D79_004199;Dbxref=NCBI_GP:HJH9165596.1;Name=HJH9165596.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=O5D79_004199;product=50S ribosomal protein L34;protein_id=HJH9165596.1;transl_table=11 DALFDJ020000027.1 tpg gene 28826 29185 . + . ID=gene-O5D79_004200;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=O5D79_004200 DALFDJ020000027.1 Protein Homology CDS 28826 29185 . + 0 ID=cds-HJH9165597.1;Parent=gene-O5D79_004200;Dbxref=NCBI_GP:HJH9165597.1;Name=HJH9165597.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=O5D79_004200;product=ribonuclease P protein component;protein_id=HJH9165597.1;transl_table=11 DALFDJ020000027.1 tpg gene 29149 29406 . + . ID=gene-O5D79_004201;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=O5D79_004201 DALFDJ020000027.1 Protein Homology CDS 29149 29406 . + 0 ID=cds-HJH9165598.1;Parent=gene-O5D79_004201;Dbxref=NCBI_GP:HJH9165598.1;Name=HJH9165598.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=O5D79_004201;product=membrane protein insertion efficiency factor YidD;protein_id=HJH9165598.1;transl_table=11 DALFDJ020000027.1 tpg gene 29409 31055 . + . ID=gene-O5D79_004202;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=O5D79_004202 DALFDJ020000027.1 Protein Homology CDS 29409 31055 . + 0 ID=cds-HJH9165599.1;Parent=gene-O5D79_004202;Dbxref=NCBI_GP:HJH9165599.1;Name=HJH9165599.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=O5D79_004202;product=membrane protein insertase YidC;protein_id=HJH9165599.1;transl_table=11 DALFDJ020000027.1 tpg gene 31198 32562 . + . ID=gene-O5D79_004203;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=O5D79_004203 DALFDJ020000027.1 Protein Homology CDS 31198 32562 . + 0 ID=cds-HJH9165600.1;Parent=gene-O5D79_004203;Dbxref=NCBI_GP:HJH9165600.1;Name=HJH9165600.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=O5D79_004203;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=HJH9165600.1;transl_table=11 DALFDJ020000027.1 tpg gene 32745 33932 . + . ID=gene-O5D79_004204;Name=O5D79_004204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004204 DALFDJ020000027.1 Protein Homology CDS 32745 33932 . + 0 ID=cds-HJH9165601.1;Parent=gene-O5D79_004204;Dbxref=NCBI_GP:HJH9165601.1;Name=HJH9165601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462746.1;locus_tag=O5D79_004204;product=MFS transporter;protein_id=HJH9165601.1;transl_table=11 DALFDJ020000027.1 tpg gene 33901 34860 . + . ID=gene-O5D79_004205;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=O5D79_004205 DALFDJ020000027.1 Protein Homology CDS 33901 34860 . + 0 ID=cds-HJH9165602.1;Parent=gene-O5D79_004205;Dbxref=NCBI_GP:HJH9165602.1;Name=HJH9165602.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462747.1;locus_tag=O5D79_004205;product=HTH-type transcriptional regulator YidZ;protein_id=HJH9165602.1;transl_table=11 DALFDJ020000027.1 tpg gene 35018 35773 . + . ID=gene-O5D79_004206;Name=O5D79_004206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004206 DALFDJ020000027.1 Protein Homology CDS 35018 35773 . + 0 ID=cds-HJH9165603.1;Parent=gene-O5D79_004206;Dbxref=NCBI_GP:HJH9165603.1;Name=HJH9165603.1;Ontology_term=GO:0008897;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462748.1;locus_tag=O5D79_004206;product=4'-phosphopantetheinyl transferase family protein;protein_id=HJH9165603.1;transl_table=11 DALFDJ020000027.1 tpg gene 35773 36357 . + . ID=gene-O5D79_004207;Name=O5D79_004207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004207 DALFDJ020000027.1 Protein Homology CDS 35773 36357 . + 0 ID=cds-HJH9165604.1;Parent=gene-O5D79_004207;Dbxref=NCBI_GP:HJH9165604.1;Name=HJH9165604.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462749.3;locus_tag=O5D79_004207;product=NADPH-dependent FMN reductase;protein_id=HJH9165604.1;transl_table=11 DALFDJ020000027.1 tpg gene 36402 37739 . - . ID=gene-O5D79_004208;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=O5D79_004208 DALFDJ020000027.1 Protein Homology CDS 36402 37739 . - 0 ID=cds-HJH9165605.1;Parent=gene-O5D79_004208;Dbxref=NCBI_GP:HJH9165605.1;Name=HJH9165605.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=O5D79_004208;product=adenine permease AdeP;protein_id=HJH9165605.1;transl_table=11 DALFDJ020000027.1 tpg gene 37908 38573 . + . ID=gene-O5D79_004209;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=O5D79_004209 DALFDJ020000027.1 Protein Homology CDS 37908 38573 . + 0 ID=cds-HJH9165606.1;Parent=gene-O5D79_004209;Dbxref=NCBI_GP:HJH9165606.1;Name=HJH9165606.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462751.1;locus_tag=O5D79_004209;product=6-phosphogluconate phosphatase;protein_id=HJH9165606.1;transl_table=11 DALFDJ020000027.1 tpg gene 38668 39393 . - . ID=gene-O5D79_004210;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=O5D79_004210 DALFDJ020000027.1 Protein Homology CDS 38668 39393 . - 0 ID=cds-HJH9165607.1;Parent=gene-O5D79_004210;Dbxref=NCBI_GP:HJH9165607.1;Name=HJH9165607.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462752.1;locus_tag=O5D79_004210;product=phosphate signaling complex protein PhoU;protein_id=HJH9165607.1;transl_table=11 DALFDJ020000027.1 tpg gene 39408 40181 . - . ID=gene-O5D79_004211;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=O5D79_004211 DALFDJ020000027.1 Protein Homology CDS 39408 40181 . - 0 ID=cds-HJH9165608.1;Parent=gene-O5D79_004211;Dbxref=NCBI_GP:HJH9165608.1;Name=HJH9165608.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=O5D79_004211;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=HJH9165608.1;transl_table=11 DALFDJ020000027.1 tpg gene 40268 41158 . - . ID=gene-O5D79_004212;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=O5D79_004212 DALFDJ020000027.1 Protein Homology CDS 40268 41158 . - 0 ID=cds-HJH9165609.1;Parent=gene-O5D79_004212;Dbxref=NCBI_GP:HJH9165609.1;Name=HJH9165609.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462754.1;locus_tag=O5D79_004212;product=phosphate ABC transporter permease PstA;protein_id=HJH9165609.1;transl_table=11 DALFDJ020000027.1 tpg gene 41158 42117 . - . ID=gene-O5D79_004213;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=O5D79_004213 DALFDJ020000027.1 Protein Homology CDS 41158 42117 . - 0 ID=cds-HJH9165610.1;Parent=gene-O5D79_004213;Dbxref=NCBI_GP:HJH9165610.1;Name=HJH9165610.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=O5D79_004213;product=phosphate ABC transporter permease PstC;protein_id=HJH9165610.1;transl_table=11 DALFDJ020000027.1 tpg gene 42253 43293 . - . ID=gene-O5D79_004214;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=O5D79_004214 DALFDJ020000027.1 Protein Homology CDS 42253 43293 . - 0 ID=cds-HJH9165611.1;Parent=gene-O5D79_004214;Dbxref=NCBI_GP:HJH9165611.1;Name=HJH9165611.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=O5D79_004214;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=HJH9165611.1;transl_table=11 DALFDJ020000027.1 tpg gene 43460 44833 . - . ID=gene-O5D79_004215;Name=O5D79_004215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004215 DALFDJ020000027.1 Protein Homology CDS 43460 44833 . - 0 ID=cds-HJH9165612.1;Parent=gene-O5D79_004215;Dbxref=NCBI_GP:HJH9165612.1;Name=HJH9165612.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462757.1;locus_tag=O5D79_004215;product=fructose-specific PTS transporter subunit EIIC;protein_id=HJH9165612.1;transl_table=11 DALFDJ020000027.1 tpg gene 44882 45700 . - . ID=gene-O5D79_004216;Name=O5D79_004216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004216 DALFDJ020000027.1 Protein Homology CDS 44882 45700 . - 0 ID=cds-HJH9165613.1;Parent=gene-O5D79_004216;Dbxref=NCBI_GP:HJH9165613.1;Name=HJH9165613.1;Ontology_term=GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462758.1;locus_tag=O5D79_004216;product=shikimate 5-dehydrogenase;protein_id=HJH9165613.1;transl_table=11 DALFDJ020000027.1 tpg gene 45795 47552 . + . ID=gene-O5D79_004217;Name=O5D79_004217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004217 DALFDJ020000027.1 Protein Homology CDS 45795 47552 . + 0 ID=cds-HJH9165614.1;Parent=gene-O5D79_004217;Dbxref=NCBI_GP:HJH9165614.1;Name=HJH9165614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462759.1;locus_tag=O5D79_004217;product=SgrR family transcriptional regulator;protein_id=HJH9165614.1;transl_table=11 DALFDJ020000027.1 tpg gene 47702 49531 . - . ID=gene-O5D79_004218;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=O5D79_004218 DALFDJ020000027.1 Protein Homology CDS 47702 49531 . - 0 ID=cds-HJH9165615.1;Parent=gene-O5D79_004218;Dbxref=NCBI_GP:HJH9165615.1;Name=HJH9165615.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=O5D79_004218;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=HJH9165615.1;transl_table=11 DALFDJ020000027.1 tpg gene 49720 51090 . - . ID=gene-O5D79_004219;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=O5D79_004219 DALFDJ020000027.1 Protein Homology CDS 49720 51090 . - 0 ID=cds-HJH9165616.1;Parent=gene-O5D79_004219;Dbxref=NCBI_GP:HJH9165616.1;Name=HJH9165616.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462761.1;locus_tag=O5D79_004219;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=HJH9165616.1;transl_table=11 DALFDJ020000027.1 tpg gene 51410 52108 . - . ID=gene-O5D79_004220;Name=O5D79_004220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004220 DALFDJ020000027.1 Protein Homology CDS 51410 52108 . - 0 ID=cds-HJH9165617.1;Parent=gene-O5D79_004220;Dbxref=NCBI_GP:HJH9165617.1;Name=HJH9165617.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462762.1;locus_tag=O5D79_004220;product=Bax inhibitor-1/YccA family protein;protein_id=HJH9165617.1;transl_table=11 DALFDJ020000027.1 tpg gene 52338 52757 . - . ID=gene-O5D79_004221;Name=O5D79_004221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004221 DALFDJ020000027.1 Protein Homology CDS 52338 52757 . - 0 ID=cds-HJH9165618.1;Parent=gene-O5D79_004221;Dbxref=NCBI_GP:HJH9165618.1;Name=HJH9165618.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=O5D79_004221;product=F0F1 ATP synthase subunit epsilon;protein_id=HJH9165618.1;transl_table=11 DALFDJ020000027.1 tpg gene 52778 54160 . - . ID=gene-O5D79_004222;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=O5D79_004222 DALFDJ020000027.1 Protein Homology CDS 52778 54160 . - 0 ID=cds-HJH9165619.1;Parent=gene-O5D79_004222;Dbxref=NCBI_GP:HJH9165619.1;Name=HJH9165619.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=O5D79_004222;product=F0F1 ATP synthase subunit beta;protein_id=HJH9165619.1;transl_table=11 DALFDJ020000027.1 tpg gene 54187 55050 . - . ID=gene-O5D79_004223;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=O5D79_004223 DALFDJ020000027.1 Protein Homology CDS 54187 55050 . - 0 ID=cds-HJH9165620.1;Parent=gene-O5D79_004223;Dbxref=NCBI_GP:HJH9165620.1;Name=HJH9165620.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=O5D79_004223;product=F0F1 ATP synthase subunit gamma;protein_id=HJH9165620.1;transl_table=11 DALFDJ020000027.1 tpg gene 55101 56642 . - . ID=gene-O5D79_004224;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=O5D79_004224 DALFDJ020000027.1 Protein Homology CDS 55101 56642 . - 0 ID=cds-HJH9165621.1;Parent=gene-O5D79_004224;Dbxref=NCBI_GP:HJH9165621.1;Name=HJH9165621.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=O5D79_004224;product=F0F1 ATP synthase subunit alpha;protein_id=HJH9165621.1;transl_table=11 DALFDJ020000027.1 tpg gene 56655 57188 . - . ID=gene-O5D79_004225;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=O5D79_004225 DALFDJ020000027.1 Protein Homology CDS 56655 57188 . - 0 ID=cds-HJH9165622.1;Parent=gene-O5D79_004225;Dbxref=NCBI_GP:HJH9165622.1;Name=HJH9165622.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=O5D79_004225;product=F0F1 ATP synthase subunit delta;protein_id=HJH9165622.1;transl_table=11 DALFDJ020000027.1 tpg gene 57203 57673 . - . ID=gene-O5D79_004226;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=O5D79_004226 DALFDJ020000027.1 Protein Homology CDS 57203 57673 . - 0 ID=cds-HJH9165623.1;Parent=gene-O5D79_004226;Dbxref=NCBI_GP:HJH9165623.1;Name=HJH9165623.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=O5D79_004226;product=F0F1 ATP synthase subunit B;protein_id=HJH9165623.1;transl_table=11 DALFDJ020000027.1 tpg gene 57733 57972 . - . ID=gene-O5D79_004227;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=O5D79_004227 DALFDJ020000027.1 Protein Homology CDS 57733 57972 . - 0 ID=cds-HJH9165624.1;Parent=gene-O5D79_004227;Dbxref=NCBI_GP:HJH9165624.1;Name=HJH9165624.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=O5D79_004227;product=F0F1 ATP synthase subunit C;protein_id=HJH9165624.1;transl_table=11 DALFDJ020000027.1 tpg gene 58019 58834 . - . ID=gene-O5D79_004228;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=O5D79_004228 DALFDJ020000027.1 Protein Homology CDS 58019 58834 . - 0 ID=cds-HJH9165625.1;Parent=gene-O5D79_004228;Dbxref=NCBI_GP:HJH9165625.1;Name=HJH9165625.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=O5D79_004228;product=F0F1 ATP synthase subunit A;protein_id=HJH9165625.1;transl_table=11 DALFDJ020000027.1 tpg gene 58843 59223 . - . ID=gene-O5D79_004229;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=O5D79_004229 DALFDJ020000027.1 Protein Homology CDS 58843 59223 . - 0 ID=cds-HJH9165626.1;Parent=gene-O5D79_004229;Dbxref=NCBI_GP:HJH9165626.1;Name=HJH9165626.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462771.1;locus_tag=O5D79_004229;product=F0F1 ATP synthase subunit I;protein_id=HJH9165626.1;transl_table=11 DALFDJ020000027.1 tpg gene 59839 60462 . - . ID=gene-O5D79_004230;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=O5D79_004230 DALFDJ020000027.1 Protein Homology CDS 59839 60462 . - 0 ID=cds-HJH9165627.1;Parent=gene-O5D79_004230;Dbxref=NCBI_GP:HJH9165627.1;Name=HJH9165627.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462772.3;locus_tag=O5D79_004230;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=HJH9165627.1;transl_table=11 DALFDJ020000027.1 tpg gene 60565 62454 . - . ID=gene-O5D79_004231;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=O5D79_004231 DALFDJ020000027.1 Protein Homology CDS 60565 62454 . - 0 ID=cds-HJH9165628.1;Parent=gene-O5D79_004231;Dbxref=NCBI_GP:HJH9165628.1;Name=HJH9165628.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=O5D79_004231;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=HJH9165628.1;transl_table=11 DALFDJ020000027.1 tpg gene 62833 63276 . - . ID=gene-O5D79_004232;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=O5D79_004232 DALFDJ020000027.1 Protein Homology CDS 62833 63276 . - 0 ID=cds-HJH9165629.1;Parent=gene-O5D79_004232;Dbxref=NCBI_GP:HJH9165629.1;Name=HJH9165629.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462774.1;locus_tag=O5D79_004232;product=FMN-binding protein MioC;protein_id=HJH9165629.1;transl_table=11 DALFDJ020000027.1 tpg gene 63366 63824 . - . ID=gene-O5D79_004233;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=O5D79_004233 DALFDJ020000027.1 Protein Homology CDS 63366 63824 . - 0 ID=cds-HJH9165630.1;Parent=gene-O5D79_004233;Dbxref=NCBI_GP:HJH9165630.1;Name=HJH9165630.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462775.1;locus_tag=O5D79_004233;product=transcriptional regulator AsnC;protein_id=HJH9165630.1;transl_table=11 DALFDJ020000027.1 tpg gene 63975 64967 . + . ID=gene-O5D79_004234;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=O5D79_004234 DALFDJ020000027.1 Protein Homology CDS 63975 64967 . + 0 ID=cds-HJH9165631.1;Parent=gene-O5D79_004234;Dbxref=NCBI_GP:HJH9165631.1;Name=HJH9165631.1;Ontology_term=GO:0006529,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462776.1;locus_tag=O5D79_004234;product=aspartate--ammonia ligase;protein_id=HJH9165631.1;transl_table=11 DALFDJ020000027.1 tpg gene 64972 66423 . - . ID=gene-O5D79_004235;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=O5D79_004235 DALFDJ020000027.1 Protein Homology CDS 64972 66423 . - 0 ID=cds-HJH9165632.1;Parent=gene-O5D79_004235;Dbxref=NCBI_GP:HJH9165632.1;Name=HJH9165632.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=O5D79_004235;product=ATPase RavA stimulator ViaA;protein_id=HJH9165632.1;transl_table=11 DALFDJ020000027.1 tpg gene 66417 67913 . - . ID=gene-O5D79_004236;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=O5D79_004236 DALFDJ020000027.1 Protein Homology CDS 66417 67913 . - 0 ID=cds-HJH9165633.1;Parent=gene-O5D79_004236;Dbxref=NCBI_GP:HJH9165633.1;Name=HJH9165633.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462778.1;locus_tag=O5D79_004236;product=ATPase RavA;protein_id=HJH9165633.1;transl_table=11 DALFDJ020000027.1 tpg gene 68261 70129 . + . ID=gene-O5D79_004237;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=O5D79_004237 DALFDJ020000027.1 Protein Homology CDS 68261 70129 . + 0 ID=cds-HJH9165634.1;Parent=gene-O5D79_004237;Dbxref=NCBI_GP:HJH9165634.1;Name=HJH9165634.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=O5D79_004237;product=low affinity potassium transporter Kup;protein_id=HJH9165634.1;transl_table=11 DALFDJ020000027.1 tpg gene 70326 70745 . + . ID=gene-O5D79_004238;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=O5D79_004238 DALFDJ020000027.1 Protein Homology CDS 70326 70745 . + 0 ID=cds-HJH9165635.1;Parent=gene-O5D79_004238;Dbxref=NCBI_GP:HJH9165635.1;Name=HJH9165635.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462780.1;locus_tag=O5D79_004238;product=D-ribose pyranase;protein_id=HJH9165635.1;transl_table=11 DALFDJ020000027.1 tpg gene 70753 72258 . + . ID=gene-O5D79_004239;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=O5D79_004239 DALFDJ020000027.1 Protein Homology CDS 70753 72258 . + 0 ID=cds-HJH9165636.1;Parent=gene-O5D79_004239;Dbxref=NCBI_GP:HJH9165636.1;Name=HJH9165636.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462781.1;locus_tag=O5D79_004239;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=HJH9165636.1;transl_table=11 DALFDJ020000027.1 tpg gene 72264 73229 . + . ID=gene-O5D79_004240;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=O5D79_004240 DALFDJ020000027.1 Protein Homology CDS 72264 73229 . + 0 ID=cds-HJH9165637.1;Parent=gene-O5D79_004240;Dbxref=NCBI_GP:HJH9165637.1;Name=HJH9165637.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=O5D79_004240;product=ribose ABC transporter permease;protein_id=HJH9165637.1;transl_table=11 DALFDJ020000027.1 tpg gene 73254 74144 . + . ID=gene-O5D79_004241;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=O5D79_004241 DALFDJ020000027.1 Protein Homology CDS 73254 74144 . + 0 ID=cds-HJH9165638.1;Parent=gene-O5D79_004241;Dbxref=NCBI_GP:HJH9165638.1;Name=HJH9165638.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462783.1;locus_tag=O5D79_004241;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=HJH9165638.1;transl_table=11 DALFDJ020000027.1 tpg gene 74277 75206 . + . ID=gene-O5D79_004242;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=O5D79_004242 DALFDJ020000027.1 Protein Homology CDS 74277 75206 . + 0 ID=cds-HJH9165639.1;Parent=gene-O5D79_004242;Dbxref=NCBI_GP:HJH9165639.1;Name=HJH9165639.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462784.1;locus_tag=O5D79_004242;product=ribokinase;protein_id=HJH9165639.1;transl_table=11 DALFDJ020000027.1 tpg gene 75210 76208 . + . ID=gene-O5D79_004243;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=O5D79_004243 DALFDJ020000027.1 Protein Homology CDS 75210 76208 . + 0 ID=cds-HJH9165640.1;Parent=gene-O5D79_004243;Dbxref=NCBI_GP:HJH9165640.1;Name=HJH9165640.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462785.1;locus_tag=O5D79_004243;product=ribose operon transcriptional repressor RbsR;protein_id=HJH9165640.1;transl_table=11 DALFDJ020000027.1 tpg gene 76174 77601 . - . ID=gene-O5D79_004244;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=O5D79_004244 DALFDJ020000027.1 Protein Homology CDS 76174 77601 . - 0 ID=cds-HJH9165641.1;Parent=gene-O5D79_004244;Dbxref=NCBI_GP:HJH9165641.1;Name=HJH9165641.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462786.1;locus_tag=O5D79_004244;product=multidrug transporter subunit MdtD;protein_id=HJH9165641.1;transl_table=11 DALFDJ020000027.1 tpg gene 77613 78317 . - . ID=gene-O5D79_004245;Name=O5D79_004245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004245 DALFDJ020000027.1 Protein Homology CDS 77613 78317 . - 0 ID=cds-HJH9165642.1;Parent=gene-O5D79_004245;Dbxref=NCBI_GP:HJH9165642.1;Name=HJH9165642.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462787.1;locus_tag=O5D79_004245;product=FadR/GntR family transcriptional regulator;protein_id=HJH9165642.1;transl_table=11 ##sequence-region DALFDJ020000028.1 1 77034 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000028.1 tpg region 1 77034 . + . ID=DALFDJ020000028.1:1..77034;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000028.1 tpg gene 569 1249 . - . ID=gene-O5D79_004246;Name=pipA;gbkey=Gene;gene=pipA;gene_biotype=protein_coding;locus_tag=O5D79_004246 DALFDJ020000028.1 Protein Homology CDS 569 1249 . - 0 ID=cds-HJH9165643.1;Parent=gene-O5D79_004246;Dbxref=NCBI_GP:HJH9165643.1;Name=HJH9165643.1;gbkey=CDS;gene=pipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460060.1;locus_tag=O5D79_004246;product=type III secretion system effector protease PipA;protein_id=HJH9165643.1;transl_table=11 DALFDJ020000028.1 tpg gene 1471 2346 . - . ID=gene-O5D79_004247;Name=pipB;gbkey=Gene;gene=pipB;gene_biotype=protein_coding;locus_tag=O5D79_004247 DALFDJ020000028.1 Protein Homology CDS 1471 2346 . - 0 ID=cds-HJH9165644.1;Parent=gene-O5D79_004247;Dbxref=NCBI_GP:HJH9165644.1;Name=HJH9165644.1;gbkey=CDS;gene=pipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460061.1;locus_tag=O5D79_004247;product=SPI-2 type III secretion system effector PipB;protein_id=HJH9165644.1;transl_table=11 DALFDJ020000028.1 tpg gene 2918 3142 . - . ID=gene-O5D79_004248;Name=O5D79_004248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004248 DALFDJ020000028.1 Protein Homology CDS 2918 3142 . - 0 ID=cds-HJH9165645.1;Parent=gene-O5D79_004248;Dbxref=NCBI_GP:HJH9165645.1;Name=HJH9165645.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026627.6;locus_tag=O5D79_004248;product=PagK family vesicle-borne virulence factor;protein_id=HJH9165645.1;transl_table=11 DALFDJ020000028.1 tpg gene 3178 3498 . + . ID=gene-O5D79_004249;Name=O5D79_004249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004249 DALFDJ020000028.1 Protein Homology CDS 3178 3498 . + 0 ID=cds-HJH9165646.1;Parent=gene-O5D79_004249;Dbxref=NCBI_GP:HJH9165646.1;Name=HJH9165646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460062.1;locus_tag=O5D79_004249;product=hypothetical protein;protein_id=HJH9165646.1;transl_table=11 DALFDJ020000028.1 tpg gene 3508 3849 . - . ID=gene-O5D79_004250;Name=sigE;gbkey=Gene;gene=sigE;gene_biotype=protein_coding;locus_tag=O5D79_004250 DALFDJ020000028.1 Protein Homology CDS 3508 3849 . - 0 ID=cds-HJH9165647.1;Parent=gene-O5D79_004250;Dbxref=NCBI_GP:HJH9165647.1;Name=HJH9165647.1;gbkey=CDS;gene=sigE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460063.1;locus_tag=O5D79_004250;product=type III secretion system chaperone SigE;protein_id=HJH9165647.1;transl_table=11 DALFDJ020000028.1 tpg gene 3866 5551 . - . ID=gene-O5D79_004251;Name=sopB;gbkey=Gene;gene=sopB;gene_biotype=protein_coding;locus_tag=O5D79_004251 DALFDJ020000028.1 Protein Homology CDS 3866 5551 . - 0 ID=cds-HJH9165648.1;Parent=gene-O5D79_004251;Dbxref=NCBI_GP:HJH9165648.1;Name=HJH9165648.1;gbkey=CDS;gene=sopB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460064.1;locus_tag=O5D79_004251;product=SPI-1 type III secretion system effector inositol phosphate phosphatase SopB;protein_id=HJH9165648.1;transl_table=11 DALFDJ020000028.1 tpg gene 5884 6054 . + . ID=gene-O5D79_004252;Name=O5D79_004252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004252 DALFDJ020000028.1 Protein Homology CDS 5884 6054 . + 0 ID=cds-HJH9165649.1;Parent=gene-O5D79_004252;Dbxref=NCBI_GP:HJH9165649.1;Name=HJH9165649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460065.1;locus_tag=O5D79_004252;product=YlcI/YnfO family protein;protein_id=HJH9165649.1;transl_table=11 DALFDJ020000028.1 tpg gene 6055 6165 . - . ID=gene-O5D79_004253;Name=O5D79_004253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004253 DALFDJ020000028.1 Protein Homology CDS 6055 6165 . - 0 ID=cds-HJH9165650.1;Parent=gene-O5D79_004253;Dbxref=NCBI_GP:HJH9165650.1;Name=HJH9165650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447525.1;locus_tag=O5D79_004253;product=hypothetical protein;protein_id=HJH9165650.1;transl_table=11 DALFDJ020000028.1 tpg gene 6274 7743 . - . ID=gene-O5D79_004254;Name=O5D79_004254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004254 DALFDJ020000028.1 Protein Homology CDS 6274 7743 . - 0 ID=cds-HJH9165651.1;Parent=gene-O5D79_004254;Dbxref=NCBI_GP:HJH9165651.1;Name=HJH9165651.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460067.1;locus_tag=O5D79_004254;product=C69 family dipeptidase;protein_id=HJH9165651.1;transl_table=11 DALFDJ020000028.1 tpg gene 7916 9280 . - . ID=gene-O5D79_004255;Name=O5D79_004255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004255 DALFDJ020000028.1 Protein Homology CDS 7916 9280 . - 0 ID=cds-HJH9165652.1;Parent=gene-O5D79_004255;Dbxref=NCBI_GP:HJH9165652.1;Name=HJH9165652.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447527.1;locus_tag=O5D79_004255;product=heavy metal sensor histidine kinase;protein_id=HJH9165652.1;transl_table=11 DALFDJ020000028.1 tpg gene 9273 9953 . - . ID=gene-O5D79_004256;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=O5D79_004256 DALFDJ020000028.1 Protein Homology CDS 9273 9953 . - 0 ID=cds-HJH9165653.1;Parent=gene-O5D79_004256;Dbxref=NCBI_GP:HJH9165653.1;Name=HJH9165653.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000698203.1;locus_tag=O5D79_004256;product=response regulator transcription factor HprR;protein_id=HJH9165653.1;transl_table=11 DALFDJ020000028.1 tpg gene 10089 10499 . + . ID=gene-O5D79_004257;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=O5D79_004257 DALFDJ020000028.1 Protein Homology CDS 10089 10499 . + 0 ID=cds-HJH9165654.1;Parent=gene-O5D79_004257;Dbxref=NCBI_GP:HJH9165654.1;Name=HJH9165654.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460070.1;locus_tag=O5D79_004257;product=hydroxyisourate hydrolase;protein_id=HJH9165654.1;transl_table=11 DALFDJ020000028.1 tpg gene 10832 11344 . - . ID=gene-O5D79_004258;Name=O5D79_004258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004258 DALFDJ020000028.1 Protein Homology CDS 10832 11344 . - 0 ID=cds-HJH9165655.1;Parent=gene-O5D79_004258;Dbxref=NCBI_GP:HJH9165655.1;Name=HJH9165655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460071.1;locus_tag=O5D79_004258;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=HJH9165655.1;transl_table=11 DALFDJ020000028.1 tpg gene 11362 12924 . - . ID=gene-O5D79_004259;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=O5D79_004259 DALFDJ020000028.1 Protein Homology CDS 11362 12924 . - 0 ID=cds-HJH9165656.1;Parent=gene-O5D79_004259;Dbxref=NCBI_GP:HJH9165656.1;Name=HJH9165656.1;Ontology_term=GO:0010124,GO:0016712,GO:0050660;gbkey=CDS;gene=hpaB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C reduced flavin or flavoprotein as one donor%2C and incorporation of one atom of oxygen|0016712||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=O5D79_004259;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=HJH9165656.1;transl_table=11 DALFDJ020000028.1 tpg gene 13142 13582 . - . ID=gene-O5D79_004260;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=O5D79_004260 DALFDJ020000028.1 Protein Homology CDS 13142 13582 . - 0 ID=cds-HJH9165657.1;Parent=gene-O5D79_004260;Dbxref=NCBI_GP:HJH9165657.1;Name=HJH9165657.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460073.1;locus_tag=O5D79_004260;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=HJH9165657.1;transl_table=11 DALFDJ020000028.1 tpg gene 13858 15147 . + . ID=gene-O5D79_004261;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=O5D79_004261 DALFDJ020000028.1 Protein Homology CDS 13858 15147 . + 0 ID=cds-HJH9165658.1;Parent=gene-O5D79_004261;Dbxref=NCBI_GP:HJH9165658.1;Name=HJH9165658.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460074.1;locus_tag=O5D79_004261;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=HJH9165658.1;transl_table=11 DALFDJ020000028.1 tpg gene 15144 16610 . + . ID=gene-O5D79_004262;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=O5D79_004262 DALFDJ020000028.1 Protein Homology CDS 15144 16610 . + 0 ID=cds-HJH9165659.1;Parent=gene-O5D79_004262;Dbxref=NCBI_GP:HJH9165659.1;Name=HJH9165659.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=O5D79_004262;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=HJH9165659.1;transl_table=11 DALFDJ020000028.1 tpg gene 16612 17463 . + . ID=gene-O5D79_004263;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=O5D79_004263 DALFDJ020000028.1 Protein Homology CDS 16612 17463 . + 0 ID=cds-HJH9165660.1;Parent=gene-O5D79_004263;Dbxref=NCBI_GP:HJH9165660.1;Name=HJH9165660.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=O5D79_004263;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=HJH9165660.1;transl_table=11 DALFDJ020000028.1 tpg gene 17473 17853 . + . ID=gene-O5D79_004264;Name=O5D79_004264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004264 DALFDJ020000028.1 Protein Homology CDS 17473 17853 . + 0 ID=cds-HJH9165661.1;Parent=gene-O5D79_004264;Dbxref=NCBI_GP:HJH9165661.1;Name=HJH9165661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=O5D79_004264;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=HJH9165661.1;transl_table=11 DALFDJ020000028.1 tpg gene 17997 18800 . + . ID=gene-O5D79_004265;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=O5D79_004265 DALFDJ020000028.1 Protein Homology CDS 17997 18800 . + 0 ID=cds-HJH9165662.1;Parent=gene-O5D79_004265;Dbxref=NCBI_GP:HJH9165662.1;Name=HJH9165662.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460078.1;locus_tag=O5D79_004265;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=HJH9165662.1;transl_table=11 DALFDJ020000028.1 tpg gene 18811 19602 . + . ID=gene-O5D79_004266;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=O5D79_004266 DALFDJ020000028.1 Protein Homology CDS 18811 19602 . + 0 ID=cds-HJH9165663.1;Parent=gene-O5D79_004266;Dbxref=NCBI_GP:HJH9165663.1;Name=HJH9165663.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460079.1;locus_tag=O5D79_004266;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=HJH9165663.1;transl_table=11 DALFDJ020000028.1 tpg gene 19675 21051 . + . ID=gene-O5D79_004267;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=O5D79_004267 DALFDJ020000028.1 Protein Homology CDS 19675 21051 . + 0 ID=cds-HJH9165664.1;Parent=gene-O5D79_004267;Dbxref=NCBI_GP:HJH9165664.1;Name=HJH9165664.1;Ontology_term=GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460080.1;locus_tag=O5D79_004267;product=4-hydroxyphenylacetate permease;protein_id=HJH9165664.1;transl_table=11 DALFDJ020000028.1 tpg gene 21061 21957 . + . ID=gene-O5D79_004268;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=O5D79_004268 DALFDJ020000028.1 Protein Homology CDS 21061 21957 . + 0 ID=cds-HJH9165665.1;Parent=gene-O5D79_004268;Dbxref=NCBI_GP:HJH9165665.1;Name=HJH9165665.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460081.1;locus_tag=O5D79_004268;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=HJH9165665.1;transl_table=11 DALFDJ020000028.1 tpg gene 21971 22909 . + . ID=gene-O5D79_004269;Name=O5D79_004269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004269 DALFDJ020000028.1 Protein Homology CDS 21971 22909 . + 0 ID=cds-HJH9165666.1;Parent=gene-O5D79_004269;Dbxref=NCBI_GP:HJH9165666.1;Name=HJH9165666.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460082.1;locus_tag=O5D79_004269;product=MBL fold metallo-hydrolase;protein_id=HJH9165666.1;transl_table=11 DALFDJ020000028.1 tpg gene 23317 23679 . - . ID=gene-O5D79_004270;Name=O5D79_004270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004270 DALFDJ020000028.1 Protein Homology CDS 23317 23679 . - 0 ID=cds-HJH9165667.1;Parent=gene-O5D79_004270;Dbxref=NCBI_GP:HJH9165667.1;Name=HJH9165667.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460083.1;locus_tag=O5D79_004270;product=anti-adapter protein IraM;protein_id=HJH9165667.1;transl_table=11 DALFDJ020000028.1 tpg gene 24333 24638 . - . ID=gene-O5D79_004271;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=O5D79_004271 DALFDJ020000028.1 Protein Homology CDS 24333 24638 . - 0 ID=cds-HJH9165668.1;Parent=gene-O5D79_004271;Dbxref=NCBI_GP:HJH9165668.1;Name=HJH9165668.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460084.1;locus_tag=O5D79_004271;product=chaperone modulator CbpM;protein_id=HJH9165668.1;transl_table=11 DALFDJ020000028.1 tpg gene 24638 25558 . - . ID=gene-O5D79_004272;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=O5D79_004272 DALFDJ020000028.1 Protein Homology CDS 24638 25558 . - 0 ID=cds-HJH9165669.1;Parent=gene-O5D79_004272;Dbxref=NCBI_GP:HJH9165669.1;Name=HJH9165669.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460085.1;locus_tag=O5D79_004272;product=curved DNA-binding protein;protein_id=HJH9165669.1;transl_table=11 DALFDJ020000028.1 tpg gene 25793 26155 . + . ID=gene-O5D79_004273;Name=O5D79_004273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004273 DALFDJ020000028.1 Protein Homology CDS 25793 26155 . + 0 ID=cds-HJH9165670.1;Parent=gene-O5D79_004273;Dbxref=NCBI_GP:HJH9165670.1;Name=HJH9165670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460086.1;locus_tag=O5D79_004273;product=copper resistance protein;protein_id=HJH9165670.1;transl_table=11 DALFDJ020000028.1 tpg gene 26204 28090 . + . ID=gene-O5D79_004274;Name=O5D79_004274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004274 DALFDJ020000028.1 Protein Homology CDS 26204 28090 . + 0 ID=cds-HJH9165671.1;Parent=gene-O5D79_004274;Dbxref=NCBI_GP:HJH9165671.1;Name=HJH9165671.1;Ontology_term=GO:0009055,GO:0015036;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460087.1;locus_tag=O5D79_004274;product=protein-disulfide reductase DsbD family protein;protein_id=HJH9165671.1;transl_table=11 DALFDJ020000028.1 tpg gene 28087 28710 . + . ID=gene-O5D79_004275;Name=O5D79_004275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004275 DALFDJ020000028.1 Protein Homology CDS 28087 28710 . + 0 ID=cds-HJH9165672.1;Parent=gene-O5D79_004275;Dbxref=NCBI_GP:HJH9165672.1;Name=HJH9165672.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460088.1;locus_tag=O5D79_004275;product=DsbA family protein;protein_id=HJH9165672.1;transl_table=11 DALFDJ020000028.1 tpg gene 28700 29206 . + . ID=gene-O5D79_004276;Name=O5D79_004276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004276 DALFDJ020000028.1 Protein Homology CDS 28700 29206 . + 0 ID=cds-HJH9165673.1;Parent=gene-O5D79_004276;Dbxref=NCBI_GP:HJH9165673.1;Name=HJH9165673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460089.1;locus_tag=O5D79_004276;product=protein disulfide oxidoreductase;protein_id=HJH9165673.1;transl_table=11 DALFDJ020000028.1 tpg gene 29339 30580 . + . ID=gene-O5D79_004277;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=O5D79_004277 DALFDJ020000028.1 Protein Homology CDS 29339 30580 . + 0 ID=cds-HJH9165674.1;Parent=gene-O5D79_004277;Dbxref=NCBI_GP:HJH9165674.1;Name=HJH9165674.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460090.1;locus_tag=O5D79_004277;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=HJH9165674.1;transl_table=11 DALFDJ020000028.1 tpg gene 30614 30841 . - . ID=gene-O5D79_004278;Name=O5D79_004278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004278 DALFDJ020000028.1 Protein Homology CDS 30614 30841 . - 0 ID=cds-HJH9165675.1;Parent=gene-O5D79_004278;Dbxref=NCBI_GP:HJH9165675.1;Name=HJH9165675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=O5D79_004278;product=YccJ family protein;protein_id=HJH9165675.1;transl_table=11 DALFDJ020000028.1 tpg gene 30862 31458 . - . ID=gene-O5D79_004279;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=O5D79_004279 DALFDJ020000028.1 Protein Homology CDS 30862 31458 . - 0 ID=cds-HJH9165676.1;Parent=gene-O5D79_004279;Dbxref=NCBI_GP:HJH9165676.1;Name=HJH9165676.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460092.1;locus_tag=O5D79_004279;product=NAD(P)H:quinone oxidoreductase;protein_id=HJH9165676.1;transl_table=11 DALFDJ020000028.1 tpg gene 31843 32010 . + . ID=gene-O5D79_004280;Name=O5D79_004280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004280 DALFDJ020000028.1 Protein Homology CDS 31843 32010 . + 0 ID=cds-HJH9165677.1;Parent=gene-O5D79_004280;Dbxref=NCBI_GP:HJH9165677.1;Name=HJH9165677.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460093.1;locus_tag=O5D79_004280;product=general stress protein;protein_id=HJH9165677.1;transl_table=11 DALFDJ020000028.1 tpg gene 32147 32785 . + . ID=gene-O5D79_004281;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=O5D79_004281 DALFDJ020000028.1 Protein Homology CDS 32147 32785 . + 0 ID=cds-HJH9165678.1;Parent=gene-O5D79_004281;Dbxref=NCBI_GP:HJH9165678.1;Name=HJH9165678.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460094.1;locus_tag=O5D79_004281;product=HTH-type transcriptional regulator RutR;protein_id=HJH9165678.1;transl_table=11 DALFDJ020000028.1 tpg gene 32782 33177 . - . ID=gene-O5D79_004282;Name=O5D79_004282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004282 DALFDJ020000028.1 Protein Homology CDS 32782 33177 . - 0 ID=cds-HJH9165679.1;Parent=gene-O5D79_004282;Dbxref=NCBI_GP:HJH9165679.1;Name=HJH9165679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460095.1;locus_tag=O5D79_004282;product=lysozyme inhibitor LprI family protein;protein_id=HJH9165679.1;transl_table=11 DALFDJ020000028.1 tpg gene 33236 37198 . - . ID=gene-O5D79_004283;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=O5D79_004283 DALFDJ020000028.1 Protein Homology CDS 33236 37198 . - 0 ID=cds-HJH9165680.1;Parent=gene-O5D79_004283;Dbxref=NCBI_GP:HJH9165680.1;Name=HJH9165680.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_447555.1;locus_tag=O5D79_004283;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=HJH9165680.1;transl_table=11 DALFDJ020000028.1 tpg gene 37619 39127 . + . ID=gene-O5D79_004284;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=O5D79_004284 DALFDJ020000028.1 Protein Homology CDS 37619 39127 . + 0 ID=cds-HJH9165681.1;Parent=gene-O5D79_004284;Dbxref=NCBI_GP:HJH9165681.1;Name=HJH9165681.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460097.1;locus_tag=O5D79_004284;product=sodium/proline symporter PutP;protein_id=HJH9165681.1;transl_table=11 DALFDJ020000028.1 tpg gene 40020 40808 . + . ID=gene-O5D79_004285;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=O5D79_004285 DALFDJ020000028.1 Protein Homology CDS 40020 40808 . + 0 ID=cds-HJH9165682.1;Parent=gene-O5D79_004285;Dbxref=NCBI_GP:HJH9165682.1;Name=HJH9165682.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=O5D79_004285;product=phosphate starvation-inducible protein PhoH;protein_id=HJH9165682.1;transl_table=11 DALFDJ020000028.1 tpg gene 40913 41794 . - . ID=gene-O5D79_004286;Name=O5D79_004286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004286 DALFDJ020000028.1 Protein Homology CDS 40913 41794 . - 0 ID=cds-HJH9165683.1;Parent=gene-O5D79_004286;Dbxref=NCBI_GP:HJH9165683.1;Name=HJH9165683.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460099.1;locus_tag=O5D79_004286;product=MurR/RpiR family transcriptional regulator;protein_id=HJH9165683.1;transl_table=11 DALFDJ020000028.1 tpg gene 42080 43576 . - . ID=gene-O5D79_004287;Name=O5D79_004287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004287 DALFDJ020000028.1 Protein Homology CDS 42080 43576 . - 0 ID=cds-HJH9165684.1;Parent=gene-O5D79_004287;Dbxref=NCBI_GP:HJH9165684.1;Name=HJH9165684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460100.1;locus_tag=O5D79_004287;product=sodium:solute symporter;protein_id=HJH9165684.1;transl_table=11 DALFDJ020000028.1 tpg gene 43913 44593 . - . ID=gene-O5D79_004288;Name=O5D79_004288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004288 DALFDJ020000028.1 Protein Homology CDS 43913 44593 . - 0 ID=cds-HJH9165685.1;Parent=gene-O5D79_004288;Dbxref=NCBI_GP:HJH9165685.1;Name=HJH9165685.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460101.1;locus_tag=O5D79_004288;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=HJH9165685.1;transl_table=11 DALFDJ020000028.1 tpg gene 45099 46259 . + . ID=gene-O5D79_004289;Name=O5D79_004289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004289 DALFDJ020000028.1 Protein Homology CDS 45099 46259 . + 0 ID=cds-HJH9165686.1;Parent=gene-O5D79_004289;Dbxref=NCBI_GP:HJH9165686.1;Name=HJH9165686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460102.1;locus_tag=O5D79_004289;product=N-acetylneuraminate epimerase;protein_id=HJH9165686.1;transl_table=11 DALFDJ020000028.1 tpg gene 46305 46997 . + . ID=gene-O5D79_004290;Name=O5D79_004290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004290 DALFDJ020000028.1 Protein Homology CDS 46305 46997 . + 0 ID=cds-HJH9165687.1;Parent=gene-O5D79_004290;Dbxref=NCBI_GP:HJH9165687.1;Name=HJH9165687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460103.1;locus_tag=O5D79_004290;product=oligogalacturonate-specific porin KdgM family protein;protein_id=HJH9165687.1;transl_table=11 DALFDJ020000028.1 tpg gene 47280 48560 . + . ID=gene-O5D79_004291;Name=O5D79_004291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004291 DALFDJ020000028.1 Protein Homology CDS 47280 48560 . + 0 ID=cds-HJH9165688.1;Parent=gene-O5D79_004291;Dbxref=NCBI_GP:HJH9165688.1;Name=HJH9165688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460104.1;locus_tag=O5D79_004291;product=MFS transporter;protein_id=HJH9165688.1;transl_table=11 DALFDJ020000028.1 tpg gene 48571 49677 . + . ID=gene-O5D79_004292;Name=O5D79_004292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004292 DALFDJ020000028.1 Protein Homology CDS 48571 49677 . + 0 ID=cds-HJH9165689.1;Parent=gene-O5D79_004292;Dbxref=NCBI_GP:HJH9165689.1;Name=HJH9165689.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460105.1;locus_tag=O5D79_004292;product=Gfo/Idh/MocA family protein;protein_id=HJH9165689.1;transl_table=11 DALFDJ020000028.1 tpg pseudogene 49844 50136 . - . ID=gene-O5D79_004293;Name=O5D79_004293;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004293;pseudo=true DALFDJ020000028.1 Protein Homology CDS 49844 50136 . - 0 ID=cds-O5D79_004293;Parent=gene-O5D79_004293;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806398.1;locus_tag=O5D79_004293;product=YciI family protein;pseudo=true;transl_table=11 DALFDJ020000028.1 tpg gene 50215 50385 . + . ID=gene-O5D79_004294;Name=O5D79_004294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004294 DALFDJ020000028.1 Protein Homology CDS 50215 50385 . + 0 ID=cds-HJH9165690.1;Parent=gene-O5D79_004294;Dbxref=NCBI_GP:HJH9165690.1;Name=HJH9165690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574160.1;locus_tag=O5D79_004294;product=hypothetical protein;protein_id=HJH9165690.1;transl_table=11 DALFDJ020000028.1 tpg gene 50988 51446 . - . ID=gene-O5D79_004295;Name=O5D79_004295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004295 DALFDJ020000028.1 Protein Homology CDS 50988 51446 . - 0 ID=cds-HJH9165691.1;Parent=gene-O5D79_004295;Dbxref=NCBI_GP:HJH9165691.1;Name=HJH9165691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000623372.1;locus_tag=O5D79_004295;product=lysozyme inhibitor LprI family protein;protein_id=HJH9165691.1;transl_table=11 DALFDJ020000028.1 tpg gene 51570 51941 . - . ID=gene-O5D79_004296;Name=O5D79_004296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004296 DALFDJ020000028.1 Protein Homology CDS 51570 51941 . - 0 ID=cds-HJH9165692.1;Parent=gene-O5D79_004296;Dbxref=NCBI_GP:HJH9165692.1;Name=HJH9165692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747240.1;locus_tag=O5D79_004296;product=hypothetical protein;protein_id=HJH9165692.1;transl_table=11 DALFDJ020000028.1 tpg gene 51950 52390 . - . ID=gene-O5D79_004297;Name=O5D79_004297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004297 DALFDJ020000028.1 Protein Homology CDS 51950 52390 . - 0 ID=cds-HJH9165693.1;Parent=gene-O5D79_004297;Dbxref=NCBI_GP:HJH9165693.1;Name=HJH9165693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001022123.1;locus_tag=O5D79_004297;product=hypothetical protein;protein_id=HJH9165693.1;transl_table=11 DALFDJ020000028.1 tpg gene 52410 53282 . - . ID=gene-O5D79_004298;Name=O5D79_004298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004298 DALFDJ020000028.1 Protein Homology CDS 52410 53282 . - 0 ID=cds-HJH9165694.1;Parent=gene-O5D79_004298;Dbxref=NCBI_GP:HJH9165694.1;Name=HJH9165694.1;Ontology_term=GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712141.1;locus_tag=O5D79_004298;product=LysM peptidoglycan-binding domain-containing protein;protein_id=HJH9165694.1;transl_table=11 DALFDJ020000028.1 tpg gene 53315 53794 . - . ID=gene-O5D79_004299;Name=O5D79_004299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004299 DALFDJ020000028.1 Protein Homology CDS 53315 53794 . - 0 ID=cds-HJH9165695.1;Parent=gene-O5D79_004299;Dbxref=NCBI_GP:HJH9165695.1;Name=HJH9165695.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284963.1;locus_tag=O5D79_004299;product=Hcp family type VI secretion system effector;protein_id=HJH9165695.1;transl_table=11 DALFDJ020000028.1 tpg gene 53810 55174 . - . ID=gene-O5D79_004300;Name=impA;gbkey=Gene;gene=impA;gene_biotype=protein_coding;locus_tag=O5D79_004300 DALFDJ020000028.1 Protein Homology CDS 53810 55174 . - 0 ID=cds-HJH9165696.1;Parent=gene-O5D79_004300;Dbxref=NCBI_GP:HJH9165696.1;Name=HJH9165696.1;gbkey=CDS;gene=impA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000076066.1;locus_tag=O5D79_004300;product=type VI secretion system protein impA;protein_id=HJH9165696.1;transl_table=11 DALFDJ020000028.1 tpg gene 55185 58694 . - . ID=gene-O5D79_004301;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=O5D79_004301 DALFDJ020000028.1 Protein Homology CDS 55185 58694 . - 0 ID=cds-HJH9165697.1;Parent=gene-O5D79_004301;Dbxref=NCBI_GP:HJH9165697.1;Name=HJH9165697.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssM;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001612399.1;locus_tag=O5D79_004301;product=type VI secretion system membrane subunit TssM;protein_id=HJH9165697.1;transl_table=11 DALFDJ020000028.1 tpg gene 58713 60125 . - . ID=gene-O5D79_004302;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=O5D79_004302 DALFDJ020000028.1 Protein Homology CDS 58713 60125 . - 0 ID=cds-HJH9165698.1;Parent=gene-O5D79_004302;Dbxref=NCBI_GP:HJH9165698.1;Name=HJH9165698.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752219.1;locus_tag=O5D79_004302;product=type VI secretion system protein TssA;protein_id=HJH9165698.1;transl_table=11 DALFDJ020000028.1 tpg gene 60127 60864 . - . ID=gene-O5D79_004303;Name=vasI;gbkey=Gene;gene=vasI;gene_biotype=protein_coding;locus_tag=O5D79_004303 DALFDJ020000028.1 Protein Homology CDS 60127 60864 . - 0 ID=cds-HJH9165699.1;Parent=gene-O5D79_004303;Dbxref=NCBI_GP:HJH9165699.1;Name=HJH9165699.1;gbkey=CDS;gene=vasI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089149.1;locus_tag=O5D79_004303;product=type VI secretion system-associated protein VasI;protein_id=HJH9165699.1;transl_table=11 DALFDJ020000028.1 tpg gene 60861 63623 . - . ID=gene-O5D79_004304;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=O5D79_004304 DALFDJ020000028.1 Protein Homology CDS 60861 63623 . - 0 ID=cds-HJH9165700.1;Parent=gene-O5D79_004304;Dbxref=NCBI_GP:HJH9165700.1;Name=HJH9165700.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308250.1;locus_tag=O5D79_004304;product=type VI secretion system ATPase TssH;protein_id=HJH9165700.1;transl_table=11 DALFDJ020000028.1 tpg gene 63636 64394 . - . ID=gene-O5D79_004305;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=O5D79_004305 DALFDJ020000028.1 Protein Homology CDS 63636 64394 . - 0 ID=cds-HJH9165701.1;Parent=gene-O5D79_004305;Dbxref=NCBI_GP:HJH9165701.1;Name=HJH9165701.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343977.1;locus_tag=O5D79_004305;product=type IVB secretion system protein IcmH/DotU;protein_id=HJH9165701.1;transl_table=11 DALFDJ020000028.1 tpg gene 64399 65730 . - . ID=gene-O5D79_004306;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=O5D79_004306 DALFDJ020000028.1 Protein Homology CDS 64399 65730 . - 0 ID=cds-HJH9165702.1;Parent=gene-O5D79_004306;Dbxref=NCBI_GP:HJH9165702.1;Name=HJH9165702.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308252.1;locus_tag=O5D79_004306;product=type VI secretion system baseplate subunit TssK;protein_id=HJH9165702.1;transl_table=11 DALFDJ020000028.1 tpg gene 65733 66266 . - . ID=gene-O5D79_004307;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=O5D79_004307 DALFDJ020000028.1 Protein Homology CDS 65733 66266 . - 0 ID=cds-HJH9165703.1;Parent=gene-O5D79_004307;Dbxref=NCBI_GP:HJH9165703.1;Name=HJH9165703.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308253.1;locus_tag=O5D79_004307;product=type VI secretion system lipoprotein TssJ;protein_id=HJH9165703.1;transl_table=11 DALFDJ020000028.1 tpg gene 66263 67549 . - . ID=gene-O5D79_004308;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=O5D79_004308 DALFDJ020000028.1 Protein Homology CDS 66263 67549 . - 0 ID=cds-HJH9165704.1;Parent=gene-O5D79_004308;Dbxref=NCBI_GP:HJH9165704.1;Name=HJH9165704.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tagH;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308254.1;locus_tag=O5D79_004308;product=type VI secretion system-associated FHA domain protein TagH;protein_id=HJH9165704.1;transl_table=11 DALFDJ020000028.1 tpg gene 67574 68662 . - . ID=gene-O5D79_004309;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=O5D79_004309 DALFDJ020000028.1 Protein Homology CDS 67574 68662 . - 0 ID=cds-HJH9165705.1;Parent=gene-O5D79_004309;Dbxref=NCBI_GP:HJH9165705.1;Name=HJH9165705.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509052.1;locus_tag=O5D79_004309;product=type VI secretion system baseplate subunit TssG;protein_id=HJH9165705.1;transl_table=11 DALFDJ020000028.1 tpg gene 68626 70479 . - . ID=gene-O5D79_004310;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=O5D79_004310 DALFDJ020000028.1 Protein Homology CDS 68626 70479 . - 0 ID=cds-HJH9165706.1;Parent=gene-O5D79_004310;Dbxref=NCBI_GP:HJH9165706.1;Name=HJH9165706.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308256.1;locus_tag=O5D79_004310;product=type VI secretion system baseplate subunit TssF;protein_id=HJH9165706.1;transl_table=11 DALFDJ020000028.1 tpg gene 70484 70900 . - . ID=gene-O5D79_004311;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=O5D79_004311 DALFDJ020000028.1 Protein Homology CDS 70484 70900 . - 0 ID=cds-HJH9165707.1;Parent=gene-O5D79_004311;Dbxref=NCBI_GP:HJH9165707.1;Name=HJH9165707.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686004.1;locus_tag=O5D79_004311;product=type VI secretion system baseplate subunit TssE;protein_id=HJH9165707.1;transl_table=11 DALFDJ020000028.1 tpg gene 70897 72369 . - . ID=gene-O5D79_004312;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=O5D79_004312 DALFDJ020000028.1 Protein Homology CDS 70897 72369 . - 0 ID=cds-HJH9165708.1;Parent=gene-O5D79_004312;Dbxref=NCBI_GP:HJH9165708.1;Name=HJH9165708.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000056998.1;locus_tag=O5D79_004312;product=type VI secretion system contractile sheath large subunit;protein_id=HJH9165708.1;transl_table=11 DALFDJ020000028.1 tpg gene 72418 72630 . - . ID=gene-O5D79_004313;Name=O5D79_004313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004313 DALFDJ020000028.1 Protein Homology CDS 72418 72630 . - 0 ID=cds-HJH9165709.1;Parent=gene-O5D79_004313;Dbxref=NCBI_GP:HJH9165709.1;Name=HJH9165709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000524272.1;locus_tag=O5D79_004313;product=hypothetical protein;protein_id=HJH9165709.1;transl_table=11 DALFDJ020000028.1 tpg gene 72660 73163 . - . ID=gene-O5D79_004314;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=O5D79_004314 DALFDJ020000028.1 Protein Homology CDS 72660 73163 . - 0 ID=cds-HJH9165710.1;Parent=gene-O5D79_004314;Dbxref=NCBI_GP:HJH9165710.1;Name=HJH9165710.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308260.1;locus_tag=O5D79_004314;product=type VI secretion system contractile sheath small subunit;protein_id=HJH9165710.1;transl_table=11 DALFDJ020000028.1 tpg gene 73791 74309 . + . ID=gene-O5D79_004315;Name=O5D79_004315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004315 DALFDJ020000028.1 Protein Homology CDS 73791 74309 . + 0 ID=cds-HJH9165711.1;Parent=gene-O5D79_004315;Dbxref=NCBI_GP:HJH9165711.1;Name=HJH9165711.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308261.1;locus_tag=O5D79_004315;product=Hcp family type VI secretion system effector;protein_id=HJH9165711.1;transl_table=11 DALFDJ020000028.1 tpg gene 74532 76673 . + . ID=gene-O5D79_004316;Name=O5D79_004316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004316 DALFDJ020000028.1 Protein Homology CDS 74532 76673 . + 0 ID=cds-HJH9165712.1;Parent=gene-O5D79_004316;Dbxref=NCBI_GP:HJH9165712.1;Name=HJH9165712.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308263.1;locus_tag=O5D79_004316;product=type VI secretion system tip protein VgrG;protein_id=HJH9165712.1;transl_table=11 DALFDJ020000028.1 tpg gene 76742 77034 . + . ID=gene-O5D79_004317;Name=O5D79_004317;end_range=77034,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004317;partial=true DALFDJ020000028.1 Protein Homology CDS 76742 77034 . + 0 ID=cds-HJH9165713.1;Parent=gene-O5D79_004317;Dbxref=NCBI_GP:HJH9165713.1;Name=HJH9165713.1;end_range=77034,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014739.1;locus_tag=O5D79_004317;partial=true;product=DUF6531 domain-containing protein;protein_id=HJH9165713.1;transl_table=11 ##sequence-region DALFDJ020000029.1 1 62000 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000029.1 tpg region 1 62000 . + . ID=DALFDJ020000029.1:1..62000;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000029.1 tpg gene 320 880 . + . ID=gene-O5D79_004318;Name=stfA;gbkey=Gene;gene=stfA;gene_biotype=protein_coding;locus_tag=O5D79_004318 DALFDJ020000029.1 Protein Homology CDS 320 880 . + 0 ID=cds-HJH9165714.1;Parent=gene-O5D79_004318;Dbxref=NCBI_GP:HJH9165714.1;Name=HJH9165714.1;gbkey=CDS;gene=stfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459200.1;locus_tag=O5D79_004318;product=fimbrial major subunit StfA;protein_id=HJH9165714.1;transl_table=11 DALFDJ020000029.1 tpg gene 966 3623 . + . ID=gene-O5D79_004319;Name=O5D79_004319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004319 DALFDJ020000029.1 Protein Homology CDS 966 3623 . + 0 ID=cds-HJH9165715.1;Parent=gene-O5D79_004319;Dbxref=NCBI_GP:HJH9165715.1;Name=HJH9165715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459201.1;locus_tag=O5D79_004319;product=fimbrial biogenesis outer membrane usher protein;protein_id=HJH9165715.1;transl_table=11 DALFDJ020000029.1 tpg gene 3641 4393 . + . ID=gene-O5D79_004320;Name=stfD;gbkey=Gene;gene=stfD;gene_biotype=protein_coding;locus_tag=O5D79_004320 DALFDJ020000029.1 Protein Homology CDS 3641 4393 . + 0 ID=cds-HJH9165716.1;Parent=gene-O5D79_004320;Dbxref=NCBI_GP:HJH9165716.1;Name=HJH9165716.1;gbkey=CDS;gene=stfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459202.1;locus_tag=O5D79_004320;product=fimbrial chaperone StfD;protein_id=HJH9165716.1;transl_table=11 DALFDJ020000029.1 tpg gene 4412 4924 . + . ID=gene-O5D79_004321;Name=O5D79_004321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004321 DALFDJ020000029.1 Protein Homology CDS 4412 4924 . + 0 ID=cds-HJH9165717.1;Parent=gene-O5D79_004321;Dbxref=NCBI_GP:HJH9165717.1;Name=HJH9165717.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459203.1;locus_tag=O5D79_004321;product=fimbrial protein;protein_id=HJH9165717.1;transl_table=11 DALFDJ020000029.1 tpg gene 4921 5397 . + . ID=gene-O5D79_004322;Name=stfF;gbkey=Gene;gene=stfF;gene_biotype=protein_coding;locus_tag=O5D79_004322 DALFDJ020000029.1 Protein Homology CDS 4921 5397 . + 0 ID=cds-HJH9165718.1;Parent=gene-O5D79_004322;Dbxref=NCBI_GP:HJH9165718.1;Name=HJH9165718.1;gbkey=CDS;gene=stfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459204.1;locus_tag=O5D79_004322;product=fimbrial minor subunit StfF;protein_id=HJH9165718.1;transl_table=11 DALFDJ020000029.1 tpg gene 5397 5927 . + . ID=gene-O5D79_004323;Name=O5D79_004323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004323 DALFDJ020000029.1 Protein Homology CDS 5397 5927 . + 0 ID=cds-HJH9165719.1;Parent=gene-O5D79_004323;Dbxref=NCBI_GP:HJH9165719.1;Name=HJH9165719.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459205.1;locus_tag=O5D79_004323;product=fimbrial protein;protein_id=HJH9165719.1;transl_table=11 DALFDJ020000029.1 tpg gene 5927 6769 . + . ID=gene-O5D79_004324;Name=stfH;gbkey=Gene;gene=stfH;gene_biotype=protein_coding;locus_tag=O5D79_004324 DALFDJ020000029.1 Protein Homology CDS 5927 6769 . + 0 ID=cds-HJH9165720.1;Parent=gene-O5D79_004324;Dbxref=NCBI_GP:HJH9165720.1;Name=HJH9165720.1;gbkey=CDS;gene=stfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459206.1;locus_tag=O5D79_004324;product=fimbrial adhesin StfH;protein_id=HJH9165720.1;transl_table=11 DALFDJ020000029.1 tpg gene 6868 8148 . - . ID=gene-O5D79_004325;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=O5D79_004325 DALFDJ020000029.1 Protein Homology CDS 6868 8148 . - 0 ID=cds-HJH9165721.1;Parent=gene-O5D79_004325;Dbxref=NCBI_GP:HJH9165721.1;Name=HJH9165721.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=O5D79_004325;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=HJH9165721.1;transl_table=11 DALFDJ020000029.1 tpg gene 8318 9739 . + . ID=gene-O5D79_004326;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=O5D79_004326 DALFDJ020000029.1 Protein Homology CDS 8318 9739 . + 0 ID=cds-HJH9165722.1;Parent=gene-O5D79_004326;Dbxref=NCBI_GP:HJH9165722.1;Name=HJH9165722.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=O5D79_004326;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=HJH9165722.1;transl_table=11 DALFDJ020000029.1 tpg gene 9821 10165 . + . ID=gene-O5D79_004327;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=O5D79_004327 DALFDJ020000029.1 Protein Homology CDS 9821 10165 . + 0 ID=cds-HJH9165723.1;Parent=gene-O5D79_004327;Dbxref=NCBI_GP:HJH9165723.1;Name=HJH9165723.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=O5D79_004327;product=iron-sulfur cluster insertion protein ErpA;protein_id=HJH9165723.1;transl_table=11 DALFDJ020000029.1 tpg gene 10266 10889 . - . ID=gene-O5D79_004328;Name=O5D79_004328;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004328 DALFDJ020000029.1 Protein Homology CDS 10266 10889 . - 0 ID=cds-HJH9165724.1;Parent=gene-O5D79_004328;Dbxref=NCBI_GP:HJH9165724.1;Name=HJH9165724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459210.1;locus_tag=O5D79_004328;product=TRIC cation channel family protein;protein_id=HJH9165724.1;transl_table=11 DALFDJ020000029.1 tpg gene 10926 11726 . - . ID=gene-O5D79_004329;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=O5D79_004329 DALFDJ020000029.1 Protein Homology CDS 10926 11726 . - 0 ID=cds-HJH9165725.1;Parent=gene-O5D79_004329;Dbxref=NCBI_GP:HJH9165725.1;Name=HJH9165725.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459211.1;locus_tag=O5D79_004329;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=HJH9165725.1;transl_table=11 DALFDJ020000029.1 tpg gene 11719 12417 . - . ID=gene-O5D79_004330;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=O5D79_004330 DALFDJ020000029.1 Protein Homology CDS 11719 12417 . - 0 ID=cds-HJH9165726.1;Parent=gene-O5D79_004330;Dbxref=NCBI_GP:HJH9165726.1;Name=HJH9165726.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459212.1;locus_tag=O5D79_004330;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=HJH9165726.1;transl_table=11 DALFDJ020000029.1 tpg gene 12502 14019 . + . ID=gene-O5D79_004331;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=O5D79_004331 DALFDJ020000029.1 Protein Homology CDS 12502 14019 . + 0 ID=cds-HJH9165727.1;Parent=gene-O5D79_004331;Dbxref=NCBI_GP:HJH9165727.1;Name=HJH9165727.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459213.1;locus_tag=O5D79_004331;product=dGTPase;protein_id=HJH9165727.1;transl_table=11 DALFDJ020000029.1 tpg gene 14149 15576 . + . ID=gene-O5D79_004332;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=O5D79_004332 DALFDJ020000029.1 Protein Homology CDS 14149 15576 . + 0 ID=cds-HJH9165728.1;Parent=gene-O5D79_004332;Dbxref=NCBI_GP:HJH9165728.1;Name=HJH9165728.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=O5D79_004332;product=serine endoprotease DegP;protein_id=HJH9165728.1;transl_table=11 DALFDJ020000029.1 tpg gene 15729 16886 . + . ID=gene-O5D79_004333;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=O5D79_004333 DALFDJ020000029.1 Protein Homology CDS 15729 16886 . + 0 ID=cds-HJH9165729.1;Parent=gene-O5D79_004333;Dbxref=NCBI_GP:HJH9165729.1;Name=HJH9165729.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=O5D79_004333;product=DNA-binding transcriptional regulator CdaR;protein_id=HJH9165729.1;transl_table=11 DALFDJ020000029.1 tpg gene 17008 19977 . - . ID=gene-O5D79_004334;Name=O5D79_004334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004334 DALFDJ020000029.1 Protein Homology CDS 17008 19977 . - 0 ID=cds-HJH9165730.1;Parent=gene-O5D79_004334;Dbxref=NCBI_GP:HJH9165730.1;Name=HJH9165730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527551.1;locus_tag=O5D79_004334;product=putative mucin/carbohydrate-binding domain-containing protein;protein_id=HJH9165730.1;transl_table=11 DALFDJ020000029.1 tpg gene 20163 20549 . - . ID=gene-O5D79_004335;Name=O5D79_004335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004335 DALFDJ020000029.1 Protein Homology CDS 20163 20549 . - 0 ID=cds-HJH9165731.1;Parent=gene-O5D79_004335;Dbxref=NCBI_GP:HJH9165731.1;Name=HJH9165731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=O5D79_004335;product=DUF3461 family protein;protein_id=HJH9165731.1;transl_table=11 DALFDJ020000029.1 tpg gene 20796 22097 . + . ID=gene-O5D79_004336;Name=O5D79_004336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004336 DALFDJ020000029.1 Protein Homology CDS 20796 22097 . + 0 ID=cds-HJH9165732.1;Parent=gene-O5D79_004336;Dbxref=NCBI_GP:HJH9165732.1;Name=HJH9165732.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459217.1;locus_tag=O5D79_004336;product=MFS transporter;protein_id=HJH9165732.1;transl_table=11 DALFDJ020000029.1 tpg gene 22133 22957 . - . ID=gene-O5D79_004337;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=O5D79_004337 DALFDJ020000029.1 Protein Homology CDS 22133 22957 . - 0 ID=cds-HJH9165733.1;Parent=gene-O5D79_004337;Dbxref=NCBI_GP:HJH9165733.1;Name=HJH9165733.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=O5D79_004337;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=HJH9165733.1;transl_table=11 DALFDJ020000029.1 tpg gene 22987 25659 . - . ID=gene-O5D79_004338;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=O5D79_004338 DALFDJ020000029.1 Protein Homology CDS 22987 25659 . - 0 ID=cds-HJH9165734.1;Parent=gene-O5D79_004338;Dbxref=NCBI_GP:HJH9165734.1;Name=HJH9165734.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459219.1;locus_tag=O5D79_004338;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=HJH9165734.1;transl_table=11 DALFDJ020000029.1 tpg gene 25897 26691 . - . ID=gene-O5D79_004339;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=O5D79_004339 DALFDJ020000029.1 Protein Homology CDS 25897 26691 . - 0 ID=cds-HJH9165735.1;Parent=gene-O5D79_004339;Dbxref=NCBI_GP:HJH9165735.1;Name=HJH9165735.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459220.1;locus_tag=O5D79_004339;product=type I methionyl aminopeptidase;protein_id=HJH9165735.1;transl_table=11 DALFDJ020000029.1 tpg gene 27142 27867 . + . ID=gene-O5D79_004340;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=O5D79_004340 DALFDJ020000029.1 Protein Homology CDS 27142 27867 . + 0 ID=cds-HJH9165736.1;Parent=gene-O5D79_004340;Dbxref=NCBI_GP:HJH9165736.1;Name=HJH9165736.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=O5D79_004340;product=30S ribosomal protein S2;protein_id=HJH9165736.1;transl_table=11 DALFDJ020000029.1 tpg gene 28125 28976 . + . ID=gene-O5D79_004341;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=O5D79_004341 DALFDJ020000029.1 Protein Homology CDS 28125 28976 . + 0 ID=cds-HJH9165737.1;Parent=gene-O5D79_004341;Dbxref=NCBI_GP:HJH9165737.1;Name=HJH9165737.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=O5D79_004341;product=translation elongation factor Ts;protein_id=HJH9165737.1;transl_table=11 DALFDJ020000029.1 tpg gene 29121 29846 . + . ID=gene-O5D79_004342;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=O5D79_004342 DALFDJ020000029.1 Protein Homology CDS 29121 29846 . + 0 ID=cds-HJH9165738.1;Parent=gene-O5D79_004342;Dbxref=NCBI_GP:HJH9165738.1;Name=HJH9165738.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=O5D79_004342;product=UMP kinase;protein_id=HJH9165738.1;transl_table=11 DALFDJ020000029.1 tpg gene 29993 30550 . + . ID=gene-O5D79_004343;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=O5D79_004343 DALFDJ020000029.1 Protein Homology CDS 29993 30550 . + 0 ID=cds-HJH9165739.1;Parent=gene-O5D79_004343;Dbxref=NCBI_GP:HJH9165739.1;Name=HJH9165739.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=O5D79_004343;product=ribosome recycling factor;protein_id=HJH9165739.1;transl_table=11 DALFDJ020000029.1 tpg gene 30692 31888 . + . ID=gene-O5D79_004344;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=O5D79_004344 DALFDJ020000029.1 Protein Homology CDS 30692 31888 . + 0 ID=cds-HJH9165740.1;Parent=gene-O5D79_004344;Dbxref=NCBI_GP:HJH9165740.1;Name=HJH9165740.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459225.1;locus_tag=O5D79_004344;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=HJH9165740.1;transl_table=11 DALFDJ020000029.1 tpg gene 32201 32959 . + . ID=gene-O5D79_004345;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=O5D79_004345 DALFDJ020000029.1 Protein Homology CDS 32201 32959 . + 0 ID=cds-HJH9165741.1;Parent=gene-O5D79_004345;Dbxref=NCBI_GP:HJH9165741.1;Name=HJH9165741.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=O5D79_004345;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=HJH9165741.1;transl_table=11 DALFDJ020000029.1 tpg gene 32972 33829 . + . ID=gene-O5D79_004346;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=O5D79_004346 DALFDJ020000029.1 Protein Homology CDS 32972 33829 . + 0 ID=cds-HJH9165742.1;Parent=gene-O5D79_004346;Dbxref=NCBI_GP:HJH9165742.1;Name=HJH9165742.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459227.1;locus_tag=O5D79_004346;product=phosphatidate cytidylyltransferase;protein_id=HJH9165742.1;transl_table=11 DALFDJ020000029.1 tpg gene 33841 35193 . + . ID=gene-O5D79_004347;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=O5D79_004347 DALFDJ020000029.1 Protein Homology CDS 33841 35193 . + 0 ID=cds-HJH9165743.1;Parent=gene-O5D79_004347;Dbxref=NCBI_GP:HJH9165743.1;Name=HJH9165743.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=O5D79_004347;product=sigma E protease regulator RseP;protein_id=HJH9165743.1;transl_table=11 DALFDJ020000029.1 tpg gene 35225 37636 . + . ID=gene-O5D79_004348;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=O5D79_004348 DALFDJ020000029.1 Protein Homology CDS 35225 37636 . + 0 ID=cds-HJH9165744.1;Parent=gene-O5D79_004348;Dbxref=NCBI_GP:HJH9165744.1;Name=HJH9165744.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459229.1;locus_tag=O5D79_004348;product=outer membrane protein assembly factor BamA;protein_id=HJH9165744.1;transl_table=11 DALFDJ020000029.1 tpg gene 37759 38244 . + . ID=gene-O5D79_004349;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=O5D79_004349 DALFDJ020000029.1 Protein Homology CDS 37759 38244 . + 0 ID=cds-HJH9165745.1;Parent=gene-O5D79_004349;Dbxref=NCBI_GP:HJH9165745.1;Name=HJH9165745.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459230.1;locus_tag=O5D79_004349;product=molecular chaperone Skp;protein_id=HJH9165745.1;transl_table=11 DALFDJ020000029.1 tpg gene 38248 39273 . + . ID=gene-O5D79_004350;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=O5D79_004350 DALFDJ020000029.1 Protein Homology CDS 38248 39273 . + 0 ID=cds-HJH9165746.1;Parent=gene-O5D79_004350;Dbxref=NCBI_GP:HJH9165746.1;Name=HJH9165746.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=O5D79_004350;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=HJH9165746.1;transl_table=11 DALFDJ020000029.1 tpg gene 39379 39834 . + . ID=gene-O5D79_004351;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=O5D79_004351 DALFDJ020000029.1 Protein Homology CDS 39379 39834 . + 0 ID=cds-HJH9165747.1;Parent=gene-O5D79_004351;Dbxref=NCBI_GP:HJH9165747.1;Name=HJH9165747.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=O5D79_004351;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=HJH9165747.1;transl_table=11 DALFDJ020000029.1 tpg gene 39838 40626 . + . ID=gene-O5D79_004352;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=O5D79_004352 DALFDJ020000029.1 Protein Homology CDS 39838 40626 . + 0 ID=cds-HJH9165748.1;Parent=gene-O5D79_004352;Dbxref=NCBI_GP:HJH9165748.1;Name=HJH9165748.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=O5D79_004352;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=HJH9165748.1;transl_table=11 DALFDJ020000029.1 tpg gene 40626 41774 . + . ID=gene-O5D79_004353;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=O5D79_004353 DALFDJ020000029.1 Protein Homology CDS 40626 41774 . + 0 ID=cds-HJH9165749.1;Parent=gene-O5D79_004353;Dbxref=NCBI_GP:HJH9165749.1;Name=HJH9165749.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459234.1;locus_tag=O5D79_004353;product=lipid-A-disaccharide synthase;protein_id=HJH9165749.1;transl_table=11 DALFDJ020000029.1 tpg gene 41771 42367 . + . ID=gene-O5D79_004354;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=O5D79_004354 DALFDJ020000029.1 Protein Homology CDS 41771 42367 . + 0 ID=cds-HJH9165750.1;Parent=gene-O5D79_004354;Dbxref=NCBI_GP:HJH9165750.1;Name=HJH9165750.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459235.1;locus_tag=O5D79_004354;product=ribonuclease HII;protein_id=HJH9165750.1;transl_table=11 DALFDJ020000029.1 tpg gene 42391 45873 . + . ID=gene-O5D79_004355;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=O5D79_004355 DALFDJ020000029.1 Protein Homology CDS 42391 45873 . + 0 ID=cds-HJH9165751.1;Parent=gene-O5D79_004355;Dbxref=NCBI_GP:HJH9165751.1;Name=HJH9165751.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459236.1;locus_tag=O5D79_004355;product=DNA polymerase III subunit alpha;protein_id=HJH9165751.1;transl_table=11 DALFDJ020000029.1 tpg gene 45886 46845 . + . ID=gene-O5D79_004356;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=O5D79_004356 DALFDJ020000029.1 Protein Homology CDS 45886 46845 . + 0 ID=cds-HJH9165752.1;Parent=gene-O5D79_004356;Dbxref=NCBI_GP:HJH9165752.1;Name=HJH9165752.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=O5D79_004356;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=HJH9165752.1;transl_table=11 DALFDJ020000029.1 tpg gene 47025 48788 . + . ID=gene-O5D79_004357;Name=O5D79_004357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004357 DALFDJ020000029.1 Protein Homology CDS 47025 48788 . + 0 ID=cds-HJH9165753.1;Parent=gene-O5D79_004357;Dbxref=NCBI_GP:HJH9165753.1;Name=HJH9165753.1;Ontology_term=GO:0006032,GO:0016998,GO:0004568;gbkey=CDS;go_function=chitinase activity|0004568||IEA;go_process=chitin catabolic process|0006032||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459238.1;locus_tag=O5D79_004357;product=glycoside hydrolase family 19 protein;protein_id=HJH9165753.1;transl_table=11 DALFDJ020000029.1 tpg gene 48864 51005 . + . ID=gene-O5D79_004358;Name=O5D79_004358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004358 DALFDJ020000029.1 Protein Homology CDS 48864 51005 . + 0 ID=cds-HJH9165754.1;Parent=gene-O5D79_004358;Dbxref=NCBI_GP:HJH9165754.1;Name=HJH9165754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459239.1;locus_tag=O5D79_004358;product=lysine decarboxylase LdcC;protein_id=HJH9165754.1;transl_table=11 DALFDJ020000029.1 tpg gene 51061 51450 . + . ID=gene-O5D79_004359;Name=O5D79_004359;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004359 DALFDJ020000029.1 Protein Homology CDS 51061 51450 . + 0 ID=cds-HJH9165755.1;Parent=gene-O5D79_004359;Dbxref=NCBI_GP:HJH9165755.1;Name=HJH9165755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459240.1;locus_tag=O5D79_004359;product=VOC family protein;protein_id=HJH9165755.1;transl_table=11 DALFDJ020000029.1 tpg gene 51513 52805 . + . ID=gene-O5D79_004360;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=O5D79_004360 DALFDJ020000029.1 Protein Homology CDS 51513 52805 . + 0 ID=cds-HJH9165756.1;Parent=gene-O5D79_004360;Dbxref=NCBI_GP:HJH9165756.1;Name=HJH9165756.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459241.1;locus_tag=O5D79_004360;product=tRNA lysidine(34) synthetase TilS;protein_id=HJH9165756.1;transl_table=11 DALFDJ020000029.1 tpg gene 52889 53149 . - . ID=gene-O5D79_004361;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=O5D79_004361 DALFDJ020000029.1 Protein Homology CDS 52889 53149 . - 0 ID=cds-HJH9165757.1;Parent=gene-O5D79_004361;Dbxref=NCBI_GP:HJH9165757.1;Name=HJH9165757.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459242.1;locus_tag=O5D79_004361;product=Rho-binding antiterminator;protein_id=HJH9165757.1;transl_table=11 DALFDJ020000029.1 tpg gene 53136 53336 . - . ID=gene-O5D79_004362;Name=O5D79_004362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004362 DALFDJ020000029.1 Protein Homology CDS 53136 53336 . - 0 ID=cds-HJH9165758.1;Parent=gene-O5D79_004362;Dbxref=NCBI_GP:HJH9165758.1;Name=HJH9165758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=O5D79_004362;product=YaeP family protein;protein_id=HJH9165758.1;transl_table=11 DALFDJ020000029.1 tpg gene 53534 54079 . + . ID=gene-O5D79_004363;Name=O5D79_004363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004363 DALFDJ020000029.1 Protein Homology CDS 53534 54079 . + 0 ID=cds-HJH9165759.1;Parent=gene-O5D79_004363;Dbxref=NCBI_GP:HJH9165759.1;Name=HJH9165759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459244.1;locus_tag=O5D79_004363;product=YaeQ family protein;protein_id=HJH9165759.1;transl_table=11 DALFDJ020000029.1 tpg gene 54076 54498 . + . ID=gene-O5D79_004364;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=O5D79_004364 DALFDJ020000029.1 Protein Homology CDS 54076 54498 . + 0 ID=cds-HJH9165760.1;Parent=gene-O5D79_004364;Dbxref=NCBI_GP:HJH9165760.1;Name=HJH9165760.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459245.1;locus_tag=O5D79_004364;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=HJH9165760.1;transl_table=11 DALFDJ020000029.1 tpg gene 54530 55231 . + . ID=gene-O5D79_004365;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=O5D79_004365 DALFDJ020000029.1 Protein Homology CDS 54530 55231 . + 0 ID=cds-HJH9165761.1;Parent=gene-O5D79_004365;Dbxref=NCBI_GP:HJH9165761.1;Name=HJH9165761.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006899150.1;locus_tag=O5D79_004365;product=envelope stress response activation lipoprotein NlpE;protein_id=HJH9165761.1;transl_table=11 DALFDJ020000029.1 tpg gene 55305 57023 . - . ID=gene-O5D79_004366;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=O5D79_004366 DALFDJ020000029.1 Protein Homology CDS 55305 57023 . - 0 ID=cds-HJH9165762.1;Parent=gene-O5D79_004366;Dbxref=NCBI_GP:HJH9165762.1;Name=HJH9165762.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=O5D79_004366;product=proline--tRNA ligase;protein_id=HJH9165762.1;transl_table=11 DALFDJ020000029.1 tpg gene 57134 57841 . - . ID=gene-O5D79_004367;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=O5D79_004367 DALFDJ020000029.1 Protein Homology CDS 57134 57841 . - 0 ID=cds-HJH9165763.1;Parent=gene-O5D79_004367;Dbxref=NCBI_GP:HJH9165763.1;Name=HJH9165763.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459247.1;locus_tag=O5D79_004367;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=HJH9165763.1;transl_table=11 DALFDJ020000029.1 tpg gene 57838 58242 . - . ID=gene-O5D79_004368;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=O5D79_004368 DALFDJ020000029.1 Protein Homology CDS 57838 58242 . - 0 ID=cds-HJH9165764.1;Parent=gene-O5D79_004368;Dbxref=NCBI_GP:HJH9165764.1;Name=HJH9165764.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=O5D79_004368;product=Rcs stress response system protein RcsF;protein_id=HJH9165764.1;transl_table=11 DALFDJ020000029.1 tpg gene 58361 59176 . - . ID=gene-O5D79_004369;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=O5D79_004369 DALFDJ020000029.1 Protein Homology CDS 58361 59176 . - 0 ID=cds-HJH9165765.1;Parent=gene-O5D79_004369;Dbxref=NCBI_GP:HJH9165765.1;Name=HJH9165765.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=O5D79_004369;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=HJH9165765.1;transl_table=11 DALFDJ020000029.1 tpg gene 59215 59868 . - . ID=gene-O5D79_004370;Name=O5D79_004370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004370 DALFDJ020000029.1 Protein Homology CDS 59215 59868 . - 0 ID=cds-HJH9165766.1;Parent=gene-O5D79_004370;Dbxref=NCBI_GP:HJH9165766.1;Name=HJH9165766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=O5D79_004370;product=methionine ABC transporter permease MetI;protein_id=HJH9165766.1;transl_table=11 DALFDJ020000029.1 tpg gene 59861 60892 . - . ID=gene-O5D79_004371;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=O5D79_004371 DALFDJ020000029.1 Protein Homology CDS 59861 60892 . - 0 ID=cds-HJH9165767.1;Parent=gene-O5D79_004371;Dbxref=NCBI_GP:HJH9165767.1;Name=HJH9165767.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=O5D79_004371;product=methionine ABC transporter ATP-binding protein MetN;protein_id=HJH9165767.1;transl_table=11 DALFDJ020000029.1 tpg gene 61082 61648 . + . ID=gene-O5D79_004372;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=O5D79_004372 DALFDJ020000029.1 Protein Homology CDS 61082 61648 . + 0 ID=cds-HJH9165768.1;Parent=gene-O5D79_004372;Dbxref=NCBI_GP:HJH9165768.1;Name=HJH9165768.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459252.1;locus_tag=O5D79_004372;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=HJH9165768.1;transl_table=11 ##sequence-region DALFDJ020000030.1 1 56658 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000030.1 tpg region 1 56658 . + . ID=DALFDJ020000030.1:1..56658;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000030.1 tpg gene 130 483 . - . ID=gene-O5D79_004373;Name=O5D79_004373;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004373 DALFDJ020000030.1 Protein Homology CDS 130 483 . - 0 ID=cds-HJH9165769.1;Parent=gene-O5D79_004373;Dbxref=NCBI_GP:HJH9165769.1;Name=HJH9165769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246999.1;locus_tag=O5D79_004373;product=hypothetical protein;protein_id=HJH9165769.1;transl_table=11 DALFDJ020000030.1 tpg gene 476 652 . - . ID=gene-O5D79_004374;Name=O5D79_004374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004374 DALFDJ020000030.1 Protein Homology CDS 476 652 . - 0 ID=cds-HJH9165770.1;Parent=gene-O5D79_004374;Dbxref=NCBI_GP:HJH9165770.1;Name=HJH9165770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120337.1;locus_tag=O5D79_004374;product=host cell division inhibitor Icd-like protein;protein_id=HJH9165770.1;transl_table=11 DALFDJ020000030.1 tpg gene 843 1028 . + . ID=gene-O5D79_004375;Name=O5D79_004375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004375 DALFDJ020000030.1 Protein Homology CDS 843 1028 . + 0 ID=cds-HJH9165771.1;Parent=gene-O5D79_004375;Dbxref=NCBI_GP:HJH9165771.1;Name=HJH9165771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000190568.1;locus_tag=O5D79_004375;product=YlcI/YnfO family protein;protein_id=HJH9165771.1;transl_table=11 DALFDJ020000030.1 tpg gene 1125 1355 . - . ID=gene-O5D79_004376;Name=O5D79_004376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004376 DALFDJ020000030.1 Protein Homology CDS 1125 1355 . - 0 ID=cds-HJH9165772.1;Parent=gene-O5D79_004376;Dbxref=NCBI_GP:HJH9165772.1;Name=HJH9165772.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534484.1;locus_tag=O5D79_004376;product=helix-turn-helix transcriptional regulator;protein_id=HJH9165772.1;transl_table=11 DALFDJ020000030.1 tpg gene 1745 2383 . - . ID=gene-O5D79_004377;Name=O5D79_004377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004377 DALFDJ020000030.1 Protein Homology CDS 1745 2383 . - 0 ID=cds-HJH9165773.1;Parent=gene-O5D79_004377;Dbxref=NCBI_GP:HJH9165773.1;Name=HJH9165773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066529.1;locus_tag=O5D79_004377;product=hypothetical protein;protein_id=HJH9165773.1;transl_table=11 DALFDJ020000030.1 tpg gene 2414 3676 . - . ID=gene-O5D79_004378;Name=O5D79_004378;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004378 DALFDJ020000030.1 Protein Homology CDS 2414 3676 . - 0 ID=cds-HJH9165774.1;Parent=gene-O5D79_004378;Dbxref=NCBI_GP:HJH9165774.1;Name=HJH9165774.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000772652.1;locus_tag=O5D79_004378;product=tyrosine-type recombinase/integrase;protein_id=HJH9165774.1;transl_table=11 DALFDJ020000030.1 tpg gene 3979 4863 . + . ID=gene-O5D79_004379;Name=O5D79_004379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004379 DALFDJ020000030.1 Protein Homology CDS 3979 4863 . + 0 ID=cds-HJH9165775.1;Parent=gene-O5D79_004379;Dbxref=NCBI_GP:HJH9165775.1;Name=HJH9165775.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003830123.1;locus_tag=O5D79_004379;product=ParA family protein;protein_id=HJH9165775.1;transl_table=11 DALFDJ020000030.1 tpg gene 4860 5234 . + . ID=gene-O5D79_004380;Name=O5D79_004380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004380 DALFDJ020000030.1 Protein Homology CDS 4860 5234 . + 0 ID=cds-HJH9165776.1;Parent=gene-O5D79_004380;Dbxref=NCBI_GP:HJH9165776.1;Name=HJH9165776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686497.1;locus_tag=O5D79_004380;product=hypothetical protein;protein_id=HJH9165776.1;transl_table=11 DALFDJ020000030.1 tpg gene 5227 6582 . + . ID=gene-O5D79_004381;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=O5D79_004381 DALFDJ020000030.1 Protein Homology CDS 5227 6582 . + 0 ID=cds-HJH9165777.1;Parent=gene-O5D79_004381;Dbxref=NCBI_GP:HJH9165777.1;Name=HJH9165777.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012907444.1;locus_tag=O5D79_004381;product=replicative DNA helicase;protein_id=HJH9165777.1;transl_table=11 DALFDJ020000030.1 tpg gene 6579 8063 . + . ID=gene-O5D79_004382;Name=O5D79_004382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004382 DALFDJ020000030.1 Protein Homology CDS 6579 8063 . + 0 ID=cds-HJH9165778.1;Parent=gene-O5D79_004382;Dbxref=NCBI_GP:HJH9165778.1;Name=HJH9165778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001060565.1;locus_tag=O5D79_004382;product=ParB family protein;protein_id=HJH9165778.1;transl_table=11 DALFDJ020000030.1 tpg gene 8047 8586 . + . ID=gene-O5D79_004383;Name=O5D79_004383;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004383 DALFDJ020000030.1 Protein Homology CDS 8047 8586 . + 0 ID=cds-HJH9165779.1;Parent=gene-O5D79_004383;Dbxref=NCBI_GP:HJH9165779.1;Name=HJH9165779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863023.1;locus_tag=O5D79_004383;product=DUF2857 domain-containing protein;protein_id=HJH9165779.1;transl_table=11 DALFDJ020000030.1 tpg gene 8605 9738 . + . ID=gene-O5D79_004384;Name=O5D79_004384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004384 DALFDJ020000030.1 Protein Homology CDS 8605 9738 . + 0 ID=cds-HJH9165780.1;Parent=gene-O5D79_004384;Dbxref=NCBI_GP:HJH9165780.1;Name=HJH9165780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015368501.1;locus_tag=O5D79_004384;product=STY4528 family pathogenicity island replication protein;protein_id=HJH9165780.1;transl_table=11 DALFDJ020000030.1 tpg gene 9869 10549 . + . ID=gene-O5D79_004385;Name=O5D79_004385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004385 DALFDJ020000030.1 Protein Homology CDS 9869 10549 . + 0 ID=cds-HJH9165781.1;Parent=gene-O5D79_004385;Dbxref=NCBI_GP:HJH9165781.1;Name=HJH9165781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210596.1;locus_tag=O5D79_004385;product=hypothetical protein;protein_id=HJH9165781.1;transl_table=11 DALFDJ020000030.1 tpg gene 10539 10808 . + . ID=gene-O5D79_004386;Name=O5D79_004386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004386 DALFDJ020000030.1 Protein Homology CDS 10539 10808 . + 0 ID=cds-HJH9165782.1;Parent=gene-O5D79_004386;Dbxref=NCBI_GP:HJH9165782.1;Name=HJH9165782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012210597.1;locus_tag=O5D79_004386;product=hypothetical protein;protein_id=HJH9165782.1;transl_table=11 DALFDJ020000030.1 tpg gene 10874 11029 . - . ID=gene-O5D79_004387;Name=O5D79_004387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004387 DALFDJ020000030.1 GeneMarkS-2+ CDS 10874 11029 . - 0 ID=cds-HJH9165783.1;Parent=gene-O5D79_004387;Dbxref=NCBI_GP:HJH9165783.1;Name=HJH9165783.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004387;product=hypothetical protein;protein_id=HJH9165783.1;transl_table=11 DALFDJ020000030.1 tpg gene 11180 12457 . - . ID=gene-O5D79_004388;Name=O5D79_004388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004388 DALFDJ020000030.1 Protein Homology CDS 11180 12457 . - 0 ID=cds-HJH9165784.1;Parent=gene-O5D79_004388;Dbxref=NCBI_GP:HJH9165784.1;Name=HJH9165784.1;Ontology_term=GO:0016310,GO:0004674,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863019.1;locus_tag=O5D79_004388;product=type II toxin-antitoxin system HipA family toxin;protein_id=HJH9165784.1;transl_table=11 DALFDJ020000030.1 tpg gene 12447 12785 . - . ID=gene-O5D79_004389;Name=O5D79_004389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004389 DALFDJ020000030.1 Protein Homology CDS 12447 12785 . - 0 ID=cds-HJH9165785.1;Parent=gene-O5D79_004389;Dbxref=NCBI_GP:HJH9165785.1;Name=HJH9165785.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863017.1;locus_tag=O5D79_004389;product=helix-turn-helix domain-containing protein;protein_id=HJH9165785.1;transl_table=11 DALFDJ020000030.1 tpg gene 13226 13522 . - . ID=gene-O5D79_004390;Name=O5D79_004390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004390 DALFDJ020000030.1 Protein Homology CDS 13226 13522 . - 0 ID=cds-HJH9165786.1;Parent=gene-O5D79_004390;Dbxref=NCBI_GP:HJH9165786.1;Name=HJH9165786.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001097216.1;locus_tag=O5D79_004390;product=helix-turn-helix transcriptional regulator;protein_id=HJH9165786.1;transl_table=11 DALFDJ020000030.1 tpg gene 13943 16255 . + . ID=gene-O5D79_004391;Name=O5D79_004391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004391 DALFDJ020000030.1 Protein Homology CDS 13943 16255 . + 0 ID=cds-HJH9165787.1;Parent=gene-O5D79_004391;Dbxref=NCBI_GP:HJH9165787.1;Name=HJH9165787.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015368502.1;locus_tag=O5D79_004391;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=HJH9165787.1;transl_table=11 DALFDJ020000030.1 tpg gene 16705 18003 . + . ID=gene-O5D79_004392;Name=O5D79_004392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004392 DALFDJ020000030.1 Protein Homology CDS 16705 18003 . + 0 ID=cds-HJH9165788.1;Parent=gene-O5D79_004392;Dbxref=NCBI_GP:HJH9165788.1;Name=HJH9165788.1;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001121878.1;locus_tag=O5D79_004392;product=Fic family protein;protein_id=HJH9165788.1;transl_table=11 DALFDJ020000030.1 tpg gene 18236 18934 . + . ID=gene-O5D79_004393;Name=O5D79_004393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004393 DALFDJ020000030.1 Protein Homology CDS 18236 18934 . + 0 ID=cds-HJH9165789.1;Parent=gene-O5D79_004393;Dbxref=NCBI_GP:HJH9165789.1;Name=HJH9165789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287071.1;locus_tag=O5D79_004393;product=PFL_4669 family integrating conjugative element protein;protein_id=HJH9165789.1;transl_table=11 DALFDJ020000030.1 tpg gene 18924 19418 . + . ID=gene-O5D79_004394;Name=O5D79_004394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004394 DALFDJ020000030.1 Protein Homology CDS 18924 19418 . + 0 ID=cds-HJH9165790.1;Parent=gene-O5D79_004394;Dbxref=NCBI_GP:HJH9165790.1;Name=HJH9165790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000981778.1;locus_tag=O5D79_004394;product=DUF3158 family protein;protein_id=HJH9165790.1;transl_table=11 DALFDJ020000030.1 tpg gene 19467 19742 . - . ID=gene-O5D79_004395;Name=O5D79_004395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004395 DALFDJ020000030.1 Protein Homology CDS 19467 19742 . - 0 ID=cds-HJH9165791.1;Parent=gene-O5D79_004395;Dbxref=NCBI_GP:HJH9165791.1;Name=HJH9165791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748807.1;locus_tag=O5D79_004395;product=hypothetical protein;protein_id=HJH9165791.1;transl_table=11 DALFDJ020000030.1 tpg gene 19984 20400 . + . ID=gene-O5D79_004396;Name=O5D79_004396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004396 DALFDJ020000030.1 Protein Homology CDS 19984 20400 . + 0 ID=cds-HJH9165792.1;Parent=gene-O5D79_004396;Dbxref=NCBI_GP:HJH9165792.1;Name=HJH9165792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291902.1;locus_tag=O5D79_004396;product=STY4534 family ICE replication protein;protein_id=HJH9165792.1;transl_table=11 DALFDJ020000030.1 tpg gene 20533 20826 . + . ID=gene-O5D79_004397;Name=O5D79_004397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004397 DALFDJ020000030.1 Protein Homology CDS 20533 20826 . + 0 ID=cds-HJH9165793.1;Parent=gene-O5D79_004397;Dbxref=NCBI_GP:HJH9165793.1;Name=HJH9165793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884201.1;locus_tag=O5D79_004397;product=YciI family protein;protein_id=HJH9165793.1;transl_table=11 DALFDJ020000030.1 tpg gene 21061 21525 . + . ID=gene-O5D79_004398;Name=O5D79_004398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004398 DALFDJ020000030.1 Protein Homology CDS 21061 21525 . + 0 ID=cds-HJH9165794.1;Parent=gene-O5D79_004398;Dbxref=NCBI_GP:HJH9165794.1;Name=HJH9165794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101250.1;locus_tag=O5D79_004398;product=response regulator;protein_id=HJH9165794.1;transl_table=11 DALFDJ020000030.1 tpg gene 21518 22126 . + . ID=gene-O5D79_004399;Name=O5D79_004399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004399 DALFDJ020000030.1 Protein Homology CDS 21518 22126 . + 0 ID=cds-HJH9165795.1;Parent=gene-O5D79_004399;Dbxref=NCBI_GP:HJH9165795.1;Name=HJH9165795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003830147.1;locus_tag=O5D79_004399;product=hypothetical protein;protein_id=HJH9165795.1;transl_table=11 DALFDJ020000030.1 tpg gene 22133 22783 . + . ID=gene-O5D79_004400;Name=O5D79_004400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004400 DALFDJ020000030.1 Protein Homology CDS 22133 22783 . + 0 ID=cds-HJH9165796.1;Parent=gene-O5D79_004400;Dbxref=NCBI_GP:HJH9165796.1;Name=HJH9165796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001255483.1;locus_tag=O5D79_004400;product=TIGR03759 family integrating conjugative element protein;protein_id=HJH9165796.1;transl_table=11 DALFDJ020000030.1 tpg gene 22759 23289 . + . ID=gene-O5D79_004401;Name=O5D79_004401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004401 DALFDJ020000030.1 Protein Homology CDS 22759 23289 . + 0 ID=cds-HJH9165797.1;Parent=gene-O5D79_004401;Dbxref=NCBI_GP:HJH9165797.1;Name=HJH9165797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168345.1;locus_tag=O5D79_004401;product=transglycosylase;protein_id=HJH9165797.1;transl_table=11 DALFDJ020000030.1 tpg gene 23286 23693 . + . ID=gene-O5D79_004402;Name=O5D79_004402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004402 DALFDJ020000030.1 Protein Homology CDS 23286 23693 . + 0 ID=cds-HJH9165798.1;Parent=gene-O5D79_004402;Dbxref=NCBI_GP:HJH9165798.1;Name=HJH9165798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000681572.1;locus_tag=O5D79_004402;product=integrating conjugative element protein;protein_id=HJH9165798.1;transl_table=11 DALFDJ020000030.1 tpg gene 23690 25723 . + . ID=gene-O5D79_004403;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=O5D79_004403 DALFDJ020000030.1 Protein Homology CDS 23690 25723 . + 0 ID=cds-HJH9165799.1;Parent=gene-O5D79_004403;Dbxref=NCBI_GP:HJH9165799.1;Name=HJH9165799.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015368505.1;locus_tag=O5D79_004403;product=type IV conjugative transfer system coupling protein TraD;protein_id=HJH9165799.1;transl_table=11 DALFDJ020000030.1 tpg gene 25686 25952 . + . ID=gene-O5D79_004404;Name=O5D79_004404;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004404 DALFDJ020000030.1 Protein Homology CDS 25686 25952 . + 0 ID=cds-HJH9165800.1;Parent=gene-O5D79_004404;Dbxref=NCBI_GP:HJH9165800.1;Name=HJH9165800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005289972.1;locus_tag=O5D79_004404;product=hypothetical protein;protein_id=HJH9165800.1;transl_table=11 DALFDJ020000030.1 tpg gene 25952 26632 . + . ID=gene-O5D79_004405;Name=O5D79_004405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004405 DALFDJ020000030.1 Protein Homology CDS 25952 26632 . + 0 ID=cds-HJH9165801.1;Parent=gene-O5D79_004405;Dbxref=NCBI_GP:HJH9165801.1;Name=HJH9165801.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003830158.1;locus_tag=O5D79_004405;product=TIGR03747 family integrating conjugative element membrane protein;protein_id=HJH9165801.1;transl_table=11 DALFDJ020000030.1 tpg gene 26763 27536 . + . ID=gene-O5D79_004406;Name=O5D79_004406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004406 DALFDJ020000030.1 Protein Homology CDS 26763 27536 . + 0 ID=cds-HJH9165802.1;Parent=gene-O5D79_004406;Dbxref=NCBI_GP:HJH9165802.1;Name=HJH9165802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001695295.1;locus_tag=O5D79_004406;product=type IV toxin-antitoxin system AbiEi family antitoxin;protein_id=HJH9165802.1;transl_table=11 DALFDJ020000030.1 tpg gene 27529 28446 . + . ID=gene-O5D79_004407;Name=O5D79_004407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004407 DALFDJ020000030.1 Protein Homology CDS 27529 28446 . + 0 ID=cds-HJH9165803.1;Parent=gene-O5D79_004407;Dbxref=NCBI_GP:HJH9165803.1;Name=HJH9165803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224627.1;locus_tag=O5D79_004407;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=HJH9165803.1;transl_table=11 DALFDJ020000030.1 tpg gene 28521 28793 . + . ID=gene-O5D79_004408;Name=O5D79_004408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004408 DALFDJ020000030.1 Protein Homology CDS 28521 28793 . + 0 ID=cds-HJH9165804.1;Parent=gene-O5D79_004408;Dbxref=NCBI_GP:HJH9165804.1;Name=HJH9165804.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025706.6;locus_tag=O5D79_004408;product=DUF4400 domain-containing protein;protein_id=HJH9165804.1;transl_table=11 DALFDJ020000030.1 tpg gene 28810 29235 . + . ID=gene-O5D79_004409;Name=O5D79_004409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004409 DALFDJ020000030.1 GeneMarkS-2+ CDS 28810 29235 . + 0 ID=cds-HJH9165805.1;Parent=gene-O5D79_004409;Dbxref=NCBI_GP:HJH9165805.1;Name=HJH9165805.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004409;product=hypothetical protein;protein_id=HJH9165805.1;transl_table=11 DALFDJ020000030.1 tpg gene 29380 30345 . + . ID=gene-O5D79_004410;Name=O5D79_004410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004410 DALFDJ020000030.1 Protein Homology CDS 29380 30345 . + 0 ID=cds-HJH9165806.1;Parent=gene-O5D79_004410;Dbxref=NCBI_GP:HJH9165806.1;Name=HJH9165806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242506.1;locus_tag=O5D79_004410;product=SIR2 family protein;protein_id=HJH9165806.1;transl_table=11 DALFDJ020000030.1 tpg gene 30425 30739 . + . ID=gene-O5D79_004411;Name=O5D79_004411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004411 DALFDJ020000030.1 Protein Homology CDS 30425 30739 . + 0 ID=cds-HJH9165807.1;Parent=gene-O5D79_004411;Dbxref=NCBI_GP:HJH9165807.1;Name=HJH9165807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000873300.1;locus_tag=O5D79_004411;product=RAQPRD family integrative conjugative element protein;protein_id=HJH9165807.1;transl_table=11 DALFDJ020000030.1 tpg gene 30736 30969 . + . ID=gene-O5D79_004412;Name=O5D79_004412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004412 DALFDJ020000030.1 Protein Homology CDS 30736 30969 . + 0 ID=cds-HJH9165808.1;Parent=gene-O5D79_004412;Dbxref=NCBI_GP:HJH9165808.1;Name=HJH9165808.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686466.1;locus_tag=O5D79_004412;product=TIGR03758 family integrating conjugative element protein;protein_id=HJH9165808.1;transl_table=11 DALFDJ020000030.1 tpg gene 30988 31314 . + . ID=gene-O5D79_004413;Name=O5D79_004413;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004413 DALFDJ020000030.1 Protein Homology CDS 30988 31314 . + 0 ID=cds-HJH9165809.1;Parent=gene-O5D79_004413;Dbxref=NCBI_GP:HJH9165809.1;Name=HJH9165809.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716176.1;locus_tag=O5D79_004413;product=TIGR03745 family integrating conjugative element membrane protein;protein_id=HJH9165809.1;transl_table=11 DALFDJ020000030.1 tpg gene 31318 31671 . + . ID=gene-O5D79_004414;Name=O5D79_004414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004414 DALFDJ020000030.1 Protein Homology CDS 31318 31671 . + 0 ID=cds-HJH9165810.1;Parent=gene-O5D79_004414;Dbxref=NCBI_GP:HJH9165810.1;Name=HJH9165810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000104332.1;locus_tag=O5D79_004414;product=TIGR03750 family conjugal transfer protein;protein_id=HJH9165810.1;transl_table=11 DALFDJ020000030.1 tpg gene 31668 32294 . + . ID=gene-O5D79_004415;Name=O5D79_004415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004415 DALFDJ020000030.1 Protein Homology CDS 31668 32294 . + 0 ID=cds-HJH9165811.1;Parent=gene-O5D79_004415;Dbxref=NCBI_GP:HJH9165811.1;Name=HJH9165811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686463.1;locus_tag=O5D79_004415;product=PFL_4703 family integrating conjugative element protein;protein_id=HJH9165811.1;transl_table=11 DALFDJ020000030.1 tpg gene 32291 33079 . + . ID=gene-O5D79_004416;Name=O5D79_004416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004416 DALFDJ020000030.1 Protein Homology CDS 32291 33079 . + 0 ID=cds-HJH9165812.1;Parent=gene-O5D79_004416;Dbxref=NCBI_GP:HJH9165812.1;Name=HJH9165812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862970.1;locus_tag=O5D79_004416;product=TIGR03749 family integrating conjugative element protein;protein_id=HJH9165812.1;transl_table=11 DALFDJ020000030.1 tpg gene 33076 34413 . + . ID=gene-O5D79_004417;Name=O5D79_004417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004417 DALFDJ020000030.1 Protein Homology CDS 33076 34413 . + 0 ID=cds-HJH9165813.1;Parent=gene-O5D79_004417;Dbxref=NCBI_GP:HJH9165813.1;Name=HJH9165813.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686461.1;locus_tag=O5D79_004417;product=TIGR03752 family integrating conjugative element protein;protein_id=HJH9165813.1;transl_table=11 DALFDJ020000030.1 tpg gene 34413 34802 . + . ID=gene-O5D79_004418;Name=O5D79_004418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004418 DALFDJ020000030.1 Protein Homology CDS 34413 34802 . + 0 ID=cds-HJH9165814.1;Parent=gene-O5D79_004418;Dbxref=NCBI_GP:HJH9165814.1;Name=HJH9165814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001221377.1;locus_tag=O5D79_004418;product=TIGR03751 family conjugal transfer lipoprotein;protein_id=HJH9165814.1;transl_table=11 DALFDJ020000030.1 tpg gene 34802 37453 . + . ID=gene-O5D79_004419;Name=O5D79_004419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004419 DALFDJ020000030.1 Protein Homology CDS 34802 37453 . + 0 ID=cds-HJH9165815.1;Parent=gene-O5D79_004419;Dbxref=NCBI_GP:HJH9165815.1;Name=HJH9165815.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750567.1;locus_tag=O5D79_004419;product=conjugative transfer ATPase;protein_id=HJH9165815.1;transl_table=11 DALFDJ020000030.1 tpg gene 37830 38723 . - . ID=gene-O5D79_004420;Name=O5D79_004420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004420 DALFDJ020000030.1 GeneMarkS-2+ CDS 37830 38723 . - 0 ID=cds-HJH9165816.1;Parent=gene-O5D79_004420;Dbxref=NCBI_GP:HJH9165816.1;Name=HJH9165816.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004420;product=hypothetical protein;protein_id=HJH9165816.1;transl_table=11 DALFDJ020000030.1 tpg gene 38888 40240 . - . ID=gene-O5D79_004421;Name=O5D79_004421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004421 DALFDJ020000030.1 Protein Homology CDS 38888 40240 . - 0 ID=cds-HJH9165817.1;Parent=gene-O5D79_004421;Dbxref=NCBI_GP:HJH9165817.1;Name=HJH9165817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750564.1;locus_tag=O5D79_004421;product=hypothetical protein;protein_id=HJH9165817.1;transl_table=11 DALFDJ020000030.1 tpg gene 40359 40685 . - . ID=gene-O5D79_004422;Name=O5D79_004422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004422 DALFDJ020000030.1 Protein Homology CDS 40359 40685 . - 0 ID=cds-HJH9165818.1;Parent=gene-O5D79_004422;Dbxref=NCBI_GP:HJH9165818.1;Name=HJH9165818.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686826.1;locus_tag=O5D79_004422;product=helix-turn-helix domain-containing protein;protein_id=HJH9165818.1;transl_table=11 DALFDJ020000030.1 tpg gene 40761 41105 . - . ID=gene-O5D79_004423;Name=O5D79_004423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004423 DALFDJ020000030.1 Protein Homology CDS 40761 41105 . - 0 ID=cds-HJH9165819.1;Parent=gene-O5D79_004423;Dbxref=NCBI_GP:HJH9165819.1;Name=HJH9165819.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001172095.1;locus_tag=O5D79_004423;product=helix-turn-helix domain-containing protein;protein_id=HJH9165819.1;transl_table=11 DALFDJ020000030.1 tpg gene 41183 41443 . + . ID=gene-O5D79_004424;Name=O5D79_004424;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004424 DALFDJ020000030.1 Protein Homology CDS 41183 41443 . + 0 ID=cds-HJH9165820.1;Parent=gene-O5D79_004424;Dbxref=NCBI_GP:HJH9165820.1;Name=HJH9165820.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000165918.1;locus_tag=O5D79_004424;product=helix-turn-helix domain-containing protein;protein_id=HJH9165820.1;transl_table=11 DALFDJ020000030.1 tpg gene 41440 42165 . + . ID=gene-O5D79_004425;Name=O5D79_004425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004425 DALFDJ020000030.1 Protein Homology CDS 41440 42165 . + 0 ID=cds-HJH9165821.1;Parent=gene-O5D79_004425;Dbxref=NCBI_GP:HJH9165821.1;Name=HJH9165821.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000632378.1;locus_tag=O5D79_004425;product=Crp/Fnr family transcriptional regulator;protein_id=HJH9165821.1;transl_table=11 DALFDJ020000030.1 tpg gene 42132 43313 . - . ID=gene-O5D79_004426;Name=O5D79_004426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004426 DALFDJ020000030.1 Protein Homology CDS 42132 43313 . - 0 ID=cds-HJH9165822.1;Parent=gene-O5D79_004426;Dbxref=NCBI_GP:HJH9165822.1;Name=HJH9165822.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156760.1;locus_tag=O5D79_004426;product=anaerobic sulfatase maturase;protein_id=HJH9165822.1;transl_table=11 DALFDJ020000030.1 tpg gene 43310 44110 . - . ID=gene-O5D79_004427;Name=O5D79_004427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004427 DALFDJ020000030.1 Protein Homology CDS 43310 44110 . - 0 ID=cds-HJH9165823.1;Parent=gene-O5D79_004427;Dbxref=NCBI_GP:HJH9165823.1;Name=HJH9165823.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000127870.1;locus_tag=O5D79_004427;product=sulfite exporter TauE/SafE family protein;protein_id=HJH9165823.1;transl_table=11 DALFDJ020000030.1 tpg gene 44114 45406 . - . ID=gene-O5D79_004428;Name=O5D79_004428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004428 DALFDJ020000030.1 Protein Homology CDS 44114 45406 . - 0 ID=cds-HJH9165824.1;Parent=gene-O5D79_004428;Dbxref=NCBI_GP:HJH9165824.1;Name=HJH9165824.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750558.1;locus_tag=O5D79_004428;product=sulfatase-like hydrolase/transferase;protein_id=HJH9165824.1;transl_table=11 DALFDJ020000030.1 tpg gene 45420 46664 . - . ID=gene-O5D79_004429;Name=O5D79_004429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004429 DALFDJ020000030.1 Protein Homology CDS 45420 46664 . - 0 ID=cds-HJH9165825.1;Parent=gene-O5D79_004429;Dbxref=NCBI_GP:HJH9165825.1;Name=HJH9165825.1;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001007556.1;locus_tag=O5D79_004429;product=oligosaccharide MFS transporter;protein_id=HJH9165825.1;transl_table=11 DALFDJ020000030.1 tpg gene 46939 50088 . + . ID=gene-O5D79_004430;Name=O5D79_004430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004430 DALFDJ020000030.1 Protein Homology CDS 46939 50088 . + 0 ID=cds-HJH9165826.1;Parent=gene-O5D79_004430;Dbxref=NCBI_GP:HJH9165826.1;Name=HJH9165826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001607975.1;locus_tag=O5D79_004430;product=alpha-N-acetylglucosaminidase TIM-barrel domain-containing protein;protein_id=HJH9165826.1;transl_table=11 DALFDJ020000030.1 tpg gene 50153 51160 . + . ID=gene-O5D79_004431;Name=O5D79_004431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004431 DALFDJ020000030.1 Protein Homology CDS 50153 51160 . + 0 ID=cds-HJH9165827.1;Parent=gene-O5D79_004431;Dbxref=NCBI_GP:HJH9165827.1;Name=HJH9165827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003830207.1;locus_tag=O5D79_004431;product=OmpG family monomeric porin;protein_id=HJH9165827.1;transl_table=11 DALFDJ020000030.1 tpg gene 51176 52552 . + . ID=gene-O5D79_004432;Name=O5D79_004432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004432 DALFDJ020000030.1 Protein Homology CDS 51176 52552 . + 0 ID=cds-HJH9165828.1;Parent=gene-O5D79_004432;Dbxref=NCBI_GP:HJH9165828.1;Name=HJH9165828.1;Ontology_term=GO:0005975,GO:0004553,GO:0030246;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000106731.1;locus_tag=O5D79_004432;product=glycoside hydrolase family 16 protein;protein_id=HJH9165828.1;transl_table=11 DALFDJ020000030.1 tpg gene 52671 53606 . + . ID=gene-O5D79_004433;Name=O5D79_004433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004433 DALFDJ020000030.1 Protein Homology CDS 52671 53606 . + 0 ID=cds-HJH9165829.1;Parent=gene-O5D79_004433;Dbxref=NCBI_GP:HJH9165829.1;Name=HJH9165829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001607974.1;locus_tag=O5D79_004433;product=TIGR03756 family integrating conjugative element protein;protein_id=HJH9165829.1;transl_table=11 DALFDJ020000030.1 tpg gene 53609 54976 . + . ID=gene-O5D79_004434;Name=O5D79_004434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004434 DALFDJ020000030.1 Protein Homology CDS 53609 54976 . + 0 ID=cds-HJH9165830.1;Parent=gene-O5D79_004434;Dbxref=NCBI_GP:HJH9165830.1;Name=HJH9165830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686442.1;locus_tag=O5D79_004434;product=integrating conjugative element protein;protein_id=HJH9165830.1;transl_table=11 DALFDJ020000030.1 tpg gene 54973 55230 . + . ID=gene-O5D79_004435;Name=O5D79_004435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004435 DALFDJ020000030.1 Protein Homology CDS 54973 55230 . + 0 ID=cds-HJH9165831.1;Parent=gene-O5D79_004435;Dbxref=NCBI_GP:HJH9165831.1;Name=HJH9165831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686441.1;locus_tag=O5D79_004435;product=hypothetical protein;protein_id=HJH9165831.1;transl_table=11 DALFDJ020000030.1 tpg gene 55227 56658 . + . ID=gene-O5D79_004436;Name=O5D79_004436;end_range=56658,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004436;partial=true DALFDJ020000030.1 Protein Homology CDS 55227 56658 . + 0 ID=cds-HJH9165832.1;Parent=gene-O5D79_004436;Dbxref=NCBI_GP:HJH9165832.1;Name=HJH9165832.1;end_range=56658,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210717.1;locus_tag=O5D79_004436;partial=true;product=conjugal transfer protein TraG N-terminal domain-containing protein;protein_id=HJH9165832.1;transl_table=11 ##sequence-region DALFDJ020000031.1 1 52780 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000031.1 tpg region 1 52780 . + . ID=DALFDJ020000031.1:1..52780;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000031.1 tpg gene 57 341 . - . ID=gene-O5D79_004437;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=O5D79_004437 DALFDJ020000031.1 Protein Homology CDS 57 341 . - 0 ID=cds-HJH9165833.1;Parent=gene-O5D79_004437;Dbxref=NCBI_GP:HJH9165833.1;Name=HJH9165833.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=O5D79_004437;product=integration host factor subunit beta;protein_id=HJH9165833.1;transl_table=11 DALFDJ020000031.1 tpg gene 497 2170 . - . ID=gene-O5D79_004438;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=O5D79_004438 DALFDJ020000031.1 Protein Homology CDS 497 2170 . - 0 ID=cds-HJH9165834.1;Parent=gene-O5D79_004438;Dbxref=NCBI_GP:HJH9165834.1;Name=HJH9165834.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=O5D79_004438;product=30S ribosomal protein S1;protein_id=HJH9165834.1;transl_table=11 DALFDJ020000031.1 tpg gene 2284 2967 . - . ID=gene-O5D79_004439;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=O5D79_004439 DALFDJ020000031.1 Protein Homology CDS 2284 2967 . - 0 ID=cds-HJH9165835.1;Parent=gene-O5D79_004439;Dbxref=NCBI_GP:HJH9165835.1;Name=HJH9165835.1;Ontology_term=GO:0015949,GO:0004127,GO:0005524;gbkey=CDS;gene=cmk;go_function=(d)CMP kinase activity|0004127||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=O5D79_004439;product=(d)CMP kinase;protein_id=HJH9165835.1;transl_table=11 DALFDJ020000031.1 tpg gene 3140 3901 . - . ID=gene-O5D79_004440;Name=O5D79_004440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004440 DALFDJ020000031.1 Protein Homology CDS 3140 3901 . - 0 ID=cds-HJH9165836.1;Parent=gene-O5D79_004440;Dbxref=NCBI_GP:HJH9165836.1;Name=HJH9165836.1;Ontology_term=GO:0004222,GO:0008237,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459954.1;locus_tag=O5D79_004440;product=M48 family metallopeptidase;protein_id=HJH9165836.1;transl_table=11 DALFDJ020000031.1 tpg gene 4044 5327 . - . ID=gene-O5D79_004441;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=O5D79_004441 DALFDJ020000031.1 Protein Homology CDS 4044 5327 . - 0 ID=cds-HJH9165837.1;Parent=gene-O5D79_004441;Dbxref=NCBI_GP:HJH9165837.1;Name=HJH9165837.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459953.1;locus_tag=O5D79_004441;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=HJH9165837.1;transl_table=11 DALFDJ020000031.1 tpg gene 5397 6485 . - . ID=gene-O5D79_004442;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=O5D79_004442 DALFDJ020000031.1 Protein Homology CDS 5397 6485 . - 0 ID=cds-HJH9165838.1;Parent=gene-O5D79_004442;Dbxref=NCBI_GP:HJH9165838.1;Name=HJH9165838.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459952.1;locus_tag=O5D79_004442;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=HJH9165838.1;transl_table=11 DALFDJ020000031.1 tpg gene 6671 7363 . - . ID=gene-O5D79_004443;Name=O5D79_004443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004443 DALFDJ020000031.1 Protein Homology CDS 6671 7363 . - 0 ID=cds-HJH9165839.1;Parent=gene-O5D79_004443;Dbxref=NCBI_GP:HJH9165839.1;Name=HJH9165839.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459951.1;locus_tag=O5D79_004443;product=DUF421 domain-containing protein;protein_id=HJH9165839.1;transl_table=11 DALFDJ020000031.1 tpg gene 7500 9260 . + . ID=gene-O5D79_004444;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=O5D79_004444 DALFDJ020000031.1 Protein Homology CDS 7500 9260 . + 0 ID=cds-HJH9165840.1;Parent=gene-O5D79_004444;Dbxref=NCBI_GP:HJH9165840.1;Name=HJH9165840.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459950.1;locus_tag=O5D79_004444;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=HJH9165840.1;transl_table=11 DALFDJ020000031.1 tpg gene 9665 10522 . + . ID=gene-O5D79_004445;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=O5D79_004445 DALFDJ020000031.1 Protein Homology CDS 9665 10522 . + 0 ID=cds-HJH9165841.1;Parent=gene-O5D79_004445;Dbxref=NCBI_GP:HJH9165841.1;Name=HJH9165841.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459949.1;locus_tag=O5D79_004445;product=formate transporter FocA;protein_id=HJH9165841.1;transl_table=11 DALFDJ020000031.1 tpg gene 10582 12864 . + . ID=gene-O5D79_004446;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=O5D79_004446 DALFDJ020000031.1 Protein Homology CDS 10582 12864 . + 0 ID=cds-HJH9165842.1;Parent=gene-O5D79_004446;Dbxref=NCBI_GP:HJH9165842.1;Name=HJH9165842.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=O5D79_004446;product=formate C-acetyltransferase;protein_id=HJH9165842.1;transl_table=11 DALFDJ020000031.1 tpg gene 12936 13895 . - . ID=gene-O5D79_004447;Name=sopD2;gbkey=Gene;gene=sopD2;gene_biotype=protein_coding;locus_tag=O5D79_004447 DALFDJ020000031.1 Protein Homology CDS 12936 13895 . - 0 ID=cds-HJH9165843.1;Parent=gene-O5D79_004447;Dbxref=NCBI_GP:HJH9165843.1;Name=HJH9165843.1;gbkey=CDS;gene=sopD2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459947.1;locus_tag=O5D79_004447;product=type III secretion system effector SopD2;protein_id=HJH9165843.1;transl_table=11 DALFDJ020000031.1 tpg pseudogene 14083 14363 . + . ID=gene-O5D79_004448;Name=O5D79_004448;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004448;pseudo=true DALFDJ020000031.1 Protein Homology CDS 14083 14363 . + 0 ID=cds-O5D79_004448;Parent=gene-O5D79_004448;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459946.1;locus_tag=O5D79_004448;product=cytoplasmic protein;pseudo=true;transl_table=11 DALFDJ020000031.1 tpg gene 14482 15279 . + . ID=gene-O5D79_004449;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=O5D79_004449 DALFDJ020000031.1 Protein Homology CDS 14482 15279 . + 0 ID=cds-HJH9165844.1;Parent=gene-O5D79_004449;Dbxref=NCBI_GP:HJH9165844.1;Name=HJH9165844.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696619.1;locus_tag=O5D79_004449;product=pyruvate formate lyase 1-activating protein;protein_id=HJH9165844.1;transl_table=11 DALFDJ020000031.1 tpg gene 15571 16992 . - . ID=gene-O5D79_004450;Name=O5D79_004450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004450 DALFDJ020000031.1 Protein Homology CDS 15571 16992 . - 0 ID=cds-HJH9165845.1;Parent=gene-O5D79_004450;Dbxref=NCBI_GP:HJH9165845.1;Name=HJH9165845.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459944.1;locus_tag=O5D79_004450;product=APC family permease;protein_id=HJH9165845.1;transl_table=11 DALFDJ020000031.1 tpg gene 17210 18358 . - . ID=gene-O5D79_004451;Name=O5D79_004451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004451 DALFDJ020000031.1 Protein Homology CDS 17210 18358 . - 0 ID=cds-HJH9165846.1;Parent=gene-O5D79_004451;Dbxref=NCBI_GP:HJH9165846.1;Name=HJH9165846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459943.1;locus_tag=O5D79_004451;product=MFS transporter;protein_id=HJH9165846.1;transl_table=11 DALFDJ020000031.1 tpg gene 18708 19571 . - . ID=gene-O5D79_004452;Name=O5D79_004452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004452 DALFDJ020000031.1 Protein Homology CDS 18708 19571 . - 0 ID=cds-HJH9165847.1;Parent=gene-O5D79_004452;Dbxref=NCBI_GP:HJH9165847.1;Name=HJH9165847.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459942.1;locus_tag=O5D79_004452;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=HJH9165847.1;transl_table=11 DALFDJ020000031.1 tpg gene 19573 20190 . - . ID=gene-O5D79_004453;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=O5D79_004453 DALFDJ020000031.1 Protein Homology CDS 19573 20190 . - 0 ID=cds-HJH9165848.1;Parent=gene-O5D79_004453;Dbxref=NCBI_GP:HJH9165848.1;Name=HJH9165848.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=O5D79_004453;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=HJH9165848.1;transl_table=11 DALFDJ020000031.1 tpg gene 20201 22645 . - . ID=gene-O5D79_004454;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=O5D79_004454 DALFDJ020000031.1 Protein Homology CDS 20201 22645 . - 0 ID=cds-HJH9165849.1;Parent=gene-O5D79_004454;Dbxref=NCBI_GP:HJH9165849.1;Name=HJH9165849.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=O5D79_004454;product=dimethylsulfoxide reductase subunit A;protein_id=HJH9165849.1;transl_table=11 DALFDJ020000031.1 tpg gene 22881 24173 . - . ID=gene-O5D79_004455;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=O5D79_004455 DALFDJ020000031.1 Protein Homology CDS 22881 24173 . - 0 ID=cds-HJH9165850.1;Parent=gene-O5D79_004455;Dbxref=NCBI_GP:HJH9165850.1;Name=HJH9165850.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=O5D79_004455;product=serine--tRNA ligase;protein_id=HJH9165850.1;transl_table=11 DALFDJ020000031.1 tpg gene 24432 25775 . - . ID=gene-O5D79_004456;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=O5D79_004456 DALFDJ020000031.1 Protein Homology CDS 24432 25775 . - 0 ID=cds-HJH9165851.1;Parent=gene-O5D79_004456;Dbxref=NCBI_GP:HJH9165851.1;Name=HJH9165851.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459938.1;locus_tag=O5D79_004456;product=replication-associated recombination protein RarA;protein_id=HJH9165851.1;transl_table=11 DALFDJ020000031.1 tpg gene 25785 26396 . - . ID=gene-O5D79_004457;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=O5D79_004457 DALFDJ020000031.1 Protein Homology CDS 25785 26396 . - 0 ID=cds-HJH9165852.1;Parent=gene-O5D79_004457;Dbxref=NCBI_GP:HJH9165852.1;Name=HJH9165852.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=O5D79_004457;product=outer membrane lipoprotein chaperone LolA;protein_id=HJH9165852.1;transl_table=11 DALFDJ020000031.1 tpg gene 26539 30651 . - . ID=gene-O5D79_004458;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=O5D79_004458 DALFDJ020000031.1 Protein Homology CDS 26539 30651 . - 0 ID=cds-HJH9165853.1;Parent=gene-O5D79_004458;Dbxref=NCBI_GP:HJH9165853.1;Name=HJH9165853.1;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459936.1;locus_tag=O5D79_004458;product=DNA translocase FtsK;protein_id=HJH9165853.1;transl_table=11 DALFDJ020000031.1 tpg gene 30786 31280 . - . ID=gene-O5D79_004459;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=O5D79_004459 DALFDJ020000031.1 Protein Homology CDS 30786 31280 . - 0 ID=cds-HJH9165854.1;Parent=gene-O5D79_004459;Dbxref=NCBI_GP:HJH9165854.1;Name=HJH9165854.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=O5D79_004459;product=leucine-responsive transcriptional regulator Lrp;protein_id=HJH9165854.1;transl_table=11 DALFDJ020000031.1 tpg gene 31827 32795 . + . ID=gene-O5D79_004460;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=O5D79_004460 DALFDJ020000031.1 Protein Homology CDS 31827 32795 . + 0 ID=cds-HJH9165855.1;Parent=gene-O5D79_004460;Dbxref=NCBI_GP:HJH9165855.1;Name=HJH9165855.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459934.1;locus_tag=O5D79_004460;product=thioredoxin-disulfide reductase;protein_id=HJH9165855.1;transl_table=11 DALFDJ020000031.1 tpg gene 32909 34675 . + . ID=gene-O5D79_004461;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=O5D79_004461 DALFDJ020000031.1 Protein Homology CDS 32909 34675 . + 0 ID=cds-HJH9165856.1;Parent=gene-O5D79_004461;Dbxref=NCBI_GP:HJH9165856.1;Name=HJH9165856.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=O5D79_004461;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=HJH9165856.1;transl_table=11 DALFDJ020000031.1 tpg gene 34676 36397 . + . ID=gene-O5D79_004462;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=O5D79_004462 DALFDJ020000031.1 Protein Homology CDS 34676 36397 . + 0 ID=cds-HJH9165857.1;Parent=gene-O5D79_004462;Dbxref=NCBI_GP:HJH9165857.1;Name=HJH9165857.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=O5D79_004462;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=HJH9165857.1;transl_table=11 DALFDJ020000031.1 tpg gene 36442 37146 . + . ID=gene-O5D79_004463;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=O5D79_004463 DALFDJ020000031.1 Protein Homology CDS 36442 37146 . + 0 ID=cds-HJH9165858.1;Parent=gene-O5D79_004463;Dbxref=NCBI_GP:HJH9165858.1;Name=HJH9165858.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459931.1;locus_tag=O5D79_004463;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=HJH9165858.1;transl_table=11 DALFDJ020000031.1 tpg gene 37458 37676 . + . ID=gene-O5D79_004464;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=O5D79_004464 DALFDJ020000031.1 Protein Homology CDS 37458 37676 . + 0 ID=cds-HJH9165859.1;Parent=gene-O5D79_004464;Dbxref=NCBI_GP:HJH9165859.1;Name=HJH9165859.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=O5D79_004464;product=translation initiation factor IF-1;protein_id=HJH9165859.1;transl_table=11 DALFDJ020000031.1 tpg gene 37767 38678 . - . ID=gene-O5D79_004465;Name=O5D79_004465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004465 DALFDJ020000031.1 Protein Homology CDS 37767 38678 . - 0 ID=cds-HJH9165860.1;Parent=gene-O5D79_004465;Dbxref=NCBI_GP:HJH9165860.1;Name=HJH9165860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459928.1;locus_tag=O5D79_004465;product=LysR family transcriptional regulator;protein_id=HJH9165860.1;transl_table=11 DALFDJ020000031.1 tpg gene 38787 39647 . + . ID=gene-O5D79_004466;Name=O5D79_004466;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004466 DALFDJ020000031.1 Protein Homology CDS 38787 39647 . + 0 ID=cds-HJH9165861.1;Parent=gene-O5D79_004466;Dbxref=NCBI_GP:HJH9165861.1;Name=HJH9165861.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=O5D79_004466;product=pirin family protein;protein_id=HJH9165861.1;transl_table=11 DALFDJ020000031.1 tpg gene 39667 40344 . + . ID=gene-O5D79_004467;Name=O5D79_004467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004467 DALFDJ020000031.1 Protein Homology CDS 39667 40344 . + 0 ID=cds-HJH9165862.1;Parent=gene-O5D79_004467;Dbxref=NCBI_GP:HJH9165862.1;Name=HJH9165862.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459926.1;locus_tag=O5D79_004467;product=hydrolase;protein_id=HJH9165862.1;transl_table=11 DALFDJ020000031.1 tpg gene 40493 40580 . + . ID=gene-O5D79_004468;Name=O5D79_004468;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_004468 DALFDJ020000031.1 tRNAscan-SE tRNA 40493 40580 . + . ID=rna-O5D79_004468;Parent=gene-O5D79_004468;anticodon=(pos:40527..40529);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004468;product=tRNA-Ser DALFDJ020000031.1 tRNAscan-SE exon 40493 40580 . + . ID=exon-O5D79_004468-1;Parent=rna-O5D79_004468;anticodon=(pos:40527..40529);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004468;product=tRNA-Ser DALFDJ020000031.1 tpg gene 40972 42429 . - . ID=gene-O5D79_004469;Name=O5D79_004469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004469 DALFDJ020000031.1 Protein Homology CDS 40972 42429 . - 0 ID=cds-HJH9165863.1;Parent=gene-O5D79_004469;Dbxref=NCBI_GP:HJH9165863.1;Name=HJH9165863.1;Ontology_term=GO:0003676,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017346485.1;locus_tag=O5D79_004469;product=argonaute/piwi family protein;protein_id=HJH9165863.1;transl_table=11 DALFDJ020000031.1 tpg gene 42426 43649 . - . ID=gene-O5D79_004470;Name=O5D79_004470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004470 DALFDJ020000031.1 GeneMarkS-2+ CDS 42426 43649 . - 0 ID=cds-HJH9165864.1;Parent=gene-O5D79_004470;Dbxref=NCBI_GP:HJH9165864.1;Name=HJH9165864.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004470;product=hypothetical protein;protein_id=HJH9165864.1;transl_table=11 DALFDJ020000031.1 tpg gene 43671 44288 . - . ID=gene-O5D79_004471;Name=O5D79_004471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004471 DALFDJ020000031.1 Protein Homology CDS 43671 44288 . - 0 ID=cds-HJH9165865.1;Parent=gene-O5D79_004471;Dbxref=NCBI_GP:HJH9165865.1;Name=HJH9165865.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024685.6;locus_tag=O5D79_004471;product=SIR2 family protein;protein_id=HJH9165865.1;transl_table=11 DALFDJ020000031.1 tpg gene 44849 46108 . + . ID=gene-O5D79_004472;Name=O5D79_004472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004472 DALFDJ020000031.1 Protein Homology CDS 44849 46108 . + 0 ID=cds-HJH9165866.1;Parent=gene-O5D79_004472;Dbxref=NCBI_GP:HJH9165866.1;Name=HJH9165866.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001219011.1;locus_tag=O5D79_004472;product=tyrosine-type recombinase/integrase;protein_id=HJH9165866.1;transl_table=11 DALFDJ020000031.1 tpg gene 46580 47491 . + . ID=gene-O5D79_004473;Name=O5D79_004473;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004473 DALFDJ020000031.1 Protein Homology CDS 46580 47491 . + 0 ID=cds-HJH9165867.1;Parent=gene-O5D79_004473;Dbxref=NCBI_GP:HJH9165867.1;Name=HJH9165867.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015700.6;locus_tag=O5D79_004473;product=AfsA-related hotdog domain-containing protein;protein_id=HJH9165867.1;transl_table=11 DALFDJ020000031.1 tpg gene 47479 47694 . + . ID=gene-O5D79_004474;Name=O5D79_004474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004474 DALFDJ020000031.1 Protein Homology CDS 47479 47694 . + 0 ID=cds-HJH9165868.1;Parent=gene-O5D79_004474;Dbxref=NCBI_GP:HJH9165868.1;Name=HJH9165868.1;Ontology_term=GO:0006633,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: protein motif:HMM:NF049449.1;locus_tag=O5D79_004474;product=acyl carrier protein;protein_id=HJH9165868.1;transl_table=11 DALFDJ020000031.1 tpg gene 47724 48941 . + . ID=gene-O5D79_004475;Name=O5D79_004475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004475 DALFDJ020000031.1 Protein Homology CDS 47724 48941 . + 0 ID=cds-HJH9165869.1;Parent=gene-O5D79_004475;Dbxref=NCBI_GP:HJH9165869.1;Name=HJH9165869.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: protein motif:HMM:NF005589.0;locus_tag=O5D79_004475;product=beta-ketoacyl-[acyl-carrier-protein] synthase family protein;protein_id=HJH9165869.1;transl_table=11 DALFDJ020000031.1 tpg gene 48954 49649 . + . ID=gene-O5D79_004476;Name=O5D79_004476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004476 DALFDJ020000031.1 GeneMarkS-2+ CDS 48954 49649 . + 0 ID=cds-HJH9165870.1;Parent=gene-O5D79_004476;Dbxref=NCBI_GP:HJH9165870.1;Name=HJH9165870.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004476;product=HAD family hydrolase;protein_id=HJH9165870.1;transl_table=11 DALFDJ020000031.1 tpg gene 49680 50816 . + . ID=gene-O5D79_004477;Name=O5D79_004477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004477 DALFDJ020000031.1 Protein Homology CDS 49680 50816 . + 0 ID=cds-HJH9165871.1;Parent=gene-O5D79_004477;Dbxref=NCBI_GP:HJH9165871.1;Name=HJH9165871.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.6;locus_tag=O5D79_004477;product=MFS transporter;protein_id=HJH9165871.1;transl_table=11 DALFDJ020000031.1 tpg gene 50809 51525 . + . ID=gene-O5D79_004478;Name=O5D79_004478;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004478 DALFDJ020000031.1 Protein Homology CDS 50809 51525 . + 0 ID=cds-HJH9165872.1;Parent=gene-O5D79_004478;Dbxref=NCBI_GP:HJH9165872.1;Name=HJH9165872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001560552.1;locus_tag=O5D79_004478;product=transketolase;protein_id=HJH9165872.1;transl_table=11 DALFDJ020000031.1 tpg gene 51535 52464 . + . ID=gene-O5D79_004479;Name=O5D79_004479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004479 DALFDJ020000031.1 Protein Homology CDS 51535 52464 . + 0 ID=cds-HJH9165873.1;Parent=gene-O5D79_004479;Dbxref=NCBI_GP:HJH9165873.1;Name=HJH9165873.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001560553.1;locus_tag=O5D79_004479;product=transketolase family protein;protein_id=HJH9165873.1;transl_table=11 DALFDJ020000031.1 tpg gene 52492 52780 . - . ID=gene-O5D79_004480;Name=O5D79_004480;end_range=52780,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004480;partial=true DALFDJ020000031.1 Protein Homology CDS 52492 52780 . - 1 ID=cds-HJH9165874.1;Parent=gene-O5D79_004480;Dbxref=NCBI_GP:HJH9165874.1;Name=HJH9165874.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=52780,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012422.6;locus_tag=O5D79_004480;partial=true;product=helix-turn-helix domain-containing protein;protein_id=HJH9165874.1;transl_table=11 ##sequence-region DALFDJ020000032.1 1 51165 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000032.1 tpg region 1 51165 . + . ID=DALFDJ020000032.1:1..51165;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000032.1 tpg gene 130 489 . - . ID=gene-O5D79_004481;Name=O5D79_004481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004481 DALFDJ020000032.1 Protein Homology CDS 130 489 . - 0 ID=cds-HJH9165875.1;Parent=gene-O5D79_004481;Dbxref=NCBI_GP:HJH9165875.1;Name=HJH9165875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001246999.1;locus_tag=O5D79_004481;product=hypothetical protein;protein_id=HJH9165875.1;transl_table=11 DALFDJ020000032.1 tpg gene 482 658 . - . ID=gene-O5D79_004482;Name=O5D79_004482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004482 DALFDJ020000032.1 Protein Homology CDS 482 658 . - 0 ID=cds-HJH9165876.1;Parent=gene-O5D79_004482;Dbxref=NCBI_GP:HJH9165876.1;Name=HJH9165876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120337.1;locus_tag=O5D79_004482;product=host cell division inhibitor Icd-like protein;protein_id=HJH9165876.1;transl_table=11 DALFDJ020000032.1 tpg gene 789 962 . + . ID=gene-O5D79_004483;Name=O5D79_004483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004483 DALFDJ020000032.1 Protein Homology CDS 789 962 . + 0 ID=cds-HJH9165877.1;Parent=gene-O5D79_004483;Dbxref=NCBI_GP:HJH9165877.1;Name=HJH9165877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001605077.1;locus_tag=O5D79_004483;product=hypothetical protein;protein_id=HJH9165877.1;transl_table=11 DALFDJ020000032.1 tpg gene 1415 2239 . - . ID=gene-O5D79_004484;Name=O5D79_004484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004484 DALFDJ020000032.1 Protein Homology CDS 1415 2239 . - 0 ID=cds-HJH9165878.1;Parent=gene-O5D79_004484;Dbxref=NCBI_GP:HJH9165878.1;Name=HJH9165878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001101697.1;locus_tag=O5D79_004484;product=hypothetical protein;protein_id=HJH9165878.1;transl_table=11 DALFDJ020000032.1 tpg gene 2236 3426 . - . ID=gene-O5D79_004485;Name=O5D79_004485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004485 DALFDJ020000032.1 Protein Homology CDS 2236 3426 . - 0 ID=cds-HJH9165879.1;Parent=gene-O5D79_004485;Dbxref=NCBI_GP:HJH9165879.1;Name=HJH9165879.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979344.1;locus_tag=O5D79_004485;product=tyrosine-type recombinase/integrase;protein_id=HJH9165879.1;transl_table=11 DALFDJ020000032.1 tpg gene 3591 3666 . - . ID=gene-O5D79_004486;Name=O5D79_004486;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_004486 DALFDJ020000032.1 tRNAscan-SE tRNA 3591 3666 . - . ID=rna-O5D79_004486;Parent=gene-O5D79_004486;anticodon=(pos:complement(3631..3633));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004486;product=tRNA-Thr DALFDJ020000032.1 tRNAscan-SE exon 3591 3666 . - . ID=exon-O5D79_004486-1;Parent=rna-O5D79_004486;anticodon=(pos:complement(3631..3633));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004486;product=tRNA-Thr DALFDJ020000032.1 tpg gene 3782 5032 . - . ID=gene-O5D79_004487;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=O5D79_004487 DALFDJ020000032.1 Protein Homology CDS 3782 5032 . - 0 ID=cds-HJH9165880.1;Parent=gene-O5D79_004487;Dbxref=NCBI_GP:HJH9165880.1;Name=HJH9165880.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459319.1;locus_tag=O5D79_004487;product=glutamate-5-semialdehyde dehydrogenase;protein_id=HJH9165880.1;transl_table=11 DALFDJ020000032.1 tpg gene 5044 6147 . - . ID=gene-O5D79_004488;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=O5D79_004488 DALFDJ020000032.1 Protein Homology CDS 5044 6147 . - 0 ID=cds-HJH9165881.1;Parent=gene-O5D79_004488;Dbxref=NCBI_GP:HJH9165881.1;Name=HJH9165881.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459318.1;locus_tag=O5D79_004488;product=glutamate 5-kinase;protein_id=HJH9165881.1;transl_table=11 DALFDJ020000032.1 tpg gene 6430 7482 . + . ID=gene-O5D79_004489;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=O5D79_004489 DALFDJ020000032.1 Protein Homology CDS 6430 7482 . + 0 ID=cds-HJH9165882.1;Parent=gene-O5D79_004489;Dbxref=NCBI_GP:HJH9165882.1;Name=HJH9165882.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459317.1;locus_tag=O5D79_004489;product=phosphoporin PhoE;protein_id=HJH9165882.1;transl_table=11 DALFDJ020000032.1 tpg gene 7533 7934 . - . ID=gene-O5D79_004490;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=O5D79_004490 DALFDJ020000032.1 Protein Homology CDS 7533 7934 . - 0 ID=cds-HJH9165883.1;Parent=gene-O5D79_004490;Dbxref=NCBI_GP:HJH9165883.1;Name=HJH9165883.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459316.1;locus_tag=O5D79_004490;product=sigma factor-binding protein Crl;protein_id=HJH9165883.1;transl_table=11 DALFDJ020000032.1 tpg gene 7992 9236 . - . ID=gene-O5D79_004491;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=O5D79_004491 DALFDJ020000032.1 Protein Homology CDS 7992 9236 . - 0 ID=cds-HJH9165884.1;Parent=gene-O5D79_004491;Dbxref=NCBI_GP:HJH9165884.1;Name=HJH9165884.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459315.1;locus_tag=O5D79_004491;product=esterase FrsA;protein_id=HJH9165884.1;transl_table=11 DALFDJ020000032.1 tpg gene 9325 9783 . - . ID=gene-O5D79_004492;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=O5D79_004492 DALFDJ020000032.1 Protein Homology CDS 9325 9783 . - 0 ID=cds-HJH9165885.1;Parent=gene-O5D79_004492;Dbxref=NCBI_GP:HJH9165885.1;Name=HJH9165885.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=O5D79_004492;product=xanthine phosphoribosyltransferase;protein_id=HJH9165885.1;transl_table=11 DALFDJ020000032.1 tpg gene 10032 11489 . + . ID=gene-O5D79_004493;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=O5D79_004493 DALFDJ020000032.1 Protein Homology CDS 10032 11489 . + 0 ID=cds-HJH9165886.1;Parent=gene-O5D79_004493;Dbxref=NCBI_GP:HJH9165886.1;Name=HJH9165886.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459313.1;locus_tag=O5D79_004493;product=cytosol nonspecific dipeptidase;protein_id=HJH9165886.1;transl_table=11 DALFDJ020000032.1 tpg gene 11644 12258 . - . ID=gene-O5D79_004494;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=O5D79_004494 DALFDJ020000032.1 Protein Homology CDS 11644 12258 . - 0 ID=cds-HJH9165887.1;Parent=gene-O5D79_004494;Dbxref=NCBI_GP:HJH9165887.1;Name=HJH9165887.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459312.1;locus_tag=O5D79_004494;product=peptide chain release factor H;protein_id=HJH9165887.1;transl_table=11 DALFDJ020000032.1 tpg gene 12255 13394 . - . ID=gene-O5D79_004495;Name=O5D79_004495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004495 DALFDJ020000032.1 Protein Homology CDS 12255 13394 . - 0 ID=cds-HJH9165888.1;Parent=gene-O5D79_004495;Dbxref=NCBI_GP:HJH9165888.1;Name=HJH9165888.1;Ontology_term=GO:0006415;gbkey=CDS;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006895405.1;locus_tag=O5D79_004495;product=RNA ligase RtcB family protein;protein_id=HJH9165888.1;transl_table=11 DALFDJ020000032.1 tpg gene 13614 14669 . - . ID=gene-O5D79_004496;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=O5D79_004496 DALFDJ020000032.1 Protein Homology CDS 13614 14669 . - 0 ID=cds-HJH9165889.1;Parent=gene-O5D79_004496;Dbxref=NCBI_GP:HJH9165889.1;Name=HJH9165889.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459311.1;locus_tag=O5D79_004496;product=DNA polymerase IV;protein_id=HJH9165889.1;transl_table=11 DALFDJ020000032.1 tpg gene 14919 15659 . + . ID=gene-O5D79_004497;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=O5D79_004497 DALFDJ020000032.1 Protein Homology CDS 14919 15659 . + 0 ID=cds-HJH9165890.1;Parent=gene-O5D79_004497;Dbxref=NCBI_GP:HJH9165890.1;Name=HJH9165890.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459310.1;locus_tag=O5D79_004497;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=HJH9165890.1;transl_table=11 DALFDJ020000032.1 tpg gene 15630 16397 . - . ID=gene-O5D79_004498;Name=O5D79_004498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004498 DALFDJ020000032.1 Protein Homology CDS 15630 16397 . - 0 ID=cds-HJH9165891.1;Parent=gene-O5D79_004498;Dbxref=NCBI_GP:HJH9165891.1;Name=HJH9165891.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459309.1;locus_tag=O5D79_004498;product=class II glutamine amidotransferase;protein_id=HJH9165891.1;transl_table=11 DALFDJ020000032.1 tpg gene 16610 17188 . - . ID=gene-O5D79_004499;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=O5D79_004499 DALFDJ020000032.1 Protein Homology CDS 16610 17188 . - 0 ID=cds-HJH9165892.1;Parent=gene-O5D79_004499;Dbxref=NCBI_GP:HJH9165892.1;Name=HJH9165892.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459308.1;locus_tag=O5D79_004499;product=D-sedoheptulose 7-phosphate isomerase;protein_id=HJH9165892.1;transl_table=11 DALFDJ020000032.1 tpg gene 17428 19872 . + . ID=gene-O5D79_004500;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=O5D79_004500 DALFDJ020000032.1 Protein Homology CDS 17428 19872 . + 0 ID=cds-HJH9165893.1;Parent=gene-O5D79_004500;Dbxref=NCBI_GP:HJH9165893.1;Name=HJH9165893.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=O5D79_004500;product=acyl-CoA dehydrogenase FadE;protein_id=HJH9165893.1;transl_table=11 DALFDJ020000032.1 tpg gene 19981 20748 . + . ID=gene-O5D79_004501;Name=O5D79_004501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004501 DALFDJ020000032.1 Protein Homology CDS 19981 20748 . + 0 ID=cds-HJH9165894.1;Parent=gene-O5D79_004501;Dbxref=NCBI_GP:HJH9165894.1;Name=HJH9165894.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459306.1;locus_tag=O5D79_004501;product=amidohydrolase;protein_id=HJH9165894.1;transl_table=11 DALFDJ020000032.1 tpg gene 21058 21465 . + . ID=gene-O5D79_004502;Name=O5D79_004502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004502 DALFDJ020000032.1 Protein Homology CDS 21058 21465 . + 0 ID=cds-HJH9165895.1;Parent=gene-O5D79_004502;Dbxref=NCBI_GP:HJH9165895.1;Name=HJH9165895.1;Ontology_term=GO:0061077,GO:0044183,GO:0051082;gbkey=CDS;go_function=protein folding chaperone|0044183||IEA,unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459305.1;locus_tag=O5D79_004502;product=Spy/CpxP family protein refolding chaperone;protein_id=HJH9165895.1;transl_table=11 DALFDJ020000032.1 tpg gene 21805 22524 . + . ID=gene-O5D79_004503;Name=pagN;gbkey=Gene;gene=pagN;gene_biotype=protein_coding;locus_tag=O5D79_004503 DALFDJ020000032.1 Protein Homology CDS 21805 22524 . + 0 ID=cds-HJH9165896.1;Parent=gene-O5D79_004503;Dbxref=NCBI_GP:HJH9165896.1;Name=HJH9165896.1;gbkey=CDS;gene=pagN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459304.1;locus_tag=O5D79_004503;product=adhesin/invasin protein PagN;protein_id=HJH9165896.1;transl_table=11 DALFDJ020000032.1 tpg gene 22528 22743 . - . ID=gene-O5D79_004504;Name=O5D79_004504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004504 DALFDJ020000032.1 Protein Homology CDS 22528 22743 . - 0 ID=cds-HJH9165897.1;Parent=gene-O5D79_004504;Dbxref=NCBI_GP:HJH9165897.1;Name=HJH9165897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459303.1;locus_tag=O5D79_004504;product=hypothetical protein;protein_id=HJH9165897.1;transl_table=11 DALFDJ020000032.1 tpg gene 22863 23810 . - . ID=gene-O5D79_004505;Name=O5D79_004505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004505 DALFDJ020000032.1 Protein Homology CDS 22863 23810 . - 0 ID=cds-HJH9165898.1;Parent=gene-O5D79_004505;Dbxref=NCBI_GP:HJH9165898.1;Name=HJH9165898.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459302.1;locus_tag=O5D79_004505;product=LysR family transcriptional regulator;protein_id=HJH9165898.1;transl_table=11 DALFDJ020000032.1 tpg pseudogene 24307 24544 . - . ID=gene-O5D79_004506;Name=O5D79_004506;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004506;pseudo=true DALFDJ020000032.1 Protein Homology CDS 24307 24544 . - 0 ID=cds-O5D79_004506;Parent=gene-O5D79_004506;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602066.1;locus_tag=O5D79_004506;product=PerC family transcriptional regulator;pseudo=true;transl_table=11 DALFDJ020000032.1 tpg gene 24627 25448 . - . ID=gene-O5D79_004507;Name=O5D79_004507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004507 DALFDJ020000032.1 Protein Homology CDS 24627 25448 . - 0 ID=cds-HJH9165899.1;Parent=gene-O5D79_004507;Dbxref=NCBI_GP:HJH9165899.1;Name=HJH9165899.1;Ontology_term=GO:0005975,GO:0016787,GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459301.1;locus_tag=O5D79_004507;product=polysaccharide deacetylase family protein;protein_id=HJH9165899.1;transl_table=11 DALFDJ020000032.1 tpg gene 25856 26326 . - . ID=gene-O5D79_004508;Name=afaD;gbkey=Gene;gene=afaD;gene_biotype=protein_coding;locus_tag=O5D79_004508 DALFDJ020000032.1 Protein Homology CDS 25856 26326 . - 0 ID=cds-HJH9165900.1;Parent=gene-O5D79_004508;Dbxref=NCBI_GP:HJH9165900.1;Name=HJH9165900.1;gbkey=CDS;gene=afaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459300.1;locus_tag=O5D79_004508;product=AfaD family invasin;protein_id=HJH9165900.1;transl_table=11 DALFDJ020000032.1 tpg gene 26348 28858 . - . ID=gene-O5D79_004509;Name=O5D79_004509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004509 DALFDJ020000032.1 Protein Homology CDS 26348 28858 . - 0 ID=cds-HJH9165901.1;Parent=gene-O5D79_004509;Dbxref=NCBI_GP:HJH9165901.1;Name=HJH9165901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459299.1;locus_tag=O5D79_004509;product=fimbrial biogenesis outer membrane usher protein;protein_id=HJH9165901.1;transl_table=11 DALFDJ020000032.1 tpg gene 28882 29622 . - . ID=gene-O5D79_004510;Name=safB;gbkey=Gene;gene=safB;gene_biotype=protein_coding;locus_tag=O5D79_004510 DALFDJ020000032.1 Protein Homology CDS 28882 29622 . - 0 ID=cds-HJH9165902.1;Parent=gene-O5D79_004510;Dbxref=NCBI_GP:HJH9165902.1;Name=HJH9165902.1;gbkey=CDS;gene=safB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465813.1;locus_tag=O5D79_004510;product=pili assembly chaperone SafB;protein_id=HJH9165902.1;transl_table=11 DALFDJ020000032.1 tpg gene 29697 30194 . - . ID=gene-O5D79_004511;Name=O5D79_004511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004511 DALFDJ020000032.1 Protein Homology CDS 29697 30194 . - 0 ID=cds-HJH9165903.1;Parent=gene-O5D79_004511;Dbxref=NCBI_GP:HJH9165903.1;Name=HJH9165903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789648.1;locus_tag=O5D79_004511;product=Saf-pilin pilus formation protein SafA;protein_id=HJH9165903.1;transl_table=11 DALFDJ020000032.1 tpg gene 30327 30821 . - . ID=gene-O5D79_004512;Name=O5D79_004512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004512 DALFDJ020000032.1 Protein Homology CDS 30327 30821 . - 0 ID=cds-HJH9165904.1;Parent=gene-O5D79_004512;Dbxref=NCBI_GP:HJH9165904.1;Name=HJH9165904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789624.1;locus_tag=O5D79_004512;product=hypothetical protein;protein_id=HJH9165904.1;transl_table=11 DALFDJ020000032.1 tpg pseudogene 31577 32150 . - . ID=gene-O5D79_004513;Name=O5D79_004513;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004513;pseudo=true DALFDJ020000032.1 Protein Homology CDS 31577 32150 . - 0 ID=cds-O5D79_004513;Parent=gene-O5D79_004513;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611501.1;locus_tag=O5D79_004513;product=integrase core domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000032.1 tpg gene 32084 32281 . - . ID=gene-O5D79_004514;Name=O5D79_004514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004514 DALFDJ020000032.1 Protein Homology CDS 32084 32281 . - 0 ID=cds-HJH9165905.1;Parent=gene-O5D79_004514;Dbxref=NCBI_GP:HJH9165905.1;Name=HJH9165905.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.6;locus_tag=O5D79_004514;product=transposase;protein_id=HJH9165905.1;transl_table=11 DALFDJ020000032.1 tpg gene 32334 32582 . + . ID=gene-O5D79_004515;Name=O5D79_004515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004515 DALFDJ020000032.1 Protein Homology CDS 32334 32582 . + 0 ID=cds-HJH9165906.1;Parent=gene-O5D79_004515;Dbxref=NCBI_GP:HJH9165906.1;Name=HJH9165906.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_446753.1;locus_tag=O5D79_004515;product=SymE family type I addiction module toxin;protein_id=HJH9165906.1;transl_table=11 DALFDJ020000032.1 tpg gene 32714 32992 . - . ID=gene-O5D79_004516;Name=O5D79_004516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004516 DALFDJ020000032.1 Protein Homology CDS 32714 32992 . - 0 ID=cds-HJH9165907.1;Parent=gene-O5D79_004516;Dbxref=NCBI_GP:HJH9165907.1;Name=HJH9165907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459293.1;locus_tag=O5D79_004516;product=hypothetical protein;protein_id=HJH9165907.1;transl_table=11 DALFDJ020000032.1 tpg pseudogene 33123 33280 . - . ID=gene-O5D79_004517;Name=O5D79_004517;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004517;pseudo=true DALFDJ020000032.1 Protein Homology CDS 33123 33280 . - 0 ID=cds-O5D79_004517;Parent=gene-O5D79_004517;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238642.1;locus_tag=O5D79_004517;product=RHS repeat-associated core domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000032.1 tpg gene 33310 33777 . - . ID=gene-O5D79_004518;Name=O5D79_004518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004518 DALFDJ020000032.1 Protein Homology CDS 33310 33777 . - 0 ID=cds-HJH9165908.1;Parent=gene-O5D79_004518;Dbxref=NCBI_GP:HJH9165908.1;Name=HJH9165908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828176.1;locus_tag=O5D79_004518;product=sugar tyrosine-protein kinase;protein_id=HJH9165908.1;transl_table=11 DALFDJ020000032.1 tpg gene 34650 34883 . - . ID=gene-O5D79_004519;Name=O5D79_004519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004519 DALFDJ020000032.1 GeneMarkS-2+ CDS 34650 34883 . - 0 ID=cds-HJH9165909.1;Parent=gene-O5D79_004519;Dbxref=NCBI_GP:HJH9165909.1;Name=HJH9165909.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004519;product=hypothetical protein;protein_id=HJH9165909.1;transl_table=11 DALFDJ020000032.1 tpg pseudogene 34908 35080 . - . ID=gene-O5D79_004520;Name=O5D79_004520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004520;pseudo=true DALFDJ020000032.1 Protein Homology CDS 34908 35080 . - 0 ID=cds-O5D79_004520;Parent=gene-O5D79_004520;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=O5D79_004520;product=RHS repeat-associated core domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000032.1 tpg gene 35217 35492 . + . ID=gene-O5D79_004521;Name=O5D79_004521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004521 DALFDJ020000032.1 Protein Homology CDS 35217 35492 . + 0 ID=cds-HJH9165910.1;Parent=gene-O5D79_004521;Dbxref=NCBI_GP:HJH9165910.1;Name=HJH9165910.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994228.1;locus_tag=O5D79_004521;product=SymE family type I addiction module toxin;protein_id=HJH9165910.1;transl_table=11 DALFDJ020000032.1 tpg gene 35540 35971 . - . ID=gene-O5D79_004522;Name=O5D79_004522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004522 DALFDJ020000032.1 Protein Homology CDS 35540 35971 . - 0 ID=cds-HJH9165911.1;Parent=gene-O5D79_004522;Dbxref=NCBI_GP:HJH9165911.1;Name=HJH9165911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000778606.1;locus_tag=O5D79_004522;product=hypothetical protein;protein_id=HJH9165911.1;transl_table=11 DALFDJ020000032.1 tpg pseudogene 35973 38828 . - . ID=gene-O5D79_004523;Name=O5D79_004523;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004523;pseudo=true DALFDJ020000032.1 Protein Homology CDS 35973 38828 . - 0 ID=cds-O5D79_004523;Parent=gene-O5D79_004523;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000503215.1;locus_tag=O5D79_004523;product=RHS repeat-associated core domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000032.1 tpg gene 38819 39085 . + . ID=gene-O5D79_004524;Name=O5D79_004524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004524 DALFDJ020000032.1 Protein Homology CDS 38819 39085 . + 0 ID=cds-HJH9165912.1;Parent=gene-O5D79_004524;Dbxref=NCBI_GP:HJH9165912.1;Name=HJH9165912.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632802.1;locus_tag=O5D79_004524;product=SymE family type I addiction module toxin;protein_id=HJH9165912.1;transl_table=11 DALFDJ020000032.1 tpg gene 39203 39541 . - . ID=gene-O5D79_004525;Name=O5D79_004525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004525 DALFDJ020000032.1 Protein Homology CDS 39203 39541 . - 0 ID=cds-HJH9165913.1;Parent=gene-O5D79_004525;Dbxref=NCBI_GP:HJH9165913.1;Name=HJH9165913.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049362.1;locus_tag=O5D79_004525;product=DUF7716 domain-containing protein;protein_id=HJH9165913.1;transl_table=11 DALFDJ020000032.1 tpg gene 39563 43693 . - . ID=gene-O5D79_004526;Name=O5D79_004526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004526 DALFDJ020000032.1 Protein Homology CDS 39563 43693 . - 0 ID=cds-HJH9165914.1;Parent=gene-O5D79_004526;Dbxref=NCBI_GP:HJH9165914.1;Name=HJH9165914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=O5D79_004526;product=RHS repeat-associated core domain-containing protein;protein_id=HJH9165914.1;transl_table=11 DALFDJ020000032.1 tpg gene 43712 44158 . - . ID=gene-O5D79_004527;Name=O5D79_004527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004527 DALFDJ020000032.1 Protein Homology CDS 43712 44158 . - 0 ID=cds-HJH9165915.1;Parent=gene-O5D79_004527;Dbxref=NCBI_GP:HJH9165915.1;Name=HJH9165915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459288.1;locus_tag=O5D79_004527;product=DcrB-related protein;protein_id=HJH9165915.1;transl_table=11 DALFDJ020000032.1 tpg gene 44182 46371 . - . ID=gene-O5D79_004528;Name=O5D79_004528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004528 DALFDJ020000032.1 Protein Homology CDS 44182 46371 . - 0 ID=cds-HJH9165916.1;Parent=gene-O5D79_004528;Dbxref=NCBI_GP:HJH9165916.1;Name=HJH9165916.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459287.1;locus_tag=O5D79_004528;product=type VI secretion system Vgr family protein;protein_id=HJH9165916.1;transl_table=11 DALFDJ020000032.1 tpg gene 46768 47289 . - . ID=gene-O5D79_004529;Name=O5D79_004529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004529 DALFDJ020000032.1 Protein Homology CDS 46768 47289 . - 0 ID=cds-HJH9165917.1;Parent=gene-O5D79_004529;Dbxref=NCBI_GP:HJH9165917.1;Name=HJH9165917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459286.1;locus_tag=O5D79_004529;product=DUF2778 domain-containing protein;protein_id=HJH9165917.1;transl_table=11 DALFDJ020000032.1 tpg gene 47313 47729 . - . ID=gene-O5D79_004530;Name=O5D79_004530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004530 DALFDJ020000032.1 Protein Homology CDS 47313 47729 . - 0 ID=cds-HJH9165918.1;Parent=gene-O5D79_004530;Dbxref=NCBI_GP:HJH9165918.1;Name=HJH9165918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459285.1;locus_tag=O5D79_004530;product=DUF2195 family protein;protein_id=HJH9165918.1;transl_table=11 DALFDJ020000032.1 tpg gene 47969 48346 . - . ID=gene-O5D79_004531;Name=O5D79_004531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004531 DALFDJ020000032.1 Protein Homology CDS 47969 48346 . - 0 ID=cds-HJH9165919.1;Parent=gene-O5D79_004531;Dbxref=NCBI_GP:HJH9165919.1;Name=HJH9165919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000289912.1;locus_tag=O5D79_004531;product=Imm50 family immunity protein;protein_id=HJH9165919.1;transl_table=11 DALFDJ020000032.1 tpg gene 48357 49178 . - . ID=gene-O5D79_004532;Name=O5D79_004532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004532 DALFDJ020000032.1 Protein Homology CDS 48357 49178 . - 0 ID=cds-HJH9165920.1;Parent=gene-O5D79_004532;Dbxref=NCBI_GP:HJH9165920.1;Name=HJH9165920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000741903.1;locus_tag=O5D79_004532;product=HNH/endonuclease VII fold putative polymorphic toxin;protein_id=HJH9165920.1;transl_table=11 DALFDJ020000032.1 tpg pseudogene 49516 49632 . - . ID=gene-O5D79_004533;Name=O5D79_004533;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004533;pseudo=true DALFDJ020000032.1 Protein Homology CDS 49516 49632 . - 0 ID=cds-O5D79_004533;Parent=gene-O5D79_004533;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=O5D79_004533;product=hypothetical protein;pseudo=true;transl_table=11 DALFDJ020000032.1 tpg gene 49754 50323 . + . ID=gene-O5D79_004534;Name=O5D79_004534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004534 DALFDJ020000032.1 Protein Homology CDS 49754 50323 . + 0 ID=cds-HJH9165921.1;Parent=gene-O5D79_004534;Dbxref=NCBI_GP:HJH9165921.1;Name=HJH9165921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005973865.1;locus_tag=O5D79_004534;product=DUF4291 domain-containing protein;protein_id=HJH9165921.1;transl_table=11 DALFDJ020000032.1 tpg gene 50369 50917 . - . ID=gene-O5D79_004535;Name=O5D79_004535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004535 DALFDJ020000032.1 Protein Homology CDS 50369 50917 . - 0 ID=cds-HJH9165922.1;Parent=gene-O5D79_004535;Dbxref=NCBI_GP:HJH9165922.1;Name=HJH9165922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004386342.1;locus_tag=O5D79_004535;product=HEAT repeat domain-containing protein;protein_id=HJH9165922.1;transl_table=11 DALFDJ020000032.1 tpg gene 50914 51165 . - . ID=gene-O5D79_004536;Name=O5D79_004536;end_range=51165,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004536;partial=true DALFDJ020000032.1 GeneMarkS-2+ CDS 50914 51165 . - 0 ID=cds-HJH9165923.1;Parent=gene-O5D79_004536;Dbxref=NCBI_GP:HJH9165923.1;Name=HJH9165923.1;end_range=51165,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004536;partial=true;product=hypothetical protein;protein_id=HJH9165923.1;transl_table=11 ##sequence-region DALFDJ020000033.1 1 51027 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000033.1 tpg region 1 51027 . + . ID=DALFDJ020000033.1:1..51027;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000033.1 tpg gene 137 2710 . - . ID=gene-O5D79_004537;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=O5D79_004537 DALFDJ020000033.1 Protein Homology CDS 137 2710 . - 0 ID=cds-HJH9165924.1;Parent=gene-O5D79_004537;Dbxref=NCBI_GP:HJH9165924.1;Name=HJH9165924.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=O5D79_004537;product=ATP-dependent chaperone ClpB;protein_id=HJH9165924.1;transl_table=11 DALFDJ020000033.1 tpg gene 2840 3571 . - . ID=gene-O5D79_004538;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=O5D79_004538 DALFDJ020000033.1 Protein Homology CDS 2840 3571 . - 0 ID=cds-HJH9165925.1;Parent=gene-O5D79_004538;Dbxref=NCBI_GP:HJH9165925.1;Name=HJH9165925.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=O5D79_004538;product=purine nucleoside phosphorylase YfiH;protein_id=HJH9165925.1;transl_table=11 DALFDJ020000033.1 tpg gene 3568 4548 . - . ID=gene-O5D79_004539;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=O5D79_004539 DALFDJ020000033.1 Protein Homology CDS 3568 4548 . - 0 ID=cds-HJH9165926.1;Parent=gene-O5D79_004539;Dbxref=NCBI_GP:HJH9165926.1;Name=HJH9165926.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=O5D79_004539;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=HJH9165926.1;transl_table=11 DALFDJ020000033.1 tpg gene 4680 5417 . + . ID=gene-O5D79_004540;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=O5D79_004540 DALFDJ020000033.1 Protein Homology CDS 4680 5417 . + 0 ID=cds-HJH9165927.1;Parent=gene-O5D79_004540;Dbxref=NCBI_GP:HJH9165927.1;Name=HJH9165927.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=O5D79_004540;product=outer membrane protein assembly factor BamD;protein_id=HJH9165927.1;transl_table=11 DALFDJ020000033.1 tpg gene 5689 6027 . + . ID=gene-O5D79_004541;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=O5D79_004541 DALFDJ020000033.1 Protein Homology CDS 5689 6027 . + 0 ID=cds-HJH9165928.1;Parent=gene-O5D79_004541;Dbxref=NCBI_GP:HJH9165928.1;Name=HJH9165928.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461595.1;locus_tag=O5D79_004541;product=ribosome-associated translation inhibitor RaiA;protein_id=HJH9165928.1;transl_table=11 DALFDJ020000033.1 cmsearch sequence_feature 6130 6255 . + . ID=id-DALFDJ020000033.1:6130..6255;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 DALFDJ020000033.1 tpg gene 6131 6178 . + . ID=gene-O5D79_004542;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=O5D79_004542 DALFDJ020000033.1 Protein Homology CDS 6131 6178 . + 0 ID=cds-HJH9165929.1;Parent=gene-O5D79_004542;Dbxref=NCBI_GP:HJH9165929.1;Name=HJH9165929.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_449055.1;locus_tag=O5D79_004542;product=pheA operon leader peptide PheL;protein_id=HJH9165929.1;transl_table=11 DALFDJ020000033.1 tpg gene 6278 7438 . + . ID=gene-O5D79_004543;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=O5D79_004543 DALFDJ020000033.1 Protein Homology CDS 6278 7438 . + 0 ID=cds-HJH9165930.1;Parent=gene-O5D79_004543;Dbxref=NCBI_GP:HJH9165930.1;Name=HJH9165930.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461597.1;locus_tag=O5D79_004543;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=HJH9165930.1;transl_table=11 DALFDJ020000033.1 tpg gene 7399 8307 . - . ID=gene-O5D79_004544;Name=O5D79_004544;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004544 DALFDJ020000033.1 Protein Homology CDS 7399 8307 . - 0 ID=cds-HJH9165931.1;Parent=gene-O5D79_004544;Dbxref=NCBI_GP:HJH9165931.1;Name=HJH9165931.1;Ontology_term=GO:0005509,GO:0016787,GO:0046872;gbkey=CDS;go_function=calcium ion binding|0005509||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461598.1;locus_tag=O5D79_004544;product=SMP-30/gluconolactonase/LRE family protein;protein_id=HJH9165931.1;transl_table=11 DALFDJ020000033.1 tpg gene 8365 9486 . - . ID=gene-O5D79_004545;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=O5D79_004545 DALFDJ020000033.1 Protein Homology CDS 8365 9486 . - 0 ID=cds-HJH9165932.1;Parent=gene-O5D79_004545;Dbxref=NCBI_GP:HJH9165932.1;Name=HJH9165932.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461599.1;locus_tag=O5D79_004545;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=HJH9165932.1;transl_table=11 DALFDJ020000033.1 tpg gene 9496 10566 . - . ID=gene-O5D79_004546;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=O5D79_004546 DALFDJ020000033.1 Protein Homology CDS 9496 10566 . - 0 ID=cds-HJH9165933.1;Parent=gene-O5D79_004546;Dbxref=NCBI_GP:HJH9165933.1;Name=HJH9165933.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461600.1;locus_tag=O5D79_004546;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=HJH9165933.1;transl_table=11 DALFDJ020000033.1 tpg gene 11006 11524 . + . ID=gene-O5D79_004547;Name=O5D79_004547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004547 DALFDJ020000033.1 Protein Homology CDS 11006 11524 . + 0 ID=cds-HJH9165934.1;Parent=gene-O5D79_004547;Dbxref=NCBI_GP:HJH9165934.1;Name=HJH9165934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461601.1;locus_tag=O5D79_004547;product=YfiR family protein;protein_id=HJH9165934.1;transl_table=11 DALFDJ020000033.1 tpg gene 11517 12737 . + . ID=gene-O5D79_004548;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=O5D79_004548 DALFDJ020000033.1 Protein Homology CDS 11517 12737 . + 0 ID=cds-HJH9165935.1;Parent=gene-O5D79_004548;Dbxref=NCBI_GP:HJH9165935.1;Name=HJH9165935.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461602.1;locus_tag=O5D79_004548;product=diguanylate cyclase DgcN;protein_id=HJH9165935.1;transl_table=11 DALFDJ020000033.1 tpg gene 12894 13241 . - . ID=gene-O5D79_004549;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=O5D79_004549 DALFDJ020000033.1 Protein Homology CDS 12894 13241 . - 0 ID=cds-HJH9165936.1;Parent=gene-O5D79_004549;Dbxref=NCBI_GP:HJH9165936.1;Name=HJH9165936.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=O5D79_004549;product=50S ribosomal protein L19;protein_id=HJH9165936.1;transl_table=11 DALFDJ020000033.1 tpg gene 13282 14049 . - . ID=gene-O5D79_004550;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=O5D79_004550 DALFDJ020000033.1 Protein Homology CDS 13282 14049 . - 0 ID=cds-HJH9165937.1;Parent=gene-O5D79_004550;Dbxref=NCBI_GP:HJH9165937.1;Name=HJH9165937.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461604.1;locus_tag=O5D79_004550;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=HJH9165937.1;transl_table=11 DALFDJ020000033.1 tpg gene 14094 14642 . - . ID=gene-O5D79_004551;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=O5D79_004551 DALFDJ020000033.1 Protein Homology CDS 14094 14642 . - 0 ID=cds-HJH9165938.1;Parent=gene-O5D79_004551;Dbxref=NCBI_GP:HJH9165938.1;Name=HJH9165938.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=O5D79_004551;product=ribosome maturation factor RimM;protein_id=HJH9165938.1;transl_table=11 DALFDJ020000033.1 tpg gene 14661 14909 . - . ID=gene-O5D79_004552;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=O5D79_004552 DALFDJ020000033.1 Protein Homology CDS 14661 14909 . - 0 ID=cds-HJH9165939.1;Parent=gene-O5D79_004552;Dbxref=NCBI_GP:HJH9165939.1;Name=HJH9165939.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=O5D79_004552;product=30S ribosomal protein S16;protein_id=HJH9165939.1;transl_table=11 DALFDJ020000033.1 tpg gene 15223 16584 . - . ID=gene-O5D79_004553;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=O5D79_004553 DALFDJ020000033.1 Protein Homology CDS 15223 16584 . - 0 ID=cds-HJH9165940.1;Parent=gene-O5D79_004553;Dbxref=NCBI_GP:HJH9165940.1;Name=HJH9165940.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=O5D79_004553;product=signal recognition particle protein;protein_id=HJH9165940.1;transl_table=11 DALFDJ020000033.1 tpg gene 16750 17541 . + . ID=gene-O5D79_004554;Name=O5D79_004554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004554 DALFDJ020000033.1 Protein Homology CDS 16750 17541 . + 0 ID=cds-HJH9165941.1;Parent=gene-O5D79_004554;Dbxref=NCBI_GP:HJH9165941.1;Name=HJH9165941.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461608.1;locus_tag=O5D79_004554;product=cytochrome C assembly family protein;protein_id=HJH9165941.1;transl_table=11 DALFDJ020000033.1 tpg gene 17561 18847 . + . ID=gene-O5D79_004555;Name=O5D79_004555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004555 DALFDJ020000033.1 Protein Homology CDS 17561 18847 . + 0 ID=cds-HJH9165942.1;Parent=gene-O5D79_004555;Dbxref=NCBI_GP:HJH9165942.1;Name=HJH9165942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=O5D79_004555;product=HlyC/CorC family transporter;protein_id=HJH9165942.1;transl_table=11 DALFDJ020000033.1 tpg gene 18968 19573 . + . ID=gene-O5D79_004556;Name=O5D79_004556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004556 DALFDJ020000033.1 Protein Homology CDS 18968 19573 . + 0 ID=cds-HJH9165943.1;Parent=gene-O5D79_004556;Dbxref=NCBI_GP:HJH9165943.1;Name=HJH9165943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461610.1;locus_tag=O5D79_004556;product=DUF6630 family protein;protein_id=HJH9165943.1;transl_table=11 DALFDJ020000033.1 tpg gene 19608 20198 . - . ID=gene-O5D79_004557;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=O5D79_004557 DALFDJ020000033.1 Protein Homology CDS 19608 20198 . - 0 ID=cds-HJH9165944.1;Parent=gene-O5D79_004557;Dbxref=NCBI_GP:HJH9165944.1;Name=HJH9165944.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461611.1;locus_tag=O5D79_004557;product=nucleotide exchange factor GrpE;protein_id=HJH9165944.1;transl_table=11 DALFDJ020000033.1 tpg gene 20321 21199 . + . ID=gene-O5D79_004558;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=O5D79_004558 DALFDJ020000033.1 Protein Homology CDS 20321 21199 . + 0 ID=cds-HJH9165945.1;Parent=gene-O5D79_004558;Dbxref=NCBI_GP:HJH9165945.1;Name=HJH9165945.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=O5D79_004558;product=NAD(+) kinase;protein_id=HJH9165945.1;transl_table=11 DALFDJ020000033.1 tpg gene 21285 22946 . + . ID=gene-O5D79_004559;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=O5D79_004559 DALFDJ020000033.1 Protein Homology CDS 21285 22946 . + 0 ID=cds-HJH9165946.1;Parent=gene-O5D79_004559;Dbxref=NCBI_GP:HJH9165946.1;Name=HJH9165946.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=O5D79_004559;product=DNA repair protein RecN;protein_id=HJH9165946.1;transl_table=11 DALFDJ020000033.1 tpg gene 23095 23433 . + . ID=gene-O5D79_004560;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=O5D79_004560 DALFDJ020000033.1 Protein Homology CDS 23095 23433 . + 0 ID=cds-HJH9165947.1;Parent=gene-O5D79_004560;Dbxref=NCBI_GP:HJH9165947.1;Name=HJH9165947.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461615.1;locus_tag=O5D79_004560;product=outer membrane protein assembly factor BamE;protein_id=HJH9165947.1;transl_table=11 DALFDJ020000033.1 tpg gene 23599 23889 . - . ID=gene-O5D79_004561;Name=O5D79_004561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004561 DALFDJ020000033.1 Protein Homology CDS 23599 23889 . - 0 ID=cds-HJH9165948.1;Parent=gene-O5D79_004561;Dbxref=NCBI_GP:HJH9165948.1;Name=HJH9165948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461616.1;locus_tag=O5D79_004561;product=RnfH family protein;protein_id=HJH9165948.1;transl_table=11 DALFDJ020000033.1 tpg gene 23879 24316 . - . ID=gene-O5D79_004562;Name=O5D79_004562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004562 DALFDJ020000033.1 Protein Homology CDS 23879 24316 . - 0 ID=cds-HJH9165949.1;Parent=gene-O5D79_004562;Dbxref=NCBI_GP:HJH9165949.1;Name=HJH9165949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543334.1;locus_tag=O5D79_004562;product=type II toxin-antitoxin system RatA family toxin;protein_id=HJH9165949.1;transl_table=11 DALFDJ020000033.1 tpg gene 24505 24987 . + . ID=gene-O5D79_004563;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=O5D79_004563 DALFDJ020000033.1 Protein Homology CDS 24505 24987 . + 0 ID=cds-HJH9165950.1;Parent=gene-O5D79_004563;Dbxref=NCBI_GP:HJH9165950.1;Name=HJH9165950.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461618.1;locus_tag=O5D79_004563;product=SsrA-binding protein SmpB;protein_id=HJH9165950.1;transl_table=11 DALFDJ020000033.1 tpg gene 25602 37076 . + . ID=gene-O5D79_004564;Name=bapA;gbkey=Gene;gene=bapA;gene_biotype=protein_coding;locus_tag=O5D79_004564 DALFDJ020000033.1 Protein Homology CDS 25602 37076 . + 0 ID=cds-HJH9165951.1;Parent=gene-O5D79_004564;Dbxref=NCBI_GP:HJH9165951.1;Name=HJH9165951.1;gbkey=CDS;gene=bapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001237670.1;locus_tag=O5D79_004564;product=biofilm-associated protein BapA;protein_id=HJH9165951.1;transl_table=11 DALFDJ020000033.1 tpg gene 37141 38550 . + . ID=gene-O5D79_004565;Name=O5D79_004565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004565 DALFDJ020000033.1 Protein Homology CDS 37141 38550 . + 0 ID=cds-HJH9165952.1;Parent=gene-O5D79_004565;Dbxref=NCBI_GP:HJH9165952.1;Name=HJH9165952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461619.1;locus_tag=O5D79_004565;product=TolC family outer membrane protein;protein_id=HJH9165952.1;transl_table=11 DALFDJ020000033.1 tpg gene 38547 40727 . + . ID=gene-O5D79_004566;Name=O5D79_004566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004566 DALFDJ020000033.1 Protein Homology CDS 38547 40727 . + 0 ID=cds-HJH9165953.1;Parent=gene-O5D79_004566;Dbxref=NCBI_GP:HJH9165953.1;Name=HJH9165953.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461620.1;locus_tag=O5D79_004566;product=type I secretion system permease/ATPase;protein_id=HJH9165953.1;transl_table=11 DALFDJ020000033.1 tpg gene 40735 41898 . + . ID=gene-O5D79_004567;Name=O5D79_004567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004567 DALFDJ020000033.1 Protein Homology CDS 40735 41898 . + 0 ID=cds-HJH9165954.1;Parent=gene-O5D79_004567;Dbxref=NCBI_GP:HJH9165954.1;Name=HJH9165954.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461621.1;locus_tag=O5D79_004567;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=HJH9165954.1;transl_table=11 DALFDJ020000033.1 tpg gene 41970 42332 . + . ID=gene-O5D79_004568;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=O5D79_004568 DALFDJ020000033.1 cmsearch tmRNA 41970 42332 . + . ID=rna-O5D79_004568;Parent=gene-O5D79_004568;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_004568;product=transfer-messenger RNA DALFDJ020000033.1 cmsearch exon 41970 42332 . + . ID=exon-O5D79_004568-1;Parent=rna-O5D79_004568;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_004568;product=transfer-messenger RNA DALFDJ020000033.1 tpg gene 42500 43732 . + . ID=gene-O5D79_004569;Name=O5D79_004569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004569 DALFDJ020000033.1 Protein Homology CDS 42500 43732 . + 0 ID=cds-HJH9165955.1;Parent=gene-O5D79_004569;Dbxref=NCBI_GP:HJH9165955.1;Name=HJH9165955.1;Ontology_term=GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF007246.0;locus_tag=O5D79_004569;product=integrase domain-containing protein;protein_id=HJH9165955.1;transl_table=11 DALFDJ020000033.1 tpg gene 43818 45839 . + . ID=gene-O5D79_004570;Name=O5D79_004570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004570 DALFDJ020000033.1 GeneMarkS-2+ CDS 43818 45839 . + 0 ID=cds-HJH9165956.1;Parent=gene-O5D79_004570;Dbxref=NCBI_GP:HJH9165956.1;Name=HJH9165956.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004570;product=hypothetical protein;protein_id=HJH9165956.1;transl_table=11 DALFDJ020000033.1 tpg gene 46030 46494 . - . ID=gene-O5D79_004571;Name=O5D79_004571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004571 DALFDJ020000033.1 GeneMarkS-2+ CDS 46030 46494 . - 0 ID=cds-HJH9165957.1;Parent=gene-O5D79_004571;Dbxref=NCBI_GP:HJH9165957.1;Name=HJH9165957.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004571;product=hypothetical protein;protein_id=HJH9165957.1;transl_table=11 DALFDJ020000033.1 tpg gene 46496 46732 . - . ID=gene-O5D79_004572;Name=O5D79_004572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004572 DALFDJ020000033.1 GeneMarkS-2+ CDS 46496 46732 . - 0 ID=cds-HJH9165958.1;Parent=gene-O5D79_004572;Dbxref=NCBI_GP:HJH9165958.1;Name=HJH9165958.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004572;product=hypothetical protein;protein_id=HJH9165958.1;transl_table=11 DALFDJ020000033.1 tpg gene 46729 47142 . - . ID=gene-O5D79_004573;Name=O5D79_004573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004573 DALFDJ020000033.1 GeneMarkS-2+ CDS 46729 47142 . - 0 ID=cds-HJH9165959.1;Parent=gene-O5D79_004573;Dbxref=NCBI_GP:HJH9165959.1;Name=HJH9165959.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004573;product=hypothetical protein;protein_id=HJH9165959.1;transl_table=11 DALFDJ020000033.1 tpg gene 47135 47485 . - . ID=gene-O5D79_004574;Name=O5D79_004574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004574 DALFDJ020000033.1 GeneMarkS-2+ CDS 47135 47485 . - 0 ID=cds-HJH9165960.1;Parent=gene-O5D79_004574;Dbxref=NCBI_GP:HJH9165960.1;Name=HJH9165960.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004574;product=hypothetical protein;protein_id=HJH9165960.1;transl_table=11 DALFDJ020000033.1 tpg gene 47475 47810 . - . ID=gene-O5D79_004575;Name=O5D79_004575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004575 DALFDJ020000033.1 GeneMarkS-2+ CDS 47475 47810 . - 0 ID=cds-HJH9165961.1;Parent=gene-O5D79_004575;Dbxref=NCBI_GP:HJH9165961.1;Name=HJH9165961.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004575;product=hypothetical protein;protein_id=HJH9165961.1;transl_table=11 DALFDJ020000033.1 tpg gene 47807 47992 . - . ID=gene-O5D79_004576;Name=O5D79_004576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004576 DALFDJ020000033.1 GeneMarkS-2+ CDS 47807 47992 . - 0 ID=cds-HJH9165962.1;Parent=gene-O5D79_004576;Dbxref=NCBI_GP:HJH9165962.1;Name=HJH9165962.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004576;product=hypothetical protein;protein_id=HJH9165962.1;transl_table=11 DALFDJ020000033.1 tpg gene 48334 49629 . + . ID=gene-O5D79_004577;Name=mobQ;gbkey=Gene;gene=mobQ;gene_biotype=protein_coding;locus_tag=O5D79_004577 DALFDJ020000033.1 Protein Homology CDS 48334 49629 . + 0 ID=cds-HJH9165963.1;Parent=gene-O5D79_004577;Dbxref=NCBI_GP:HJH9165963.1;Name=HJH9165963.1;gbkey=CDS;gene=mobQ;inference=COORDINATES: protein motif:HMM:NF041496.1;locus_tag=O5D79_004577;product=MobQ family relaxase;protein_id=HJH9165963.1;transl_table=11 DALFDJ020000033.1 tpg gene 49992 50486 . + . ID=gene-O5D79_004578;Name=O5D79_004578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004578 DALFDJ020000033.1 Protein Homology CDS 49992 50486 . + 0 ID=cds-HJH9165964.1;Parent=gene-O5D79_004578;Dbxref=NCBI_GP:HJH9165964.1;Name=HJH9165964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001351134.1;locus_tag=O5D79_004578;product=DUF4755 domain-containing protein;protein_id=HJH9165964.1;transl_table=11 DALFDJ020000033.1 tpg gene 50519 50896 . + . ID=gene-O5D79_004579;Name=O5D79_004579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004579 DALFDJ020000033.1 Protein Homology CDS 50519 50896 . + 0 ID=cds-HJH9165965.1;Parent=gene-O5D79_004579;Dbxref=NCBI_GP:HJH9165965.1;Name=HJH9165965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015730192.1;locus_tag=O5D79_004579;product=hypothetical protein;protein_id=HJH9165965.1;transl_table=11 ##sequence-region DALFDJ020000034.1 1 45058 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000034.1 tpg region 1 45058 . + . ID=DALFDJ020000034.1:1..45058;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000034.1 tpg gene 480 2069 . + . ID=gene-O5D79_004580;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=O5D79_004580 DALFDJ020000034.1 Protein Homology CDS 480 2069 . + 0 ID=cds-HJH9165966.1;Parent=gene-O5D79_004580;Dbxref=NCBI_GP:HJH9165966.1;Name=HJH9165966.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=O5D79_004580;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=HJH9165966.1;transl_table=11 DALFDJ020000034.1 tpg gene 2085 3374 . + . ID=gene-O5D79_004581;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=O5D79_004581 DALFDJ020000034.1 Protein Homology CDS 2085 3374 . + 0 ID=cds-HJH9165967.1;Parent=gene-O5D79_004581;Dbxref=NCBI_GP:HJH9165967.1;Name=HJH9165967.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463044.1;locus_tag=O5D79_004581;product=phosphoribosylamine--glycine ligase;protein_id=HJH9165967.1;transl_table=11 DALFDJ020000034.1 tpg gene 3371 4696 . - . ID=gene-O5D79_004582;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=O5D79_004582 DALFDJ020000034.1 Protein Homology CDS 3371 4696 . - 0 ID=cds-HJH9165968.1;Parent=gene-O5D79_004582;Dbxref=NCBI_GP:HJH9165968.1;Name=HJH9165968.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463043.1;locus_tag=O5D79_004582;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=HJH9165968.1;transl_table=11 DALFDJ020000034.1 tpg gene 4702 6099 . - . ID=gene-O5D79_004583;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=O5D79_004583 DALFDJ020000034.1 Protein Homology CDS 4702 6099 . - 0 ID=cds-HJH9165969.1;Parent=gene-O5D79_004583;Dbxref=NCBI_GP:HJH9165969.1;Name=HJH9165969.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463042.1;locus_tag=O5D79_004583;product=two-component system sensor histidine kinase ZraS;protein_id=HJH9165969.1;transl_table=11 DALFDJ020000034.1 tpg gene 6353 6808 . + . ID=gene-O5D79_004584;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=O5D79_004584 DALFDJ020000034.1 Protein Homology CDS 6353 6808 . + 0 ID=cds-HJH9165970.1;Parent=gene-O5D79_004584;Dbxref=NCBI_GP:HJH9165970.1;Name=HJH9165970.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463041.1;locus_tag=O5D79_004584;product=zinc resistance sensor/chaperone ZraP;protein_id=HJH9165970.1;transl_table=11 DALFDJ020000034.1 tpg gene 6850 7542 . - . ID=gene-O5D79_004585;Name=O5D79_004585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004585 DALFDJ020000034.1 Protein Homology CDS 6850 7542 . - 0 ID=cds-HJH9165971.1;Parent=gene-O5D79_004585;Dbxref=NCBI_GP:HJH9165971.1;Name=HJH9165971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463040.1;locus_tag=O5D79_004585;product=DUF1481 domain-containing protein;protein_id=HJH9165971.1;transl_table=11 DALFDJ020000034.1 tpg gene 7554 7826 . - . ID=gene-O5D79_004586;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=O5D79_004586 DALFDJ020000034.1 Protein Homology CDS 7554 7826 . - 0 ID=cds-HJH9165972.1;Parent=gene-O5D79_004586;Dbxref=NCBI_GP:HJH9165972.1;Name=HJH9165972.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=O5D79_004586;product=nucleoid-associated protein HU-alpha;protein_id=HJH9165972.1;transl_table=11 DALFDJ020000034.1 tpg gene 8013 8603 . - . ID=gene-O5D79_004587;Name=O5D79_004587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004587 DALFDJ020000034.1 Protein Homology CDS 8013 8603 . - 0 ID=cds-HJH9165973.1;Parent=gene-O5D79_004587;Dbxref=NCBI_GP:HJH9165973.1;Name=HJH9165973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463038.1;locus_tag=O5D79_004587;product=YjaG family protein;protein_id=HJH9165973.1;transl_table=11 DALFDJ020000034.1 tpg gene 8645 9316 . - . ID=gene-O5D79_004588;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=O5D79_004588 DALFDJ020000034.1 Protein Homology CDS 8645 9316 . - 0 ID=cds-HJH9165974.1;Parent=gene-O5D79_004588;Dbxref=NCBI_GP:HJH9165974.1;Name=HJH9165974.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463037.1;locus_tag=O5D79_004588;product=deoxyribonuclease V;protein_id=HJH9165974.1;transl_table=11 DALFDJ020000034.1 tpg gene 9326 10390 . - . ID=gene-O5D79_004589;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=O5D79_004589 DALFDJ020000034.1 Protein Homology CDS 9326 10390 . - 0 ID=cds-HJH9165975.1;Parent=gene-O5D79_004589;Dbxref=NCBI_GP:HJH9165975.1;Name=HJH9165975.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463036.2;locus_tag=O5D79_004589;product=uroporphyrinogen decarboxylase;protein_id=HJH9165975.1;transl_table=11 DALFDJ020000034.1 tpg gene 10431 11204 . - . ID=gene-O5D79_004590;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=O5D79_004590 DALFDJ020000034.1 Protein Homology CDS 10431 11204 . - 0 ID=cds-HJH9165976.1;Parent=gene-O5D79_004590;Dbxref=NCBI_GP:HJH9165976.1;Name=HJH9165976.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463035.1;locus_tag=O5D79_004590;product=NAD(+) diphosphatase;protein_id=HJH9165976.1;transl_table=11 DALFDJ020000034.1 tpg gene 11297 11785 . + . ID=gene-O5D79_004591;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=O5D79_004591 DALFDJ020000034.1 Protein Homology CDS 11297 11785 . + 0 ID=cds-HJH9165977.1;Parent=gene-O5D79_004591;Dbxref=NCBI_GP:HJH9165977.1;Name=HJH9165977.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463034.1;locus_tag=O5D79_004591;product=sigma D regulator;protein_id=HJH9165977.1;transl_table=11 DALFDJ020000034.1 tpg gene 12149 14044 . + . ID=gene-O5D79_004592;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=O5D79_004592 DALFDJ020000034.1 Protein Homology CDS 12149 14044 . + 0 ID=cds-HJH9165978.1;Parent=gene-O5D79_004592;Dbxref=NCBI_GP:HJH9165978.1;Name=HJH9165978.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001541272.1;locus_tag=O5D79_004592;product=phosphomethylpyrimidine synthase ThiC;protein_id=HJH9165978.1;transl_table=11 DALFDJ020000034.1 tpg gene 14044 14679 . + . ID=gene-O5D79_004593;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=O5D79_004593 DALFDJ020000034.1 Protein Homology CDS 14044 14679 . + 0 ID=cds-HJH9165979.1;Parent=gene-O5D79_004593;Dbxref=NCBI_GP:HJH9165979.1;Name=HJH9165979.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463032.1;locus_tag=O5D79_004593;product=thiamine phosphate synthase;protein_id=HJH9165979.1;transl_table=11 DALFDJ020000034.1 tpg gene 14672 15430 . + . ID=gene-O5D79_004594;Name=O5D79_004594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004594 DALFDJ020000034.1 Protein Homology CDS 14672 15430 . + 0 ID=cds-HJH9165980.1;Parent=gene-O5D79_004594;Dbxref=NCBI_GP:HJH9165980.1;Name=HJH9165980.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463031.1;locus_tag=O5D79_004594;product=HesA/MoeB/ThiF family protein;protein_id=HJH9165980.1;transl_table=11 DALFDJ020000034.1 tpg gene 15411 15611 . + . ID=gene-O5D79_004595;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=O5D79_004595 DALFDJ020000034.1 Protein Homology CDS 15411 15611 . + 0 ID=cds-HJH9165981.1;Parent=gene-O5D79_004595;Dbxref=NCBI_GP:HJH9165981.1;Name=HJH9165981.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463030.1;locus_tag=O5D79_004595;product=sulfur carrier protein ThiS;protein_id=HJH9165981.1;transl_table=11 DALFDJ020000034.1 tpg gene 15613 16383 . + . ID=gene-O5D79_004596;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=O5D79_004596 DALFDJ020000034.1 Protein Homology CDS 15613 16383 . + 0 ID=cds-HJH9165982.1;Parent=gene-O5D79_004596;Dbxref=NCBI_GP:HJH9165982.1;Name=HJH9165982.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463029.1;locus_tag=O5D79_004596;product=thiazole synthase;protein_id=HJH9165982.1;transl_table=11 DALFDJ020000034.1 tpg gene 16380 17513 . + . ID=gene-O5D79_004597;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=O5D79_004597 DALFDJ020000034.1 Protein Homology CDS 16380 17513 . + 0 ID=cds-HJH9165983.1;Parent=gene-O5D79_004597;Dbxref=NCBI_GP:HJH9165983.1;Name=HJH9165983.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463028.1;locus_tag=O5D79_004597;product=2-iminoacetate synthase ThiH;protein_id=HJH9165983.1;transl_table=11 DALFDJ020000034.1 tpg gene 17735 18763 . - . ID=gene-O5D79_004598;Name=O5D79_004598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004598 DALFDJ020000034.1 Protein Homology CDS 17735 18763 . - 0 ID=cds-HJH9165984.1;Parent=gene-O5D79_004598;Dbxref=NCBI_GP:HJH9165984.1;Name=HJH9165984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400600.1;locus_tag=O5D79_004598;product=type III secretion system effector arginine glycosyltransferase SseK1;protein_id=HJH9165984.1;transl_table=11 DALFDJ020000034.1 tpg gene 19144 19488 . + . ID=gene-O5D79_004599;Name=O5D79_004599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004599 DALFDJ020000034.1 Protein Homology CDS 19144 19488 . + 0 ID=cds-HJH9165985.1;Parent=gene-O5D79_004599;Dbxref=NCBI_GP:HJH9165985.1;Name=HJH9165985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463025.1;locus_tag=O5D79_004599;product=cytoplasmic protein;protein_id=HJH9165985.1;transl_table=11 DALFDJ020000034.1 tpg gene 19490 19816 . - . ID=gene-O5D79_004600;Name=O5D79_004600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004600 DALFDJ020000034.1 Protein Homology CDS 19490 19816 . - 0 ID=cds-HJH9165986.1;Parent=gene-O5D79_004600;Dbxref=NCBI_GP:HJH9165986.1;Name=HJH9165986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015675457.1;locus_tag=O5D79_004600;product=hypothetical protein;protein_id=HJH9165986.1;transl_table=11 DALFDJ020000034.1 tpg gene 19858 24081 . - . ID=gene-O5D79_004601;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=O5D79_004601 DALFDJ020000034.1 Protein Homology CDS 19858 24081 . - 0 ID=cds-HJH9165987.1;Parent=gene-O5D79_004601;Dbxref=NCBI_GP:HJH9165987.1;Name=HJH9165987.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463023.1;locus_tag=O5D79_004601;product=DNA-directed RNA polymerase subunit beta';protein_id=HJH9165987.1;transl_table=11 DALFDJ020000034.1 tpg gene 24158 28186 . - . ID=gene-O5D79_004602;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=O5D79_004602 DALFDJ020000034.1 Protein Homology CDS 24158 28186 . - 0 ID=cds-HJH9165988.1;Parent=gene-O5D79_004602;Dbxref=NCBI_GP:HJH9165988.1;Name=HJH9165988.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=O5D79_004602;product=DNA-directed RNA polymerase subunit beta;protein_id=HJH9165988.1;transl_table=11 DALFDJ020000034.1 tpg gene 28504 28869 . - . ID=gene-O5D79_004603;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=O5D79_004603 DALFDJ020000034.1 Protein Homology CDS 28504 28869 . - 0 ID=cds-HJH9165989.1;Parent=gene-O5D79_004603;Dbxref=NCBI_GP:HJH9165989.1;Name=HJH9165989.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=O5D79_004603;product=50S ribosomal protein L7/L12;protein_id=HJH9165989.1;transl_table=11 DALFDJ020000034.1 tpg gene 28936 29433 . - . ID=gene-O5D79_004604;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=O5D79_004604 DALFDJ020000034.1 Protein Homology CDS 28936 29433 . - 0 ID=cds-HJH9165990.1;Parent=gene-O5D79_004604;Dbxref=NCBI_GP:HJH9165990.1;Name=HJH9165990.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=O5D79_004604;product=50S ribosomal protein L10;protein_id=HJH9165990.1;transl_table=11 DALFDJ020000034.1 tpg gene 29853 30557 . - . ID=gene-O5D79_004605;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=O5D79_004605 DALFDJ020000034.1 Protein Homology CDS 29853 30557 . - 0 ID=cds-HJH9165991.1;Parent=gene-O5D79_004605;Dbxref=NCBI_GP:HJH9165991.1;Name=HJH9165991.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463019.1;locus_tag=O5D79_004605;product=50S ribosomal protein L1;protein_id=HJH9165991.1;transl_table=11 DALFDJ020000034.1 tpg gene 30561 30989 . - . ID=gene-O5D79_004606;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=O5D79_004606 DALFDJ020000034.1 Protein Homology CDS 30561 30989 . - 0 ID=cds-HJH9165992.1;Parent=gene-O5D79_004606;Dbxref=NCBI_GP:HJH9165992.1;Name=HJH9165992.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=O5D79_004606;product=50S ribosomal protein L11;protein_id=HJH9165992.1;transl_table=11 DALFDJ020000034.1 tpg gene 31147 31692 . - . ID=gene-O5D79_004607;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=O5D79_004607 DALFDJ020000034.1 Protein Homology CDS 31147 31692 . - 0 ID=cds-HJH9165993.1;Parent=gene-O5D79_004607;Dbxref=NCBI_GP:HJH9165993.1;Name=HJH9165993.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=O5D79_004607;product=transcription termination/antitermination protein NusG;protein_id=HJH9165993.1;transl_table=11 DALFDJ020000034.1 tpg gene 31694 32077 . - . ID=gene-O5D79_004608;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=O5D79_004608 DALFDJ020000034.1 Protein Homology CDS 31694 32077 . - 0 ID=cds-HJH9165994.1;Parent=gene-O5D79_004608;Dbxref=NCBI_GP:HJH9165994.1;Name=HJH9165994.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=O5D79_004608;product=preprotein translocase subunit SecE;protein_id=HJH9165994.1;transl_table=11 DALFDJ020000034.1 tpg gene 32307 33491 . - . ID=gene-O5D79_004609;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=O5D79_004609 DALFDJ020000034.1 Protein Homology CDS 32307 33491 . - 0 ID=cds-HJH9165995.1;Parent=gene-O5D79_004609;Dbxref=NCBI_GP:HJH9165995.1;Name=HJH9165995.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=O5D79_004609;product=elongation factor Tu;protein_id=HJH9165995.1;transl_table=11 DALFDJ020000034.1 tpg gene 33607 33682 . - . ID=gene-O5D79_004610;Name=O5D79_004610;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_004610 DALFDJ020000034.1 tRNAscan-SE tRNA 33607 33682 . - . ID=rna-O5D79_004610;Parent=gene-O5D79_004610;anticodon=(pos:complement(33647..33649));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004610;product=tRNA-Thr DALFDJ020000034.1 tRNAscan-SE exon 33607 33682 . - . ID=exon-O5D79_004610-1;Parent=rna-O5D79_004610;anticodon=(pos:complement(33647..33649));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004610;product=tRNA-Thr DALFDJ020000034.1 tpg gene 33689 33763 . - . ID=gene-O5D79_004611;Name=O5D79_004611;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_004611 DALFDJ020000034.1 tRNAscan-SE tRNA 33689 33763 . - . ID=rna-O5D79_004611;Parent=gene-O5D79_004611;anticodon=(pos:complement(33728..33730));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004611;product=tRNA-Gly DALFDJ020000034.1 tRNAscan-SE exon 33689 33763 . - . ID=exon-O5D79_004611-1;Parent=rna-O5D79_004611;anticodon=(pos:complement(33728..33730));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004611;product=tRNA-Gly DALFDJ020000034.1 tpg gene 33880 33964 . - . ID=gene-O5D79_004612;Name=O5D79_004612;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_004612 DALFDJ020000034.1 tRNAscan-SE tRNA 33880 33964 . - . ID=rna-O5D79_004612;Parent=gene-O5D79_004612;anticodon=(pos:complement(33928..33930));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004612;product=tRNA-Tyr DALFDJ020000034.1 tRNAscan-SE exon 33880 33964 . - . ID=exon-O5D79_004612-1;Parent=rna-O5D79_004612;anticodon=(pos:complement(33928..33930));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004612;product=tRNA-Tyr DALFDJ020000034.1 tpg gene 33973 34048 . - . ID=gene-O5D79_004613;Name=O5D79_004613;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_004613 DALFDJ020000034.1 tRNAscan-SE tRNA 33973 34048 . - . ID=rna-O5D79_004613;Parent=gene-O5D79_004613;anticodon=(pos:complement(34013..34015));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004613;product=tRNA-Thr DALFDJ020000034.1 tRNAscan-SE exon 33973 34048 . - . ID=exon-O5D79_004613-1;Parent=rna-O5D79_004613;anticodon=(pos:complement(34013..34015));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004613;product=tRNA-Thr DALFDJ020000034.1 tpg gene 34068 34241 . + . ID=gene-O5D79_004614;Name=O5D79_004614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004614 DALFDJ020000034.1 Protein Homology CDS 34068 34241 . + 0 ID=cds-HJH9165996.1;Parent=gene-O5D79_004614;Dbxref=NCBI_GP:HJH9165996.1;Name=HJH9165996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463014.1;locus_tag=O5D79_004614;product=hypothetical protein;protein_id=HJH9165996.1;transl_table=11 DALFDJ020000034.1 tpg gene 34450 35400 . + . ID=gene-O5D79_004615;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=O5D79_004615 DALFDJ020000034.1 Protein Homology CDS 34450 35400 . + 0 ID=cds-HJH9165997.1;Parent=gene-O5D79_004615;Dbxref=NCBI_GP:HJH9165997.1;Name=HJH9165997.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=O5D79_004615;product=type I pantothenate kinase;protein_id=HJH9165997.1;transl_table=11 DALFDJ020000034.1 tpg gene 35435 36397 . - . ID=gene-O5D79_004616;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=O5D79_004616 DALFDJ020000034.1 Protein Homology CDS 35435 36397 . - 0 ID=cds-HJH9165998.1;Parent=gene-O5D79_004616;Dbxref=NCBI_GP:HJH9165998.1;Name=HJH9165998.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463012.1;locus_tag=O5D79_004616;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=HJH9165998.1;transl_table=11 DALFDJ020000034.1 tpg gene 36394 37422 . - . ID=gene-O5D79_004617;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=O5D79_004617 DALFDJ020000034.1 Protein Homology CDS 36394 37422 . - 0 ID=cds-HJH9165999.1;Parent=gene-O5D79_004617;Dbxref=NCBI_GP:HJH9165999.1;Name=HJH9165999.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463011.1;locus_tag=O5D79_004617;product=UDP-N-acetylmuramate dehydrogenase;protein_id=HJH9165999.1;transl_table=11 DALFDJ020000034.1 tpg gene 37818 38723 . - . ID=gene-O5D79_004618;Name=O5D79_004618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004618 DALFDJ020000034.1 Protein Homology CDS 37818 38723 . - 0 ID=cds-HJH9166000.1;Parent=gene-O5D79_004618;Dbxref=NCBI_GP:HJH9166000.1;Name=HJH9166000.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: protein motif:HMM:NF012904.6;locus_tag=O5D79_004618;product=dihydrodipicolinate synthase family protein;protein_id=HJH9166000.1;transl_table=11 DALFDJ020000034.1 tpg gene 38711 39679 . - . ID=gene-O5D79_004619;Name=O5D79_004619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004619 DALFDJ020000034.1 Protein Homology CDS 38711 39679 . - 0 ID=cds-HJH9166001.1;Parent=gene-O5D79_004619;Dbxref=NCBI_GP:HJH9166001.1;Name=HJH9166001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001166751.1;locus_tag=O5D79_004619;product=2-keto-3-deoxygluconate permease;protein_id=HJH9166001.1;transl_table=11 DALFDJ020000034.1 tpg gene 39717 40892 . - . ID=gene-O5D79_004620;Name=O5D79_004620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004620 DALFDJ020000034.1 Protein Homology CDS 39717 40892 . - 0 ID=cds-HJH9166002.1;Parent=gene-O5D79_004620;Dbxref=NCBI_GP:HJH9166002.1;Name=HJH9166002.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: protein motif:HMM:NF045169.3;locus_tag=O5D79_004620;product=UxaA family hydrolase;protein_id=HJH9166002.1;transl_table=11 DALFDJ020000034.1 tpg gene 40919 41185 . - . ID=gene-O5D79_004621;Name=O5D79_004621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004621 DALFDJ020000034.1 Protein Homology CDS 40919 41185 . - 0 ID=cds-HJH9166003.1;Parent=gene-O5D79_004621;Dbxref=NCBI_GP:HJH9166003.1;Name=HJH9166003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001663244.1;locus_tag=O5D79_004621;product=UxaA family hydrolase;protein_id=HJH9166003.1;transl_table=11 DALFDJ020000034.1 tpg gene 41271 42281 . - . ID=gene-O5D79_004622;Name=dmpG;gbkey=Gene;gene=dmpG;gene_biotype=protein_coding;locus_tag=O5D79_004622 DALFDJ020000034.1 Protein Homology CDS 41271 42281 . - 0 ID=cds-HJH9166004.1;Parent=gene-O5D79_004622;Dbxref=NCBI_GP:HJH9166004.1;Name=HJH9166004.1;Ontology_term=GO:0009056,GO:0008701;gbkey=CDS;gene=dmpG;go_function=4-hydroxy-2-oxovalerate aldolase activity|0008701||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932712.1;locus_tag=O5D79_004622;product=4-hydroxy-2-oxovalerate aldolase;protein_id=HJH9166004.1;transl_table=11 DALFDJ020000034.1 tpg gene 42284 43156 . - . ID=gene-O5D79_004623;Name=O5D79_004623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004623 DALFDJ020000034.1 Protein Homology CDS 42284 43156 . - 0 ID=cds-HJH9166005.1;Parent=gene-O5D79_004623;Dbxref=NCBI_GP:HJH9166005.1;Name=HJH9166005.1;Ontology_term=GO:0009056,GO:0008774;gbkey=CDS;go_function=acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000521142.1;locus_tag=O5D79_004623;product=acetaldehyde dehydrogenase (acetylating);protein_id=HJH9166005.1;transl_table=11 DALFDJ020000034.1 tpg gene 43274 44068 . + . ID=gene-O5D79_004624;Name=O5D79_004624;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004624 DALFDJ020000034.1 Protein Homology CDS 43274 44068 . + 0 ID=cds-HJH9166006.1;Parent=gene-O5D79_004624;Dbxref=NCBI_GP:HJH9166006.1;Name=HJH9166006.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000246207.1;locus_tag=O5D79_004624;product=IclR family transcriptional regulator;protein_id=HJH9166006.1;transl_table=11 DALFDJ020000034.1 tpg gene 44681 44796 . - . ID=gene-O5D79_004625;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=O5D79_004625 DALFDJ020000034.1 cmsearch rRNA 44681 44796 . - . ID=rna-O5D79_004625;Parent=gene-O5D79_004625;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_004625;product=5S ribosomal RNA DALFDJ020000034.1 cmsearch exon 44681 44796 . - . ID=exon-O5D79_004625-1;Parent=rna-O5D79_004625;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_004625;product=5S ribosomal RNA DALFDJ020000034.1 tpg gene 44890 45058 . - . ID=gene-O5D79_004626;Name=O5D79_004626;end_range=45058,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=O5D79_004626;partial=true DALFDJ020000034.1 cmsearch rRNA 44890 45058 . - . ID=rna-O5D79_004626;Parent=gene-O5D79_004626;Dbxref=RFAM:RF02541;end_range=45058,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_004626;partial=true;product=23S ribosomal RNA DALFDJ020000034.1 cmsearch exon 44890 45058 . - . ID=exon-O5D79_004626-1;Parent=rna-O5D79_004626;Dbxref=RFAM:RF02541;end_range=45058,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_004626;partial=true;product=23S ribosomal RNA ##sequence-region DALFDJ020000035.1 1 42755 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000035.1 tpg region 1 42755 . + . ID=DALFDJ020000035.1:1..42755;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000035.1 tpg gene 3 194 . + . ID=gene-O5D79_004627;Name=O5D79_004627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004627 DALFDJ020000035.1 Protein Homology CDS 3 194 . + 0 ID=cds-HJH9166007.1;Parent=gene-O5D79_004627;Dbxref=NCBI_GP:HJH9166007.1;Name=HJH9166007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000605647.1;locus_tag=O5D79_004627;product=DUF2534 family protein;protein_id=HJH9166007.1;transl_table=11 DALFDJ020000035.1 tpg gene 364 1008 . - . ID=gene-O5D79_004628;Name=O5D79_004628;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004628 DALFDJ020000035.1 Protein Homology CDS 364 1008 . - 0 ID=cds-HJH9166008.1;Parent=gene-O5D79_004628;Dbxref=NCBI_GP:HJH9166008.1;Name=HJH9166008.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837326.1;locus_tag=O5D79_004628;product=IbrB-like domain-containing protein;protein_id=HJH9166008.1;transl_table=11 DALFDJ020000035.1 tpg gene 993 2228 . - . ID=gene-O5D79_004629;Name=O5D79_004629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004629 DALFDJ020000035.1 Protein Homology CDS 993 2228 . - 0 ID=cds-HJH9166009.1;Parent=gene-O5D79_004629;Dbxref=NCBI_GP:HJH9166009.1;Name=HJH9166009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750847.1;locus_tag=O5D79_004629;product=phosphoadenosine phosphosulfate reductase;protein_id=HJH9166009.1;transl_table=11 DALFDJ020000035.1 tpg gene 3566 4303 . - . ID=gene-O5D79_004630;Name=O5D79_004630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004630 DALFDJ020000035.1 Protein Homology CDS 3566 4303 . - 0 ID=cds-HJH9166010.1;Parent=gene-O5D79_004630;Dbxref=NCBI_GP:HJH9166010.1;Name=HJH9166010.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF013696.6;locus_tag=O5D79_004630;product=M20/M25/M40 family metallo-hydrolase;protein_id=HJH9166010.1;transl_table=11 DALFDJ020000035.1 tpg gene 4577 5539 . - . ID=gene-O5D79_004631;Name=O5D79_004631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004631 DALFDJ020000035.1 Protein Homology CDS 4577 5539 . - 0 ID=cds-HJH9166011.1;Parent=gene-O5D79_004631;Dbxref=NCBI_GP:HJH9166011.1;Name=HJH9166011.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673306.1;locus_tag=O5D79_004631;product=sugar-binding transcriptional regulator;protein_id=HJH9166011.1;transl_table=11 DALFDJ020000035.1 tpg gene 5669 6430 . - . ID=gene-O5D79_004632;Name=O5D79_004632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004632 DALFDJ020000035.1 Protein Homology CDS 5669 6430 . - 0 ID=cds-HJH9166012.1;Parent=gene-O5D79_004632;Dbxref=NCBI_GP:HJH9166012.1;Name=HJH9166012.1;Ontology_term=GO:0005975,GO:0006094,GO:0006096,GO:0004807;gbkey=CDS;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=carbohydrate metabolic process|0005975||IEA,gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463350.1;locus_tag=O5D79_004632;product=triose-phosphate isomerase family protein;protein_id=HJH9166012.1;transl_table=11 DALFDJ020000035.1 tpg gene 6421 8178 . - . ID=gene-O5D79_004633;Name=O5D79_004633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004633 DALFDJ020000035.1 Protein Homology CDS 6421 8178 . - 0 ID=cds-HJH9166013.1;Parent=gene-O5D79_004633;Dbxref=NCBI_GP:HJH9166013.1;Name=HJH9166013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904735.1;locus_tag=O5D79_004633;product=dihydroxyacetone kinase family protein;protein_id=HJH9166013.1;transl_table=11 DALFDJ020000035.1 tpg gene 8495 8965 . + . ID=gene-O5D79_004634;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=O5D79_004634 DALFDJ020000035.1 Protein Homology CDS 8495 8965 . + 0 ID=cds-HJH9166014.1;Parent=gene-O5D79_004634;Dbxref=NCBI_GP:HJH9166014.1;Name=HJH9166014.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiB;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904736.1;locus_tag=O5D79_004634;product=ribose 5-phosphate isomerase B;protein_id=HJH9166014.1;transl_table=11 DALFDJ020000035.1 tpg gene 8978 9958 . + . ID=gene-O5D79_004635;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=O5D79_004635 DALFDJ020000035.1 Protein Homology CDS 8978 9958 . + 0 ID=cds-HJH9166015.1;Parent=gene-O5D79_004635;Dbxref=NCBI_GP:HJH9166015.1;Name=HJH9166015.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463359.1;locus_tag=O5D79_004635;product=transaldolase;protein_id=HJH9166015.1;transl_table=11 DALFDJ020000035.1 tpg gene 9945 11954 . + . ID=gene-O5D79_004636;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=O5D79_004636 DALFDJ020000035.1 Protein Homology CDS 9945 11954 . + 0 ID=cds-HJH9166016.1;Parent=gene-O5D79_004636;Dbxref=NCBI_GP:HJH9166016.1;Name=HJH9166016.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461992.1;locus_tag=O5D79_004636;product=transketolase;protein_id=HJH9166016.1;transl_table=11 DALFDJ020000035.1 tpg gene 12098 13408 . + . ID=gene-O5D79_004637;Name=O5D79_004637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004637 DALFDJ020000035.1 Protein Homology CDS 12098 13408 . + 0 ID=cds-HJH9166017.1;Parent=gene-O5D79_004637;Dbxref=NCBI_GP:HJH9166017.1;Name=HJH9166017.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007885903.1;locus_tag=O5D79_004637;product=MFS transporter;protein_id=HJH9166017.1;transl_table=11 DALFDJ020000035.1 tpg gene 13418 14455 . + . ID=gene-O5D79_004638;Name=O5D79_004638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004638 DALFDJ020000035.1 Protein Homology CDS 13418 14455 . + 0 ID=cds-HJH9166018.1;Parent=gene-O5D79_004638;Dbxref=NCBI_GP:HJH9166018.1;Name=HJH9166018.1;Ontology_term=GO:0008615,GO:0042823,GO:0000287,GO:0008270,GO:0050570,GO:0050897,GO:0051287,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,zinc ion binding|0008270||IEA,4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA,cobalt ion binding|0050897||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904738.1;locus_tag=O5D79_004638;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=HJH9166018.1;transl_table=11 DALFDJ020000035.1 tpg gene 14541 15833 . + . ID=gene-O5D79_004639;Name=O5D79_004639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004639 DALFDJ020000035.1 Protein Homology CDS 14541 15833 . + 0 ID=cds-HJH9166019.1;Parent=gene-O5D79_004639;Dbxref=NCBI_GP:HJH9166019.1;Name=HJH9166019.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.6;locus_tag=O5D79_004639;product=MFS transporter;protein_id=HJH9166019.1;transl_table=11 DALFDJ020000035.1 tpg gene 15815 16762 . + . ID=gene-O5D79_004640;Name=O5D79_004640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004640 DALFDJ020000035.1 Protein Homology CDS 15815 16762 . + 0 ID=cds-HJH9166020.1;Parent=gene-O5D79_004640;Dbxref=NCBI_GP:HJH9166020.1;Name=HJH9166020.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007885906.1;locus_tag=O5D79_004640;product=amidohydrolase family protein;protein_id=HJH9166020.1;transl_table=11 DALFDJ020000035.1 tpg gene 16759 17595 . + . ID=gene-O5D79_004641;Name=O5D79_004641;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004641 DALFDJ020000035.1 Protein Homology CDS 16759 17595 . + 0 ID=cds-HJH9166021.1;Parent=gene-O5D79_004641;Dbxref=NCBI_GP:HJH9166021.1;Name=HJH9166021.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: protein motif:HMM:NF013429.6;locus_tag=O5D79_004641;product=sugar phosphate isomerase/epimerase family protein;protein_id=HJH9166021.1;transl_table=11 DALFDJ020000035.1 tpg gene 17908 18747 . - . ID=gene-O5D79_004642;Name=O5D79_004642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004642 DALFDJ020000035.1 Protein Homology CDS 17908 18747 . - 0 ID=cds-HJH9166022.1;Parent=gene-O5D79_004642;Dbxref=NCBI_GP:HJH9166022.1;Name=HJH9166022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006317665.1;locus_tag=O5D79_004642;product=hypothetical protein;protein_id=HJH9166022.1;transl_table=11 DALFDJ020000035.1 tpg gene 18864 19070 . - . ID=gene-O5D79_004643;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=O5D79_004643 DALFDJ020000035.1 Protein Homology CDS 18864 19070 . - 0 ID=cds-HJH9166023.1;Parent=gene-O5D79_004643;Dbxref=NCBI_GP:HJH9166023.1;Name=HJH9166023.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000838015.1;locus_tag=O5D79_004643;product=hemolysin expression modulator Hha;protein_id=HJH9166023.1;transl_table=11 DALFDJ020000035.1 tpg gene 19193 19540 . - . ID=gene-O5D79_004644;Name=O5D79_004644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004644 DALFDJ020000035.1 Protein Homology CDS 19193 19540 . - 0 ID=cds-HJH9166024.1;Parent=gene-O5D79_004644;Dbxref=NCBI_GP:HJH9166024.1;Name=HJH9166024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750853.1;locus_tag=O5D79_004644;product=hypothetical protein;protein_id=HJH9166024.1;transl_table=11 DALFDJ020000035.1 tpg gene 19534 19890 . - . ID=gene-O5D79_004645;Name=O5D79_004645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004645 DALFDJ020000035.1 Protein Homology CDS 19534 19890 . - 0 ID=cds-HJH9166025.1;Parent=gene-O5D79_004645;Dbxref=NCBI_GP:HJH9166025.1;Name=HJH9166025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750854.1;locus_tag=O5D79_004645;product=PerC family transcriptional regulator;protein_id=HJH9166025.1;transl_table=11 DALFDJ020000035.1 tpg gene 19929 20273 . - . ID=gene-O5D79_004646;Name=O5D79_004646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004646 DALFDJ020000035.1 Protein Homology CDS 19929 20273 . - 0 ID=cds-HJH9166026.1;Parent=gene-O5D79_004646;Dbxref=NCBI_GP:HJH9166026.1;Name=HJH9166026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000555104.1;locus_tag=O5D79_004646;product=hypothetical protein;protein_id=HJH9166026.1;transl_table=11 DALFDJ020000035.1 tpg gene 20484 21299 . - . ID=gene-O5D79_004647;Name=O5D79_004647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004647 DALFDJ020000035.1 Protein Homology CDS 20484 21299 . - 0 ID=cds-HJH9166027.1;Parent=gene-O5D79_004647;Dbxref=NCBI_GP:HJH9166027.1;Name=HJH9166027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750855.1;locus_tag=O5D79_004647;product=transcriptional regulator;protein_id=HJH9166027.1;transl_table=11 DALFDJ020000035.1 tpg gene 21286 21789 . - . ID=gene-O5D79_004648;Name=O5D79_004648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004648 DALFDJ020000035.1 Protein Homology CDS 21286 21789 . - 0 ID=cds-HJH9166028.1;Parent=gene-O5D79_004648;Dbxref=NCBI_GP:HJH9166028.1;Name=HJH9166028.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006777639.1;locus_tag=O5D79_004648;product=CaiF/GrlA family transcriptional regulator;protein_id=HJH9166028.1;transl_table=11 DALFDJ020000035.1 tpg gene 21885 22946 . - . ID=gene-O5D79_004649;Name=O5D79_004649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004649 DALFDJ020000035.1 Protein Homology CDS 21885 22946 . - 0 ID=cds-HJH9166029.1;Parent=gene-O5D79_004649;Dbxref=NCBI_GP:HJH9166029.1;Name=HJH9166029.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147761.1;locus_tag=O5D79_004649;product=fimbrial protein;protein_id=HJH9166029.1;transl_table=11 DALFDJ020000035.1 tpg gene 22943 23686 . - . ID=gene-O5D79_004650;Name=stdC;gbkey=Gene;gene=stdC;gene_biotype=protein_coding;locus_tag=O5D79_004650 DALFDJ020000035.1 Protein Homology CDS 22943 23686 . - 0 ID=cds-HJH9166030.1;Parent=gene-O5D79_004650;Dbxref=NCBI_GP:HJH9166030.1;Name=HJH9166030.1;gbkey=CDS;gene=stdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461944.1;locus_tag=O5D79_004650;product=fimbrial biogenesis chaperone StdC;protein_id=HJH9166030.1;transl_table=11 DALFDJ020000035.1 tpg gene 23727 26216 . - . ID=gene-O5D79_004651;Name=stdB;gbkey=Gene;gene=stdB;gene_biotype=protein_coding;locus_tag=O5D79_004651 DALFDJ020000035.1 Protein Homology CDS 23727 26216 . - 0 ID=cds-HJH9166031.1;Parent=gene-O5D79_004651;Dbxref=NCBI_GP:HJH9166031.1;Name=HJH9166031.1;gbkey=CDS;gene=stdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461945.1;locus_tag=O5D79_004651;product=fimbrial outer membrane usher protein StdB;protein_id=HJH9166031.1;transl_table=11 DALFDJ020000035.1 tpg gene 26336 26929 . - . ID=gene-O5D79_004652;Name=O5D79_004652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004652 DALFDJ020000035.1 Protein Homology CDS 26336 26929 . - 0 ID=cds-HJH9166032.1;Parent=gene-O5D79_004652;Dbxref=NCBI_GP:HJH9166032.1;Name=HJH9166032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001244636.1;locus_tag=O5D79_004652;product=fimbrial protein;protein_id=HJH9166032.1;transl_table=11 DALFDJ020000035.1 tpg gene 27736 28854 . - . ID=gene-O5D79_004653;Name=O5D79_004653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004653 DALFDJ020000035.1 Protein Homology CDS 27736 28854 . - 0 ID=cds-HJH9166033.1;Parent=gene-O5D79_004653;Dbxref=NCBI_GP:HJH9166033.1;Name=HJH9166033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687732.1;locus_tag=O5D79_004653;product=DUF4056 domain-containing protein;protein_id=HJH9166033.1;transl_table=11 DALFDJ020000035.1 tpg gene 28863 29987 . - . ID=gene-O5D79_004654;Name=O5D79_004654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004654 DALFDJ020000035.1 Protein Homology CDS 28863 29987 . - 0 ID=cds-HJH9166034.1;Parent=gene-O5D79_004654;Dbxref=NCBI_GP:HJH9166034.1;Name=HJH9166034.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750412.1;locus_tag=O5D79_004654;product=BamA/TamA family outer membrane protein;protein_id=HJH9166034.1;transl_table=11 DALFDJ020000035.1 tpg gene 29987 30994 . - . ID=gene-O5D79_004655;Name=O5D79_004655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004655 DALFDJ020000035.1 Protein Homology CDS 29987 30994 . - 0 ID=cds-HJH9166035.1;Parent=gene-O5D79_004655;Dbxref=NCBI_GP:HJH9166035.1;Name=HJH9166035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528257.1;locus_tag=O5D79_004655;product=hypothetical protein;protein_id=HJH9166035.1;transl_table=11 DALFDJ020000035.1 tpg gene 31425 31784 . - . ID=gene-O5D79_004656;Name=O5D79_004656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004656 DALFDJ020000035.1 GeneMarkS-2+ CDS 31425 31784 . - 0 ID=cds-HJH9166036.1;Parent=gene-O5D79_004656;Dbxref=NCBI_GP:HJH9166036.1;Name=HJH9166036.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004656;product=hypothetical protein;protein_id=HJH9166036.1;transl_table=11 DALFDJ020000035.1 tpg gene 31785 32096 . - . ID=gene-O5D79_004657;Name=O5D79_004657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004657 DALFDJ020000035.1 GeneMarkS-2+ CDS 31785 32096 . - 0 ID=cds-HJH9166037.1;Parent=gene-O5D79_004657;Dbxref=NCBI_GP:HJH9166037.1;Name=HJH9166037.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004657;product=hypothetical protein;protein_id=HJH9166037.1;transl_table=11 DALFDJ020000035.1 tpg gene 32098 32619 . - . ID=gene-O5D79_004658;Name=O5D79_004658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004658 DALFDJ020000035.1 GeneMarkS-2+ CDS 32098 32619 . - 0 ID=cds-HJH9166038.1;Parent=gene-O5D79_004658;Dbxref=NCBI_GP:HJH9166038.1;Name=HJH9166038.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004658;product=hypothetical protein;protein_id=HJH9166038.1;transl_table=11 DALFDJ020000035.1 tpg gene 32775 33134 . - . ID=gene-O5D79_004659;Name=O5D79_004659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004659 DALFDJ020000035.1 GeneMarkS-2+ CDS 32775 33134 . - 0 ID=cds-HJH9166039.1;Parent=gene-O5D79_004659;Dbxref=NCBI_GP:HJH9166039.1;Name=HJH9166039.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004659;product=hypothetical protein;protein_id=HJH9166039.1;transl_table=11 DALFDJ020000035.1 tpg gene 33884 34252 . - . ID=gene-O5D79_004660;Name=O5D79_004660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004660 DALFDJ020000035.1 Protein Homology CDS 33884 34252 . - 0 ID=cds-HJH9166040.1;Parent=gene-O5D79_004660;Dbxref=NCBI_GP:HJH9166040.1;Name=HJH9166040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750419.1;locus_tag=O5D79_004660;product=hypothetical protein;protein_id=HJH9166040.1;transl_table=11 DALFDJ020000035.1 tpg gene 34693 35094 . - . ID=gene-O5D79_004661;Name=O5D79_004661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004661 DALFDJ020000035.1 Protein Homology CDS 34693 35094 . - 0 ID=cds-HJH9166041.1;Parent=gene-O5D79_004661;Dbxref=NCBI_GP:HJH9166041.1;Name=HJH9166041.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018214.6;locus_tag=O5D79_004661;product=DUF1090 domain-containing protein;protein_id=HJH9166041.1;transl_table=11 DALFDJ020000035.1 tpg gene 35613 36383 . - . ID=gene-O5D79_004662;Name=O5D79_004662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004662 DALFDJ020000035.1 Protein Homology CDS 35613 36383 . - 0 ID=cds-HJH9166042.1;Parent=gene-O5D79_004662;Dbxref=NCBI_GP:HJH9166042.1;Name=HJH9166042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001547062.1;locus_tag=O5D79_004662;product=DUF3800 domain-containing protein;protein_id=HJH9166042.1;transl_table=11 DALFDJ020000035.1 tpg gene 36664 37395 . - . ID=gene-O5D79_004663;Name=traT;gbkey=Gene;gene=traT;gene_biotype=protein_coding;locus_tag=O5D79_004663 DALFDJ020000035.1 Protein Homology CDS 36664 37395 . - 0 ID=cds-HJH9166043.1;Parent=gene-O5D79_004663;Dbxref=NCBI_GP:HJH9166043.1;Name=HJH9166043.1;gbkey=CDS;gene=traT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490587.1;locus_tag=O5D79_004663;product=conjugal transfer complement resistance protein TraT;protein_id=HJH9166043.1;transl_table=11 DALFDJ020000035.1 tpg pseudogene 37981 38622 . - . ID=gene-O5D79_004664;Name=tnpC;gbkey=Gene;gene=tnpC;gene_biotype=pseudogene;locus_tag=O5D79_004664;pseudo=true DALFDJ020000035.1 Protein Homology CDS 37981 38622 . - 0 ID=cds-O5D79_004664;Parent=gene-O5D79_004664;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354984.1;locus_tag=O5D79_004664;product=IS66 family transposase;pseudo=true;transl_table=11 DALFDJ020000035.1 tpg pseudogene 38655 39233 . + . ID=gene-O5D79_004665;Name=O5D79_004665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004665;pseudo=true DALFDJ020000035.1 Protein Homology CDS 38655 39233 . + 0 ID=cds-O5D79_004665;Parent=gene-O5D79_004665;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001179707.1;locus_tag=O5D79_004665;product=IS110 family transposase;pseudo=true;transl_table=11 DALFDJ020000035.1 tpg pseudogene 39531 40519 . - . ID=gene-O5D79_004666;Name=O5D79_004666;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004666;pseudo=true DALFDJ020000035.1 Protein Homology CDS 39531 40519 . - 0 ID=cds-O5D79_004666;Parent=gene-O5D79_004666;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_046881606.1;locus_tag=O5D79_004666;product=IS4 family transposase;pseudo=true;transl_table=11 DALFDJ020000035.1 tpg pseudogene 40606 40749 . - . ID=gene-O5D79_004667;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=O5D79_004667;pseudo=true DALFDJ020000035.1 Protein Homology CDS 40606 40749 . - 0 ID=cds-O5D79_004667;Parent=gene-O5D79_004667;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309368.2;locus_tag=O5D79_004667;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;transl_table=11 DALFDJ020000035.1 tpg gene 40739 41050 . - . ID=gene-O5D79_004668;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=O5D79_004668 DALFDJ020000035.1 Protein Homology CDS 40739 41050 . - 0 ID=cds-HJH9166044.1;Parent=gene-O5D79_004668;Dbxref=NCBI_GP:HJH9166044.1;Name=HJH9166044.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000042918.1;locus_tag=O5D79_004668;product=IS66 family insertion sequence element accessory protein TnpA;protein_id=HJH9166044.1;transl_table=11 DALFDJ020000035.1 tpg gene 41170 42105 . - . ID=gene-O5D79_004669;Name=O5D79_004669;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004669 DALFDJ020000035.1 GeneMarkS-2+ CDS 41170 42105 . - 0 ID=cds-HJH9166045.1;Parent=gene-O5D79_004669;Dbxref=NCBI_GP:HJH9166045.1;Name=HJH9166045.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004669;product=fimbrial protein;protein_id=HJH9166045.1;transl_table=11 DALFDJ020000035.1 tpg gene 42138 42755 . - . ID=gene-O5D79_004670;Name=O5D79_004670;end_range=42755,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004670;partial=true DALFDJ020000035.1 Protein Homology CDS 42138 42755 . - 0 ID=cds-HJH9166046.1;Parent=gene-O5D79_004670;Dbxref=NCBI_GP:HJH9166046.1;Name=HJH9166046.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;end_range=42755,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: protein motif:HMM:NF012786.6;locus_tag=O5D79_004670;partial=true;product=fimbria/pilus outer membrane usher protein;protein_id=HJH9166046.1;transl_table=11 ##sequence-region DALFDJ020000036.1 1 41513 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000036.1 tpg region 1 41513 . + . ID=DALFDJ020000036.1:1..41513;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000036.1 tpg gene 1 1761 . - . ID=gene-O5D79_004671;Name=O5D79_004671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004671;partial=true;start_range=.,1 DALFDJ020000036.1 Protein Homology CDS 1 1761 . - 0 ID=cds-HJH9166047.1;Parent=gene-O5D79_004671;Dbxref=NCBI_GP:HJH9166047.1;Name=HJH9166047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459709.1;locus_tag=O5D79_004671;partial=true;product=glycosyltransferase;protein_id=HJH9166047.1;start_range=.,1;transl_table=11 DALFDJ020000036.1 tpg gene 1855 2565 . - . ID=gene-O5D79_004672;Name=O5D79_004672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004672 DALFDJ020000036.1 Protein Homology CDS 1855 2565 . - 0 ID=cds-HJH9166048.1;Parent=gene-O5D79_004672;Dbxref=NCBI_GP:HJH9166048.1;Name=HJH9166048.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459708.1;locus_tag=O5D79_004672;product=ABC transporter ATP-binding protein;protein_id=HJH9166048.1;transl_table=11 DALFDJ020000036.1 tpg gene 2569 3339 . - . ID=gene-O5D79_004673;Name=O5D79_004673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004673 DALFDJ020000036.1 Protein Homology CDS 2569 3339 . - 0 ID=cds-HJH9166049.1;Parent=gene-O5D79_004673;Dbxref=NCBI_GP:HJH9166049.1;Name=HJH9166049.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459707.1;locus_tag=O5D79_004673;product=ABC transporter permease;protein_id=HJH9166049.1;transl_table=11 DALFDJ020000036.1 tpg gene 3468 4601 . - . ID=gene-O5D79_004674;Name=O5D79_004674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004674 DALFDJ020000036.1 Protein Homology CDS 3468 4601 . - 0 ID=cds-HJH9166050.1;Parent=gene-O5D79_004674;Dbxref=NCBI_GP:HJH9166050.1;Name=HJH9166050.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459706.1;locus_tag=O5D79_004674;product=glycosyltransferase family 4 protein;protein_id=HJH9166050.1;transl_table=11 DALFDJ020000036.1 tpg gene 4614 5510 . - . ID=gene-O5D79_004675;Name=O5D79_004675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004675 DALFDJ020000036.1 Protein Homology CDS 4614 5510 . - 0 ID=cds-HJH9166051.1;Parent=gene-O5D79_004675;Dbxref=NCBI_GP:HJH9166051.1;Name=HJH9166051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459705.1;locus_tag=O5D79_004675;product=glycosyltransferase;protein_id=HJH9166051.1;transl_table=11 DALFDJ020000036.1 tpg gene 5507 6658 . - . ID=gene-O5D79_004676;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=O5D79_004676 DALFDJ020000036.1 Protein Homology CDS 5507 6658 . - 0 ID=cds-HJH9166052.1;Parent=gene-O5D79_004676;Dbxref=NCBI_GP:HJH9166052.1;Name=HJH9166052.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459704.1;locus_tag=O5D79_004676;product=UDP-galactopyranose mutase;protein_id=HJH9166052.1;transl_table=11 DALFDJ020000036.1 tpg gene 6944 7684 . - . ID=gene-O5D79_004677;Name=O5D79_004677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004677 DALFDJ020000036.1 Protein Homology CDS 6944 7684 . - 0 ID=cds-HJH9166053.1;Parent=gene-O5D79_004677;Dbxref=NCBI_GP:HJH9166053.1;Name=HJH9166053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459703.1;locus_tag=O5D79_004677;product=transport protein;protein_id=HJH9166053.1;transl_table=11 DALFDJ020000036.1 tpg gene 7686 8021 . - . ID=gene-O5D79_004678;Name=O5D79_004678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004678 DALFDJ020000036.1 Protein Homology CDS 7686 8021 . - 0 ID=cds-HJH9166054.1;Parent=gene-O5D79_004678;Dbxref=NCBI_GP:HJH9166054.1;Name=HJH9166054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459702.1;locus_tag=O5D79_004678;product=hypothetical protein;protein_id=HJH9166054.1;transl_table=11 DALFDJ020000036.1 tpg gene 8481 9047 . - . ID=gene-O5D79_004679;Name=O5D79_004679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004679 DALFDJ020000036.1 Protein Homology CDS 8481 9047 . - 0 ID=cds-HJH9166055.1;Parent=gene-O5D79_004679;Dbxref=NCBI_GP:HJH9166055.1;Name=HJH9166055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459701.1;locus_tag=O5D79_004679;product=tyrosine-type DNA invertase;protein_id=HJH9166055.1;transl_table=11 DALFDJ020000036.1 tpg gene 9097 9237 . - . ID=gene-O5D79_004680;Name=O5D79_004680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004680 DALFDJ020000036.1 Protein Homology CDS 9097 9237 . - 0 ID=cds-HJH9166056.1;Parent=gene-O5D79_004680;Dbxref=NCBI_GP:HJH9166056.1;Name=HJH9166056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534230.1;locus_tag=O5D79_004680;product=hypothetical protein;protein_id=HJH9166056.1;transl_table=11 DALFDJ020000036.1 tpg gene 9561 10295 . - . ID=gene-O5D79_004681;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=O5D79_004681 DALFDJ020000036.1 Protein Homology CDS 9561 10295 . - 0 ID=cds-HJH9166057.1;Parent=gene-O5D79_004681;Dbxref=NCBI_GP:HJH9166057.1;Name=HJH9166057.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459699.1;locus_tag=O5D79_004681;product=5-oxoprolinase subunit PxpA;protein_id=HJH9166057.1;transl_table=11 DALFDJ020000036.1 tpg gene 10285 11217 . - . ID=gene-O5D79_004682;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=O5D79_004682 DALFDJ020000036.1 Protein Homology CDS 10285 11217 . - 0 ID=cds-HJH9166058.1;Parent=gene-O5D79_004682;Dbxref=NCBI_GP:HJH9166058.1;Name=HJH9166058.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpC;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459698.1;locus_tag=O5D79_004682;product=5-oxoprolinase subunit PxpC;protein_id=HJH9166058.1;transl_table=11 DALFDJ020000036.1 tpg gene 11211 11867 . - . ID=gene-O5D79_004683;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=O5D79_004683 DALFDJ020000036.1 Protein Homology CDS 11211 11867 . - 0 ID=cds-HJH9166059.1;Parent=gene-O5D79_004683;Dbxref=NCBI_GP:HJH9166059.1;Name=HJH9166059.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459697.1;locus_tag=O5D79_004683;product=5-oxoprolinase subunit PxpB;protein_id=HJH9166059.1;transl_table=11 DALFDJ020000036.1 tpg gene 11883 12626 . - . ID=gene-O5D79_004684;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=O5D79_004684 DALFDJ020000036.1 Protein Homology CDS 11883 12626 . - 0 ID=cds-HJH9166060.1;Parent=gene-O5D79_004684;Dbxref=NCBI_GP:HJH9166060.1;Name=HJH9166060.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=O5D79_004684;product=radiation resistance protein YbgI;protein_id=HJH9166060.1;transl_table=11 DALFDJ020000036.1 tpg gene 12955 14436 . + . ID=gene-O5D79_004685;Name=O5D79_004685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004685 DALFDJ020000036.1 Protein Homology CDS 12955 14436 . + 0 ID=cds-HJH9166061.1;Parent=gene-O5D79_004685;Dbxref=NCBI_GP:HJH9166061.1;Name=HJH9166061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459695.1;locus_tag=O5D79_004685;product=MFS transporter;protein_id=HJH9166061.1;transl_table=11 DALFDJ020000036.1 tpg gene 14475 15896 . - . ID=gene-O5D79_004686;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=O5D79_004686 DALFDJ020000036.1 Protein Homology CDS 14475 15896 . - 0 ID=cds-HJH9166062.1;Parent=gene-O5D79_004686;Dbxref=NCBI_GP:HJH9166062.1;Name=HJH9166062.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459694.1;locus_tag=O5D79_004686;product=deoxyribodipyrimidine photo-lyase;protein_id=HJH9166062.1;transl_table=11 DALFDJ020000036.1 tpg gene 16007 16213 . - . ID=gene-O5D79_004687;Name=O5D79_004687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004687 DALFDJ020000036.1 Protein Homology CDS 16007 16213 . - 0 ID=cds-HJH9166063.1;Parent=gene-O5D79_004687;Dbxref=NCBI_GP:HJH9166063.1;Name=HJH9166063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459693.1;locus_tag=O5D79_004687;product=YbfA family protein;protein_id=HJH9166063.1;transl_table=11 DALFDJ020000036.1 tpg gene 16550 16639 . + . ID=gene-O5D79_004688;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=O5D79_004688 DALFDJ020000036.1 Protein Homology CDS 16550 16639 . + 0 ID=cds-HJH9166064.1;Parent=gene-O5D79_004688;Dbxref=NCBI_GP:HJH9166064.1;Name=HJH9166064.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=O5D79_004688;product=K(+)-transporting ATPase subunit F;protein_id=HJH9166064.1;transl_table=11 DALFDJ020000036.1 tpg gene 16639 18318 . + . ID=gene-O5D79_004689;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=O5D79_004689 DALFDJ020000036.1 Protein Homology CDS 16639 18318 . + 0 ID=cds-HJH9166065.1;Parent=gene-O5D79_004689;Dbxref=NCBI_GP:HJH9166065.1;Name=HJH9166065.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459691.1;locus_tag=O5D79_004689;product=potassium-transporting ATPase subunit KdpA;protein_id=HJH9166065.1;transl_table=11 DALFDJ020000036.1 tpg gene 18339 20387 . + . ID=gene-O5D79_004690;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=O5D79_004690 DALFDJ020000036.1 Protein Homology CDS 18339 20387 . + 0 ID=cds-HJH9166066.1;Parent=gene-O5D79_004690;Dbxref=NCBI_GP:HJH9166066.1;Name=HJH9166066.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459690.1;locus_tag=O5D79_004690;product=potassium-transporting ATPase subunit KdpB;protein_id=HJH9166066.1;transl_table=11 DALFDJ020000036.1 tpg gene 20396 20980 . + . ID=gene-O5D79_004691;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=O5D79_004691 DALFDJ020000036.1 Protein Homology CDS 20396 20980 . + 0 ID=cds-HJH9166067.1;Parent=gene-O5D79_004691;Dbxref=NCBI_GP:HJH9166067.1;Name=HJH9166067.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459689.1;locus_tag=O5D79_004691;product=potassium-transporting ATPase subunit KdpC;protein_id=HJH9166067.1;transl_table=11 DALFDJ020000036.1 tpg gene 20977 23661 . + . ID=gene-O5D79_004692;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=O5D79_004692 DALFDJ020000036.1 Protein Homology CDS 20977 23661 . + 0 ID=cds-HJH9166068.1;Parent=gene-O5D79_004692;Dbxref=NCBI_GP:HJH9166068.1;Name=HJH9166068.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459688.1;locus_tag=O5D79_004692;product=two-component system sensor histidine kinase KdpD;protein_id=HJH9166068.1;transl_table=11 DALFDJ020000036.1 tpg gene 23658 24335 . + . ID=gene-O5D79_004693;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=O5D79_004693 DALFDJ020000036.1 Protein Homology CDS 23658 24335 . + 0 ID=cds-HJH9166069.1;Parent=gene-O5D79_004693;Dbxref=NCBI_GP:HJH9166069.1;Name=HJH9166069.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459687.1;locus_tag=O5D79_004693;product=two-component system response regulator KdpE;protein_id=HJH9166069.1;transl_table=11 DALFDJ020000036.1 tpg gene 24613 24717 . + . ID=gene-O5D79_004694;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=O5D79_004694 DALFDJ020000036.1 Protein Homology CDS 24613 24717 . + 0 ID=cds-HJH9166070.1;Parent=gene-O5D79_004694;Dbxref=NCBI_GP:HJH9166070.1;Name=HJH9166070.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=O5D79_004694;product=leader peptide SpeFL;protein_id=HJH9166070.1;transl_table=11 DALFDJ020000036.1 tpg gene 25097 27295 . + . ID=gene-O5D79_004695;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=O5D79_004695 DALFDJ020000036.1 Protein Homology CDS 25097 27295 . + 0 ID=cds-HJH9166071.1;Parent=gene-O5D79_004695;Dbxref=NCBI_GP:HJH9166071.1;Name=HJH9166071.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=O5D79_004695;product=ornithine decarboxylase SpeF;protein_id=HJH9166071.1;transl_table=11 DALFDJ020000036.1 tpg gene 27292 28611 . + . ID=gene-O5D79_004696;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=O5D79_004696 DALFDJ020000036.1 Protein Homology CDS 27292 28611 . + 0 ID=cds-HJH9166072.1;Parent=gene-O5D79_004696;Dbxref=NCBI_GP:HJH9166072.1;Name=HJH9166072.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459685.1;locus_tag=O5D79_004696;product=putrescine-ornithine antiporter;protein_id=HJH9166072.1;transl_table=11 DALFDJ020000036.1 tpg gene 28676 29161 . + . ID=gene-O5D79_004697;Name=O5D79_004697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004697 DALFDJ020000036.1 Protein Homology CDS 28676 29161 . + 0 ID=cds-HJH9166073.1;Parent=gene-O5D79_004697;Dbxref=NCBI_GP:HJH9166073.1;Name=HJH9166073.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459684.1;locus_tag=O5D79_004697;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=HJH9166073.1;transl_table=11 DALFDJ020000036.1 tpg gene 29276 30916 . - . ID=gene-O5D79_004698;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=O5D79_004698 DALFDJ020000036.1 Protein Homology CDS 29276 30916 . - 0 ID=cds-HJH9166074.1;Parent=gene-O5D79_004698;Dbxref=NCBI_GP:HJH9166074.1;Name=HJH9166074.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459683.1;locus_tag=O5D79_004698;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=HJH9166074.1;transl_table=11 DALFDJ020000036.1 tpg gene 30941 31483 . - . ID=gene-O5D79_004699;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=O5D79_004699 DALFDJ020000036.1 Protein Homology CDS 30941 31483 . - 0 ID=cds-HJH9166075.1;Parent=gene-O5D79_004699;Dbxref=NCBI_GP:HJH9166075.1;Name=HJH9166075.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459682.1;locus_tag=O5D79_004699;product=replication initiation negative regulator SeqA;protein_id=HJH9166075.1;transl_table=11 DALFDJ020000036.1 tpg gene 31668 32438 . + . ID=gene-O5D79_004700;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=O5D79_004700 DALFDJ020000036.1 Protein Homology CDS 31668 32438 . + 0 ID=cds-HJH9166076.1;Parent=gene-O5D79_004700;Dbxref=NCBI_GP:HJH9166076.1;Name=HJH9166076.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459681.1;locus_tag=O5D79_004700;product=esterase;protein_id=HJH9166076.1;transl_table=11 DALFDJ020000036.1 tpg gene 32572 32865 . + . ID=gene-O5D79_004701;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=O5D79_004701 DALFDJ020000036.1 Protein Homology CDS 32572 32865 . + 0 ID=cds-HJH9166077.1;Parent=gene-O5D79_004701;Dbxref=NCBI_GP:HJH9166077.1;Name=HJH9166077.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459680.1;locus_tag=O5D79_004701;product=LexA regulated protein;protein_id=HJH9166077.1;transl_table=11 DALFDJ020000036.1 tpg gene 33016 33546 . + . ID=gene-O5D79_004702;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=O5D79_004702 DALFDJ020000036.1 Protein Homology CDS 33016 33546 . + 0 ID=cds-HJH9166078.1;Parent=gene-O5D79_004702;Dbxref=NCBI_GP:HJH9166078.1;Name=HJH9166078.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=O5D79_004702;product=flavodoxin FldA;protein_id=HJH9166078.1;transl_table=11 DALFDJ020000036.1 tpg pseudogene 33750 33835 . + . ID=gene-O5D79_004703;Name=O5D79_004703;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004703;pseudo=true DALFDJ020000036.1 Protein Homology CDS 33750 33835 . + 0 ID=cds-O5D79_004703;Parent=gene-O5D79_004703;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=O5D79_004703;product=fur leader peptide;pseudo=true;transl_table=11 DALFDJ020000036.1 tpg gene 33828 34280 . + . ID=gene-O5D79_004704;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=O5D79_004704 DALFDJ020000036.1 Protein Homology CDS 33828 34280 . + 0 ID=cds-HJH9166079.1;Parent=gene-O5D79_004704;Dbxref=NCBI_GP:HJH9166079.1;Name=HJH9166079.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459678.1;locus_tag=O5D79_004704;product=ferric iron uptake transcriptional regulator;protein_id=HJH9166079.1;transl_table=11 DALFDJ020000036.1 tpg gene 34395 35321 . + . ID=gene-O5D79_004705;Name=tcuR;gbkey=Gene;gene=tcuR;gene_biotype=protein_coding;locus_tag=O5D79_004705 DALFDJ020000036.1 Protein Homology CDS 34395 35321 . + 0 ID=cds-HJH9166080.1;Parent=gene-O5D79_004705;Dbxref=NCBI_GP:HJH9166080.1;Name=HJH9166080.1;gbkey=CDS;gene=tcuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459677.1;locus_tag=O5D79_004705;product=tricarballylate utilization LysR family transcriptional regulator TcuR;protein_id=HJH9166080.1;transl_table=11 DALFDJ020000036.1 tpg gene 35419 36822 . + . ID=gene-O5D79_004706;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=O5D79_004706 DALFDJ020000036.1 Protein Homology CDS 35419 36822 . + 0 ID=cds-HJH9166081.1;Parent=gene-O5D79_004706;Dbxref=NCBI_GP:HJH9166081.1;Name=HJH9166081.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459676.1;locus_tag=O5D79_004706;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=HJH9166081.1;transl_table=11 DALFDJ020000036.1 tpg gene 36809 37948 . + . ID=gene-O5D79_004707;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=O5D79_004707 DALFDJ020000036.1 Protein Homology CDS 36809 37948 . + 0 ID=cds-HJH9166082.1;Parent=gene-O5D79_004707;Dbxref=NCBI_GP:HJH9166082.1;Name=HJH9166082.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459675.1;locus_tag=O5D79_004707;product=tricarballylate utilization protein TcuB;protein_id=HJH9166082.1;transl_table=11 DALFDJ020000036.1 tpg gene 37999 39303 . + . ID=gene-O5D79_004708;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=O5D79_004708 DALFDJ020000036.1 Protein Homology CDS 37999 39303 . + 0 ID=cds-HJH9166083.1;Parent=gene-O5D79_004708;Dbxref=NCBI_GP:HJH9166083.1;Name=HJH9166083.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459674.1;locus_tag=O5D79_004708;product=tricarballylate/proton symporter TcuC;protein_id=HJH9166083.1;transl_table=11 DALFDJ020000036.1 tpg gene 39352 39684 . - . ID=gene-O5D79_004709;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=O5D79_004709 DALFDJ020000036.1 Protein Homology CDS 39352 39684 . - 0 ID=cds-HJH9166084.1;Parent=gene-O5D79_004709;Dbxref=NCBI_GP:HJH9166084.1;Name=HJH9166084.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459673.1;locus_tag=O5D79_004709;product=ChiQ/YbfN family lipoprotein;protein_id=HJH9166084.1;transl_table=11 DALFDJ020000036.1 tpg gene 39734 41140 . - . ID=gene-O5D79_004710;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=O5D79_004710 DALFDJ020000036.1 Protein Homology CDS 39734 41140 . - 0 ID=cds-HJH9166085.1;Parent=gene-O5D79_004710;Dbxref=NCBI_GP:HJH9166085.1;Name=HJH9166085.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459672.1;locus_tag=O5D79_004710;product=chitoporin ChiP;protein_id=HJH9166085.1;transl_table=11 ##sequence-region DALFDJ020000037.1 1 41052 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000037.1 tpg region 1 41052 . + . ID=DALFDJ020000037.1:1..41052;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000037.1 tpg gene 1 2532 . - . ID=gene-O5D79_004711;Name=O5D79_004711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004711;partial=true;start_range=.,1 DALFDJ020000037.1 Protein Homology CDS 1 2532 . - 0 ID=cds-HJH9166086.1;Parent=gene-O5D79_004711;Dbxref=NCBI_GP:HJH9166086.1;Name=HJH9166086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001402129.1;locus_tag=O5D79_004711;partial=true;product=DUF6531 domain-containing protein;protein_id=HJH9166086.1;start_range=.,1;transl_table=11 DALFDJ020000037.1 tpg gene 2563 2994 . - . ID=gene-O5D79_004712;Name=O5D79_004712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004712 DALFDJ020000037.1 Protein Homology CDS 2563 2994 . - 0 ID=cds-HJH9166087.1;Parent=gene-O5D79_004712;Dbxref=NCBI_GP:HJH9166087.1;Name=HJH9166087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199685.1;locus_tag=O5D79_004712;product=DcrB-related protein;protein_id=HJH9166087.1;transl_table=11 DALFDJ020000037.1 tpg gene 3025 5241 . - . ID=gene-O5D79_004713;Name=O5D79_004713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004713 DALFDJ020000037.1 Protein Homology CDS 3025 5241 . - 0 ID=cds-HJH9166088.1;Parent=gene-O5D79_004713;Dbxref=NCBI_GP:HJH9166088.1;Name=HJH9166088.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542647.1;locus_tag=O5D79_004713;product=type VI secretion system Vgr family protein;protein_id=HJH9166088.1;transl_table=11 DALFDJ020000037.1 tpg gene 5273 5722 . - . ID=gene-O5D79_004714;Name=O5D79_004714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004714 DALFDJ020000037.1 Protein Homology CDS 5273 5722 . - 0 ID=cds-HJH9166089.1;Parent=gene-O5D79_004714;Dbxref=NCBI_GP:HJH9166089.1;Name=HJH9166089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000275733.1;locus_tag=O5D79_004714;product=hypothetical protein;protein_id=HJH9166089.1;transl_table=11 DALFDJ020000037.1 tpg gene 5736 6437 . - . ID=gene-O5D79_004715;Name=O5D79_004715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004715 DALFDJ020000037.1 Protein Homology CDS 5736 6437 . - 0 ID=cds-HJH9166090.1;Parent=gene-O5D79_004715;Dbxref=NCBI_GP:HJH9166090.1;Name=HJH9166090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043958.1;locus_tag=O5D79_004715;product=hypothetical protein;protein_id=HJH9166090.1;transl_table=11 DALFDJ020000037.1 tpg pseudogene 6448 6555 . - . ID=gene-O5D79_004716;Name=O5D79_004716;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004716;pseudo=true DALFDJ020000037.1 Protein Homology CDS 6448 6555 . - 0 ID=cds-O5D79_004716;Parent=gene-O5D79_004716;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254128.1;locus_tag=O5D79_004716;product=TagF domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000037.1 tpg gene 6564 7025 . - . ID=gene-O5D79_004717;Name=O5D79_004717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004717 DALFDJ020000037.1 Protein Homology CDS 6564 7025 . - 0 ID=cds-HJH9166091.1;Parent=gene-O5D79_004717;Dbxref=NCBI_GP:HJH9166091.1;Name=HJH9166091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670388.1;locus_tag=O5D79_004717;product=hypothetical protein;protein_id=HJH9166091.1;transl_table=11 DALFDJ020000037.1 tpg pseudogene 7010 7479 . - . ID=gene-O5D79_004718;Name=O5D79_004718;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004718;pseudo=true DALFDJ020000037.1 Protein Homology CDS 7010 7479 . - 0 ID=cds-O5D79_004718;Parent=gene-O5D79_004718;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528842.1;locus_tag=O5D79_004718;product=glucosaminidase domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000037.1 tpg gene 7583 8056 . - . ID=gene-O5D79_004719;Name=O5D79_004719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004719 DALFDJ020000037.1 Protein Homology CDS 7583 8056 . - 0 ID=cds-HJH9166092.1;Parent=gene-O5D79_004719;Dbxref=NCBI_GP:HJH9166092.1;Name=HJH9166092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506348.1;locus_tag=O5D79_004719;product=hypothetical protein;protein_id=HJH9166092.1;transl_table=11 DALFDJ020000037.1 tpg gene 8041 8511 . - . ID=gene-O5D79_004720;Name=O5D79_004720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004720 DALFDJ020000037.1 Protein Homology CDS 8041 8511 . - 0 ID=cds-HJH9166093.1;Parent=gene-O5D79_004720;Dbxref=NCBI_GP:HJH9166093.1;Name=HJH9166093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000501515.1;locus_tag=O5D79_004720;product=glucosaminidase domain-containing protein;protein_id=HJH9166093.1;transl_table=11 DALFDJ020000037.1 tpg gene 8554 9321 . - . ID=gene-O5D79_004721;Name=O5D79_004721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004721 DALFDJ020000037.1 Protein Homology CDS 8554 9321 . - 0 ID=cds-HJH9166094.1;Parent=gene-O5D79_004721;Dbxref=NCBI_GP:HJH9166094.1;Name=HJH9166094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254119.1;locus_tag=O5D79_004721;product=TagF domain-containing protein;protein_id=HJH9166094.1;transl_table=11 DALFDJ020000037.1 tpg gene 9321 13190 . - . ID=gene-O5D79_004722;Name=icmF;gbkey=Gene;gene=icmF;gene_biotype=protein_coding;locus_tag=O5D79_004722 DALFDJ020000037.1 Protein Homology CDS 9321 13190 . - 0 ID=cds-HJH9166095.1;Parent=gene-O5D79_004722;Dbxref=NCBI_GP:HJH9166095.1;Name=HJH9166095.1;gbkey=CDS;gene=icmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=O5D79_004722;product=Type VI secretion protein IcmF;protein_id=HJH9166095.1;transl_table=11 DALFDJ020000037.1 tpg gene 13224 13655 . - . ID=gene-O5D79_004723;Name=sciR;gbkey=Gene;gene=sciR;gene_biotype=protein_coding;locus_tag=O5D79_004723 DALFDJ020000037.1 Protein Homology CDS 13224 13655 . - 0 ID=cds-HJH9166096.1;Parent=gene-O5D79_004723;Dbxref=NCBI_GP:HJH9166096.1;Name=HJH9166096.1;gbkey=CDS;gene=sciR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459282.1;locus_tag=O5D79_004723;product=Shiga-like toxin A subunit SciR;protein_id=HJH9166096.1;transl_table=11 DALFDJ020000037.1 tpg gene 13857 14630 . - . ID=gene-O5D79_004724;Name=O5D79_004724;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004724 DALFDJ020000037.1 Protein Homology CDS 13857 14630 . - 0 ID=cds-HJH9166097.1;Parent=gene-O5D79_004724;Dbxref=NCBI_GP:HJH9166097.1;Name=HJH9166097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459281.1;locus_tag=O5D79_004724;product=Rap1a/Tai family immunity protein;protein_id=HJH9166097.1;transl_table=11 DALFDJ020000037.1 tpg gene 14635 15939 . - . ID=gene-O5D79_004725;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=O5D79_004725 DALFDJ020000037.1 Protein Homology CDS 14635 15939 . - 0 ID=cds-HJH9166098.1;Parent=gene-O5D79_004725;Dbxref=NCBI_GP:HJH9166098.1;Name=HJH9166098.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssL;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459280.1;locus_tag=O5D79_004725;product=type VI secretion system protein TssL%2C long form;protein_id=HJH9166098.1;transl_table=11 DALFDJ020000037.1 tpg gene 15936 17279 . - . ID=gene-O5D79_004726;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=O5D79_004726 DALFDJ020000037.1 Protein Homology CDS 15936 17279 . - 0 ID=cds-HJH9166099.1;Parent=gene-O5D79_004726;Dbxref=NCBI_GP:HJH9166099.1;Name=HJH9166099.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459279.1;locus_tag=O5D79_004726;product=type VI secretion system baseplate subunit TssK;protein_id=HJH9166099.1;transl_table=11 DALFDJ020000037.1 tpg gene 17283 17819 . - . ID=gene-O5D79_004727;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=O5D79_004727 DALFDJ020000037.1 Protein Homology CDS 17283 17819 . - 0 ID=cds-HJH9166100.1;Parent=gene-O5D79_004727;Dbxref=NCBI_GP:HJH9166100.1;Name=HJH9166100.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459278.1;locus_tag=O5D79_004727;product=type VI secretion system lipoprotein TssJ;protein_id=HJH9166100.1;transl_table=11 DALFDJ020000037.1 tpg gene 17886 18371 . - . ID=gene-O5D79_004728;Name=O5D79_004728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004728 DALFDJ020000037.1 Protein Homology CDS 17886 18371 . - 0 ID=cds-HJH9166101.1;Parent=gene-O5D79_004728;Dbxref=NCBI_GP:HJH9166101.1;Name=HJH9166101.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459274.1;locus_tag=O5D79_004728;product=Hcp family type VI secretion system effector;protein_id=HJH9166101.1;transl_table=11 DALFDJ020000037.1 tpg gene 18623 19069 . - . ID=gene-O5D79_004729;Name=O5D79_004729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004729 DALFDJ020000037.1 Protein Homology CDS 18623 19069 . - 0 ID=cds-HJH9166102.1;Parent=gene-O5D79_004729;Dbxref=NCBI_GP:HJH9166102.1;Name=HJH9166102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535435.1;locus_tag=O5D79_004729;product=STY0301 family protein;protein_id=HJH9166102.1;transl_table=11 DALFDJ020000037.1 tpg gene 19082 19468 . - . ID=gene-O5D79_004730;Name=O5D79_004730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004730 DALFDJ020000037.1 Protein Homology CDS 19082 19468 . - 0 ID=cds-HJH9166103.1;Parent=gene-O5D79_004730;Dbxref=NCBI_GP:HJH9166103.1;Name=HJH9166103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000323515.1;locus_tag=O5D79_004730;product=BPSL0067 family protein;protein_id=HJH9166103.1;transl_table=11 DALFDJ020000037.1 tpg gene 19533 21041 . - . ID=gene-O5D79_004731;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=O5D79_004731 DALFDJ020000037.1 Protein Homology CDS 19533 21041 . - 0 ID=cds-HJH9166104.1;Parent=gene-O5D79_004731;Dbxref=NCBI_GP:HJH9166104.1;Name=HJH9166104.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459271.1;locus_tag=O5D79_004731;product=type VI secretion system contractile sheath large subunit;protein_id=HJH9166104.1;transl_table=11 DALFDJ020000037.1 tpg gene 21065 21607 . - . ID=gene-O5D79_004732;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=O5D79_004732 DALFDJ020000037.1 Protein Homology CDS 21065 21607 . - 0 ID=cds-HJH9166105.1;Parent=gene-O5D79_004732;Dbxref=NCBI_GP:HJH9166105.1;Name=HJH9166105.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459270.1;locus_tag=O5D79_004732;product=type VI secretion system contractile sheath small subunit;protein_id=HJH9166105.1;transl_table=11 DALFDJ020000037.1 tpg gene 21707 24346 . - . ID=gene-O5D79_004733;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=O5D79_004733 DALFDJ020000037.1 Protein Homology CDS 21707 24346 . - 0 ID=cds-HJH9166106.1;Parent=gene-O5D79_004733;Dbxref=NCBI_GP:HJH9166106.1;Name=HJH9166106.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459269.1;locus_tag=O5D79_004733;product=type VI secretion system ATPase TssH;protein_id=HJH9166106.1;transl_table=11 DALFDJ020000037.1 tpg gene 24714 25616 . + . ID=gene-O5D79_004734;Name=tagK;gbkey=Gene;gene=tagK;gene_biotype=protein_coding;locus_tag=O5D79_004734 DALFDJ020000037.1 Protein Homology CDS 24714 25616 . + 0 ID=cds-HJH9166107.1;Parent=gene-O5D79_004734;Dbxref=NCBI_GP:HJH9166107.1;Name=HJH9166107.1;gbkey=CDS;gene=tagK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459268.1;locus_tag=O5D79_004734;product=type VI secretion system-associated protein TagK;protein_id=HJH9166107.1;transl_table=11 DALFDJ020000037.1 tpg gene 25603 26427 . + . ID=gene-O5D79_004735;Name=O5D79_004735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004735 DALFDJ020000037.1 Protein Homology CDS 25603 26427 . + 0 ID=cds-HJH9166108.1;Parent=gene-O5D79_004735;Dbxref=NCBI_GP:HJH9166108.1;Name=HJH9166108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459267.1;locus_tag=O5D79_004735;product=type VI secretion system accessory protein TagJ;protein_id=HJH9166108.1;transl_table=11 DALFDJ020000037.1 tpg gene 26424 26918 . + . ID=gene-O5D79_004736;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=O5D79_004736 DALFDJ020000037.1 Protein Homology CDS 26424 26918 . + 0 ID=cds-HJH9166109.1;Parent=gene-O5D79_004736;Dbxref=NCBI_GP:HJH9166109.1;Name=HJH9166109.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459266.1;locus_tag=O5D79_004736;product=type VI secretion system baseplate subunit TssE;protein_id=HJH9166109.1;transl_table=11 DALFDJ020000037.1 tpg gene 26934 28817 . + . ID=gene-O5D79_004737;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=O5D79_004737 DALFDJ020000037.1 Protein Homology CDS 26934 28817 . + 0 ID=cds-HJH9166110.1;Parent=gene-O5D79_004737;Dbxref=NCBI_GP:HJH9166110.1;Name=HJH9166110.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459265.1;locus_tag=O5D79_004737;product=type VI secretion system baseplate subunit TssF;protein_id=HJH9166110.1;transl_table=11 DALFDJ020000037.1 tpg gene 28814 29809 . + . ID=gene-O5D79_004738;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=O5D79_004738 DALFDJ020000037.1 Protein Homology CDS 28814 29809 . + 0 ID=cds-HJH9166111.1;Parent=gene-O5D79_004738;Dbxref=NCBI_GP:HJH9166111.1;Name=HJH9166111.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459264.1;locus_tag=O5D79_004738;product=type VI secretion system baseplate subunit TssG;protein_id=HJH9166111.1;transl_table=11 DALFDJ020000037.1 tpg gene 29820 30875 . + . ID=gene-O5D79_004739;Name=O5D79_004739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004739 DALFDJ020000037.1 Protein Homology CDS 29820 30875 . + 0 ID=cds-HJH9166112.1;Parent=gene-O5D79_004739;Dbxref=NCBI_GP:HJH9166112.1;Name=HJH9166112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459263.1;locus_tag=O5D79_004739;product=ImpA family type VI secretion system protein;protein_id=HJH9166112.1;transl_table=11 DALFDJ020000037.1 tpg gene 31196 31272 . - . ID=gene-O5D79_004740;Name=O5D79_004740;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_004740 DALFDJ020000037.1 tRNAscan-SE tRNA 31196 31272 . - . ID=rna-O5D79_004740;Parent=gene-O5D79_004740;anticodon=(pos:complement(31236..31238));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004740;product=tRNA-Asp DALFDJ020000037.1 tRNAscan-SE exon 31196 31272 . - . ID=exon-O5D79_004740-1;Parent=rna-O5D79_004740;anticodon=(pos:complement(31236..31238));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004740;product=tRNA-Asp DALFDJ020000037.1 tpg gene 31406 32137 . - . ID=gene-O5D79_004741;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=O5D79_004741 DALFDJ020000037.1 Protein Homology CDS 31406 32137 . - 0 ID=cds-HJH9166113.1;Parent=gene-O5D79_004741;Dbxref=NCBI_GP:HJH9166113.1;Name=HJH9166113.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459262.1;locus_tag=O5D79_004741;product=DNA polymerase III subunit epsilon;protein_id=HJH9166113.1;transl_table=11 DALFDJ020000037.1 tpg gene 32201 32668 . + . ID=gene-O5D79_004742;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=O5D79_004742 DALFDJ020000037.1 Protein Homology CDS 32201 32668 . + 0 ID=cds-HJH9166114.1;Parent=gene-O5D79_004742;Dbxref=NCBI_GP:HJH9166114.1;Name=HJH9166114.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459261.1;locus_tag=O5D79_004742;product=ribonuclease HI;protein_id=HJH9166114.1;transl_table=11 DALFDJ020000037.1 tpg gene 32665 33387 . - . ID=gene-O5D79_004743;Name=O5D79_004743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004743 DALFDJ020000037.1 Protein Homology CDS 32665 33387 . - 0 ID=cds-HJH9166115.1;Parent=gene-O5D79_004743;Dbxref=NCBI_GP:HJH9166115.1;Name=HJH9166115.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459260.1;locus_tag=O5D79_004743;product=class I SAM-dependent methyltransferase;protein_id=HJH9166115.1;transl_table=11 DALFDJ020000037.1 tpg gene 33422 34177 . + . ID=gene-O5D79_004744;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=O5D79_004744 DALFDJ020000037.1 Protein Homology CDS 33422 34177 . + 0 ID=cds-HJH9166116.1;Parent=gene-O5D79_004744;Dbxref=NCBI_GP:HJH9166116.1;Name=HJH9166116.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459259.1;locus_tag=O5D79_004744;product=hydroxyacylglutathione hydrolase;protein_id=HJH9166116.1;transl_table=11 DALFDJ020000037.1 tpg gene 34249 35616 . + . ID=gene-O5D79_004745;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=O5D79_004745 DALFDJ020000037.1 Protein Homology CDS 34249 35616 . + 0 ID=cds-HJH9166117.1;Parent=gene-O5D79_004745;Dbxref=NCBI_GP:HJH9166117.1;Name=HJH9166117.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=O5D79_004745;product=murein transglycosylase D;protein_id=HJH9166117.1;transl_table=11 DALFDJ020000037.1 tpg gene 35672 36442 . - . ID=gene-O5D79_004746;Name=O5D79_004746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004746 DALFDJ020000037.1 Protein Homology CDS 35672 36442 . - 0 ID=cds-HJH9166118.1;Parent=gene-O5D79_004746;Dbxref=NCBI_GP:HJH9166118.1;Name=HJH9166118.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459257.1;locus_tag=O5D79_004746;product=class I SAM-dependent methyltransferase;protein_id=HJH9166118.1;transl_table=11 DALFDJ020000037.1 tpg gene 36520 37320 . - . ID=gene-O5D79_004747;Name=O5D79_004747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004747 DALFDJ020000037.1 Protein Homology CDS 36520 37320 . - 0 ID=cds-HJH9166119.1;Parent=gene-O5D79_004747;Dbxref=NCBI_GP:HJH9166119.1;Name=HJH9166119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=O5D79_004747;product=endonuclease/exonuclease/phosphatase family protein;protein_id=HJH9166119.1;transl_table=11 DALFDJ020000037.1 tpg gene 37452 38627 . - . ID=gene-O5D79_004748;Name=O5D79_004748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004748 DALFDJ020000037.1 Protein Homology CDS 37452 38627 . - 0 ID=cds-HJH9166120.1;Parent=gene-O5D79_004748;Dbxref=NCBI_GP:HJH9166120.1;Name=HJH9166120.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459255.1;locus_tag=O5D79_004748;product=MFS transporter;protein_id=HJH9166120.1;transl_table=11 DALFDJ020000037.1 tpg gene 38732 39646 . + . ID=gene-O5D79_004749;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=O5D79_004749 DALFDJ020000037.1 Protein Homology CDS 38732 39646 . + 0 ID=cds-HJH9166121.1;Parent=gene-O5D79_004749;Dbxref=NCBI_GP:HJH9166121.1;Name=HJH9166121.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459254.1;locus_tag=O5D79_004749;product=DNA-binding transcriptional regulator YafC;protein_id=HJH9166121.1;transl_table=11 DALFDJ020000037.1 tpg gene 39668 40471 . - . ID=gene-O5D79_004750;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=O5D79_004750 DALFDJ020000037.1 Protein Homology CDS 39668 40471 . - 0 ID=cds-HJH9166122.1;Parent=gene-O5D79_004750;Dbxref=NCBI_GP:HJH9166122.1;Name=HJH9166122.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=O5D79_004750;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=HJH9166122.1;transl_table=11 DALFDJ020000037.1 tpg gene 40636 40712 . - . ID=gene-O5D79_004751;Name=O5D79_004751;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_004751 DALFDJ020000037.1 tRNAscan-SE tRNA 40636 40712 . - . ID=rna-O5D79_004751;Parent=gene-O5D79_004751;anticodon=(pos:complement(40676..40678));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004751;product=tRNA-Asp DALFDJ020000037.1 tRNAscan-SE exon 40636 40712 . - . ID=exon-O5D79_004751-1;Parent=rna-O5D79_004751;anticodon=(pos:complement(40676..40678));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004751;product=tRNA-Asp DALFDJ020000037.1 tpg gene 40767 40882 . - . ID=gene-O5D79_004752;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=O5D79_004752 DALFDJ020000037.1 cmsearch rRNA 40767 40882 . - . ID=rna-O5D79_004752;Parent=gene-O5D79_004752;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_004752;product=5S ribosomal RNA DALFDJ020000037.1 cmsearch exon 40767 40882 . - . ID=exon-O5D79_004752-1;Parent=rna-O5D79_004752;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_004752;product=5S ribosomal RNA ##sequence-region DALFDJ020000038.1 1 39632 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000038.1 tpg region 1 39632 . + . ID=DALFDJ020000038.1:1..39632;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000038.1 tpg gene 291 947 . - . ID=gene-O5D79_004753;Name=O5D79_004753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004753 DALFDJ020000038.1 Protein Homology CDS 291 947 . - 0 ID=cds-HJH9166123.1;Parent=gene-O5D79_004753;Dbxref=NCBI_GP:HJH9166123.1;Name=HJH9166123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004702111.1;locus_tag=O5D79_004753;product=MgtC/SapB family protein;protein_id=HJH9166123.1;transl_table=11 DALFDJ020000038.1 tpg gene 1420 1647 . - . ID=gene-O5D79_004754;Name=O5D79_004754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004754 DALFDJ020000038.1 Protein Homology CDS 1420 1647 . - 0 ID=cds-HJH9166124.1;Parent=gene-O5D79_004754;Dbxref=NCBI_GP:HJH9166124.1;Name=HJH9166124.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750454.1;locus_tag=O5D79_004754;product=helix-turn-helix domain-containing protein;protein_id=HJH9166124.1;transl_table=11 DALFDJ020000038.1 tpg gene 1960 2343 . + . ID=gene-O5D79_004755;Name=O5D79_004755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004755 DALFDJ020000038.1 Protein Homology CDS 1960 2343 . + 0 ID=cds-HJH9166125.1;Parent=gene-O5D79_004755;Dbxref=NCBI_GP:HJH9166125.1;Name=HJH9166125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750452.1;locus_tag=O5D79_004755;product=hypothetical protein;protein_id=HJH9166125.1;transl_table=11 DALFDJ020000038.1 tpg gene 2594 3367 . - . ID=gene-O5D79_004756;Name=O5D79_004756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004756 DALFDJ020000038.1 Protein Homology CDS 2594 3367 . - 0 ID=cds-HJH9166126.1;Parent=gene-O5D79_004756;Dbxref=NCBI_GP:HJH9166126.1;Name=HJH9166126.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:NF014035.6;locus_tag=O5D79_004756;product=sulfite exporter TauE/SafE family protein;protein_id=HJH9166126.1;transl_table=11 DALFDJ020000038.1 tpg gene 3602 4375 . + . ID=gene-O5D79_004757;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=O5D79_004757 DALFDJ020000038.1 Protein Homology CDS 3602 4375 . + 0 ID=cds-HJH9166127.1;Parent=gene-O5D79_004757;Dbxref=NCBI_GP:HJH9166127.1;Name=HJH9166127.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750450.1;locus_tag=O5D79_004757;product=thiol:disulfide interchange protein DsbG;protein_id=HJH9166127.1;transl_table=11 DALFDJ020000038.1 tpg gene 4410 4751 . + . ID=gene-O5D79_004758;Name=O5D79_004758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004758 DALFDJ020000038.1 Protein Homology CDS 4410 4751 . + 0 ID=cds-HJH9166128.1;Parent=gene-O5D79_004758;Dbxref=NCBI_GP:HJH9166128.1;Name=HJH9166128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750449.1;locus_tag=O5D79_004758;product=DsrE family protein;protein_id=HJH9166128.1;transl_table=11 DALFDJ020000038.1 tpg pseudogene 5111 5188 . - . ID=gene-O5D79_004759;Name=O5D79_004759;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004759;pseudo=true DALFDJ020000038.1 Protein Homology CDS 5111 5188 . - 0 ID=cds-O5D79_004759;Parent=gene-O5D79_004759;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838536.1;locus_tag=O5D79_004759;product=VOC family protein;pseudo=true;transl_table=11 DALFDJ020000038.1 tpg gene 5661 8348 . - . ID=gene-O5D79_004760;Name=O5D79_004760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004760 DALFDJ020000038.1 Protein Homology CDS 5661 8348 . - 0 ID=cds-HJH9166129.1;Parent=gene-O5D79_004760;Dbxref=NCBI_GP:HJH9166129.1;Name=HJH9166129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001696166.1;locus_tag=O5D79_004760;product=autotransporter domain-containing protein;protein_id=HJH9166129.1;transl_table=11 DALFDJ020000038.1 tpg gene 8352 10757 . - . ID=gene-O5D79_004761;Name=O5D79_004761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004761 DALFDJ020000038.1 Protein Homology CDS 8352 10757 . - 0 ID=cds-HJH9166130.1;Parent=gene-O5D79_004761;Dbxref=NCBI_GP:HJH9166130.1;Name=HJH9166130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002955103.1;locus_tag=O5D79_004761;product=polysaccharide lyase 8 family protein;protein_id=HJH9166130.1;transl_table=11 DALFDJ020000038.1 tpg gene 10776 11780 . - . ID=gene-O5D79_004762;Name=O5D79_004762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004762 DALFDJ020000038.1 Protein Homology CDS 10776 11780 . - 0 ID=cds-HJH9166131.1;Parent=gene-O5D79_004762;Dbxref=NCBI_GP:HJH9166131.1;Name=HJH9166131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002955102.1;locus_tag=O5D79_004762;product=hypothetical protein;protein_id=HJH9166131.1;transl_table=11 DALFDJ020000038.1 tpg gene 11823 13289 . - . ID=gene-O5D79_004763;Name=O5D79_004763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004763 DALFDJ020000038.1 Protein Homology CDS 11823 13289 . - 0 ID=cds-HJH9166132.1;Parent=gene-O5D79_004763;Dbxref=NCBI_GP:HJH9166132.1;Name=HJH9166132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750446.1;locus_tag=O5D79_004763;product=DUF2264 domain-containing protein;protein_id=HJH9166132.1;transl_table=11 DALFDJ020000038.1 tpg gene 13314 14348 . - . ID=gene-O5D79_004764;Name=O5D79_004764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004764 DALFDJ020000038.1 Protein Homology CDS 13314 14348 . - 0 ID=cds-HJH9166133.1;Parent=gene-O5D79_004764;Dbxref=NCBI_GP:HJH9166133.1;Name=HJH9166133.1;Ontology_term=GO:0005975,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750445.1;locus_tag=O5D79_004764;product=glycoside hydrolase family 88/105 protein;protein_id=HJH9166133.1;transl_table=11 DALFDJ020000038.1 tpg gene 14427 14864 . - . ID=gene-O5D79_004765;Name=agaF;gbkey=Gene;gene=agaF;gene_biotype=protein_coding;locus_tag=O5D79_004765 DALFDJ020000038.1 Protein Homology CDS 14427 14864 . - 0 ID=cds-HJH9166134.1;Parent=gene-O5D79_004765;Dbxref=NCBI_GP:HJH9166134.1;Name=HJH9166134.1;gbkey=CDS;gene=agaF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001696170.1;locus_tag=O5D79_004765;product=PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;protein_id=HJH9166134.1;transl_table=11 DALFDJ020000038.1 tpg gene 14874 15740 . - . ID=gene-O5D79_004766;Name=O5D79_004766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004766 DALFDJ020000038.1 Protein Homology CDS 14874 15740 . - 0 ID=cds-HJH9166135.1;Parent=gene-O5D79_004766;Dbxref=NCBI_GP:HJH9166135.1;Name=HJH9166135.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001767853.1;locus_tag=O5D79_004766;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=HJH9166135.1;transl_table=11 DALFDJ020000038.1 tpg gene 15730 16503 . - . ID=gene-O5D79_004767;Name=agaW;gbkey=Gene;gene=agaW;gene_biotype=protein_coding;locus_tag=O5D79_004767 DALFDJ020000038.1 Protein Homology CDS 15730 16503 . - 0 ID=cds-HJH9166136.1;Parent=gene-O5D79_004767;Dbxref=NCBI_GP:HJH9166136.1;Name=HJH9166136.1;gbkey=CDS;gene=agaW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244210.1;locus_tag=O5D79_004767;product=PTS N-acetylgalactosamine transporter subunit IIC;protein_id=HJH9166136.1;transl_table=11 DALFDJ020000038.1 tpg gene 16520 16993 . - . ID=gene-O5D79_004768;Name=O5D79_004768;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004768 DALFDJ020000038.1 Protein Homology CDS 16520 16993 . - 0 ID=cds-HJH9166137.1;Parent=gene-O5D79_004768;Dbxref=NCBI_GP:HJH9166137.1;Name=HJH9166137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284309.1;locus_tag=O5D79_004768;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=HJH9166137.1;transl_table=11 DALFDJ020000038.1 tpg gene 17107 17895 . - . ID=gene-O5D79_004769;Name=O5D79_004769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004769 DALFDJ020000038.1 Protein Homology CDS 17107 17895 . - 0 ID=cds-HJH9166138.1;Parent=gene-O5D79_004769;Dbxref=NCBI_GP:HJH9166138.1;Name=HJH9166138.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750440.1;locus_tag=O5D79_004769;product=DeoR family transcriptional regulator;protein_id=HJH9166138.1;transl_table=11 DALFDJ020000038.1 tpg gene 19046 19369 . + . ID=gene-O5D79_004770;Name=O5D79_004770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004770 DALFDJ020000038.1 GeneMarkS-2+ CDS 19046 19369 . + 0 ID=cds-HJH9166139.1;Parent=gene-O5D79_004770;Dbxref=NCBI_GP:HJH9166139.1;Name=HJH9166139.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004770;product=hypothetical protein;protein_id=HJH9166139.1;transl_table=11 DALFDJ020000038.1 tpg gene 19559 19969 . + . ID=gene-O5D79_004771;Name=O5D79_004771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004771 DALFDJ020000038.1 Protein Homology CDS 19559 19969 . + 0 ID=cds-HJH9166140.1;Parent=gene-O5D79_004771;Dbxref=NCBI_GP:HJH9166140.1;Name=HJH9166140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750434.1;locus_tag=O5D79_004771;product=TIGR03757 family integrating conjugative element protein;protein_id=HJH9166140.1;transl_table=11 DALFDJ020000038.1 tpg gene 19966 20958 . + . ID=gene-O5D79_004772;Name=O5D79_004772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004772 DALFDJ020000038.1 Protein Homology CDS 19966 20958 . + 0 ID=cds-HJH9166141.1;Parent=gene-O5D79_004772;Dbxref=NCBI_GP:HJH9166141.1;Name=HJH9166141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750435.1;locus_tag=O5D79_004772;product=TIGR03756 family integrating conjugative element protein;protein_id=HJH9166141.1;transl_table=11 DALFDJ020000038.1 tpg gene 20967 22406 . + . ID=gene-O5D79_004773;Name=O5D79_004773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004773 DALFDJ020000038.1 Protein Homology CDS 20967 22406 . + 0 ID=cds-HJH9166142.1;Parent=gene-O5D79_004773;Dbxref=NCBI_GP:HJH9166142.1;Name=HJH9166142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000727404.1;locus_tag=O5D79_004773;product=integrating conjugative element protein;protein_id=HJH9166142.1;transl_table=11 DALFDJ020000038.1 tpg gene 22406 22780 . + . ID=gene-O5D79_004774;Name=O5D79_004774;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004774 DALFDJ020000038.1 GeneMarkS-2+ CDS 22406 22780 . + 0 ID=cds-HJH9166143.1;Parent=gene-O5D79_004774;Dbxref=NCBI_GP:HJH9166143.1;Name=HJH9166143.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004774;product=hypothetical protein;protein_id=HJH9166143.1;transl_table=11 DALFDJ020000038.1 tpg gene 22791 24314 . + . ID=gene-O5D79_004775;Name=O5D79_004775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004775 DALFDJ020000038.1 Protein Homology CDS 22791 24314 . + 0 ID=cds-HJH9166144.1;Parent=gene-O5D79_004775;Dbxref=NCBI_GP:HJH9166144.1;Name=HJH9166144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105560.1;locus_tag=O5D79_004775;product=conjugal transfer protein TraG N-terminal domain-containing protein;protein_id=HJH9166144.1;transl_table=11 DALFDJ020000038.1 tpg gene 24365 24775 . - . ID=gene-O5D79_004776;Name=O5D79_004776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004776 DALFDJ020000038.1 Protein Homology CDS 24365 24775 . - 0 ID=cds-HJH9166145.1;Parent=gene-O5D79_004776;Dbxref=NCBI_GP:HJH9166145.1;Name=HJH9166145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064063.1;locus_tag=O5D79_004776;product=hypothetical protein;protein_id=HJH9166145.1;transl_table=11 DALFDJ020000038.1 tpg gene 25073 25363 . + . ID=gene-O5D79_004777;Name=O5D79_004777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004777 DALFDJ020000038.1 Protein Homology CDS 25073 25363 . + 0 ID=cds-HJH9166146.1;Parent=gene-O5D79_004777;Dbxref=NCBI_GP:HJH9166146.1;Name=HJH9166146.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017845.6;locus_tag=O5D79_004777;product=PerC family transcriptional regulator;protein_id=HJH9166146.1;transl_table=11 DALFDJ020000038.1 tpg gene 25387 25737 . + . ID=gene-O5D79_004778;Name=O5D79_004778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004778 DALFDJ020000038.1 GeneMarkS-2+ CDS 25387 25737 . + 0 ID=cds-HJH9166147.1;Parent=gene-O5D79_004778;Dbxref=NCBI_GP:HJH9166147.1;Name=HJH9166147.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004778;product=hypothetical protein;protein_id=HJH9166147.1;transl_table=11 DALFDJ020000038.1 tpg gene 25982 26305 . - . ID=gene-O5D79_004779;Name=O5D79_004779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004779 DALFDJ020000038.1 Protein Homology CDS 25982 26305 . - 0 ID=cds-HJH9166148.1;Parent=gene-O5D79_004779;Dbxref=NCBI_GP:HJH9166148.1;Name=HJH9166148.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018214.6;locus_tag=O5D79_004779;product=DUF1090 domain-containing protein;protein_id=HJH9166148.1;transl_table=11 DALFDJ020000038.1 tpg gene 26295 26705 . + . ID=gene-O5D79_004780;Name=O5D79_004780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004780 DALFDJ020000038.1 GeneMarkS-2+ CDS 26295 26705 . + 0 ID=cds-HJH9166149.1;Parent=gene-O5D79_004780;Dbxref=NCBI_GP:HJH9166149.1;Name=HJH9166149.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004780;product=YncE family protein;protein_id=HJH9166149.1;transl_table=11 DALFDJ020000038.1 tpg gene 26702 26914 . + . ID=gene-O5D79_004781;Name=O5D79_004781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004781 DALFDJ020000038.1 GeneMarkS-2+ CDS 26702 26914 . + 0 ID=cds-HJH9166150.1;Parent=gene-O5D79_004781;Dbxref=NCBI_GP:HJH9166150.1;Name=HJH9166150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004781;product=hypothetical protein;protein_id=HJH9166150.1;transl_table=11 DALFDJ020000038.1 tpg pseudogene 27005 27178 . + . ID=gene-O5D79_004782;Name=O5D79_004782;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004782;pseudo=true DALFDJ020000038.1 Protein Homology CDS 27005 27178 . + 0 ID=cds-O5D79_004782;Parent=gene-O5D79_004782;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152817.1;locus_tag=O5D79_004782;product=IS481 family transposase;pseudo=true;transl_table=11 DALFDJ020000038.1 tpg gene 27211 27810 . - . ID=gene-O5D79_004783;Name=O5D79_004783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004783 DALFDJ020000038.1 Protein Homology CDS 27211 27810 . - 0 ID=cds-HJH9166151.1;Parent=gene-O5D79_004783;Dbxref=NCBI_GP:HJH9166151.1;Name=HJH9166151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014593738.1;locus_tag=O5D79_004783;product=NlpC/P60 family protein;protein_id=HJH9166151.1;transl_table=11 DALFDJ020000038.1 tpg pseudogene 28168 28272 . - . ID=gene-O5D79_004784;Name=O5D79_004784;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004784;pseudo=true DALFDJ020000038.1 Protein Homology CDS 28168 28272 . - 0 ID=cds-O5D79_004784;Parent=gene-O5D79_004784;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001889101.1;locus_tag=O5D79_004784;product=IS481 family transposase;pseudo=true;transl_table=11 DALFDJ020000038.1 tpg gene 28299 29099 . - . ID=gene-O5D79_004785;Name=O5D79_004785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004785 DALFDJ020000038.1 Protein Homology CDS 28299 29099 . - 0 ID=cds-HJH9166152.1;Parent=gene-O5D79_004785;Dbxref=NCBI_GP:HJH9166152.1;Name=HJH9166152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750424.1;locus_tag=O5D79_004785;product=transcriptional regulator;protein_id=HJH9166152.1;transl_table=11 DALFDJ020000038.1 tpg gene 29086 29598 . - . ID=gene-O5D79_004786;Name=O5D79_004786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004786 DALFDJ020000038.1 Protein Homology CDS 29086 29598 . - 0 ID=cds-HJH9166153.1;Parent=gene-O5D79_004786;Dbxref=NCBI_GP:HJH9166153.1;Name=HJH9166153.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727965.1;locus_tag=O5D79_004786;product=CaiF/GrlA family transcriptional regulator;protein_id=HJH9166153.1;transl_table=11 DALFDJ020000038.1 tpg gene 29727 30953 . - . ID=gene-O5D79_004787;Name=O5D79_004787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004787 DALFDJ020000038.1 Protein Homology CDS 29727 30953 . - 0 ID=cds-HJH9166154.1;Parent=gene-O5D79_004787;Dbxref=NCBI_GP:HJH9166154.1;Name=HJH9166154.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.6;locus_tag=O5D79_004787;product=fimbrial protein;protein_id=HJH9166154.1;transl_table=11 DALFDJ020000038.1 tpg gene 30946 31698 . - . ID=gene-O5D79_004788;Name=O5D79_004788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004788 DALFDJ020000038.1 Protein Homology CDS 30946 31698 . - 0 ID=cds-HJH9166155.1;Parent=gene-O5D79_004788;Dbxref=NCBI_GP:HJH9166155.1;Name=HJH9166155.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002952992.1;locus_tag=O5D79_004788;product=fimbria/pilus periplasmic chaperone;protein_id=HJH9166155.1;transl_table=11 DALFDJ020000038.1 tpg gene 31773 34262 . - . ID=gene-O5D79_004789;Name=stdB;gbkey=Gene;gene=stdB;gene_biotype=protein_coding;locus_tag=O5D79_004789 DALFDJ020000038.1 Protein Homology CDS 31773 34262 . - 0 ID=cds-HJH9166156.1;Parent=gene-O5D79_004789;Dbxref=NCBI_GP:HJH9166156.1;Name=HJH9166156.1;gbkey=CDS;gene=stdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461945.1;locus_tag=O5D79_004789;product=fimbrial outer membrane usher protein StdB;protein_id=HJH9166156.1;transl_table=11 DALFDJ020000038.1 tpg gene 34451 35056 . - . ID=gene-O5D79_004790;Name=O5D79_004790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004790 DALFDJ020000038.1 Protein Homology CDS 34451 35056 . - 0 ID=cds-HJH9166157.1;Parent=gene-O5D79_004790;Dbxref=NCBI_GP:HJH9166157.1;Name=HJH9166157.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001244654.1;locus_tag=O5D79_004790;product=fimbrial protein;protein_id=HJH9166157.1;transl_table=11 DALFDJ020000038.1 tpg pseudogene 35758 36087 . - . ID=gene-O5D79_004791;Name=O5D79_004791;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004791;pseudo=true DALFDJ020000038.1 Protein Homology CDS 35758 36087 . - 0 ID=cds-O5D79_004791;Parent=gene-O5D79_004791;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447023.1;locus_tag=O5D79_004791;product=IS21 family transposase;pseudo=true;transl_table=11 DALFDJ020000038.1 tpg pseudogene 36110 36226 . + . ID=gene-O5D79_004792;Name=O5D79_004792;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004792;pseudo=true DALFDJ020000038.1 Protein Homology CDS 36110 36226 . + 0 ID=cds-O5D79_004792;Parent=gene-O5D79_004792;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611384.1;locus_tag=O5D79_004792;product=transposase;pseudo=true;transl_table=11 DALFDJ020000038.1 tpg gene 36677 37687 . - . ID=gene-O5D79_004793;Name=O5D79_004793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004793 DALFDJ020000038.1 Protein Homology CDS 36677 37687 . - 0 ID=cds-HJH9166158.1;Parent=gene-O5D79_004793;Dbxref=NCBI_GP:HJH9166158.1;Name=HJH9166158.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000487120.1;locus_tag=O5D79_004793;product=IS110 family transposase;protein_id=HJH9166158.1;transl_table=11 DALFDJ020000038.1 tpg pseudogene 37692 38249 . + . ID=gene-O5D79_004794;Name=O5D79_004794;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004794;pseudo=true DALFDJ020000038.1 Protein Homology CDS 37692 38249 . + 0 ID=cds-O5D79_004794;Parent=gene-O5D79_004794;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=O5D79_004794;product=IS3 family transposase;pseudo=true;transl_table=11 DALFDJ020000038.1 tpg gene 38461 39015 . + . ID=gene-O5D79_004795;Name=O5D79_004795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004795 DALFDJ020000038.1 GeneMarkS-2+ CDS 38461 39015 . + 0 ID=cds-HJH9166159.1;Parent=gene-O5D79_004795;Dbxref=NCBI_GP:HJH9166159.1;Name=HJH9166159.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004795;product=hypothetical protein;protein_id=HJH9166159.1;transl_table=11 DALFDJ020000038.1 tpg gene 39082 39632 . + . ID=gene-O5D79_004796;Name=O5D79_004796;end_range=39632,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004796;partial=true DALFDJ020000038.1 GeneMarkS-2+ CDS 39082 39632 . + 0 ID=cds-HJH9166160.1;Parent=gene-O5D79_004796;Dbxref=NCBI_GP:HJH9166160.1;Name=HJH9166160.1;end_range=39632,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004796;partial=true;product=hypothetical protein;protein_id=HJH9166160.1;transl_table=11 ##sequence-region DALFDJ020000039.1 1 36366 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000039.1 tpg region 1 36366 . + . ID=DALFDJ020000039.1:1..36366;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000039.1 tpg gene 26 3550 . - . ID=gene-O5D79_004797;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=O5D79_004797 DALFDJ020000039.1 Protein Homology CDS 26 3550 . - 0 ID=cds-HJH9166161.1;Parent=gene-O5D79_004797;Dbxref=NCBI_GP:HJH9166161.1;Name=HJH9166161.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460610.1;locus_tag=O5D79_004797;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=HJH9166161.1;transl_table=11 DALFDJ020000039.1 tpg gene 3611 3910 . - . ID=gene-O5D79_004798;Name=O5D79_004798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004798 DALFDJ020000039.1 Protein Homology CDS 3611 3910 . - 0 ID=cds-HJH9166162.1;Parent=gene-O5D79_004798;Dbxref=NCBI_GP:HJH9166162.1;Name=HJH9166162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460609.1;locus_tag=O5D79_004798;product=reverse transcriptase;protein_id=HJH9166162.1;transl_table=11 DALFDJ020000039.1 tpg gene 3826 4092 . + . ID=gene-O5D79_004799;Name=O5D79_004799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004799 DALFDJ020000039.1 Protein Homology CDS 3826 4092 . + 0 ID=cds-HJH9166163.1;Parent=gene-O5D79_004799;Dbxref=NCBI_GP:HJH9166163.1;Name=HJH9166163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=O5D79_004799;product=putative hemolysin;protein_id=HJH9166163.1;transl_table=11 DALFDJ020000039.1 tpg gene 4136 4546 . - . ID=gene-O5D79_004800;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=O5D79_004800 DALFDJ020000039.1 Protein Homology CDS 4136 4546 . - 0 ID=cds-HJH9166164.1;Parent=gene-O5D79_004800;Dbxref=NCBI_GP:HJH9166164.1;Name=HJH9166164.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460607.1;locus_tag=O5D79_004800;product=heat shock protein HslJ;protein_id=HJH9166164.1;transl_table=11 DALFDJ020000039.1 tpg gene 4657 5646 . - . ID=gene-O5D79_004801;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=O5D79_004801 DALFDJ020000039.1 Protein Homology CDS 4657 5646 . - 0 ID=cds-HJH9166165.1;Parent=gene-O5D79_004801;Dbxref=NCBI_GP:HJH9166165.1;Name=HJH9166165.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460606.1;locus_tag=O5D79_004801;product=D-lactate dehydrogenase;protein_id=HJH9166165.1;transl_table=11 DALFDJ020000039.1 tpg gene 5886 8522 . + . ID=gene-O5D79_004802;Name=O5D79_004802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004802 DALFDJ020000039.1 Protein Homology CDS 5886 8522 . + 0 ID=cds-HJH9166166.1;Parent=gene-O5D79_004802;Dbxref=NCBI_GP:HJH9166166.1;Name=HJH9166166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460605.1;locus_tag=O5D79_004802;product=YdbH family protein;protein_id=HJH9166166.1;transl_table=11 DALFDJ020000039.1 tpg gene 8522 8713 . + . ID=gene-O5D79_004803;Name=O5D79_004803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004803 DALFDJ020000039.1 Protein Homology CDS 8522 8713 . + 0 ID=cds-HJH9166167.1;Parent=gene-O5D79_004803;Dbxref=NCBI_GP:HJH9166167.1;Name=HJH9166167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460604.1;locus_tag=O5D79_004803;product=YnbE family lipoprotein;protein_id=HJH9166167.1;transl_table=11 DALFDJ020000039.1 tpg gene 8721 9044 . + . ID=gene-O5D79_004804;Name=O5D79_004804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004804 DALFDJ020000039.1 Protein Homology CDS 8721 9044 . + 0 ID=cds-HJH9166168.1;Parent=gene-O5D79_004804;Dbxref=NCBI_GP:HJH9166168.1;Name=HJH9166168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460603.1;locus_tag=O5D79_004804;product=YdbL family protein;protein_id=HJH9166168.1;transl_table=11 DALFDJ020000039.1 tpg gene 9187 9636 . + . ID=gene-O5D79_004805;Name=O5D79_004805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004805 DALFDJ020000039.1 Protein Homology CDS 9187 9636 . + 0 ID=cds-HJH9166169.1;Parent=gene-O5D79_004805;Dbxref=NCBI_GP:HJH9166169.1;Name=HJH9166169.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460602.1;locus_tag=O5D79_004805;product=GFA family protein;protein_id=HJH9166169.1;transl_table=11 DALFDJ020000039.1 tpg gene 9633 10238 . - . ID=gene-O5D79_004806;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=O5D79_004806 DALFDJ020000039.1 Protein Homology CDS 9633 10238 . - 0 ID=cds-HJH9166170.1;Parent=gene-O5D79_004806;Dbxref=NCBI_GP:HJH9166170.1;Name=HJH9166170.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460601.1;locus_tag=O5D79_004806;product=FMN-dependent NADH-azoreductase;protein_id=HJH9166170.1;transl_table=11 DALFDJ020000039.1 tpg gene 10439 14341 . + . ID=gene-O5D79_004807;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=O5D79_004807 DALFDJ020000039.1 Protein Homology CDS 10439 14341 . + 0 ID=cds-HJH9166171.1;Parent=gene-O5D79_004807;Dbxref=NCBI_GP:HJH9166171.1;Name=HJH9166171.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460600.3;locus_tag=O5D79_004807;product=ATP-dependent RNA helicase HrpA;protein_id=HJH9166171.1;transl_table=11 DALFDJ020000039.1 tpg gene 14405 15205 . + . ID=gene-O5D79_004808;Name=O5D79_004808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004808 DALFDJ020000039.1 Protein Homology CDS 14405 15205 . + 0 ID=cds-HJH9166172.1;Parent=gene-O5D79_004808;Dbxref=NCBI_GP:HJH9166172.1;Name=HJH9166172.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460599.1;locus_tag=O5D79_004808;product=YdcF family protein;protein_id=HJH9166172.1;transl_table=11 DALFDJ020000039.1 tpg gene 15322 15852 . + . ID=gene-O5D79_004809;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=O5D79_004809 DALFDJ020000039.1 Protein Homology CDS 15322 15852 . + 0 ID=cds-HJH9166173.1;Parent=gene-O5D79_004809;Dbxref=NCBI_GP:HJH9166173.1;Name=HJH9166173.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460598.1;locus_tag=O5D79_004809;product=cytochrome b561;protein_id=HJH9166173.1;transl_table=11 DALFDJ020000039.1 tpg gene 16123 16785 . - . ID=gene-O5D79_004810;Name=O5D79_004810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004810 DALFDJ020000039.1 Protein Homology CDS 16123 16785 . - 0 ID=cds-HJH9166174.1;Parent=gene-O5D79_004810;Dbxref=NCBI_GP:HJH9166174.1;Name=HJH9166174.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576082.1;locus_tag=O5D79_004810;product=class I SAM-dependent methyltransferase;protein_id=HJH9166174.1;transl_table=11 DALFDJ020000039.1 tpg gene 17249 18799 . - . ID=gene-O5D79_004811;Name=O5D79_004811;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004811 DALFDJ020000039.1 Protein Homology CDS 17249 18799 . - 0 ID=cds-HJH9166175.1;Parent=gene-O5D79_004811;Dbxref=NCBI_GP:HJH9166175.1;Name=HJH9166175.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460596.1;locus_tag=O5D79_004811;product=glycosyltransferase family 39 protein;protein_id=HJH9166175.1;transl_table=11 DALFDJ020000039.1 tpg gene 18936 19616 . - . ID=gene-O5D79_004812;Name=O5D79_004812;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004812 DALFDJ020000039.1 Protein Homology CDS 18936 19616 . - 0 ID=cds-HJH9166176.1;Parent=gene-O5D79_004812;Dbxref=NCBI_GP:HJH9166176.1;Name=HJH9166176.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460595.1;locus_tag=O5D79_004812;product=amino acid ABC transporter permease;protein_id=HJH9166176.1;transl_table=11 DALFDJ020000039.1 tpg gene 19613 20344 . - . ID=gene-O5D79_004813;Name=O5D79_004813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004813 DALFDJ020000039.1 Protein Homology CDS 19613 20344 . - 0 ID=cds-HJH9166177.1;Parent=gene-O5D79_004813;Dbxref=NCBI_GP:HJH9166177.1;Name=HJH9166177.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460594.1;locus_tag=O5D79_004813;product=amino acid ABC transporter ATP-binding protein;protein_id=HJH9166177.1;transl_table=11 DALFDJ020000039.1 tpg gene 20369 21016 . - . ID=gene-O5D79_004814;Name=O5D79_004814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004814 DALFDJ020000039.1 Protein Homology CDS 20369 21016 . - 0 ID=cds-HJH9166178.1;Parent=gene-O5D79_004814;Dbxref=NCBI_GP:HJH9166178.1;Name=HJH9166178.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460593.1;locus_tag=O5D79_004814;product=amino acid ABC transporter permease;protein_id=HJH9166178.1;transl_table=11 DALFDJ020000039.1 tpg gene 21023 21784 . - . ID=gene-O5D79_004815;Name=O5D79_004815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004815 DALFDJ020000039.1 Protein Homology CDS 21023 21784 . - 0 ID=cds-HJH9166179.1;Parent=gene-O5D79_004815;Dbxref=NCBI_GP:HJH9166179.1;Name=HJH9166179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460592.1;locus_tag=O5D79_004815;product=transporter substrate-binding domain-containing protein;protein_id=HJH9166179.1;transl_table=11 DALFDJ020000039.1 tpg gene 22691 23035 . + . ID=gene-O5D79_004816;Name=O5D79_004816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004816 DALFDJ020000039.1 Protein Homology CDS 22691 23035 . + 0 ID=cds-HJH9166180.1;Parent=gene-O5D79_004816;Dbxref=NCBI_GP:HJH9166180.1;Name=HJH9166180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460591.1;locus_tag=O5D79_004816;product=DUF1294 domain-containing protein;protein_id=HJH9166180.1;transl_table=11 DALFDJ020000039.1 tpg gene 23156 24382 . - . ID=gene-O5D79_004817;Name=sseJ;gbkey=Gene;gene=sseJ;gene_biotype=protein_coding;locus_tag=O5D79_004817 DALFDJ020000039.1 Protein Homology CDS 23156 24382 . - 0 ID=cds-HJH9166181.1;Parent=gene-O5D79_004817;Dbxref=NCBI_GP:HJH9166181.1;Name=HJH9166181.1;gbkey=CDS;gene=sseJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460590.1;locus_tag=O5D79_004817;product=SPI-2 type III secretion system effector SseJ;protein_id=HJH9166181.1;transl_table=11 DALFDJ020000039.1 tpg gene 24808 25524 . + . ID=gene-O5D79_004818;Name=O5D79_004818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004818 DALFDJ020000039.1 Protein Homology CDS 24808 25524 . + 0 ID=cds-HJH9166182.1;Parent=gene-O5D79_004818;Dbxref=NCBI_GP:HJH9166182.1;Name=HJH9166182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460589.1;locus_tag=O5D79_004818;product=hypothetical protein;protein_id=HJH9166182.1;transl_table=11 DALFDJ020000039.1 tpg gene 25653 26054 . - . ID=gene-O5D79_004819;Name=steB;gbkey=Gene;gene=steB;gene_biotype=protein_coding;locus_tag=O5D79_004819 DALFDJ020000039.1 Protein Homology CDS 25653 26054 . - 0 ID=cds-HJH9166183.1;Parent=gene-O5D79_004819;Dbxref=NCBI_GP:HJH9166183.1;Name=HJH9166183.1;gbkey=CDS;gene=steB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448047.1;locus_tag=O5D79_004819;product=type III secretion system effector SteB;protein_id=HJH9166183.1;transl_table=11 DALFDJ020000039.1 tpg gene 26603 27874 . - . ID=gene-O5D79_004820;Name=O5D79_004820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004820 DALFDJ020000039.1 Protein Homology CDS 26603 27874 . - 0 ID=cds-HJH9166184.1;Parent=gene-O5D79_004820;Dbxref=NCBI_GP:HJH9166184.1;Name=HJH9166184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132785.1;locus_tag=O5D79_004820;product=Arm DNA-binding domain-containing protein;protein_id=HJH9166184.1;transl_table=11 DALFDJ020000039.1 tpg gene 27874 28086 . - . ID=gene-O5D79_004821;Name=xisR;gbkey=Gene;gene=xisR;gene_biotype=protein_coding;locus_tag=O5D79_004821 DALFDJ020000039.1 Protein Homology CDS 27874 28086 . - 0 ID=cds-HJH9166185.1;Parent=gene-O5D79_004821;Dbxref=NCBI_GP:HJH9166185.1;Name=HJH9166185.1;gbkey=CDS;gene=xisR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884030.1;locus_tag=O5D79_004821;product=excisionase family protein;protein_id=HJH9166185.1;transl_table=11 DALFDJ020000039.1 tpg gene 28150 28371 . - . ID=gene-O5D79_004822;Name=O5D79_004822;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004822 DALFDJ020000039.1 GeneMarkS-2+ CDS 28150 28371 . - 0 ID=cds-HJH9166186.1;Parent=gene-O5D79_004822;Dbxref=NCBI_GP:HJH9166186.1;Name=HJH9166186.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004822;product=hypothetical protein;protein_id=HJH9166186.1;transl_table=11 DALFDJ020000039.1 tpg gene 28816 29319 . - . ID=gene-O5D79_004823;Name=O5D79_004823;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004823 DALFDJ020000039.1 Protein Homology CDS 28816 29319 . - 0 ID=cds-HJH9166187.1;Parent=gene-O5D79_004823;Dbxref=NCBI_GP:HJH9166187.1;Name=HJH9166187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016060751.1;locus_tag=O5D79_004823;product=siphovirus Gp157 family protein;protein_id=HJH9166187.1;transl_table=11 DALFDJ020000039.1 tpg gene 29316 31655 . - . ID=gene-O5D79_004824;Name=O5D79_004824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004824 DALFDJ020000039.1 Protein Homology CDS 29316 31655 . - 0 ID=cds-HJH9166188.1;Parent=gene-O5D79_004824;Dbxref=NCBI_GP:HJH9166188.1;Name=HJH9166188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014544047.1;locus_tag=O5D79_004824;product=exodeoxyribonuclease VIII;protein_id=HJH9166188.1;transl_table=11 DALFDJ020000039.1 tpg gene 31666 31962 . - . ID=gene-O5D79_004825;Name=O5D79_004825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004825 DALFDJ020000039.1 Protein Homology CDS 31666 31962 . - 0 ID=cds-HJH9166189.1;Parent=gene-O5D79_004825;Dbxref=NCBI_GP:HJH9166189.1;Name=HJH9166189.1;Ontology_term=GO:0060703;gbkey=CDS;go_function=deoxyribonuclease inhibitor activity|0060703||IEA;inference=COORDINATES: protein motif:HMM:NF017841.6;locus_tag=O5D79_004825;product=host-nuclease inhibitor Gam family protein;protein_id=HJH9166189.1;transl_table=11 DALFDJ020000039.1 tpg gene 32006 32341 . - . ID=gene-O5D79_004826;Name=O5D79_004826;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004826 DALFDJ020000039.1 GeneMarkS-2+ CDS 32006 32341 . - 0 ID=cds-HJH9166190.1;Parent=gene-O5D79_004826;Dbxref=NCBI_GP:HJH9166190.1;Name=HJH9166190.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004826;product=hypothetical protein;protein_id=HJH9166190.1;transl_table=11 DALFDJ020000039.1 tpg gene 32408 32614 . - . ID=gene-O5D79_004827;Name=O5D79_004827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004827 DALFDJ020000039.1 Protein Homology CDS 32408 32614 . - 0 ID=cds-HJH9166191.1;Parent=gene-O5D79_004827;Dbxref=NCBI_GP:HJH9166191.1;Name=HJH9166191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000682660.1;locus_tag=O5D79_004827;product=cell division inhibitor protein;protein_id=HJH9166191.1;transl_table=11 DALFDJ020000039.1 tpg gene 32637 32969 . - . ID=gene-O5D79_004828;Name=O5D79_004828;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004828 DALFDJ020000039.1 GeneMarkS-2+ CDS 32637 32969 . - 0 ID=cds-HJH9166192.1;Parent=gene-O5D79_004828;Dbxref=NCBI_GP:HJH9166192.1;Name=HJH9166192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004828;product=hypothetical protein;protein_id=HJH9166192.1;transl_table=11 DALFDJ020000039.1 tpg gene 33189 33563 . - . ID=gene-O5D79_004829;Name=O5D79_004829;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004829 DALFDJ020000039.1 GeneMarkS-2+ CDS 33189 33563 . - 0 ID=cds-HJH9166193.1;Parent=gene-O5D79_004829;Dbxref=NCBI_GP:HJH9166193.1;Name=HJH9166193.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004829;product=hypothetical protein;protein_id=HJH9166193.1;transl_table=11 DALFDJ020000039.1 tpg gene 33556 33876 . - . ID=gene-O5D79_004830;Name=O5D79_004830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004830 DALFDJ020000039.1 GeneMarkS-2+ CDS 33556 33876 . - 0 ID=cds-HJH9166194.1;Parent=gene-O5D79_004830;Dbxref=NCBI_GP:HJH9166194.1;Name=HJH9166194.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004830;product=hypothetical protein;protein_id=HJH9166194.1;transl_table=11 DALFDJ020000039.1 tpg gene 33918 34322 . - . ID=gene-O5D79_004831;Name=O5D79_004831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004831 DALFDJ020000039.1 Protein Homology CDS 33918 34322 . - 0 ID=cds-HJH9166195.1;Parent=gene-O5D79_004831;Dbxref=NCBI_GP:HJH9166195.1;Name=HJH9166195.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192921.1;locus_tag=O5D79_004831;product=helix-turn-helix domain-containing protein;protein_id=HJH9166195.1;transl_table=11 DALFDJ020000039.1 tpg gene 34410 34640 . + . ID=gene-O5D79_004832;Name=O5D79_004832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004832 DALFDJ020000039.1 Protein Homology CDS 34410 34640 . + 0 ID=cds-HJH9166196.1;Parent=gene-O5D79_004832;Dbxref=NCBI_GP:HJH9166196.1;Name=HJH9166196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728351.1;locus_tag=O5D79_004832;product=Cro/CI family transcriptional regulator;protein_id=HJH9166196.1;transl_table=11 DALFDJ020000039.1 tpg gene 34618 35100 . + . ID=gene-O5D79_004833;Name=O5D79_004833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004833 DALFDJ020000039.1 Protein Homology CDS 34618 35100 . + 0 ID=cds-HJH9166197.1;Parent=gene-O5D79_004833;Dbxref=NCBI_GP:HJH9166197.1;Name=HJH9166197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728352.1;locus_tag=O5D79_004833;product=toxin YdaT family protein;protein_id=HJH9166197.1;transl_table=11 DALFDJ020000039.1 tpg gene 35093 35947 . + . ID=gene-O5D79_004834;Name=O5D79_004834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004834 DALFDJ020000039.1 Protein Homology CDS 35093 35947 . + 0 ID=cds-HJH9166198.1;Parent=gene-O5D79_004834;Dbxref=NCBI_GP:HJH9166198.1;Name=HJH9166198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002443619.1;locus_tag=O5D79_004834;product=replication protein;protein_id=HJH9166198.1;transl_table=11 DALFDJ020000039.1 tpg gene 35970 36366 . + . ID=gene-O5D79_004835;Name=O5D79_004835;end_range=36366,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004835;partial=true DALFDJ020000039.1 Protein Homology CDS 35970 36366 . + 0 ID=cds-HJH9166199.1;Parent=gene-O5D79_004835;Dbxref=NCBI_GP:HJH9166199.1;Name=HJH9166199.1;end_range=36366,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750230.1;locus_tag=O5D79_004835;partial=true;product=hypothetical protein;protein_id=HJH9166199.1;transl_table=11 ##sequence-region DALFDJ020000040.1 1 32891 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000040.1 tpg region 1 32891 . + . ID=DALFDJ020000040.1:1..32891;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000040.1 tpg gene 1 235 . - . ID=gene-O5D79_004836;Name=O5D79_004836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004836;partial=true;start_range=.,1 DALFDJ020000040.1 GeneMarkS-2+ CDS 1 235 . - 0 ID=cds-HJH9166200.1;Parent=gene-O5D79_004836;Dbxref=NCBI_GP:HJH9166200.1;Name=HJH9166200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004836;partial=true;product=hypothetical protein;protein_id=HJH9166200.1;start_range=.,1;transl_table=11 DALFDJ020000040.1 tpg gene 547 1461 . + . ID=gene-O5D79_004837;Name=O5D79_004837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004837 DALFDJ020000040.1 Protein Homology CDS 547 1461 . + 0 ID=cds-HJH9166201.1;Parent=gene-O5D79_004837;Dbxref=NCBI_GP:HJH9166201.1;Name=HJH9166201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016157213.1;locus_tag=O5D79_004837;product=hypothetical protein;protein_id=HJH9166201.1;transl_table=11 DALFDJ020000040.1 tpg gene 1591 1782 . + . ID=gene-O5D79_004838;Name=O5D79_004838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004838 DALFDJ020000040.1 Protein Homology CDS 1591 1782 . + 0 ID=cds-HJH9166202.1;Parent=gene-O5D79_004838;Dbxref=NCBI_GP:HJH9166202.1;Name=HJH9166202.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012541174.1;locus_tag=O5D79_004838;product=AlpA family transcriptional regulator;protein_id=HJH9166202.1;transl_table=11 DALFDJ020000040.1 tpg gene 1832 2413 . + . ID=gene-O5D79_004839;Name=O5D79_004839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004839 DALFDJ020000040.1 Protein Homology CDS 1832 2413 . + 0 ID=cds-HJH9166203.1;Parent=gene-O5D79_004839;Dbxref=NCBI_GP:HJH9166203.1;Name=HJH9166203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012769227.1;locus_tag=O5D79_004839;product=DUF2857 domain-containing protein;protein_id=HJH9166203.1;transl_table=11 DALFDJ020000040.1 tpg gene 2406 2621 . + . ID=gene-O5D79_004840;Name=O5D79_004840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004840 DALFDJ020000040.1 Protein Homology CDS 2406 2621 . + 0 ID=cds-HJH9166204.1;Parent=gene-O5D79_004840;Dbxref=NCBI_GP:HJH9166204.1;Name=HJH9166204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696811.1;locus_tag=O5D79_004840;product=TraR/DksA family transcriptional regulator;protein_id=HJH9166204.1;transl_table=11 DALFDJ020000040.1 tpg gene 2838 3059 . + . ID=gene-O5D79_004841;Name=O5D79_004841;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004841 DALFDJ020000040.1 Protein Homology CDS 2838 3059 . + 0 ID=cds-HJH9166205.1;Parent=gene-O5D79_004841;Dbxref=NCBI_GP:HJH9166205.1;Name=HJH9166205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229955.1;locus_tag=O5D79_004841;product=hypothetical protein;protein_id=HJH9166205.1;transl_table=11 DALFDJ020000040.1 tpg gene 3075 3767 . + . ID=gene-O5D79_004842;Name=O5D79_004842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004842 DALFDJ020000040.1 Protein Homology CDS 3075 3767 . + 0 ID=cds-HJH9166206.1;Parent=gene-O5D79_004842;Dbxref=NCBI_GP:HJH9166206.1;Name=HJH9166206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015874990.1;locus_tag=O5D79_004842;product=lytic transglycosylase domain-containing protein;protein_id=HJH9166206.1;transl_table=11 DALFDJ020000040.1 tpg gene 3764 4054 . + . ID=gene-O5D79_004843;Name=O5D79_004843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004843 DALFDJ020000040.1 Protein Homology CDS 3764 4054 . + 0 ID=cds-HJH9166207.1;Parent=gene-O5D79_004843;Dbxref=NCBI_GP:HJH9166207.1;Name=HJH9166207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012885319.1;locus_tag=O5D79_004843;product=TrbC/VirB2 family protein;protein_id=HJH9166207.1;transl_table=11 DALFDJ020000040.1 tpg gene 4067 6805 . + . ID=gene-O5D79_004844;Name=O5D79_004844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004844 DALFDJ020000040.1 Protein Homology CDS 4067 6805 . + 0 ID=cds-HJH9166208.1;Parent=gene-O5D79_004844;Dbxref=NCBI_GP:HJH9166208.1;Name=HJH9166208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227778.1;locus_tag=O5D79_004844;product=VirB3 family type IV secretion system protein;protein_id=HJH9166208.1;transl_table=11 DALFDJ020000040.1 tpg gene 6825 7532 . + . ID=gene-O5D79_004845;Name=O5D79_004845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004845 DALFDJ020000040.1 Protein Homology CDS 6825 7532 . + 0 ID=cds-HJH9166209.1;Parent=gene-O5D79_004845;Dbxref=NCBI_GP:HJH9166209.1;Name=HJH9166209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010617328.1;locus_tag=O5D79_004845;product=type IV secretion system protein;protein_id=HJH9166209.1;transl_table=11 DALFDJ020000040.1 tpg gene 7544 7768 . + . ID=gene-O5D79_004846;Name=O5D79_004846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004846 DALFDJ020000040.1 Protein Homology CDS 7544 7768 . + 0 ID=cds-HJH9166210.1;Parent=gene-O5D79_004846;Dbxref=NCBI_GP:HJH9166210.1;Name=HJH9166210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000720509.1;locus_tag=O5D79_004846;product=EexN family lipoprotein;protein_id=HJH9166210.1;transl_table=11 DALFDJ020000040.1 tpg gene 7780 8856 . + . ID=gene-O5D79_004847;Name=O5D79_004847;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004847 DALFDJ020000040.1 Protein Homology CDS 7780 8856 . + 0 ID=cds-HJH9166211.1;Parent=gene-O5D79_004847;Dbxref=NCBI_GP:HJH9166211.1;Name=HJH9166211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012815871.1;locus_tag=O5D79_004847;product=type IV secretion system protein;protein_id=HJH9166211.1;transl_table=11 DALFDJ020000040.1 tpg gene 9079 9762 . + . ID=gene-O5D79_004848;Name=O5D79_004848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004848 DALFDJ020000040.1 Protein Homology CDS 9079 9762 . + 0 ID=cds-HJH9166212.1;Parent=gene-O5D79_004848;Dbxref=NCBI_GP:HJH9166212.1;Name=HJH9166212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227782.1;locus_tag=O5D79_004848;product=type IV secretion system protein;protein_id=HJH9166212.1;transl_table=11 DALFDJ020000040.1 tpg gene 9762 10100 . + . ID=gene-O5D79_004849;Name=O5D79_004849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004849 DALFDJ020000040.1 GeneMarkS-2+ CDS 9762 10100 . + 0 ID=cds-HJH9166213.1;Parent=gene-O5D79_004849;Dbxref=NCBI_GP:HJH9166213.1;Name=HJH9166213.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004849;product=hypothetical protein;protein_id=HJH9166213.1;transl_table=11 DALFDJ020000040.1 tpg gene 10093 10998 . + . ID=gene-O5D79_004850;Name=virB9;gbkey=Gene;gene=virB9;gene_biotype=protein_coding;locus_tag=O5D79_004850 DALFDJ020000040.1 Protein Homology CDS 10093 10998 . + 0 ID=cds-HJH9166214.1;Parent=gene-O5D79_004850;Dbxref=NCBI_GP:HJH9166214.1;Name=HJH9166214.1;gbkey=CDS;gene=virB9;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044151.1;locus_tag=O5D79_004850;product=P-type conjugative transfer protein VirB9;protein_id=HJH9166214.1;transl_table=11 DALFDJ020000040.1 tpg gene 11046 12314 . + . ID=gene-O5D79_004851;Name=virB10;gbkey=Gene;gene=virB10;gene_biotype=protein_coding;locus_tag=O5D79_004851 DALFDJ020000040.1 Protein Homology CDS 11046 12314 . + 0 ID=cds-HJH9166215.1;Parent=gene-O5D79_004851;Dbxref=NCBI_GP:HJH9166215.1;Name=HJH9166215.1;gbkey=CDS;gene=virB10;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227784.1;locus_tag=O5D79_004851;product=VirB10/TraB/TrbI family type IV secretion system protein;protein_id=HJH9166215.1;transl_table=11 DALFDJ020000040.1 tpg gene 12304 13329 . + . ID=gene-O5D79_004852;Name=virB11;gbkey=Gene;gene=virB11;gene_biotype=protein_coding;locus_tag=O5D79_004852 DALFDJ020000040.1 Protein Homology CDS 12304 13329 . + 0 ID=cds-HJH9166216.1;Parent=gene-O5D79_004852;Dbxref=NCBI_GP:HJH9166216.1;Name=HJH9166216.1;Ontology_term=GO:0044097,GO:0043684;gbkey=CDS;gene=virB11;go_component=type IV secretion system complex|0043684||IEA;go_process=secretion by the type IV secretion system|0044097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227785.1;locus_tag=O5D79_004852;product=P-type DNA transfer ATPase VirB11;protein_id=HJH9166216.1;transl_table=11 DALFDJ020000040.1 tpg gene 13326 13724 . + . ID=gene-O5D79_004853;Name=O5D79_004853;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004853 DALFDJ020000040.1 Protein Homology CDS 13326 13724 . + 0 ID=cds-HJH9166217.1;Parent=gene-O5D79_004853;Dbxref=NCBI_GP:HJH9166217.1;Name=HJH9166217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592251.1;locus_tag=O5D79_004853;product=cag pathogenicity island Cag12 family protein;protein_id=HJH9166217.1;transl_table=11 DALFDJ020000040.1 tpg gene 13760 14065 . + . ID=gene-O5D79_004854;Name=O5D79_004854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004854 DALFDJ020000040.1 Protein Homology CDS 13760 14065 . + 0 ID=cds-HJH9166218.1;Parent=gene-O5D79_004854;Dbxref=NCBI_GP:HJH9166218.1;Name=HJH9166218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754361.1;locus_tag=O5D79_004854;product=conjugal transfer protein;protein_id=HJH9166218.1;transl_table=11 DALFDJ020000040.1 tpg gene 14099 14404 . + . ID=gene-O5D79_004855;Name=O5D79_004855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004855 DALFDJ020000040.1 Protein Homology CDS 14099 14404 . + 0 ID=cds-HJH9166219.1;Parent=gene-O5D79_004855;Dbxref=NCBI_GP:HJH9166219.1;Name=HJH9166219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172016.1;locus_tag=O5D79_004855;product=dpoa decarboxylase;protein_id=HJH9166219.1;transl_table=11 DALFDJ020000040.1 tpg gene 15184 16920 . + . ID=gene-O5D79_004856;Name=O5D79_004856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004856 DALFDJ020000040.1 Protein Homology CDS 15184 16920 . + 0 ID=cds-HJH9166220.1;Parent=gene-O5D79_004856;Dbxref=NCBI_GP:HJH9166220.1;Name=HJH9166220.1;Ontology_term=GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017346477.1;locus_tag=O5D79_004856;product=type IV secretory system conjugative DNA transfer family protein;protein_id=HJH9166220.1;transl_table=11 DALFDJ020000040.1 tpg gene 16929 17681 . + . ID=gene-O5D79_004857;Name=mobC;gbkey=Gene;gene=mobC;gene_biotype=protein_coding;locus_tag=O5D79_004857 DALFDJ020000040.1 Protein Homology CDS 16929 17681 . + 0 ID=cds-HJH9166221.1;Parent=gene-O5D79_004857;Dbxref=NCBI_GP:HJH9166221.1;Name=HJH9166221.1;gbkey=CDS;gene=mobC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653126.1;locus_tag=O5D79_004857;product=MobC family replication-relaxation protein;protein_id=HJH9166221.1;transl_table=11 DALFDJ020000040.1 tpg gene 18625 19167 . - . ID=gene-O5D79_004858;Name=O5D79_004858;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004858 DALFDJ020000040.1 Protein Homology CDS 18625 19167 . - 0 ID=cds-HJH9166222.1;Parent=gene-O5D79_004858;Dbxref=NCBI_GP:HJH9166222.1;Name=HJH9166222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373448.1;locus_tag=O5D79_004858;product=inclusion body family protein;protein_id=HJH9166222.1;transl_table=11 DALFDJ020000040.1 tpg gene 19309 19584 . - . ID=gene-O5D79_004859;Name=O5D79_004859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004859 DALFDJ020000040.1 GeneMarkS-2+ CDS 19309 19584 . - 0 ID=cds-HJH9166223.1;Parent=gene-O5D79_004859;Dbxref=NCBI_GP:HJH9166223.1;Name=HJH9166223.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004859;product=hypothetical protein;protein_id=HJH9166223.1;transl_table=11 DALFDJ020000040.1 tpg gene 19652 20128 . - . ID=gene-O5D79_004860;Name=O5D79_004860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004860 DALFDJ020000040.1 GeneMarkS-2+ CDS 19652 20128 . - 0 ID=cds-HJH9166224.1;Parent=gene-O5D79_004860;Dbxref=NCBI_GP:HJH9166224.1;Name=HJH9166224.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004860;product=hypothetical protein;protein_id=HJH9166224.1;transl_table=11 DALFDJ020000040.1 tpg gene 20348 22849 . - . ID=gene-O5D79_004861;Name=O5D79_004861;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004861 DALFDJ020000040.1 Protein Homology CDS 20348 22849 . - 0 ID=cds-HJH9166225.1;Parent=gene-O5D79_004861;Dbxref=NCBI_GP:HJH9166225.1;Name=HJH9166225.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750512.1;locus_tag=O5D79_004861;product=fimbria/pilus outer membrane usher protein;protein_id=HJH9166225.1;transl_table=11 DALFDJ020000040.1 tpg gene 23004 23738 . - . ID=gene-O5D79_004862;Name=O5D79_004862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004862 DALFDJ020000040.1 Protein Homology CDS 23004 23738 . - 0 ID=cds-HJH9166226.1;Parent=gene-O5D79_004862;Dbxref=NCBI_GP:HJH9166226.1;Name=HJH9166226.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: protein motif:HMM:NF012565.6;locus_tag=O5D79_004862;product=fimbrial biogenesis chaperone;protein_id=HJH9166226.1;transl_table=11 DALFDJ020000040.1 tpg gene 24944 27049 . - . ID=gene-O5D79_004863;Name=O5D79_004863;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004863 DALFDJ020000040.1 Protein Homology CDS 24944 27049 . - 0 ID=cds-HJH9166227.1;Parent=gene-O5D79_004863;Dbxref=NCBI_GP:HJH9166227.1;Name=HJH9166227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012848104.1;locus_tag=O5D79_004863;product=exo-alpha-sialidase;protein_id=HJH9166227.1;transl_table=11 DALFDJ020000040.1 tpg gene 27149 28258 . - . ID=gene-O5D79_004864;Name=O5D79_004864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004864 DALFDJ020000040.1 Protein Homology CDS 27149 28258 . - 0 ID=cds-HJH9166228.1;Parent=gene-O5D79_004864;Dbxref=NCBI_GP:HJH9166228.1;Name=HJH9166228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001044132.1;locus_tag=O5D79_004864;product=N-acetylneuraminate epimerase;protein_id=HJH9166228.1;transl_table=11 DALFDJ020000040.1 tpg gene 28271 28990 . - . ID=gene-O5D79_004865;Name=O5D79_004865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004865 DALFDJ020000040.1 Protein Homology CDS 28271 28990 . - 0 ID=cds-HJH9166229.1;Parent=gene-O5D79_004865;Dbxref=NCBI_GP:HJH9166229.1;Name=HJH9166229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000748140.1;locus_tag=O5D79_004865;product=oligogalacturonate-specific porin KdgM family protein;protein_id=HJH9166229.1;transl_table=11 DALFDJ020000040.1 tpg gene 29115 30569 . - . ID=gene-O5D79_004866;Name=O5D79_004866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004866 DALFDJ020000040.1 Protein Homology CDS 29115 30569 . - 0 ID=cds-HJH9166230.1;Parent=gene-O5D79_004866;Dbxref=NCBI_GP:HJH9166230.1;Name=HJH9166230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002949407.1;locus_tag=O5D79_004866;product=MFS transporter;protein_id=HJH9166230.1;transl_table=11 DALFDJ020000040.1 tpg gene 30968 31579 . + . ID=gene-O5D79_004867;Name=O5D79_004867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004867 DALFDJ020000040.1 Protein Homology CDS 30968 31579 . + 0 ID=cds-HJH9166231.1;Parent=gene-O5D79_004867;Dbxref=NCBI_GP:HJH9166231.1;Name=HJH9166231.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF013756.6;locus_tag=O5D79_004867;product=flavin reductase family protein;protein_id=HJH9166231.1;transl_table=11 DALFDJ020000040.1 tpg gene 31721 32677 . - . ID=gene-O5D79_004868;Name=O5D79_004868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004868 DALFDJ020000040.1 Protein Homology CDS 31721 32677 . - 0 ID=cds-HJH9166232.1;Parent=gene-O5D79_004868;Dbxref=NCBI_GP:HJH9166232.1;Name=HJH9166232.1;Ontology_term=GO:0003697,GO:0008237,GO:0008270;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227789.1;locus_tag=O5D79_004868;product=ArdC family protein;protein_id=HJH9166232.1;transl_table=11 ##sequence-region DALFDJ020000041.1 1 31979 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000041.1 tpg region 1 31979 . + . ID=DALFDJ020000041.1:1..31979;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000041.1 tpg gene 57 1355 . - . ID=gene-O5D79_004869;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=O5D79_004869 DALFDJ020000041.1 Protein Homology CDS 57 1355 . - 0 ID=cds-HJH9166233.1;Parent=gene-O5D79_004869;Dbxref=NCBI_GP:HJH9166233.1;Name=HJH9166233.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=O5D79_004869;product=trigger factor;protein_id=HJH9166233.1;transl_table=11 DALFDJ020000041.1 tpg gene 1702 2019 . - . ID=gene-O5D79_004870;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=O5D79_004870 DALFDJ020000041.1 Protein Homology CDS 1702 2019 . - 0 ID=cds-HJH9166234.1;Parent=gene-O5D79_004870;Dbxref=NCBI_GP:HJH9166234.1;Name=HJH9166234.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459442.1;locus_tag=O5D79_004870;product=transcriptional regulator BolA;protein_id=HJH9166234.1;transl_table=11 DALFDJ020000041.1 tpg gene 2323 2901 . + . ID=gene-O5D79_004871;Name=O5D79_004871;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004871 DALFDJ020000041.1 Protein Homology CDS 2323 2901 . + 0 ID=cds-HJH9166235.1;Parent=gene-O5D79_004871;Dbxref=NCBI_GP:HJH9166235.1;Name=HJH9166235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=O5D79_004871;product=lipoprotein;protein_id=HJH9166235.1;transl_table=11 DALFDJ020000041.1 tpg gene 2945 4420 . + . ID=gene-O5D79_004872;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=O5D79_004872 DALFDJ020000041.1 Protein Homology CDS 2945 4420 . + 0 ID=cds-HJH9166236.1;Parent=gene-O5D79_004872;Dbxref=NCBI_GP:HJH9166236.1;Name=HJH9166236.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459440.1;locus_tag=O5D79_004872;product=muropeptide MFS transporter AmpG;protein_id=HJH9166236.1;transl_table=11 DALFDJ020000041.1 tpg gene 4873 5829 . + . ID=gene-O5D79_004873;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=O5D79_004873 DALFDJ020000041.1 Protein Homology CDS 4873 5829 . + 0 ID=cds-HJH9166237.1;Parent=gene-O5D79_004873;Dbxref=NCBI_GP:HJH9166237.1;Name=HJH9166237.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459439.1;locus_tag=O5D79_004873;product=cytochrome o ubiquinol oxidase subunit II;protein_id=HJH9166237.1;transl_table=11 DALFDJ020000041.1 tpg gene 5840 7831 . + . ID=gene-O5D79_004874;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=O5D79_004874 DALFDJ020000041.1 Protein Homology CDS 5840 7831 . + 0 ID=cds-HJH9166238.1;Parent=gene-O5D79_004874;Dbxref=NCBI_GP:HJH9166238.1;Name=HJH9166238.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=O5D79_004874;product=cytochrome o ubiquinol oxidase subunit I;protein_id=HJH9166238.1;transl_table=11 DALFDJ020000041.1 tpg gene 7821 8435 . + . ID=gene-O5D79_004875;Name=O5D79_004875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004875 DALFDJ020000041.1 Protein Homology CDS 7821 8435 . + 0 ID=cds-HJH9166239.1;Parent=gene-O5D79_004875;Dbxref=NCBI_GP:HJH9166239.1;Name=HJH9166239.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459437.1;locus_tag=O5D79_004875;product=cytochrome o ubiquinol oxidase subunit III;protein_id=HJH9166239.1;transl_table=11 DALFDJ020000041.1 tpg gene 8435 8764 . + . ID=gene-O5D79_004876;Name=O5D79_004876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004876 DALFDJ020000041.1 Protein Homology CDS 8435 8764 . + 0 ID=cds-HJH9166240.1;Parent=gene-O5D79_004876;Dbxref=NCBI_GP:HJH9166240.1;Name=HJH9166240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459436.1;locus_tag=O5D79_004876;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=HJH9166240.1;transl_table=11 DALFDJ020000041.1 tpg gene 8776 9666 . + . ID=gene-O5D79_004877;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=O5D79_004877 DALFDJ020000041.1 Protein Homology CDS 8776 9666 . + 0 ID=cds-HJH9166241.1;Parent=gene-O5D79_004877;Dbxref=NCBI_GP:HJH9166241.1;Name=HJH9166241.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459435.1;locus_tag=O5D79_004877;product=heme o synthase;protein_id=HJH9166241.1;transl_table=11 DALFDJ020000041.1 tpg gene 10000 11058 . + . ID=gene-O5D79_004878;Name=O5D79_004878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004878 DALFDJ020000041.1 Protein Homology CDS 10000 11058 . + 0 ID=cds-HJH9166242.1;Parent=gene-O5D79_004878;Dbxref=NCBI_GP:HJH9166242.1;Name=HJH9166242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283391.1;locus_tag=O5D79_004878;product=hypothetical protein;protein_id=HJH9166242.1;transl_table=11 DALFDJ020000041.1 tpg gene 11506 12870 . + . ID=gene-O5D79_004879;Name=O5D79_004879;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004879 DALFDJ020000041.1 Protein Homology CDS 11506 12870 . + 0 ID=cds-HJH9166243.1;Parent=gene-O5D79_004879;Dbxref=NCBI_GP:HJH9166243.1;Name=HJH9166243.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507029.1;locus_tag=O5D79_004879;product=MFS transporter;protein_id=HJH9166243.1;transl_table=11 DALFDJ020000041.1 tpg gene 12917 13408 . - . ID=gene-O5D79_004880;Name=O5D79_004880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004880 DALFDJ020000041.1 Protein Homology CDS 12917 13408 . - 0 ID=cds-HJH9166244.1;Parent=gene-O5D79_004880;Dbxref=NCBI_GP:HJH9166244.1;Name=HJH9166244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=O5D79_004880;product=YajQ family cyclic di-GMP-binding protein;protein_id=HJH9166244.1;transl_table=11 DALFDJ020000041.1 tpg gene 13534 14445 . + . ID=gene-O5D79_004881;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=O5D79_004881 DALFDJ020000041.1 Protein Homology CDS 13534 14445 . + 0 ID=cds-HJH9166245.1;Parent=gene-O5D79_004881;Dbxref=NCBI_GP:HJH9166245.1;Name=HJH9166245.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459429.1;locus_tag=O5D79_004881;product=2-dehydropantoate 2-reductase;protein_id=HJH9166245.1;transl_table=11 DALFDJ020000041.1 tpg gene 14408 14998 . + . ID=gene-O5D79_004882;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=O5D79_004882 DALFDJ020000041.1 Protein Homology CDS 14408 14998 . + 0 ID=cds-HJH9166246.1;Parent=gene-O5D79_004882;Dbxref=NCBI_GP:HJH9166246.1;Name=HJH9166246.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459428.1;locus_tag=O5D79_004882;product=protein deglycase YajL;protein_id=HJH9166246.1;transl_table=11 DALFDJ020000041.1 tpg gene 15108 15896 . - . ID=gene-O5D79_004883;Name=O5D79_004883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004883 DALFDJ020000041.1 Protein Homology CDS 15108 15896 . - 0 ID=cds-HJH9166247.1;Parent=gene-O5D79_004883;Dbxref=NCBI_GP:HJH9166247.1;Name=HJH9166247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000401424.1;locus_tag=O5D79_004883;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=HJH9166247.1;transl_table=11 DALFDJ020000041.1 tpg gene 15907 16455 . - . ID=gene-O5D79_004884;Name=O5D79_004884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004884 DALFDJ020000041.1 Protein Homology CDS 15907 16455 . - 0 ID=cds-HJH9166248.1;Parent=gene-O5D79_004884;Dbxref=NCBI_GP:HJH9166248.1;Name=HJH9166248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001533962.1;locus_tag=O5D79_004884;product=4Fe-4S dicluster domain-containing protein;protein_id=HJH9166248.1;transl_table=11 DALFDJ020000041.1 tpg gene 16458 18791 . - . ID=gene-O5D79_004885;Name=O5D79_004885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004885 DALFDJ020000041.1 Protein Homology CDS 16458 18791 . - 0 ID=cds-HJH9166249.1;Parent=gene-O5D79_004885;Dbxref=NCBI_GP:HJH9166249.1;Name=HJH9166249.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000387839.1;locus_tag=O5D79_004885;product=molybdopterin-containing oxidoreductase family protein;protein_id=HJH9166249.1;transl_table=11 DALFDJ020000041.1 tpg gene 18959 19645 . + . ID=gene-O5D79_004886;Name=O5D79_004886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004886 DALFDJ020000041.1 Protein Homology CDS 18959 19645 . + 0 ID=cds-HJH9166250.1;Parent=gene-O5D79_004886;Dbxref=NCBI_GP:HJH9166250.1;Name=HJH9166250.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000808044.1;locus_tag=O5D79_004886;product=helix-turn-helix domain-containing protein;protein_id=HJH9166250.1;transl_table=11 DALFDJ020000041.1 tpg gene 19693 21141 . - . ID=gene-O5D79_004887;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=O5D79_004887 DALFDJ020000041.1 Protein Homology CDS 19693 21141 . - 0 ID=cds-HJH9166251.1;Parent=gene-O5D79_004887;Dbxref=NCBI_GP:HJH9166251.1;Name=HJH9166251.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=O5D79_004887;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=HJH9166251.1;transl_table=11 DALFDJ020000041.1 tpg gene 21351 21593 . + . ID=gene-O5D79_004888;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=O5D79_004888 DALFDJ020000041.1 Protein Homology CDS 21351 21593 . + 0 ID=cds-HJH9166252.1;Parent=gene-O5D79_004888;Dbxref=NCBI_GP:HJH9166252.1;Name=HJH9166252.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459419.1;locus_tag=O5D79_004888;product=exodeoxyribonuclease VII small subunit;protein_id=HJH9166252.1;transl_table=11 DALFDJ020000041.1 tpg gene 21594 22493 . + . ID=gene-O5D79_004889;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=O5D79_004889 DALFDJ020000041.1 Protein Homology CDS 21594 22493 . + 0 ID=cds-HJH9166253.1;Parent=gene-O5D79_004889;Dbxref=NCBI_GP:HJH9166253.1;Name=HJH9166253.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459418.1;locus_tag=O5D79_004889;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=HJH9166253.1;transl_table=11 DALFDJ020000041.1 tpg gene 22517 24379 . + . ID=gene-O5D79_004890;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=O5D79_004890 DALFDJ020000041.1 Protein Homology CDS 22517 24379 . + 0 ID=cds-HJH9166254.1;Parent=gene-O5D79_004890;Dbxref=NCBI_GP:HJH9166254.1;Name=HJH9166254.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459417.1;locus_tag=O5D79_004890;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=HJH9166254.1;transl_table=11 DALFDJ020000041.1 tpg gene 24436 25410 . + . ID=gene-O5D79_004891;Name=O5D79_004891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004891 DALFDJ020000041.1 Protein Homology CDS 24436 25410 . + 0 ID=cds-HJH9166255.1;Parent=gene-O5D79_004891;Dbxref=NCBI_GP:HJH9166255.1;Name=HJH9166255.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459416.1;locus_tag=O5D79_004891;product=aldo/keto reductase;protein_id=HJH9166255.1;transl_table=11 DALFDJ020000041.1 tpg pseudogene 25418 25509 . + . ID=gene-O5D79_004892;Name=O5D79_004892;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004892;pseudo=true DALFDJ020000041.1 Protein Homology CDS 25418 25509 . + 0 ID=cds-O5D79_004892;Parent=gene-O5D79_004892;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=O5D79_004892;product=hypothetical protein;pseudo=true;transl_table=11 DALFDJ020000041.1 tpg gene 25514 26029 . - . ID=gene-O5D79_004893;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=O5D79_004893 DALFDJ020000041.1 Protein Homology CDS 25514 26029 . - 0 ID=cds-HJH9166256.1;Parent=gene-O5D79_004893;Dbxref=NCBI_GP:HJH9166256.1;Name=HJH9166256.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459415.1;locus_tag=O5D79_004893;product=phosphatidylglycerophosphatase A;protein_id=HJH9166256.1;transl_table=11 DALFDJ020000041.1 tpg gene 26007 26987 . - . ID=gene-O5D79_004894;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=O5D79_004894 DALFDJ020000041.1 Protein Homology CDS 26007 26987 . - 0 ID=cds-HJH9166257.1;Parent=gene-O5D79_004894;Dbxref=NCBI_GP:HJH9166257.1;Name=HJH9166257.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308497.1;locus_tag=O5D79_004894;product=thiamine-phosphate kinase;protein_id=HJH9166257.1;transl_table=11 DALFDJ020000041.1 tpg gene 27066 27485 . - . ID=gene-O5D79_004895;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=O5D79_004895 DALFDJ020000041.1 Protein Homology CDS 27066 27485 . - 0 ID=cds-HJH9166258.1;Parent=gene-O5D79_004895;Dbxref=NCBI_GP:HJH9166258.1;Name=HJH9166258.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=O5D79_004895;product=transcription antitermination factor NusB;protein_id=HJH9166258.1;transl_table=11 DALFDJ020000041.1 tpg gene 27506 27976 . - . ID=gene-O5D79_004896;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=O5D79_004896 DALFDJ020000041.1 Protein Homology CDS 27506 27976 . - 0 ID=cds-HJH9166259.1;Parent=gene-O5D79_004896;Dbxref=NCBI_GP:HJH9166259.1;Name=HJH9166259.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=O5D79_004896;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=HJH9166259.1;transl_table=11 DALFDJ020000041.1 tpg gene 28065 29168 . - . ID=gene-O5D79_004897;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=O5D79_004897 DALFDJ020000041.1 Protein Homology CDS 28065 29168 . - 0 ID=cds-HJH9166260.1;Parent=gene-O5D79_004897;Dbxref=NCBI_GP:HJH9166260.1;Name=HJH9166260.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459411.1;locus_tag=O5D79_004897;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=HJH9166260.1;transl_table=11 DALFDJ020000041.1 tpg gene 29172 29621 . - . ID=gene-O5D79_004898;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=O5D79_004898 DALFDJ020000041.1 Protein Homology CDS 29172 29621 . - 0 ID=cds-HJH9166261.1;Parent=gene-O5D79_004898;Dbxref=NCBI_GP:HJH9166261.1;Name=HJH9166261.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=O5D79_004898;product=transcriptional regulator NrdR;protein_id=HJH9166261.1;transl_table=11 DALFDJ020000041.1 tpg gene 29773 30312 . + . ID=gene-O5D79_004899;Name=O5D79_004899;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004899 DALFDJ020000041.1 Protein Homology CDS 29773 30312 . + 0 ID=cds-HJH9166262.1;Parent=gene-O5D79_004899;Dbxref=NCBI_GP:HJH9166262.1;Name=HJH9166262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459409.1;locus_tag=O5D79_004899;product=DUF3251 domain-containing protein;protein_id=HJH9166262.1;transl_table=11 DALFDJ020000041.1 tpg gene 30612 31475 . + . ID=gene-O5D79_004900;Name=O5D79_004900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004900 DALFDJ020000041.1 Protein Homology CDS 30612 31475 . + 0 ID=cds-HJH9166263.1;Parent=gene-O5D79_004900;Dbxref=NCBI_GP:HJH9166263.1;Name=HJH9166263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459408.1;locus_tag=O5D79_004900;product=nucleoside-specific channel-forming protein Tsx;protein_id=HJH9166263.1;transl_table=11 DALFDJ020000041.1 tpg gene 31559 31666 . - . ID=gene-O5D79_004901;Name=O5D79_004901;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004901 DALFDJ020000041.1 Protein Homology CDS 31559 31666 . - 0 ID=cds-HJH9166264.1;Parent=gene-O5D79_004901;Dbxref=NCBI_GP:HJH9166264.1;Name=HJH9166264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000176312.1;locus_tag=O5D79_004901;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=HJH9166264.1;transl_table=11 ##sequence-region DALFDJ020000042.1 1 29544 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000042.1 tpg region 1 29544 . + . ID=DALFDJ020000042.1:1..29544;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000042.1 tpg gene 39 154 . + . ID=gene-O5D79_004902;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=O5D79_004902 DALFDJ020000042.1 cmsearch rRNA 39 154 . + . ID=rna-O5D79_004902;Parent=gene-O5D79_004902;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_004902;product=5S ribosomal RNA DALFDJ020000042.1 cmsearch exon 39 154 . + . ID=exon-O5D79_004902-1;Parent=rna-O5D79_004902;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_004902;product=5S ribosomal RNA DALFDJ020000042.1 tpg gene 319 756 . - . ID=gene-O5D79_004903;Name=O5D79_004903;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004903 DALFDJ020000042.1 Protein Homology CDS 319 756 . - 0 ID=cds-HJH9166265.1;Parent=gene-O5D79_004903;Dbxref=NCBI_GP:HJH9166265.1;Name=HJH9166265.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463046.1;locus_tag=O5D79_004903;product=acetyltransferase;protein_id=HJH9166265.1;transl_table=11 DALFDJ020000042.1 tpg gene 913 1842 . + . ID=gene-O5D79_004904;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=O5D79_004904 DALFDJ020000042.1 Protein Homology CDS 913 1842 . + 0 ID=cds-HJH9166266.1;Parent=gene-O5D79_004904;Dbxref=NCBI_GP:HJH9166266.1;Name=HJH9166266.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=O5D79_004904;product=homoserine O-succinyltransferase MetA;protein_id=HJH9166266.1;transl_table=11 DALFDJ020000042.1 tpg gene 2111 3712 . + . ID=gene-O5D79_004905;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=O5D79_004905 DALFDJ020000042.1 Protein Homology CDS 2111 3712 . + 0 ID=cds-HJH9166267.1;Parent=gene-O5D79_004905;Dbxref=NCBI_GP:HJH9166267.1;Name=HJH9166267.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463048.1;locus_tag=O5D79_004905;product=malate synthase A;protein_id=HJH9166267.1;transl_table=11 DALFDJ020000042.1 tpg gene 3744 5048 . + . ID=gene-O5D79_004906;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=O5D79_004906 DALFDJ020000042.1 Protein Homology CDS 3744 5048 . + 0 ID=cds-HJH9166268.1;Parent=gene-O5D79_004906;Dbxref=NCBI_GP:HJH9166268.1;Name=HJH9166268.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=O5D79_004906;product=isocitrate lyase;protein_id=HJH9166268.1;transl_table=11 DALFDJ020000042.1 tpg gene 5150 6901 . + . ID=gene-O5D79_004907;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=O5D79_004907 DALFDJ020000042.1 Protein Homology CDS 5150 6901 . + 0 ID=cds-HJH9166269.1;Parent=gene-O5D79_004907;Dbxref=NCBI_GP:HJH9166269.1;Name=HJH9166269.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463050.1;locus_tag=O5D79_004907;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=HJH9166269.1;transl_table=11 DALFDJ020000042.1 tpg gene 6865 7272 . - . ID=gene-O5D79_004908;Name=O5D79_004908;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004908 DALFDJ020000042.1 Protein Homology CDS 6865 7272 . - 0 ID=cds-HJH9166270.1;Parent=gene-O5D79_004908;Dbxref=NCBI_GP:HJH9166270.1;Name=HJH9166270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463051.1;locus_tag=O5D79_004908;product=ASCH domain-containing protein;protein_id=HJH9166270.1;transl_table=11 DALFDJ020000042.1 tpg gene 7283 8107 . - . ID=gene-O5D79_004909;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=O5D79_004909 DALFDJ020000042.1 Protein Homology CDS 7283 8107 . - 0 ID=cds-HJH9166271.1;Parent=gene-O5D79_004909;Dbxref=NCBI_GP:HJH9166271.1;Name=HJH9166271.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463052.1;locus_tag=O5D79_004909;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=HJH9166271.1;transl_table=11 DALFDJ020000042.1 tpg gene 8412 12095 . + . ID=gene-O5D79_004910;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=O5D79_004910 DALFDJ020000042.1 Protein Homology CDS 8412 12095 . + 0 ID=cds-HJH9166272.1;Parent=gene-O5D79_004910;Dbxref=NCBI_GP:HJH9166272.1;Name=HJH9166272.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312964.1;locus_tag=O5D79_004910;product=methionine synthase;protein_id=HJH9166272.1;transl_table=11 DALFDJ020000042.1 tpg gene 12362 13993 . + . ID=gene-O5D79_004911;Name=O5D79_004911;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004911 DALFDJ020000042.1 Protein Homology CDS 12362 13993 . + 0 ID=cds-HJH9166273.1;Parent=gene-O5D79_004911;Dbxref=NCBI_GP:HJH9166273.1;Name=HJH9166273.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463054.1;locus_tag=O5D79_004911;product=Na/Pi cotransporter family protein;protein_id=HJH9166273.1;transl_table=11 DALFDJ020000042.1 tpg gene 14069 14758 . - . ID=gene-O5D79_004912;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=O5D79_004912 DALFDJ020000042.1 Protein Homology CDS 14069 14758 . - 0 ID=cds-HJH9166274.1;Parent=gene-O5D79_004912;Dbxref=NCBI_GP:HJH9166274.1;Name=HJH9166274.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463055.1;locus_tag=O5D79_004912;product=dipeptidase PepE;protein_id=HJH9166274.1;transl_table=11 DALFDJ020000042.1 tpg gene 14830 14931 . + . ID=gene-O5D79_004913;Name=O5D79_004913;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004913 DALFDJ020000042.1 Protein Homology CDS 14830 14931 . + 0 ID=cds-HJH9166275.1;Parent=gene-O5D79_004913;Dbxref=NCBI_GP:HJH9166275.1;Name=HJH9166275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463056.1;locus_tag=O5D79_004913;product=hypothetical protein;protein_id=HJH9166275.1;transl_table=11 DALFDJ020000042.1 tpg gene 14966 15505 . + . ID=gene-O5D79_004914;Name=O5D79_004914;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004914 DALFDJ020000042.1 Protein Homology CDS 14966 15505 . + 0 ID=cds-HJH9166276.1;Parent=gene-O5D79_004914;Dbxref=NCBI_GP:HJH9166276.1;Name=HJH9166276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=O5D79_004914;product=DUF2058 domain-containing protein;protein_id=HJH9166276.1;transl_table=11 DALFDJ020000042.1 tpg gene 15552 16421 . + . ID=gene-O5D79_004915;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=O5D79_004915 DALFDJ020000042.1 Protein Homology CDS 15552 16421 . + 0 ID=cds-HJH9166277.1;Parent=gene-O5D79_004915;Dbxref=NCBI_GP:HJH9166277.1;Name=HJH9166277.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463058.1;locus_tag=O5D79_004915;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=HJH9166277.1;transl_table=11 DALFDJ020000042.1 tpg gene 16418 16690 . - . ID=gene-O5D79_004916;Name=O5D79_004916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004916 DALFDJ020000042.1 Protein Homology CDS 16418 16690 . - 0 ID=cds-HJH9166278.1;Parent=gene-O5D79_004916;Dbxref=NCBI_GP:HJH9166278.1;Name=HJH9166278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463059.1;locus_tag=O5D79_004916;product=DUF3811 domain-containing protein;protein_id=HJH9166278.1;transl_table=11 DALFDJ020000042.1 tpg gene 16901 17659 . - . ID=gene-O5D79_004917;Name=O5D79_004917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004917 DALFDJ020000042.1 Protein Homology CDS 16901 17659 . - 0 ID=cds-HJH9166279.1;Parent=gene-O5D79_004917;Dbxref=NCBI_GP:HJH9166279.1;Name=HJH9166279.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001068167.1;locus_tag=O5D79_004917;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=HJH9166279.1;transl_table=11 DALFDJ020000042.1 tpg gene 17646 18509 . - . ID=gene-O5D79_004918;Name=O5D79_004918;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004918 DALFDJ020000042.1 Protein Homology CDS 17646 18509 . - 0 ID=cds-HJH9166280.1;Parent=gene-O5D79_004918;Dbxref=NCBI_GP:HJH9166280.1;Name=HJH9166280.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000924639.1;locus_tag=O5D79_004918;product=Cof-type HAD-IIB family hydrolase;protein_id=HJH9166280.1;transl_table=11 DALFDJ020000042.1 tpg gene 18526 19365 . - . ID=gene-O5D79_004919;Name=O5D79_004919;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004919 DALFDJ020000042.1 Protein Homology CDS 18526 19365 . - 0 ID=cds-HJH9166281.1;Parent=gene-O5D79_004919;Dbxref=NCBI_GP:HJH9166281.1;Name=HJH9166281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000472335.1;locus_tag=O5D79_004919;product=histidine biosynthesis protein;protein_id=HJH9166281.1;transl_table=11 DALFDJ020000042.1 tpg gene 19389 20978 . - . ID=gene-O5D79_004920;Name=O5D79_004920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004920 DALFDJ020000042.1 Protein Homology CDS 19389 20978 . - 0 ID=cds-HJH9166282.1;Parent=gene-O5D79_004920;Dbxref=NCBI_GP:HJH9166282.1;Name=HJH9166282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716843.1;locus_tag=O5D79_004920;product=PTS sugar transporter;protein_id=HJH9166282.1;transl_table=11 DALFDJ020000042.1 tpg gene 21356 22705 . - . ID=gene-O5D79_004921;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=O5D79_004921 DALFDJ020000042.1 Protein Homology CDS 21356 22705 . - 0 ID=cds-HJH9166283.1;Parent=gene-O5D79_004921;Dbxref=NCBI_GP:HJH9166283.1;Name=HJH9166283.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463085.1;locus_tag=O5D79_004921;product=lysine-sensitive aspartokinase 3;protein_id=HJH9166283.1;transl_table=11 DALFDJ020000042.1 tpg gene 23093 24742 . + . ID=gene-O5D79_004922;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=O5D79_004922 DALFDJ020000042.1 Protein Homology CDS 23093 24742 . + 0 ID=cds-HJH9166284.1;Parent=gene-O5D79_004922;Dbxref=NCBI_GP:HJH9166284.1;Name=HJH9166284.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=O5D79_004922;product=glucose-6-phosphate isomerase;protein_id=HJH9166284.1;transl_table=11 DALFDJ020000042.1 tpg gene 25186 25428 . + . ID=gene-O5D79_004923;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=O5D79_004923 DALFDJ020000042.1 Protein Homology CDS 25186 25428 . + 0 ID=cds-HJH9166285.1;Parent=gene-O5D79_004923;Dbxref=NCBI_GP:HJH9166285.1;Name=HJH9166285.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=O5D79_004923;product=exopolysaccharide production protein YjbE;protein_id=HJH9166285.1;transl_table=11 DALFDJ020000042.1 tpg gene 25492 26130 . + . ID=gene-O5D79_004924;Name=O5D79_004924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004924 DALFDJ020000042.1 Protein Homology CDS 25492 26130 . + 0 ID=cds-HJH9166286.1;Parent=gene-O5D79_004924;Dbxref=NCBI_GP:HJH9166286.1;Name=HJH9166286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824802.1;locus_tag=O5D79_004924;product=YjbF family lipoprotein;protein_id=HJH9166286.1;transl_table=11 DALFDJ020000042.1 tpg gene 26127 26864 . + . ID=gene-O5D79_004925;Name=O5D79_004925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004925 DALFDJ020000042.1 Protein Homology CDS 26127 26864 . + 0 ID=cds-HJH9166287.1;Parent=gene-O5D79_004925;Dbxref=NCBI_GP:HJH9166287.1;Name=HJH9166287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463089.1;locus_tag=O5D79_004925;product=capsule biosynthesis GfcC D2 domain-containing protein;protein_id=HJH9166287.1;transl_table=11 DALFDJ020000042.1 tpg gene 26864 28960 . + . ID=gene-O5D79_004926;Name=O5D79_004926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004926 DALFDJ020000042.1 Protein Homology CDS 26864 28960 . + 0 ID=cds-HJH9166288.1;Parent=gene-O5D79_004926;Dbxref=NCBI_GP:HJH9166288.1;Name=HJH9166288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=O5D79_004926;product=YjbH domain-containing protein;protein_id=HJH9166288.1;transl_table=11 DALFDJ020000042.1 tpg gene 29103 29513 . + . ID=gene-O5D79_004927;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=O5D79_004927 DALFDJ020000042.1 Protein Homology CDS 29103 29513 . + 0 ID=cds-HJH9166289.1;Parent=gene-O5D79_004927;Dbxref=NCBI_GP:HJH9166289.1;Name=HJH9166289.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463091.1;locus_tag=O5D79_004927;product=phosphate-starvation-inducible protein PsiE;protein_id=HJH9166289.1;transl_table=11 ##sequence-region DALFDJ020000043.1 1 23931 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000043.1 tpg region 1 23931 . + . ID=DALFDJ020000043.1:1..23931;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000043.1 tpg gene 143 772 . + . ID=gene-O5D79_004928;Name=O5D79_004928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004928 DALFDJ020000043.1 GeneMarkS-2+ CDS 143 772 . + 0 ID=cds-HJH9166290.1;Parent=gene-O5D79_004928;Dbxref=NCBI_GP:HJH9166290.1;Name=HJH9166290.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004928;product=hypothetical protein;protein_id=HJH9166290.1;transl_table=11 DALFDJ020000043.1 tpg gene 938 1138 . + . ID=gene-O5D79_004929;Name=O5D79_004929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004929 DALFDJ020000043.1 Protein Homology CDS 938 1138 . + 0 ID=cds-HJH9166291.1;Parent=gene-O5D79_004929;Dbxref=NCBI_GP:HJH9166291.1;Name=HJH9166291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727203.1;locus_tag=O5D79_004929;product=hypothetical protein;protein_id=HJH9166291.1;transl_table=11 DALFDJ020000043.1 tpg gene 1202 1663 . + . ID=gene-O5D79_004930;Name=O5D79_004930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004930 DALFDJ020000043.1 Protein Homology CDS 1202 1663 . + 0 ID=cds-HJH9166292.1;Parent=gene-O5D79_004930;Dbxref=NCBI_GP:HJH9166292.1;Name=HJH9166292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014728212.1;locus_tag=O5D79_004930;product=YbcN family protein;protein_id=HJH9166292.1;transl_table=11 DALFDJ020000043.1 tpg gene 1663 2268 . + . ID=gene-O5D79_004931;Name=O5D79_004931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004931 DALFDJ020000043.1 Protein Homology CDS 1663 2268 . + 0 ID=cds-HJH9166293.1;Parent=gene-O5D79_004931;Dbxref=NCBI_GP:HJH9166293.1;Name=HJH9166293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001568780.1;locus_tag=O5D79_004931;product=recombination protein NinG;protein_id=HJH9166293.1;transl_table=11 DALFDJ020000043.1 tpg gene 2265 2855 . + . ID=gene-O5D79_004932;Name=O5D79_004932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004932 DALFDJ020000043.1 Protein Homology CDS 2265 2855 . + 0 ID=cds-HJH9166294.1;Parent=gene-O5D79_004932;Dbxref=NCBI_GP:HJH9166294.1;Name=HJH9166294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727199.1;locus_tag=O5D79_004932;product=hypothetical protein;protein_id=HJH9166294.1;transl_table=11 DALFDJ020000043.1 tpg gene 2970 3428 . + . ID=gene-O5D79_004933;Name=O5D79_004933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004933 DALFDJ020000043.1 Protein Homology CDS 2970 3428 . + 0 ID=cds-HJH9166295.1;Parent=gene-O5D79_004933;Dbxref=NCBI_GP:HJH9166295.1;Name=HJH9166295.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019056.6;locus_tag=O5D79_004933;product=hypothetical protein;protein_id=HJH9166295.1;transl_table=11 DALFDJ020000043.1 tpg gene 3499 3837 . + . ID=gene-O5D79_004934;Name=O5D79_004934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004934 DALFDJ020000043.1 GeneMarkS-2+ CDS 3499 3837 . + 0 ID=cds-HJH9166296.1;Parent=gene-O5D79_004934;Dbxref=NCBI_GP:HJH9166296.1;Name=HJH9166296.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004934;product=hypothetical protein;protein_id=HJH9166296.1;transl_table=11 DALFDJ020000043.1 tpg gene 3830 4573 . + . ID=gene-O5D79_004935;Name=O5D79_004935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004935 DALFDJ020000043.1 GeneMarkS-2+ CDS 3830 4573 . + 0 ID=cds-HJH9166297.1;Parent=gene-O5D79_004935;Dbxref=NCBI_GP:HJH9166297.1;Name=HJH9166297.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004935;product=hypothetical protein;protein_id=HJH9166297.1;transl_table=11 DALFDJ020000043.1 tpg gene 4573 5223 . + . ID=gene-O5D79_004936;Name=O5D79_004936;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004936 DALFDJ020000043.1 GeneMarkS-2+ CDS 4573 5223 . + 0 ID=cds-HJH9166298.1;Parent=gene-O5D79_004936;Dbxref=NCBI_GP:HJH9166298.1;Name=HJH9166298.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004936;product=hypothetical protein;protein_id=HJH9166298.1;transl_table=11 DALFDJ020000043.1 tpg gene 5336 5545 . + . ID=gene-O5D79_004937;Name=O5D79_004937;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004937 DALFDJ020000043.1 Protein Homology CDS 5336 5545 . + 0 ID=cds-HJH9166299.1;Parent=gene-O5D79_004937;Dbxref=NCBI_GP:HJH9166299.1;Name=HJH9166299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000561970.1;locus_tag=O5D79_004937;product=hypothetical protein;protein_id=HJH9166299.1;transl_table=11 DALFDJ020000043.1 tpg gene 6039 6347 . + . ID=gene-O5D79_004938;Name=O5D79_004938;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004938 DALFDJ020000043.1 GeneMarkS-2+ CDS 6039 6347 . + 0 ID=cds-HJH9166300.1;Parent=gene-O5D79_004938;Dbxref=NCBI_GP:HJH9166300.1;Name=HJH9166300.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004938;product=phage holin family protein;protein_id=HJH9166300.1;transl_table=11 DALFDJ020000043.1 tpg gene 6356 6505 . + . ID=gene-O5D79_004939;Name=O5D79_004939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004939 DALFDJ020000043.1 GeneMarkS-2+ CDS 6356 6505 . + 0 ID=cds-HJH9166301.1;Parent=gene-O5D79_004939;Dbxref=NCBI_GP:HJH9166301.1;Name=HJH9166301.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004939;product=hypothetical protein;protein_id=HJH9166301.1;transl_table=11 DALFDJ020000043.1 tpg gene 6566 6991 . + . ID=gene-O5D79_004940;Name=O5D79_004940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004940 DALFDJ020000043.1 Protein Homology CDS 6566 6991 . + 0 ID=cds-HJH9166302.1;Parent=gene-O5D79_004940;Dbxref=NCBI_GP:HJH9166302.1;Name=HJH9166302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727236.1;locus_tag=O5D79_004940;product=lysozyme;protein_id=HJH9166302.1;transl_table=11 DALFDJ020000043.1 tpg gene 7323 7823 . + . ID=gene-O5D79_004941;Name=O5D79_004941;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004941 DALFDJ020000043.1 Protein Homology CDS 7323 7823 . + 0 ID=cds-HJH9166303.1;Parent=gene-O5D79_004941;Dbxref=NCBI_GP:HJH9166303.1;Name=HJH9166303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001472853.1;locus_tag=O5D79_004941;product=KilA-N domain-containing protein;protein_id=HJH9166303.1;transl_table=11 DALFDJ020000043.1 tpg gene 7853 8044 . + . ID=gene-O5D79_004942;Name=O5D79_004942;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004942 DALFDJ020000043.1 Protein Homology CDS 7853 8044 . + 0 ID=cds-HJH9166304.1;Parent=gene-O5D79_004942;Dbxref=NCBI_GP:HJH9166304.1;Name=HJH9166304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727234.1;locus_tag=O5D79_004942;product=hypothetical protein;protein_id=HJH9166304.1;transl_table=11 DALFDJ020000043.1 tpg gene 8165 8362 . + . ID=gene-O5D79_004943;Name=O5D79_004943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004943 DALFDJ020000043.1 Protein Homology CDS 8165 8362 . + 0 ID=cds-HJH9166305.1;Parent=gene-O5D79_004943;Dbxref=NCBI_GP:HJH9166305.1;Name=HJH9166305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014526537.1;locus_tag=O5D79_004943;product=hypothetical protein;protein_id=HJH9166305.1;transl_table=11 DALFDJ020000043.1 tpg gene 8640 9146 . + . ID=gene-O5D79_004944;Name=O5D79_004944;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004944 DALFDJ020000043.1 Protein Homology CDS 8640 9146 . + 0 ID=cds-HJH9166306.1;Parent=gene-O5D79_004944;Dbxref=NCBI_GP:HJH9166306.1;Name=HJH9166306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727233.1;locus_tag=O5D79_004944;product=DUF1441 family protein;protein_id=HJH9166306.1;transl_table=11 DALFDJ020000043.1 tpg gene 9146 11224 . + . ID=gene-O5D79_004945;Name=O5D79_004945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004945 DALFDJ020000043.1 Protein Homology CDS 9146 11224 . + 0 ID=cds-HJH9166307.1;Parent=gene-O5D79_004945;Dbxref=NCBI_GP:HJH9166307.1;Name=HJH9166307.1;Ontology_term=GO:0004519,GO:0005524,GO:0016887;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459887.1;locus_tag=O5D79_004945;product=phage terminase large subunit family protein;protein_id=HJH9166307.1;transl_table=11 DALFDJ020000043.1 tpg gene 11234 11446 . + . ID=gene-O5D79_004946;Name=O5D79_004946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004946 DALFDJ020000043.1 Protein Homology CDS 11234 11446 . + 0 ID=cds-HJH9166308.1;Parent=gene-O5D79_004946;Dbxref=NCBI_GP:HJH9166308.1;Name=HJH9166308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727230.1;locus_tag=O5D79_004946;product=hypothetical protein;protein_id=HJH9166308.1;transl_table=11 DALFDJ020000043.1 tpg gene 11449 12987 . + . ID=gene-O5D79_004947;Name=O5D79_004947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004947 DALFDJ020000043.1 Protein Homology CDS 11449 12987 . + 0 ID=cds-HJH9166309.1;Parent=gene-O5D79_004947;Dbxref=NCBI_GP:HJH9166309.1;Name=HJH9166309.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000511055.1;locus_tag=O5D79_004947;product=phage portal protein;protein_id=HJH9166309.1;transl_table=11 DALFDJ020000043.1 tpg gene 12938 14971 . + . ID=gene-O5D79_004948;Name=O5D79_004948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004948 DALFDJ020000043.1 Protein Homology CDS 12938 14971 . + 0 ID=cds-HJH9166310.1;Parent=gene-O5D79_004948;Dbxref=NCBI_GP:HJH9166310.1;Name=HJH9166310.1;Ontology_term=GO:0019082,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001727228.1;locus_tag=O5D79_004948;product=ClpP-like prohead protease/major capsid protein fusion protein;protein_id=HJH9166310.1;transl_table=11 DALFDJ020000043.1 tpg gene 14985 15311 . + . ID=gene-O5D79_004949;Name=O5D79_004949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004949 DALFDJ020000043.1 Protein Homology CDS 14985 15311 . + 0 ID=cds-HJH9166311.1;Parent=gene-O5D79_004949;Dbxref=NCBI_GP:HJH9166311.1;Name=HJH9166311.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021473.6;locus_tag=O5D79_004949;product=capsid cement protein;protein_id=HJH9166311.1;transl_table=11 DALFDJ020000043.1 tpg gene 15311 15661 . + . ID=gene-O5D79_004950;Name=O5D79_004950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004950 DALFDJ020000043.1 Protein Homology CDS 15311 15661 . + 0 ID=cds-HJH9166312.1;Parent=gene-O5D79_004950;Dbxref=NCBI_GP:HJH9166312.1;Name=HJH9166312.1;Ontology_term=GO:0019068;gbkey=CDS;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000093955.1;locus_tag=O5D79_004950;product=head-tail joining protein;protein_id=HJH9166312.1;transl_table=11 DALFDJ020000043.1 tpg gene 15693 16367 . + . ID=gene-O5D79_004951;Name=O5D79_004951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004951 DALFDJ020000043.1 Protein Homology CDS 15693 16367 . + 0 ID=cds-HJH9166313.1;Parent=gene-O5D79_004951;Dbxref=NCBI_GP:HJH9166313.1;Name=HJH9166313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728996.1;locus_tag=O5D79_004951;product=hypothetical protein;protein_id=HJH9166313.1;transl_table=11 DALFDJ020000043.1 tpg gene 16364 16921 . + . ID=gene-O5D79_004952;Name=O5D79_004952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004952 DALFDJ020000043.1 Protein Homology CDS 16364 16921 . + 0 ID=cds-HJH9166314.1;Parent=gene-O5D79_004952;Dbxref=NCBI_GP:HJH9166314.1;Name=HJH9166314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001728997.1;locus_tag=O5D79_004952;product=hypothetical protein;protein_id=HJH9166314.1;transl_table=11 DALFDJ020000043.1 tpg gene 16893 17804 . + . ID=gene-O5D79_004953;Name=O5D79_004953;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004953 DALFDJ020000043.1 Protein Homology CDS 16893 17804 . + 0 ID=cds-HJH9166315.1;Parent=gene-O5D79_004953;Dbxref=NCBI_GP:HJH9166315.1;Name=HJH9166315.1;Ontology_term=GO:0098003,GO:0046872,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_function=metal ion binding|0046872||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079173.1;locus_tag=O5D79_004953;product=phage baseplate assembly protein V;protein_id=HJH9166315.1;transl_table=11 DALFDJ020000043.1 tpg gene 17811 18155 . + . ID=gene-O5D79_004954;Name=O5D79_004954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004954 DALFDJ020000043.1 Protein Homology CDS 17811 18155 . + 0 ID=cds-HJH9166316.1;Parent=gene-O5D79_004954;Dbxref=NCBI_GP:HJH9166316.1;Name=HJH9166316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001729000.1;locus_tag=O5D79_004954;product=GPW/gp25 family protein;protein_id=HJH9166316.1;transl_table=11 DALFDJ020000043.1 tpg gene 18152 19072 . + . ID=gene-O5D79_004955;Name=O5D79_004955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004955 DALFDJ020000043.1 Protein Homology CDS 18152 19072 . + 0 ID=cds-HJH9166317.1;Parent=gene-O5D79_004955;Dbxref=NCBI_GP:HJH9166317.1;Name=HJH9166317.1;Ontology_term=GO:0098045,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_process=virus baseplate assembly|0098045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001729001.1;locus_tag=O5D79_004955;product=baseplate assembly protein;protein_id=HJH9166317.1;transl_table=11 DALFDJ020000043.1 tpg gene 19075 19689 . + . ID=gene-O5D79_004956;Name=O5D79_004956;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004956 DALFDJ020000043.1 Protein Homology CDS 19075 19689 . + 0 ID=cds-HJH9166318.1;Parent=gene-O5D79_004956;Dbxref=NCBI_GP:HJH9166318.1;Name=HJH9166318.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203860.1;locus_tag=O5D79_004956;product=phage tail protein I;protein_id=HJH9166318.1;transl_table=11 DALFDJ020000043.1 tpg gene 19693 20766 . + . ID=gene-O5D79_004957;Name=O5D79_004957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004957 DALFDJ020000043.1 Protein Homology CDS 19693 20766 . + 0 ID=cds-HJH9166319.1;Parent=gene-O5D79_004957;Dbxref=NCBI_GP:HJH9166319.1;Name=HJH9166319.1;Ontology_term=GO:0098024;gbkey=CDS;go_component=virus tail%2C fiber|0098024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001729003.1;locus_tag=O5D79_004957;product=phage tail protein;protein_id=HJH9166319.1;transl_table=11 DALFDJ020000043.1 tpg gene 20768 21163 . + . ID=gene-O5D79_004958;Name=O5D79_004958;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004958 DALFDJ020000043.1 Protein Homology CDS 20768 21163 . + 0 ID=cds-HJH9166320.1;Parent=gene-O5D79_004958;Dbxref=NCBI_GP:HJH9166320.1;Name=HJH9166320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000626358.1;locus_tag=O5D79_004958;product=hypothetical protein;protein_id=HJH9166320.1;transl_table=11 DALFDJ020000043.1 tpg gene 21160 22668 . + . ID=gene-O5D79_004959;Name=O5D79_004959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004959 DALFDJ020000043.1 Protein Homology CDS 21160 22668 . + 0 ID=cds-HJH9166321.1;Parent=gene-O5D79_004959;Dbxref=NCBI_GP:HJH9166321.1;Name=HJH9166321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000117510.1;locus_tag=O5D79_004959;product=phage tail sheath C-terminal domain-containing protein;protein_id=HJH9166321.1;transl_table=11 DALFDJ020000043.1 tpg gene 22686 23198 . + . ID=gene-O5D79_004960;Name=O5D79_004960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004960 DALFDJ020000043.1 Protein Homology CDS 22686 23198 . + 0 ID=cds-HJH9166322.1;Parent=gene-O5D79_004960;Dbxref=NCBI_GP:HJH9166322.1;Name=HJH9166322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001285189.1;locus_tag=O5D79_004960;product=phage major tail tube protein;protein_id=HJH9166322.1;transl_table=11 DALFDJ020000043.1 tpg gene 23215 23502 . + . ID=gene-O5D79_004961;Name=O5D79_004961;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004961 DALFDJ020000043.1 Protein Homology CDS 23215 23502 . + 0 ID=cds-HJH9166323.1;Parent=gene-O5D79_004961;Dbxref=NCBI_GP:HJH9166323.1;Name=HJH9166323.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001729006.1;locus_tag=O5D79_004961;product=phage tail assembly protein;protein_id=HJH9166323.1;transl_table=11 DALFDJ020000043.1 tpg gene 23605 23931 . + . ID=gene-O5D79_004962;Name=O5D79_004962;end_range=23931,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004962;partial=true DALFDJ020000043.1 Protein Homology CDS 23605 23931 . + 0 ID=cds-HJH9166324.1;Parent=gene-O5D79_004962;Dbxref=NCBI_GP:HJH9166324.1;Name=HJH9166324.1;end_range=23931,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018352.1;locus_tag=O5D79_004962;partial=true;product=hypothetical protein;protein_id=HJH9166324.1;transl_table=11 ##sequence-region DALFDJ020000044.1 1 19789 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000044.1 tpg region 1 19789 . + . ID=DALFDJ020000044.1:1..19789;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000044.1 tpg gene 4 80 . - . ID=gene-O5D79_004963;Name=O5D79_004963;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_004963 DALFDJ020000044.1 tRNAscan-SE tRNA 4 80 . - . ID=rna-O5D79_004963;Parent=gene-O5D79_004963;anticodon=(pos:complement(44..46));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004963;product=tRNA-Arg DALFDJ020000044.1 tRNAscan-SE exon 4 80 . - . ID=exon-O5D79_004963-1;Parent=rna-O5D79_004963;anticodon=(pos:complement(44..46));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004963;product=tRNA-Arg DALFDJ020000044.1 tpg gene 89 415 . - . ID=gene-O5D79_004964;Name=O5D79_004964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004964 DALFDJ020000044.1 Protein Homology CDS 89 415 . - 0 ID=cds-HJH9166325.1;Parent=gene-O5D79_004964;Dbxref=NCBI_GP:HJH9166325.1;Name=HJH9166325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460228.1;locus_tag=O5D79_004964;product=four-helix bundle copper-binding protein;protein_id=HJH9166325.1;transl_table=11 DALFDJ020000044.1 tpg gene 609 1742 . + . ID=gene-O5D79_004965;Name=O5D79_004965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004965 DALFDJ020000044.1 Protein Homology CDS 609 1742 . + 0 ID=cds-HJH9166326.1;Parent=gene-O5D79_004965;Dbxref=NCBI_GP:HJH9166326.1;Name=HJH9166326.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460227.1;locus_tag=O5D79_004965;product=mechanosensitive ion channel family protein;protein_id=HJH9166326.1;transl_table=11 DALFDJ020000044.1 tpg gene 1824 2414 . - . ID=gene-O5D79_004966;Name=O5D79_004966;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004966 DALFDJ020000044.1 Protein Homology CDS 1824 2414 . - 0 ID=cds-HJH9166327.1;Parent=gene-O5D79_004966;Dbxref=NCBI_GP:HJH9166327.1;Name=HJH9166327.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460226.1;locus_tag=O5D79_004966;product=ATP-binding cassette domain-containing protein;protein_id=HJH9166327.1;transl_table=11 DALFDJ020000044.1 tpg gene 2408 3205 . - . ID=gene-O5D79_004967;Name=O5D79_004967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004967 DALFDJ020000044.1 Protein Homology CDS 2408 3205 . - 0 ID=cds-HJH9166328.1;Parent=gene-O5D79_004967;Dbxref=NCBI_GP:HJH9166328.1;Name=HJH9166328.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460225.1;locus_tag=O5D79_004967;product=ATP-binding cassette domain-containing protein;protein_id=HJH9166328.1;transl_table=11 DALFDJ020000044.1 tpg gene 3199 4011 . - . ID=gene-O5D79_004968;Name=O5D79_004968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004968 DALFDJ020000044.1 Protein Homology CDS 3199 4011 . - 0 ID=cds-HJH9166329.1;Parent=gene-O5D79_004968;Dbxref=NCBI_GP:HJH9166329.1;Name=HJH9166329.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460224.1;locus_tag=O5D79_004968;product=ABC transporter permease;protein_id=HJH9166329.1;transl_table=11 DALFDJ020000044.1 tpg gene 4001 4975 . - . ID=gene-O5D79_004969;Name=O5D79_004969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004969 DALFDJ020000044.1 Protein Homology CDS 4001 4975 . - 0 ID=cds-HJH9166330.1;Parent=gene-O5D79_004969;Dbxref=NCBI_GP:HJH9166330.1;Name=HJH9166330.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460223.1;locus_tag=O5D79_004969;product=ABC transporter permease;protein_id=HJH9166330.1;transl_table=11 DALFDJ020000044.1 tpg gene 4975 6609 . - . ID=gene-O5D79_004970;Name=O5D79_004970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004970 DALFDJ020000044.1 Protein Homology CDS 4975 6609 . - 0 ID=cds-HJH9166331.1;Parent=gene-O5D79_004970;Dbxref=NCBI_GP:HJH9166331.1;Name=HJH9166331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460222.1;locus_tag=O5D79_004970;product=ABC transporter substrate-binding protein;protein_id=HJH9166331.1;transl_table=11 DALFDJ020000044.1 tpg gene 7291 7605 . + . ID=gene-O5D79_004971;Name=O5D79_004971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004971 DALFDJ020000044.1 Protein Homology CDS 7291 7605 . + 0 ID=cds-HJH9166332.1;Parent=gene-O5D79_004971;Dbxref=NCBI_GP:HJH9166332.1;Name=HJH9166332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460221.1;locus_tag=O5D79_004971;product=TRL-like family protein;protein_id=HJH9166332.1;transl_table=11 DALFDJ020000044.1 tpg gene 7754 8284 . + . ID=gene-O5D79_004972;Name=O5D79_004972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004972 DALFDJ020000044.1 Protein Homology CDS 7754 8284 . + 0 ID=cds-HJH9166333.1;Parent=gene-O5D79_004972;Dbxref=NCBI_GP:HJH9166333.1;Name=HJH9166333.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460220.1;locus_tag=O5D79_004972;product=cytochrome b;protein_id=HJH9166333.1;transl_table=11 DALFDJ020000044.1 tpg gene 8367 9410 . - . ID=gene-O5D79_004973;Name=O5D79_004973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004973 DALFDJ020000044.1 Protein Homology CDS 8367 9410 . - 0 ID=cds-HJH9166334.1;Parent=gene-O5D79_004973;Dbxref=NCBI_GP:HJH9166334.1;Name=HJH9166334.1;Ontology_term=GO:0005975,GO:0004308,GO:0016997;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA,alpha-sialidase activity|0016997||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460219.1;locus_tag=O5D79_004973;product=sialidase family protein;protein_id=HJH9166334.1;transl_table=11 DALFDJ020000044.1 tpg gene 9749 10216 . - . ID=gene-O5D79_004974;Name=O5D79_004974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004974 DALFDJ020000044.1 Protein Homology CDS 9749 10216 . - 0 ID=cds-HJH9166335.1;Parent=gene-O5D79_004974;Dbxref=NCBI_GP:HJH9166335.1;Name=HJH9166335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460218.1;locus_tag=O5D79_004974;product=Hsp20 family protein;protein_id=HJH9166335.1;transl_table=11 DALFDJ020000044.1 tpg pseudogene 10369 10641 . - . ID=gene-O5D79_004975;Name=O5D79_004975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004975;pseudo=true DALFDJ020000044.1 Protein Homology CDS 10369 10641 . - 0 ID=cds-O5D79_004975;Parent=gene-O5D79_004975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460217.1;locus_tag=O5D79_004975;product=hypothetical protein;pseudo=true;transl_table=11 DALFDJ020000044.1 tpg gene 11344 11688 . + . ID=gene-O5D79_004976;Name=O5D79_004976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004976 DALFDJ020000044.1 Protein Homology CDS 11344 11688 . + 0 ID=cds-HJH9166336.1;Parent=gene-O5D79_004976;Dbxref=NCBI_GP:HJH9166336.1;Name=HJH9166336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460216.1;locus_tag=O5D79_004976;product=c-type lysozyme inhibitor;protein_id=HJH9166336.1;transl_table=11 DALFDJ020000044.1 tpg gene 12443 12519 . - . ID=gene-O5D79_004977;Name=O5D79_004977;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_004977 DALFDJ020000044.1 tRNAscan-SE tRNA 12443 12519 . - . ID=rna-O5D79_004977;Parent=gene-O5D79_004977;anticodon=(pos:complement(12483..12485));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004977;product=tRNA-Arg DALFDJ020000044.1 tRNAscan-SE exon 12443 12519 . - . ID=exon-O5D79_004977-1;Parent=rna-O5D79_004977;anticodon=(pos:complement(12483..12485));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004977;product=tRNA-Arg DALFDJ020000044.1 tpg gene 12925 13482 . - . ID=gene-O5D79_004978;Name=pagC;gbkey=Gene;gene=pagC;gene_biotype=protein_coding;locus_tag=O5D79_004978 DALFDJ020000044.1 Protein Homology CDS 12925 13482 . - 0 ID=cds-HJH9166337.1;Parent=gene-O5D79_004978;Dbxref=NCBI_GP:HJH9166337.1;Name=HJH9166337.1;gbkey=CDS;gene=pagC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460215.1;locus_tag=O5D79_004978;product=virulence membrane protein PagC;protein_id=HJH9166337.1;transl_table=11 DALFDJ020000044.1 tpg gene 14287 14550 . + . ID=gene-O5D79_004979;Name=pagD;gbkey=Gene;gene=pagD;gene_biotype=protein_coding;locus_tag=O5D79_004979 DALFDJ020000044.1 Protein Homology CDS 14287 14550 . + 0 ID=cds-HJH9166338.1;Parent=gene-O5D79_004979;Dbxref=NCBI_GP:HJH9166338.1;Name=HJH9166338.1;gbkey=CDS;gene=pagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460214.1;locus_tag=O5D79_004979;product=virulence protein PagD;protein_id=HJH9166338.1;transl_table=11 DALFDJ020000044.1 tpg gene 14682 14894 . + . ID=gene-O5D79_004980;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=protein_coding;locus_tag=O5D79_004980 DALFDJ020000044.1 Protein Homology CDS 14682 14894 . + 0 ID=cds-HJH9166339.1;Parent=gene-O5D79_004980;Dbxref=NCBI_GP:HJH9166339.1;Name=HJH9166339.1;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460213.1;locus_tag=O5D79_004980;product=cold shock-like protein CspF;protein_id=HJH9166339.1;transl_table=11 DALFDJ020000044.1 tpg gene 15311 15832 . + . ID=gene-O5D79_004981;Name=O5D79_004981;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004981 DALFDJ020000044.1 Protein Homology CDS 15311 15832 . + 0 ID=cds-HJH9166340.1;Parent=gene-O5D79_004981;Dbxref=NCBI_GP:HJH9166340.1;Name=HJH9166340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460212.1;locus_tag=O5D79_004981;product=ricin-type beta-trefoil lectin domain protein;protein_id=HJH9166340.1;transl_table=11 DALFDJ020000044.1 tpg gene 16023 16262 . + . ID=gene-O5D79_004982;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;locus_tag=O5D79_004982 DALFDJ020000044.1 Protein Homology CDS 16023 16262 . + 0 ID=cds-HJH9166341.1;Parent=gene-O5D79_004982;Dbxref=NCBI_GP:HJH9166341.1;Name=HJH9166341.1;gbkey=CDS;gene=msgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460211.1;locus_tag=O5D79_004982;product=virulence protein MsgA;protein_id=HJH9166341.1;transl_table=11 DALFDJ020000044.1 tpg gene 16752 17540 . + . ID=gene-O5D79_004983;Name=envF;gbkey=Gene;gene=envF;gene_biotype=protein_coding;locus_tag=O5D79_004983 DALFDJ020000044.1 Protein Homology CDS 16752 17540 . + 0 ID=cds-HJH9166342.1;Parent=gene-O5D79_004983;Dbxref=NCBI_GP:HJH9166342.1;Name=HJH9166342.1;gbkey=CDS;gene=envF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460210.1;locus_tag=O5D79_004983;product=putative envelope lipoprotein EnvF;protein_id=HJH9166342.1;transl_table=11 DALFDJ020000044.1 tpg gene 17862 18068 . + . ID=gene-O5D79_004984;Name=O5D79_004984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004984 DALFDJ020000044.1 Protein Homology CDS 17862 18068 . + 0 ID=cds-HJH9166343.1;Parent=gene-O5D79_004984;Dbxref=NCBI_GP:HJH9166343.1;Name=HJH9166343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000787631.1;locus_tag=O5D79_004984;product=hypothetical protein;protein_id=HJH9166343.1;transl_table=11 DALFDJ020000044.1 tpg pseudogene 18344 18409 . - . ID=gene-O5D79_004985;Name=O5D79_004985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004985;pseudo=true DALFDJ020000044.1 Protein Homology CDS 18344 18409 . - 0 ID=cds-O5D79_004985;Parent=gene-O5D79_004985;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011264264.1;locus_tag=O5D79_004985;product=phage tail protein;pseudo=true;transl_table=11 DALFDJ020000044.1 tpg gene 18535 19659 . - . ID=gene-O5D79_004986;Name=sopF;gbkey=Gene;gene=sopF;gene_biotype=protein_coding;locus_tag=O5D79_004986 DALFDJ020000044.1 Protein Homology CDS 18535 19659 . - 0 ID=cds-HJH9166344.1;Parent=gene-O5D79_004986;Dbxref=NCBI_GP:HJH9166344.1;Name=HJH9166344.1;gbkey=CDS;gene=sopF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460209.1;locus_tag=O5D79_004986;product=type III secretion system effector SopF;protein_id=HJH9166344.1;transl_table=11 ##sequence-region DALFDJ020000045.1 1 14969 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000045.1 tpg region 1 14969 . + . ID=DALFDJ020000045.1:1..14969;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000045.1 tpg gene 1070 1822 . + . ID=gene-O5D79_004987;Name=O5D79_004987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004987 DALFDJ020000045.1 Protein Homology CDS 1070 1822 . + 0 ID=cds-HJH9166345.1;Parent=gene-O5D79_004987;Dbxref=NCBI_GP:HJH9166345.1;Name=HJH9166345.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008925993.1;locus_tag=O5D79_004987;product=fimbria/pilus periplasmic chaperone;protein_id=HJH9166345.1;transl_table=11 DALFDJ020000045.1 tpg gene 1946 4456 . + . ID=gene-O5D79_004988;Name=O5D79_004988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004988 DALFDJ020000045.1 Protein Homology CDS 1946 4456 . + 0 ID=cds-HJH9166346.1;Parent=gene-O5D79_004988;Dbxref=NCBI_GP:HJH9166346.1;Name=HJH9166346.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750512.1;locus_tag=O5D79_004988;product=fimbria/pilus outer membrane usher protein;protein_id=HJH9166346.1;transl_table=11 DALFDJ020000045.1 tpg gene 4663 5148 . + . ID=gene-O5D79_004989;Name=O5D79_004989;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004989 DALFDJ020000045.1 GeneMarkS-2+ CDS 4663 5148 . + 0 ID=cds-HJH9166347.1;Parent=gene-O5D79_004989;Dbxref=NCBI_GP:HJH9166347.1;Name=HJH9166347.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004989;product=hypothetical protein;protein_id=HJH9166347.1;transl_table=11 DALFDJ020000045.1 tpg gene 5324 6262 . + . ID=gene-O5D79_004990;Name=O5D79_004990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004990 DALFDJ020000045.1 Protein Homology CDS 5324 6262 . + 0 ID=cds-HJH9166348.1;Parent=gene-O5D79_004990;Dbxref=NCBI_GP:HJH9166348.1;Name=HJH9166348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812557.1;locus_tag=O5D79_004990;product=hypothetical protein;protein_id=HJH9166348.1;transl_table=11 DALFDJ020000045.1 tpg gene 7411 7521 . + . ID=gene-O5D79_004991;Name=O5D79_004991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004991 DALFDJ020000045.1 Protein Homology CDS 7411 7521 . + 0 ID=cds-HJH9166349.1;Parent=gene-O5D79_004991;Dbxref=NCBI_GP:HJH9166349.1;Name=HJH9166349.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018403.6;locus_tag=O5D79_004991;product=DUF1187 family protein;protein_id=HJH9166349.1;transl_table=11 DALFDJ020000045.1 tpg pseudogene 7830 8117 . + . ID=gene-O5D79_004992;Name=O5D79_004992;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_004992;pseudo=true DALFDJ020000045.1 Protein Homology CDS 7830 8117 . + 0 ID=cds-O5D79_004992;Parent=gene-O5D79_004992;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: protein motif:HMM:NF018262.6;locus_tag=O5D79_004992;product=antiterminator Q family protein;pseudo=true;transl_table=11 DALFDJ020000045.1 tpg gene 8064 8432 . - . ID=gene-O5D79_004993;Name=O5D79_004993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004993 DALFDJ020000045.1 GeneMarkS-2+ CDS 8064 8432 . - 0 ID=cds-HJH9166350.1;Parent=gene-O5D79_004993;Dbxref=NCBI_GP:HJH9166350.1;Name=HJH9166350.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004993;product=hypothetical protein;protein_id=HJH9166350.1;transl_table=11 DALFDJ020000045.1 tpg gene 8464 8808 . - . ID=gene-O5D79_004994;Name=O5D79_004994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004994 DALFDJ020000045.1 GeneMarkS-2+ CDS 8464 8808 . - 0 ID=cds-HJH9166351.1;Parent=gene-O5D79_004994;Dbxref=NCBI_GP:HJH9166351.1;Name=HJH9166351.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004994;product=hypothetical protein;protein_id=HJH9166351.1;transl_table=11 DALFDJ020000045.1 tpg gene 8822 9220 . - . ID=gene-O5D79_004995;Name=O5D79_004995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004995 DALFDJ020000045.1 GeneMarkS-2+ CDS 8822 9220 . - 0 ID=cds-HJH9166352.1;Parent=gene-O5D79_004995;Dbxref=NCBI_GP:HJH9166352.1;Name=HJH9166352.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004995;product=hypothetical protein;protein_id=HJH9166352.1;transl_table=11 DALFDJ020000045.1 tpg gene 9578 9654 . + . ID=gene-O5D79_004996;Name=O5D79_004996;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_004996 DALFDJ020000045.1 tRNAscan-SE tRNA 9578 9654 . + . ID=rna-O5D79_004996;Parent=gene-O5D79_004996;anticodon=(pos:9612..9614);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004996;product=tRNA-Ile DALFDJ020000045.1 tRNAscan-SE exon 9578 9654 . + . ID=exon-O5D79_004996-1;Parent=rna-O5D79_004996;anticodon=(pos:9612..9614);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_004996;product=tRNA-Ile DALFDJ020000045.1 tpg gene 9894 11162 . + . ID=gene-O5D79_004997;Name=O5D79_004997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004997 DALFDJ020000045.1 Protein Homology CDS 9894 11162 . + 0 ID=cds-HJH9166353.1;Parent=gene-O5D79_004997;Dbxref=NCBI_GP:HJH9166353.1;Name=HJH9166353.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012541215.1;locus_tag=O5D79_004997;product=tyrosine-type recombinase/integrase;protein_id=HJH9166353.1;transl_table=11 DALFDJ020000045.1 tpg gene 12611 13087 . - . ID=gene-O5D79_004998;Name=O5D79_004998;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004998 DALFDJ020000045.1 Protein Homology CDS 12611 13087 . - 0 ID=cds-HJH9166354.1;Parent=gene-O5D79_004998;Dbxref=NCBI_GP:HJH9166354.1;Name=HJH9166354.1;Ontology_term=GO:0006351;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: protein motif:HMM:NF018838.6;locus_tag=O5D79_004998;product=CaiF/GrlA family transcriptional regulator;protein_id=HJH9166354.1;transl_table=11 DALFDJ020000045.1 tpg gene 13378 14319 . - . ID=gene-O5D79_004999;Name=O5D79_004999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_004999 DALFDJ020000045.1 GeneMarkS-2+ CDS 13378 14319 . - 0 ID=cds-HJH9166355.1;Parent=gene-O5D79_004999;Dbxref=NCBI_GP:HJH9166355.1;Name=HJH9166355.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_004999;product=fimbrial protein;protein_id=HJH9166355.1;transl_table=11 DALFDJ020000045.1 tpg gene 14352 14969 . - . ID=gene-O5D79_005000;Name=O5D79_005000;end_range=14969,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005000;partial=true DALFDJ020000045.1 Protein Homology CDS 14352 14969 . - 0 ID=cds-HJH9166356.1;Parent=gene-O5D79_005000;Dbxref=NCBI_GP:HJH9166356.1;Name=HJH9166356.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;end_range=14969,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: protein motif:HMM:NF012786.6;locus_tag=O5D79_005000;partial=true;product=fimbria/pilus outer membrane usher protein;protein_id=HJH9166356.1;transl_table=11 ##sequence-region DALFDJ020000046.1 1 10988 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000046.1 tpg region 1 10988 . + . ID=DALFDJ020000046.1:1..10988;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000046.1 tpg gene 1 539 . - . ID=gene-O5D79_005001;Name=cueP;gbkey=Gene;gene=cueP;gene_biotype=protein_coding;locus_tag=O5D79_005001;partial=true;start_range=.,1 DALFDJ020000046.1 Protein Homology CDS 1 539 . - 0 ID=cds-HJH9166357.1;Parent=gene-O5D79_005001;Dbxref=NCBI_GP:HJH9166357.1;Name=HJH9166357.1;gbkey=CDS;gene=cueP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462551.1;locus_tag=O5D79_005001;partial=true;product=copper-binding periplasmic metallochaperone CueP;protein_id=HJH9166357.1;start_range=.,1;transl_table=11 DALFDJ020000046.1 tpg gene 713 925 . - . ID=gene-O5D79_005002;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=O5D79_005002 DALFDJ020000046.1 Protein Homology CDS 713 925 . - 0 ID=cds-HJH9166358.1;Parent=gene-O5D79_005002;Dbxref=NCBI_GP:HJH9166358.1;Name=HJH9166358.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=O5D79_005002;product=transcription antiterminator/RNA stability regulator CspE;protein_id=HJH9166358.1;transl_table=11 DALFDJ020000046.1 tpg gene 1213 1503 . - . ID=gene-O5D79_005003;Name=O5D79_005003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005003 DALFDJ020000046.1 Protein Homology CDS 1213 1503 . - 0 ID=cds-HJH9166359.1;Parent=gene-O5D79_005003;Dbxref=NCBI_GP:HJH9166359.1;Name=HJH9166359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462549.1;locus_tag=O5D79_005003;product=HTH-type transcriptional regulator;protein_id=HJH9166359.1;transl_table=11 DALFDJ020000046.1 tpg gene 1942 2652 . + . ID=gene-O5D79_005004;Name=O5D79_005004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005004 DALFDJ020000046.1 Protein Homology CDS 1942 2652 . + 0 ID=cds-HJH9166360.1;Parent=gene-O5D79_005004;Dbxref=NCBI_GP:HJH9166360.1;Name=HJH9166360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462548.1;locus_tag=O5D79_005004;product=DUF3053 domain-containing protein;protein_id=HJH9166360.1;transl_table=11 DALFDJ020000046.1 tpg gene 2702 3676 . - . ID=gene-O5D79_005005;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=O5D79_005005 DALFDJ020000046.1 Protein Homology CDS 2702 3676 . - 0 ID=cds-HJH9166361.1;Parent=gene-O5D79_005005;Dbxref=NCBI_GP:HJH9166361.1;Name=HJH9166361.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462547.1;locus_tag=O5D79_005005;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=HJH9166361.1;transl_table=11 DALFDJ020000046.1 tpg gene 3895 4557 . - . ID=gene-O5D79_005006;Name=O5D79_005006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005006 DALFDJ020000046.1 Protein Homology CDS 3895 4557 . - 0 ID=cds-HJH9166362.1;Parent=gene-O5D79_005006;Dbxref=NCBI_GP:HJH9166362.1;Name=HJH9166362.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462546.1;locus_tag=O5D79_005006;product=OmpA family lipoprotein;protein_id=HJH9166362.1;transl_table=11 DALFDJ020000046.1 tpg gene 4710 7043 . + . ID=gene-O5D79_005007;Name=O5D79_005007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005007 DALFDJ020000046.1 Protein Homology CDS 4710 7043 . + 0 ID=cds-HJH9166363.1;Parent=gene-O5D79_005007;Dbxref=NCBI_GP:HJH9166363.1;Name=HJH9166363.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462545.1;locus_tag=O5D79_005007;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=HJH9166363.1;transl_table=11 DALFDJ020000046.1 tpg gene 7012 7452 . - . ID=gene-O5D79_005008;Name=O5D79_005008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005008 DALFDJ020000046.1 Protein Homology CDS 7012 7452 . - 0 ID=cds-HJH9166364.1;Parent=gene-O5D79_005008;Dbxref=NCBI_GP:HJH9166364.1;Name=HJH9166364.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462544.1;locus_tag=O5D79_005008;product=N-acetyltransferase;protein_id=HJH9166364.1;transl_table=11 DALFDJ020000046.1 tpg gene 7430 8011 . - . ID=gene-O5D79_005009;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=O5D79_005009 DALFDJ020000046.1 Protein Homology CDS 7430 8011 . - 0 ID=cds-HJH9166365.1;Parent=gene-O5D79_005009;Dbxref=NCBI_GP:HJH9166365.1;Name=HJH9166365.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462543.1;locus_tag=O5D79_005009;product=DNA-3-methyladenine glycosylase I;protein_id=HJH9166365.1;transl_table=11 DALFDJ020000046.1 tpg gene 8167 8871 . + . ID=gene-O5D79_005010;Name=O5D79_005010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005010 DALFDJ020000046.1 Protein Homology CDS 8167 8871 . + 0 ID=cds-HJH9166366.1;Parent=gene-O5D79_005010;Dbxref=NCBI_GP:HJH9166366.1;Name=HJH9166366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462542.1;locus_tag=O5D79_005010;product=autotransporter domain-containing protein;protein_id=HJH9166366.1;transl_table=11 DALFDJ020000046.1 tpg gene 9102 10793 . + . ID=gene-O5D79_005011;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=O5D79_005011 DALFDJ020000046.1 Protein Homology CDS 9102 10793 . + 0 ID=cds-HJH9166367.1;Parent=gene-O5D79_005011;Dbxref=NCBI_GP:HJH9166367.1;Name=HJH9166367.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462536.1;locus_tag=O5D79_005011;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=HJH9166367.1;transl_table=11 DALFDJ020000046.1 tpg gene 10884 10960 . + . ID=gene-O5D79_005012;Name=O5D79_005012;gbkey=Gene;gene_biotype=tRNA;locus_tag=O5D79_005012 DALFDJ020000046.1 tRNAscan-SE tRNA 10884 10960 . + . ID=rna-O5D79_005012;Parent=gene-O5D79_005012;anticodon=(pos:10918..10920);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_005012;product=tRNA-Pro DALFDJ020000046.1 tRNAscan-SE exon 10884 10960 . + . ID=exon-O5D79_005012-1;Parent=rna-O5D79_005012;anticodon=(pos:10918..10920);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=O5D79_005012;product=tRNA-Pro ##sequence-region DALFDJ020000047.1 1 9841 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000047.1 tpg region 1 9841 . + . ID=DALFDJ020000047.1:1..9841;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000047.1 tpg gene 1 3480 . + . ID=gene-O5D79_005013;Name=O5D79_005013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005013;partial=true;start_range=.,1 DALFDJ020000047.1 Protein Homology CDS 1 3480 . + 0 ID=cds-HJH9166368.1;Parent=gene-O5D79_005013;Dbxref=NCBI_GP:HJH9166368.1;Name=HJH9166368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784111.1;locus_tag=O5D79_005013;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=HJH9166368.1;start_range=.,1;transl_table=11 DALFDJ020000047.1 tpg gene 3486 3806 . + . ID=gene-O5D79_005014;Name=O5D79_005014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005014 DALFDJ020000047.1 Protein Homology CDS 3486 3806 . + 0 ID=cds-HJH9166369.1;Parent=gene-O5D79_005014;Dbxref=NCBI_GP:HJH9166369.1;Name=HJH9166369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000623017.1;locus_tag=O5D79_005014;product=hypothetical protein;protein_id=HJH9166369.1;transl_table=11 DALFDJ020000047.1 tpg gene 3930 4241 . - . ID=gene-O5D79_005015;Name=O5D79_005015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005015 DALFDJ020000047.1 Protein Homology CDS 3930 4241 . - 0 ID=cds-HJH9166370.1;Parent=gene-O5D79_005015;Dbxref=NCBI_GP:HJH9166370.1;Name=HJH9166370.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000807557.1;locus_tag=O5D79_005015;product=SymE family type I addiction module toxin;protein_id=HJH9166370.1;transl_table=11 DALFDJ020000047.1 tpg gene 4316 4714 . - . ID=gene-O5D79_005016;Name=O5D79_005016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005016 DALFDJ020000047.1 Protein Homology CDS 4316 4714 . - 0 ID=cds-HJH9166371.1;Parent=gene-O5D79_005016;Dbxref=NCBI_GP:HJH9166371.1;Name=HJH9166371.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401944.1;locus_tag=O5D79_005016;product=helix-turn-helix domain-containing protein;protein_id=HJH9166371.1;transl_table=11 DALFDJ020000047.1 tpg gene 4812 7784 . + . ID=gene-O5D79_005017;Name=O5D79_005017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005017 DALFDJ020000047.1 Protein Homology CDS 4812 7784 . + 0 ID=cds-HJH9166372.1;Parent=gene-O5D79_005017;Dbxref=NCBI_GP:HJH9166372.1;Name=HJH9166372.1;Ontology_term=GO:0006260,GO:0003677,GO:0003899,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,zinc ion binding|0008270||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004172037.1;locus_tag=O5D79_005017;product=CHC2 zinc finger domain-containing protein;protein_id=HJH9166372.1;transl_table=11 DALFDJ020000047.1 tpg gene 7987 9021 . + . ID=gene-O5D79_005018;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=O5D79_005018 DALFDJ020000047.1 Protein Homology CDS 7987 9021 . + 0 ID=cds-HJH9166373.1;Parent=gene-O5D79_005018;Dbxref=NCBI_GP:HJH9166373.1;Name=HJH9166373.1;gbkey=CDS;gene=xerC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001755634.1;locus_tag=O5D79_005018;product=site-specific tyrosine recombinase XerC;protein_id=HJH9166373.1;transl_table=11 DALFDJ020000047.1 tpg gene 9022 9312 . + . ID=gene-O5D79_005019;Name=O5D79_005019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005019 DALFDJ020000047.1 GeneMarkS-2+ CDS 9022 9312 . + 0 ID=cds-HJH9166374.1;Parent=gene-O5D79_005019;Dbxref=NCBI_GP:HJH9166374.1;Name=HJH9166374.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_005019;product=hypothetical protein;protein_id=HJH9166374.1;transl_table=11 DALFDJ020000047.1 tpg gene 9572 9745 . + . ID=gene-O5D79_005020;Name=O5D79_005020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005020 DALFDJ020000047.1 GeneMarkS-2+ CDS 9572 9745 . + 0 ID=cds-HJH9166375.1;Parent=gene-O5D79_005020;Dbxref=NCBI_GP:HJH9166375.1;Name=HJH9166375.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_005020;product=hypothetical protein;protein_id=HJH9166375.1;transl_table=11 ##sequence-region DALFDJ020000048.1 1 5892 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000048.1 tpg region 1 5892 . + . ID=DALFDJ020000048.1:1..5892;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000048.1 tpg gene 1 89 . + . ID=gene-O5D79_005021;Name=O5D79_005021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005021;partial=true;start_range=.,1 DALFDJ020000048.1 Protein Homology CDS 1 89 . + 2 ID=cds-HJH9166376.1;Parent=gene-O5D79_005021;Dbxref=NCBI_GP:HJH9166376.1;Name=HJH9166376.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=O5D79_005021;partial=true;product=IS3 family transposase;protein_id=HJH9166376.1;start_range=.,1;transl_table=11 DALFDJ020000048.1 tpg pseudogene 107 361 . - . ID=gene-O5D79_005022;Name=O5D79_005022;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_005022;pseudo=true DALFDJ020000048.1 Protein Homology CDS 107 361 . - 0 ID=cds-O5D79_005022;Parent=gene-O5D79_005022;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225313.1;locus_tag=O5D79_005022;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000048.1 tpg gene 720 2435 . - . ID=gene-O5D79_005023;Name=O5D79_005023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005023 DALFDJ020000048.1 Protein Homology CDS 720 2435 . - 0 ID=cds-HJH9166377.1;Parent=gene-O5D79_005023;Dbxref=NCBI_GP:HJH9166377.1;Name=HJH9166377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000583954.1;locus_tag=O5D79_005023;product=DUF2326 domain-containing protein;protein_id=HJH9166377.1;transl_table=11 DALFDJ020000048.1 tpg gene 2419 2667 . - . ID=gene-O5D79_005024;Name=O5D79_005024;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005024 DALFDJ020000048.1 Protein Homology CDS 2419 2667 . - 0 ID=cds-HJH9166378.1;Parent=gene-O5D79_005024;Dbxref=NCBI_GP:HJH9166378.1;Name=HJH9166378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000915843.1;locus_tag=O5D79_005024;product=hypothetical protein;protein_id=HJH9166378.1;transl_table=11 DALFDJ020000048.1 tpg gene 2667 3626 . - . ID=gene-O5D79_005025;Name=O5D79_005025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005025 DALFDJ020000048.1 Protein Homology CDS 2667 3626 . - 0 ID=cds-HJH9166379.1;Parent=gene-O5D79_005025;Dbxref=NCBI_GP:HJH9166379.1;Name=HJH9166379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000957732.1;locus_tag=O5D79_005025;product=SMEK domain-containing protein;protein_id=HJH9166379.1;transl_table=11 DALFDJ020000048.1 tpg gene 4156 4428 . - . ID=gene-O5D79_005026;Name=O5D79_005026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005026 DALFDJ020000048.1 Protein Homology CDS 4156 4428 . - 0 ID=cds-HJH9166380.1;Parent=gene-O5D79_005026;Dbxref=NCBI_GP:HJH9166380.1;Name=HJH9166380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308323.1;locus_tag=O5D79_005026;product=ogr/Delta-like zinc finger family protein;protein_id=HJH9166380.1;transl_table=11 DALFDJ020000048.1 tpg gene 4428 5189 . - . ID=gene-O5D79_005027;Name=O5D79_005027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005027 DALFDJ020000048.1 Protein Homology CDS 4428 5189 . - 0 ID=cds-HJH9166381.1;Parent=gene-O5D79_005027;Dbxref=NCBI_GP:HJH9166381.1;Name=HJH9166381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066197.1;locus_tag=O5D79_005027;product=septation initiation protein;protein_id=HJH9166381.1;transl_table=11 DALFDJ020000048.1 tpg gene 5590 5892 . - . ID=gene-O5D79_005028;Name=O5D79_005028;end_range=5892,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005028;partial=true DALFDJ020000048.1 Protein Homology CDS 5590 5892 . - 0 ID=cds-HJH9166382.1;Parent=gene-O5D79_005028;Dbxref=NCBI_GP:HJH9166382.1;Name=HJH9166382.1;end_range=5892,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211874.1;locus_tag=O5D79_005028;partial=true;product=alkaline-shock protein;protein_id=HJH9166382.1;transl_table=11 ##sequence-region DALFDJ020000049.1 1 5172 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000049.1 tpg region 1 5172 . + . ID=DALFDJ020000049.1:1..5172;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000049.1 tpg pseudogene 1 1289 . - . ID=gene-O5D79_005029;Name=O5D79_005029;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_005029;pseudo=true DALFDJ020000049.1 Protein Homology CDS 1 1289 . - 0 ID=cds-O5D79_005029;Parent=gene-O5D79_005029;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014621.1;locus_tag=O5D79_005029;product=RHS domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000049.1 tpg gene 1315 1527 . - . ID=gene-O5D79_005030;Name=O5D79_005030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005030 DALFDJ020000049.1 Protein Homology CDS 1315 1527 . - 0 ID=cds-HJH9166383.1;Parent=gene-O5D79_005030;Dbxref=NCBI_GP:HJH9166383.1;Name=HJH9166383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534622.1;locus_tag=O5D79_005030;product=nuclear receptor NHR-99;protein_id=HJH9166383.1;transl_table=11 DALFDJ020000049.1 tpg pseudogene 1588 3818 . - . ID=gene-O5D79_005031;Name=O5D79_005031;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_005031;pseudo=true DALFDJ020000049.1 Protein Homology CDS 1588 3818 . - 0 ID=cds-O5D79_005031;Parent=gene-O5D79_005031;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238642.1;locus_tag=O5D79_005031;product=RHS repeat-associated core domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000049.1 tpg pseudogene 3907 4218 . - . ID=gene-O5D79_005032;Name=O5D79_005032;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_005032;pseudo=true DALFDJ020000049.1 Protein Homology CDS 3907 4218 . - 0 ID=cds-O5D79_005032;Parent=gene-O5D79_005032;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517246.1;locus_tag=O5D79_005032;product=PstS family phosphate ABC transporter substrate-binding protein;pseudo=true;transl_table=11 DALFDJ020000049.1 tpg gene 4323 4619 . - . ID=gene-O5D79_005033;Name=O5D79_005033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005033 DALFDJ020000049.1 Protein Homology CDS 4323 4619 . - 0 ID=cds-HJH9166384.1;Parent=gene-O5D79_005033;Dbxref=NCBI_GP:HJH9166384.1;Name=HJH9166384.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026967.6;locus_tag=O5D79_005033;product=NTF2 fold immunity protein;protein_id=HJH9166384.1;transl_table=11 DALFDJ020000049.1 tpg gene 4645 5172 . - . ID=gene-O5D79_005034;Name=O5D79_005034;end_range=5172,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005034;partial=true DALFDJ020000049.1 Protein Homology CDS 4645 5172 . - 0 ID=cds-HJH9166385.1;Parent=gene-O5D79_005034;Dbxref=NCBI_GP:HJH9166385.1;Name=HJH9166385.1;end_range=5172,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025581.6;locus_tag=O5D79_005034;partial=true;product=DUF4329 domain-containing protein;protein_id=HJH9166385.1;transl_table=11 ##sequence-region DALFDJ020000050.1 1 5110 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000050.1 tpg region 1 5110 . + . ID=DALFDJ020000050.1:1..5110;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000050.1 tpg gene 302 874 . + . ID=gene-O5D79_005035;Name=hin;gbkey=Gene;gene=hin;gene_biotype=protein_coding;locus_tag=O5D79_005035 DALFDJ020000050.1 Protein Homology CDS 302 874 . + 0 ID=cds-HJH9166386.1;Parent=gene-O5D79_005035;Dbxref=NCBI_GP:HJH9166386.1;Name=HJH9166386.1;gbkey=CDS;gene=hin;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461699.1;locus_tag=O5D79_005035;product=flagellar phase variation DNA invertase Hin;protein_id=HJH9166386.1;transl_table=11 DALFDJ020000050.1 tpg gene 1238 2758 . + . ID=gene-O5D79_005036;Name=O5D79_005036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005036 DALFDJ020000050.1 Protein Homology CDS 1238 2758 . + 0 ID=cds-HJH9166387.1;Parent=gene-O5D79_005036;Dbxref=NCBI_GP:HJH9166387.1;Name=HJH9166387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461698.1;locus_tag=O5D79_005036;product=FliC/FljB family flagellin;protein_id=HJH9166387.1;transl_table=11 DALFDJ020000050.1 tpg gene 2826 3365 . + . ID=gene-O5D79_005037;Name=fljA;gbkey=Gene;gene=fljA;gene_biotype=protein_coding;locus_tag=O5D79_005037 DALFDJ020000050.1 Protein Homology CDS 2826 3365 . + 0 ID=cds-HJH9166388.1;Parent=gene-O5D79_005037;Dbxref=NCBI_GP:HJH9166388.1;Name=HJH9166388.1;gbkey=CDS;gene=fljA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461697.1;locus_tag=O5D79_005037;product=phase 1 flagellin gene repressor FljA;protein_id=HJH9166388.1;transl_table=11 DALFDJ020000050.1 tpg pseudogene 3393 3614 . + . ID=gene-O5D79_005038;Name=O5D79_005038;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_005038;pseudo=true DALFDJ020000050.1 Protein Homology CDS 3393 3614 . + 0 ID=cds-O5D79_005038;Parent=gene-O5D79_005038;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784655.1;locus_tag=O5D79_005038;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 DALFDJ020000050.1 tpg gene 4194 4397 . + . ID=gene-O5D79_005039;Name=O5D79_005039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005039 DALFDJ020000050.1 Protein Homology CDS 4194 4397 . + 0 ID=cds-HJH9166389.1;Parent=gene-O5D79_005039;Dbxref=NCBI_GP:HJH9166389.1;Name=HJH9166389.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005188750.1;locus_tag=O5D79_005039;product=helix-turn-helix transcriptional regulator;protein_id=HJH9166389.1;transl_table=11 ##sequence-region DALFDJ020000051.1 1 4112 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000051.1 tpg region 1 4112 . + . ID=DALFDJ020000051.1:1..4112;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000051.1 tpg gene 1 551 . - . ID=gene-O5D79_005040;Name=O5D79_005040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005040;partial=true;start_range=.,1 DALFDJ020000051.1 GeneMarkS-2+ CDS 1 551 . - 0 ID=cds-HJH9166390.1;Parent=gene-O5D79_005040;Dbxref=NCBI_GP:HJH9166390.1;Name=HJH9166390.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_005040;partial=true;product=hypothetical protein;protein_id=HJH9166390.1;start_range=.,1;transl_table=11 DALFDJ020000051.1 tpg gene 618 1181 . - . ID=gene-O5D79_005041;Name=O5D79_005041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005041 DALFDJ020000051.1 GeneMarkS-2+ CDS 618 1181 . - 0 ID=cds-HJH9166391.1;Parent=gene-O5D79_005041;Dbxref=NCBI_GP:HJH9166391.1;Name=HJH9166391.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_005041;product=fimbrial protein;protein_id=HJH9166391.1;transl_table=11 DALFDJ020000051.1 tpg gene 2561 2725 . + . ID=gene-O5D79_005042;Name=O5D79_005042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005042 DALFDJ020000051.1 GeneMarkS-2+ CDS 2561 2725 . + 0 ID=cds-HJH9166392.1;Parent=gene-O5D79_005042;Dbxref=NCBI_GP:HJH9166392.1;Name=HJH9166392.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_005042;product=hypothetical protein;protein_id=HJH9166392.1;transl_table=11 ##sequence-region DALFDJ020000052.1 1 3940 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000052.1 tpg region 1 3940 . + . ID=DALFDJ020000052.1:1..3940;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000052.1 tpg gene 110 1000 . - . ID=gene-O5D79_005043;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=O5D79_005043 DALFDJ020000052.1 Protein Homology CDS 110 1000 . - 0 ID=cds-HJH9166393.1;Parent=gene-O5D79_005043;Dbxref=NCBI_GP:HJH9166393.1;Name=HJH9166393.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463092.1;locus_tag=O5D79_005043;product=maltose ABC transporter permease MalG;protein_id=HJH9166393.1;transl_table=11 DALFDJ020000052.1 tpg gene 1015 2559 . - . ID=gene-O5D79_005044;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=O5D79_005044 DALFDJ020000052.1 Protein Homology CDS 1015 2559 . - 0 ID=cds-HJH9166394.1;Parent=gene-O5D79_005044;Dbxref=NCBI_GP:HJH9166394.1;Name=HJH9166394.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=O5D79_005044;product=maltose ABC transporter permease MalF;protein_id=HJH9166394.1;transl_table=11 DALFDJ020000052.1 tpg pseudogene 2602 2742 . + . ID=gene-O5D79_005045;Name=O5D79_005045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_005045;pseudo=true DALFDJ020000052.1 Protein Homology CDS 2602 2742 . + 0 ID=cds-O5D79_005045;Parent=gene-O5D79_005045;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463146.1;locus_tag=O5D79_005045;product=hypothetical protein;pseudo=true;transl_table=11 DALFDJ020000052.1 tpg gene 2691 3881 . - . ID=gene-O5D79_005046;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=O5D79_005046 DALFDJ020000052.1 Protein Homology CDS 2691 3881 . - 0 ID=cds-HJH9166395.1;Parent=gene-O5D79_005046;Dbxref=NCBI_GP:HJH9166395.1;Name=HJH9166395.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=O5D79_005046;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=HJH9166395.1;transl_table=11 ##sequence-region DALFDJ020000053.1 1 3555 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000053.1 tpg region 1 3555 . + . ID=DALFDJ020000053.1:1..3555;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000053.1 tpg gene 1 301 . + . ID=gene-O5D79_005047;Name=O5D79_005047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005047;partial=true;start_range=.,1 DALFDJ020000053.1 Protein Homology CDS 1 301 . + 1 ID=cds-HJH9166396.1;Parent=gene-O5D79_005047;Dbxref=NCBI_GP:HJH9166396.1;Name=HJH9166396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813187.1;locus_tag=O5D79_005047;partial=true;product=DUF7666 domain-containing protein;protein_id=HJH9166396.1;start_range=.,1;transl_table=11 DALFDJ020000053.1 tpg gene 370 570 . + . ID=gene-O5D79_005048;Name=O5D79_005048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005048 DALFDJ020000053.1 Protein Homology CDS 370 570 . + 0 ID=cds-HJH9166397.1;Parent=gene-O5D79_005048;Dbxref=NCBI_GP:HJH9166397.1;Name=HJH9166397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000532743.1;locus_tag=O5D79_005048;product=DUF7167 family protein;protein_id=HJH9166397.1;transl_table=11 DALFDJ020000053.1 tpg gene 722 1036 . + . ID=gene-O5D79_005049;Name=O5D79_005049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005049 DALFDJ020000053.1 Protein Homology CDS 722 1036 . + 0 ID=cds-HJH9166398.1;Parent=gene-O5D79_005049;Dbxref=NCBI_GP:HJH9166398.1;Name=HJH9166398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000776962.1;locus_tag=O5D79_005049;product=superinfection exclusion protein;protein_id=HJH9166398.1;transl_table=11 DALFDJ020000053.1 tpg gene 1121 1279 . + . ID=gene-O5D79_005050;Name=O5D79_005050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005050 DALFDJ020000053.1 Protein Homology CDS 1121 1279 . + 0 ID=cds-HJH9166399.1;Parent=gene-O5D79_005050;Dbxref=NCBI_GP:HJH9166399.1;Name=HJH9166399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582314.1;locus_tag=O5D79_005050;product=protease FtsH-inhibitory lysogeny factor CIII;protein_id=HJH9166399.1;transl_table=11 DALFDJ020000053.1 tpg gene 1260 1448 . + . ID=gene-O5D79_005051;Name=O5D79_005051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005051 DALFDJ020000053.1 Protein Homology CDS 1260 1448 . + 0 ID=cds-HJH9166400.1;Parent=gene-O5D79_005051;Dbxref=NCBI_GP:HJH9166400.1;Name=HJH9166400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749553.1;locus_tag=O5D79_005051;product=DUF5444 family protein;protein_id=HJH9166400.1;transl_table=11 DALFDJ020000053.1 tpg gene 1438 1581 . + . ID=gene-O5D79_005052;Name=O5D79_005052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005052 DALFDJ020000053.1 Protein Homology CDS 1438 1581 . + 0 ID=cds-HJH9166401.1;Parent=gene-O5D79_005052;Dbxref=NCBI_GP:HJH9166401.1;Name=HJH9166401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000902093.1;locus_tag=O5D79_005052;product=hypothetical protein;protein_id=HJH9166401.1;transl_table=11 DALFDJ020000053.1 tpg gene 1578 2285 . + . ID=gene-O5D79_005053;Name=O5D79_005053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005053 DALFDJ020000053.1 Protein Homology CDS 1578 2285 . + 0 ID=cds-HJH9166402.1;Parent=gene-O5D79_005053;Dbxref=NCBI_GP:HJH9166402.1;Name=HJH9166402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231971.1;locus_tag=O5D79_005053;product=Rad52/Rad22 family DNA repair protein;protein_id=HJH9166402.1;transl_table=11 DALFDJ020000053.1 tpg gene 2285 2569 . + . ID=gene-O5D79_005054;Name=O5D79_005054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005054 DALFDJ020000053.1 Protein Homology CDS 2285 2569 . + 0 ID=cds-HJH9166403.1;Parent=gene-O5D79_005054;Dbxref=NCBI_GP:HJH9166403.1;Name=HJH9166403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001253481.1;locus_tag=O5D79_005054;product=sigma-70 family RNA polymerase sigma factor;protein_id=HJH9166403.1;transl_table=11 DALFDJ020000053.1 tpg gene 2616 2909 . + . ID=gene-O5D79_005055;Name=O5D79_005055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005055 DALFDJ020000053.1 Protein Homology CDS 2616 2909 . + 0 ID=cds-HJH9166404.1;Parent=gene-O5D79_005055;Dbxref=NCBI_GP:HJH9166404.1;Name=HJH9166404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001111277.1;locus_tag=O5D79_005055;product=phage anti-RecBCD protein;protein_id=HJH9166404.1;transl_table=11 DALFDJ020000053.1 tpg gene 2920 3090 . + . ID=gene-O5D79_005056;Name=O5D79_005056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005056 DALFDJ020000053.1 Protein Homology CDS 2920 3090 . + 0 ID=cds-HJH9166405.1;Parent=gene-O5D79_005056;Dbxref=NCBI_GP:HJH9166405.1;Name=HJH9166405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001214771.1;locus_tag=O5D79_005056;product=DUF2737 family protein;protein_id=HJH9166405.1;transl_table=11 DALFDJ020000053.1 tpg gene 3087 3555 . + . ID=gene-O5D79_005057;Name=O5D79_005057;end_range=3555,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005057;partial=true DALFDJ020000053.1 Protein Homology CDS 3087 3555 . + 0 ID=cds-HJH9166406.1;Parent=gene-O5D79_005057;Dbxref=NCBI_GP:HJH9166406.1;Name=HJH9166406.1;end_range=3555,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000665857.1;locus_tag=O5D79_005057;partial=true;product=hypothetical protein;protein_id=HJH9166406.1;transl_table=11 ##sequence-region DALFDJ020000054.1 1 3401 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000054.1 tpg region 1 3401 . + . ID=DALFDJ020000054.1:1..3401;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000054.1 tpg gene 1 345 . - . ID=gene-O5D79_005058;Name=O5D79_005058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005058;partial=true;start_range=.,1 DALFDJ020000054.1 GeneMarkS-2+ CDS 1 345 . - 0 ID=cds-HJH9166407.1;Parent=gene-O5D79_005058;Dbxref=NCBI_GP:HJH9166407.1;Name=HJH9166407.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_005058;partial=true;product=hypothetical protein;protein_id=HJH9166407.1;start_range=.,1;transl_table=11 DALFDJ020000054.1 tpg gene 260 604 . - . ID=gene-O5D79_005059;Name=O5D79_005059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005059 DALFDJ020000054.1 GeneMarkS-2+ CDS 260 604 . - 0 ID=cds-HJH9166408.1;Parent=gene-O5D79_005059;Dbxref=NCBI_GP:HJH9166408.1;Name=HJH9166408.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_005059;product=hypothetical protein;protein_id=HJH9166408.1;transl_table=11 DALFDJ020000054.1 tpg gene 971 1420 . + . ID=gene-O5D79_005060;Name=O5D79_005060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005060 DALFDJ020000054.1 Protein Homology CDS 971 1420 . + 0 ID=cds-HJH9166409.1;Parent=gene-O5D79_005060;Dbxref=NCBI_GP:HJH9166409.1;Name=HJH9166409.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662352.1;locus_tag=O5D79_005060;product=SymE family type I addiction module toxin;protein_id=HJH9166409.1;transl_table=11 DALFDJ020000054.1 tpg gene 1624 2073 . - . ID=gene-O5D79_005061;Name=O5D79_005061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005061 DALFDJ020000054.1 GeneMarkS-2+ CDS 1624 2073 . - 0 ID=cds-HJH9166410.1;Parent=gene-O5D79_005061;Dbxref=NCBI_GP:HJH9166410.1;Name=HJH9166410.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_005061;product=hypothetical protein;protein_id=HJH9166410.1;transl_table=11 DALFDJ020000054.1 tpg gene 2073 3401 . - . ID=gene-O5D79_005062;Name=O5D79_005062;end_range=3401,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005062;partial=true DALFDJ020000054.1 Protein Homology CDS 2073 3401 . - 0 ID=cds-HJH9166411.1;Parent=gene-O5D79_005062;Dbxref=NCBI_GP:HJH9166411.1;Name=HJH9166411.1;end_range=3401,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542648.1;locus_tag=O5D79_005062;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=HJH9166411.1;transl_table=11 ##sequence-region DALFDJ020000055.1 1 3035 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000055.1 tpg region 1 3035 . + . ID=DALFDJ020000055.1:1..3035;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000055.1 tpg gene 1 258 . - . ID=gene-O5D79_005063;Name=O5D79_005063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005063;partial=true;start_range=.,1 DALFDJ020000055.1 Protein Homology CDS 1 258 . - 0 ID=cds-HJH9166412.1;Parent=gene-O5D79_005063;Dbxref=NCBI_GP:HJH9166412.1;Name=HJH9166412.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=O5D79_005063;partial=true;product=transposase;protein_id=HJH9166412.1;start_range=.,1;transl_table=11 DALFDJ020000055.1 tpg gene 453 902 . - . ID=gene-O5D79_005064;Name=O5D79_005064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005064 DALFDJ020000055.1 Protein Homology CDS 453 902 . - 0 ID=cds-HJH9166413.1;Parent=gene-O5D79_005064;Dbxref=NCBI_GP:HJH9166413.1;Name=HJH9166413.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675827.1;locus_tag=O5D79_005064;product=tetratricopeptide repeat protein;protein_id=HJH9166413.1;transl_table=11 DALFDJ020000055.1 tpg gene 965 1420 . - . ID=gene-O5D79_005065;Name=O5D79_005065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005065 DALFDJ020000055.1 Protein Homology CDS 965 1420 . - 0 ID=cds-HJH9166414.1;Parent=gene-O5D79_005065;Dbxref=NCBI_GP:HJH9166414.1;Name=HJH9166414.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675351.1;locus_tag=O5D79_005065;product=tetratricopeptide repeat protein;protein_id=HJH9166414.1;transl_table=11 DALFDJ020000055.1 tpg gene 1488 1916 . - . ID=gene-O5D79_005066;Name=O5D79_005066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005066 DALFDJ020000055.1 Protein Homology CDS 1488 1916 . - 0 ID=cds-HJH9166415.1;Parent=gene-O5D79_005066;Dbxref=NCBI_GP:HJH9166415.1;Name=HJH9166415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662368.1;locus_tag=O5D79_005066;product=hypothetical protein;protein_id=HJH9166415.1;transl_table=11 DALFDJ020000055.1 tpg gene 2151 2546 . - . ID=gene-O5D79_005067;Name=O5D79_005067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005067 DALFDJ020000055.1 GeneMarkS-2+ CDS 2151 2546 . - 0 ID=cds-HJH9166416.1;Parent=gene-O5D79_005067;Dbxref=NCBI_GP:HJH9166416.1;Name=HJH9166416.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_005067;product=hypothetical protein;protein_id=HJH9166416.1;transl_table=11 DALFDJ020000055.1 tpg gene 2583 3035 . - . ID=gene-O5D79_005068;Name=O5D79_005068;end_range=3035,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005068;partial=true DALFDJ020000055.1 Protein Homology CDS 2583 3035 . - 0 ID=cds-HJH9166417.1;Parent=gene-O5D79_005068;Dbxref=NCBI_GP:HJH9166417.1;Name=HJH9166417.1;end_range=3035,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000509054.1;locus_tag=O5D79_005068;partial=true;product=type IV secretion protein Rhs;protein_id=HJH9166417.1;transl_table=11 ##sequence-region DALFDJ020000056.1 1 2974 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000056.1 tpg region 1 2974 . + . ID=DALFDJ020000056.1:1..2974;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000056.1 tpg gene 1 1943 . + . ID=gene-O5D79_005069;Name=O5D79_005069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005069;partial=true;start_range=.,1 DALFDJ020000056.1 Protein Homology CDS 1 1943 . + 2 ID=cds-HJH9166418.1;Parent=gene-O5D79_005069;Dbxref=NCBI_GP:HJH9166418.1;Name=HJH9166418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542648.1;locus_tag=O5D79_005069;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=HJH9166418.1;start_range=.,1;transl_table=11 DALFDJ020000056.1 tpg gene 1958 2581 . + . ID=gene-O5D79_005070;Name=O5D79_005070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005070 DALFDJ020000056.1 Protein Homology CDS 1958 2581 . + 0 ID=cds-HJH9166419.1;Parent=gene-O5D79_005070;Dbxref=NCBI_GP:HJH9166419.1;Name=HJH9166419.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042775.4;locus_tag=O5D79_005070;product=DUF6707 family protein;protein_id=HJH9166419.1;transl_table=11 DALFDJ020000056.1 tpg gene 2692 2970 . - . ID=gene-O5D79_005071;Name=O5D79_005071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005071 DALFDJ020000056.1 Protein Homology CDS 2692 2970 . - 0 ID=cds-HJH9166420.1;Parent=gene-O5D79_005071;Dbxref=NCBI_GP:HJH9166420.1;Name=HJH9166420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632802.1;locus_tag=O5D79_005071;product=SymE family type I addiction module toxin;protein_id=HJH9166420.1;transl_table=11 ##sequence-region DALFDJ020000057.1 1 1534 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000057.1 tpg region 1 1534 . + . ID=DALFDJ020000057.1:1..1534;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000057.1 tpg gene 1 376 . + . ID=gene-O5D79_005072;Name=O5D79_005072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005072;partial=true;start_range=.,1 DALFDJ020000057.1 Protein Homology CDS 1 376 . + 1 ID=cds-HJH9166421.1;Parent=gene-O5D79_005072;Dbxref=NCBI_GP:HJH9166421.1;Name=HJH9166421.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022224.6;locus_tag=O5D79_005072;partial=true;product=phage protein NinX family protein;protein_id=HJH9166421.1;start_range=.,1;transl_table=11 DALFDJ020000057.1 tpg gene 373 1158 . + . ID=gene-O5D79_005073;Name=O5D79_005073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005073 DALFDJ020000057.1 GeneMarkS-2+ CDS 373 1158 . + 0 ID=cds-HJH9166422.1;Parent=gene-O5D79_005073;Dbxref=NCBI_GP:HJH9166422.1;Name=HJH9166422.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=O5D79_005073;product=hypothetical protein;protein_id=HJH9166422.1;transl_table=11 DALFDJ020000057.1 tpg gene 1158 1534 . + . ID=gene-O5D79_005074;Name=O5D79_005074;end_range=1534,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005074;partial=true DALFDJ020000057.1 Protein Homology CDS 1158 1534 . + 0 ID=cds-HJH9166423.1;Parent=gene-O5D79_005074;Dbxref=NCBI_GP:HJH9166423.1;Name=HJH9166423.1;Ontology_term=GO:0008168,GO:1904047;end_range=1534,.;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000840609.1;locus_tag=O5D79_005074;partial=true;product=class I SAM-dependent methyltransferase;protein_id=HJH9166423.1;transl_table=11 ##sequence-region DALFDJ020000058.1 1 1236 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000058.1 tpg region 1 1236 . + . ID=DALFDJ020000058.1:1..1236;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000058.1 tpg gene 3 482 . + . ID=gene-O5D79_005075;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=O5D79_005075 DALFDJ020000058.1 Protein Homology CDS 3 482 . + 0 ID=cds-HJH9166424.1;Parent=gene-O5D79_005075;Dbxref=NCBI_GP:HJH9166424.1;Name=HJH9166424.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461193.1;locus_tag=O5D79_005075;product=cytochrome c maturation protein CcmE;protein_id=HJH9166424.1;transl_table=11 DALFDJ020000058.1 tpg gene 479 1236 . + . ID=gene-O5D79_005076;Name=ccsA;end_range=1236,.;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=O5D79_005076;partial=true DALFDJ020000058.1 Protein Homology CDS 479 1236 . + 0 ID=cds-HJH9166425.1;Parent=gene-O5D79_005076;Dbxref=NCBI_GP:HJH9166425.1;Name=HJH9166425.1;Ontology_term=GO:0017004,GO:0020037;end_range=1236,.;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461192.1;locus_tag=O5D79_005076;partial=true;product=cytochrome c biogenesis protein CcsA;protein_id=HJH9166425.1;transl_table=11 ##sequence-region DALFDJ020000059.1 1 1235 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000059.1 tpg region 1 1235 . + . ID=DALFDJ020000059.1:1..1235;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000059.1 tpg gene 37 1235 . + . ID=gene-O5D79_005077;Name=O5D79_005077;end_range=1235,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005077;partial=true DALFDJ020000059.1 Protein Homology CDS 37 1235 . + 0 ID=cds-HJH9166426.1;Parent=gene-O5D79_005077;Dbxref=NCBI_GP:HJH9166426.1;Name=HJH9166426.1;Ontology_term=GO:0004803;end_range=1235,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005176946.1;locus_tag=O5D79_005077;partial=true;product=IS256 family transposase;protein_id=HJH9166426.1;transl_table=11 ##sequence-region DALFDJ020000060.1 1 1196 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000060.1 tpg region 1 1196 . + . ID=DALFDJ020000060.1:1..1196;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000060.1 tpg gene 1 1196 . + . ID=gene-O5D79_005078;Name=O5D79_005078;end_range=1196,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005078;partial=true;start_range=.,1 DALFDJ020000060.1 Protein Homology CDS 1 1196 . + 0 ID=cds-HJH9166427.1;Parent=gene-O5D79_005078;Dbxref=NCBI_GP:HJH9166427.1;Name=HJH9166427.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;end_range=1196,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: protein motif:HMM:NF012786.6;locus_tag=O5D79_005078;partial=true;product=fimbria/pilus outer membrane usher protein;protein_id=HJH9166427.1;start_range=.,1;transl_table=11 ##sequence-region DALFDJ020000061.1 1 1171 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000061.1 tpg region 1 1171 . + . ID=DALFDJ020000061.1:1..1171;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000061.1 tpg gene 1 367 . + . ID=gene-O5D79_005079;Name=O5D79_005079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005079;partial=true;start_range=.,1 DALFDJ020000061.1 Protein Homology CDS 1 367 . + 1 ID=cds-HJH9166428.1;Parent=gene-O5D79_005079;Dbxref=NCBI_GP:HJH9166428.1;Name=HJH9166428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001684644.1;locus_tag=O5D79_005079;partial=true;product=DUF5448 family protein;protein_id=HJH9166428.1;start_range=.,1;transl_table=11 DALFDJ020000061.1 tpg gene 364 795 . + . ID=gene-O5D79_005080;Name=O5D79_005080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005080 DALFDJ020000061.1 Protein Homology CDS 364 795 . + 0 ID=cds-HJH9166429.1;Parent=gene-O5D79_005080;Dbxref=NCBI_GP:HJH9166429.1;Name=HJH9166429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000065093.1;locus_tag=O5D79_005080;product=ead/Ea22-like family protein;protein_id=HJH9166429.1;transl_table=11 DALFDJ020000061.1 tpg gene 795 1171 . + . ID=gene-O5D79_005081;Name=O5D79_005081;end_range=1171,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005081;partial=true DALFDJ020000061.1 Protein Homology CDS 795 1171 . + 0 ID=cds-HJH9166430.1;Parent=gene-O5D79_005081;Dbxref=NCBI_GP:HJH9166430.1;Name=HJH9166430.1;end_range=1171,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000840609.1;locus_tag=O5D79_005081;partial=true;product=SAM-dependent methyltransferase;protein_id=HJH9166430.1;transl_table=11 ##sequence-region DALFDJ020000062.1 1 1113 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000062.1 tpg region 1 1113 . + . ID=DALFDJ020000062.1:1..1113;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000062.1 tpg gene 15 1113 . + . ID=gene-O5D79_005082;Name=O5D79_005082;end_range=1113,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005082;partial=true DALFDJ020000062.1 Protein Homology CDS 15 276 . + 0 ID=cds-HJH9166431.1;Parent=gene-O5D79_005082;Dbxref=NCBI_GP:HJH9166431.1;Name=HJH9166431.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=O5D79_005082;partial=true;product=IS3 family transposase;protein_id=HJH9166431.1;transl_table=11 DALFDJ020000062.1 Protein Homology CDS 276 1113 . + 2 ID=cds-HJH9166431.1;Parent=gene-O5D79_005082;Dbxref=NCBI_GP:HJH9166431.1;Name=HJH9166431.1;Note=programmed frameshift;Ontology_term=GO:0004803;end_range=1113,.;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=O5D79_005082;partial=true;product=IS3 family transposase;protein_id=HJH9166431.1;transl_table=11 ##sequence-region DALFDJ020000063.1 1 1082 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000063.1 tpg region 1 1082 . + . ID=DALFDJ020000063.1:1..1082;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000063.1 tpg gene 1 1082 . + . ID=gene-O5D79_005083;Name=O5D79_005083;end_range=1082,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005083;partial=true;start_range=.,1 DALFDJ020000063.1 Protein Homology CDS 1 1082 . + 0 ID=cds-HJH9166432.1;Parent=gene-O5D79_005083;Dbxref=NCBI_GP:HJH9166432.1;Name=HJH9166432.1;end_range=1082,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211874.1;locus_tag=O5D79_005083;partial=true;product=DUF927 domain-containing protein;protein_id=HJH9166432.1;start_range=.,1;transl_table=11 ##sequence-region DALFDJ020000064.1 1 1082 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000064.1 tpg region 1 1082 . + . ID=DALFDJ020000064.1:1..1082;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000064.1 tpg gene 1 1082 . + . ID=gene-O5D79_005084;Name=O5D79_005084;end_range=1082,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005084;partial=true;start_range=.,1 DALFDJ020000064.1 Protein Homology CDS 1 1082 . + 0 ID=cds-HJH9166433.1;Parent=gene-O5D79_005084;Dbxref=NCBI_GP:HJH9166433.1;Name=HJH9166433.1;end_range=1082,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211874.1;locus_tag=O5D79_005084;partial=true;product=DUF927 domain-containing protein;protein_id=HJH9166433.1;start_range=.,1;transl_table=11 ##sequence-region DALFDJ020000065.1 1 986 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000065.1 tpg region 1 986 . + . ID=DALFDJ020000065.1:1..986;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000065.1 tpg gene 1 986 . - . ID=gene-O5D79_005085;Name=O5D79_005085;end_range=986,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005085;partial=true;start_range=.,1 DALFDJ020000065.1 Protein Homology CDS 1 986 . - 0 ID=cds-HJH9166434.1;Parent=gene-O5D79_005085;Dbxref=NCBI_GP:HJH9166434.1;Name=HJH9166434.1;Ontology_term=GO:0030246;end_range=986,.;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542648.1;locus_tag=O5D79_005085;partial=true;product=RHS repeat domain-containing protein;protein_id=HJH9166434.1;start_range=.,1;transl_table=11 ##sequence-region DALFDJ020000066.1 1 798 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000066.1 tpg region 1 798 . + . ID=DALFDJ020000066.1:1..798;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000066.1 tpg gene 1 798 . - . ID=gene-O5D79_005086;Name=O5D79_005086;end_range=798,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005086;partial=true;start_range=.,1 DALFDJ020000066.1 Protein Homology CDS 1 798 . - 0 ID=cds-HJH9166435.1;Parent=gene-O5D79_005086;Dbxref=NCBI_GP:HJH9166435.1;Name=HJH9166435.1;Ontology_term=GO:0006313,GO:0004803;end_range=798,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611657.1;locus_tag=O5D79_005086;partial=true;product=IS3-like element ISSen1 family transposase;protein_id=HJH9166435.1;start_range=.,1;transl_table=11 ##sequence-region DALFDJ020000067.1 1 793 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000067.1 tpg region 1 793 . + . ID=DALFDJ020000067.1:1..793;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000067.1 tpg gene 108 755 . + . ID=gene-O5D79_005087;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=O5D79_005087 DALFDJ020000067.1 Protein Homology CDS 108 755 . + 0 ID=cds-HJH9166436.1;Parent=gene-O5D79_005087;Dbxref=NCBI_GP:HJH9166436.1;Name=HJH9166436.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460229.3;locus_tag=O5D79_005087;product=metal-binding protein ZinT;protein_id=HJH9166436.1;transl_table=11 ##sequence-region DALFDJ020000068.1 1 792 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000068.1 tpg region 1 792 . + . ID=DALFDJ020000068.1:1..792;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000068.1 tpg gene 337 792 . + . ID=gene-O5D79_005088;Name=O5D79_005088;end_range=792,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005088;partial=true DALFDJ020000068.1 Protein Homology CDS 337 792 . + 0 ID=cds-HJH9166437.1;Parent=gene-O5D79_005088;Dbxref=NCBI_GP:HJH9166437.1;Name=HJH9166437.1;end_range=792,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273407.1;locus_tag=O5D79_005088;partial=true;product=hypothetical protein;protein_id=HJH9166437.1;transl_table=11 ##sequence-region DALFDJ020000069.1 1 725 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000069.1 tpg region 1 725 . + . ID=DALFDJ020000069.1:1..725;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000069.1 tpg gene 73 725 . + . ID=gene-O5D79_005089;Name=O5D79_005089;end_range=725,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005089;partial=true DALFDJ020000069.1 Protein Homology CDS 73 725 . + 0 ID=cds-HJH9166438.1;Parent=gene-O5D79_005089;Dbxref=NCBI_GP:HJH9166438.1;Name=HJH9166438.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;end_range=725,.;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: protein motif:HMM:NF012565.6;locus_tag=O5D79_005089;partial=true;product=fimbrial biogenesis chaperone;protein_id=HJH9166438.1;transl_table=11 ##sequence-region DALFDJ020000070.1 1 717 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000070.1 tpg region 1 717 . + . ID=DALFDJ020000070.1:1..717;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000070.1 tpg pseudogene 1 717 . + . ID=gene-O5D79_005090;Name=O5D79_005090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=O5D79_005090;pseudo=true DALFDJ020000070.1 Protein Homology CDS 1 717 . + 2 ID=cds-O5D79_005090;Parent=gene-O5D79_005090;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=O5D79_005090;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region DALFDJ020000071.1 1 513 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000071.1 tpg region 1 513 . + . ID=DALFDJ020000071.1:1..513;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000071.1 tpg gene 1 513 . + . ID=gene-O5D79_005091;Name=O5D79_005091;end_range=513,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005091;partial=true;start_range=.,1 DALFDJ020000071.1 Protein Homology CDS 1 513 . + 0 ID=cds-HJH9166439.1;Parent=gene-O5D79_005091;Dbxref=NCBI_GP:HJH9166439.1;Name=HJH9166439.1;end_range=513,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000045488.1;locus_tag=O5D79_005091;partial=true;product=hypothetical protein;protein_id=HJH9166439.1;start_range=.,1;transl_table=11 ##sequence-region DALFDJ020000072.1 1 487 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000072.1 tpg region 1 487 . + . ID=DALFDJ020000072.1:1..487;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000072.1 tpg gene 1 487 . + . ID=gene-O5D79_005092;Name=O5D79_005092;end_range=487,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=O5D79_005092;partial=true;start_range=.,1 DALFDJ020000072.1 cmsearch rRNA 1 487 . + . ID=rna-O5D79_005092;Parent=gene-O5D79_005092;Dbxref=RFAM:RF00177;end_range=487,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_005092;partial=true;product=16S ribosomal RNA;start_range=.,1 DALFDJ020000072.1 cmsearch exon 1 487 . + . ID=exon-O5D79_005092-1;Parent=rna-O5D79_005092;Dbxref=RFAM:RF00177;end_range=487,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_005092;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region DALFDJ020000073.1 1 481 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000073.1 tpg region 1 481 . + . ID=DALFDJ020000073.1:1..481;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000073.1 tpg gene 1 481 . + . ID=gene-O5D79_005093;Name=O5D79_005093;end_range=481,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=O5D79_005093;partial=true;start_range=.,1 DALFDJ020000073.1 cmsearch rRNA 1 481 . + . ID=rna-O5D79_005093;Parent=gene-O5D79_005093;Dbxref=RFAM:RF02541;end_range=481,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_005093;partial=true;product=23S ribosomal RNA;start_range=.,1 DALFDJ020000073.1 cmsearch exon 1 481 . + . ID=exon-O5D79_005093-1;Parent=rna-O5D79_005093;Dbxref=RFAM:RF02541;end_range=481,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_005093;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region DALFDJ020000074.1 1 479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000074.1 tpg region 1 479 . + . ID=DALFDJ020000074.1:1..479;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000074.1 tpg gene 1 479 . + . ID=gene-O5D79_005094;Name=O5D79_005094;end_range=479,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=O5D79_005094;partial=true;start_range=.,1 DALFDJ020000074.1 cmsearch rRNA 1 479 . + . ID=rna-O5D79_005094;Parent=gene-O5D79_005094;Dbxref=RFAM:RF02541;end_range=479,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_005094;partial=true;product=23S ribosomal RNA;start_range=.,1 DALFDJ020000074.1 cmsearch exon 1 479 . + . ID=exon-O5D79_005094-1;Parent=rna-O5D79_005094;Dbxref=RFAM:RF02541;end_range=479,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_005094;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region DALFDJ020000075.1 1 411 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000075.1 tpg region 1 411 . + . ID=DALFDJ020000075.1:1..411;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000075.1 tpg gene 1 411 . + . ID=gene-O5D79_005095;Name=O5D79_005095;end_range=411,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005095;partial=true;start_range=.,1 DALFDJ020000075.1 Protein Homology CDS 1 411 . + 1 ID=cds-HJH9166440.1;Parent=gene-O5D79_005095;Dbxref=NCBI_GP:HJH9166440.1;Name=HJH9166440.1;end_range=411,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211874.1;locus_tag=O5D79_005095;partial=true;product=toprim domain-containing protein;protein_id=HJH9166440.1;start_range=.,1;transl_table=11 ##sequence-region DALFDJ020000076.1 1 399 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000076.1 tpg region 1 399 . + . ID=DALFDJ020000076.1:1..399;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000076.1 tpg gene 162 399 . + . ID=gene-O5D79_005096;Name=O5D79_005096;end_range=399,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005096;partial=true DALFDJ020000076.1 Protein Homology CDS 162 399 . + 0 ID=cds-HJH9166441.1;Parent=gene-O5D79_005096;Dbxref=NCBI_GP:HJH9166441.1;Name=HJH9166441.1;end_range=399,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001075579.1;locus_tag=O5D79_005096;partial=true;product=DUF5375 family protein;protein_id=HJH9166441.1;transl_table=11 ##sequence-region DALFDJ020000077.1 1 393 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000077.1 tpg region 1 393 . + . ID=DALFDJ020000077.1:1..393;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000077.1 tpg gene 1 393 . + . ID=gene-O5D79_005097;Name=O5D79_005097;end_range=393,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005097;partial=true;start_range=.,1 DALFDJ020000077.1 Protein Homology CDS 1 393 . + 0 ID=cds-HJH9166442.1;Parent=gene-O5D79_005097;Dbxref=NCBI_GP:HJH9166442.1;Name=HJH9166442.1;Ontology_term=GO:0003899,GO:0004386,GO:0008270;end_range=393,.;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA,helicase activity|0004386||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211874.1;locus_tag=O5D79_005097;partial=true;product=primase-helicase zinc-binding domain-containing protein;protein_id=HJH9166442.1;start_range=.,1;transl_table=11 ##sequence-region DALFDJ020000078.1 1 370 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000078.1 tpg region 1 370 . + . ID=DALFDJ020000078.1:1..370;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000078.1 tpg gene 1 370 . + . ID=gene-O5D79_005098;Name=O5D79_005098;end_range=370,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=O5D79_005098;partial=true;start_range=.,1 DALFDJ020000078.1 cmsearch rRNA 1 370 . + . ID=rna-O5D79_005098;Parent=gene-O5D79_005098;Dbxref=RFAM:RF00177;end_range=370,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_005098;partial=true;product=16S ribosomal RNA;start_range=.,1 DALFDJ020000078.1 cmsearch exon 1 370 . + . ID=exon-O5D79_005098-1;Parent=rna-O5D79_005098;Dbxref=RFAM:RF00177;end_range=370,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=O5D79_005098;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region DALFDJ020000079.1 1 24063 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000079.1 tpg region 1 24063 . + . ID=DALFDJ020000079.1:1..24063;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000079.1 tpg gene 212 1489 . + . ID=gene-O5D79_005099;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=O5D79_005099 DALFDJ020000079.1 Protein Homology CDS 212 1489 . + 0 ID=cds-HJH9166443.1;Parent=gene-O5D79_005099;Dbxref=NCBI_GP:HJH9166443.1;Name=HJH9166443.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462624.1;locus_tag=O5D79_005099;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=HJH9166443.1;transl_table=11 DALFDJ020000079.1 tpg gene 1498 1977 . + . ID=gene-O5D79_005100;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=O5D79_005100 DALFDJ020000079.1 Protein Homology CDS 1498 1977 . + 0 ID=cds-HJH9166444.1;Parent=gene-O5D79_005100;Dbxref=NCBI_GP:HJH9166444.1;Name=HJH9166444.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462625.1;locus_tag=O5D79_005100;product=pantetheine-phosphate adenylyltransferase;protein_id=HJH9166444.1;transl_table=11 DALFDJ020000079.1 tpg gene 2005 2814 . - . ID=gene-O5D79_005101;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=O5D79_005101 DALFDJ020000079.1 Protein Homology CDS 2005 2814 . - 0 ID=cds-HJH9166445.1;Parent=gene-O5D79_005101;Dbxref=NCBI_GP:HJH9166445.1;Name=HJH9166445.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462626.1;locus_tag=O5D79_005101;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=HJH9166445.1;transl_table=11 DALFDJ020000079.1 tpg gene 2912 3079 . - . ID=gene-O5D79_005102;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=O5D79_005102 DALFDJ020000079.1 Protein Homology CDS 2912 3079 . - 0 ID=cds-HJH9166446.1;Parent=gene-O5D79_005102;Dbxref=NCBI_GP:HJH9166446.1;Name=HJH9166446.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=O5D79_005102;product=50S ribosomal protein L33;protein_id=HJH9166446.1;transl_table=11 DALFDJ020000079.1 tpg gene 3100 3336 . - . ID=gene-O5D79_005103;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=O5D79_005103 DALFDJ020000079.1 Protein Homology CDS 3100 3336 . - 0 ID=cds-HJH9166447.1;Parent=gene-O5D79_005103;Dbxref=NCBI_GP:HJH9166447.1;Name=HJH9166447.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=O5D79_005103;product=50S ribosomal protein L28;protein_id=HJH9166447.1;transl_table=11 DALFDJ020000079.1 tpg gene 3554 4219 . - . ID=gene-O5D79_005104;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=O5D79_005104 DALFDJ020000079.1 Protein Homology CDS 3554 4219 . - 0 ID=cds-HJH9166448.1;Parent=gene-O5D79_005104;Dbxref=NCBI_GP:HJH9166448.1;Name=HJH9166448.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462629.1;locus_tag=O5D79_005104;product=RadC family protein;protein_id=HJH9166448.1;transl_table=11 DALFDJ020000079.1 tpg gene 4395 5615 . + . ID=gene-O5D79_005105;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=O5D79_005105 DALFDJ020000079.1 Protein Homology CDS 4395 5615 . + 0 ID=cds-HJH9166449.1;Parent=gene-O5D79_005105;Dbxref=NCBI_GP:HJH9166449.1;Name=HJH9166449.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=O5D79_005105;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=HJH9166449.1;transl_table=11 DALFDJ020000079.1 tpg gene 5593 6051 . + . ID=gene-O5D79_005106;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=O5D79_005106 DALFDJ020000079.1 Protein Homology CDS 5593 6051 . + 0 ID=cds-HJH9166450.1;Parent=gene-O5D79_005106;Dbxref=NCBI_GP:HJH9166450.1;Name=HJH9166450.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=O5D79_005106;product=dUTP diphosphatase;protein_id=HJH9166450.1;transl_table=11 DALFDJ020000079.1 tpg gene 6159 6755 . + . ID=gene-O5D79_005107;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=O5D79_005107 DALFDJ020000079.1 Protein Homology CDS 6159 6755 . + 0 ID=cds-HJH9166451.1;Parent=gene-O5D79_005107;Dbxref=NCBI_GP:HJH9166451.1;Name=HJH9166451.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=O5D79_005107;product=nucleoid occlusion factor SlmA;protein_id=HJH9166451.1;transl_table=11 DALFDJ020000079.1 tpg gene 6833 7474 . - . ID=gene-O5D79_005108;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=O5D79_005108 DALFDJ020000079.1 Protein Homology CDS 6833 7474 . - 0 ID=cds-HJH9166452.1;Parent=gene-O5D79_005108;Dbxref=NCBI_GP:HJH9166452.1;Name=HJH9166452.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462633.1;locus_tag=O5D79_005108;product=orotate phosphoribosyltransferase;protein_id=HJH9166452.1;transl_table=11 DALFDJ020000079.1 tpg gene 7553 8269 . - . ID=gene-O5D79_005109;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=O5D79_005109 DALFDJ020000079.1 Protein Homology CDS 7553 8269 . - 0 ID=cds-HJH9166453.1;Parent=gene-O5D79_005109;Dbxref=NCBI_GP:HJH9166453.1;Name=HJH9166453.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=O5D79_005109;product=ribonuclease PH;protein_id=HJH9166453.1;transl_table=11 DALFDJ020000079.1 tpg gene 8395 9258 . + . ID=gene-O5D79_005110;Name=O5D79_005110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005110 DALFDJ020000079.1 Protein Homology CDS 8395 9258 . + 0 ID=cds-HJH9166454.1;Parent=gene-O5D79_005110;Dbxref=NCBI_GP:HJH9166454.1;Name=HJH9166454.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=O5D79_005110;product=YicC/YloC family endoribonuclease;protein_id=HJH9166454.1;transl_table=11 DALFDJ020000079.1 tpg gene 9308 10210 . - . ID=gene-O5D79_005111;Name=O5D79_005111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005111 DALFDJ020000079.1 Protein Homology CDS 9308 10210 . - 0 ID=cds-HJH9166455.1;Parent=gene-O5D79_005111;Dbxref=NCBI_GP:HJH9166455.1;Name=HJH9166455.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462636.1;locus_tag=O5D79_005111;product=LysR family transcriptional regulator;protein_id=HJH9166455.1;transl_table=11 DALFDJ020000079.1 tpg gene 10284 11168 . + . ID=gene-O5D79_005112;Name=O5D79_005112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005112 DALFDJ020000079.1 Protein Homology CDS 10284 11168 . + 0 ID=cds-HJH9166456.1;Parent=gene-O5D79_005112;Dbxref=NCBI_GP:HJH9166456.1;Name=HJH9166456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001083230.1;locus_tag=O5D79_005112;product=HARLDQ motif MBL-fold protein;protein_id=HJH9166456.1;transl_table=11 DALFDJ020000079.1 tpg gene 11416 12033 . + . ID=gene-O5D79_005113;Name=O5D79_005113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005113 DALFDJ020000079.1 Protein Homology CDS 11416 12033 . + 0 ID=cds-HJH9166457.1;Parent=gene-O5D79_005113;Dbxref=NCBI_GP:HJH9166457.1;Name=HJH9166457.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462638.1;locus_tag=O5D79_005113;product=trimeric intracellular cation channel family protein;protein_id=HJH9166457.1;transl_table=11 DALFDJ020000079.1 tpg gene 12030 13715 . - . ID=gene-O5D79_005114;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=O5D79_005114 DALFDJ020000079.1 Protein Homology CDS 12030 13715 . - 0 ID=cds-HJH9166458.1;Parent=gene-O5D79_005114;Dbxref=NCBI_GP:HJH9166458.1;Name=HJH9166458.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462639.1;locus_tag=O5D79_005114;product=NAD-dependent DNA ligase LigB;protein_id=HJH9166458.1;transl_table=11 DALFDJ020000079.1 tpg gene 13972 14595 . + . ID=gene-O5D79_005115;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=O5D79_005115 DALFDJ020000079.1 Protein Homology CDS 13972 14595 . + 0 ID=cds-HJH9166459.1;Parent=gene-O5D79_005115;Dbxref=NCBI_GP:HJH9166459.1;Name=HJH9166459.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=O5D79_005115;product=guanylate kinase;protein_id=HJH9166459.1;transl_table=11 DALFDJ020000079.1 tpg gene 14650 14925 . + . ID=gene-O5D79_005116;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=O5D79_005116 DALFDJ020000079.1 Protein Homology CDS 14650 14925 . + 0 ID=cds-HJH9166460.1;Parent=gene-O5D79_005116;Dbxref=NCBI_GP:HJH9166460.1;Name=HJH9166460.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=O5D79_005116;product=DNA-directed RNA polymerase subunit omega;protein_id=HJH9166460.1;transl_table=11 DALFDJ020000079.1 tpg gene 14944 17055 . + . ID=gene-O5D79_005117;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=O5D79_005117 DALFDJ020000079.1 Protein Homology CDS 14944 17055 . + 0 ID=cds-HJH9166461.1;Parent=gene-O5D79_005117;Dbxref=NCBI_GP:HJH9166461.1;Name=HJH9166461.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462642.1;locus_tag=O5D79_005117;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=HJH9166461.1;transl_table=11 DALFDJ020000079.1 tpg gene 17060 17749 . + . ID=gene-O5D79_005118;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=O5D79_005118 DALFDJ020000079.1 Protein Homology CDS 17060 17749 . + 0 ID=cds-HJH9166462.1;Parent=gene-O5D79_005118;Dbxref=NCBI_GP:HJH9166462.1;Name=HJH9166462.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462643.1;locus_tag=O5D79_005118;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=HJH9166462.1;transl_table=11 DALFDJ020000079.1 tpg gene 17755 19836 . + . ID=gene-O5D79_005119;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=O5D79_005119 DALFDJ020000079.1 Protein Homology CDS 17755 19836 . + 0 ID=cds-HJH9166463.1;Parent=gene-O5D79_005119;Dbxref=NCBI_GP:HJH9166463.1;Name=HJH9166463.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=O5D79_005119;product=ATP-dependent DNA helicase RecG;protein_id=HJH9166463.1;transl_table=11 DALFDJ020000079.1 tpg gene 19839 20690 . - . ID=gene-O5D79_005120;Name=O5D79_005120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005120 DALFDJ020000079.1 Protein Homology CDS 19839 20690 . - 0 ID=cds-HJH9166464.1;Parent=gene-O5D79_005120;Dbxref=NCBI_GP:HJH9166464.1;Name=HJH9166464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462645.1;locus_tag=O5D79_005120;product=hypothetical protein;protein_id=HJH9166464.1;transl_table=11 DALFDJ020000079.1 tpg gene 20693 21898 . - . ID=gene-O5D79_005121;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=O5D79_005121 DALFDJ020000079.1 Protein Homology CDS 20693 21898 . - 0 ID=cds-HJH9166465.1;Parent=gene-O5D79_005121;Dbxref=NCBI_GP:HJH9166465.1;Name=HJH9166465.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462646.1;locus_tag=O5D79_005121;product=sodium/glutamate symporter;protein_id=HJH9166465.1;transl_table=11 DALFDJ020000079.1 tpg gene 22126 23517 . + . ID=gene-O5D79_005122;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=O5D79_005122 DALFDJ020000079.1 Protein Homology CDS 22126 23517 . + 0 ID=cds-HJH9166466.1;Parent=gene-O5D79_005122;Dbxref=NCBI_GP:HJH9166466.1;Name=HJH9166466.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462647.1;locus_tag=O5D79_005122;product=xanthine/proton symporter XanP;protein_id=HJH9166466.1;transl_table=11 DALFDJ020000079.1 tpg gene 23638 24063 . + . ID=gene-O5D79_005123;Name=O5D79_005123;end_range=24063,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005123;partial=true DALFDJ020000079.1 Protein Homology CDS 23638 24063 . + 0 ID=cds-HJH9166467.1;Parent=gene-O5D79_005123;Dbxref=NCBI_GP:HJH9166467.1;Name=HJH9166467.1;end_range=24063,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462648.1;locus_tag=O5D79_005123;partial=true;product=AsmA family protein;protein_id=HJH9166467.1;transl_table=11 ##sequence-region DALFDJ020000080.1 1 5383 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000080.1 tpg region 1 5383 . + . ID=DALFDJ020000080.1:1..5383;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000080.1 tpg gene 1 566 . + . ID=gene-O5D79_005124;Name=O5D79_005124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005124;partial=true;start_range=.,1 DALFDJ020000080.1 Protein Homology CDS 1 566 . + 2 ID=cds-HJH9166468.1;Parent=gene-O5D79_005124;Dbxref=NCBI_GP:HJH9166468.1;Name=HJH9166468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460576.1;locus_tag=O5D79_005124;partial=true;product=ribulose-phosphate 3 epimerase family protein;protein_id=HJH9166468.1;start_range=.,1;transl_table=11 DALFDJ020000080.1 tpg gene 582 1373 . + . ID=gene-O5D79_005125;Name=O5D79_005125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005125 DALFDJ020000080.1 Protein Homology CDS 582 1373 . + 0 ID=cds-HJH9166469.1;Parent=gene-O5D79_005125;Dbxref=NCBI_GP:HJH9166469.1;Name=HJH9166469.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460577.1;locus_tag=O5D79_005125;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=HJH9166469.1;transl_table=11 DALFDJ020000080.1 tpg gene 1373 1810 . + . ID=gene-O5D79_005126;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=protein_coding;locus_tag=O5D79_005126 DALFDJ020000080.1 Protein Homology CDS 1373 1810 . + 0 ID=cds-HJH9166470.1;Parent=gene-O5D79_005126;Dbxref=NCBI_GP:HJH9166470.1;Name=HJH9166470.1;gbkey=CDS;gene=aac(6');inference=COORDINATES: similar to AA sequence:RefSeq:NP_460578.1;locus_tag=O5D79_005126;product=cryptic aminoglycoside N-acetyltransferase AAC(6')-Iy/Iaa;protein_id=HJH9166470.1;transl_table=11 DALFDJ020000080.1 tpg gene 1951 3204 . - . ID=gene-O5D79_005127;Name=O5D79_005127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005127 DALFDJ020000080.1 Protein Homology CDS 1951 3204 . - 0 ID=cds-HJH9166471.1;Parent=gene-O5D79_005127;Dbxref=NCBI_GP:HJH9166471.1;Name=HJH9166471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000067287.1;locus_tag=O5D79_005127;product=enolase C-terminal domain-like protein;protein_id=HJH9166471.1;transl_table=11 DALFDJ020000080.1 tpg gene 3542 4309 . + . ID=gene-O5D79_005128;Name=O5D79_005128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005128 DALFDJ020000080.1 Protein Homology CDS 3542 4309 . + 0 ID=cds-HJH9166472.1;Parent=gene-O5D79_005128;Dbxref=NCBI_GP:HJH9166472.1;Name=HJH9166472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894239.1;locus_tag=O5D79_005128;product=SDR family oxidoreductase;protein_id=HJH9166472.1;transl_table=11 DALFDJ020000080.1 tpg gene 4393 5383 . + . ID=gene-O5D79_005129;Name=O5D79_005129;end_range=5383,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005129;partial=true DALFDJ020000080.1 Protein Homology CDS 4393 5383 . + 0 ID=cds-HJH9166473.1;Parent=gene-O5D79_005129;Dbxref=NCBI_GP:HJH9166473.1;Name=HJH9166473.1;Ontology_term=GO:0055085,GO:0022857;end_range=5383,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000648132.1;locus_tag=O5D79_005129;partial=true;product=MFS transporter;protein_id=HJH9166473.1;transl_table=11 ##sequence-region DALFDJ020000081.1 1 2685 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2564799 DALFDJ020000081.1 tpg region 1 2685 . + . ID=DALFDJ020000081.1:1..2685;Dbxref=taxon:2564799;collection-date=2018;country=Nigeria;gbkey=Src;isolate=Salmonella;isolation-source=Clinical/host-associated;lat-lon=6.5359 N 3.2483 E;mol_type=genomic DNA;nat-host=Bos taurus;serovar=Mokola;strain=19CS0270;sub-species=enterica DALFDJ020000081.1 tpg gene 102 890 . + . ID=gene-O5D79_005130;Name=aadA;gbkey=Gene;gene=aadA;gene_biotype=protein_coding;locus_tag=O5D79_005130 DALFDJ020000081.1 Protein Homology CDS 102 890 . + 0 ID=cds-HJH9166474.1;Parent=gene-O5D79_005130;Dbxref=NCBI_GP:HJH9166474.1;Name=HJH9166474.1;gbkey=CDS;gene=aadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460230.1;locus_tag=O5D79_005130;product=cryptic aminoglycoside nucleotidyltransferase ANT(3'')/ANT(9);protein_id=HJH9166474.1;transl_table=11 DALFDJ020000081.1 tpg gene 1035 1628 . + . ID=gene-O5D79_005131;Name=O5D79_005131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005131 DALFDJ020000081.1 Protein Homology CDS 1035 1628 . + 0 ID=cds-HJH9166475.1;Parent=gene-O5D79_005131;Dbxref=NCBI_GP:HJH9166475.1;Name=HJH9166475.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460231.1;locus_tag=O5D79_005131;product=helix-turn-helix domain-containing protein;protein_id=HJH9166475.1;transl_table=11 DALFDJ020000081.1 tpg gene 1697 2545 . + . ID=gene-O5D79_005132;Name=O5D79_005132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=O5D79_005132 DALFDJ020000081.1 Protein Homology CDS 1697 2545 . + 0 ID=cds-HJH9166476.1;Parent=gene-O5D79_005132;Dbxref=NCBI_GP:HJH9166476.1;Name=HJH9166476.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460232.1;locus_tag=O5D79_005132;product=MerR family transcriptional regulator;protein_id=HJH9166476.1;transl_table=11 ###